CFF04554_RS07895 bfc95c93fafc0a7f87e069d068024bb5 227 PANTHER PTHR10108 44 200 1.5E-12 T 23-04-2016 CFF04554_RS07895 bfc95c93fafc0a7f87e069d068024bb5 227 Pfam PF13649 Methyltransferase domain 46 144 4.3E-15 T 23-04-2016 CFF04554_RS07895 bfc95c93fafc0a7f87e069d068024bb5 227 PANTHER PTHR10108:SF779 44 200 1.5E-12 T 23-04-2016 CFF04554_RS07895 bfc95c93fafc0a7f87e069d068024bb5 227 Gene3D G3DSA:3.40.50.150 41 226 1.1E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS07895 bfc95c93fafc0a7f87e069d068024bb5 227 SUPERFAMILY SSF53335 29 210 4.07E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03285 dec2ece1d7c8ae234f506d1d6e12b11d 271 SUPERFAMILY SSF140931 74 245 3.66E-23 T 23-04-2016 IPR003812 Fido domain CFF04554_RS03285 dec2ece1d7c8ae234f506d1d6e12b11d 271 PANTHER PTHR39560:SF1 21 266 2.4E-19 T 23-04-2016 CFF04554_RS03285 dec2ece1d7c8ae234f506d1d6e12b11d 271 Gene3D G3DSA:1.10.3290.10 61 253 4.4E-29 T 23-04-2016 IPR003812 Fido domain CFF04554_RS03285 dec2ece1d7c8ae234f506d1d6e12b11d 271 Pfam PF02661 Fic/DOC family 84 194 2.7E-13 T 23-04-2016 IPR003812 Fido domain CFF04554_RS03285 dec2ece1d7c8ae234f506d1d6e12b11d 271 PANTHER PTHR39560 21 266 2.4E-19 T 23-04-2016 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 288 496 2.9E-42 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 Pfam PF03129 Anticodon binding domain 509 598 7.6E-22 T 23-04-2016 IPR004154 Anticodon-binding CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 SUPERFAMILY SSF55186 31 209 1.06E-49 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 SMART SM00863 138 187 4.0E-18 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 Gene3D G3DSA:3.40.50.800 500 603 7.4E-31 T 23-04-2016 IPR004154 Anticodon-binding CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 Gene3D G3DSA:3.30.980.10 34 101 1.5E-32 T 23-04-2016 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 Gene3D G3DSA:3.30.980.10 156 191 1.5E-32 T 23-04-2016 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 SUPERFAMILY SSF55681 211 494 8.81E-88 T 23-04-2016 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 40 599 3.4E-209 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 SUPERFAMILY SSF52954 495 602 1.16E-28 T 23-04-2016 IPR004154 Anticodon-binding CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 138 187 9.4E-11 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 354 1.1E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 298 326 1.1E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 432 460 1.1E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 502 514 1.1E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 PRINTS PR01047 Threonyl-tRNA synthetase signature 475 488 1.1E-52 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 34 602 32.639 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 Gene3D G3DSA:3.30.54.20 103 155 1.0E-10 T 23-04-2016 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 Gene3D G3DSA:3.30.930.10 210 496 2.8E-109 T 23-04-2016 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 PANTHER PTHR11451 2 604 1.2E-245 T 23-04-2016 CFF04554_RS08590 5aa11a7199dd924017c458401e193913 605 PANTHER PTHR11451:SF5 2 604 1.2E-245 T 23-04-2016 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 PIRSF PIRSF002133 1 124 5.2E-53 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 Pfam PF00164 Ribosomal protein S12/S23 3 123 1.3E-41 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 5.6E-69 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 Gene3D G3DSA:2.40.50.140 2 125 2.0E-63 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.712 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 SUPERFAMILY SSF50249 2 124 1.11E-50 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 PANTHER PTHR11652 2 116 1.5E-68 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06715 2b852f3f103a25304b859e042b584170 127 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 82 21.127 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 7.4E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 7.4E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 7.4E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.5E-30 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 SUPERFAMILY SSF50249 6 81 1.71E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 23-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 PANTHER PTHR10744 7 85 1.8E-24 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 Pfam PF00366 Ribosomal protein S17 11 76 5.1E-27 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 74 7.0E-26 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00210 266e09df7fc86ff00241170526fdec8e 85 Gene3D G3DSA:2.40.50.140 6 82 1.2E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 Gene3D G3DSA:3.40.50.970 359 557 1.8E-72 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 PANTHER PTHR18968 3 558 1.0E-290 T 23-04-2016 CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 PANTHER PTHR18968:SF116 3 558 1.0E-290 T 23-04-2016 CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 Gene3D G3DSA:3.40.50.970 2 179 1.5E-72 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 SUPERFAMILY SSF52518 356 556 2.68E-68 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 167 2.3E-58 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 534 3.3E-49 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 Gene3D G3DSA:3.40.50.1220 187 358 1.3E-62 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 SUPERFAMILY SSF52467 186 355 2.24E-60 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 557 4.1E-237 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 SUPERFAMILY SSF52518 2 185 3.95E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04095 d63268aeb330afbd3c66142709c225a7 558 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 329 9.4E-46 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 340 496 3.2E-35 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 PANTHER PTHR23115:SF184 691 833 1.5E-191 T 23-04-2016 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 PANTHER PTHR23115:SF184 324 665 1.5E-191 T 23-04-2016 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 Gene3D G3DSA:3.40.50.300 334 496 3.4E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 Pfam PF00009 Elongation factor Tu GTP binding domain 341 497 2.9E-33 T 23-04-2016 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 PANTHER PTHR23115 691 833 1.5E-191 T 23-04-2016 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 PANTHER PTHR23115 324 665 1.5E-191 T 23-04-2016 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 255 835 1.7E-254 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 SUPERFAMILY SSF50447 740 833 9.82E-31 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 Gene3D G3DSA:2.40.30.10 508 601 1.3E-20 T 23-04-2016 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 SUPERFAMILY SSF52156 614 745 1.19E-35 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 Gene3D G3DSA:3.40.50.10050 638 717 6.3E-26 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 SUPERFAMILY SSF50447 509 592 2.55E-21 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 259 310 2.5E-12 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 6.5E-15 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 Gene3D G3DSA:2.40.30.10 741 835 4.8E-36 T 23-04-2016 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 836 16.681 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 ProSitePatterns PS01176 Initiation factor 2 signature. 789 811 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 SUPERFAMILY SSF52540 321 509 3.38E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07600 f1c4fe877f926f0687576ec5b34d30e8 838 Pfam PF11987 Translation-initiation factor 2 624 728 1.6E-37 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CFF04554_RS07550 589e5f78a261f9cb26248b84cb7ea6ed 317 SUPERFAMILY SSF81342 92 306 2.2E-39 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CFF04554_RS07550 589e5f78a261f9cb26248b84cb7ea6ed 317 Pfam PF01292 Prokaryotic cytochrome b561 99 280 1.9E-21 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CFF04554_RS07550 589e5f78a261f9cb26248b84cb7ea6ed 317 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 95 301 2.4E-71 T 23-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CFF04554_RS07550 589e5f78a261f9cb26248b84cb7ea6ed 317 PANTHER PTHR30074 59 317 2.2E-18 T 23-04-2016 CFF04554_RS07550 589e5f78a261f9cb26248b84cb7ea6ed 317 Gene3D G3DSA:1.20.950.20 92 306 5.4E-52 T 23-04-2016 CFF04554_RS07550 589e5f78a261f9cb26248b84cb7ea6ed 317 PANTHER PTHR30074:SF2 59 317 2.2E-18 T 23-04-2016 CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 1.4E-32 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.4E-32 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 1.4E-32 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.4E-32 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 Gene3D G3DSA:1.10.275.10 1 137 6.3E-62 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 463 86.687 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 Gene3D G3DSA:1.20.200.10 138 417 1.2E-99 T 23-04-2016 CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 SUPERFAMILY SSF48557 3 463 5.81E-150 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 Pfam PF00206 Lyase 11 343 1.5E-108 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 Pfam PF10415 Fumarase C C-terminus 409 461 7.5E-27 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 461 2.7E-230 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 Gene3D G3DSA:1.10.40.30 418 464 7.6E-33 T 23-04-2016 CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 PANTHER PTHR11444:SF1 1 464 3.0E-243 T 23-04-2016 CFF04554_RS04810 b9a43071c298a43a0e938ef32a0cada4 465 PANTHER PTHR11444 1 464 3.0E-243 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS00485 4cbd5e819a991a2f9cb4356b4343b96a 99 ProDom PD351196 CJ1463 JHP0230 HP0245 27 98 2.0E-26 T 23-04-2016 CFF04554_RS00485 4cbd5e819a991a2f9cb4356b4343b96a 99 Pfam PF10135 Rod binding protein 55 92 6.0E-6 T 23-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal CFF04554_RS00485 4cbd5e819a991a2f9cb4356b4343b96a 99 PIRSF PIRSF007248 1 99 1.0E-39 T 23-04-2016 IPR016511 Uncharacterised conserved protein UCP007248 CFF04554_RS04735 49b7e9db3d08d33acdb819a95fb51df5 221 Gene3D G3DSA:3.40.50.880 1 220 3.8E-39 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS04735 49b7e9db3d08d33acdb819a95fb51df5 221 SUPERFAMILY SSF52317 1 219 6.74E-71 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS04735 49b7e9db3d08d33acdb819a95fb51df5 221 SMART SM01211 1 221 8.1E-112 T 23-04-2016 CFF04554_RS04735 49b7e9db3d08d33acdb819a95fb51df5 221 PANTHER PTHR10099 1 220 9.6E-104 T 23-04-2016 CFF04554_RS04735 49b7e9db3d08d33acdb819a95fb51df5 221 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 220 5.9E-92 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS04735 49b7e9db3d08d33acdb819a95fb51df5 221 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 221 41.008 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS04735 49b7e9db3d08d33acdb819a95fb51df5 221 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 206 5.8E-46 T 23-04-2016 CFF04554_RS04735 49b7e9db3d08d33acdb819a95fb51df5 221 PIRSF PIRSF001586 1 221 1.2E-80 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS05450 db40fd8a33335514a73e9944cecdfea8 333 PANTHER PTHR24220:SF150 5 300 4.4E-118 T 23-04-2016 CFF04554_RS05450 db40fd8a33335514a73e9944cecdfea8 333 Gene3D G3DSA:3.40.50.300 4 235 5.7E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05450 db40fd8a33335514a73e9944cecdfea8 333 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS05450 db40fd8a33335514a73e9944cecdfea8 333 SUPERFAMILY SSF52540 4 241 1.12E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05450 db40fd8a33335514a73e9944cecdfea8 333 PANTHER PTHR24220 5 300 4.4E-118 T 23-04-2016 CFF04554_RS05450 db40fd8a33335514a73e9944cecdfea8 333 SMART SM00382 28 211 1.5E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS05450 db40fd8a33335514a73e9944cecdfea8 333 Pfam PF08402 TOBE domain 257 321 1.6E-7 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CFF04554_RS05450 db40fd8a33335514a73e9944cecdfea8 333 SUPERFAMILY SSF50331 242 326 2.89E-9 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CFF04554_RS05450 db40fd8a33335514a73e9944cecdfea8 333 Pfam PF00005 ABC transporter 20 161 1.3E-39 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 PANTHER PTHR15680 1 118 3.1E-41 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 SUPERFAMILY SSF50104 2 117 5.42E-40 T 23-04-2016 IPR008991 Translation protein SH3-like domain CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 PIRSF PIRSF002191 1 118 1.6E-43 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 Pfam PF01245 Ribosomal protein L19 5 115 1.2E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 116 3.6E-45 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.0E-34 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.0E-34 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.0E-34 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05125 23846c52ad94ee6a515a249a9e70c15b 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 117 30.544 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05760 e773f75c27ca6fe5fc23a79d9aacd2c7 205 SUPERFAMILY SSF52540 32 140 3.19E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05760 e773f75c27ca6fe5fc23a79d9aacd2c7 205 Gene3D G3DSA:3.40.50.300 33 104 1.9E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05760 e773f75c27ca6fe5fc23a79d9aacd2c7 205 PANTHER PTHR11669:SF8 24 102 5.6E-12 T 23-04-2016 CFF04554_RS05760 e773f75c27ca6fe5fc23a79d9aacd2c7 205 Pfam PF13177 DNA polymerase III, delta subunit 36 105 7.3E-15 T 23-04-2016 CFF04554_RS05760 e773f75c27ca6fe5fc23a79d9aacd2c7 205 PANTHER PTHR11669 24 102 5.6E-12 T 23-04-2016 CFF04554_RS00635 3797fd2104ca1e376e698cff90458410 176 PANTHER PTHR10849 3 147 6.6E-36 T 23-04-2016 CFF04554_RS00635 3797fd2104ca1e376e698cff90458410 176 PANTHER PTHR10849:SF11 3 147 6.6E-36 T 23-04-2016 CFF04554_RS00635 3797fd2104ca1e376e698cff90458410 176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00635 3797fd2104ca1e376e698cff90458410 176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 74 85 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00635 3797fd2104ca1e376e698cff90458410 176 Gene3D G3DSA:3.30.70.20 6 82 2.7E-16 T 23-04-2016 CFF04554_RS00635 3797fd2104ca1e376e698cff90458410 176 Pfam PF12838 4Fe-4S dicluster domain 39 88 2.3E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00635 3797fd2104ca1e376e698cff90458410 176 SUPERFAMILY SSF54862 17 99 2.51E-19 T 23-04-2016 CFF04554_RS00635 3797fd2104ca1e376e698cff90458410 176 Gene3D G3DSA:3.30.70.20 83 123 1.6E-5 T 23-04-2016 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 184 25.912 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 Pfam PF01330 RuvA N terminal domain 1 62 1.3E-14 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 183 9.8E-43 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 PANTHER PTHR33796 2 184 1.6E-45 T 23-04-2016 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.0E-14 T 23-04-2016 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 Gene3D G3DSA:1.10.150.20 68 130 3.6E-21 T 23-04-2016 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 SUPERFAMILY SSF46929 141 183 1.83E-6 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 SUPERFAMILY SSF47781 67 132 2.92E-17 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 Gene3D G3DSA:1.10.8.10 141 184 1.0E-8 T 23-04-2016 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 SMART SM00278 108 127 3.9 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 SMART SM00278 73 92 140.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 SUPERFAMILY SSF50249 1 63 8.0E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 Pfam PF07499 RuvA, C-terminal domain 144 183 4.1E-9 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CFF04554_RS04050 5efa3f9e9f851e2b5d80dd44b59916d6 184 Gene3D G3DSA:2.40.50.140 1 64 9.8E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05810 ccd0aaceee84d498826d8c5207280acf 125 SMART SM00732 1 97 5.8E-13 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CFF04554_RS05810 ccd0aaceee84d498826d8c5207280acf 125 Pfam PF03652 Holliday junction resolvase 3 123 2.1E-22 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CFF04554_RS05810 ccd0aaceee84d498826d8c5207280acf 125 SUPERFAMILY SSF53098 3 123 2.58E-22 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS05810 ccd0aaceee84d498826d8c5207280acf 125 Gene3D G3DSA:3.30.420.140 3 123 1.7E-26 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CFF04554_RS05810 ccd0aaceee84d498826d8c5207280acf 125 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 125 14.377 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CFF04554_RS09090 908a09e930783616023085ca7af3a92f 252 SUPERFAMILY SSF51366 5 251 1.57E-85 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CFF04554_RS09090 908a09e930783616023085ca7af3a92f 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 4 251 2.3E-112 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CFF04554_RS09090 908a09e930783616023085ca7af3a92f 252 PANTHER PTHR21235 5 252 1.4E-126 T 23-04-2016 CFF04554_RS09090 908a09e930783616023085ca7af3a92f 252 Pfam PF00977 Histidine biosynthesis protein 7 234 1.2E-90 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 CFF04554_RS09090 908a09e930783616023085ca7af3a92f 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 3 251 48.281 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CFF04554_RS09090 908a09e930783616023085ca7af3a92f 252 PANTHER PTHR21235:SF2 5 252 1.4E-126 T 23-04-2016 CFF04554_RS09090 908a09e930783616023085ca7af3a92f 252 Gene3D G3DSA:3.20.20.70 6 252 1.3E-105 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS00305 15f2664656042e75d4d4557c64dd8270 88 PANTHER PTHR11178 20 68 9.3E-12 T 23-04-2016 CFF04554_RS00305 15f2664656042e75d4d4557c64dd8270 88 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 21 78 1.0E-20 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CFF04554_RS00305 15f2664656042e75d4d4557c64dd8270 88 Pfam PF01106 NifU-like domain 13 77 2.3E-21 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CFF04554_RS00305 15f2664656042e75d4d4557c64dd8270 88 SUPERFAMILY SSF117916 3 80 1.44E-23 T 23-04-2016 CFF04554_RS04655 a559ed2bd47329ae5c3f72a48cc96e9f 362 PIRSF PIRSF005622 1 362 4.1E-156 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CFF04554_RS04655 a559ed2bd47329ae5c3f72a48cc96e9f 362 PANTHER PTHR30149 2 358 3.5E-177 T 23-04-2016 CFF04554_RS04655 a559ed2bd47329ae5c3f72a48cc96e9f 362 PANTHER PTHR30149:SF0 2 358 3.5E-177 T 23-04-2016 CFF04554_RS04655 a559ed2bd47329ae5c3f72a48cc96e9f 362 Pfam PF01924 Hydrogenase formation hypA family 16 358 1.3E-147 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CFF04554_RS04655 a559ed2bd47329ae5c3f72a48cc96e9f 362 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 4 360 7.6E-147 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CFF04554_RS03495 75af6909c7f202fed03408d14d9a72ec 388 PANTHER PTHR21666 139 336 1.8E-43 T 23-04-2016 CFF04554_RS03495 75af6909c7f202fed03408d14d9a72ec 388 Pfam PF01551 Peptidase family M23 240 336 2.2E-34 T 23-04-2016 IPR016047 Peptidase M23 CFF04554_RS03495 75af6909c7f202fed03408d14d9a72ec 388 SUPERFAMILY SSF51261 111 338 2.22E-61 T 23-04-2016 IPR011055 Duplicated hybrid motif CFF04554_RS03495 75af6909c7f202fed03408d14d9a72ec 388 Gene3D G3DSA:2.70.70.10 197 341 1.2E-49 T 23-04-2016 CFF04554_RS03495 75af6909c7f202fed03408d14d9a72ec 388 PANTHER PTHR21666:SF207 139 336 1.8E-43 T 23-04-2016 CFF04554_RS04730 ada9b380c2aa5fcf1e824c75ad777067 76 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 75 19.388 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS04730 ada9b380c2aa5fcf1e824c75ad777067 76 PANTHER PTHR34696 1 73 1.1E-23 T 23-04-2016 CFF04554_RS04730 ada9b380c2aa5fcf1e824c75ad777067 76 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 73 1.5E-26 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS04730 ada9b380c2aa5fcf1e824c75ad777067 76 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 73 4.0E-18 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS04730 ada9b380c2aa5fcf1e824c75ad777067 76 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 73 2.8E-25 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS04730 ada9b380c2aa5fcf1e824c75ad777067 76 SUPERFAMILY SSF82697 1 73 1.45E-24 T 23-04-2016 CFF04554_RS04730 ada9b380c2aa5fcf1e824c75ad777067 76 Gene3D G3DSA:3.30.1280.10 1 73 3.1E-28 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PANTHER PTHR11482:SF36 1 351 1.0E-144 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PANTHER PTHR11482:SF36 419 574 1.0E-144 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 67 329 2.2E-37 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 TIGRFAM TIGR01273 speA: arginine decarboxylase 2 610 8.4E-209 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 SUPERFAMILY SSF50621 386 544 1.36E-14 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 Gene3D G3DSA:3.20.20.10 66 317 4.8E-47 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PIRSF PIRSF001336 1 612 7.7E-207 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 436 537 2.0E-21 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 84 102 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 SUPERFAMILY SSF51419 53 331 7.66E-51 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 Gene3D G3DSA:2.40.37.10 435 564 2.5E-16 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 Gene3D G3DSA:2.40.37.10 318 341 2.5E-16 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 318 337 1.3E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 519 532 1.3E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 84 102 1.3E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 108 120 1.3E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 225 238 1.3E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PANTHER PTHR11482 1 351 1.0E-144 T 23-04-2016 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PANTHER PTHR11482 419 574 1.0E-144 T 23-04-2016 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01180 Arginine decarboxylase signature 131 146 2.8E-40 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01180 Arginine decarboxylase signature 182 204 2.8E-40 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01180 Arginine decarboxylase signature 52 67 2.8E-40 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01180 Arginine decarboxylase signature 469 494 2.8E-40 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01180 Arginine decarboxylase signature 76 90 2.8E-40 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01180 Arginine decarboxylase signature 444 465 2.8E-40 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01180 Arginine decarboxylase signature 308 325 2.8E-40 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS04480 24fad24e83f4786ba09a370b80065658 613 PRINTS PR01180 Arginine decarboxylase signature 519 540 2.8E-40 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CFF04554_RS05180 3c9e8ec319885c6f0cc4bf6ac82a8775 240 PANTHER PTHR13799:SF13 1 240 1.0E-42 T 23-04-2016 CFF04554_RS05180 3c9e8ec319885c6f0cc4bf6ac82a8775 240 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 224 4.0E-58 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CFF04554_RS05180 3c9e8ec319885c6f0cc4bf6ac82a8775 240 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 227 4.2E-49 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CFF04554_RS05180 3c9e8ec319885c6f0cc4bf6ac82a8775 240 PANTHER PTHR13799 1 240 1.0E-42 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CFF04554_RS05180 3c9e8ec319885c6f0cc4bf6ac82a8775 240 Gene3D G3DSA:3.40.1390.30 123 205 8.2E-20 T 23-04-2016 CFF04554_RS05180 3c9e8ec319885c6f0cc4bf6ac82a8775 240 Gene3D G3DSA:3.40.1390.30 2 116 6.5E-30 T 23-04-2016 CFF04554_RS05180 3c9e8ec319885c6f0cc4bf6ac82a8775 240 SUPERFAMILY SSF102705 2 238 1.31E-64 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 TIGRFAM TIGR01027 proB: glutamate 5-kinase 2 251 1.0E-66 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 PIRSF PIRSF000729 1 254 5.4E-71 T 23-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 Gene3D G3DSA:3.40.1160.10 1 246 1.9E-39 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 ProSitePatterns PS00902 Glutamate 5-kinase signature. 200 217 - T 23-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 PANTHER PTHR11063 1 215 2.7E-50 T 23-04-2016 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 PRINTS PR00474 Glutamate 5-kinase family signature 109 130 2.9E-41 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 PRINTS PR00474 Glutamate 5-kinase family signature 69 97 2.9E-41 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 PRINTS PR00474 Glutamate 5-kinase family signature 202 222 2.9E-41 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 PRINTS PR00474 Glutamate 5-kinase family signature 141 168 2.9E-41 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 PRINTS PR00474 Glutamate 5-kinase family signature 37 51 2.9E-41 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 Pfam PF00696 Amino acid kinase family 2 225 1.8E-36 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 SUPERFAMILY SSF53633 2 250 9.56E-58 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 Hamap MF_00456 Glutamate 5-kinase [proB]. 2 253 30.596 T 23-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CFF04554_RS07810 1d269d3598cf667b934df7fbeaeac117 254 PANTHER PTHR11063:SF12 1 215 2.7E-50 T 23-04-2016 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 254 7.8E-21 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 3 254 4.7E-100 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 139 1.4E-9 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 3 28 2.1E-4 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 31 64 1.0E-5 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 PIRSF PIRSF000456 1 260 1.1E-98 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 PANTHER PTHR23416:SF8 1 248 3.3E-100 T 23-04-2016 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 PANTHER PTHR23416 1 248 3.3E-100 T 23-04-2016 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 41.39 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 131 159 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 9 37 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 Gene3D G3DSA:2.160.10.10 2 189 6.0E-45 T 23-04-2016 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 Gene3D G3DSA:1.20.1180.10 194 261 6.0E-23 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CFF04554_RS01575 c0eced8d50aed256143b35749c3b8a99 261 SUPERFAMILY SSF51161 2 248 1.89E-70 T 23-04-2016 IPR011004 Trimeric LpxA-like CFF04554_RS08425 09546b6f4a7a0997dcdf1b0406006398 514 Gene3D G3DSA:3.40.50.980 174 335 1.0E-35 T 23-04-2016 CFF04554_RS08425 09546b6f4a7a0997dcdf1b0406006398 514 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 23-04-2016 IPR020845 AMP-binding, conserved site CFF04554_RS08425 09546b6f4a7a0997dcdf1b0406006398 514 Gene3D G3DSA:3.30.300.30 410 508 6.7E-29 T 23-04-2016 CFF04554_RS08425 09546b6f4a7a0997dcdf1b0406006398 514 Gene3D G3DSA:3.40.50.980 9 173 1.1E-41 T 23-04-2016 CFF04554_RS08425 09546b6f4a7a0997dcdf1b0406006398 514 PANTHER PTHR24096 9 508 8.1E-155 T 23-04-2016 CFF04554_RS08425 09546b6f4a7a0997dcdf1b0406006398 514 SUPERFAMILY SSF56801 3 511 9.03E-141 T 23-04-2016 CFF04554_RS08425 09546b6f4a7a0997dcdf1b0406006398 514 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 499 1.7E-15 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain CFF04554_RS08425 09546b6f4a7a0997dcdf1b0406006398 514 Pfam PF00501 AMP-binding enzyme 15 415 5.2E-102 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CFF04554_RS08425 09546b6f4a7a0997dcdf1b0406006398 514 Gene3D G3DSA:2.30.38.10 336 406 2.1E-26 T 23-04-2016 CFF04554_RS05330 ea7a16304915369e3e14d2ed0c241e61 248 PANTHER PTHR23090 3 245 6.9E-64 T 23-04-2016 CFF04554_RS05330 ea7a16304915369e3e14d2ed0c241e61 248 SUPERFAMILY SSF52402 3 244 3.67E-62 T 23-04-2016 CFF04554_RS05330 ea7a16304915369e3e14d2ed0c241e61 248 Pfam PF02540 NAD synthase 10 240 4.9E-69 T 23-04-2016 IPR022310 NAD/GMP synthase CFF04554_RS05330 ea7a16304915369e3e14d2ed0c241e61 248 TIGRFAM TIGR00552 nadE: NAD+ synthetase 8 243 7.4E-67 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 CFF04554_RS05330 ea7a16304915369e3e14d2ed0c241e61 248 Gene3D G3DSA:3.40.50.620 9 245 7.3E-70 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS05330 ea7a16304915369e3e14d2ed0c241e61 248 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 2 245 29.977 T 23-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 CFF04554_RS04045 f1c7011b22bf320ba99ea905be0b056b 626 Pfam PF03961 Protein of unknown function (DUF342) 116 563 1.0E-58 T 23-04-2016 IPR005646 Protein of unknown function DUF342 CFF04554_RS06620 109cd9c1a0a22fabf7358454ebba26d5 81 SUPERFAMILY SSF46689 26 75 2.02E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS06620 109cd9c1a0a22fabf7358454ebba26d5 81 SMART SM00342 1 72 1.7E-9 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CFF04554_RS06620 109cd9c1a0a22fabf7358454ebba26d5 81 PANTHER PTHR11019 6 80 4.4E-17 T 23-04-2016 CFF04554_RS06620 109cd9c1a0a22fabf7358454ebba26d5 81 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 56 72 2.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CFF04554_RS06620 109cd9c1a0a22fabf7358454ebba26d5 81 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 41 56 2.0E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CFF04554_RS06620 109cd9c1a0a22fabf7358454ebba26d5 81 Pfam PF12833 Helix-turn-helix domain 3 73 6.9E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CFF04554_RS06620 109cd9c1a0a22fabf7358454ebba26d5 81 Gene3D G3DSA:1.10.10.60 26 76 4.0E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS01175 f0edbbf1b60be767a2b2a1d2511c8f85 329 PIRSF PIRSF002465 1 329 2.1E-123 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CFF04554_RS01175 f0edbbf1b60be767a2b2a1d2511c8f85 329 Gene3D G3DSA:3.40.718.10 1 326 5.7E-126 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CFF04554_RS01175 f0edbbf1b60be767a2b2a1d2511c8f85 329 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 326 7.7E-117 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CFF04554_RS01175 f0edbbf1b60be767a2b2a1d2511c8f85 329 PANTHER PTHR30100 1 329 1.3E-120 T 23-04-2016 CFF04554_RS01175 f0edbbf1b60be767a2b2a1d2511c8f85 329 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 329 136.879 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CFF04554_RS01175 f0edbbf1b60be767a2b2a1d2511c8f85 329 SUPERFAMILY SSF53659 1 327 6.58E-98 T 23-04-2016 CFF04554_RS01175 f0edbbf1b60be767a2b2a1d2511c8f85 329 PANTHER PTHR30100:SF1 1 329 1.3E-120 T 23-04-2016 CFF04554_RS01175 f0edbbf1b60be767a2b2a1d2511c8f85 329 Pfam PF02504 Fatty acid synthesis protein 3 317 3.1E-112 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 CFF04554_RS00855 fadbba807b91b30037089a5f4d748040 194 PANTHER PTHR34229 2 193 4.5E-25 T 23-04-2016 CFF04554_RS00855 fadbba807b91b30037089a5f4d748040 194 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 192 2.3E-43 T 23-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 CFF04554_RS00855 fadbba807b91b30037089a5f4d748040 194 PANTHER PTHR34229:SF1 2 193 4.5E-25 T 23-04-2016 CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 Pfam PF00733 Asparagine synthase 227 578 4.1E-81 T 23-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 PANTHER PTHR11772:SF10 429 576 2.7E-120 T 23-04-2016 CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 PANTHER PTHR11772:SF10 2 371 2.7E-120 T 23-04-2016 CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 PIRSF PIRSF001589 1 582 3.1E-140 T 23-04-2016 CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 PANTHER PTHR11772 429 576 2.7E-120 T 23-04-2016 CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 PANTHER PTHR11772 2 371 2.7E-120 T 23-04-2016 CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 516 2.7E-132 T 23-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 SUPERFAMILY SSF56235 1 209 2.32E-53 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 Gene3D G3DSA:3.60.20.10 1 207 2.7E-58 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 Gene3D G3DSA:3.40.50.620 433 578 2.4E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 Gene3D G3DSA:3.40.50.620 218 393 2.4E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 Pfam PF13537 Glutamine amidotransferase domain 41 153 1.5E-34 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 SUPERFAMILY SSF52402 437 569 7.91E-66 T 23-04-2016 CFF04554_RS08175 9900f8eb60b98233525bce4d94ee58c7 583 SUPERFAMILY SSF52402 218 369 7.91E-66 T 23-04-2016 CFF04554_RS02400 d08ac8ae5c6ef10443746510ff49610d 85 PANTHER PTHR35601 2 84 1.8E-25 T 23-04-2016 CFF04554_RS02400 d08ac8ae5c6ef10443746510ff49610d 85 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 2 84 6.3E-12 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CFF04554_RS02400 d08ac8ae5c6ef10443746510ff49610d 85 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 84 1.4E-12 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CFF04554_RS02400 d08ac8ae5c6ef10443746510ff49610d 85 PANTHER PTHR35601:SF1 2 84 1.8E-25 T 23-04-2016 CFF04554_RS02400 d08ac8ae5c6ef10443746510ff49610d 85 SUPERFAMILY SSF143011 2 83 8.5E-23 T 23-04-2016 CFF04554_RS04435 10cf66e6049117453efbb96f5e2aea7e 213 PANTHER PTHR32479:SF11 116 204 9.5E-13 T 23-04-2016 CFF04554_RS04435 10cf66e6049117453efbb96f5e2aea7e 213 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 43 211 4.3E-25 T 23-04-2016 IPR003741 LUD domain CFF04554_RS04435 10cf66e6049117453efbb96f5e2aea7e 213 PANTHER PTHR32479 116 204 9.5E-13 T 23-04-2016 CFF04554_RS04435 10cf66e6049117453efbb96f5e2aea7e 213 SUPERFAMILY SSF100950 37 210 3.01E-31 T 23-04-2016 CFF04554_RS04435 10cf66e6049117453efbb96f5e2aea7e 213 Gene3D G3DSA:3.40.50.10420 37 211 4.7E-37 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 SUPERFAMILY SSF51735 133 281 1.48E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 PANTHER PTHR16254:SF21 38 303 2.3E-46 T 23-04-2016 CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 Pfam PF02080 TrkA-C domain 294 363 6.1E-9 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 Pfam PF02254 TrkA-N domain 137 259 2.9E-14 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 Gene3D G3DSA:3.40.50.720 129 273 1.4E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 SUPERFAMILY SSF116726 278 363 1.7E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 Gene3D G3DSA:3.30.70.1450 291 363 1.2E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 Gene3D G3DSA:1.10.287.70 33 115 1.1E-14 T 23-04-2016 CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 Pfam PF07885 Ion channel 40 113 1.1E-10 T 23-04-2016 IPR013099 Potassium channel domain CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 SUPERFAMILY SSF81324 28 157 1.83E-18 T 23-04-2016 CFF04554_RS04845 7df8b4af31508be6f5cfca75bc249e7a 376 PANTHER PTHR16254 38 303 2.3E-46 T 23-04-2016 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Gene3D G3DSA:3.40.50.20 532 661 1.2E-51 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PANTHER PTHR11405 894 1083 0.0 T 23-04-2016 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PANTHER PTHR11405 1 877 0.0 T 23-04-2016 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 SUPERFAMILY SSF56059 126 397 1.41E-106 T 23-04-2016 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 SUPERFAMILY SSF52440 556 674 3.88E-45 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 SUPERFAMILY SSF56059 672 946 5.48E-99 T 23-04-2016 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1064 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Gene3D G3DSA:1.10.1030.10 396 531 3.6E-39 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 SMART SM01096 415 542 2.7E-51 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 162 176 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 708 722 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Pfam PF02142 MGS-like domain 970 1054 1.4E-18 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Gene3D G3DSA:3.30.470.20 744 947 9.0E-73 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Gene3D G3DSA:3.30.470.20 199 395 2.0E-73 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 SUPERFAMILY SSF52440 1 125 9.93E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 419 541 2.6E-34 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 SMART SM00851 968 1054 4.7E-29 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 126 332 3.2E-70 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 672 873 1.5E-35 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PANTHER PTHR11405:SF5 894 1083 0.0 T 23-04-2016 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PANTHER PTHR11405:SF5 1 877 0.0 T 23-04-2016 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1075 12.626 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 837 844 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 SUPERFAMILY SSF48108 392 544 1.57E-39 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 SUPERFAMILY SSF52335 950 1082 4.71E-34 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 376 394 1.6E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 1.6E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 202 221 1.6E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 237 254 1.6E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 166 178 1.6E-63 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Gene3D G3DSA:3.40.50.20 4 107 6.8E-42 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Gene3D G3DSA:3.30.1490.20 141 198 4.5E-21 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Gene3D G3DSA:3.40.50.1380 950 1083 3.9E-36 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS01595 931cc1c9b00fbfb26c2dc34b278238e6 1084 Gene3D G3DSA:3.30.1490.20 685 743 3.0E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 914 18.987 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 PANTHER PTHR11946:SF11 273 902 0.0 T 23-04-2016 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 PANTHER PTHR11946:SF11 5 253 0.0 T 23-04-2016 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 Gene3D G3DSA:3.90.740.10 206 389 4.2E-47 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 PANTHER PTHR11946 273 902 0.0 T 23-04-2016 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 PANTHER PTHR11946 5 253 0.0 T 23-04-2016 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 782 1.7E-259 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 Gene3D G3DSA:3.40.50.620 404 641 4.2E-132 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 Gene3D G3DSA:3.40.50.620 13 200 4.2E-132 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 SUPERFAMILY SSF52374 1 202 8.04E-131 T 23-04-2016 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 SUPERFAMILY SSF52374 401 655 8.04E-131 T 23-04-2016 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 SUPERFAMILY SSF50677 207 402 1.47E-42 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 SUPERFAMILY SSF47323 659 915 2.62E-45 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 Pfam PF08264 Anticodon-binding domain of tRNA 687 834 4.2E-16 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 648 1.7E-216 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 568 577 5.6E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.6E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 232 255 5.6E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 5.6E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 5.6E-31 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CFF04554_RS03020 14419bbb9e10125a2223448fa3965c51 916 Gene3D G3DSA:1.10.730.10 649 776 5.2E-28 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 SMART SM00382 57 229 1.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 Gene3D G3DSA:3.30.250.10 269 327 2.2E-27 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 Hamap MF_00268 Protein RecA [recA]. 5 330 51.559 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 PANTHER PTHR22942:SF1 3 340 2.6E-190 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 PANTHER PTHR22942 3 340 2.6E-190 T 23-04-2016 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 SUPERFAMILY SSF52540 3 268 7.93E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 Gene3D G3DSA:3.40.50.300 30 268 1.1E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 PRINTS PR00142 RecA protein signature 211 239 4.4E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 PRINTS PR00142 RecA protein signature 93 122 4.4E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 PRINTS PR00142 RecA protein signature 298 315 4.4E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 PRINTS PR00142 RecA protein signature 244 273 4.4E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 PRINTS PR00142 RecA protein signature 165 194 4.4E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 PRINTS PR00142 RecA protein signature 127 156 4.4E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 ProSitePatterns PS00321 recA signature. 214 222 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 SUPERFAMILY SSF54752 269 327 3.27E-21 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.9E-170 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS01005 6bb08130a1ef070b687b9a4d2c6df57e 345 Pfam PF00154 recA bacterial DNA recombination protein 7 269 2.2E-139 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CFF04554_RS07675 8ea4cfefbcadd54f80e889a13fffc9c3 435 PANTHER PTHR11564:SF3 122 423 1.3E-59 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CFF04554_RS07675 8ea4cfefbcadd54f80e889a13fffc9c3 435 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 5 318 2.0E-62 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CFF04554_RS07675 8ea4cfefbcadd54f80e889a13fffc9c3 435 Gene3D G3DSA:3.40.50.300 224 423 4.6E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07675 8ea4cfefbcadd54f80e889a13fffc9c3 435 SUPERFAMILY SSF52540 224 422 2.53E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07675 8ea4cfefbcadd54f80e889a13fffc9c3 435 Pfam PF00448 SRP54-type protein, GTPase domain 230 422 4.8E-39 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS07675 8ea4cfefbcadd54f80e889a13fffc9c3 435 SMART SM00962 229 423 1.6E-54 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS07675 8ea4cfefbcadd54f80e889a13fffc9c3 435 SMART SM00382 228 386 1.1E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS07675 8ea4cfefbcadd54f80e889a13fffc9c3 435 PANTHER PTHR11564 122 423 1.3E-59 T 23-04-2016 CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 Gene3D G3DSA:1.10.1060.10 111 236 6.5E-27 T 23-04-2016 CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 7 111 1.3E-29 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 Pfam PF13183 4Fe-4S dicluster domain 147 221 6.1E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 SUPERFAMILY SSF46548 109 236 2.09E-24 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 57 65 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 PANTHER PTHR11921:SF13 3 236 2.3E-73 T 23-04-2016 CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 SUPERFAMILY SSF54292 2 106 4.19E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 151 162 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 PANTHER PTHR11921 3 236 2.3E-73 T 23-04-2016 CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 Gene3D G3DSA:3.10.20.30 3 106 2.0E-31 T 23-04-2016 IPR012675 Beta-grasp domain CFF04554_RS02075 89b4070eafda034cc2459aeebda24ae7 239 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 12 230 1.3E-50 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CFF04554_RS00270 e156acb0e293928854fb639bec381f94 72 Gene3D G3DSA:2.40.50.140 2 72 1.4E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS00270 e156acb0e293928854fb639bec381f94 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.759 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CFF04554_RS00270 e156acb0e293928854fb639bec381f94 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.5E-34 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CFF04554_RS00270 e156acb0e293928854fb639bec381f94 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 3.1E-27 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CFF04554_RS00270 e156acb0e293928854fb639bec381f94 72 SUPERFAMILY SSF50249 1 71 4.65E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS00270 e156acb0e293928854fb639bec381f94 72 PANTHER PTHR33370 2 72 1.3E-41 T 23-04-2016 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 SUPERFAMILY SSF64153 11 204 2.22E-45 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 PANTHER PTHR12592:SF0 10 458 1.3E-57 T 23-04-2016 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 Pfam PF01256 Carbohydrate kinase 239 456 9.9E-37 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 11 199 3.6E-35 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 Gene3D G3DSA:3.40.1190.20 225 458 3.6E-45 T 23-04-2016 IPR029056 Ribokinase-like CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 210 459 4.1E-43 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 4 199 18.841 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 PIRSF PIRSF017184 7 461 9.1E-90 T 23-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 Pfam PF03853 YjeF-related protein N-terminus 25 178 1.8E-34 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 Gene3D G3DSA:3.40.50.10260 10 201 2.2E-49 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 PANTHER PTHR12592 10 458 1.3E-57 T 23-04-2016 CFF04554_RS08520 077f221eaa77ed4f31898f9b0de76a58 461 SUPERFAMILY SSF53613 225 459 6.37E-42 T 23-04-2016 IPR029056 Ribokinase-like CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 SUPERFAMILY SSF52540 121 336 1.18E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 SUPERFAMILY SSF52540 399 495 1.18E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 SMART SM00487 106 290 7.1E-18 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 Pfam PF00271 Helicase conserved C-terminal domain 395 485 1.3E-8 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 Gene3D G3DSA:3.40.50.300 108 275 2.6E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 Gene3D G3DSA:3.40.50.300 389 520 2.3E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 Gene3D G3DSA:3.40.50.300 302 324 2.3E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 PANTHER PTHR30580 101 610 1.7E-139 T 23-04-2016 CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 TIGRFAM TIGR00595 priA: primosomal protein N' 128 592 2.6E-148 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 SMART SM00490 388 485 3.2E-10 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 Pfam PF00270 DEAD/DEAH box helicase 113 267 4.1E-9 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CFF04554_RS04330 1dcd3757793045d2d96f314340b538a8 610 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 609 19.184 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CFF04554_RS08180 c6faf092c9c10047a0d0099f65058881 356 PANTHER PTHR39662 1 325 9.0E-51 T 23-04-2016 CFF04554_RS08180 c6faf092c9c10047a0d0099f65058881 356 PIRSF PIRSF005357 1 353 3.5E-76 T 23-04-2016 IPR007152 Protein of unknown function DUF354 CFF04554_RS08180 c6faf092c9c10047a0d0099f65058881 356 SUPERFAMILY SSF53756 13 325 8.27E-11 T 23-04-2016 CFF04554_RS08180 c6faf092c9c10047a0d0099f65058881 356 Pfam PF04007 Protein of unknown function (DUF354) 2 339 7.6E-48 T 23-04-2016 IPR007152 Protein of unknown function DUF354 CFF04554_RS08180 c6faf092c9c10047a0d0099f65058881 356 PANTHER PTHR39662:SF1 1 325 9.0E-51 T 23-04-2016 CFF04554_RS05590 ea5ba946de6259bb37ed9998a81bf0a9 183 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 146 182 1.5E-9 T 23-04-2016 IPR013491 Caudovirus, tape measure, N-terminal CFF04554_RS01705 46733d88c0e3dca40111bbd3babacf21 199 PANTHER PTHR33279 1 197 5.6E-24 T 23-04-2016 CFF04554_RS01705 46733d88c0e3dca40111bbd3babacf21 199 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 3 197 2.8E-45 T 23-04-2016 IPR019870 Selenium metabolism protein YedF CFF04554_RS01705 46733d88c0e3dca40111bbd3babacf21 199 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 3 27 - T 23-04-2016 IPR001455 TusA-like domain CFF04554_RS01705 46733d88c0e3dca40111bbd3babacf21 199 SUPERFAMILY SSF64307 1 65 4.32E-16 T 23-04-2016 IPR001455 TusA-like domain CFF04554_RS01705 46733d88c0e3dca40111bbd3babacf21 199 PANTHER PTHR33279:SF3 1 197 5.6E-24 T 23-04-2016 CFF04554_RS01705 46733d88c0e3dca40111bbd3babacf21 199 Gene3D G3DSA:3.40.1260.10 119 192 5.0E-6 T 23-04-2016 IPR027396 DsrEFH-like CFF04554_RS01705 46733d88c0e3dca40111bbd3babacf21 199 SUPERFAMILY SSF75169 112 194 8.07E-6 T 23-04-2016 IPR027396 DsrEFH-like CFF04554_RS01705 46733d88c0e3dca40111bbd3babacf21 199 Pfam PF01206 Sulfurtransferase TusA 2 66 4.0E-18 T 23-04-2016 IPR001455 TusA-like domain CFF04554_RS01705 46733d88c0e3dca40111bbd3babacf21 199 Gene3D G3DSA:3.30.110.40 2 66 2.9E-17 T 23-04-2016 IPR001455 TusA-like domain CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 PANTHER PTHR24423 170 371 1.0E-31 T 23-04-2016 CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 PANTHER PTHR24423 45 55 1.0E-31 T 23-04-2016 CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 SUPERFAMILY SSF47384 168 224 1.47E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 SMART SM00388 172 231 2.8E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 Gene3D G3DSA:1.10.287.130 170 223 7.0E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 273 372 5.6E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 SUPERFAMILY SSF55874 233 370 3.12E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 SMART SM00387 272 374 5.4E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 Gene3D G3DSA:3.30.565.10 233 371 9.1E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS04220 3811da6c5a6c06e002a604c5997d51a5 374 Pfam PF00512 His Kinase A (phospho-acceptor) domain 173 226 1.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS07980 7720dd011b8d0cde16306cf9f6e0628f 453 Pfam PF04055 Radical SAM superfamily 53 225 8.6E-22 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS07980 7720dd011b8d0cde16306cf9f6e0628f 453 PANTHER PTHR13932:SF6 3 446 6.8E-191 T 23-04-2016 CFF04554_RS07980 7720dd011b8d0cde16306cf9f6e0628f 453 SUPERFAMILY SSF102114 10 439 2.49E-131 T 23-04-2016 CFF04554_RS07980 7720dd011b8d0cde16306cf9f6e0628f 453 SMART SM00729 47 269 4.3E-55 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS07980 7720dd011b8d0cde16306cf9f6e0628f 453 PANTHER PTHR13932 3 446 6.8E-191 T 23-04-2016 CFF04554_RS07980 7720dd011b8d0cde16306cf9f6e0628f 453 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 2 453 6.4E-190 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 CFF04554_RS07980 7720dd011b8d0cde16306cf9f6e0628f 453 Pfam PF06969 HemN C-terminal domain 360 424 7.6E-8 T 23-04-2016 IPR010723 HemN, C-terminal CFF04554_RS07980 7720dd011b8d0cde16306cf9f6e0628f 453 PIRSF PIRSF000167 1 449 5.3E-162 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 CFF04554_RS07980 7720dd011b8d0cde16306cf9f6e0628f 453 Gene3D G3DSA:3.80.30.20 48 280 8.6E-33 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 PRINTS PR00906 SecA protein signature 118 128 8.3E-64 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 PRINTS PR00906 SecA protein signature 373 390 8.3E-64 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 PRINTS PR00906 SecA protein signature 102 116 8.3E-64 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 PRINTS PR00906 SecA protein signature 172 192 8.3E-64 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 PRINTS PR00906 SecA protein signature 336 358 8.3E-64 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 PRINTS PR00906 SecA protein signature 410 423 8.3E-64 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 PRINTS PR00906 SecA protein signature 64 88 8.3E-64 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 798 19.422 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Pfam PF00271 Helicase conserved C-terminal domain 430 547 2.6E-5 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Pfam PF07516 SecA Wing and Scaffold domain 586 793 1.3E-54 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Pfam PF02810 SEC-C motif 828 846 1.1E-9 T 23-04-2016 IPR004027 SEC-C motif CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 SMART SM00957 6 399 1.4E-269 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 SUPERFAMILY SSF81767 235 365 6.93E-43 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 SUPERFAMILY SSF81886 588 836 2.09E-64 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 513 1.4E-225 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Gene3D G3DSA:1.10.3060.10 616 793 4.5E-43 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Pfam PF01043 SecA preprotein cross-linking domain 238 355 1.7E-37 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 SUPERFAMILY SSF52540 6 230 2.45E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 SUPERFAMILY SSF52540 365 412 2.45E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Gene3D G3DSA:3.40.50.300 366 413 4.2E-116 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Gene3D G3DSA:3.40.50.300 3 230 4.2E-116 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Gene3D G3DSA:3.40.50.300 414 587 2.4E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 SMART SM00958 230 355 7.2E-66 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 SUPERFAMILY SSF52540 414 586 7.16E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Gene3D G3DSA:3.90.1440.10 253 365 5.4E-45 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 PANTHER PTHR30612 1 849 0.0 T 23-04-2016 CFF04554_RS02860 51a1c455b5a1d547e0ae9df9c4a2cdda 855 Pfam PF07517 SecA DEAD-like domain 7 399 3.4E-123 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CFF04554_RS01395 18c958c877f3868ec772052c6a40bd29 241 PANTHER PTHR24220:SF582 3 237 7.7E-75 T 23-04-2016 CFF04554_RS01395 18c958c877f3868ec772052c6a40bd29 241 Pfam PF00005 ABC transporter 25 164 5.9E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS01395 18c958c877f3868ec772052c6a40bd29 241 SMART SM00382 25 212 2.0E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS01395 18c958c877f3868ec772052c6a40bd29 241 SUPERFAMILY SSF52540 2 215 1.27E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01395 18c958c877f3868ec772052c6a40bd29 241 Gene3D G3DSA:3.40.50.300 2 224 1.0E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01395 18c958c877f3868ec772052c6a40bd29 241 PANTHER PTHR24220 3 237 7.7E-75 T 23-04-2016 CFF04554_RS01395 18c958c877f3868ec772052c6a40bd29 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS06440 98750783737cd6be5029b4f15816ccf5 279 Pfam PF02401 LytB protein 3 272 1.6E-88 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CFF04554_RS06440 98750783737cd6be5029b4f15816ccf5 279 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 275 31.611 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CFF04554_RS06440 98750783737cd6be5029b4f15816ccf5 279 PANTHER PTHR30426 1 274 3.9E-103 T 23-04-2016 CFF04554_RS06440 98750783737cd6be5029b4f15816ccf5 279 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 273 1.7E-96 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CFF04554_RS07430 bf52385b00bb6baf7cb3548b95dd733d 343 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 136 152 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CFF04554_RS07430 bf52385b00bb6baf7cb3548b95dd733d 343 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 3 335 1.6E-124 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CFF04554_RS07430 bf52385b00bb6baf7cb3548b95dd733d 343 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 336 4.2E-115 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CFF04554_RS07430 bf52385b00bb6baf7cb3548b95dd733d 343 SUPERFAMILY SSF51726 3 341 1.33E-105 T 23-04-2016 CFF04554_RS07430 bf52385b00bb6baf7cb3548b95dd733d 343 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 5 338 45.784 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CFF04554_RS07430 bf52385b00bb6baf7cb3548b95dd733d 343 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 16 25 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CFF04554_RS07430 bf52385b00bb6baf7cb3548b95dd733d 343 PANTHER PTHR21091 1 340 2.5E-124 T 23-04-2016 CFF04554_RS07430 bf52385b00bb6baf7cb3548b95dd733d 343 Gene3D G3DSA:3.20.20.210 3 339 3.5E-127 T 23-04-2016 CFF04554_RS07430 bf52385b00bb6baf7cb3548b95dd733d 343 PANTHER PTHR21091:SF2 1 340 2.5E-124 T 23-04-2016 CFF04554_RS02920 187c3df991fb4e2835d3bd83f8448844 253 Gene3D G3DSA:3.40.50.1860 1 165 5.0E-44 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS02920 187c3df991fb4e2835d3bd83f8448844 253 Hamap MF_00258 Glutamate racemase [murI]. 1 247 28.743 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS02920 187c3df991fb4e2835d3bd83f8448844 253 PANTHER PTHR21198:SF3 2 253 4.6E-59 T 23-04-2016 CFF04554_RS02920 187c3df991fb4e2835d3bd83f8448844 253 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 213 3.3E-60 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS02920 187c3df991fb4e2835d3bd83f8448844 253 PANTHER PTHR21198 2 253 4.6E-59 T 23-04-2016 CFF04554_RS02920 187c3df991fb4e2835d3bd83f8448844 253 SUPERFAMILY SSF53681 1 99 6.54E-32 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS02920 187c3df991fb4e2835d3bd83f8448844 253 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 67 75 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS02920 187c3df991fb4e2835d3bd83f8448844 253 SUPERFAMILY SSF53681 104 248 1.57E-20 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS02920 187c3df991fb4e2835d3bd83f8448844 253 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 208 3.6E-19 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS08915 909fbdfef25664866036a0e1608c3176 131 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 106 124 - T 23-04-2016 IPR019897 RidA, conserved site CFF04554_RS08915 909fbdfef25664866036a0e1608c3176 131 Pfam PF01042 Endoribonuclease L-PSP 17 129 1.3E-40 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CFF04554_RS08915 909fbdfef25664866036a0e1608c3176 131 Gene3D G3DSA:3.30.1330.40 16 130 2.7E-46 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CFF04554_RS08915 909fbdfef25664866036a0e1608c3176 131 PANTHER PTHR11803 17 128 8.5E-50 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family CFF04554_RS08915 909fbdfef25664866036a0e1608c3176 131 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 16 129 2.0E-46 T 23-04-2016 IPR006056 RidA family CFF04554_RS08915 909fbdfef25664866036a0e1608c3176 131 SUPERFAMILY SSF55298 16 130 5.03E-43 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CFF04554_RS03215 78e84859cd0cd4460588a2e166b5894f 211 Pfam PF02661 Fic/DOC family 47 131 3.5E-12 T 23-04-2016 IPR003812 Fido domain CFF04554_RS03215 78e84859cd0cd4460588a2e166b5894f 211 PANTHER PTHR39560:SF1 1 203 2.8E-28 T 23-04-2016 CFF04554_RS03215 78e84859cd0cd4460588a2e166b5894f 211 Gene3D G3DSA:1.10.3290.10 3 196 3.7E-54 T 23-04-2016 IPR003812 Fido domain CFF04554_RS03215 78e84859cd0cd4460588a2e166b5894f 211 PANTHER PTHR39560 1 203 2.8E-28 T 23-04-2016 CFF04554_RS03215 78e84859cd0cd4460588a2e166b5894f 211 SUPERFAMILY SSF140931 19 193 8.37E-36 T 23-04-2016 IPR003812 Fido domain CFF04554_RS08580 184120987a9c30e999b636c58b04b897 125 Pfam PF05154 TM2 domain 43 91 1.1E-7 T 23-04-2016 IPR007829 TM2 domain CFF04554_RS03540 95607f463eb194196bb696aab5836955 164 Pfam PF00460 Flagella basal body rod protein 10 34 2.0E-9 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CFF04554_RS03540 95607f463eb194196bb696aab5836955 164 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 113 161 2.9E-10 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS03540 95607f463eb194196bb696aab5836955 164 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CFF04554_RS03540 95607f463eb194196bb696aab5836955 164 PANTHER PTHR30435 90 163 3.5E-52 T 23-04-2016 CFF04554_RS03540 95607f463eb194196bb696aab5836955 164 PANTHER PTHR30435 1 62 3.5E-52 T 23-04-2016 CFF04554_RS03540 95607f463eb194196bb696aab5836955 164 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 163 3.8E-57 T 23-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CFF04554_RS03540 95607f463eb194196bb696aab5836955 164 PANTHER PTHR30435:SF2 90 163 3.5E-52 T 23-04-2016 CFF04554_RS03540 95607f463eb194196bb696aab5836955 164 PANTHER PTHR30435:SF2 1 62 3.5E-52 T 23-04-2016 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 114 4.1E-23 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 SUPERFAMILY SSF55347 116 224 1.68E-33 T 23-04-2016 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 Gene3D G3DSA:3.40.50.720 2 121 1.1E-8 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 PANTHER PTHR20836 1 254 1.1E-62 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 253 3.5E-72 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 138 155 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 PIRSF PIRSF000161 1 254 2.0E-75 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 253 30.691 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 117 252 5.1E-39 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 Gene3D G3DSA:3.30.360.10 122 222 2.9E-35 T 23-04-2016 CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 SUPERFAMILY SSF51735 224 254 7.6E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01485 ba71880e4f8a3faec543bd840073eaf4 254 SUPERFAMILY SSF51735 1 115 7.6E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 2.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 2.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 299 317 2.4E-6 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 SUPERFAMILY SSF47384 123 188 8.04E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 SMART SM00388 128 192 9.2E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 SUPERFAMILY SSF55874 197 333 8.91E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 SMART SM00387 232 333 1.4E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 Gene3D G3DSA:1.10.287.130 129 188 8.9E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 Pfam PF00512 His Kinase A (phospho-acceptor) domain 128 188 9.0E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 PANTHER PTHR24423 1 26 2.1E-28 T 23-04-2016 CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 PANTHER PTHR24423 42 333 2.1E-28 T 23-04-2016 CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 Gene3D G3DSA:3.30.565.10 194 333 7.2E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS06380 0926d6d07ff9f0897d6ac7840c38d575 333 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 233 331 3.9E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 SUPERFAMILY SSF103647 201 232 6.93E-7 T 23-04-2016 IPR028974 TSP type-3 repeat GO:0005509 CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 Gene3D G3DSA:3.30.1330.60 222 342 1.8E-40 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 Pfam PF13505 Outer membrane protein beta-barrel domain 31 166 5.9E-8 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 PANTHER PTHR30128 203 339 5.8E-46 T 23-04-2016 CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 SUPERFAMILY SSF103088 222 341 3.14E-37 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 SUPERFAMILY SSF56925 28 176 3.14E-17 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 PRINTS PR01021 OMPA domain signature 242 264 1.0E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 PRINTS PR01021 OMPA domain signature 287 303 1.0E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 PRINTS PR01021 OMPA domain signature 272 287 1.0E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 Pfam PF00691 OmpA family 241 336 1.6E-26 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS01950 a57ed9b62423dc599f013cac0ab26697 345 Gene3D G3DSA:2.40.160.20 24 170 2.8E-17 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CFF04554_RS00350 c5de248eb4e2c7699d16c09da386a4fc 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CFF04554_RS00350 c5de248eb4e2c7699d16c09da386a4fc 482 Gene3D G3DSA:3.40.605.10 3 260 5.4E-92 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CFF04554_RS00350 c5de248eb4e2c7699d16c09da386a4fc 482 Pfam PF00171 Aldehyde dehydrogenase family 14 471 1.2E-163 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CFF04554_RS00350 c5de248eb4e2c7699d16c09da386a4fc 482 SUPERFAMILY SSF53720 2 477 6.15E-155 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CFF04554_RS00350 c5de248eb4e2c7699d16c09da386a4fc 482 PANTHER PTHR11699:SF46 2 482 8.7E-199 T 23-04-2016 CFF04554_RS00350 c5de248eb4e2c7699d16c09da386a4fc 482 PANTHER PTHR11699 2 482 8.7E-199 T 23-04-2016 CFF04554_RS00350 c5de248eb4e2c7699d16c09da386a4fc 482 Gene3D G3DSA:3.40.309.10 261 439 3.4E-63 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CFF04554_RS08970 720052a962cf9657b245b17e6cefa859 226 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 26 219 4.6E-50 T 23-04-2016 CFF04554_RS08970 720052a962cf9657b245b17e6cefa859 226 PANTHER PTHR23291 22 226 1.8E-61 T 23-04-2016 IPR006214 Bax inhibitor 1-related CFF04554_RS08970 720052a962cf9657b245b17e6cefa859 226 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 93 123 - T 23-04-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 CFF04554_RS06225 7919a475f35ec7471b8e8d2d0a097922 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 287 6.3E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CFF04554_RS06225 7919a475f35ec7471b8e8d2d0a097922 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 303 6.3E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CFF04554_RS06225 7919a475f35ec7471b8e8d2d0a097922 307 Gene3D G3DSA:1.10.10.60 257 304 3.5E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS06225 7919a475f35ec7471b8e8d2d0a097922 307 PANTHER PTHR11019 158 304 2.8E-27 T 23-04-2016 CFF04554_RS06225 7919a475f35ec7471b8e8d2d0a097922 307 Pfam PF12833 Helix-turn-helix domain 226 304 1.8E-12 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CFF04554_RS06225 7919a475f35ec7471b8e8d2d0a097922 307 SUPERFAMILY SSF46689 257 305 6.27E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS06225 7919a475f35ec7471b8e8d2d0a097922 307 SMART SM00342 220 303 5.2E-16 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CFF04554_RS06225 7919a475f35ec7471b8e8d2d0a097922 307 PANTHER PTHR11019:SF61 158 304 2.8E-27 T 23-04-2016 CFF04554_RS07425 c9a4b253a11c8aaf5c1ebad7c4302420 308 Pfam PF04055 Radical SAM superfamily 33 192 1.3E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS07425 c9a4b253a11c8aaf5c1ebad7c4302420 308 PANTHER PTHR11228 11 217 2.4E-33 T 23-04-2016 CFF04554_RS07425 c9a4b253a11c8aaf5c1ebad7c4302420 308 SUPERFAMILY SSF102114 35 230 1.57E-19 T 23-04-2016 CFF04554_RS07425 c9a4b253a11c8aaf5c1ebad7c4302420 308 PANTHER PTHR11228:SF25 11 217 2.4E-33 T 23-04-2016 CFF04554_RS07425 c9a4b253a11c8aaf5c1ebad7c4302420 308 Gene3D G3DSA:3.20.20.70 35 221 1.2E-19 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS00045 63adc08ff19b00a40c27b298546b31ff 257 Pfam PF13860 FlgD Ig-like domain 119 196 1.5E-20 T 23-04-2016 IPR025965 FlgD Ig-like domain CFF04554_RS00045 63adc08ff19b00a40c27b298546b31ff 257 PANTHER PTHR30435 25 253 8.2E-32 T 23-04-2016 CFF04554_RS00045 63adc08ff19b00a40c27b298546b31ff 257 PANTHER PTHR30435:SF15 25 253 8.2E-32 T 23-04-2016 CFF04554_RS00045 63adc08ff19b00a40c27b298546b31ff 257 Pfam PF03963 Flagellar hook capping protein - N-terminal region 26 93 9.0E-16 T 23-04-2016 IPR005648 Flagellar hook capping protein CFF04554_RS00045 63adc08ff19b00a40c27b298546b31ff 257 Gene3D G3DSA:3.30.870.20 54 156 5.0E-4 T 23-04-2016 IPR027415 Tyrosyl-DNA phosphodiesterase C-terminal domain CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 SMART SM01058 349 446 7.7E-37 T 23-04-2016 IPR003711 CarD-like/TRCF domain CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 SMART SM00982 870 965 7.8E-28 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 SUPERFAMILY SSF52540 16 241 7.26E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 Pfam PF00271 Helicase conserved C-terminal domain 672 776 5.2E-16 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 Pfam PF02559 CarD-like/TRCF domain 350 444 4.7E-19 T 23-04-2016 IPR003711 CarD-like/TRCF domain CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 SUPERFAMILY SSF52540 521 790 4.53E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 294 943 9.9E-249 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 SMART SM00490 693 777 1.4E-17 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 SMART SM00487 469 657 3.9E-27 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 Pfam PF03461 TRCF domain 871 959 4.6E-17 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 PANTHER PTHR14025 257 960 1.2E-225 T 23-04-2016 CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 PANTHER PTHR14025:SF21 257 960 1.2E-225 T 23-04-2016 CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 Pfam PF00270 DEAD/DEAH box helicase 474 632 9.7E-17 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 SUPERFAMILY SSF143517 860 975 1.03E-24 T 23-04-2016 CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 Gene3D G3DSA:3.40.50.300 462 651 8.5E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 Gene3D G3DSA:3.30.2060.10 107 176 5.6E-6 T 23-04-2016 CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 Gene3D G3DSA:3.40.50.300 653 830 5.5E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 SUPERFAMILY SSF141259 348 418 4.84E-20 T 23-04-2016 IPR003711 CarD-like/TRCF domain CFF04554_RS03700 4bd50b841ff36cc2357fa8ddec17c073 985 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 12 961 23.563 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CFF04554_RS04500 974182321ce564ae58604944c62501fd 602 PANTHER PTHR35399 27 602 2.3E-178 T 23-04-2016 CFF04554_RS04500 974182321ce564ae58604944c62501fd 602 Gene3D G3DSA:2.120.10.30 487 567 1.2E-8 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like CFF04554_RS04500 974182321ce564ae58604944c62501fd 602 Pfam PF05787 Bacterial protein of unknown function (DUF839) 33 569 1.4E-166 T 23-04-2016 IPR008557 Protein of unknown function DUF839 CFF04554_RS04500 974182321ce564ae58604944c62501fd 602 PANTHER PTHR35399:SF2 27 602 2.3E-178 T 23-04-2016 CFF04554_RS04500 974182321ce564ae58604944c62501fd 602 SUPERFAMILY SSF63829 404 569 5.23E-15 T 23-04-2016 CFF04554_RS04500 974182321ce564ae58604944c62501fd 602 SUPERFAMILY SSF63829 254 328 5.23E-15 T 23-04-2016 CFF04554_RS03525 6a63b63763bbccf098a8dc25b6733636 314 Hamap MF_00323 Ferrochelatase [hemH]. 1 314 29.214 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CFF04554_RS03525 6a63b63763bbccf098a8dc25b6733636 314 ProSitePatterns PS00534 Ferrochelatase signature. 183 201 - T 23-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CFF04554_RS03525 6a63b63763bbccf098a8dc25b6733636 314 TIGRFAM TIGR00109 hemH: ferrochelatase 2 312 1.7E-77 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CFF04554_RS03525 6a63b63763bbccf098a8dc25b6733636 314 Gene3D G3DSA:3.40.50.1400 2 193 2.1E-44 T 23-04-2016 CFF04554_RS03525 6a63b63763bbccf098a8dc25b6733636 314 PANTHER PTHR11108:SF1 5 312 8.4E-60 T 23-04-2016 CFF04554_RS03525 6a63b63763bbccf098a8dc25b6733636 314 SUPERFAMILY SSF53800 2 313 2.4E-69 T 23-04-2016 CFF04554_RS03525 6a63b63763bbccf098a8dc25b6733636 314 Pfam PF00762 Ferrochelatase 3 312 8.2E-82 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CFF04554_RS03525 6a63b63763bbccf098a8dc25b6733636 314 Gene3D G3DSA:3.40.50.1400 194 312 7.5E-26 T 23-04-2016 CFF04554_RS03525 6a63b63763bbccf098a8dc25b6733636 314 PANTHER PTHR11108 5 312 8.4E-60 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 Pfam PF02780 Transketolase, C-terminal domain 520 625 1.8E-9 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 Gene3D G3DSA:3.40.50.970 326 506 1.9E-61 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 SUPERFAMILY SSF52518 332 504 7.53E-56 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 PANTHER PTHR11624 1 633 1.2E-275 T 23-04-2016 IPR033247 Transketolase family CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 SMART SM00861 336 503 2.0E-55 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 SUPERFAMILY SSF52518 3 311 3.09E-98 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 SUPERFAMILY SSF52922 509 633 8.9E-40 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 TIGRFAM TIGR00232 tktlase_bact: transketolase 3 633 1.3E-234 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 PANTHER PTHR11624:SF1 1 633 1.2E-275 T 23-04-2016 CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 314 2.0E-112 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 ProSitePatterns PS00802 Transketolase signature 2. 445 461 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 Gene3D G3DSA:3.40.50.970 3 313 9.8E-111 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 Pfam PF02779 Transketolase, pyrimidine binding domain 335 501 2.6E-37 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 Gene3D G3DSA:3.40.50.920 514 631 3.9E-40 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS00345 724b98c6413faaa003c5eba87038d9cc 633 ProSitePatterns PS00801 Transketolase signature 1. 10 30 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CFF04554_RS02750 63eb569ef5876b0bad2c818fc0a22753 317 Pfam PF14804 Jag N-terminus 5 54 2.3E-13 T 23-04-2016 IPR032782 Jag, N-terminal CFF04554_RS02750 63eb569ef5876b0bad2c818fc0a22753 317 SMART SM01245 4 56 4.7E-15 T 23-04-2016 IPR032782 Jag, N-terminal CFF04554_RS02750 63eb569ef5876b0bad2c818fc0a22753 317 Gene3D G3DSA:3.30.30.80 2 54 7.0E-14 T 23-04-2016 IPR032782 Jag, N-terminal CFF04554_RS02750 63eb569ef5876b0bad2c818fc0a22753 317 Gene3D G3DSA:3.30.300.120 169 244 1.7E-14 T 23-04-2016 CFF04554_RS08875 119abaf80925814988872d0cb682548e 169 SUPERFAMILY SSF52218 1 114 1.73E-19 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS08875 119abaf80925814988872d0cb682548e 169 Gene3D G3DSA:3.40.50.360 1 154 1.9E-19 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS08875 119abaf80925814988872d0cb682548e 169 Pfam PF12641 Flavodoxin domain 4 157 2.6E-49 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 Hamap MF_00974 DNA primase [dnaG]. 1 537 25.054 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 Pfam PF08275 DNA primase catalytic core, N-terminal domain 116 238 2.0E-33 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 Gene3D G3DSA:3.90.980.10 108 226 1.9E-30 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 SUPERFAMILY SSF56731 109 403 5.36E-81 T 23-04-2016 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 SMART SM00400 33 87 6.6E-32 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 PIRSF PIRSF002811 1 546 2.2E-132 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 Pfam PF13662 Toprim domain 246 317 1.1E-17 T 23-04-2016 IPR006171 Toprim domain CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 Gene3D G3DSA:3.40.1360.10 227 346 9.6E-38 T 23-04-2016 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 Gene3D G3DSA:3.90.580.10 1 98 7.3E-37 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 Pfam PF16730 DnaG-primase C-terminal, helicase-binding domain 433 543 2.1E-7 T 23-04-2016 IPR031988 DNA primase DnaG, C-terminal helicase-binding domain CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 TIGRFAM TIGR01391 dnaG: DNA primase 1 397 3.0E-129 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 SUPERFAMILY SSF57783 2 97 9.52E-35 T 23-04-2016 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 PANTHER PTHR30313 1 394 7.7E-108 T 23-04-2016 CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 SMART SM00493 245 316 2.5E-16 T 23-04-2016 IPR006171 Toprim domain CFF04554_RS08785 12a4c28063377aa649d92da847593102 546 Pfam PF01807 CHC2 zinc finger 4 97 3.8E-36 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CFF04554_RS06660 dafbdb25c33817e79ef444c3e1d0f369 77 SMART SM00899 1 73 7.5E-10 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CFF04554_RS06660 dafbdb25c33817e79ef444c3e1d0f369 77 SUPERFAMILY SSF50037 3 72 4.58E-10 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal CFF04554_RS06660 dafbdb25c33817e79ef444c3e1d0f369 77 Pfam PF04023 FeoA domain 1 72 1.8E-8 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CFF04554_RS06995 b90a1da60146360af7dc3993d09d68da 336 PANTHER PTHR11807:SF2 11 265 5.1E-38 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CFF04554_RS06995 b90a1da60146360af7dc3993d09d68da 336 PANTHER PTHR11807 11 265 5.1E-38 T 23-04-2016 CFF04554_RS06995 b90a1da60146360af7dc3993d09d68da 336 Pfam PF01171 PP-loop family 14 197 2.0E-47 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CFF04554_RS06995 b90a1da60146360af7dc3993d09d68da 336 Gene3D G3DSA:3.40.50.620 10 179 1.5E-12 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06995 b90a1da60146360af7dc3993d09d68da 336 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 14 199 5.4E-46 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CFF04554_RS06995 b90a1da60146360af7dc3993d09d68da 336 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 267 17.405 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CFF04554_RS06995 b90a1da60146360af7dc3993d09d68da 336 SUPERFAMILY SSF52402 10 221 9.08E-41 T 23-04-2016 CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 SUPERFAMILY SSF53383 1 422 2.93E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 Gene3D G3DSA:3.90.1150.10 288 423 2.6E-46 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 Gene3D G3DSA:3.40.640.10 2 287 3.7E-95 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 PIRSF PIRSF001434 1 423 4.5E-120 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 PANTHER PTHR11808 266 423 1.1E-164 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 PANTHER PTHR11808 4 232 1.1E-164 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 422 7.7E-162 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 PANTHER PTHR11808:SF12 266 423 1.1E-164 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 PANTHER PTHR11808:SF12 4 232 1.1E-164 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CFF04554_RS04595 4914d36ec0a5454ee2358a274cabc64a 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 422 4.7E-127 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 Pfam PF01739 CheR methyltransferase, SAM binding domain 73 248 2.9E-43 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 Gene3D G3DSA:1.10.155.10 2 71 1.3E-4 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 SUPERFAMILY SSF47757 3 72 1.57E-6 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 SUPERFAMILY SSF53335 73 253 4.73E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 SMART SM00138 8 262 1.6E-46 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 PANTHER PTHR24422 1 241 2.2E-34 T 23-04-2016 CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 Gene3D G3DSA:3.40.50.150 72 247 1.9E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 PRINTS PR00996 Glutamate methyltransferase family signature 221 244 2.6E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 PRINTS PR00996 Glutamate methyltransferase family signature 134 150 2.6E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 PRINTS PR00996 Glutamate methyltransferase family signature 202 216 2.6E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 PRINTS PR00996 Glutamate methyltransferase family signature 29 42 2.6E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 2.6E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CFF04554_RS04035 8adadf68b857048c09fc3087d9dd8b62 264 PRINTS PR00996 Glutamate methyltransferase family signature 101 121 2.6E-28 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 729 736 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 Pfam PF00171 Aldehyde dehydrogenase family 514 955 3.9E-107 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 PIRSF PIRSF000197 1 1164 0.0 T 23-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 757 768 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 PANTHER PTHR11699:SF18 524 955 5.1E-95 T 23-04-2016 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 Gene3D G3DSA:3.40.309.10 745 935 6.9E-41 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 PANTHER PTHR11699 524 955 5.1E-95 T 23-04-2016 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 Pfam PF01619 Proline dehydrogenase 124 416 1.1E-62 T 23-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 SUPERFAMILY SSF51730 120 455 1.1E-71 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 Gene3D G3DSA:3.40.605.10 516 744 1.9E-44 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 Gene3D G3DSA:3.20.20.220 120 456 3.3E-67 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CFF04554_RS06395 2e1fd7c6e29f709e04bb6280960820fb 1167 SUPERFAMILY SSF53720 472 955 4.58E-96 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 Gene3D G3DSA:3.30.565.10 2 206 1.7E-75 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 PIRSF PIRSF002583 1 615 2.8E-192 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 PANTHER PTHR11528 3 615 5.9E-250 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 PRINTS PR00775 90kDa heat shock protein signature 182 200 9.1E-56 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 PRINTS PR00775 90kDa heat shock protein signature 72 89 9.1E-56 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 PRINTS PR00775 90kDa heat shock protein signature 2 22 9.1E-56 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 PRINTS PR00775 90kDa heat shock protein signature 117 139 9.1E-56 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 PRINTS PR00775 90kDa heat shock protein signature 90 107 9.1E-56 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 PRINTS PR00775 90kDa heat shock protein signature 23 45 9.1E-56 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 612 28.93 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 Pfam PF00183 Hsp90 protein 217 614 1.7E-98 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 163 1.0E-12 T 23-04-2016 CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 PANTHER PTHR11528:SF44 3 615 5.9E-250 T 23-04-2016 CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 SUPERFAMILY SSF110942 502 612 1.44E-27 T 23-04-2016 CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 SUPERFAMILY SSF54211 229 481 4.17E-86 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 SUPERFAMILY SSF55874 2 206 9.69E-61 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS04785 6e1e47fb05feceee50a2af036aabaf49 615 SMART SM00387 24 178 0.0027 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01440 bb9a389a080881b00c62524734094ba4 226 PANTHER PTHR12029 1 219 7.3E-44 T 23-04-2016 CFF04554_RS01440 bb9a389a080881b00c62524734094ba4 226 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 73 8.1E-13 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CFF04554_RS01440 bb9a389a080881b00c62524734094ba4 226 SUPERFAMILY SSF75217 62 220 2.29E-36 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CFF04554_RS01440 bb9a389a080881b00c62524734094ba4 226 Pfam PF00588 SpoU rRNA Methylase family 84 219 3.0E-30 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CFF04554_RS01440 bb9a389a080881b00c62524734094ba4 226 Gene3D G3DSA:3.40.1280.10 78 223 5.6E-35 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFF04554_RS01440 bb9a389a080881b00c62524734094ba4 226 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 224 1.4E-51 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 CFF04554_RS01440 bb9a389a080881b00c62524734094ba4 226 SUPERFAMILY SSF55315 1 70 4.24E-12 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CFF04554_RS01440 bb9a389a080881b00c62524734094ba4 226 Gene3D G3DSA:3.30.1330.30 2 68 5.4E-12 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like CFF04554_RS01440 bb9a389a080881b00c62524734094ba4 226 SMART SM00967 2 74 2.3E-13 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 PANTHER PTHR20861 1 291 1.5E-61 T 23-04-2016 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 Gene3D G3DSA:3.30.230.10 2 151 4.4E-42 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 TIGRFAM TIGR00191 thrB: homoserine kinase 1 288 4.1E-71 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 SUPERFAMILY SSF55060 159 277 1.4E-24 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 Pfam PF00288 GHMP kinases N terminal domain 77 137 3.6E-10 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 PIRSF PIRSF000676 1 293 5.5E-75 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 Hamap MF_00384 Homoserine kinase [thrB]. 1 291 27.083 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 PANTHER PTHR20861:SF1 1 291 1.5E-61 T 23-04-2016 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 23-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 Gene3D G3DSA:3.30.70.890 156 287 5.5E-31 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 SUPERFAMILY SSF54211 2 144 9.87E-25 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 PRINTS PR00958 Homoserine kinase signature 242 257 3.2E-28 T 23-04-2016 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 PRINTS PR00958 Homoserine kinase signature 163 180 3.2E-28 T 23-04-2016 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 PRINTS PR00958 Homoserine kinase signature 124 137 3.2E-28 T 23-04-2016 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 PRINTS PR00958 Homoserine kinase signature 8 23 3.2E-28 T 23-04-2016 CFF04554_RS07610 3737525ccc3edac0f8a942dc6dafb479 293 PRINTS PR00958 Homoserine kinase signature 90 105 3.2E-28 T 23-04-2016 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 PANTHER PTHR30511 2 337 1.3E-55 T 23-04-2016 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 PANTHER PTHR30511:SF0 2 337 1.3E-55 T 23-04-2016 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 Pfam PF01168 Alanine racemase, N-terminal domain 8 214 3.1E-35 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 PRINTS PR00992 Alanine racemase signature 109 121 4.0E-24 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 PRINTS PR00992 Alanine racemase signature 142 153 4.0E-24 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 PRINTS PR00992 Alanine racemase signature 258 273 4.0E-24 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 PRINTS PR00992 Alanine racemase signature 188 215 4.0E-24 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 PRINTS PR00992 Alanine racemase signature 241 256 4.0E-24 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 PRINTS PR00992 Alanine racemase signature 25 41 4.0E-24 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 SUPERFAMILY SSF50621 211 337 4.88E-27 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 SMART SM01005 225 337 1.0E-27 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 Hamap MF_01201 Alanine racemase. 6 337 19.402 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 Gene3D G3DSA:3.20.20.10 10 209 1.7E-38 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 Gene3D G3DSA:2.40.37.10 210 337 2.3E-26 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 Pfam PF00842 Alanine racemase, C-terminal domain 226 335 2.4E-18 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS08025 2ff48fc53b4469c7ed8ccb8bb8a87d0a 337 SUPERFAMILY SSF51419 8 218 7.48E-36 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 Pfam PF00199 Catalase 7 387 1.0E-185 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 PANTHER PTHR11465 7 475 9.5E-278 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 Pfam PF06628 Catalase-related immune-responsive 415 474 2.3E-16 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 Gene3D G3DSA:2.40.180.10 3 355 8.3E-176 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 331 339 - T 23-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 SMART SM01060 6 390 2.6E-281 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 PRINTS PR00067 Catalase signature 318 344 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 PRINTS PR00067 Catalase signature 102 119 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 PRINTS PR00067 Catalase signature 81 99 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 PRINTS PR00067 Catalase signature 121 139 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 PRINTS PR00067 Catalase signature 19 42 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 PRINTS PR00067 Catalase signature 286 313 1.3E-70 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 SUPERFAMILY SSF56634 4 475 4.71E-200 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS05235 be474fdbb99d4533a4a485eb01339aa7 480 PIRSF PIRSF038928 1 480 2.6E-218 T 23-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS03575 8b9acfdb397c534d2ae5044667715044 151 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 5 130 7.0E-50 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CFF04554_RS03575 8b9acfdb397c534d2ae5044667715044 151 PANTHER PTHR30308 3 151 1.3E-63 T 23-04-2016 CFF04554_RS03575 8b9acfdb397c534d2ae5044667715044 151 SUPERFAMILY SSF74982 4 130 5.75E-45 T 23-04-2016 IPR023620 Small protein B CFF04554_RS03575 8b9acfdb397c534d2ae5044667715044 151 Hamap MF_00023 SsrA-binding protein [smpB]. 1 151 64.249 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CFF04554_RS03575 8b9acfdb397c534d2ae5044667715044 151 Gene3D G3DSA:2.40.280.10 5 125 1.5E-46 T 23-04-2016 IPR023620 Small protein B CFF04554_RS03575 8b9acfdb397c534d2ae5044667715044 151 TIGRFAM TIGR00086 smpB: SsrA-binding protein 5 148 2.3E-53 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CFF04554_RS03575 8b9acfdb397c534d2ae5044667715044 151 ProSitePatterns PS01317 SsrA-binding protein. 23 35 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site CFF04554_RS03575 8b9acfdb397c534d2ae5044667715044 151 Pfam PF01668 SmpB protein 6 67 1.4E-27 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 CFF04554_RS03575 8b9acfdb397c534d2ae5044667715044 151 PANTHER PTHR30308:SF2 3 151 1.3E-63 T 23-04-2016 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 Gene3D G3DSA:3.40.50.1980 26 222 1.1E-76 T 23-04-2016 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 Gene3D G3DSA:3.40.50.1980 223 372 9.2E-65 T 23-04-2016 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PANTHER PTHR21256 1 427 2.7E-190 T 23-04-2016 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 Pfam PF00815 Histidinol dehydrogenase 20 425 5.7E-166 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 SUPERFAMILY SSF53720 13 426 1.77E-78 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 425 2.3E-159 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PIRSF PIRSF000099 2 428 3.9E-165 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 426 40.246 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 9.3E-77 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 9.3E-77 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PRINTS PR00083 Histidinol dehydrogenase signature 319 344 9.3E-77 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 9.3E-77 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PRINTS PR00083 Histidinol dehydrogenase signature 250 269 9.3E-77 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PRINTS PR00083 Histidinol dehydrogenase signature 135 161 9.3E-77 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PRINTS PR00083 Histidinol dehydrogenase signature 228 249 9.3E-77 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS02560 110bdddbed04f11b538d850f8deb9d0f 428 PRINTS PR00083 Histidinol dehydrogenase signature 360 378 9.3E-77 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 PANTHER PTHR30435 1 130 9.0E-67 T 23-04-2016 CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 PANTHER PTHR30435 420 545 9.0E-67 T 23-04-2016 CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 463 544 1.6E-18 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 SUPERFAMILY SSF117143 171 213 6.93E-45 T 23-04-2016 CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 SUPERFAMILY SSF117143 86 140 6.93E-45 T 23-04-2016 CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 SUPERFAMILY SSF117143 299 506 6.93E-45 T 23-04-2016 CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 287 526 3.7E-26 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 279 5.5E-37 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 PANTHER PTHR30435:SF1 1 130 9.0E-67 T 23-04-2016 CFF04554_RS00040 66ec5ab726018e5c2677a04afe8716d2 546 PANTHER PTHR30435:SF1 420 545 9.0E-67 T 23-04-2016 CFF04554_RS02295 8e5acf639c9c792aecdd74bee2da1107 433 Gene3D G3DSA:1.20.1600.10 16 418 3.5E-55 T 23-04-2016 CFF04554_RS02295 8e5acf639c9c792aecdd74bee2da1107 433 SUPERFAMILY SSF56954 6 418 2.22E-64 T 23-04-2016 CFF04554_RS02295 8e5acf639c9c792aecdd74bee2da1107 433 Pfam PF02321 Outer membrane efflux protein 22 211 3.7E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CFF04554_RS02295 8e5acf639c9c792aecdd74bee2da1107 433 Pfam PF02321 Outer membrane efflux protein 242 417 6.6E-26 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CFF04554_RS02295 8e5acf639c9c792aecdd74bee2da1107 433 PANTHER PTHR30026:SF3 1 431 8.0E-37 T 23-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CFF04554_RS02295 8e5acf639c9c792aecdd74bee2da1107 433 PANTHER PTHR30026 1 431 8.0E-37 T 23-04-2016 CFF04554_RS03600 862fb5d8fda0e0bb4e7e6533ba1cc491 290 Gene3D G3DSA:1.10.10.10 4 89 2.0E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS03600 862fb5d8fda0e0bb4e7e6533ba1cc491 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CFF04554_RS03600 862fb5d8fda0e0bb4e7e6533ba1cc491 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CFF04554_RS03600 862fb5d8fda0e0bb4e7e6533ba1cc491 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.5E-6 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CFF04554_RS03600 862fb5d8fda0e0bb4e7e6533ba1cc491 290 SUPERFAMILY SSF53850 93 270 1.99E-9 T 23-04-2016 CFF04554_RS03600 862fb5d8fda0e0bb4e7e6533ba1cc491 290 SUPERFAMILY SSF46785 4 88 8.06E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS03600 862fb5d8fda0e0bb4e7e6533ba1cc491 290 Gene3D G3DSA:3.40.190.10 94 189 1.4E-4 T 23-04-2016 CFF04554_RS03600 862fb5d8fda0e0bb4e7e6533ba1cc491 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.7E-17 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CFF04554_RS03600 862fb5d8fda0e0bb4e7e6533ba1cc491 290 PANTHER PTHR30126 3 273 1.2E-39 T 23-04-2016 CFF04554_RS00655 c077141da471e2ad076c35b843b50c3f 306 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 197 210 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 CFF04554_RS00655 c077141da471e2ad076c35b843b50c3f 306 Pfam PF00146 NADH dehydrogenase 8 301 1.3E-51 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CFF04554_RS00655 c077141da471e2ad076c35b843b50c3f 306 PANTHER PTHR11432 1 303 5.7E-69 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CFF04554_RS00655 c077141da471e2ad076c35b843b50c3f 306 PANTHER PTHR11432:SF1 1 303 5.7E-69 T 23-04-2016 CFF04554_RS02895 cff3e940815486f2f842309b8c45a887 360 SUPERFAMILY SSF102114 16 347 5.1E-40 T 23-04-2016 CFF04554_RS02895 cff3e940815486f2f842309b8c45a887 360 PIRSF PIRSF004762 1 360 1.6E-101 T 23-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 CFF04554_RS02895 cff3e940815486f2f842309b8c45a887 360 Gene3D G3DSA:3.20.20.70 20 348 4.1E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS02895 cff3e940815486f2f842309b8c45a887 360 PANTHER PTHR22976:SF4 2 360 4.0E-118 T 23-04-2016 CFF04554_RS02895 cff3e940815486f2f842309b8c45a887 360 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 45 356 7.6E-115 T 23-04-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 CFF04554_RS02895 cff3e940815486f2f842309b8c45a887 360 PANTHER PTHR22976 2 360 4.0E-118 T 23-04-2016 CFF04554_RS02895 cff3e940815486f2f842309b8c45a887 360 Pfam PF04055 Radical SAM superfamily 53 222 1.6E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS02895 cff3e940815486f2f842309b8c45a887 360 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 1 359 49.286 T 23-04-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CFF04554_RS02895 cff3e940815486f2f842309b8c45a887 360 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 4 356 2.8E-142 T 23-04-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CFF04554_RS08830 bd0e14abfaf24fd1895aad5fdfaf63ba 546 SUPERFAMILY SSF52540 7 270 5.31E-117 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08830 bd0e14abfaf24fd1895aad5fdfaf63ba 546 PANTHER PTHR11550 1 539 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CFF04554_RS08830 bd0e14abfaf24fd1895aad5fdfaf63ba 546 Hamap MF_01227 CTP synthase [pyrG]. 7 544 50.207 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CFF04554_RS08830 bd0e14abfaf24fd1895aad5fdfaf63ba 546 SUPERFAMILY SSF52317 293 543 1.27E-73 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS08830 bd0e14abfaf24fd1895aad5fdfaf63ba 546 TIGRFAM TIGR00337 PyrG: CTP synthase 6 539 2.1E-240 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CFF04554_RS08830 bd0e14abfaf24fd1895aad5fdfaf63ba 546 Pfam PF00117 Glutamine amidotransferase class-I 305 539 1.2E-54 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CFF04554_RS08830 bd0e14abfaf24fd1895aad5fdfaf63ba 546 Pfam PF06418 CTP synthase N-terminus 8 270 5.8E-122 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CFF04554_RS08830 bd0e14abfaf24fd1895aad5fdfaf63ba 546 Gene3D G3DSA:3.40.50.300 5 287 3.7E-130 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08830 bd0e14abfaf24fd1895aad5fdfaf63ba 546 Gene3D G3DSA:3.40.50.880 292 544 6.2E-95 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 SUPERFAMILY SSF88659 96 156 2.53E-6 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 202 228 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 PRINTS PR00046 Major sigma-70 factor signature 217 228 1.8E-7 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 PRINTS PR00046 Major sigma-70 factor signature 94 107 1.8E-7 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 PRINTS PR00046 Major sigma-70 factor signature 185 197 1.8E-7 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 PRINTS PR00046 Major sigma-70 factor signature 202 217 1.8E-7 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 Gene3D G3DSA:1.10.10.10 169 233 4.4E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 SUPERFAMILY SSF88659 163 232 9.91E-18 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 PANTHER PTHR30385:SF7 20 233 2.2E-29 T 23-04-2016 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 232 5.7E-32 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 23 232 1.4E-58 T 23-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 SUPERFAMILY SSF88946 17 93 5.3E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 PANTHER PTHR30385 20 233 2.2E-29 T 23-04-2016 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 Pfam PF04545 Sigma-70, region 4 182 230 2.3E-16 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS07690 abd54870b30169e33c6628b8dbe85ff9 234 Pfam PF04542 Sigma-70 region 2 23 92 5.3E-9 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 Pfam PF01479 S4 domain 11 56 1.4E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 130 144 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 SMART SM00363 10 67 4.1E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 Pfam PF00849 RNA pseudouridylate synthase 84 237 1.2E-25 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 293 3.0E-76 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 SUPERFAMILY SSF55120 72 293 1.92E-62 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 PANTHER PTHR11079:SF73 11 307 3.5E-85 T 23-04-2016 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 PANTHER PTHR11079 11 307 3.5E-85 T 23-04-2016 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 Gene3D G3DSA:3.10.290.10 9 58 5.8E-14 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS06290 34698b6f3b87979d959ea227d3385d3b 323 SUPERFAMILY SSF55174 8 99 1.13E-13 T 23-04-2016 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 111 3.1E-12 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 175 197 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 Gene3D G3DSA:3.40.50.720 1 140 9.3E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 PANTHER PTHR21499:SF2 1 361 2.2E-115 T 23-04-2016 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 Gene3D G3DSA:3.30.70.260 340 404 6.2E-7 T 23-04-2016 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 Gene3D G3DSA:3.30.360.10 141 290 2.7E-56 T 23-04-2016 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 PIRSF PIRSF000098 1 422 6.6E-154 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 SUPERFAMILY SSF55347 129 294 1.7E-52 T 23-04-2016 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 PANTHER PTHR21499 1 361 2.2E-115 T 23-04-2016 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 Pfam PF01842 ACT domain 341 406 2.3E-8 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 Pfam PF00742 Homoserine dehydrogenase 129 307 1.4E-61 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 SUPERFAMILY SSF55021 339 403 2.18E-7 T 23-04-2016 CFF04554_RS01460 f810af80408d229ec6daac1b7eeb190d 422 SUPERFAMILY SSF51735 1 150 3.88E-29 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03485 ef528406400cd0b56db33ee4e1a315a4 459 PANTHER PTHR11748 1 457 2.7E-151 T 23-04-2016 CFF04554_RS03485 ef528406400cd0b56db33ee4e1a315a4 459 Pfam PF02913 FAD linked oxidases, C-terminal domain 215 456 6.3E-66 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CFF04554_RS03485 ef528406400cd0b56db33ee4e1a315a4 459 Gene3D G3DSA:3.30.43.10 3 95 2.8E-29 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CFF04554_RS03485 ef528406400cd0b56db33ee4e1a315a4 459 Pfam PF01565 FAD binding domain 39 178 6.0E-40 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CFF04554_RS03485 ef528406400cd0b56db33ee4e1a315a4 459 SUPERFAMILY SSF55103 219 458 1.01E-68 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CFF04554_RS03485 ef528406400cd0b56db33ee4e1a315a4 459 SUPERFAMILY SSF56176 5 216 4.49E-67 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CFF04554_RS03485 ef528406400cd0b56db33ee4e1a315a4 459 Gene3D G3DSA:3.30.465.10 96 216 7.1E-40 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CFF04554_RS03485 ef528406400cd0b56db33ee4e1a315a4 459 Gene3D G3DSA:1.10.45.10 418 459 7.8E-16 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CFF04554_RS03485 ef528406400cd0b56db33ee4e1a315a4 459 PANTHER PTHR11748:SF85 1 457 2.7E-151 T 23-04-2016 CFF04554_RS04860 a9625bccb85cca58d9afd9c1b9ddf26b 365 Pfam PF13682 Chemoreceptor zinc-binding domain 269 322 1.2E-10 T 23-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 CFF04554_RS04860 a9625bccb85cca58d9afd9c1b9ddf26b 365 PANTHER PTHR32089 51 247 4.0E-42 T 23-04-2016 CFF04554_RS04860 a9625bccb85cca58d9afd9c1b9ddf26b 365 Gene3D G3DSA:1.10.287.950 61 247 3.3E-46 T 23-04-2016 CFF04554_RS04860 a9625bccb85cca58d9afd9c1b9ddf26b 365 SUPERFAMILY SSF58104 36 277 1.09E-50 T 23-04-2016 CFF04554_RS04860 a9625bccb85cca58d9afd9c1b9ddf26b 365 SMART SM00283 45 305 1.1E-24 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS04860 a9625bccb85cca58d9afd9c1b9ddf26b 365 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 109 247 6.1E-36 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS06805 3831d268c28a0712881ad7e428c1450a 227 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 1 222 2.1E-45 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS06805 3831d268c28a0712881ad7e428c1450a 227 PANTHER PTHR32119:SF2 1 227 8.0E-68 T 23-04-2016 CFF04554_RS06805 3831d268c28a0712881ad7e428c1450a 227 SMART SM00934 2 222 3.9E-73 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS06805 3831d268c28a0712881ad7e428c1450a 227 SUPERFAMILY SSF51366 2 223 9.7E-62 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CFF04554_RS06805 3831d268c28a0712881ad7e428c1450a 227 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 55 68 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS06805 3831d268c28a0712881ad7e428c1450a 227 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 227 32.424 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS06805 3831d268c28a0712881ad7e428c1450a 227 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 3 222 4.1E-67 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS06805 3831d268c28a0712881ad7e428c1450a 227 PANTHER PTHR32119 1 227 8.0E-68 T 23-04-2016 CFF04554_RS06805 3831d268c28a0712881ad7e428c1450a 227 Gene3D G3DSA:3.20.20.70 2 224 2.4E-73 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 PANTHER PTHR10314:SF110 1 304 5.6E-150 T 23-04-2016 CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 Gene3D G3DSA:3.40.50.1100 1 40 1.9E-76 T 23-04-2016 CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 Gene3D G3DSA:3.40.50.1100 148 303 1.9E-76 T 23-04-2016 CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 292 7.7E-70 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 PANTHER PTHR10314 1 304 5.6E-150 T 23-04-2016 CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 SUPERFAMILY SSF53686 1 303 2.23E-102 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 9.4E-134 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 Gene3D G3DSA:3.40.50.1100 41 142 2.4E-36 T 23-04-2016 CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CFF04554_RS04605 1c8cb59e54e027263d9cd89dbc5f17cb 304 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 3.3E-128 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CFF04554_RS05205 79b50992baf0d70d9a59ae8809e1da85 244 SUPERFAMILY SSF75708 65 242 2.48E-31 T 23-04-2016 CFF04554_RS05205 79b50992baf0d70d9a59ae8809e1da85 244 Gene3D G3DSA:1.10.287.500 79 202 4.1E-5 T 23-04-2016 CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 PANTHER PTHR32479:SF10 17 470 1.7E-139 T 23-04-2016 CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 Gene3D G3DSA:3.40.50.10420 184 290 1.8E-42 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 Gene3D G3DSA:3.40.50.10420 60 123 1.8E-42 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 Pfam PF13183 4Fe-4S dicluster domain 305 372 8.9E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 67 289 7.6E-48 T 23-04-2016 IPR003741 LUD domain CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 Gene3D G3DSA:1.10.1060.10 298 392 1.4E-14 T 23-04-2016 CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 Pfam PF11870 Domain of unknown function (DUF3390) 380 470 2.7E-17 T 23-04-2016 IPR024569 4Fe-4S binding protein, C-terminal CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 358 369 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 308 319 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 PANTHER PTHR32479 17 470 1.7E-139 T 23-04-2016 CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 SUPERFAMILY SSF100950 130 290 7.95E-36 T 23-04-2016 CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 SUPERFAMILY SSF100950 60 84 7.95E-36 T 23-04-2016 CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 13 455 5.0E-170 T 23-04-2016 IPR004452 4Fe-4S binding protein GO:0019516 CFF04554_RS04430 494b144afba5a5a125faa3ec195d922c 474 SUPERFAMILY SSF46548 260 384 2.27E-20 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CFF04554_RS04900 52089c845d67ac17ebd13e88c2d7cf5e 356 SUPERFAMILY SSF56014 257 340 6.02E-7 T 23-04-2016 CFF04554_RS04900 52089c845d67ac17ebd13e88c2d7cf5e 356 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 1 350 32.34 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CFF04554_RS04900 52089c845d67ac17ebd13e88c2d7cf5e 356 Pfam PF04551 GcpE protein 6 345 3.5E-126 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CFF04554_RS04900 52089c845d67ac17ebd13e88c2d7cf5e 356 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3 344 1.7E-114 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CFF04554_RS04900 52089c845d67ac17ebd13e88c2d7cf5e 356 Gene3D G3DSA:3.20.20.120 60 129 8.2E-6 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CFF04554_RS04900 52089c845d67ac17ebd13e88c2d7cf5e 356 PANTHER PTHR30454 1 352 2.4E-152 T 23-04-2016 CFF04554_RS04900 52089c845d67ac17ebd13e88c2d7cf5e 356 SUPERFAMILY SSF51717 10 206 2.04E-8 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CFF04554_RS04900 52089c845d67ac17ebd13e88c2d7cf5e 356 PIRSF PIRSF004640 1 355 6.5E-139 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CFF04554_RS00585 c891d58b426499a0bc607d7ca585d807 518 SUPERFAMILY SSF161098 276 505 1.31E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00585 c891d58b426499a0bc607d7ca585d807 518 Gene3D G3DSA:1.10.3720.10 5 239 1.0E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00585 c891d58b426499a0bc607d7ca585d807 518 Gene3D G3DSA:1.10.3720.10 273 515 6.6E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00585 c891d58b426499a0bc607d7ca585d807 518 SUPERFAMILY SSF161098 4 241 6.98E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00585 c891d58b426499a0bc607d7ca585d807 518 PANTHER PTHR30183:SF2 8 516 6.1E-110 T 23-04-2016 CFF04554_RS00585 c891d58b426499a0bc607d7ca585d807 518 PANTHER PTHR30183 8 516 6.1E-110 T 23-04-2016 CFF04554_RS00585 c891d58b426499a0bc607d7ca585d807 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 327 512 1.1E-5 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00585 c891d58b426499a0bc607d7ca585d807 518 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 239 1.6E-8 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS01850 e7986adef52eae733e1f36bf63b2209a 283 Gene3D G3DSA:3.30.930.10 25 278 2.0E-26 T 23-04-2016 CFF04554_RS01850 e7986adef52eae733e1f36bf63b2209a 283 PANTHER PTHR11476 8 173 1.2E-15 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CFF04554_RS01850 e7986adef52eae733e1f36bf63b2209a 283 Pfam PF13393 Histidyl-tRNA synthetase 24 203 1.7E-17 T 23-04-2016 CFF04554_RS01850 e7986adef52eae733e1f36bf63b2209a 283 PANTHER PTHR11476:SF5 8 173 1.2E-15 T 23-04-2016 CFF04554_RS01850 e7986adef52eae733e1f36bf63b2209a 283 SUPERFAMILY SSF55681 11 261 6.01E-30 T 23-04-2016 CFF04554_RS02445 b87b9f4017c981ad4c6c1a670aaff5a9 371 PANTHER PTHR12526:SF380 5 133 4.9E-44 T 23-04-2016 CFF04554_RS02445 b87b9f4017c981ad4c6c1a670aaff5a9 371 PANTHER PTHR12526:SF380 151 363 4.9E-44 T 23-04-2016 CFF04554_RS02445 b87b9f4017c981ad4c6c1a670aaff5a9 371 PANTHER PTHR12526 151 363 4.9E-44 T 23-04-2016 CFF04554_RS02445 b87b9f4017c981ad4c6c1a670aaff5a9 371 PANTHER PTHR12526 5 133 4.9E-44 T 23-04-2016 CFF04554_RS02445 b87b9f4017c981ad4c6c1a670aaff5a9 371 SUPERFAMILY SSF53756 4 353 8.64E-58 T 23-04-2016 CFF04554_RS02445 b87b9f4017c981ad4c6c1a670aaff5a9 371 Pfam PF13439 Glycosyltransferase Family 4 55 192 2.0E-12 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS02445 b87b9f4017c981ad4c6c1a670aaff5a9 371 Pfam PF00534 Glycosyl transferases group 1 193 333 2.9E-28 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS02445 b87b9f4017c981ad4c6c1a670aaff5a9 371 Gene3D G3DSA:3.40.50.2000 196 328 4.7E-18 T 23-04-2016 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 PANTHER PTHR11946 1 785 0.0 T 23-04-2016 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 PANTHER PTHR11946 802 866 0.0 T 23-04-2016 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 SUPERFAMILY SSF50677 193 342 5.36E-60 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 809 870 8.6E-13 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 871 14.523 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 PANTHER PTHR11946:SF5 1 785 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 PANTHER PTHR11946:SF5 802 866 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 Gene3D G3DSA:1.10.730.10 571 741 7.3E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 Gene3D G3DSA:3.40.50.620 342 570 2.1E-133 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 Gene3D G3DSA:3.40.50.620 4 195 2.1E-133 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 572 5.2E-181 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 Pfam PF08264 Anticodon-binding domain of tRNA 614 752 1.0E-26 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 SUPERFAMILY SSF46589 806 870 3.87E-12 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 Gene3D G3DSA:3.90.740.10 196 339 5.3E-50 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 SUPERFAMILY SSF52374 342 582 3.75E-129 T 23-04-2016 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 SUPERFAMILY SSF52374 1 194 3.75E-129 T 23-04-2016 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 TIGRFAM TIGR00422 valS: valine--tRNA ligase 2 852 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 PRINTS PR00986 Valyl-tRNA synthetase signature 347 360 2.5E-26 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 2.5E-26 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 PRINTS PR00986 Valyl-tRNA synthetase signature 232 249 2.5E-26 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 PRINTS PR00986 Valyl-tRNA synthetase signature 444 465 2.5E-26 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CFF04554_RS04815 ec1cee759b4d7212eb8497085e072a51 873 SUPERFAMILY SSF47323 584 791 4.11E-38 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS01215 bb6b7bcb0180343c33c209eb3e6238f4 83 PANTHER PTHR24960 1 75 2.2E-15 T 23-04-2016 CFF04554_RS01215 bb6b7bcb0180343c33c209eb3e6238f4 83 Pfam PF00037 4Fe-4S binding domain 7 25 9.7E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS01215 bb6b7bcb0180343c33c209eb3e6238f4 83 SUPERFAMILY SSF54862 5 74 6.16E-17 T 23-04-2016 CFF04554_RS01215 bb6b7bcb0180343c33c209eb3e6238f4 83 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS01215 bb6b7bcb0180343c33c209eb3e6238f4 83 PANTHER PTHR24960:SF38 1 75 2.2E-15 T 23-04-2016 CFF04554_RS01215 bb6b7bcb0180343c33c209eb3e6238f4 83 Gene3D G3DSA:3.30.70.20 4 73 1.9E-16 T 23-04-2016 CFF04554_RS07260 b5dda384c3f68db5933de79ff28b7120 83 SUPERFAMILY SSF47413 16 82 1.6E-7 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CFF04554_RS07260 b5dda384c3f68db5933de79ff28b7120 83 Gene3D G3DSA:1.10.260.40 20 83 1.3E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CFF04554_RS00820 3968259e6acf5f7f9e55a92ea84320bd 165 Pfam PF12838 4Fe-4S dicluster domain 77 132 9.7E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00820 3968259e6acf5f7f9e55a92ea84320bd 165 SUPERFAMILY SSF54862 55 139 1.26E-20 T 23-04-2016 CFF04554_RS00820 3968259e6acf5f7f9e55a92ea84320bd 165 PANTHER PTHR10849:SF13 16 136 1.3E-30 T 23-04-2016 CFF04554_RS00820 3968259e6acf5f7f9e55a92ea84320bd 165 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 18 162 26.001 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 CFF04554_RS00820 3968259e6acf5f7f9e55a92ea84320bd 165 PANTHER PTHR10849 16 136 1.3E-30 T 23-04-2016 CFF04554_RS00820 3968259e6acf5f7f9e55a92ea84320bd 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 118 129 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00820 3968259e6acf5f7f9e55a92ea84320bd 165 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00820 3968259e6acf5f7f9e55a92ea84320bd 165 Gene3D G3DSA:3.30.70.20 64 135 4.6E-16 T 23-04-2016 CFF04554_RS06195 9d58ab5e16f1b9ece4a3219016910284 257 SUPERFAMILY SSF52540 2 231 1.22E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06195 9d58ab5e16f1b9ece4a3219016910284 257 Gene3D G3DSA:3.40.50.300 2 229 2.6E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06195 9d58ab5e16f1b9ece4a3219016910284 257 SMART SM00382 27 215 3.7E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS06195 9d58ab5e16f1b9ece4a3219016910284 257 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS06195 9d58ab5e16f1b9ece4a3219016910284 257 PANTHER PTHR24220:SF582 4 254 7.5E-84 T 23-04-2016 CFF04554_RS06195 9d58ab5e16f1b9ece4a3219016910284 257 Pfam PF00005 ABC transporter 18 166 8.4E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS06195 9d58ab5e16f1b9ece4a3219016910284 257 PANTHER PTHR24220 4 254 7.5E-84 T 23-04-2016 CFF04554_RS03445 c1771055d5d607af1b972467c931cc15 87 Gene3D G3DSA:1.10.3350.10 4 87 6.4E-19 T 23-04-2016 IPR023126 HP0242-like domain CFF04554_RS03445 c1771055d5d607af1b972467c931cc15 87 Pfam PF09442 Domain of unknown function (DUF2018) 8 87 7.3E-29 T 23-04-2016 IPR018563 Protein of unknown function DUF2018 CFF04554_RS03445 c1771055d5d607af1b972467c931cc15 87 SUPERFAMILY SSF158752 3 86 2.35E-29 T 23-04-2016 CFF04554_RS05030 af422947ef0c88e0061bab1525d3e5e5 148 Gene3D G3DSA:1.10.1510.10 1 90 7.3E-30 T 23-04-2016 CFF04554_RS05030 af422947ef0c88e0061bab1525d3e5e5 148 Pfam PF09424 Yqey-like protein 4 146 5.2E-42 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial CFF04554_RS05030 af422947ef0c88e0061bab1525d3e5e5 148 Gene3D G3DSA:1.10.10.410 91 146 1.9E-9 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CFF04554_RS05030 af422947ef0c88e0061bab1525d3e5e5 148 PANTHER PTHR28055:SF1 1 146 1.4E-39 T 23-04-2016 CFF04554_RS05030 af422947ef0c88e0061bab1525d3e5e5 148 SUPERFAMILY SSF89095 1 146 3.35E-32 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CFF04554_RS05030 af422947ef0c88e0061bab1525d3e5e5 148 PANTHER PTHR28055 1 146 1.4E-39 T 23-04-2016 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 SMART SM00279 168 203 1.7E-15 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 SMART SM00482 641 839 3.1E-79 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PANTHER PTHR10133 2 875 2.5E-284 T 23-04-2016 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Gene3D G3DSA:3.40.50.1010 3 180 1.0E-55 T 23-04-2016 IPR029060 PIN domain-like CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 SMART SM00474 293 474 1.2E-23 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 250 1.8E-27 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Gene3D G3DSA:1.10.150.20 667 769 1.3E-33 T 23-04-2016 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 SMART SM00475 1 256 1.8E-93 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Gene3D G3DSA:1.10.150.20 181 241 7.5E-27 T 23-04-2016 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 SUPERFAMILY SSF47807 166 271 5.08E-27 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PANTHER PTHR10133:SF27 2 875 2.5E-284 T 23-04-2016 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 SUPERFAMILY SSF56672 477 875 2.78E-128 T 23-04-2016 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 811 1.3E-58 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 764 775 1.3E-58 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 678 1.3E-58 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 835 1.3E-58 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 730 1.3E-58 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 742 753 1.3E-58 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 633 648 1.3E-58 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 610 632 1.3E-58 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Gene3D G3DSA:3.30.420.10 294 496 6.4E-51 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Pfam PF00476 DNA polymerase family A 513 873 4.2E-130 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 SUPERFAMILY SSF53098 294 475 1.23E-32 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 TIGRFAM TIGR00593 pola: DNA polymerase I 4 875 1.2E-257 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 165 1.2E-42 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Pfam PF01612 3'-5' exonuclease 297 474 2.8E-23 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Gene3D G3DSA:1.20.1060.10 498 617 8.8E-38 T 23-04-2016 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Gene3D G3DSA:3.30.70.370 618 666 1.9E-55 T 23-04-2016 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 Gene3D G3DSA:3.30.70.370 770 874 1.9E-55 T 23-04-2016 CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 SUPERFAMILY SSF88723 1 165 9.03E-45 T 23-04-2016 IPR029060 PIN domain-like CFF04554_RS01140 0fc18e228666a791c883983f5286784b 875 ProSitePatterns PS00447 DNA polymerase family A signature. 705 724 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS04520 a94df803fd013e9ae36a4c4857c2d4ac 113 PANTHER PTHR35342 1 113 2.0E-23 T 23-04-2016 CFF04554_RS04520 a94df803fd013e9ae36a4c4857c2d4ac 113 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 1 80 5.0E-20 T 23-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane CFF04554_RS03685 af9cd03ee00e2d3448eaaa394401bc30 389 SUPERFAMILY SSF53244 273 384 5.8E-15 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS03685 af9cd03ee00e2d3448eaaa394401bc30 389 Gene3D G3DSA:3.40.1190.10 4 257 3.3E-63 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS03685 af9cd03ee00e2d3448eaaa394401bc30 389 Pfam PF08245 Mur ligase middle domain 41 218 4.0E-6 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS03685 af9cd03ee00e2d3448eaaa394401bc30 389 Gene3D G3DSA:3.90.190.20 273 384 1.8E-16 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS03685 af9cd03ee00e2d3448eaaa394401bc30 389 SUPERFAMILY SSF53623 7 252 1.26E-52 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS03685 af9cd03ee00e2d3448eaaa394401bc30 389 PANTHER PTHR11136:SF0 37 347 2.2E-53 T 23-04-2016 CFF04554_RS03685 af9cd03ee00e2d3448eaaa394401bc30 389 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 384 1.8E-77 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CFF04554_RS03685 af9cd03ee00e2d3448eaaa394401bc30 389 PANTHER PTHR11136 37 347 2.2E-53 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CFF04554_RS04945 704ffb021f6683d6dbacefb1523b158b 147 Gene3D G3DSA:1.10.10.10 62 144 1.6E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS04945 704ffb021f6683d6dbacefb1523b158b 147 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 64 143 6.8E-31 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CFF04554_RS04945 704ffb021f6683d6dbacefb1523b158b 147 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 64 144 6.0E-28 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CFF04554_RS04945 704ffb021f6683d6dbacefb1523b158b 147 SUPERFAMILY SSF53155 1 68 2.12E-9 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 CFF04554_RS04945 704ffb021f6683d6dbacefb1523b158b 147 PANTHER PTHR10815 1 145 4.7E-50 T 23-04-2016 CFF04554_RS04945 704ffb021f6683d6dbacefb1523b158b 147 PANTHER PTHR10815:SF5 1 145 4.7E-50 T 23-04-2016 CFF04554_RS04945 704ffb021f6683d6dbacefb1523b158b 147 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 146 35.516 T 23-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CFF04554_RS04945 704ffb021f6683d6dbacefb1523b158b 147 SUPERFAMILY SSF46767 62 144 1.1E-26 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CFF04554_RS04945 704ffb021f6683d6dbacefb1523b158b 147 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 113 119 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 224 240 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 PANTHER PTHR11557 1 302 2.8E-120 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 220 286 2.7E-10 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 SUPERFAMILY SSF54782 213 298 8.24E-20 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 PRINTS PR00151 Porphobilinogen deaminase signature 119 136 3.3E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 PRINTS PR00151 Porphobilinogen deaminase signature 138 155 3.3E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 PRINTS PR00151 Porphobilinogen deaminase signature 40 60 3.3E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 PRINTS PR00151 Porphobilinogen deaminase signature 223 240 3.3E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 PRINTS PR00151 Porphobilinogen deaminase signature 71 90 3.3E-43 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 Gene3D G3DSA:3.40.190.10 106 193 2.1E-33 T 23-04-2016 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 3 203 5.7E-72 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 SUPERFAMILY SSF53850 2 204 2.35E-73 T 23-04-2016 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 Gene3D G3DSA:3.40.190.10 2 105 4.2E-45 T 23-04-2016 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 3 290 7.0E-99 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 290 35.009 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 PIRSF PIRSF001438 1 303 5.5E-106 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS03475 fe8e1ef0cad05d1c5ed8fb926bbe60d7 303 Gene3D G3DSA:3.30.160.40 214 298 8.1E-19 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 SMART SM00739 121 148 0.0014 T 23-04-2016 IPR005824 KOW CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 Pfam PF00467 KOW motif 125 146 7.3E-5 T 23-04-2016 IPR005824 KOW CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 175 3.6E-59 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 Gene3D G3DSA:2.30.30.30 115 175 1.9E-27 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 SMART SM00738 2 110 5.0E-37 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 PANTHER PTHR30265 4 175 4.0E-57 T 23-04-2016 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 PRINTS PR00338 Transcription termination factor NUSG signature 133 148 1.2E-15 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 PRINTS PR00338 Transcription termination factor NUSG signature 151 167 1.2E-15 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.2E-15 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 158 167 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 SUPERFAMILY SSF82679 3 111 2.62E-32 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 SUPERFAMILY SSF50104 119 175 2.11E-16 T 23-04-2016 IPR008991 Translation protein SH3-like domain CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 Pfam PF02357 Transcription termination factor nusG 4 106 1.6E-22 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 Gene3D G3DSA:3.30.70.940 3 112 4.5E-34 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 CFF04554_RS06750 171cfd2343197d1635678b06d99f242b 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 175 20.246 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 10 1371 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Pfam PF04561 RNA polymerase Rpb2, domain 2 155 228 3.8E-12 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Pfam PF04561 RNA polymerase Rpb2, domain 2 373 468 1.3E-16 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:2.30.150.10 608 671 9.2E-21 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:3.90.1100.10 21 155 4.5E-133 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:3.90.1100.10 675 728 4.5E-133 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:3.90.1100.10 458 607 4.5E-133 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:3.90.1110.10 157 233 8.6E-59 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:3.90.1110.10 358 457 8.6E-59 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Pfam PF00562 RNA polymerase Rpb2, domain 6 734 1295 5.5E-145 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:2.40.50.150 1075 1089 3.5E-48 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:2.40.50.150 840 949 3.5E-48 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1374 11.583 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:2.40.50.100 731 804 6.5E-24 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 PANTHER PTHR20856:SF20 1063 1158 0.0 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 PANTHER PTHR20856:SF20 351 942 0.0 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 PANTHER PTHR20856:SF20 3 233 0.0 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 PANTHER PTHR20856:SF20 1214 1378 0.0 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Pfam PF04565 RNA polymerase Rpb2, domain 3 529 597 7.6E-31 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Pfam PF10385 RNA polymerase beta subunit external 1 domain 607 670 1.2E-18 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:2.40.270.10 805 832 4.0E-82 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Gene3D G3DSA:2.40.270.10 1090 1274 4.0E-82 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 SUPERFAMILY SSF64484 371 951 0.0 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 SUPERFAMILY SSF64484 12 229 0.0 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 SUPERFAMILY SSF64484 1069 1376 0.0 T 23-04-2016 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Pfam PF04560 RNA polymerase Rpb2, domain 7 1298 1373 4.5E-24 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 Pfam PF04563 RNA polymerase beta subunit 27 515 3.2E-22 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 PANTHER PTHR20856 1063 1158 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 PANTHER PTHR20856 351 942 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 PANTHER PTHR20856 3 233 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 PANTHER PTHR20856 1214 1378 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06725 868146b92e2f93e489fcd6ae74f1b670 1379 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1093 1105 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06885 8c96aa9f719d4695f249396bd777b370 275 PANTHER PTHR18895 68 270 8.9E-40 T 23-04-2016 CFF04554_RS06885 8c96aa9f719d4695f249396bd777b370 275 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 42 269 2.4E-52 T 23-04-2016 CFF04554_RS06885 8c96aa9f719d4695f249396bd777b370 275 Gene3D G3DSA:3.40.50.150 83 257 1.7E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS06885 8c96aa9f719d4695f249396bd777b370 275 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 1 269 26.984 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CFF04554_RS06885 8c96aa9f719d4695f249396bd777b370 275 PIRSF PIRSF000401 9 271 9.7E-60 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CFF04554_RS06885 8c96aa9f719d4695f249396bd777b370 275 PANTHER PTHR18895:SF3 68 270 8.9E-40 T 23-04-2016 CFF04554_RS06885 8c96aa9f719d4695f249396bd777b370 275 SUPERFAMILY SSF53335 42 252 1.17E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02805 5c6f2376613daf75b5431dd49f7ac9df 653 Pfam PF13515 Fusaric acid resistance protein-like 361 483 1.6E-12 T 23-04-2016 CFF04554_RS00390 8dd369ec5f160febeb001fece3ecd42f 276 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 264 2.3E-116 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CFF04554_RS00390 8dd369ec5f160febeb001fece3ecd42f 276 SUPERFAMILY SSF53448 4 269 6.31E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS00390 8dd369ec5f160febeb001fece3ecd42f 276 Pfam PF00483 Nucleotidyl transferase 9 267 1.4E-28 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CFF04554_RS00390 8dd369ec5f160febeb001fece3ecd42f 276 Gene3D G3DSA:3.90.550.10 4 270 3.7E-58 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS00390 8dd369ec5f160febeb001fece3ecd42f 276 PANTHER PTHR22572:SF14 4 270 7.7E-87 T 23-04-2016 CFF04554_RS00390 8dd369ec5f160febeb001fece3ecd42f 276 PANTHER PTHR22572 4 270 7.7E-87 T 23-04-2016 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 Pfam PF01979 Amidohydrolase family 48 418 7.9E-28 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 ProSitePatterns PS00482 Dihydroorotase signature 1. 55 63 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 PANTHER PTHR11647:SF70 1 420 1.2E-162 T 23-04-2016 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 17 418 1.8E-127 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 Gene3D G3DSA:3.20.20.140 65 383 2.4E-104 T 23-04-2016 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 SUPERFAMILY SSF51338 364 420 2.68E-25 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 SUPERFAMILY SSF51338 1 51 2.68E-25 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 Gene3D G3DSA:2.30.40.10 3 64 1.2E-21 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 422 39.347 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 SUPERFAMILY SSF51556 52 364 2.89E-108 T 23-04-2016 IPR032466 Metal-dependent hydrolase CFF04554_RS07525 04ff419336584a65c08d9d133c71e3b8 426 PANTHER PTHR11647 1 420 1.2E-162 T 23-04-2016 CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 309 378 1.5E-12 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 SMART SM00382 106 268 1.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 SMART SM01086 308 402 2.2E-28 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 Gene3D G3DSA:1.10.8.60 308 404 4.8E-34 T 23-04-2016 CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 SUPERFAMILY SSF52540 64 391 1.67E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 PANTHER PTHR11262:SF4 4 406 2.4E-205 T 23-04-2016 CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 PANTHER PTHR11262 4 406 2.4E-205 T 23-04-2016 CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 1 405 47.553 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 Gene3D G3DSA:3.40.50.300 60 248 4.6E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 Gene3D G3DSA:3.40.50.300 285 301 4.6E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 402 7.4E-179 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 Pfam PF07724 AAA domain (Cdc48 subfamily) 107 301 1.1E-47 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 SMART SM00994 2 43 2.6E-14 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CFF04554_RS01580 e79182a71cc53198b4b8e76dffc7a8c5 406 Pfam PF06689 ClpX C4-type zinc finger 4 40 2.6E-10 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 PANTHER PTHR10099:SF2 11 731 6.9E-272 T 23-04-2016 CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 Gene3D G3DSA:3.90.650.10 249 348 6.6E-4 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 12 726 4.5E-278 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 Gene3D G3DSA:3.30.1330.10 411 558 6.3E-45 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 Gene3D G3DSA:3.30.1330.10 43 193 3.6E-42 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 Pfam PF00586 AIR synthase related protein, N-terminal domain 453 555 1.6E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 Pfam PF00586 AIR synthase related protein, N-terminal domain 80 187 2.9E-21 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 SUPERFAMILY SSF55326 399 562 8.11E-43 T 23-04-2016 CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 731 283.534 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 PANTHER PTHR10099 11 731 6.9E-272 T 23-04-2016 CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 SUPERFAMILY SSF56042 570 721 1.5E-18 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 Pfam PF02769 AIR synthase related protein, C-terminal domain 200 349 7.5E-29 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 PIRSF PIRSF001587 1 730 3.6E-286 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 SUPERFAMILY SSF55326 9 193 7.63E-46 T 23-04-2016 CFF04554_RS02760 d3be941f9e7a4e8a9fbbffe4b6864de9 731 SUPERFAMILY SSF56042 198 423 8.37E-51 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS06910 3f22675d96500fc4b63310af51875c72 594 Gene3D G3DSA:3.90.25.10 452 540 2.3E-10 T 23-04-2016 CFF04554_RS06910 3f22675d96500fc4b63310af51875c72 594 Gene3D G3DSA:3.40.50.720 273 451 5.1E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06910 3f22675d96500fc4b63310af51875c72 594 SUPERFAMILY SSF51735 272 530 1.03E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06910 3f22675d96500fc4b63310af51875c72 594 PANTHER PTHR10366:SF256 274 536 6.4E-104 T 23-04-2016 CFF04554_RS06910 3f22675d96500fc4b63310af51875c72 594 PANTHER PTHR10366 274 536 6.4E-104 T 23-04-2016 CFF04554_RS06910 3f22675d96500fc4b63310af51875c72 594 Pfam PF02719 Polysaccharide biosynthesis protein 275 550 5.0E-110 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CFF04554_RS04240 a530cd7f9f8e03ee4798f049984ae599 335 SUPERFAMILY SSF53756 2 333 7.42E-81 T 23-04-2016 CFF04554_RS04240 a530cd7f9f8e03ee4798f049984ae599 335 Gene3D G3DSA:3.40.50.2000 2 166 8.0E-35 T 23-04-2016 CFF04554_RS04240 a530cd7f9f8e03ee4798f049984ae599 335 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 2 333 26.189 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS04240 a530cd7f9f8e03ee4798f049984ae599 335 PANTHER PTHR21015:SF22 1 334 1.7E-62 T 23-04-2016 CFF04554_RS04240 a530cd7f9f8e03ee4798f049984ae599 335 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 169 305 3.8E-37 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS04240 a530cd7f9f8e03ee4798f049984ae599 335 Gene3D G3DSA:3.40.50.2000 167 306 3.7E-41 T 23-04-2016 CFF04554_RS04240 a530cd7f9f8e03ee4798f049984ae599 335 PANTHER PTHR21015 1 334 1.7E-62 T 23-04-2016 CFF04554_RS04240 a530cd7f9f8e03ee4798f049984ae599 335 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 2 141 1.4E-26 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS01945 bca7ca427d410d0d4cc91f690678a2bd 129 Gene3D G3DSA:3.30.230.10 4 129 6.1E-46 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS01945 bca7ca427d410d0d4cc91f690678a2bd 129 PANTHER PTHR21569 5 129 6.5E-58 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01945 bca7ca427d410d0d4cc91f690678a2bd 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01945 bca7ca427d410d0d4cc91f690678a2bd 129 SUPERFAMILY SSF54211 4 129 7.97E-43 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS01945 bca7ca427d410d0d4cc91f690678a2bd 129 Pfam PF00380 Ribosomal protein S9/S16 8 129 7.2E-43 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01945 bca7ca427d410d0d4cc91f690678a2bd 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 28.927 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid CFF04554_RS01700 21efd3382d20327a778d51531a8430bd 377 SUPERFAMILY SSF51419 15 245 7.41E-41 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS01700 21efd3382d20327a778d51531a8430bd 377 PANTHER PTHR11482 1 376 3.2E-150 T 23-04-2016 CFF04554_RS01700 21efd3382d20327a778d51531a8430bd 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 377 8.2E-154 T 23-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 CFF04554_RS01700 21efd3382d20327a778d51531a8430bd 377 SUPERFAMILY SSF50621 212 367 6.91E-28 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS01700 21efd3382d20327a778d51531a8430bd 377 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 248 354 1.1E-7 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS01700 21efd3382d20327a778d51531a8430bd 377 Gene3D G3DSA:3.20.20.10 30 235 8.9E-18 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS01700 21efd3382d20327a778d51531a8430bd 377 Gene3D G3DSA:2.40.37.10 236 356 2.5E-18 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS01700 21efd3382d20327a778d51531a8430bd 377 PIRSF PIRSF038941 1 377 2.8E-155 T 23-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 CFF04554_RS01700 21efd3382d20327a778d51531a8430bd 377 PANTHER PTHR11482:SF38 1 376 3.2E-150 T 23-04-2016 CFF04554_RS02700 d09771468621835a63c2ddc112c1ebfc 131 PIRSF PIRSF003230 1 131 2.2E-35 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CFF04554_RS02700 d09771468621835a63c2ddc112c1ebfc 131 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 4 21 - T 23-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 CFF04554_RS02700 d09771468621835a63c2ddc112c1ebfc 131 PANTHER PTHR31793:SF9 1 127 8.4E-27 T 23-04-2016 CFF04554_RS02700 d09771468621835a63c2ddc112c1ebfc 131 Gene3D G3DSA:3.10.129.10 1 127 6.6E-32 T 23-04-2016 IPR029069 HotDog domain CFF04554_RS02700 d09771468621835a63c2ddc112c1ebfc 131 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 2 90 1.8E-25 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CFF04554_RS02700 d09771468621835a63c2ddc112c1ebfc 131 SUPERFAMILY SSF54637 1 111 2.75E-25 T 23-04-2016 IPR029069 HotDog domain CFF04554_RS02700 d09771468621835a63c2ddc112c1ebfc 131 Pfam PF03061 Thioesterase superfamily 13 89 1.5E-12 T 23-04-2016 IPR006683 Thioesterase domain CFF04554_RS02700 d09771468621835a63c2ddc112c1ebfc 131 PANTHER PTHR31793 1 127 8.4E-27 T 23-04-2016 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 2.1E-56 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 SUPERFAMILY SSF53098 1 153 7.08E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 6.1E-57 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 Gene3D G3DSA:3.30.420.10 1 155 1.1E-52 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 147 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 PANTHER PTHR30194 1 150 3.2E-45 T 23-04-2016 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 41.154 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.6E-20 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 1.6E-20 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.6E-20 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CFF04554_RS09130 eef566e1df271224137cafb01ac0d49c 157 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 1.6E-20 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 SUPERFAMILY SSF52540 5 171 2.37E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 Pfam PF01202 Shikimate kinase 13 170 2.9E-32 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 Gene3D G3DSA:3.40.50.300 3 174 2.4E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 PANTHER PTHR21087 4 173 1.6E-38 T 23-04-2016 CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 PANTHER PTHR21087:SF0 4 173 1.6E-38 T 23-04-2016 CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 PRINTS PR01100 Shikimate kinase family signature 7 22 1.0E-19 T 23-04-2016 CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 PRINTS PR01100 Shikimate kinase family signature 95 112 1.0E-19 T 23-04-2016 CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 PRINTS PR01100 Shikimate kinase family signature 59 67 1.0E-19 T 23-04-2016 CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 PRINTS PR01100 Shikimate kinase family signature 78 87 1.0E-19 T 23-04-2016 CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 PRINTS PR01100 Shikimate kinase family signature 31 44 1.0E-19 T 23-04-2016 CFF04554_RS06845 23b1c821ea9810b089b2888b8664af07 177 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 22.886 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS01740 60e0560f2a2d7099d157743345c6d0aa 247 Pfam PF01925 Sulfite exporter TauE/SafE 9 240 3.9E-38 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CFF04554_RS01740 60e0560f2a2d7099d157743345c6d0aa 247 PANTHER PTHR30269 1 228 1.2E-31 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CFF04554_RS04995 849e44248adc81318351a0d3c7c7b034 512 PANTHER PTHR30332 200 499 7.6E-57 T 23-04-2016 CFF04554_RS04995 849e44248adc81318351a0d3c7c7b034 512 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 200 490 2.8E-84 T 23-04-2016 IPR013358 Pilus biogenesis, MshL CFF04554_RS04995 849e44248adc81318351a0d3c7c7b034 512 Pfam PF07655 Secretin N-terminal domain 114 194 1.3E-11 T 23-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 CFF04554_RS04995 849e44248adc81318351a0d3c7c7b034 512 PRINTS PR00811 Bacterial general secretion pathway protein D signature 234 244 2.8E-15 T 23-04-2016 IPR001775 GspD/PilQ family CFF04554_RS04995 849e44248adc81318351a0d3c7c7b034 512 PRINTS PR00811 Bacterial general secretion pathway protein D signature 312 336 2.8E-15 T 23-04-2016 IPR001775 GspD/PilQ family CFF04554_RS04995 849e44248adc81318351a0d3c7c7b034 512 PRINTS PR00811 Bacterial general secretion pathway protein D signature 478 492 2.8E-15 T 23-04-2016 IPR001775 GspD/PilQ family CFF04554_RS04995 849e44248adc81318351a0d3c7c7b034 512 PRINTS PR00811 Bacterial general secretion pathway protein D signature 455 473 2.8E-15 T 23-04-2016 IPR001775 GspD/PilQ family CFF04554_RS04995 849e44248adc81318351a0d3c7c7b034 512 Pfam PF00263 Bacterial type II and III secretion system protein 317 490 2.6E-45 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 CFF04554_RS04995 849e44248adc81318351a0d3c7c7b034 512 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 436 469 - T 23-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CFF04554_RS03765 decea2d96f01c1adc319c6fb69cdc013 225 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 5 223 1.1E-79 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CFF04554_RS03765 decea2d96f01c1adc319c6fb69cdc013 225 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 223 4.6E-75 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CFF04554_RS03765 decea2d96f01c1adc319c6fb69cdc013 225 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 3 224 36.224 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CFF04554_RS03765 decea2d96f01c1adc319c6fb69cdc013 225 Gene3D G3DSA:3.40.1180.10 5 224 2.8E-81 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CFF04554_RS03765 decea2d96f01c1adc319c6fb69cdc013 225 SUPERFAMILY SSF64005 5 217 6.41E-75 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CFF04554_RS03765 decea2d96f01c1adc319c6fb69cdc013 225 PANTHER PTHR10291 5 225 1.3E-95 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CFF04554_RS02040 dd6b5cb85c6ce079fb8cbcef6af53a3a 392 SUPERFAMILY SSF88697 5 134 1.29E-6 T 23-04-2016 IPR015947 PUA-like domain CFF04554_RS02040 dd6b5cb85c6ce079fb8cbcef6af53a3a 392 Gene3D G3DSA:3.40.50.620 144 356 8.1E-45 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS02040 dd6b5cb85c6ce079fb8cbcef6af53a3a 392 PANTHER PTHR11055:SF19 246 355 1.8E-12 T 23-04-2016 CFF04554_RS02040 dd6b5cb85c6ce079fb8cbcef6af53a3a 392 PANTHER PTHR11055 246 355 1.8E-12 T 23-04-2016 CFF04554_RS02040 dd6b5cb85c6ce079fb8cbcef6af53a3a 392 Gene3D G3DSA:3.10.400.10 6 130 2.4E-5 T 23-04-2016 CFF04554_RS02040 dd6b5cb85c6ce079fb8cbcef6af53a3a 392 Pfam PF01747 ATP-sulfurylase 136 345 1.4E-44 T 23-04-2016 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 CFF04554_RS02040 dd6b5cb85c6ce079fb8cbcef6af53a3a 392 SUPERFAMILY SSF52374 135 351 4.57E-54 T 23-04-2016 CFF04554_RS06900 41bbab7a1207eb2e2ddf904265a30222 203 PIRSF PIRSF000495 1 203 3.9E-71 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CFF04554_RS06900 41bbab7a1207eb2e2ddf904265a30222 203 Gene3D G3DSA:3.40.50.880 2 203 1.8E-78 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS06900 41bbab7a1207eb2e2ddf904265a30222 203 PANTHER PTHR21235:SF1 4 202 1.0E-76 T 23-04-2016 CFF04554_RS06900 41bbab7a1207eb2e2ddf904265a30222 203 PANTHER PTHR21235 4 202 1.0E-76 T 23-04-2016 CFF04554_RS06900 41bbab7a1207eb2e2ddf904265a30222 203 Pfam PF00117 Glutamine amidotransferase class-I 4 200 7.8E-20 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CFF04554_RS06900 41bbab7a1207eb2e2ddf904265a30222 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 203 35.358 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CFF04554_RS06900 41bbab7a1207eb2e2ddf904265a30222 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 202 2.6E-71 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CFF04554_RS06900 41bbab7a1207eb2e2ddf904265a30222 203 SUPERFAMILY SSF52317 2 202 1.28E-57 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 PANTHER PTHR33280 1 65 9.8E-36 T 23-04-2016 CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 Pfam PF01197 Ribosomal protein L31 1 64 5.8E-32 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 PANTHER PTHR33280:SF2 1 65 9.8E-36 T 23-04-2016 CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 29.759 T 23-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 SUPERFAMILY SSF143800 1 65 1.18E-26 T 23-04-2016 CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 5.3E-32 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.0E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 2.0E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01430 da47f73186da02139131d3e1146b7198 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 2.0E-23 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01155 c8cc69a55f6c72003abf5e01160c3095 93 Pfam PF12838 4Fe-4S dicluster domain 8 63 6.6E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS01155 c8cc69a55f6c72003abf5e01160c3095 93 SUPERFAMILY SSF54862 5 69 6.41E-16 T 23-04-2016 CFF04554_RS01155 c8cc69a55f6c72003abf5e01160c3095 93 Gene3D G3DSA:3.30.70.20 5 70 1.4E-14 T 23-04-2016 CFF04554_RS01155 c8cc69a55f6c72003abf5e01160c3095 93 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 SUPERFAMILY SSF56024 494 673 6.73E-61 T 23-04-2016 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 SUPERFAMILY SSF140356 4 102 9.16E-31 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 665 2.0E-232 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 670 34.793 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 SUPERFAMILY SSF143724 109 298 1.75E-52 T 23-04-2016 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 Pfam PF02503 Polyphosphate kinase middle domain 121 313 1.9E-54 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 110 6.2E-29 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 Gene3D G3DSA:3.30.1840.10 107 293 4.9E-54 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 PANTHER PTHR30218 1 692 2.5E-267 T 23-04-2016 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 Gene3D G3DSA:3.30.870.10 493 671 4.2E-64 T 23-04-2016 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 Pfam PF13090 Polyphosphate kinase C-terminal domain 323 664 1.1E-144 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 SUPERFAMILY SSF56024 307 490 3.18E-53 T 23-04-2016 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 PIRSF PIRSF015589 1 684 1.3E-256 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 Gene3D G3DSA:3.30.870.10 307 492 4.3E-70 T 23-04-2016 CFF04554_RS04385 eca8050448a97bccfcd4a7ffca63cfdf 696 PANTHER PTHR30218:SF0 1 692 2.5E-267 T 23-04-2016 CFF04554_RS02715 156bb743aeb8939441be9909843c14ab 157 PANTHER PTHR10545 1 157 1.1E-55 T 23-04-2016 CFF04554_RS02715 156bb743aeb8939441be9909843c14ab 157 Pfam PF00583 Acetyltransferase (GNAT) family 55 135 1.2E-14 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CFF04554_RS02715 156bb743aeb8939441be9909843c14ab 157 SUPERFAMILY SSF55729 1 148 3.55E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS02715 156bb743aeb8939441be9909843c14ab 157 Gene3D G3DSA:3.40.630.30 2 156 7.8E-55 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS01405 a2286986ee6d4f979296d3084e9c7c86 142 PANTHER PTHR30625 12 142 4.9E-27 T 23-04-2016 CFF04554_RS01405 a2286986ee6d4f979296d3084e9c7c86 142 Pfam PF01618 MotA/TolQ/ExbB proton channel family 47 139 6.8E-28 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CFF04554_RS01405 a2286986ee6d4f979296d3084e9c7c86 142 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 6 139 3.1E-55 T 23-04-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 PANTHER PTHR11552 4 545 1.8E-56 T 23-04-2016 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 Pfam PF05199 GMC oxidoreductase 416 534 4.3E-15 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 Pfam PF00732 GMC oxidoreductase 4 293 5.5E-8 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 SUPERFAMILY SSF51905 485 545 6.15E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 SUPERFAMILY SSF51905 2 317 6.15E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 Gene3D G3DSA:3.50.50.60 3 142 1.7E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 Gene3D G3DSA:3.50.50.60 438 439 1.7E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 Gene3D G3DSA:3.50.50.60 476 544 1.7E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 Gene3D G3DSA:3.50.50.60 214 314 1.7E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS09035 4b4cc108b8ce340c3e548d9a0c40c1da 549 PANTHER PTHR11552:SF139 4 545 1.8E-56 T 23-04-2016 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 75 2.9E-15 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 SMART SM00382 144 322 9.3E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 PANTHER PTHR15184:SF8 1 465 0.0 T 23-04-2016 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 SUPERFAMILY SSF52540 79 350 8.62E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 Gene3D G3DSA:1.10.1140.10 348 464 9.4E-59 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 463 55.354 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 PANTHER PTHR15184 1 465 0.0 T 23-04-2016 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 345 3.1E-65 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 SUPERFAMILY SSF50615 2 77 1.7E-20 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 SUPERFAMILY SSF47917 348 464 8.89E-54 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 Gene3D G3DSA:2.40.10.170 2 77 3.9E-25 T 23-04-2016 CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 Gene3D G3DSA:3.40.50.300 78 347 3.2E-110 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07760 a011a64ab3e0b428afb075f6a948449c 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 463 4.7E-255 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS03565 c8f01efa74ef5a1fadcc108cc4687ce0 99 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 17 94 3.6E-31 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 CFF04554_RS03565 c8f01efa74ef5a1fadcc108cc4687ce0 99 PANTHER PTHR33473 9 99 1.5E-25 T 23-04-2016 CFF04554_RS03565 c8f01efa74ef5a1fadcc108cc4687ce0 99 SUPERFAMILY SSF54736 17 98 5.23E-27 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CFF04554_RS03565 c8f01efa74ef5a1fadcc108cc4687ce0 99 Gene3D G3DSA:3.30.1390.10 2 99 5.9E-35 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CFF04554_RS03565 c8f01efa74ef5a1fadcc108cc4687ce0 99 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 94 24.172 T 23-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PANTHER PTHR11922 264 529 1.9E-89 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PANTHER PTHR11922 230 244 1.9E-89 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 185 1.6E-56 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 Gene3D G3DSA:3.40.50.880 1 186 1.2E-60 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 5.1E-12 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 5.1E-12 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 163 176 5.1E-12 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 5.9E-6 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.9E-6 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 205 529 3.0E-104 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 Gene3D G3DSA:1.20.970.10 350 380 9.0E-20 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 Gene3D G3DSA:1.20.970.10 195 261 9.0E-20 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 201 531 29.475 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 SUPERFAMILY SSF52317 1 185 1.25E-51 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.8E-30 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00097 Anthranilate synthase component II signature 163 176 2.8E-30 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.8E-30 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00097 Anthranilate synthase component II signature 120 132 2.8E-30 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00097 Anthranilate synthase component II signature 48 57 2.8E-30 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.8E-30 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 Gene3D G3DSA:3.40.1030.10 271 349 3.0E-70 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 Gene3D G3DSA:3.40.1030.10 388 527 3.0E-70 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 Pfam PF00117 Glutamine amidotransferase class-I 4 184 3.0E-45 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PANTHER PTHR11922:SF5 264 529 1.9E-89 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 PANTHER PTHR11922:SF5 230 244 1.9E-89 T 23-04-2016 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 SUPERFAMILY SSF52418 270 528 1.03E-77 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CFF04554_RS01760 69252a99739249e2009a9182f35b21af 531 Pfam PF00591 Glycosyl transferase family, a/b domain 270 520 2.2E-75 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 1.8E-59 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 64 3.4E-17 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 4.6E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 4.6E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 4.6E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 4.6E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 4.6E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 SUPERFAMILY SSF52374 4 157 1.07E-41 T 23-04-2016 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 Gene3D G3DSA:3.40.50.620 2 157 5.8E-49 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 Pfam PF01467 Cytidylyltransferase-like 6 134 3.2E-20 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 33.53 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 PANTHER PTHR21342 1 158 4.7E-67 T 23-04-2016 CFF04554_RS04465 c5eb1b431e79554a27cc087ceccb25f7 159 PANTHER PTHR21342:SF1 1 158 4.7E-67 T 23-04-2016 CFF04554_RS06485 f8b6b173ad8b010b76ae202ff33845c6 151 Pfam PF06271 RDD family 16 144 3.2E-22 T 23-04-2016 IPR010432 RDD CFF04554_RS00660 ed3e621820ac1f03c3681a33784532a5 650 Pfam PF00361 Proton-conducting membrane transporter 124 404 1.5E-45 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CFF04554_RS00660 ed3e621820ac1f03c3681a33784532a5 650 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 58 102 6.1E-6 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CFF04554_RS00660 ed3e621820ac1f03c3681a33784532a5 650 PANTHER PTHR22773:SF91 1 483 2.2E-123 T 23-04-2016 CFF04554_RS00660 ed3e621820ac1f03c3681a33784532a5 650 PANTHER PTHR22773:SF91 519 621 2.2E-123 T 23-04-2016 CFF04554_RS00660 ed3e621820ac1f03c3681a33784532a5 650 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 8.1E-10 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00660 ed3e621820ac1f03c3681a33784532a5 650 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 8.1E-10 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00660 ed3e621820ac1f03c3681a33784532a5 650 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 160 184 8.1E-10 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00660 ed3e621820ac1f03c3681a33784532a5 650 PANTHER PTHR22773 1 483 2.2E-123 T 23-04-2016 CFF04554_RS00660 ed3e621820ac1f03c3681a33784532a5 650 PANTHER PTHR22773 519 621 2.2E-123 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 SUPERFAMILY SSF53067 1 182 5.34E-61 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 SUPERFAMILY SSF100934 501 609 3.14E-15 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 623 35.714 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PANTHER PTHR19375:SF173 2 626 0.0 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PANTHER PTHR19375 2 626 0.0 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 SUPERFAMILY SSF100920 378 534 4.45E-62 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Gene3D G3DSA:3.30.30.30 53 107 3.5E-20 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Gene3D G3DSA:3.30.420.40 313 354 3.2E-31 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Gene3D G3DSA:3.30.420.40 191 223 3.2E-31 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Pfam PF00012 Hsp70 protein 4 600 4.2E-246 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Gene3D G3DSA:2.60.34.10 384 525 1.1E-71 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Gene3D G3DSA:3.90.640.10 224 307 1.4E-29 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PRINTS PR00301 70kDa heat shock protein signature 196 206 9.6E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PRINTS PR00301 70kDa heat shock protein signature 328 344 9.6E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PRINTS PR00301 70kDa heat shock protein signature 359 379 9.6E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PRINTS PR00301 70kDa heat shock protein signature 137 157 9.6E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.6E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PRINTS PR00301 70kDa heat shock protein signature 54 62 9.6E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PRINTS PR00301 70kDa heat shock protein signature 382 401 9.6E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PRINTS PR00301 70kDa heat shock protein signature 463 479 9.6E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.6E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 6.0E-289 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Gene3D G3DSA:3.30.420.40 4 52 4.2E-64 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Gene3D G3DSA:3.30.420.40 118 190 4.2E-64 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 SUPERFAMILY SSF53067 186 375 1.3E-63 T 23-04-2016 CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 Gene3D G3DSA:1.20.1270.10 526 599 9.7E-27 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CFF04554_RS05385 ed03f2bba2ef01b802bfdff803c7153e 626 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site CFF04554_RS04505 dd69ec6d066468b2326f8354a3d27cae 161 Gene3D G3DSA:3.40.50.360 1 161 1.2E-30 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS04505 dd69ec6d066468b2326f8354a3d27cae 161 PANTHER PTHR19384:SF81 1 115 4.3E-13 T 23-04-2016 CFF04554_RS04505 dd69ec6d066468b2326f8354a3d27cae 161 PANTHER PTHR19384:SF81 135 161 4.3E-13 T 23-04-2016 CFF04554_RS04505 dd69ec6d066468b2326f8354a3d27cae 161 PANTHER PTHR19384 1 115 4.3E-13 T 23-04-2016 CFF04554_RS04505 dd69ec6d066468b2326f8354a3d27cae 161 PANTHER PTHR19384 135 161 4.3E-13 T 23-04-2016 CFF04554_RS04505 dd69ec6d066468b2326f8354a3d27cae 161 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CFF04554_RS04505 dd69ec6d066468b2326f8354a3d27cae 161 Pfam PF00258 Flavodoxin 6 98 7.1E-10 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CFF04554_RS04505 dd69ec6d066468b2326f8354a3d27cae 161 PIRSF PIRSF038996 1 161 2.6E-51 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 CFF04554_RS04505 dd69ec6d066468b2326f8354a3d27cae 161 SUPERFAMILY SSF52218 1 160 7.83E-29 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:1.20.1580.10 92 130 1.9E-53 T 23-04-2016 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:1.20.1580.10 256 289 1.9E-53 T 23-04-2016 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:1.20.1580.10 400 474 1.9E-53 T 23-04-2016 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 PANTHER PTHR32282:SF2 1 937 0.0 T 23-04-2016 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 SUPERFAMILY SSF52540 5 205 6.29E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 SUPERFAMILY SSF52540 443 566 6.29E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 918 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 PANTHER PTHR32282 1 937 0.0 T 23-04-2016 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:3.30.1490.20 132 154 1.0E-14 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:3.30.1490.20 201 243 1.0E-14 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 ProSitePatterns PS00211 ABC transporters family signature. 823 837 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:1.10.8.280 293 399 9.3E-17 T 23-04-2016 CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 SUPERFAMILY SSF52540 607 906 2.33E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:3.40.50.300 601 661 1.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:3.40.50.300 814 925 1.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:3.40.50.300 5 52 3.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:3.40.50.300 475 588 3.0E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01730 d333306f171f20b76e0386e3c50b9a57 943 Gene3D G3DSA:1.20.1580.10 687 813 1.6E-53 T 23-04-2016 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 PANTHER PTHR23115 3 373 8.6E-272 T 23-04-2016 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 PANTHER PTHR23115 401 596 8.6E-272 T 23-04-2016 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 PRINTS PR00315 GTP-binding elongation factor signature 73 83 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 PRINTS PR00315 GTP-binding elongation factor signature 89 100 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 PRINTS PR00315 GTP-binding elongation factor signature 125 134 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 PRINTS PR00315 GTP-binding elongation factor signature 49 57 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 PANTHER PTHR23115:SF97 3 373 8.6E-272 T 23-04-2016 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 PANTHER PTHR23115:SF97 401 596 8.6E-272 T 23-04-2016 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 Pfam PF03144 Elongation factor Tu domain 2 204 275 3.2E-12 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 Gene3D G3DSA:3.30.70.870 292 369 4.0E-24 T 23-04-2016 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 Hamap MF_00071 Elongation factor 4 [lepA]. 1 596 282.708 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 Pfam PF06421 GTP-binding protein LepA C-terminus 489 594 1.5E-46 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 Gene3D G3DSA:3.40.50.300 2 192 3.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 Gene3D G3DSA:3.30.70.240 401 488 1.1E-20 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 SMART SM00838 398 486 0.0041 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 Pfam PF00009 Elongation factor Tu GTP binding domain 3 180 5.5E-54 T 23-04-2016 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 SUPERFAMILY SSF54980 399 494 4.8E-24 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 175 2.6E-21 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 SUPERFAMILY SSF54980 292 370 1.12E-17 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 SUPERFAMILY SSF52540 2 229 3.19E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 TIGRFAM TIGR01393 lepA: elongation factor 4 3 596 1.3E-294 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 Pfam PF00679 Elongation factor G C-terminus 399 485 2.0E-24 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CFF04554_RS07510 5ccbdd85816f8035d774efcd70acf5e3 596 Gene3D G3DSA:2.40.30.10 193 288 1.4E-22 T 23-04-2016 CFF04554_RS09360 69668a533dc3248fd2a1ca40053b9d74 136 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 3 62 3.7E-5 T 23-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component CFF04554_RS02730 f38b6e5f77fc33e8b187746ae4fa830b 44 Pfam PF00468 Ribosomal protein L34 1 44 1.8E-22 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS02730 f38b6e5f77fc33e8b187746ae4fa830b 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.801 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS02730 f38b6e5f77fc33e8b187746ae4fa830b 44 PANTHER PTHR14503 1 44 1.2E-17 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS02730 f38b6e5f77fc33e8b187746ae4fa830b 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS02730 f38b6e5f77fc33e8b187746ae4fa830b 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 32 4.0E-10 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS02730 f38b6e5f77fc33e8b187746ae4fa830b 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.7E-24 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS08675 24c116116e0367cc3e721f7db25f5ce3 167 PANTHER PTHR14119 2 167 2.0E-35 T 23-04-2016 CFF04554_RS08675 24c116116e0367cc3e721f7db25f5ce3 167 PANTHER PTHR14119:SF3 2 167 2.0E-35 T 23-04-2016 CFF04554_RS08675 24c116116e0367cc3e721f7db25f5ce3 167 Pfam PF00857 Isochorismatase family 5 140 3.0E-19 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CFF04554_RS08675 24c116116e0367cc3e721f7db25f5ce3 167 SUPERFAMILY SSF52499 7 167 2.35E-30 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CFF04554_RS08675 24c116116e0367cc3e721f7db25f5ce3 167 Gene3D G3DSA:3.40.50.850 2 167 1.0E-39 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 240 1.4E-15 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 Hamap MF_00303 Trigger factor [tig]. 1 432 18.762 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 SUPERFAMILY SSF109998 251 433 3.24E-31 T 23-04-2016 IPR027304 Trigger factor/SurA domain CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 TIGRFAM TIGR00115 tig: trigger factor 14 424 4.7E-106 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 5.5E-26 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 SUPERFAMILY SSF54534 102 244 1.43E-32 T 23-04-2016 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 Gene3D G3DSA:3.30.70.1050 1 119 1.4E-23 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 PIRSF PIRSF003095 1 435 9.6E-99 T 23-04-2016 IPR005215 Trigger factor GO:0015031 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 267 425 1.8E-29 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 Gene3D G3DSA:1.10.3120.10 207 398 8.5E-40 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 PANTHER PTHR30560 18 433 4.4E-64 T 23-04-2016 CFF04554_RS08545 35e94b1b66cc90ac46bfff96483817dd 435 SUPERFAMILY SSF102735 1 131 4.58E-25 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 SUPERFAMILY SSF50447 447 541 6.36E-15 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 2 824 4.1E-291 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 Pfam PF02272 DHHA1 domain 771 837 2.9E-14 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 SUPERFAMILY SSF101353 240 453 2.75E-60 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 PANTHER PTHR11777 2 845 0.0 T 23-04-2016 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 641 683 1.3E-14 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 Pfam PF01411 tRNA synthetases class II (A) 2 542 2.5E-208 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 SMART SM00863 641 683 9.8E-17 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 Gene3D G3DSA:3.30.930.10 2 235 1.5E-109 T 23-04-2016 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 845 167.329 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 SUPERFAMILY SSF55681 2 239 1.17E-99 T 23-04-2016 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 220 233 1.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 268 284 1.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 193 204 1.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 1.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 305 1.4E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 SUPERFAMILY SSF55186 546 692 1.22E-45 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CFF04554_RS05100 10f727a2080d34e7ee8582e609335bf9 845 PANTHER PTHR11777:SF9 2 845 0.0 T 23-04-2016 CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.5E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 PIRSF PIRSF000094 1 258 2.5E-113 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.6E-83 T 23-04-2016 CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 PANTHER PTHR24322:SF317 157 189 3.5E-59 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 PANTHER PTHR24322:SF317 10 141 3.5E-59 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 Gene3D G3DSA:3.40.50.720 5 199 3.1E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 SUPERFAMILY SSF51735 4 254 1.89E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 PANTHER PTHR24322 157 189 3.5E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS07265 9c89013480e42938128bb2f8517e74ff 274 PANTHER PTHR24322 10 141 3.5E-59 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 365 446 1.8E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 6.4E-20 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 6.4E-20 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 217 6.4E-20 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 6.4E-20 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 PANTHER PTHR22573 3 454 8.1E-117 T 23-04-2016 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 SUPERFAMILY SSF53738 152 251 3.61E-22 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 Gene3D G3DSA:3.40.120.10 4 137 7.2E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 SUPERFAMILY SSF55957 359 451 8.76E-21 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 Gene3D G3DSA:3.40.120.10 252 359 6.8E-28 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 SUPERFAMILY SSF53738 257 352 7.46E-20 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 SUPERFAMILY SSF53738 2 126 1.55E-31 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 251 9.4E-18 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 Gene3D G3DSA:3.30.310.50 361 453 4.1E-27 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 PANTHER PTHR22573:SF28 3 454 8.1E-117 T 23-04-2016 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 361 2.4E-17 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 132 2.4E-27 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS00510 149fe97c1eacc41007d9b8d5fdce2f76 455 Gene3D G3DSA:3.40.120.10 172 247 2.1E-22 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS03545 fe5c95794499023596a41c68cbd864aa 146 PANTHER PTHR30435 5 124 3.4E-23 T 23-04-2016 CFF04554_RS03545 fe5c95794499023596a41c68cbd864aa 146 PIRSF PIRSF002889 3 143 1.8E-33 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CFF04554_RS03545 fe5c95794499023596a41c68cbd864aa 146 PANTHER PTHR30435:SF12 5 124 3.4E-23 T 23-04-2016 CFF04554_RS03545 fe5c95794499023596a41c68cbd864aa 146 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 17 37 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CFF04554_RS03545 fe5c95794499023596a41c68cbd864aa 146 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 9 140 9.2E-30 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CFF04554_RS03915 36dd3fa95548375a0067cfe9f5b0dfa1 210 PANTHER PTHR30614:SF18 1 210 7.2E-90 T 23-04-2016 CFF04554_RS03915 36dd3fa95548375a0067cfe9f5b0dfa1 210 Gene3D G3DSA:1.10.3720.10 5 207 1.8E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS03915 36dd3fa95548375a0067cfe9f5b0dfa1 210 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 101 2.2E-25 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CFF04554_RS03915 36dd3fa95548375a0067cfe9f5b0dfa1 210 PANTHER PTHR30614 1 210 7.2E-90 T 23-04-2016 CFF04554_RS03915 36dd3fa95548375a0067cfe9f5b0dfa1 210 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 20 203 7.6E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS03915 36dd3fa95548375a0067cfe9f5b0dfa1 210 SUPERFAMILY SSF161098 4 195 8.63E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS02865 bdc9876308b6058fa086bc70df6c0503 396 Pfam PF02687 FtsX-like permease family 264 388 5.4E-21 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CFF04554_RS02865 bdc9876308b6058fa086bc70df6c0503 396 PANTHER PTHR30489 1 396 1.2E-50 T 23-04-2016 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 Gene3D G3DSA:3.10.20.80 4 80 1.2E-34 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 170 4.0E-30 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 PANTHER PTHR10938 3 171 3.1E-57 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 SUPERFAMILY SSF54364 7 80 7.06E-29 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 SUPERFAMILY SSF55200 84 171 1.22E-27 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 172 28.18 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 171 2.3E-64 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 78 1.5E-30 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 Gene3D G3DSA:3.30.110.10 81 171 1.6E-29 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CFF04554_RS08585 e60d5193db2bdb069528805cb8d87c38 172 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CFF04554_RS03025 1d5f4098481566993630adbe6f52c235 453 SUPERFAMILY SSF75304 48 451 4.71E-134 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CFF04554_RS03025 1d5f4098481566993630adbe6f52c235 453 Gene3D G3DSA:3.90.1300.10 47 451 4.9E-146 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CFF04554_RS03025 1d5f4098481566993630adbe6f52c235 453 PANTHER PTHR11895:SF7 49 453 1.0E-170 T 23-04-2016 CFF04554_RS03025 1d5f4098481566993630adbe6f52c235 453 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 3 449 3.4E-163 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CFF04554_RS03025 1d5f4098481566993630adbe6f52c235 453 ProSitePatterns PS00571 Amidases signature. 129 160 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CFF04554_RS03025 1d5f4098481566993630adbe6f52c235 453 Pfam PF01425 Amidase 35 440 1.5E-137 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CFF04554_RS03025 1d5f4098481566993630adbe6f52c235 453 PANTHER PTHR11895 49 453 1.0E-170 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CFF04554_RS03025 1d5f4098481566993630adbe6f52c235 453 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 4 451 81.949 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CFF04554_RS09400 31863f62ceec7580d5309f42be1fbdc0 85 SUPERFAMILY SSF51735 2 84 1.34E-8 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS09400 31863f62ceec7580d5309f42be1fbdc0 85 Gene3D G3DSA:3.40.50.720 1 84 7.4E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS09400 31863f62ceec7580d5309f42be1fbdc0 85 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 2 84 9.9E-8 T 23-04-2016 CFF04554_RS03760 58fa66692015228d3bb60d81390a735a 241 PANTHER PTHR30487 5 240 3.0E-37 T 23-04-2016 CFF04554_RS03760 58fa66692015228d3bb60d81390a735a 241 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 6 66 1.3E-22 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CFF04554_RS03760 58fa66692015228d3bb60d81390a735a 241 Pfam PF01478 Type IV leader peptidase family 80 197 4.7E-6 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CFF04554_RS03760 58fa66692015228d3bb60d81390a735a 241 PANTHER PTHR30487:SF0 5 240 3.0E-37 T 23-04-2016 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.4E-21 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.4E-21 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.4E-21 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 PANTHER PTHR11880 1 83 6.3E-47 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 SUPERFAMILY SSF54570 3 84 4.45E-35 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 5.5E-44 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 Gene3D G3DSA:3.30.860.10 1 89 5.2E-39 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.17 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 PIRSF PIRSF002144 1 93 2.0E-31 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00185 14311cb1460f44cada5be1282cac73ec 93 Pfam PF00203 Ribosomal protein S19 3 83 6.3E-36 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS04290 23180089c235912eb89afdc1f6500cfc 526 SUPERFAMILY SSF50182 308 388 7.19E-7 T 23-04-2016 IPR010920 LSM domain CFF04554_RS04290 23180089c235912eb89afdc1f6500cfc 526 Gene3D G3DSA:2.30.30.60 324 387 1.1E-6 T 23-04-2016 CFF04554_RS04290 23180089c235912eb89afdc1f6500cfc 526 PANTHER PTHR30566:SF14 21 421 2.5E-16 T 23-04-2016 CFF04554_RS04290 23180089c235912eb89afdc1f6500cfc 526 Pfam PF00924 Mechanosensitive ion channel 264 487 1.0E-35 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CFF04554_RS04290 23180089c235912eb89afdc1f6500cfc 526 PANTHER PTHR30566 21 421 2.5E-16 T 23-04-2016 CFF04554_RS04290 23180089c235912eb89afdc1f6500cfc 526 SUPERFAMILY SSF82689 396 508 1.44E-6 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 Gene3D G3DSA:1.10.10.10 1 83 3.3E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 PANTHER PTHR30126:SF11 1 269 1.1E-53 T 23-04-2016 CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 Gene3D G3DSA:3.40.190.10 90 183 8.5E-14 T 23-04-2016 CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 Gene3D G3DSA:3.40.190.10 184 241 3.7E-7 T 23-04-2016 CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 SUPERFAMILY SSF53850 90 278 4.96E-16 T 23-04-2016 CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 SUPERFAMILY SSF46785 1 76 7.26E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 PANTHER PTHR30126 1 269 1.1E-53 T 23-04-2016 CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 Pfam PF03466 LysR substrate binding domain 90 265 9.7E-19 T 23-04-2016 IPR005119 LysR, substrate-binding CFF04554_RS07300 6bb09c1f9baafa602ca5c0aab32a0040 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.4E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CFF04554_RS01050 b7b455c46a9d35f033d22f5853b0e47b 210 SUPERFAMILY SSF48150 5 189 1.52E-79 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CFF04554_RS01050 b7b455c46a9d35f033d22f5853b0e47b 210 PANTHER PTHR30037:SF4 3 199 6.4E-106 T 23-04-2016 CFF04554_RS01050 b7b455c46a9d35f033d22f5853b0e47b 210 PANTHER PTHR30037 3 199 6.4E-106 T 23-04-2016 CFF04554_RS01050 b7b455c46a9d35f033d22f5853b0e47b 210 Gene3D G3DSA:1.10.340.30 5 185 1.0E-80 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CFF04554_RS01050 b7b455c46a9d35f033d22f5853b0e47b 210 Pfam PF03352 Methyladenine glycosylase 9 184 1.9E-78 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CFF04554_RS04070 3d662e8d83f3c6417761a51933c25c77 478 SUPERFAMILY SSF53623 156 352 1.83E-26 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS04070 3d662e8d83f3c6417761a51933c25c77 478 Gene3D G3DSA:3.90.190.20 356 470 1.8E-8 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS04070 3d662e8d83f3c6417761a51933c25c77 478 Pfam PF08245 Mur ligase middle domain 162 335 5.0E-19 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS04070 3d662e8d83f3c6417761a51933c25c77 478 SUPERFAMILY SSF53244 356 470 2.75E-14 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS04070 3d662e8d83f3c6417761a51933c25c77 478 Gene3D G3DSA:3.40.1190.10 154 350 8.3E-30 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS04070 3d662e8d83f3c6417761a51933c25c77 478 PANTHER PTHR23135 147 470 3.7E-30 T 23-04-2016 CFF04554_RS04070 3d662e8d83f3c6417761a51933c25c77 478 PANTHER PTHR23135:SF3 147 470 3.7E-30 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS08350 e99deef39908ce4cfd4b88313258247b 316 PANTHER PTHR30465:SF24 4 315 6.1E-85 T 23-04-2016 CFF04554_RS08350 e99deef39908ce4cfd4b88313258247b 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 315 1.9E-32 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS08350 e99deef39908ce4cfd4b88313258247b 316 Gene3D G3DSA:1.10.3720.10 97 314 3.6E-14 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS08350 e99deef39908ce4cfd4b88313258247b 316 PANTHER PTHR30465 4 315 6.1E-85 T 23-04-2016 CFF04554_RS08350 e99deef39908ce4cfd4b88313258247b 316 SUPERFAMILY SSF161098 96 303 1.8E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS05845 96485ab5089a932a9b3b37f7a32fc595 128 Gene3D G3DSA:3.30.70.60 1 98 1.3E-32 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CFF04554_RS05845 96485ab5089a932a9b3b37f7a32fc595 128 SUPERFAMILY SSF54995 1 98 3.14E-31 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS05845 96485ab5089a932a9b3b37f7a32fc595 128 PANTHER PTHR21011 1 118 1.5E-26 T 23-04-2016 CFF04554_RS05845 96485ab5089a932a9b3b37f7a32fc595 128 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 2.3E-27 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS05845 96485ab5089a932a9b3b37f7a32fc595 128 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.783 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS05845 96485ab5089a932a9b3b37f7a32fc595 128 Pfam PF01250 Ribosomal protein S6 3 92 3.9E-28 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS02330 a40d256a3539932ce6550e787317e716 134 SUPERFAMILY SSF55486 21 130 4.89E-33 T 23-04-2016 CFF04554_RS02330 a40d256a3539932ce6550e787317e716 134 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 94 104 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site CFF04554_RS02330 a40d256a3539932ce6550e787317e716 134 Gene3D G3DSA:3.40.390.30 3 131 7.8E-39 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CFF04554_RS02330 a40d256a3539932ce6550e787317e716 134 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 23 122 2.2E-28 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CFF04554_RS02330 a40d256a3539932ce6550e787317e716 134 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 126 19.583 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CFF04554_RS02330 a40d256a3539932ce6550e787317e716 134 PANTHER PTHR22881 12 125 2.8E-24 T 23-04-2016 CFF04554_RS02330 a40d256a3539932ce6550e787317e716 134 Pfam PF02130 Uncharacterized protein family UPF0054 11 121 1.6E-31 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CFF04554_RS01960 2df48c9f64852f76c2009070d04f0bac 216 SUPERFAMILY SSF56784 4 208 6.4E-48 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS01960 2df48c9f64852f76c2009070d04f0bac 216 PANTHER PTHR18901 5 205 1.1E-38 T 23-04-2016 CFF04554_RS01960 2df48c9f64852f76c2009070d04f0bac 216 Gene3D G3DSA:3.40.50.1000 74 208 3.3E-34 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS01960 2df48c9f64852f76c2009070d04f0bac 216 Gene3D G3DSA:1.10.150.240 18 73 3.3E-13 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CFF04554_RS01960 2df48c9f64852f76c2009070d04f0bac 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 89 175 5.0E-7 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CFF04554_RS01960 2df48c9f64852f76c2009070d04f0bac 216 PANTHER PTHR18901:SF14 5 205 1.1E-38 T 23-04-2016 CFF04554_RS01960 2df48c9f64852f76c2009070d04f0bac 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 182 2.1E-39 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS06985 d0caf84da3fa3a8945595f34a97394e4 273 SUPERFAMILY SSF52374 1 273 4.44E-93 T 23-04-2016 CFF04554_RS06985 d0caf84da3fa3a8945595f34a97394e4 273 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 273 6.0E-96 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CFF04554_RS06985 d0caf84da3fa3a8945595f34a97394e4 273 Hamap MF_00158 Pantothenate synthetase [panC]. 2 273 35.733 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CFF04554_RS06985 d0caf84da3fa3a8945595f34a97394e4 273 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 58 3.4E-7 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CFF04554_RS06985 d0caf84da3fa3a8945595f34a97394e4 273 Pfam PF02569 Pantoate-beta-alanine ligase 3 271 1.2E-90 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CFF04554_RS06985 d0caf84da3fa3a8945595f34a97394e4 273 PANTHER PTHR21299:SF1 1 273 5.3E-112 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CFF04554_RS06985 d0caf84da3fa3a8945595f34a97394e4 273 Gene3D G3DSA:3.30.1300.10 172 273 3.1E-26 T 23-04-2016 CFF04554_RS06985 d0caf84da3fa3a8945595f34a97394e4 273 Gene3D G3DSA:3.40.50.620 1 170 6.6E-65 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06985 d0caf84da3fa3a8945595f34a97394e4 273 PANTHER PTHR21299 1 273 5.3E-112 T 23-04-2016 CFF04554_RS06260 07b8b86e7232115d444cb2fd65bb304a 238 SUPERFAMILY SSF53633 3 231 1.15E-63 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS06260 07b8b86e7232115d444cb2fd65bb304a 238 PIRSF PIRSF005650 1 238 4.5E-83 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CFF04554_RS06260 07b8b86e7232115d444cb2fd65bb304a 238 PANTHER PTHR21499 5 228 1.6E-92 T 23-04-2016 CFF04554_RS06260 07b8b86e7232115d444cb2fd65bb304a 238 PANTHER PTHR21499:SF23 5 228 1.6E-92 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CFF04554_RS06260 07b8b86e7232115d444cb2fd65bb304a 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 237 40.855 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CFF04554_RS06260 07b8b86e7232115d444cb2fd65bb304a 238 Gene3D G3DSA:3.40.1160.10 3 230 5.2E-72 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS06260 07b8b86e7232115d444cb2fd65bb304a 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 231 5.8E-92 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CFF04554_RS06260 07b8b86e7232115d444cb2fd65bb304a 238 Pfam PF00696 Amino acid kinase family 5 215 2.0E-31 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 301 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 SMART SM00436 104 192 5.4E-46 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Gene3D G3DSA:3.40.50.140 2 134 1.2E-45 T 23-04-2016 IPR006171 Toprim domain CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 SUPERFAMILY SSF57783 569 609 2.55E-11 T 23-04-2016 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Pfam PF01131 DNA topoisomerase 128 541 2.8E-125 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 SMART SM00437 242 504 1.1E-101 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 PANTHER PTHR11390:SF27 1 685 4.4E-295 T 23-04-2016 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 3.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 292 301 3.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 3.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 3.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 467 481 3.7E-33 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Pfam PF01751 Toprim domain 3 113 1.7E-28 T 23-04-2016 IPR006171 Toprim domain CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Gene3D G3DSA:2.70.20.10 317 450 1.2E-29 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Gene3D G3DSA:2.70.20.10 184 314 2.0E-27 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 SUPERFAMILY SSF57783 617 652 3.91E-8 T 23-04-2016 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 SMART SM00493 2 103 1.2E-29 T 23-04-2016 IPR006171 Toprim domain CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Gene3D G3DSA:3.30.65.10 656 683 4.5E-4 T 23-04-2016 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Gene3D G3DSA:3.30.65.10 574 610 1.9E-13 T 23-04-2016 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Gene3D G3DSA:3.30.65.10 618 650 2.0E-7 T 23-04-2016 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 SUPERFAMILY SSF56712 1 581 4.05E-184 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 604 6.5E-246 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Gene3D G3DSA:1.10.460.10 135 182 1.2E-56 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Gene3D G3DSA:1.10.460.10 451 573 1.2E-56 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 620 656 4.6E-14 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 691 1.9E-5 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 569 606 5.2E-16 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 Hamap MF_00952 DNA topoisomerase 1 [topA]. 2 638 54.07 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CFF04554_RS00875 27525a62e477ff315f1f432e97a4b1d5 694 PANTHER PTHR11390 1 685 4.4E-295 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 2.0E-30 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 2.0E-30 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 2.0E-30 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 2.0E-30 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 Gene3D G3DSA:1.20.200.10 140 400 2.2E-91 T 23-04-2016 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 Gene3D G3DSA:1.10.275.10 2 139 3.7E-56 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 Pfam PF10415 Fumarase C C-terminus 408 460 4.5E-23 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 PANTHER PTHR11444:SF25 4 462 1.1E-259 T 23-04-2016 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 Gene3D G3DSA:1.10.40.30 408 468 9.5E-25 T 23-04-2016 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 1.0E-6 T 23-04-2016 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 1.0E-6 T 23-04-2016 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 1.0E-6 T 23-04-2016 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 4 465 3.9E-242 T 23-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 Pfam PF00206 Lyase 11 342 3.5E-106 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 SUPERFAMILY SSF48557 3 460 3.53E-148 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CFF04554_RS08305 e6150200d741ecebafb7c57d3530bbff 474 PANTHER PTHR11444 4 462 1.1E-259 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS03075 e3d72505a3fde12a3a6d6ae36661be6d 305 PANTHER PTHR30024:SF16 29 305 3.1E-43 T 23-04-2016 CFF04554_RS03075 e3d72505a3fde12a3a6d6ae36661be6d 305 Pfam PF13379 NMT1-like family 29 242 1.6E-27 T 23-04-2016 CFF04554_RS03075 e3d72505a3fde12a3a6d6ae36661be6d 305 Gene3D G3DSA:3.40.190.10 104 202 5.7E-17 T 23-04-2016 CFF04554_RS03075 e3d72505a3fde12a3a6d6ae36661be6d 305 PANTHER PTHR30024 29 305 3.1E-43 T 23-04-2016 CFF04554_RS03075 e3d72505a3fde12a3a6d6ae36661be6d 305 SUPERFAMILY SSF53850 28 242 1.17E-38 T 23-04-2016 CFF04554_RS03075 e3d72505a3fde12a3a6d6ae36661be6d 305 SMART SM00062 25 241 9.2E-4 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS08255 41fb67cb290c5fd0a681f7a4bcb5094a 331 Gene3D G3DSA:3.40.50.720 5 240 3.4E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS08255 41fb67cb290c5fd0a681f7a4bcb5094a 331 PANTHER PTHR10366 6 272 1.3E-115 T 23-04-2016 CFF04554_RS08255 41fb67cb290c5fd0a681f7a4bcb5094a 331 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 5.6E-170 T 23-04-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 CFF04554_RS08255 41fb67cb290c5fd0a681f7a4bcb5094a 331 Pfam PF02719 Polysaccharide biosynthesis protein 7 280 1.3E-105 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CFF04554_RS08255 41fb67cb290c5fd0a681f7a4bcb5094a 331 PANTHER PTHR10366:SF360 6 272 1.3E-115 T 23-04-2016 CFF04554_RS08255 41fb67cb290c5fd0a681f7a4bcb5094a 331 SUPERFAMILY SSF51735 1 270 3.23E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 Gene3D G3DSA:2.170.220.10 114 224 1.1E-41 T 23-04-2016 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 4 504 5.5E-159 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 SUPERFAMILY SSF47323 347 503 2.62E-30 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 518 631 4.1E-37 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 SUPERFAMILY SSF52374 2 346 1.37E-109 T 23-04-2016 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 SUPERFAMILY SSF50249 528 630 1.3E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 Gene3D G3DSA:1.10.730.10 336 503 1.5E-35 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 Gene3D G3DSA:3.40.50.620 3 111 1.4E-73 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 Gene3D G3DSA:3.40.50.620 225 334 1.4E-73 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 Gene3D G3DSA:2.40.50.140 526 631 2.4E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 PANTHER PTHR11946:SF1 4 589 1.0E-244 T 23-04-2016 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 Pfam PF01588 Putative tRNA binding domain 538 628 2.0E-24 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 PRINTS PR01041 Methionyl-tRNA synthetase signature 85 96 2.3E-36 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 PRINTS PR01041 Methionyl-tRNA synthetase signature 5 18 2.3E-36 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 PRINTS PR01041 Methionyl-tRNA synthetase signature 346 357 2.3E-36 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 PRINTS PR01041 Methionyl-tRNA synthetase signature 223 234 2.3E-36 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 PRINTS PR01041 Methionyl-tRNA synthetase signature 254 269 2.3E-36 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 PRINTS PR01041 Methionyl-tRNA synthetase signature 37 51 2.3E-36 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 7 130 1.0E-13 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 Pfam PF09334 tRNA synthetases class I (M) 141 358 1.2E-67 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 503 46.609 T 23-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CFF04554_RS03995 6ae37a0521983866f76f65b56dc7d03d 632 PANTHER PTHR11946 4 589 1.0E-244 T 23-04-2016 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 SUPERFAMILY SSF50249 131 187 1.93E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 Gene3D G3DSA:2.30.30.30 4 64 3.2E-29 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 SMART SM00841 131 186 2.2E-27 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 Gene3D G3DSA:2.40.50.140 131 187 2.8E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 SUPERFAMILY SSF50104 2 65 1.2E-21 T 23-04-2016 IPR008991 Translation protein SH3-like domain CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 Gene3D G3DSA:2.40.50.140 67 129 6.7E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 PIRSF PIRSF005901 2 188 2.6E-64 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 SMART SM01185 69 123 3.7E-27 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 PANTHER PTHR30053 1 188 3.2E-79 T 23-04-2016 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.6E-20 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 46.72 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 1.8E-25 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 3.3E-22 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 SUPERFAMILY SSF50249 69 128 7.71E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06420 9e58943c6f73dd77ea791d32b0f504d4 189 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.3E-74 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CFF04554_RS01710 57dde5861e040f47011ab2298eb1795e 317 PANTHER PTHR10256 26 302 3.9E-73 T 23-04-2016 CFF04554_RS01710 57dde5861e040f47011ab2298eb1795e 317 SUPERFAMILY SSF55326 22 136 2.69E-31 T 23-04-2016 CFF04554_RS01710 57dde5861e040f47011ab2298eb1795e 317 Pfam PF02769 AIR synthase related protein, C-terminal domain 146 314 6.3E-23 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS01710 57dde5861e040f47011ab2298eb1795e 317 Gene3D G3DSA:3.90.650.10 150 314 4.9E-17 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS01710 57dde5861e040f47011ab2298eb1795e 317 TIGRFAM TIGR00476 selD: selenide, water dikinase 13 284 2.0E-90 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CFF04554_RS01710 57dde5861e040f47011ab2298eb1795e 317 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 132 4.6E-15 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS01710 57dde5861e040f47011ab2298eb1795e 317 Gene3D G3DSA:3.30.1330.10 18 136 3.1E-20 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS01710 57dde5861e040f47011ab2298eb1795e 317 PIRSF PIRSF036407 2 317 7.7E-97 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CFF04554_RS01710 57dde5861e040f47011ab2298eb1795e 317 SUPERFAMILY SSF56042 138 313 2.09E-39 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS03860 a9acf84140c58def7609b41d000c58f1 190 Pfam PF04264 YceI-like domain 48 157 2.5E-7 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CFF04554_RS03860 a9acf84140c58def7609b41d000c58f1 190 Gene3D G3DSA:2.40.128.110 46 153 4.3E-6 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CFF04554_RS01765 473ad5ef291cd16cc458242825fc1995 201 Gene3D G3DSA:3.20.20.70 2 191 7.6E-50 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS01765 473ad5ef291cd16cc458242825fc1995 201 SUPERFAMILY SSF51366 1 195 1.19E-40 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CFF04554_RS01765 473ad5ef291cd16cc458242825fc1995 201 PANTHER PTHR22854 1 195 2.9E-33 T 23-04-2016 CFF04554_RS01765 473ad5ef291cd16cc458242825fc1995 201 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 198 26.917 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 CFF04554_RS01765 473ad5ef291cd16cc458242825fc1995 201 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 192 1.5E-31 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 CFF04554_RS01765 473ad5ef291cd16cc458242825fc1995 201 PANTHER PTHR22854:SF6 1 195 2.9E-33 T 23-04-2016 CFF04554_RS01020 bf51e9e64d5de7fa33eb2f7852a4d0fa 253 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 25 253 4.6E-48 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS01020 bf51e9e64d5de7fa33eb2f7852a4d0fa 253 Gene3D G3DSA:3.30.465.10 55 182 1.2E-25 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CFF04554_RS01020 bf51e9e64d5de7fa33eb2f7852a4d0fa 253 SUPERFAMILY SSF56176 27 162 7.3E-18 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CFF04554_RS01020 bf51e9e64d5de7fa33eb2f7852a4d0fa 253 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 165 253 1.5E-21 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS01020 bf51e9e64d5de7fa33eb2f7852a4d0fa 253 PANTHER PTHR21071 16 253 4.0E-45 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS01020 bf51e9e64d5de7fa33eb2f7852a4d0fa 253 Gene3D G3DSA:3.90.78.10 183 253 1.6E-25 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS01020 bf51e9e64d5de7fa33eb2f7852a4d0fa 253 SUPERFAMILY SSF56194 165 253 1.15E-26 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS01020 bf51e9e64d5de7fa33eb2f7852a4d0fa 253 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 253 43.984 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS03345 583762813e2493686568e1dfb898483c 121 SUPERFAMILY SSF55166 6 113 2.88E-21 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CFF04554_RS03345 583762813e2493686568e1dfb898483c 121 Pfam PF08291 Peptidase M15 11 108 4.6E-17 T 23-04-2016 IPR013230 Peptidase M15A, C-terminal MetaCyc: PWY-6470 CFF04554_RS03345 583762813e2493686568e1dfb898483c 121 Gene3D G3DSA:3.30.1380.10 6 112 9.6E-23 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CFF04554_RS02615 331665ea59abf9245e9c379f2fef5543 220 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS02615 331665ea59abf9245e9c379f2fef5543 220 SMART SM00382 28 212 5.1E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02615 331665ea59abf9245e9c379f2fef5543 220 SUPERFAMILY SSF52540 3 216 8.91E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02615 331665ea59abf9245e9c379f2fef5543 220 Pfam PF00005 ABC transporter 19 164 9.3E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS02615 331665ea59abf9245e9c379f2fef5543 220 PANTHER PTHR24220:SF433 5 213 4.2E-95 T 23-04-2016 CFF04554_RS02615 331665ea59abf9245e9c379f2fef5543 220 Gene3D G3DSA:3.40.50.300 3 213 3.4E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02615 331665ea59abf9245e9c379f2fef5543 220 PANTHER PTHR24220 5 213 4.2E-95 T 23-04-2016 CFF04554_RS07605 709066d203a9191b2276d84e6c868941 80 Pfam PF04296 Protein of unknown function (DUF448) 9 74 1.2E-6 T 23-04-2016 IPR007393 Domain of unknown function DUF448 CFF04554_RS07605 709066d203a9191b2276d84e6c868941 80 SUPERFAMILY SSF64376 5 72 1.44E-8 T 23-04-2016 IPR007393 Domain of unknown function DUF448 CFF04554_RS07605 709066d203a9191b2276d84e6c868941 80 Gene3D G3DSA:3.30.1230.10 2 69 3.0E-6 T 23-04-2016 IPR007393 Domain of unknown function DUF448 CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 SMART SM00448 2 111 2.6E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 PANTHER PTHR26402:SF50 2 221 2.6E-61 T 23-04-2016 CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 9.2E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 Pfam PF00072 Response regulator receiver domain 4 111 1.3E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 PANTHER PTHR26402 2 221 2.6E-61 T 23-04-2016 CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 Gene3D G3DSA:3.40.50.2300 1 147 4.1E-35 T 23-04-2016 CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 SUPERFAMILY SSF52172 1 127 2.42E-34 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 SMART SM00862 146 221 3.1E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 SUPERFAMILY SSF46894 133 222 1.67E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CFF04554_RS05865 cbcc4fc6224ead91b0b5ccf6001f7d45 223 Gene3D G3DSA:1.10.10.10 148 221 1.5E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS00845 c59ee7ed7874731606f1f9f4036477b0 469 PANTHER PTHR22773 1 452 2.8E-63 T 23-04-2016 CFF04554_RS00845 c59ee7ed7874731606f1f9f4036477b0 469 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 2 457 13.782 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00845 c59ee7ed7874731606f1f9f4036477b0 469 Pfam PF00361 Proton-conducting membrane transporter 120 408 3.7E-37 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CFF04554_RS00845 c59ee7ed7874731606f1f9f4036477b0 469 PANTHER PTHR22773:SF41 1 452 2.8E-63 T 23-04-2016 CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 Pfam PF00271 Helicase conserved C-terminal domain 414 525 2.5E-13 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 PANTHER PTHR24031:SF249 214 239 2.2E-41 T 23-04-2016 CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 PANTHER PTHR24031:SF249 256 538 2.2E-41 T 23-04-2016 CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 SMART SM00490 446 525 7.2E-11 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 Gene3D G3DSA:3.40.50.300 399 569 8.5E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 PANTHER PTHR24031 214 239 2.2E-41 T 23-04-2016 CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 PANTHER PTHR24031 256 538 2.2E-41 T 23-04-2016 CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 SUPERFAMILY SSF52540 249 535 6.74E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 Gene3D G3DSA:3.40.50.300 213 397 6.6E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 Pfam PF04851 Type III restriction enzyme, res subunit 224 373 7.8E-13 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CFF04554_RS03130 dd1115d43e7800350336b3a876f7aa4f 602 SMART SM00487 222 401 1.3E-25 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS00095 c8c7c42b59765d7399268def153855ca 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 38 310 1.4E-77 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CFF04554_RS00095 c8c7c42b59765d7399268def153855ca 314 SUPERFAMILY SSF161111 36 234 4.58E-52 T 23-04-2016 CFF04554_RS00095 c8c7c42b59765d7399268def153855ca 314 PANTHER PTHR11562:SF17 8 310 9.4E-79 T 23-04-2016 CFF04554_RS00095 c8c7c42b59765d7399268def153855ca 314 Pfam PF01545 Cation efflux family 42 233 5.6E-43 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CFF04554_RS00095 c8c7c42b59765d7399268def153855ca 314 Gene3D G3DSA:3.30.70.1350 237 310 6.8E-5 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CFF04554_RS00095 c8c7c42b59765d7399268def153855ca 314 Gene3D G3DSA:1.20.1510.10 39 233 4.6E-51 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CFF04554_RS00095 c8c7c42b59765d7399268def153855ca 314 SUPERFAMILY SSF160240 235 310 2.35E-9 T 23-04-2016 CFF04554_RS00095 c8c7c42b59765d7399268def153855ca 314 PANTHER PTHR11562 8 310 9.4E-79 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CFF04554_RS07795 1a6e56ed086cc14b37dfce039da1a293 260 PANTHER PTHR13696:SF52 1 259 1.5E-72 T 23-04-2016 CFF04554_RS07795 1a6e56ed086cc14b37dfce039da1a293 260 Pfam PF13614 AAA domain 3 179 9.1E-66 T 23-04-2016 IPR025669 AAA domain CFF04554_RS07795 1a6e56ed086cc14b37dfce039da1a293 260 SUPERFAMILY SSF52540 1 260 5.77E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07795 1a6e56ed086cc14b37dfce039da1a293 260 PANTHER PTHR13696 1 259 1.5E-72 T 23-04-2016 CFF04554_RS07795 1a6e56ed086cc14b37dfce039da1a293 260 Gene3D G3DSA:3.40.50.300 4 259 6.0E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06830 6703d3b6d7543fdb65156a2d88048fd3 264 PANTHER PTHR21057:SF2 1 263 5.3E-130 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CFF04554_RS06830 6703d3b6d7543fdb65156a2d88048fd3 264 SUPERFAMILY SSF51569 2 263 1.92E-88 T 23-04-2016 CFF04554_RS06830 6703d3b6d7543fdb65156a2d88048fd3 264 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 1 264 47.203 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CFF04554_RS06830 6703d3b6d7543fdb65156a2d88048fd3 264 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 1 263 3.7E-115 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CFF04554_RS06830 6703d3b6d7543fdb65156a2d88048fd3 264 PANTHER PTHR21057 1 263 5.3E-130 T 23-04-2016 CFF04554_RS06830 6703d3b6d7543fdb65156a2d88048fd3 264 Gene3D G3DSA:3.20.20.70 1 263 7.6E-120 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS06830 6703d3b6d7543fdb65156a2d88048fd3 264 Pfam PF00793 DAHP synthetase I family 1 253 1.2E-61 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 Pfam PF00005 ABC transporter 333 459 4.5E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 SUPERFAMILY SSF90123 10 294 1.57E-25 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 Pfam PF00664 ABC transporter transmembrane region 12 265 8.0E-12 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 SMART SM00382 342 511 5.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 ProSitePatterns PS00211 ABC transporters family signature. 432 446 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 Gene3D G3DSA:3.40.50.300 318 510 3.0E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 PANTHER PTHR24220 319 511 2.0E-70 T 23-04-2016 CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 PANTHER PTHR24220:SF425 319 511 2.0E-70 T 23-04-2016 CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 Gene3D G3DSA:1.20.1560.10 9 297 2.3E-18 T 23-04-2016 CFF04554_RS08845 2b7d7378f36d75cd0b4ab5fb29c8381c 514 SUPERFAMILY SSF52540 316 510 8.23E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05755 06f01a2e1d6aae65173a86de3019a79f 380 Pfam PF00809 Pterin binding enzyme 121 358 1.3E-58 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CFF04554_RS05755 06f01a2e1d6aae65173a86de3019a79f 380 PIRSF PIRSF000501 1 378 1.0E-142 T 23-04-2016 IPR016227 Dihydropteroate synthase, predicted KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 CFF04554_RS05755 06f01a2e1d6aae65173a86de3019a79f 380 PANTHER PTHR20941 116 378 1.1E-73 T 23-04-2016 CFF04554_RS05755 06f01a2e1d6aae65173a86de3019a79f 380 Gene3D G3DSA:3.20.20.20 115 375 1.1E-75 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 CFF04554_RS05755 06f01a2e1d6aae65173a86de3019a79f 380 SUPERFAMILY SSF51717 111 375 2.09E-75 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CFF04554_RS05755 06f01a2e1d6aae65173a86de3019a79f 380 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 120 370 2.3E-72 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 CFF04554_RS05755 06f01a2e1d6aae65173a86de3019a79f 380 PANTHER PTHR20941:SF1 116 378 1.1E-73 T 23-04-2016 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 SMART SM00322 60 125 0.01 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.3E-39 T 23-04-2016 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 SUPERFAMILY SSF54821 109 206 1.44E-38 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 Gene3D G3DSA:3.30.300.20 17 105 1.7E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 SUPERFAMILY SSF54814 2 105 2.28E-34 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 2.4E-91 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 Gene3D G3DSA:3.30.1140.32 110 207 4.1E-44 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.447 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 PANTHER PTHR11760:SF19 2 210 2.4E-115 T 23-04-2016 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 PANTHER PTHR11760 2 210 2.4E-115 T 23-04-2016 CFF04554_RS00195 47cce655a57f442548f442151f87b11b 232 Pfam PF07650 KH domain 38 107 8.1E-16 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 Pfam PF00813 FliP family 47 239 1.2E-79 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 1.8E-83 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PANTHER PTHR30587 6 244 6.3E-110 T 23-04-2016 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 6.3E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 6.3E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 6.3E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 6.3E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 6.3E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 6.3E-66 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PANTHER PTHR30587:SF0 6 244 6.3E-110 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 1.9E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 1.9E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 1.9E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 1.9E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 1.9E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CFF04554_RS03785 1dcbc48d54424388672b8ffa2d4f4675 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 1.9E-19 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CFF04554_RS01630 c3153dbb73fa6c356cd0d07bf98e36e3 215 Gene3D G3DSA:3.40.50.720 4 177 9.2E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01630 c3153dbb73fa6c356cd0d07bf98e36e3 215 SUPERFAMILY SSF69572 4 213 7.98E-41 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CFF04554_RS01630 c3153dbb73fa6c356cd0d07bf98e36e3 215 PANTHER PTHR10953 1 147 1.5E-31 T 23-04-2016 CFF04554_RS01630 c3153dbb73fa6c356cd0d07bf98e36e3 215 PANTHER PTHR10953 173 186 1.5E-31 T 23-04-2016 CFF04554_RS01630 c3153dbb73fa6c356cd0d07bf98e36e3 215 Pfam PF00899 ThiF family 14 135 2.0E-24 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CFF04554_RS01630 c3153dbb73fa6c356cd0d07bf98e36e3 215 PANTHER PTHR10953:SF145 1 147 1.5E-31 T 23-04-2016 CFF04554_RS01630 c3153dbb73fa6c356cd0d07bf98e36e3 215 PANTHER PTHR10953:SF145 173 186 1.5E-31 T 23-04-2016 CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 SMART SM00471 329 435 7.1E-12 T 23-04-2016 IPR003607 HD/PDEase domain CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 Hamap MF_00335 Ribonuclease Y [rny]. 2 517 22.823 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 PANTHER PTHR12826 209 516 9.8E-101 T 23-04-2016 CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 Pfam PF12072 Domain of unknown function (DUF3552) 4 201 1.4E-22 T 23-04-2016 IPR022711 Ribonuclease Y, N-terminal CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 Gene3D G3DSA:1.10.3210.10 313 492 5.5E-37 T 23-04-2016 IPR006674 HD domain CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 Pfam PF01966 HD domain 335 425 1.4E-16 T 23-04-2016 IPR006674 HD domain CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 SUPERFAMILY SSF54791 205 300 7.82E-12 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 8 517 1.5E-185 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 Gene3D G3DSA:3.30.1370.10 216 272 2.0E-5 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 SUPERFAMILY SSF109604 311 467 2.27E-26 T 23-04-2016 CFF04554_RS02475 4223c2b56d58ac83591ecb9ba1cb3c90 517 TIGRFAM TIGR00277 HDIG: HDIG domain 329 406 5.0E-22 T 23-04-2016 IPR006675 HDIG domain CFF04554_RS01755 0f3ef7dc101380518a173945bab78557 419 PANTHER PTHR11236 61 413 6.2E-123 T 23-04-2016 CFF04554_RS01755 0f3ef7dc101380518a173945bab78557 419 SUPERFAMILY SSF56322 7 412 1.83E-107 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CFF04554_RS01755 0f3ef7dc101380518a173945bab78557 419 Pfam PF00425 chorismate binding enzyme 145 403 3.4E-82 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal CFF04554_RS01755 0f3ef7dc101380518a173945bab78557 419 Gene3D G3DSA:3.60.120.10 59 413 2.1E-118 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CFF04554_RS01755 0f3ef7dc101380518a173945bab78557 419 PRINTS PR00095 Anthranilate synthase component I signature 340 354 6.3E-17 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CFF04554_RS01755 0f3ef7dc101380518a173945bab78557 419 PRINTS PR00095 Anthranilate synthase component I signature 260 273 6.3E-17 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CFF04554_RS01755 0f3ef7dc101380518a173945bab78557 419 PRINTS PR00095 Anthranilate synthase component I signature 355 369 6.3E-17 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CFF04554_RS01755 0f3ef7dc101380518a173945bab78557 419 PRINTS PR00095 Anthranilate synthase component I signature 246 259 6.3E-17 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CFF04554_RS01755 0f3ef7dc101380518a173945bab78557 419 PANTHER PTHR11236:SF9 61 413 6.2E-123 T 23-04-2016 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 PANTHER PTHR11739 8 419 9.8E-155 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 Gene3D G3DSA:1.10.580.10 53 281 8.6E-84 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 PRINTS PR00143 Citrate synthase signature 166 179 9.7E-49 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 PRINTS PR00143 Citrate synthase signature 360 376 9.7E-49 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 PRINTS PR00143 Citrate synthase signature 242 270 9.7E-49 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 PRINTS PR00143 Citrate synthase signature 297 317 9.7E-49 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 PRINTS PR00143 Citrate synthase signature 220 235 9.7E-49 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 PRINTS PR00143 Citrate synthase signature 380 394 9.7E-49 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 Gene3D G3DSA:1.10.230.10 282 374 5.4E-35 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 Pfam PF00285 Citrate synthase, C-terminal domain 47 412 2.4E-122 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 SUPERFAMILY SSF48256 6 420 1.18E-146 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 418 8.7E-161 T 23-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 CFF04554_RS00890 84775a864217e45fd1a2e561c4684aba 425 PIRSF PIRSF001369 38 423 2.7E-141 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 CFF04554_RS02590 06e848a73eeefed286e08adab2a5f079 637 PANTHER PTHR31632 360 624 1.5E-66 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CFF04554_RS02590 06e848a73eeefed286e08adab2a5f079 637 Pfam PF03239 Iron permease FTR1 family 299 544 1.7E-27 T 23-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CFF04554_RS02590 06e848a73eeefed286e08adab2a5f079 637 PANTHER PTHR31632:SF4 360 624 1.5E-66 T 23-04-2016 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 SUPERFAMILY SSF52374 2 295 2.56E-84 T 23-04-2016 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 Gene3D G3DSA:3.90.800.10 66 177 1.2E-25 T 23-04-2016 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 1 427 23.596 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 SUPERFAMILY SSF48163 276 420 9.55E-21 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 301 7.7E-78 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 PANTHER PTHR11451 3 309 1.2E-64 T 23-04-2016 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 Gene3D G3DSA:1.10.1160.10 230 311 4.2E-27 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 200 4.6E-21 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 4.6E-21 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 PRINTS PR00987 Glutamyl-tRNA synthetase signature 176 186 4.6E-21 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 28 4.6E-21 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 4.6E-21 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 6 17 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 PANTHER PTHR11451:SF41 3 309 1.2E-64 T 23-04-2016 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 Gene3D G3DSA:1.10.10.350 378 422 2.0E-6 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 Gene3D G3DSA:3.40.50.620 178 228 9.4E-38 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 Gene3D G3DSA:3.40.50.620 2 65 9.4E-38 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS00525 5acece732b1ad6349488e10d12f26179 429 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 420 1.2E-130 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 SUPERFAMILY SSF46955 396 469 3.11E-15 T 23-04-2016 IPR009061 Putative DNA-binding domain CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 778 4.2E-192 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Gene3D G3DSA:2.40.50.140 43 190 1.6E-43 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Pfam PF03147 Ferredoxin-fold anticodon binding domain 686 778 1.1E-20 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Gene3D G3DSA:3.30.930.10 488 675 5.3E-32 T 23-04-2016 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 SMART SM00896 686 778 4.1E-29 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 SUPERFAMILY SSF55681 461 675 4.82E-26 T 23-04-2016 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 772 32.09 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 SUPERFAMILY SSF56037 218 375 4.45E-8 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Pfam PF03484 tRNA synthetase B5 domain 399 464 1.1E-13 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Gene3D G3DSA:3.30.56.10 1 39 3.8E-23 T 23-04-2016 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Gene3D G3DSA:3.30.70.380 688 778 1.4E-19 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 SUPERFAMILY SSF54991 682 778 3.27E-23 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 SMART SM00874 395 465 7.5E-18 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 SUPERFAMILY SSF50249 43 191 1.2E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 SMART SM00873 216 379 1.7E-5 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Gene3D G3DSA:3.50.40.10 220 363 2.3E-4 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Pfam PF01588 Putative tRNA binding domain 45 139 5.3E-21 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Pfam PF03483 B3/4 domain 239 376 3.9E-7 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 PANTHER PTHR10947:SF0 2 778 7.0E-125 T 23-04-2016 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 Gene3D G3DSA:3.30.56.20 394 469 1.6E-18 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CFF04554_RS06450 bf774c6ef393b3817e73e64d13f8b3ce 778 PANTHER PTHR10947 2 778 7.0E-125 T 23-04-2016 CFF04554_RS08070 3bb2f62f18e70b58ec6739b1e1985446 288 Gene3D G3DSA:3.40.50.970 1 170 4.2E-36 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS08070 3bb2f62f18e70b58ec6739b1e1985446 288 SUPERFAMILY SSF52922 177 286 8.32E-8 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS08070 3bb2f62f18e70b58ec6739b1e1985446 288 Pfam PF02779 Transketolase, pyrimidine binding domain 1 159 1.6E-20 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CFF04554_RS08070 3bb2f62f18e70b58ec6739b1e1985446 288 PANTHER PTHR11624 1 288 1.5E-51 T 23-04-2016 IPR033247 Transketolase family CFF04554_RS08070 3bb2f62f18e70b58ec6739b1e1985446 288 SUPERFAMILY SSF52518 1 160 3.42E-38 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS08070 3bb2f62f18e70b58ec6739b1e1985446 288 PANTHER PTHR11624:SF27 1 288 1.5E-51 T 23-04-2016 CFF04554_RS08070 3bb2f62f18e70b58ec6739b1e1985446 288 SMART SM00861 1 163 1.2E-26 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CFF04554_RS08070 3bb2f62f18e70b58ec6739b1e1985446 288 Gene3D G3DSA:3.40.50.920 184 286 5.4E-7 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 SUPERFAMILY SSF53067 97 307 1.33E-28 T 23-04-2016 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 3 302 1.5E-100 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 149 170 9.4E-36 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 126 138 9.4E-36 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 3 16 9.4E-36 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 72 92 9.4E-36 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 259 268 9.4E-36 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 93 112 9.4E-36 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 Pfam PF00814 Glycoprotease family 30 302 8.2E-76 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 ProSitePatterns PS01016 Glycoprotease family signature. 92 112 - T 23-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 PANTHER PTHR11735:SF6 1 329 1.2E-111 T 23-04-2016 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 Gene3D G3DSA:3.30.420.40 1 138 1.7E-27 T 23-04-2016 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 SUPERFAMILY SSF53067 1 118 6.22E-22 T 23-04-2016 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 328 52.724 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 PANTHER PTHR11735 1 329 1.2E-111 T 23-04-2016 CFF04554_RS01070 dabb7c9546efc6ea07cb7332bce27750 335 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 2 309 6.0E-105 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CFF04554_RS07055 794d148ecb4a9a0025253be35cfadd82 373 SUPERFAMILY SSF53756 4 368 5.83E-64 T 23-04-2016 CFF04554_RS07055 794d148ecb4a9a0025253be35cfadd82 373 Gene3D G3DSA:3.40.50.2000 163 345 1.6E-19 T 23-04-2016 CFF04554_RS07055 794d148ecb4a9a0025253be35cfadd82 373 PANTHER PTHR12526 11 368 1.0E-45 T 23-04-2016 CFF04554_RS07055 794d148ecb4a9a0025253be35cfadd82 373 Pfam PF13439 Glycosyltransferase Family 4 14 182 1.1E-10 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07055 794d148ecb4a9a0025253be35cfadd82 373 Pfam PF00534 Glycosyl transferases group 1 186 345 2.4E-28 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 SMART SM00316 135 203 4.1E-4 T 23-04-2016 IPR022967 RNA-binding domain, S1 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 Gene3D G3DSA:2.40.50.140 138 201 2.1E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 Gene3D G3DSA:3.30.300.20 282 338 5.0E-16 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 PANTHER PTHR22648:SF0 1 337 3.7E-79 T 23-04-2016 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 338 2.6E-98 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 Gene3D G3DSA:3.30.300.20 202 280 1.3E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 Pfam PF13184 NusA-like KH domain 233 301 6.0E-23 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 SUPERFAMILY SSF54814 282 341 1.31E-6 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 Pfam PF08529 NusA N-terminal domain 4 121 6.7E-17 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 SUPERFAMILY SSF54814 203 280 9.81E-25 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 SUPERFAMILY SSF69705 4 121 6.54E-24 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 PANTHER PTHR22648 1 337 3.7E-79 T 23-04-2016 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 SUPERFAMILY SSF50249 129 193 1.37E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 Gene3D G3DSA:3.30.1480.10 3 116 4.5E-20 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CFF04554_RS07030 dff7aa2f930d7fdd67d798b4bdf7707f 365 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 362 22.441 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CFF04554_RS06235 8a0281434d228850ad62f847e4b19b8f 539 PANTHER PTHR30404 177 536 5.5E-63 T 23-04-2016 CFF04554_RS06235 8a0281434d228850ad62f847e4b19b8f 539 SUPERFAMILY SSF53187 316 417 2.01E-49 T 23-04-2016 CFF04554_RS06235 8a0281434d228850ad62f847e4b19b8f 539 SUPERFAMILY SSF53187 455 535 2.01E-49 T 23-04-2016 CFF04554_RS06235 8a0281434d228850ad62f847e4b19b8f 539 SMART SM00646 377 532 6.4E-47 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CFF04554_RS06235 8a0281434d228850ad62f847e4b19b8f 539 PANTHER PTHR30404:SF0 177 536 5.5E-63 T 23-04-2016 CFF04554_RS06235 8a0281434d228850ad62f847e4b19b8f 539 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 318 532 1.5E-48 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CFF04554_RS06235 8a0281434d228850ad62f847e4b19b8f 539 Gene3D G3DSA:3.40.630.40 456 535 1.7E-57 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CFF04554_RS06235 8a0281434d228850ad62f847e4b19b8f 539 Gene3D G3DSA:3.40.630.40 316 416 1.7E-57 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 567 36.49 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 Gene3D G3DSA:3.30.930.10 389 471 3.4E-91 T 23-04-2016 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 Gene3D G3DSA:3.30.930.10 11 234 3.4E-91 T 23-04-2016 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.8E-13 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.8E-13 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.8E-13 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.8E-13 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 SUPERFAMILY SSF55826 218 374 1.2E-22 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 PANTHER PTHR11451:SF3 398 567 1.7E-132 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 PANTHER PTHR11451:SF3 4 244 1.7E-132 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 Gene3D G3DSA:3.40.50.800 472 566 2.3E-22 T 23-04-2016 IPR004154 Anticodon-binding CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 Gene3D G3DSA:3.90.960.10 238 375 6.7E-21 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 PANTHER PTHR11451 398 567 1.7E-132 T 23-04-2016 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 PANTHER PTHR11451 4 244 1.7E-132 T 23-04-2016 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 3 563 3.5E-213 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 Pfam PF04073 Aminoacyl-tRNA editing domain 258 373 1.6E-20 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 7.7E-50 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 SUPERFAMILY SSF52954 462 567 4.98E-24 T 23-04-2016 IPR004154 Anticodon-binding CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 Pfam PF03129 Anticodon binding domain 475 565 2.4E-16 T 23-04-2016 IPR004154 Anticodon-binding CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 SUPERFAMILY SSF55681 10 237 4.64E-93 T 23-04-2016 CFF04554_RS03465 c061c7691a7a7ee08a378da2cb727e58 567 SUPERFAMILY SSF55681 406 477 4.64E-93 T 23-04-2016 CFF04554_RS09375 e33623c6ef812d43aaea109ec1abe9cf 250 Gene3D G3DSA:2.10.109.10 112 247 2.3E-21 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CFF04554_RS09375 e33623c6ef812d43aaea109ec1abe9cf 250 SMART SM00530 5 60 4.0E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CFF04554_RS09375 e33623c6ef812d43aaea109ec1abe9cf 250 SUPERFAMILY SSF51306 110 245 1.31E-21 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CFF04554_RS09375 e33623c6ef812d43aaea109ec1abe9cf 250 Pfam PF01381 Helix-turn-helix 6 60 1.9E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CFF04554_RS09375 e33623c6ef812d43aaea109ec1abe9cf 250 Gene3D G3DSA:1.10.260.40 1 69 5.0E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CFF04554_RS09375 e33623c6ef812d43aaea109ec1abe9cf 250 SUPERFAMILY SSF47413 2 72 3.49E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CFF04554_RS09375 e33623c6ef812d43aaea109ec1abe9cf 250 Pfam PF00717 Peptidase S24-like 162 230 6.7E-11 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CFF04554_RS09375 e33623c6ef812d43aaea109ec1abe9cf 250 PANTHER PTHR40661 2 244 2.3E-20 T 23-04-2016 CFF04554_RS00380 d6e9e7fea427e1900b5e5300ccc51824 386 Gene3D G3DSA:3.20.20.70 55 379 2.7E-40 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS00380 d6e9e7fea427e1900b5e5300ccc51824 386 SUPERFAMILY SSF102114 50 345 1.96E-40 T 23-04-2016 CFF04554_RS00380 d6e9e7fea427e1900b5e5300ccc51824 386 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 271 376 8.1E-24 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CFF04554_RS00380 d6e9e7fea427e1900b5e5300ccc51824 386 PANTHER PTHR22976:SF17 9 385 3.0E-148 T 23-04-2016 CFF04554_RS00380 d6e9e7fea427e1900b5e5300ccc51824 386 SMART SM00876 271 378 2.3E-31 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CFF04554_RS00380 d6e9e7fea427e1900b5e5300ccc51824 386 Pfam PF04055 Radical SAM superfamily 96 208 7.1E-8 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS00380 d6e9e7fea427e1900b5e5300ccc51824 386 PANTHER PTHR22976 9 385 3.0E-148 T 23-04-2016 CFF04554_RS00380 d6e9e7fea427e1900b5e5300ccc51824 386 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 22 385 3.2E-150 T 23-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 CFF04554_RS05820 0c49b6b3d43a100fca3de4d36f73b4da 387 Pfam PF04748 Divergent polysaccharide deacetylase 175 382 4.6E-60 T 23-04-2016 IPR006837 Protein of unknown function DUF610, YibQ CFF04554_RS05820 0c49b6b3d43a100fca3de4d36f73b4da 387 PANTHER PTHR30105 171 384 6.6E-43 T 23-04-2016 CFF04554_RS05820 0c49b6b3d43a100fca3de4d36f73b4da 387 Gene3D G3DSA:3.20.20.370 169 382 5.9E-64 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CFF04554_RS05820 0c49b6b3d43a100fca3de4d36f73b4da 387 SUPERFAMILY SSF88713 170 383 7.78E-55 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CFF04554_RS07825 dddb07c5b5df33ab527108814d4b62bf 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.492 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07825 dddb07c5b5df33ab527108814d4b62bf 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 5.6E-37 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07825 dddb07c5b5df33ab527108814d4b62bf 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 4.0E-35 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CFF04554_RS07825 dddb07c5b5df33ab527108814d4b62bf 102 SUPERFAMILY SSF141091 1 100 3.79E-33 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CFF04554_RS07825 dddb07c5b5df33ab527108814d4b62bf 102 PANTHER PTHR21349 1 101 6.9E-29 T 23-04-2016 CFF04554_RS07825 dddb07c5b5df33ab527108814d4b62bf 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01505 ff4ee9cc8ce1d8c886cbb1e85ec48acd 243 SUPERFAMILY SSF141734 4 108 9.02E-43 T 23-04-2016 CFF04554_RS01505 ff4ee9cc8ce1d8c886cbb1e85ec48acd 243 PANTHER PTHR21256 191 243 1.1E-78 T 23-04-2016 CFF04554_RS01505 ff4ee9cc8ce1d8c886cbb1e85ec48acd 243 PANTHER PTHR21256 5 170 1.1E-78 T 23-04-2016 CFF04554_RS01505 ff4ee9cc8ce1d8c886cbb1e85ec48acd 243 SUPERFAMILY SSF101386 120 230 1.87E-17 T 23-04-2016 CFF04554_RS01505 ff4ee9cc8ce1d8c886cbb1e85ec48acd 243 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 26 100 1.2E-31 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CFF04554_RS01505 ff4ee9cc8ce1d8c886cbb1e85ec48acd 243 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 119 226 16.452 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CFF04554_RS01505 ff4ee9cc8ce1d8c886cbb1e85ec48acd 243 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 49 103 1.0E-14 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CFF04554_RS01505 ff4ee9cc8ce1d8c886cbb1e85ec48acd 243 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 1 231 32.381 T 23-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 CFF04554_RS01505 ff4ee9cc8ce1d8c886cbb1e85ec48acd 243 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 131 229 5.3E-9 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 Pfam PF01938 TRAM domain 361 418 1.2E-5 T 23-04-2016 IPR002792 TRAM domain CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 SMART SM00729 127 348 1.5E-49 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 416 2.9E-128 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 PANTHER PTHR11918:SF43 1 419 1.8E-124 T 23-04-2016 CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 131 151 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 SUPERFAMILY SSF102114 97 352 3.92E-53 T 23-04-2016 CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 Pfam PF04055 Radical SAM superfamily 131 304 7.4E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 Pfam PF00919 Uncharacterized protein family UPF0004 1 89 8.3E-21 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 Gene3D G3DSA:3.80.30.20 127 356 1.3E-69 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 PANTHER PTHR11918 1 419 1.8E-124 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CFF04554_RS07020 c5220339d179de646725d05a8b9e299a 419 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 419 3.1E-171 T 23-04-2016 CFF04554_RS08420 1461cd4808550aaa7ecc4b0c0162acd9 569 PANTHER PTHR23073 342 533 1.2E-24 T 23-04-2016 CFF04554_RS08420 1461cd4808550aaa7ecc4b0c0162acd9 569 PANTHER PTHR23073 179 190 1.2E-24 T 23-04-2016 CFF04554_RS08420 1461cd4808550aaa7ecc4b0c0162acd9 569 SUPERFAMILY SSF52540 306 562 8.77E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08420 1461cd4808550aaa7ecc4b0c0162acd9 569 Gene3D G3DSA:3.40.50.300 297 517 2.6E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08420 1461cd4808550aaa7ecc4b0c0162acd9 569 PANTHER PTHR23073:SF24 342 533 1.2E-24 T 23-04-2016 CFF04554_RS08420 1461cd4808550aaa7ecc4b0c0162acd9 569 PANTHER PTHR23073:SF24 179 190 1.2E-24 T 23-04-2016 CFF04554_RS08420 1461cd4808550aaa7ecc4b0c0162acd9 569 SMART SM00382 349 487 1.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS08420 1461cd4808550aaa7ecc4b0c0162acd9 569 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 484 4.1E-29 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 PANTHER PTHR23135 60 428 1.1E-116 T 23-04-2016 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 Gene3D G3DSA:3.90.190.20 284 419 6.3E-47 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 58 426 5.6E-119 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 426 26.602 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 PANTHER PTHR23135:SF4 60 428 1.1E-116 T 23-04-2016 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 SUPERFAMILY SSF53623 59 273 3.27E-54 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 Pfam PF08245 Mur ligase middle domain 65 257 8.0E-39 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 Pfam PF02875 Mur ligase family, glutamate ligase domain 280 360 5.5E-19 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 Gene3D G3DSA:3.40.1190.10 60 283 2.5E-57 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS00315 8493df3b4b1724496bbd344759cde045 429 SUPERFAMILY SSF53244 280 427 2.44E-40 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS05430 b0cf578318e65fe81ff71a8bf47cec47 90 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.914 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CFF04554_RS05430 b0cf578318e65fe81ff71a8bf47cec47 90 Gene3D G3DSA:1.10.287.10 3 89 1.0E-37 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CFF04554_RS05430 b0cf578318e65fe81ff71a8bf47cec47 90 Pfam PF00312 Ribosomal protein S15 8 88 3.5E-35 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05430 b0cf578318e65fe81ff71a8bf47cec47 90 SMART SM01387 8 88 1.7E-49 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05430 b0cf578318e65fe81ff71a8bf47cec47 90 PANTHER PTHR23321 1 89 3.1E-43 T 23-04-2016 CFF04554_RS05430 b0cf578318e65fe81ff71a8bf47cec47 90 SUPERFAMILY SSF47060 3 89 6.77E-34 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CFF04554_RS05430 b0cf578318e65fe81ff71a8bf47cec47 90 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 88 1.1E-36 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CFF04554_RS05430 b0cf578318e65fe81ff71a8bf47cec47 90 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-18 T 23-04-2016 CFF04554_RS05430 b0cf578318e65fe81ff71a8bf47cec47 90 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 SUPERFAMILY SSF52540 41 268 3.62E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 423 1.8E-8 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 PRINTS PR01874 DNA repair protein radA signature 246 272 5.4E-88 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 PRINTS PR01874 DNA repair protein radA signature 80 108 5.4E-88 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 PRINTS PR01874 DNA repair protein radA signature 211 239 5.4E-88 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 PRINTS PR01874 DNA repair protein radA signature 172 196 5.4E-88 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 PRINTS PR01874 DNA repair protein radA signature 122 139 5.4E-88 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 PRINTS PR01874 DNA repair protein radA signature 317 340 5.4E-88 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 PRINTS PR01874 DNA repair protein radA signature 10 34 5.4E-88 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 Gene3D G3DSA:3.30.230.10 290 446 1.2E-26 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 SUPERFAMILY SSF54211 300 446 5.31E-30 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 SUPERFAMILY SSF54211 253 267 5.31E-30 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 PANTHER PTHR32472 1 422 4.3E-169 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 Pfam PF13481 AAA domain 70 220 1.7E-14 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 Gene3D G3DSA:3.40.50.300 59 272 9.2E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 PANTHER PTHR32472:SF10 1 422 4.3E-169 T 23-04-2016 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 442 1.2E-182 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CFF04554_RS02455 0b1ef35f0bb1a48e0ea9c84fedd3c3bc 446 SMART SM00382 88 242 7.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 374 5.0E-54 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 PANTHER PTHR10314 5 385 7.5E-217 T 23-04-2016 CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 Gene3D G3DSA:3.40.50.1100 95 172 1.7E-15 T 23-04-2016 CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 387 50.534 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 PIRSF PIRSF001413 1 393 1.1E-169 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 78 92 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 PANTHER PTHR10314:SF3 5 385 7.5E-217 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 Gene3D G3DSA:3.40.50.1100 173 389 4.3E-88 T 23-04-2016 CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 5 386 6.7E-187 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CFF04554_RS01770 f0cb55559dc0918dc4f38b40783732ca 393 SUPERFAMILY SSF53686 4 386 2.36E-143 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS01370 9cb2feabc0c826fd583fad4f4a592279 535 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 143 6.5E-19 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS01370 9cb2feabc0c826fd583fad4f4a592279 535 PANTHER PTHR32552 18 245 3.0E-20 T 23-04-2016 CFF04554_RS01370 9cb2feabc0c826fd583fad4f4a592279 535 Gene3D G3DSA:2.40.170.20 147 518 1.8E-32 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS01370 9cb2feabc0c826fd583fad4f4a592279 535 SUPERFAMILY SSF56935 20 518 3.97E-62 T 23-04-2016 CFF04554_RS01370 9cb2feabc0c826fd583fad4f4a592279 535 PANTHER PTHR32552:SF25 18 245 3.0E-20 T 23-04-2016 CFF04554_RS01370 9cb2feabc0c826fd583fad4f4a592279 535 Gene3D G3DSA:2.170.130.10 20 146 4.5E-28 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS00220 7614979e4aebc9c1ae9b656560ece46e 77 Pfam PF00467 KOW motif 9 40 2.4E-7 T 23-04-2016 IPR005824 KOW CFF04554_RS00220 7614979e4aebc9c1ae9b656560ece46e 77 SUPERFAMILY SSF50104 4 75 2.11E-24 T 23-04-2016 IPR008991 Translation protein SH3-like domain CFF04554_RS00220 7614979e4aebc9c1ae9b656560ece46e 77 PANTHER PTHR12903 4 73 1.4E-22 T 23-04-2016 CFF04554_RS00220 7614979e4aebc9c1ae9b656560ece46e 77 Gene3D G3DSA:2.30.30.30 4 75 2.9E-20 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CFF04554_RS00220 7614979e4aebc9c1ae9b656560ece46e 77 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 5 75 2.2E-26 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00220 7614979e4aebc9c1ae9b656560ece46e 77 SMART SM00739 6 33 7.1E-6 T 23-04-2016 IPR005824 KOW CFF04554_RS00220 7614979e4aebc9c1ae9b656560ece46e 77 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 42 75 3.9E-10 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00220 7614979e4aebc9c1ae9b656560ece46e 77 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 5 76 15.393 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00220 7614979e4aebc9c1ae9b656560ece46e 77 ProSitePatterns PS01108 Ribosomal protein L24 signature. 10 27 - T 23-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS03800 4f2ce6a6556df9cbdd9da5dc8a47be08 337 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 2 336 3.9E-106 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CFF04554_RS03800 4f2ce6a6556df9cbdd9da5dc8a47be08 337 Pfam PF02445 Quinolinate synthetase A protein 7 335 2.0E-98 T 23-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 CFF04554_RS03800 4f2ce6a6556df9cbdd9da5dc8a47be08 337 PANTHER PTHR30573:SF0 4 337 4.8E-106 T 23-04-2016 CFF04554_RS03800 4f2ce6a6556df9cbdd9da5dc8a47be08 337 SUPERFAMILY SSF142754 4 336 6.54E-94 T 23-04-2016 CFF04554_RS03800 4f2ce6a6556df9cbdd9da5dc8a47be08 337 PANTHER PTHR30573 4 337 4.8E-106 T 23-04-2016 CFF04554_RS00870 988270bcddba6f6a992549d18ed3335b 217 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS00870 988270bcddba6f6a992549d18ed3335b 217 Pfam PF00005 ABC transporter 21 167 4.0E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS00870 988270bcddba6f6a992549d18ed3335b 217 SMART SM00382 29 211 7.7E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS00870 988270bcddba6f6a992549d18ed3335b 217 PANTHER PTHR24220 6 210 1.1E-60 T 23-04-2016 CFF04554_RS00870 988270bcddba6f6a992549d18ed3335b 217 Gene3D G3DSA:3.40.50.300 5 210 1.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00870 988270bcddba6f6a992549d18ed3335b 217 SUPERFAMILY SSF52540 6 212 3.63E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 PANTHER PTHR30566 238 513 3.7E-60 T 23-04-2016 CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 PANTHER PTHR30566 547 607 3.7E-60 T 23-04-2016 CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 SUPERFAMILY SSF82689 545 606 1.44E-8 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 SUPERFAMILY SSF82689 476 515 1.44E-8 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 Gene3D G3DSA:3.30.70.100 476 590 2.0E-10 T 23-04-2016 CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 Gene3D G3DSA:2.30.30.60 421 469 3.1E-20 T 23-04-2016 CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 SUPERFAMILY SSF50182 404 470 8.17E-19 T 23-04-2016 IPR010920 LSM domain CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 SUPERFAMILY SSF82861 319 403 5.23E-12 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 PANTHER PTHR30566:SF5 238 513 3.7E-60 T 23-04-2016 CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 PANTHER PTHR30566:SF5 547 607 3.7E-60 T 23-04-2016 CFF04554_RS08750 ebee1d87312a6a72c64c988fc379d81d 624 Pfam PF00924 Mechanosensitive ion channel 362 590 1.8E-66 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CFF04554_RS06480 825b7de61060213e27e70ba13acf5bc5 718 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 1 703 15.009 T 23-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CFF04554_RS06480 825b7de61060213e27e70ba13acf5bc5 718 Pfam PF13100 OstA-like protein 13 80 4.2E-5 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal CFF04554_RS06480 825b7de61060213e27e70ba13acf5bc5 718 Gene3D G3DSA:2.60.450.10 23 91 1.3E-8 T 23-04-2016 CFF04554_RS06480 825b7de61060213e27e70ba13acf5bc5 718 PANTHER PTHR30189 13 656 2.9E-13 T 23-04-2016 CFF04554_RS03125 bd904f990f3cb150a91ca38eab651294 407 Gene3D G3DSA:3.30.830.10 233 392 7.9E-23 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CFF04554_RS03125 bd904f990f3cb150a91ca38eab651294 407 Pfam PF00675 Insulinase (Peptidase family M16) 21 160 1.8E-5 T 23-04-2016 IPR011765 Peptidase M16, N-terminal CFF04554_RS03125 bd904f990f3cb150a91ca38eab651294 407 SUPERFAMILY SSF63411 16 194 8.25E-26 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CFF04554_RS03125 bd904f990f3cb150a91ca38eab651294 407 Gene3D G3DSA:3.30.830.10 23 194 8.3E-22 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CFF04554_RS03125 bd904f990f3cb150a91ca38eab651294 407 Pfam PF05193 Peptidase M16 inactive domain 167 337 9.9E-16 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CFF04554_RS03125 bd904f990f3cb150a91ca38eab651294 407 SUPERFAMILY SSF63411 226 392 5.58E-31 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CFF04554_RS03125 bd904f990f3cb150a91ca38eab651294 407 PANTHER PTHR11851 23 349 1.2E-30 T 23-04-2016 CFF04554_RS03125 bd904f990f3cb150a91ca38eab651294 407 PANTHER PTHR11851:SF140 23 349 1.2E-30 T 23-04-2016 CFF04554_RS02385 53d72662195739e650f16e13eb4ea962 1308 PRINTS PR00313 NodO calcium binding signature 440 448 4.8E-8 T 23-04-2016 CFF04554_RS02385 53d72662195739e650f16e13eb4ea962 1308 PRINTS PR00313 NodO calcium binding signature 970 978 4.8E-8 T 23-04-2016 CFF04554_RS02385 53d72662195739e650f16e13eb4ea962 1308 PRINTS PR00313 NodO calcium binding signature 232 243 4.8E-8 T 23-04-2016 CFF04554_RS02385 53d72662195739e650f16e13eb4ea962 1308 PRINTS PR00313 NodO calcium binding signature 1074 1083 4.8E-8 T 23-04-2016 CFF04554_RS08575 08924b0bafd3c4d41de2397891ff5890 183 Pfam PF01814 Hemerythrin HHE cation binding domain 16 120 2.7E-9 T 23-04-2016 IPR012312 Haemerythrin-like CFF04554_RS08575 08924b0bafd3c4d41de2397891ff5890 183 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 23-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 CFF04554_RS08575 08924b0bafd3c4d41de2397891ff5890 183 SUPERFAMILY SSF47188 1 125 1.83E-27 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CFF04554_RS08575 08924b0bafd3c4d41de2397891ff5890 183 PANTHER PTHR37164 1 142 6.5E-20 T 23-04-2016 CFF04554_RS08575 08924b0bafd3c4d41de2397891ff5890 183 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 126 2.1E-30 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CFF04554_RS08575 08924b0bafd3c4d41de2397891ff5890 183 Gene3D G3DSA:1.20.120.50 2 126 4.7E-30 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CFF04554_RS08535 37755d8fdfe5c95fadbdfc1a48d1f6d5 360 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 344 1.4E-13 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS08535 37755d8fdfe5c95fadbdfc1a48d1f6d5 360 Gene3D G3DSA:3.30.70.270 201 344 2.1E-15 T 23-04-2016 CFF04554_RS08535 37755d8fdfe5c95fadbdfc1a48d1f6d5 360 SUPERFAMILY SSF55073 206 340 6.04E-14 T 23-04-2016 IPR029787 Nucleotide cyclase CFF04554_RS08535 37755d8fdfe5c95fadbdfc1a48d1f6d5 360 SMART SM00267 188 358 1.9E-6 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS08535 37755d8fdfe5c95fadbdfc1a48d1f6d5 360 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 196 346 8.6E-16 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 Gene3D G3DSA:3.40.50.740 73 171 4.1E-29 T 23-04-2016 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 Gene3D G3DSA:3.40.50.740 382 477 4.1E-29 T 23-04-2016 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 Gene3D G3DSA:3.40.228.10 192 381 9.2E-48 T 23-04-2016 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 Pfam PF00384 Molybdopterin oxidoreductase 80 533 1.0E-62 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 Pfam PF01568 Molydopterin dinucleotide binding domain 648 767 1.3E-24 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 PANTHER PTHR11615:SF19 48 792 9.5E-180 T 23-04-2016 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 PANTHER PTHR11615 48 792 9.5E-180 T 23-04-2016 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 687 714 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 SUPERFAMILY SSF53706 40 650 9.16E-142 T 23-04-2016 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 SUPERFAMILY SSF50692 638 792 4.59E-40 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 Gene3D G3DSA:2.40.40.20 623 783 1.0E-55 T 23-04-2016 CFF04554_RS02145 1c0ae219a88c814e81f74a0618c4b67f 793 Gene3D G3DSA:3.90.55.10 478 579 3.4E-22 T 23-04-2016 CFF04554_RS02645 86f7a5557c371135b432326aa1ada792 206 PANTHER PTHR30399 4 205 9.4E-29 T 23-04-2016 CFF04554_RS02645 86f7a5557c371135b432326aa1ada792 206 Pfam PF01863 Protein of unknown function DUF45 23 204 1.8E-44 T 23-04-2016 IPR002725 Protein of unknown function DUF45 CFF04554_RS07590 273ac94f5c06533e8d5edc4808fa1353 140 Gene3D G3DSA:2.30.30.180 82 136 9.2E-6 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CFF04554_RS07590 273ac94f5c06533e8d5edc4808fa1353 140 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 2 140 20.06 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CFF04554_RS07590 273ac94f5c06533e8d5edc4808fa1353 140 SUPERFAMILY SSF75420 5 75 8.5E-18 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CFF04554_RS07590 273ac94f5c06533e8d5edc4808fa1353 140 Gene3D G3DSA:3.30.300.70 4 72 2.8E-20 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CFF04554_RS07590 273ac94f5c06533e8d5edc4808fa1353 140 Pfam PF02576 Putative ribosome maturation factor RimP 6 135 2.9E-35 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CFF04554_RS07590 273ac94f5c06533e8d5edc4808fa1353 140 PANTHER PTHR33867:SF1 12 140 5.3E-23 T 23-04-2016 CFF04554_RS07590 273ac94f5c06533e8d5edc4808fa1353 140 SUPERFAMILY SSF74942 76 140 1.57E-9 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CFF04554_RS07590 273ac94f5c06533e8d5edc4808fa1353 140 PANTHER PTHR33867 12 140 5.3E-23 T 23-04-2016 CFF04554_RS03480 907e50190b4b8b207e79239c33066844 266 PANTHER PTHR30213 1 257 2.9E-37 T 23-04-2016 CFF04554_RS03480 907e50190b4b8b207e79239c33066844 266 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 12 257 8.3E-47 T 23-04-2016 IPR017039 Virulence factor BrkB CFF04554_RS03480 907e50190b4b8b207e79239c33066844 266 Pfam PF03631 Virulence factor BrkB 18 257 1.8E-43 T 23-04-2016 IPR017039 Virulence factor BrkB CFF04554_RS03480 907e50190b4b8b207e79239c33066844 266 PANTHER PTHR30213:SF0 1 257 2.9E-37 T 23-04-2016 CFF04554_RS03480 907e50190b4b8b207e79239c33066844 266 PIRSF PIRSF035875 1 263 7.5E-43 T 23-04-2016 IPR017039 Virulence factor BrkB CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 9.8E-33 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 41.638 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 SUPERFAMILY SSF55957 360 445 6.8E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 Gene3D G3DSA:3.40.120.10 177 251 2.2E-25 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 Gene3D G3DSA:3.30.310.50 365 439 6.3E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 391 435 4.4E-6 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 PANTHER PTHR22573:SF15 1 444 5.1E-138 T 23-04-2016 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 254 2.9E-20 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 SUPERFAMILY SSF53738 156 257 8.24E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 8.1E-9 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 8.1E-9 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 SUPERFAMILY SSF53738 2 181 1.22E-46 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 Gene3D G3DSA:3.40.120.10 252 364 6.2E-34 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 436 5.7E-157 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 Gene3D G3DSA:3.40.120.10 2 141 9.3E-45 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 PANTHER PTHR22573 1 444 5.1E-138 T 23-04-2016 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 SUPERFAMILY SSF53738 259 366 6.67E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS08655 5750c00d49d671d0e0e6537db79e8c6d 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 133 4.7E-45 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CFF04554_RS02060 b4eac57ec9cc4884f4205a9e188f63b7 358 PANTHER PTHR23264 1 334 3.9E-124 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CFF04554_RS02060 b4eac57ec9cc4884f4205a9e188f63b7 358 Hamap MF_02040 Iron-sulfur cluster carrier protein. 81 330 35.474 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CFF04554_RS02060 b4eac57ec9cc4884f4205a9e188f63b7 358 Gene3D G3DSA:3.40.50.300 82 328 1.4E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02060 b4eac57ec9cc4884f4205a9e188f63b7 358 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 86 329 3.2E-94 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein CFF04554_RS02060 b4eac57ec9cc4884f4205a9e188f63b7 358 SUPERFAMILY SSF52540 90 335 1.08E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02060 b4eac57ec9cc4884f4205a9e188f63b7 358 SUPERFAMILY SSF117916 2 55 1.28E-6 T 23-04-2016 CFF04554_RS02060 b4eac57ec9cc4884f4205a9e188f63b7 358 PANTHER PTHR23264:SF19 1 334 3.9E-124 T 23-04-2016 CFF04554_RS02265 05d84e6ddd63ec3e7a1786506eb4304e 365 Gene3D G3DSA:1.20.950.20 22 181 2.9E-16 T 23-04-2016 CFF04554_RS02265 05d84e6ddd63ec3e7a1786506eb4304e 365 Pfam PF09626 Dihaem cytochrome c 237 354 1.7E-38 T 23-04-2016 IPR018588 Dihaem cytochrome c CFF04554_RS02265 05d84e6ddd63ec3e7a1786506eb4304e 365 Pfam PF01292 Prokaryotic cytochrome b561 7 178 1.5E-18 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CFF04554_RS02265 05d84e6ddd63ec3e7a1786506eb4304e 365 SUPERFAMILY SSF81342 2 182 4.24E-29 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CFF04554_RS02515 7a94d4fb3f253cc9bb8395c068e98e4f 124 Gene3D G3DSA:1.10.150.280 15 75 6.4E-20 T 23-04-2016 CFF04554_RS02515 7a94d4fb3f253cc9bb8395c068e98e4f 124 SMART SM00278 55 74 220.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CFF04554_RS02515 7a94d4fb3f253cc9bb8395c068e98e4f 124 SMART SM00278 26 45 0.17 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CFF04554_RS02515 7a94d4fb3f253cc9bb8395c068e98e4f 124 SUPERFAMILY SSF47781 16 74 3.33E-20 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CFF04554_RS02515 7a94d4fb3f253cc9bb8395c068e98e4f 124 Pfam PF12836 Helix-hairpin-helix motif 18 73 1.9E-17 T 23-04-2016 CFF04554_RS02515 7a94d4fb3f253cc9bb8395c068e98e4f 124 PANTHER PTHR21180 6 68 1.8E-16 T 23-04-2016 CFF04554_RS02950 7a94d4fb3f253cc9bb8395c068e98e4f 124 Gene3D G3DSA:1.10.150.280 15 75 6.4E-20 T 23-04-2016 CFF04554_RS02950 7a94d4fb3f253cc9bb8395c068e98e4f 124 SMART SM00278 55 74 220.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CFF04554_RS02950 7a94d4fb3f253cc9bb8395c068e98e4f 124 SMART SM00278 26 45 0.17 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CFF04554_RS02950 7a94d4fb3f253cc9bb8395c068e98e4f 124 SUPERFAMILY SSF47781 16 74 3.33E-20 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CFF04554_RS02950 7a94d4fb3f253cc9bb8395c068e98e4f 124 Pfam PF12836 Helix-hairpin-helix motif 18 73 1.9E-17 T 23-04-2016 CFF04554_RS02950 7a94d4fb3f253cc9bb8395c068e98e4f 124 PANTHER PTHR21180 6 68 1.8E-16 T 23-04-2016 CFF04554_RS00895 119c486e668148b6f89f87390ccc2f6a 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 35 55 1.0E-5 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CFF04554_RS00895 119c486e668148b6f89f87390ccc2f6a 260 PRINTS PR00377 Inositol monophosphatase superfamily signature 195 219 1.0E-5 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CFF04554_RS00895 119c486e668148b6f89f87390ccc2f6a 260 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 198 212 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CFF04554_RS00895 119c486e668148b6f89f87390ccc2f6a 260 PANTHER PTHR20854:SF5 1 253 8.2E-55 T 23-04-2016 CFF04554_RS00895 119c486e668148b6f89f87390ccc2f6a 260 Gene3D G3DSA:3.30.540.10 1 139 2.5E-36 T 23-04-2016 CFF04554_RS00895 119c486e668148b6f89f87390ccc2f6a 260 SUPERFAMILY SSF56655 1 242 1.26E-59 T 23-04-2016 CFF04554_RS00895 119c486e668148b6f89f87390ccc2f6a 260 Gene3D G3DSA:3.40.190.80 157 241 1.2E-24 T 23-04-2016 CFF04554_RS00895 119c486e668148b6f89f87390ccc2f6a 260 Pfam PF00459 Inositol monophosphatase family 2 239 7.0E-40 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CFF04554_RS00895 119c486e668148b6f89f87390ccc2f6a 260 PANTHER PTHR20854 1 253 8.2E-55 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 SUPERFAMILY SSF74778 4 160 6.93E-51 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 Gene3D G3DSA:3.20.19.10 164 349 1.6E-84 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 4 848 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 Gene3D G3DSA:3.30.499.10 393 509 2.1E-57 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 PANTHER PTHR11670 294 847 6.2E-286 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 PIRSF PIRSF036687 1 852 0.0 T 23-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 SUPERFAMILY SSF52016 163 361 3.14E-55 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 Gene3D G3DSA:3.30.499.10 673 847 5.1E-46 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 PANTHER PTHR11670:SF39 294 847 6.2E-286 T 23-04-2016 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 Pfam PF06434 Aconitate hydratase 2 N-terminus 170 371 1.6E-91 T 23-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 ProSitePatterns PS00450 Aconitase family signature 1. 697 714 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 Gene3D G3DSA:3.40.1060.10 510 672 1.4E-81 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 Pfam PF11791 Aconitate B N-terminal domain 7 157 4.6E-53 T 23-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 ProSitePatterns PS01244 Aconitase family signature 2. 755 768 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 SUPERFAMILY SSF53732 368 847 1.7E-139 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS04940 b7f3a3230798896bf2b42b85a5f5728b 852 Pfam PF00330 Aconitase family (aconitate hydratase) 461 812 2.2E-41 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SUPERFAMILY SSF50249 205 283 1.27E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Gene3D G3DSA:2.40.50.140 366 445 1.8E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Gene3D G3DSA:2.40.50.140 205 282 4.5E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Gene3D G3DSA:2.40.50.140 119 185 2.4E-6 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SUPERFAMILY SSF50249 449 550 6.86E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 PRINTS PR00681 Ribosomal protein S1 signature 167 187 1.3E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 PRINTS PR00681 Ribosomal protein S1 signature 35 53 1.3E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 PRINTS PR00681 Ribosomal protein S1 signature 224 245 1.3E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 PRINTS PR00681 Ribosomal protein S1 signature 53 67 1.3E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 PRINTS PR00681 Ribosomal protein S1 signature 342 360 1.3E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 PRINTS PR00681 Ribosomal protein S1 signature 302 321 1.3E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Gene3D G3DSA:2.40.50.140 458 536 2.2E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 PANTHER PTHR10724:SF6 15 520 5.2E-124 T 23-04-2016 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SMART SM00316 202 272 1.3E-20 T 23-04-2016 IPR022967 RNA-binding domain, S1 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SMART SM00316 33 99 3.2E-9 T 23-04-2016 IPR022967 RNA-binding domain, S1 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SMART SM00316 459 526 1.8E-16 T 23-04-2016 IPR022967 RNA-binding domain, S1 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SMART SM00316 117 183 1.9 T 23-04-2016 IPR022967 RNA-binding domain, S1 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SMART SM00316 287 359 1.7E-24 T 23-04-2016 IPR022967 RNA-binding domain, S1 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SMART SM00316 374 444 2.4E-22 T 23-04-2016 IPR022967 RNA-binding domain, S1 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 PANTHER PTHR10724 15 520 5.2E-124 T 23-04-2016 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Pfam PF00575 S1 RNA binding domain 205 272 7.0E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Pfam PF00575 S1 RNA binding domain 372 442 1.9E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Pfam PF00575 S1 RNA binding domain 33 93 5.5E-5 T 23-04-2016 IPR003029 S1 domain GO:0003676 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Pfam PF00575 S1 RNA binding domain 287 359 6.3E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Pfam PF00575 S1 RNA binding domain 458 526 2.8E-10 T 23-04-2016 IPR003029 S1 domain GO:0003676 CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SUPERFAMILY SSF50249 130 196 5.34E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SUPERFAMILY SSF50249 355 450 1.94E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Gene3D G3DSA:2.40.50.140 29 103 3.1E-10 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 Gene3D G3DSA:2.40.50.140 283 363 2.4E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SUPERFAMILY SSF50249 23 117 4.36E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 3b19573b571e01c00fe965d195eb0f62 557 SUPERFAMILY SSF50249 272 364 5.56E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 PIRSF PIRSF000375 12 333 8.1E-108 T 23-04-2016 IPR016217 Nitrogen fixation, NifU CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 SUPERFAMILY SSF82649 14 157 3.4E-36 T 23-04-2016 CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 PANTHER PTHR10093 6 205 2.4E-80 T 23-04-2016 CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 267 333 6.0E-14 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 Gene3D G3DSA:3.90.1010.10 14 155 4.5E-39 T 23-04-2016 CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 Pfam PF01106 NifU-like domain 259 330 3.1E-19 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 Pfam PF01592 NifU-like N terminal domain 14 148 6.3E-48 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 PANTHER PTHR10093:SF1 6 205 2.4E-80 T 23-04-2016 CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 Pfam PF04324 BFD-like [2Fe-2S] binding domain 159 201 4.5E-11 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain CFF04554_RS08565 5a8be23b0143a251ef1d8b4bfdf2a760 333 SUPERFAMILY SSF117916 249 333 6.54E-18 T 23-04-2016 CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 PANTHER PTHR13370:SF8 12 255 3.0E-26 T 23-04-2016 CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 Pfam PF01555 DNA methylase 30 244 1.9E-49 T 23-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 32 38 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 PANTHER PTHR13370 12 255 3.0E-26 T 23-04-2016 CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 SUPERFAMILY SSF53335 10 252 5.06E-59 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 Gene3D G3DSA:3.40.50.150 6 255 4.0E-59 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 203 1.2E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 76 96 1.2E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 205 223 1.2E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 28 42 1.2E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CFF04554_RS01605 e7f671a2aefd55e669d13329a3bad7a6 274 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 228 248 1.2E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CFF04554_RS01955 9db8503abb3072e30521197b04ed3bea 274 SUPERFAMILY SSF50182 105 171 7.85E-17 T 23-04-2016 IPR010920 LSM domain CFF04554_RS01955 9db8503abb3072e30521197b04ed3bea 274 SUPERFAMILY SSF82689 174 269 1.83E-32 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CFF04554_RS01955 9db8503abb3072e30521197b04ed3bea 274 Gene3D G3DSA:3.30.70.100 174 258 8.0E-30 T 23-04-2016 CFF04554_RS01955 9db8503abb3072e30521197b04ed3bea 274 SUPERFAMILY SSF82861 20 104 2.09E-18 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CFF04554_RS01955 9db8503abb3072e30521197b04ed3bea 274 PANTHER PTHR30221:SF7 19 265 9.7E-76 T 23-04-2016 CFF04554_RS01955 9db8503abb3072e30521197b04ed3bea 274 PANTHER PTHR30221 19 265 9.7E-76 T 23-04-2016 CFF04554_RS01955 9db8503abb3072e30521197b04ed3bea 274 Gene3D G3DSA:2.30.30.60 121 170 8.0E-18 T 23-04-2016 CFF04554_RS01955 9db8503abb3072e30521197b04ed3bea 274 Pfam PF00924 Mechanosensitive ion channel 67 260 1.3E-55 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 Gene3D G3DSA:3.40.50.1980 370 469 1.1E-34 T 23-04-2016 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 126 306 1.2E-72 T 23-04-2016 IPR015304 ZinT domain GO:0008270 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 Gene3D G3DSA:3.40.50.1980 18 119 1.3E-51 T 23-04-2016 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 Gene3D G3DSA:3.40.50.1980 306 369 1.3E-51 T 23-04-2016 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 SUPERFAMILY SSF50814 121 306 7.76E-60 T 23-04-2016 IPR011038 Calycin-like CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 Pfam PF01297 Zinc-uptake complex component A periplasmic 21 467 1.1E-70 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 PANTHER PTHR30477 301 462 1.6E-60 T 23-04-2016 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 PANTHER PTHR30477 7 107 1.6E-60 T 23-04-2016 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 PANTHER PTHR30477:SF1 301 462 1.6E-60 T 23-04-2016 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 PANTHER PTHR30477:SF1 7 107 1.6E-60 T 23-04-2016 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 SUPERFAMILY SSF53807 18 128 2.3E-80 T 23-04-2016 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 SUPERFAMILY SSF53807 302 469 2.3E-80 T 23-04-2016 CFF04554_RS08725 3971c2ded797e15d0b7b5f7f3b05bf72 469 Gene3D G3DSA:2.40.128.20 120 305 7.7E-69 T 23-04-2016 IPR012674 Calycin CFF04554_RS06555 a6ca18b94c8d88107e02e96f2374929e 588 PANTHER PTHR10010 4 463 7.7E-31 T 23-04-2016 CFF04554_RS06555 a6ca18b94c8d88107e02e96f2374929e 588 Pfam PF02690 Na+/Pi-cotransporter 32 169 6.8E-29 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 CFF04554_RS06555 a6ca18b94c8d88107e02e96f2374929e 588 Pfam PF02690 Na+/Pi-cotransporter 194 289 8.6E-12 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 CFF04554_RS06555 a6ca18b94c8d88107e02e96f2374929e 588 PANTHER PTHR10010:SF26 4 463 7.7E-31 T 23-04-2016 CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 PANTHER PTHR30034:SF1 16 97 7.9E-14 T 23-04-2016 CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 PRINTS PR00956 Flagellar motor switch protein FliN signature 50 63 1.1E-21 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 PRINTS PR00956 Flagellar motor switch protein FliN signature 17 33 1.1E-21 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 PRINTS PR00956 Flagellar motor switch protein FliN signature 34 50 1.1E-21 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 PRINTS PR00956 Flagellar motor switch protein FliN signature 63 78 1.1E-21 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 16 89 6.0E-25 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 17 88 4.1E-23 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 SUPERFAMILY SSF101801 15 91 1.83E-21 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 Gene3D G3DSA:2.30.330.10 15 96 1.0E-26 T 23-04-2016 CFF04554_RS01785 6d2ede86daedf942fd20c582074d4b64 101 PANTHER PTHR30034 16 97 7.9E-14 T 23-04-2016 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 440 2.2E-26 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 SUPERFAMILY SSF48557 3 441 4.24E-130 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PANTHER PTHR11444:SF2 4 436 1.4E-149 T 23-04-2016 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 Gene3D G3DSA:1.20.200.10 91 355 5.6E-88 T 23-04-2016 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 1.3E-24 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 1.3E-24 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.3E-24 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 1.3E-24 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 4.9E-8 T 23-04-2016 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 4.9E-8 T 23-04-2016 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 4.9E-8 T 23-04-2016 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 4.9E-8 T 23-04-2016 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 PANTHER PTHR11444 4 436 1.4E-149 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 Gene3D G3DSA:1.10.275.10 3 90 1.1E-32 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 SMART SM00998 349 441 3.4E-35 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 Gene3D G3DSA:1.10.40.30 356 441 1.1E-34 T 23-04-2016 CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 Pfam PF00206 Lyase 10 284 1.2E-49 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CFF04554_RS09115 6a6561f114c399d2791bb996a7f67bf7 442 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 3 441 5.7E-171 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 SUPERFAMILY SSF69765 210 368 1.03E-59 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 PANTHER PTHR32125 205 365 1.0E-42 T 23-04-2016 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 SUPERFAMILY SSF53448 5 202 1.91E-44 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 Gene3D G3DSA:3.90.550.10 4 201 2.0E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 244 259 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 2 366 37.487 T 23-04-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 Gene3D G3DSA:3.30.1330.50 209 365 3.5E-63 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 210 365 31.508 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 200 4.3E-28 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 Pfam PF02542 YgbB family 211 363 9.9E-58 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 213 363 1.6E-57 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS02050 c156b73fd1eb7ce1ce29134ddc597715 372 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 201 2.6E-54 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS05945 9ba107c633d504f874b24649ce6b774f 203 SUPERFAMILY SSF53850 2 202 7.6E-62 T 23-04-2016 CFF04554_RS05945 9ba107c633d504f874b24649ce6b774f 203 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 138 159 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CFF04554_RS05945 9ba107c633d504f874b24649ce6b774f 203 Gene3D G3DSA:3.40.190.10 2 111 6.1E-30 T 23-04-2016 CFF04554_RS05945 9ba107c633d504f874b24649ce6b774f 203 Gene3D G3DSA:3.40.190.10 112 173 5.5E-29 T 23-04-2016 CFF04554_RS05945 9ba107c633d504f874b24649ce6b774f 203 Pfam PF01634 ATP phosphoribosyltransferase 47 199 5.9E-51 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CFF04554_RS05945 9ba107c633d504f874b24649ce6b774f 203 PANTHER PTHR21403 1 203 5.4E-73 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CFF04554_RS05945 9ba107c633d504f874b24649ce6b774f 203 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 203 48.608 T 23-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CFF04554_RS05945 9ba107c633d504f874b24649ce6b774f 203 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 179 3.0E-58 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CFF04554_RS05945 9ba107c633d504f874b24649ce6b774f 203 PANTHER PTHR21403:SF3 1 203 5.4E-73 T 23-04-2016 CFF04554_RS01800 1d0431eca024c49fcb5a3ad117ec84d2 221 PANTHER PTHR30183 4 220 7.1E-59 T 23-04-2016 CFF04554_RS01800 1d0431eca024c49fcb5a3ad117ec84d2 221 SUPERFAMILY SSF161098 4 214 3.27E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS01800 1d0431eca024c49fcb5a3ad117ec84d2 221 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 8 216 1.0E-66 T 23-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CFF04554_RS01800 1d0431eca024c49fcb5a3ad117ec84d2 221 Gene3D G3DSA:1.10.3720.10 4 219 6.9E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS01800 1d0431eca024c49fcb5a3ad117ec84d2 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 218 7.4E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 Gene3D G3DSA:3.90.1210.10 283 339 1.1E-25 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 SUPERFAMILY SSF51269 279 339 7.53E-18 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 Gene3D G3DSA:3.20.20.70 4 269 4.8E-101 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 SUPERFAMILY SSF51569 4 292 2.08E-86 T 23-04-2016 CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 Pfam PF03102 NeuB family 28 270 5.9E-91 T 23-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 PANTHER PTHR23416:SF62 6 292 4.9E-98 T 23-04-2016 CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 Pfam PF08666 SAF domain 283 340 3.3E-11 T 23-04-2016 IPR013974 SAF domain CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 SMART SM00858 282 340 4.0E-9 T 23-04-2016 IPR013974 SAF domain CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 8 334 1.5E-140 T 23-04-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 CFF04554_RS07905 3e31c5593e664f40f717f9ef7a0ef416 340 PANTHER PTHR23416 6 292 4.9E-98 T 23-04-2016 CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 SUPERFAMILY SSF52440 1 127 7.19E-28 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 Gene3D G3DSA:3.30.1490.20 156 202 1.2E-14 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 Pfam PF07478 D-ala D-ala ligase C-terminus 156 304 3.1E-28 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 Gene3D G3DSA:3.40.50.20 1 117 7.4E-19 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 Gene3D G3DSA:3.30.470.20 206 308 1.9E-20 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 Gene3D G3DSA:3.30.470.20 120 144 1.9E-20 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 SUPERFAMILY SSF56059 128 307 1.86E-29 T 23-04-2016 CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 PANTHER PTHR23132 1 300 1.7E-46 T 23-04-2016 CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 2 315 1.8E-77 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 95 106 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS04055 f53b04b722cabcce0123465d4c904df4 345 Pfam PF01820 D-ala D-ala ligase N-terminus 3 117 1.1E-19 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS01635 b7e09b2c3988468336790e666d601fb3 256 Pfam PF01975 Survival protein SurE 4 192 7.2E-52 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CFF04554_RS01635 b7e09b2c3988468336790e666d601fb3 256 SUPERFAMILY SSF64167 4 256 3.4E-75 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CFF04554_RS01635 b7e09b2c3988468336790e666d601fb3 256 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 255 33.564 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CFF04554_RS01635 b7e09b2c3988468336790e666d601fb3 256 PANTHER PTHR30457 4 256 4.0E-73 T 23-04-2016 CFF04554_RS01635 b7e09b2c3988468336790e666d601fb3 256 Gene3D G3DSA:3.40.1210.10 3 255 2.7E-77 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CFF04554_RS01635 b7e09b2c3988468336790e666d601fb3 256 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 244 3.6E-69 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 Pfam PF00700 Bacterial flagellin C-terminal helical region 437 519 2.7E-25 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 Pfam PF07196 Flagellin hook IN motif 266 316 3.5E-8 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 Pfam PF07196 Flagellin hook IN motif 219 249 1.6E-5 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 PRINTS PR00207 Flagellin signature 76 95 2.6E-18 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 PRINTS PR00207 Flagellin signature 37 54 2.6E-18 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 PRINTS PR00207 Flagellin signature 111 134 2.6E-18 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 Gene3D G3DSA:1.20.1330.10 54 179 1.1E-33 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 Gene3D G3DSA:1.20.1330.10 422 476 4.3E-8 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 Gene3D G3DSA:1.20.1330.10 227 284 4.3E-8 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 SUPERFAMILY SSF64518 1 520 1.31E-84 T 23-04-2016 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 PANTHER PTHR30244 430 520 1.9E-72 T 23-04-2016 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 PANTHER PTHR30244 299 383 1.9E-72 T 23-04-2016 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 PANTHER PTHR30244 2 193 1.9E-72 T 23-04-2016 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.5E-39 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 PANTHER PTHR30244:SF1 430 520 1.9E-72 T 23-04-2016 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 PANTHER PTHR30244:SF1 299 383 1.9E-72 T 23-04-2016 CFF04554_RS08270 5c4ece8b0dbe345b6e1ff0ec3836216f 520 PANTHER PTHR30244:SF1 2 193 1.9E-72 T 23-04-2016 CFF04554_RS05120 969d1755db7c71f16293a7971dbff7f3 112 SUPERFAMILY SSF51182 11 93 2.01E-12 T 23-04-2016 IPR011051 RmlC-like cupin domain CFF04554_RS05120 969d1755db7c71f16293a7971dbff7f3 112 Gene3D G3DSA:2.60.120.10 13 94 8.9E-13 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CFF04554_RS05120 969d1755db7c71f16293a7971dbff7f3 112 Pfam PF02311 AraC-like ligand binding domain 36 88 3.5E-5 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CFF04554_RS05120 969d1755db7c71f16293a7971dbff7f3 112 PANTHER PTHR37694 12 106 1.8E-13 T 23-04-2016 CFF04554_RS06390 a57757b27f0e0edf1647f3fcb5fc155b 81 SUPERFAMILY SSF54928 2 80 4.97E-34 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 CFF04554_RS06390 a57757b27f0e0edf1647f3fcb5fc155b 81 Gene3D G3DSA:3.30.70.330 2 80 8.6E-34 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 CFF04554_RS06390 a57757b27f0e0edf1647f3fcb5fc155b 81 PANTHER PTHR24012 2 81 1.6E-32 T 23-04-2016 CFF04554_RS06390 a57757b27f0e0edf1647f3fcb5fc155b 81 SMART SM00360 2 75 1.6E-32 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 CFF04554_RS06390 a57757b27f0e0edf1647f3fcb5fc155b 81 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 1.2E-26 T 23-04-2016 IPR000504 RNA recognition motif domain GO:0003676 CFF04554_RS07150 ea4fbd374f7db11836a1adc0a5afee36 359 Gene3D G3DSA:3.40.50.2000 194 358 6.6E-43 T 23-04-2016 CFF04554_RS07150 ea4fbd374f7db11836a1adc0a5afee36 359 PANTHER PTHR30160:SF1 1 359 3.9E-50 T 23-04-2016 CFF04554_RS07150 ea4fbd374f7db11836a1adc0a5afee36 359 SUPERFAMILY SSF53756 30 358 5.65E-66 T 23-04-2016 CFF04554_RS07150 ea4fbd374f7db11836a1adc0a5afee36 359 PANTHER PTHR30160 1 359 3.9E-50 T 23-04-2016 CFF04554_RS07150 ea4fbd374f7db11836a1adc0a5afee36 359 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 168 340 4.2E-28 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CFF04554_RS07150 ea4fbd374f7db11836a1adc0a5afee36 359 Gene3D G3DSA:3.40.50.2000 37 174 7.2E-14 T 23-04-2016 CFF04554_RS02585 9f8d13f5139fa6e69b803c406fe76f25 262 PANTHER PTHR30435:SF19 1 262 2.5E-120 T 23-04-2016 CFF04554_RS02585 9f8d13f5139fa6e69b803c406fe76f25 262 PANTHER PTHR30435 1 262 2.5E-120 T 23-04-2016 CFF04554_RS02585 9f8d13f5139fa6e69b803c406fe76f25 262 SUPERFAMILY SSF117143 92 222 2.09E-37 T 23-04-2016 CFF04554_RS02585 9f8d13f5139fa6e69b803c406fe76f25 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 243 1.7E-30 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CFF04554_RS02585 9f8d13f5139fa6e69b803c406fe76f25 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 6.7E-47 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CFF04554_RS02585 9f8d13f5139fa6e69b803c406fe76f25 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.3E-114 T 23-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CFF04554_RS02585 9f8d13f5139fa6e69b803c406fe76f25 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 1.2E-27 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS02585 9f8d13f5139fa6e69b803c406fe76f25 262 Pfam PF00460 Flagella basal body rod protein 5 35 4.9E-10 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CFF04554_RS07130 8dc404e10b45a4c522cfed682ab6ee27 356 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 2 293 2.4E-55 T 23-04-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative KEGG: 00231+2.-.-.-|UniPathway: UPA00958 CFF04554_RS07130 8dc404e10b45a4c522cfed682ab6ee27 356 PANTHER PTHR30160:SF1 1 352 5.8E-68 T 23-04-2016 CFF04554_RS07130 8dc404e10b45a4c522cfed682ab6ee27 356 Gene3D G3DSA:3.40.50.2000 1 153 2.9E-32 T 23-04-2016 CFF04554_RS07130 8dc404e10b45a4c522cfed682ab6ee27 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 299 4.4E-29 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CFF04554_RS07130 8dc404e10b45a4c522cfed682ab6ee27 356 Gene3D G3DSA:3.40.50.2000 163 352 1.4E-36 T 23-04-2016 CFF04554_RS07130 8dc404e10b45a4c522cfed682ab6ee27 356 PANTHER PTHR30160 1 352 5.8E-68 T 23-04-2016 CFF04554_RS07130 8dc404e10b45a4c522cfed682ab6ee27 356 SUPERFAMILY SSF53756 1 352 7.38E-69 T 23-04-2016 CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 152 5.9E-8 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 74 110 2.7E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 SUPERFAMILY SSF51161 4 171 6.93E-52 T 23-04-2016 IPR011004 Trimeric LpxA-like CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 Gene3D G3DSA:1.10.3130.10 3 67 1.3E-16 T 23-04-2016 CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 Gene3D G3DSA:2.160.10.10 68 191 1.8E-35 T 23-04-2016 CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 PANTHER PTHR23416 1 218 1.9E-82 T 23-04-2016 CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 PANTHER PTHR23416:SF55 1 218 1.9E-82 T 23-04-2016 CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 168 3.2E-73 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 PIRSF PIRSF000441 1 224 6.2E-76 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CFF04554_RS04485 cd37990269fd2f75e8911a027c90da3d 231 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 PANTHER PTHR11772 2 373 8.5E-104 T 23-04-2016 CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 PANTHER PTHR11772 452 600 8.5E-104 T 23-04-2016 CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 Pfam PF00733 Asparagine synthase 232 595 1.0E-67 T 23-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 Gene3D G3DSA:3.40.50.620 455 595 1.1E-60 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 Gene3D G3DSA:3.40.50.620 216 367 1.1E-60 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 PIRSF PIRSF001589 1 600 1.9E-119 T 23-04-2016 CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 SUPERFAMILY SSF56235 1 215 3.0E-49 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 536 1.5E-109 T 23-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 PANTHER PTHR11772:SF10 2 373 8.5E-104 T 23-04-2016 CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 PANTHER PTHR11772:SF10 452 600 8.5E-104 T 23-04-2016 CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 Pfam PF13537 Glutamine amidotransferase domain 43 158 7.3E-40 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 Gene3D G3DSA:3.60.20.10 1 215 6.4E-61 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 SUPERFAMILY SSF52402 460 591 3.79E-56 T 23-04-2016 CFF04554_RS08145 6626f99f83150af4cbd246d73356db70 600 SUPERFAMILY SSF52402 229 371 3.79E-56 T 23-04-2016 CFF04554_RS04040 a0194474001f41927e8c7d36516976ca 188 Pfam PF01339 CheB methylesterase 6 179 1.6E-37 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CFF04554_RS04040 a0194474001f41927e8c7d36516976ca 188 SUPERFAMILY SSF52738 4 187 5.1E-39 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CFF04554_RS04040 a0194474001f41927e8c7d36516976ca 188 Gene3D G3DSA:3.40.50.180 2 187 1.4E-41 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CFF04554_RS04040 a0194474001f41927e8c7d36516976ca 188 PANTHER PTHR24421 1 167 5.9E-23 T 23-04-2016 CFF04554_RS04040 a0194474001f41927e8c7d36516976ca 188 PANTHER PTHR24421:SF16 1 167 5.9E-23 T 23-04-2016 CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 PANTHER PTHR24078 129 238 1.1E-14 T 23-04-2016 CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 Gene3D G3DSA:1.10.287.110 184 241 2.5E-15 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 SUPERFAMILY SSF46565 125 241 2.88E-20 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 Gene3D G3DSA:1.10.3680.10 12 183 3.0E-18 T 23-04-2016 IPR029024 TerB-like CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 SMART SM00271 182 245 1.9E-15 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 PRINTS PR00625 DnaJ domain signature 203 218 2.3E-9 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 PRINTS PR00625 DnaJ domain signature 185 203 2.3E-9 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 PRINTS PR00625 DnaJ domain signature 225 245 2.3E-9 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 Pfam PF00226 DnaJ domain 183 241 3.4E-14 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 Pfam PF05099 Tellurite resistance protein TerB 48 155 8.5E-9 T 23-04-2016 IPR007791 Co-chaperone DjlA, N-terminal CFF04554_RS02765 4ef8f7088f4d9a7d2cfeee517fdb5b38 246 PANTHER PTHR24078:SF255 129 238 1.1E-14 T 23-04-2016 CFF04554_RS07880 9db7588d50ec31e96396939562485c96 225 Gene3D G3DSA:3.90.550.10 4 218 1.1E-62 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS07880 9db7588d50ec31e96396939562485c96 225 Pfam PF02348 Cytidylyltransferase 5 198 6.4E-30 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CFF04554_RS07880 9db7588d50ec31e96396939562485c96 225 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 5 220 4.4E-82 T 23-04-2016 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 CFF04554_RS07880 9db7588d50ec31e96396939562485c96 225 PANTHER PTHR21485 5 216 2.6E-35 T 23-04-2016 CFF04554_RS07880 9db7588d50ec31e96396939562485c96 225 SUPERFAMILY SSF53448 4 219 1.64E-48 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS01335 c15335be8f9e49aac560e759789fa490 366 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 364 1.7E-104 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CFF04554_RS01335 c15335be8f9e49aac560e759789fa490 366 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 225 234 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CFF04554_RS01335 c15335be8f9e49aac560e759789fa490 366 Gene3D G3DSA:3.40.640.10 46 268 2.5E-55 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS01335 c15335be8f9e49aac560e759789fa490 366 PANTHER PTHR11751:SF414 17 366 5.3E-90 T 23-04-2016 CFF04554_RS01335 c15335be8f9e49aac560e759789fa490 366 SUPERFAMILY SSF53383 3 364 1.75E-63 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS01335 c15335be8f9e49aac560e759789fa490 366 PANTHER PTHR11751 17 366 5.3E-90 T 23-04-2016 CFF04554_RS01335 c15335be8f9e49aac560e759789fa490 366 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 366 54.054 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CFF04554_RS01335 c15335be8f9e49aac560e759789fa490 366 Gene3D G3DSA:3.90.1150.10 269 364 6.4E-16 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS01335 c15335be8f9e49aac560e759789fa490 366 Pfam PF00155 Aminotransferase class I and II 32 360 5.3E-42 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 PANTHER PTHR24220:SF549 3 250 3.5E-125 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 SUPERFAMILY SSF55021 231 319 6.64E-16 T 23-04-2016 CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 Gene3D G3DSA:3.40.50.300 1 231 3.7E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 SMART SM00930 245 318 1.6E-17 T 23-04-2016 IPR018449 NIL domain CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 Pfam PF09383 NIL domain 248 316 3.5E-13 T 23-04-2016 IPR018449 NIL domain CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 SUPERFAMILY SSF52540 1 234 1.27E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 Pfam PF00005 ABC transporter 18 165 6.9E-39 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 PANTHER PTHR24220 3 250 3.5E-125 T 23-04-2016 CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 Gene3D G3DSA:3.30.70.260 232 320 2.0E-14 T 23-04-2016 CFF04554_RS04820 5e9264f1eceed6c59ffe67ac92ad2801 322 SMART SM00382 26 220 6.4E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 SMART SM00419 154 200 1.3E-5 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 SUPERFAMILY SSF46785 145 200 2.88E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 Gene3D G3DSA:1.10.10.10 157 200 5.7E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 Pfam PF00027 Cyclic nucleotide-binding domain 28 111 4.4E-9 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 SMART SM00100 6 126 0.0033 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 SUPERFAMILY SSF51206 2 140 1.57E-23 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 176 191 1.9E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 160 176 1.9E-7 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 Pfam PF13545 Crp-like helix-turn-helix domain 147 200 7.3E-12 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 PANTHER PTHR24567 1 201 2.0E-34 T 23-04-2016 CFF04554_RS02140 3f38cd2decaffd7d6f58d277b247656d 201 Gene3D G3DSA:2.60.120.10 2 140 9.4E-21 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CFF04554_RS04060 762a29b015cd0f76e2adf1a7268b538e 78 SUPERFAMILY SSF143120 9 69 2.22E-8 T 23-04-2016 CFF04554_RS04060 762a29b015cd0f76e2adf1a7268b538e 78 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 72 1.9E-5 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CFF04554_RS00175 d7d11d3405ec72bf670b95dc7d49fcea 93 SUPERFAMILY SSF54189 7 88 5.04E-21 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00175 d7d11d3405ec72bf670b95dc7d49fcea 93 Gene3D G3DSA:3.30.70.330 7 89 1.5E-18 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 CFF04554_RS00175 d7d11d3405ec72bf670b95dc7d49fcea 93 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 13.167 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00175 d7d11d3405ec72bf670b95dc7d49fcea 93 Pfam PF00276 Ribosomal protein L23 8 88 1.0E-16 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS03530 817e7e3ad351c02812c48ddfdda99ac7 606 PANTHER PTHR30627:SF1 1 577 2.0E-76 T 23-04-2016 CFF04554_RS03530 817e7e3ad351c02812c48ddfdda99ac7 606 Pfam PF03717 Penicillin-binding Protein dimerisation domain 48 207 9.1E-12 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CFF04554_RS03530 817e7e3ad351c02812c48ddfdda99ac7 606 Pfam PF00905 Penicillin binding protein transpeptidase domain 268 576 1.9E-56 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CFF04554_RS03530 817e7e3ad351c02812c48ddfdda99ac7 606 SUPERFAMILY SSF56519 48 240 4.19E-18 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CFF04554_RS03530 817e7e3ad351c02812c48ddfdda99ac7 606 Gene3D G3DSA:3.90.1310.10 157 248 9.4E-12 T 23-04-2016 CFF04554_RS03530 817e7e3ad351c02812c48ddfdda99ac7 606 PANTHER PTHR30627 1 577 2.0E-76 T 23-04-2016 CFF04554_RS03530 817e7e3ad351c02812c48ddfdda99ac7 606 SUPERFAMILY SSF56601 191 583 6.47E-65 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS03530 817e7e3ad351c02812c48ddfdda99ac7 606 Gene3D G3DSA:3.40.710.10 249 581 1.8E-65 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 172 303 4.4E-25 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 Pfam PF00994 Probable molybdopterin binding domain 175 309 8.9E-18 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 SUPERFAMILY SSF63867 321 395 5.23E-6 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 Gene3D G3DSA:3.40.980.10 157 322 5.4E-45 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 PANTHER PTHR10192 1 396 2.2E-98 T 23-04-2016 CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 Gene3D G3DSA:3.90.105.10 125 156 1.6E-17 T 23-04-2016 CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 SUPERFAMILY SSF63882 1 169 1.7E-40 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 SUPERFAMILY SSF53218 171 314 2.22E-33 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 SMART SM00852 175 312 1.6E-30 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 Gene3D G3DSA:2.170.190.11 45 124 1.7E-21 T 23-04-2016 CFF04554_RS00945 f32e8c7e16f068c04106338428d9a1b9 397 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 162 9.1E-28 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 SMART SM00382 153 300 9.7E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 Gene3D G3DSA:3.40.50.2300 1 119 1.1E-26 T 23-04-2016 CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 PANTHER PTHR32071 1 380 7.9E-156 T 23-04-2016 CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 SUPERFAMILY SSF52172 1 178 2.56E-30 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 219 234 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 Pfam PF00072 Response regulator receiver domain 3 110 2.9E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 Gene3D G3DSA:1.10.8.60 306 375 3.6E-17 T 23-04-2016 CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 SUPERFAMILY SSF52540 137 374 1.04E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 157 170 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 Pfam PF00158 Sigma-54 interaction domain 135 299 2.6E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 Gene3D G3DSA:3.40.50.300 131 305 3.1E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07445 20d1fb2ed2b50a22c903193b3e4d6d18 380 SMART SM00448 1 109 1.6E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PANTHER PTHR30013 23 383 4.2E-172 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 84 228 6.8E-29 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 Gene3D G3DSA:4.10.480.10 250 334 7.9E-40 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PIRSF PIRSF000310 27 383 1.3E-141 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 Gene3D G3DSA:3.40.50.700 72 248 6.3E-54 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 SUPERFAMILY SSF56770 72 334 5.59E-89 T 23-04-2016 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 250 332 2.9E-33 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 38 61 2.9E-6 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 237 254 2.800205E-84 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 279 305 2.800205E-84 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 138 161 2.800205E-84 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 307 320 2.800205E-84 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 234 2.800205E-84 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 255 273 2.800205E-84 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 183 207 2.800205E-84 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 69 91 2.800205E-84 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 92 116 2.800205E-84 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 PANTHER PTHR30013:SF7 23 383 4.2E-172 T 23-04-2016 CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 39 56 0.0013 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFF04554_RS04700 248a91cc216e3fcd070fbd9e171c80d9 383 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 26 380 7.5E-164 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CFF04554_RS00980 7ab5e5ea6e3f53add5f7bd0220f22609 180 Pfam PF12804 MobA-like NTP transferase domain 4 133 2.1E-16 T 23-04-2016 IPR025877 MobA-like NTP transferase CFF04554_RS00980 7ab5e5ea6e3f53add5f7bd0220f22609 180 PANTHER PTHR19136:SF81 4 180 7.4E-16 T 23-04-2016 CFF04554_RS00980 7ab5e5ea6e3f53add5f7bd0220f22609 180 Gene3D G3DSA:3.90.550.10 3 178 2.7E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS00980 7ab5e5ea6e3f53add5f7bd0220f22609 180 PANTHER PTHR19136 4 180 7.4E-16 T 23-04-2016 CFF04554_RS00980 7ab5e5ea6e3f53add5f7bd0220f22609 180 SUPERFAMILY SSF53448 4 179 4.96E-20 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS06150 f6a4060c77290eba4fe4a52f516472bc 254 PIRSF PIRSF005902 1 254 4.0E-77 T 23-04-2016 IPR001130 TatD family GO:0016788 CFF04554_RS06150 f6a4060c77290eba4fe4a52f516472bc 254 PANTHER PTHR10060 1 254 4.8E-94 T 23-04-2016 IPR001130 TatD family GO:0016788 CFF04554_RS06150 f6a4060c77290eba4fe4a52f516472bc 254 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CFF04554_RS06150 f6a4060c77290eba4fe4a52f516472bc 254 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 3.0E-82 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 CFF04554_RS06150 f6a4060c77290eba4fe4a52f516472bc 254 SUPERFAMILY SSF51556 1 254 3.16E-81 T 23-04-2016 IPR032466 Metal-dependent hydrolase CFF04554_RS06150 f6a4060c77290eba4fe4a52f516472bc 254 Pfam PF01026 TatD related DNase 3 253 7.5E-72 T 23-04-2016 IPR001130 TatD family GO:0016788 CFF04554_RS06150 f6a4060c77290eba4fe4a52f516472bc 254 Gene3D G3DSA:3.20.20.140 1 254 1.3E-84 T 23-04-2016 CFF04554_RS06150 f6a4060c77290eba4fe4a52f516472bc 254 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 SMART SM00382 28 230 5.9E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 SMART SM00382 340 526 8.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 SUPERFAMILY SSF52540 316 533 1.2E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 SUPERFAMILY SSF52540 15 216 6.41E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 PANTHER PTHR24220 29 221 1.9E-115 T 23-04-2016 CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 PANTHER PTHR24220 331 431 1.9E-115 T 23-04-2016 CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 PANTHER PTHR24220 245 287 1.9E-115 T 23-04-2016 CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 Gene3D G3DSA:3.40.50.300 315 533 1.3E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 Gene3D G3DSA:3.40.50.300 1 217 4.3E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 PANTHER PTHR24220:SF546 29 221 1.9E-115 T 23-04-2016 CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 PANTHER PTHR24220:SF546 331 431 1.9E-115 T 23-04-2016 CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 PANTHER PTHR24220:SF546 245 287 1.9E-115 T 23-04-2016 CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 Pfam PF00005 ABC transporter 19 159 7.2E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 Pfam PF00005 ABC transporter 332 471 5.9E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS01295 f5cb7e5720193dc5370a0c686cc92492 551 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 SUPERFAMILY SSF52540 212 594 7.45E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 Gene3D G3DSA:3.30.450.90 202 322 1.3E-43 T 23-04-2016 CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 Pfam PF00437 Type II/IV secretion system protein 230 489 8.0E-79 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 SUPERFAMILY SSF160246 51 185 2.54E-13 T 23-04-2016 CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 PANTHER PTHR30258 40 596 6.3E-172 T 23-04-2016 CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 PANTHER PTHR30258:SF2 40 596 6.3E-172 T 23-04-2016 CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 Gene3D G3DSA:3.40.50.300 327 595 3.3E-92 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 417 431 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 91 191 8.2E-18 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CFF04554_RS05010 c6409135f2ed481de5c7226bd55d4680 597 SMART SM00382 350 471 0.0029 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 414 1.9E-153 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 Gene3D G3DSA:3.30.1490.20 118 186 3.7E-25 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 98 3.0E-32 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 324 411 2.1E-22 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 Gene3D G3DSA:3.40.50.20 2 91 1.5E-30 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 Gene3D G3DSA:3.90.600.10 324 413 1.6E-25 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 291 8.2E-77 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 414 39.106 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 SMART SM01209 99 291 7.3E-119 T 23-04-2016 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 SUPERFAMILY SSF56059 100 316 2.19E-54 T 23-04-2016 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 SUPERFAMILY SSF51246 322 414 1.57E-25 T 23-04-2016 IPR011054 Rudiment single hybrid motif CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 Gene3D G3DSA:3.30.470.20 187 320 1.1E-54 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 SMART SM01210 323 414 4.9E-37 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 PANTHER PTHR10520 1 415 1.1E-202 T 23-04-2016 CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 SUPERFAMILY SSF52440 1 99 4.75E-30 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS06490 cd31cb119e736813592cf2030eb37cc5 415 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 285 292 - T 23-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS04445 f4bdf7676f31b240147b8d1209a0074c 419 Gene3D G3DSA:3.65.10.10 221 416 4.4E-55 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CFF04554_RS04445 f4bdf7676f31b240147b8d1209a0074c 419 Gene3D G3DSA:3.65.10.10 21 219 1.2E-60 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CFF04554_RS04445 f4bdf7676f31b240147b8d1209a0074c 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.937 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS04445 f4bdf7676f31b240147b8d1209a0074c 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 1.8E-172 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS04445 f4bdf7676f31b240147b8d1209a0074c 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 406 8.1E-97 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CFF04554_RS04445 f4bdf7676f31b240147b8d1209a0074c 419 PANTHER PTHR21090 1 419 7.9E-172 T 23-04-2016 CFF04554_RS04445 f4bdf7676f31b240147b8d1209a0074c 419 SUPERFAMILY SSF55205 1 418 1.59E-130 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 SUPERFAMILY SSF52540 298 520 1.24E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 Gene3D G3DSA:3.40.50.300 133 279 1.8E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 Gene3D G3DSA:3.40.50.300 2 101 1.8E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 PANTHER PTHR19211 1 521 9.1E-237 T 23-04-2016 CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 SUPERFAMILY SSF52540 2 237 4.22E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 PANTHER PTHR19211:SF38 1 521 9.1E-237 T 23-04-2016 CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 Pfam PF12848 ABC transporter 223 305 3.2E-16 T 23-04-2016 IPR032781 ABC-transporter extension domain CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 Gene3D G3DSA:3.40.50.300 316 521 2.1E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 Pfam PF00005 ABC transporter 18 183 8.3E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 Pfam PF00005 ABC transporter 334 464 1.7E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 SMART SM00382 26 227 2.1E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02070 a82029557643998f875deede2dda4bcf 527 SMART SM00382 343 508 4.0E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS04635 1da51c863bd4fc54784891d170a636e1 331 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 132 328 4.9E-41 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CFF04554_RS04635 1da51c863bd4fc54784891d170a636e1 331 PANTHER PTHR30518 1 329 1.4E-42 T 23-04-2016 CFF04554_RS04635 1da51c863bd4fc54784891d170a636e1 331 Pfam PF02618 YceG-like family 61 328 4.5E-56 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CFF04554_RS04635 1da51c863bd4fc54784891d170a636e1 331 Gene3D G3DSA:3.30.160.60 301 328 1.2E-4 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 CFF04554_RS04635 1da51c863bd4fc54784891d170a636e1 331 PANTHER PTHR30518:SF2 1 329 1.4E-42 T 23-04-2016 CFF04554_RS04825 a6fb493ad2a861f67377a1b3880b8e07 213 SUPERFAMILY SSF161098 5 199 2.62E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS04825 a6fb493ad2a861f67377a1b3880b8e07 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 210 8.5E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS04825 a6fb493ad2a861f67377a1b3880b8e07 213 Gene3D G3DSA:1.10.3720.10 6 211 7.6E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS04825 a6fb493ad2a861f67377a1b3880b8e07 213 PANTHER PTHR30450:SF1 5 213 1.6E-106 T 23-04-2016 CFF04554_RS04825 a6fb493ad2a861f67377a1b3880b8e07 213 PANTHER PTHR30450 5 213 1.6E-106 T 23-04-2016 CFF04554_RS05830 f26b20b6249c7041f164b92fb77b8049 270 SUPERFAMILY SSF109604 3 267 6.28E-47 T 23-04-2016 CFF04554_RS05830 f26b20b6249c7041f164b92fb77b8049 270 Pfam PF08668 HDOD domain 12 212 8.2E-33 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CFF04554_RS05830 f26b20b6249c7041f164b92fb77b8049 270 PANTHER PTHR33525 3 269 6.2E-28 T 23-04-2016 CFF04554_RS05830 f26b20b6249c7041f164b92fb77b8049 270 Gene3D G3DSA:1.10.3150.10 3 269 5.6E-53 T 23-04-2016 IPR013976 Metal-dependent hydrolase HDOD CFF04554_RS05830 f26b20b6249c7041f164b92fb77b8049 270 PANTHER PTHR33525:SF3 3 269 6.2E-28 T 23-04-2016 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 Pfam PF00708 Acylphosphatase 2 86 5.0E-18 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 PIRSF PIRSF006256 1 737 5.5E-249 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 PANTHER PTHR10029 1 737 5.0E-270 T 23-04-2016 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 6 726 1.2E-215 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 23-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 SUPERFAMILY SSF55821 171 385 2.35E-44 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 Pfam PF07503 HypF finger 104 137 1.5E-16 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 Pfam PF07503 HypF finger 154 186 6.4E-16 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 Gene3D G3DSA:3.90.870.10 196 366 8.2E-49 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 Gene3D G3DSA:2.10.110.10 104 185 1.5E-4 T 23-04-2016 IPR001781 Zinc finger, LIM-type GO:0008270 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 PANTHER PTHR10029:SF4 1 737 5.0E-270 T 23-04-2016 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 SUPERFAMILY SSF54975 3 87 1.09E-21 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 Gene3D G3DSA:3.30.70.100 2 86 1.1E-21 T 23-04-2016 CFF04554_RS04675 d0b71869fcfade6b95d0ec6471932ddb 741 Pfam PF01300 Telomere recombination 208 378 1.3E-48 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 CFF04554_RS04925 d606cc09a5d67c798f6a8c4b747aa366 124 Pfam PF01152 Bacterial-like globin 8 113 2.2E-5 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 CFF04554_RS04925 d606cc09a5d67c798f6a8c4b747aa366 124 Gene3D G3DSA:1.10.490.10 7 117 1.9E-17 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CFF04554_RS04925 d606cc09a5d67c798f6a8c4b747aa366 124 SUPERFAMILY SSF46458 6 117 2.4E-23 T 23-04-2016 IPR009050 Globin-like CFF04554_RS00565 b3c212b64a49df149a794236a8f3869a 232 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 225 38.85 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CFF04554_RS00565 b3c212b64a49df149a794236a8f3869a 232 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 218 1.7E-80 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CFF04554_RS00565 b3c212b64a49df149a794236a8f3869a 232 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 63 72 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 CFF04554_RS00565 b3c212b64a49df149a794236a8f3869a 232 Pfam PF03167 Uracil DNA glycosylase superfamily 60 213 2.5E-20 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS00565 b3c212b64a49df149a794236a8f3869a 232 PANTHER PTHR11264 1 232 5.0E-119 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CFF04554_RS00565 b3c212b64a49df149a794236a8f3869a 232 SMART SM00987 55 214 6.4E-31 T 23-04-2016 CFF04554_RS00565 b3c212b64a49df149a794236a8f3869a 232 Gene3D G3DSA:3.40.470.10 4 226 1.5E-92 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS00565 b3c212b64a49df149a794236a8f3869a 232 SUPERFAMILY SSF52141 8 225 2.18E-87 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS00565 b3c212b64a49df149a794236a8f3869a 232 SMART SM00986 55 214 6.4E-31 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS03715 ddca359a7ecb0ae6ba707b249cdc1a7a 221 PANTHER PTHR10359:SF17 23 206 2.1E-39 T 23-04-2016 CFF04554_RS03715 ddca359a7ecb0ae6ba707b249cdc1a7a 221 Gene3D G3DSA:1.10.340.30 24 124 6.7E-32 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CFF04554_RS03715 ddca359a7ecb0ae6ba707b249cdc1a7a 221 Gene3D G3DSA:1.10.1670.10 125 206 8.5E-30 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CFF04554_RS03715 ddca359a7ecb0ae6ba707b249cdc1a7a 221 PIRSF PIRSF001435 12 210 1.9E-40 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CFF04554_RS03715 ddca359a7ecb0ae6ba707b249cdc1a7a 221 SMART SM00478 39 202 1.9E-16 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CFF04554_RS03715 ddca359a7ecb0ae6ba707b249cdc1a7a 221 PANTHER PTHR10359 23 206 2.1E-39 T 23-04-2016 CFF04554_RS03715 ddca359a7ecb0ae6ba707b249cdc1a7a 221 SUPERFAMILY SSF48150 18 204 3.77E-40 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CFF04554_RS03715 ddca359a7ecb0ae6ba707b249cdc1a7a 221 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 157 3.0E-14 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 PIRSF PIRSF001604 1 645 2.6E-212 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 SUPERFAMILY SSF47781 392 554 4.89E-44 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 SUPERFAMILY SSF52113 570 640 2.99E-18 T 23-04-2016 IPR001357 BRCT domain CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Gene3D G3DSA:3.40.50.10190 572 641 1.3E-22 T 23-04-2016 IPR001357 BRCT domain CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 PANTHER PTHR23389 10 518 1.1E-137 T 23-04-2016 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 310 386 9.5E-26 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Gene3D G3DSA:1.10.150.20 421 488 5.3E-23 T 23-04-2016 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 640 8.0E-205 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 SMART SM00532 1 433 3.7E-193 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 PANTHER PTHR23389:SF9 10 518 1.1E-137 T 23-04-2016 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 SMART SM00292 572 645 7.8E-8 T 23-04-2016 IPR001357 BRCT domain CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Gene3D G3DSA:1.10.287.610 9 65 1.4E-15 T 23-04-2016 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Pfam PF12826 Helix-hairpin-helix motif 496 548 3.8E-8 T 23-04-2016 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Hamap MF_01588 DNA ligase [ligA]. 3 645 44.167 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Gene3D G3DSA:3.30.470.30 113 239 2.9E-46 T 23-04-2016 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 305 4.6E-95 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 108 137 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 SUPERFAMILY SSF50249 306 387 2.57E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 572 639 2.1E-9 T 23-04-2016 IPR001357 BRCT domain CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Gene3D G3DSA:2.40.50.140 308 378 5.3E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 SUPERFAMILY SSF56091 7 304 1.15E-96 T 23-04-2016 CFF04554_RS05750 e757086380c6a29f054db5fda629ffdc 645 Gene3D G3DSA:1.10.150.20 489 559 5.1E-12 T 23-04-2016 CFF04554_RS04030 abe39b71c5951da0192cde0fca8f6300 397 Pfam PF07690 Major Facilitator Superfamily 21 353 1.0E-22 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CFF04554_RS04030 abe39b71c5951da0192cde0fca8f6300 397 Gene3D G3DSA:1.20.1250.20 12 193 7.3E-14 T 23-04-2016 CFF04554_RS04030 abe39b71c5951da0192cde0fca8f6300 397 Gene3D G3DSA:1.20.1250.20 220 393 4.5E-8 T 23-04-2016 CFF04554_RS04030 abe39b71c5951da0192cde0fca8f6300 397 PANTHER PTHR23513 1 397 4.9E-35 T 23-04-2016 CFF04554_RS04030 abe39b71c5951da0192cde0fca8f6300 397 SUPERFAMILY SSF103473 12 393 4.05E-32 T 23-04-2016 IPR020846 Major facilitator superfamily domain CFF04554_RS02350 3825e2042872eba50f2e221c95f78f1d 357 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 96 352 1.0E-76 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CFF04554_RS02350 3825e2042872eba50f2e221c95f78f1d 357 PANTHER PTHR30188:SF3 96 355 4.6E-98 T 23-04-2016 CFF04554_RS02350 3825e2042872eba50f2e221c95f78f1d 357 PANTHER PTHR30188 96 355 4.6E-98 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CFF04554_RS02350 3825e2042872eba50f2e221c95f78f1d 357 Pfam PF02405 Permease MlaE 142 350 2.3E-70 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 Gene3D G3DSA:1.20.58.100 445 552 2.7E-36 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 Gene3D G3DSA:3.50.50.60 370 436 5.3E-91 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 Gene3D G3DSA:3.50.50.60 3 257 5.3E-91 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 Gene3D G3DSA:4.10.80.40 553 587 7.0E-12 T 23-04-2016 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 PANTHER PTHR11632:SF5 1 114 7.0E-246 T 23-04-2016 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 PANTHER PTHR11632:SF5 136 594 7.0E-246 T 23-04-2016 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 41 50 - T 23-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 SUPERFAMILY SSF56425 251 374 6.13E-36 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 PANTHER PTHR11632 1 114 7.0E-246 T 23-04-2016 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 PANTHER PTHR11632 136 594 7.0E-246 T 23-04-2016 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 Pfam PF00890 FAD binding domain 7 415 5.6E-124 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 601 9.1E-227 T 23-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 SUPERFAMILY SSF46977 463 657 8.9E-62 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 Pfam PF02910 Fumarate reductase flavoprotein C-term 473 601 4.0E-39 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 SUPERFAMILY SSF51905 4 274 1.54E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 SUPERFAMILY SSF51905 378 440 1.54E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 Gene3D G3DSA:3.90.700.10 258 360 6.8E-35 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CFF04554_RS02080 e19045a7c483581dc8deaca6eac1060c 662 PIRSF PIRSF000171 1 593 1.1E-33 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit CFF04554_RS01380 5eabf9c5f5dfc2d45af7beb5dc70ac6f 315 SUPERFAMILY SSF51679 1 315 9.42E-46 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CFF04554_RS01380 5eabf9c5f5dfc2d45af7beb5dc70ac6f 315 PANTHER PTHR30137 20 315 5.9E-31 T 23-04-2016 CFF04554_RS01380 5eabf9c5f5dfc2d45af7beb5dc70ac6f 315 Pfam PF00296 Luciferase-like monooxygenase 1 280 1.3E-25 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CFF04554_RS01380 5eabf9c5f5dfc2d45af7beb5dc70ac6f 315 Gene3D G3DSA:3.20.20.30 1 315 2.7E-48 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 Gene3D G3DSA:3.30.420.40 4 83 1.6E-17 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 Gene3D G3DSA:3.30.420.40 158 209 1.6E-17 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 SUPERFAMILY SSF53067 5 198 2.65E-45 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 Pfam PF14450 Cell division protein FtsA 208 374 3.8E-14 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 5 378 5.3E-117 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 PANTHER PTHR32432 5 488 1.8E-87 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 4.4E-24 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 494 25.775 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 Gene3D G3DSA:3.30.1490.110 97 157 9.6E-15 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 Gene3D G3DSA:3.90.640.10 236 296 3.7E-7 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 PANTHER PTHR32432:SF4 5 488 1.8E-87 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 SUPERFAMILY SSF53067 200 378 6.74E-30 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 SMART SM00842 5 197 1.1E-78 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 Gene3D G3DSA:3.30.420.40 297 351 1.5E-19 T 23-04-2016 CFF04554_RS02830 b13151f1788309d85369679e1624dd4a 494 Gene3D G3DSA:3.30.420.40 210 235 1.5E-19 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 Gene3D G3DSA:2.40.40.20 427 497 7.2E-38 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 Gene3D G3DSA:2.40.40.20 359 386 7.2E-38 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 Gene3D G3DSA:2.40.50.100 1288 1344 1.7E-7 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 352 6.5E-83 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 Pfam PF04998 RNA polymerase Rpb1, domain 5 756 1404 3.7E-68 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 SMART SM00663 245 524 8.1E-174 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 16 1508 10.557 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 753 1.1E-17 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 SUPERFAMILY SSF64484 16 934 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 SUPERFAMILY SSF64484 1266 1497 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 22 1499 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 Pfam PF04983 RNA polymerase Rpb1, domain 3 499 645 1.3E-30 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376:SF32 1435 1497 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376:SF32 1218 1290 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376:SF32 1309 1394 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376:SF32 8 933 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376:SF32 991 1189 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376 1435 1497 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376 1218 1290 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376 1309 1394 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376 8 933 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 PANTHER PTHR19376 991 1189 0.0 T 23-04-2016 CFF04554_RS06720 8bf88f0e66b91bc133f6fd98e9382d86 1508 Pfam PF00623 RNA polymerase Rpb1, domain 2 354 495 2.2E-35 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS07380 628242abb1c338fda8c1a2b75cdd5737 341 SUPERFAMILY SSF46626 218 325 4.72E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07380 628242abb1c338fda8c1a2b75cdd5737 341 Gene3D G3DSA:1.10.760.10 99 221 1.1E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07380 628242abb1c338fda8c1a2b75cdd5737 341 Gene3D G3DSA:1.10.760.10 8 24 1.1E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07380 628242abb1c338fda8c1a2b75cdd5737 341 Gene3D G3DSA:1.10.760.10 222 302 8.9E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07380 628242abb1c338fda8c1a2b75cdd5737 341 Gene3D G3DSA:1.20.5.100 309 341 6.8E-8 T 23-04-2016 CFF04554_RS07380 628242abb1c338fda8c1a2b75cdd5737 341 SUPERFAMILY SSF46626 85 210 6.77E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07380 628242abb1c338fda8c1a2b75cdd5737 341 Pfam PF00034 Cytochrome c 105 209 1.7E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 Gene3D G3DSA:3.20.20.70 2 287 1.2E-65 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 303 1.1E-29 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 SMART SM00729 11 212 3.4E-9 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 SUPERFAMILY SSF102114 2 270 1.57E-66 T 23-04-2016 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 322 2.1E-104 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 Pfam PF13353 4Fe-4S single cluster domain 18 121 8.4E-9 T 23-04-2016 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 2 322 36.796 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 Pfam PF04055 Radical SAM superfamily 15 175 9.5E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS01100 8b899fb19dcd74cb408be45a2a3f1b62 322 PANTHER PTHR22960 1 272 3.7E-100 T 23-04-2016 CFF04554_RS02270 eb14972ca073a4cfa236888a17454cc4 168 Pfam PF09626 Dihaem cytochrome c 32 153 1.7E-39 T 23-04-2016 IPR018588 Dihaem cytochrome c CFF04554_RS02270 eb14972ca073a4cfa236888a17454cc4 168 Gene3D G3DSA:1.10.3820.10 113 151 0.001 T 23-04-2016 CFF04554_RS02270 eb14972ca073a4cfa236888a17454cc4 168 Gene3D G3DSA:1.10.3820.10 29 67 0.001 T 23-04-2016 CFF04554_RS02270 eb14972ca073a4cfa236888a17454cc4 168 SUPERFAMILY SSF46626 30 88 9.26E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS08940 5e3744e6bc420dfd7edc2a416740f8a5 172 PANTHER PTHR10681:SF81 3 167 4.1E-43 T 23-04-2016 CFF04554_RS08940 5e3744e6bc420dfd7edc2a416740f8a5 172 Gene3D G3DSA:3.40.30.10 2 166 3.4E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS08940 5e3744e6bc420dfd7edc2a416740f8a5 172 SUPERFAMILY SSF52833 1 162 1.07E-40 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS08940 5e3744e6bc420dfd7edc2a416740f8a5 172 PANTHER PTHR10681 3 167 4.1E-43 T 23-04-2016 CFF04554_RS08940 5e3744e6bc420dfd7edc2a416740f8a5 172 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CFF04554_RS08940 5e3744e6bc420dfd7edc2a416740f8a5 172 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 36.383 T 23-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CFF04554_RS08940 5e3744e6bc420dfd7edc2a416740f8a5 172 Pfam PF08534 Redoxin 20 162 2.6E-22 T 23-04-2016 IPR013740 Redoxin GO:0016491 CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 Gene3D G3DSA:2.60.260.20 130 193 1.5E-9 T 23-04-2016 CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 Gene3D G3DSA:2.60.260.20 197 274 6.8E-19 T 23-04-2016 CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 SUPERFAMILY SSF49493 199 278 1.57E-18 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 Pfam PF00226 DnaJ domain 5 65 5.7E-28 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 SUPERFAMILY SSF46565 4 105 4.06E-34 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 SMART SM00271 3 60 7.0E-31 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 PANTHER PTHR24078 1 288 4.2E-75 T 23-04-2016 CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 SUPERFAMILY SSF49493 128 197 2.75E-10 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 Pfam PF01556 DnaJ C terminal domain 132 273 1.1E-34 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 Gene3D G3DSA:1.10.287.110 2 101 8.0E-35 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 PANTHER PTHR24078:SF190 1 288 4.2E-75 T 23-04-2016 CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 PRINTS PR00625 DnaJ domain signature 6 24 5.4E-28 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 PRINTS PR00625 DnaJ domain signature 60 79 5.4E-28 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 PRINTS PR00625 DnaJ domain signature 24 39 5.4E-28 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 PRINTS PR00625 DnaJ domain signature 40 60 5.4E-28 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03840 1799c50cdd29d1c21162df0856f2e0bc 290 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 23-04-2016 IPR018253 DnaJ domain, conserved site CFF04554_RS00615 50b66c9dbce2b8162dae88e2e8d8dfc8 70 Pfam PF01165 Ribosomal protein S21 4 56 2.5E-15 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00615 50b66c9dbce2b8162dae88e2e8d8dfc8 70 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00615 50b66c9dbce2b8162dae88e2e8d8dfc8 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 54 1.0E-14 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00615 50b66c9dbce2b8162dae88e2e8d8dfc8 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-19 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00615 50b66c9dbce2b8162dae88e2e8d8dfc8 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 5.6E-8 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00615 50b66c9dbce2b8162dae88e2e8d8dfc8 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 5.6E-8 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00615 50b66c9dbce2b8162dae88e2e8d8dfc8 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 5.6E-8 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00615 50b66c9dbce2b8162dae88e2e8d8dfc8 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 5.6E-8 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00615 50b66c9dbce2b8162dae88e2e8d8dfc8 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 14.861 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 SMART SM00382 357 527 3.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 SMART SM00382 28 235 1.4E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 Pfam PF00005 ABC transporter 19 188 6.9E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 Pfam PF00005 ABC transporter 349 482 2.4E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 Pfam PF16326 ABC transporter C-terminal domain 572 636 9.5E-12 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 Pfam PF12848 ABC transporter 227 298 4.7E-8 T 23-04-2016 IPR032781 ABC-transporter extension domain CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 PANTHER PTHR19211 1 587 1.2E-158 T 23-04-2016 CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 SUPERFAMILY SSF52540 328 530 5.9E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 Gene3D G3DSA:3.40.50.300 334 565 7.4E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 Gene3D G3DSA:3.40.50.300 122 273 1.6E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 Gene3D G3DSA:3.40.50.300 2 90 1.6E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02670 4cdc7c43fd34674cf89d4595ba0fbaa2 644 SUPERFAMILY SSF52540 6 239 9.42E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS09125 4115adb72d159a3a698188aa0b2625e9 489 Pfam PF00324 Amino acid permease 17 473 1.2E-132 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CFF04554_RS09125 4115adb72d159a3a698188aa0b2625e9 489 PIRSF PIRSF006060 2 489 9.3E-81 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CFF04554_RS09125 4115adb72d159a3a698188aa0b2625e9 489 PANTHER PTHR11785:SF204 6 476 5.0E-190 T 23-04-2016 CFF04554_RS09125 4115adb72d159a3a698188aa0b2625e9 489 ProSitePatterns PS00218 Amino acid permeases signature. 42 73 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CFF04554_RS09125 4115adb72d159a3a698188aa0b2625e9 489 PANTHER PTHR11785 6 476 5.0E-190 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CFF04554_RS02555 908dd38f23f4b3b1ecfd171f179d12a6 290 SUPERFAMILY SSF53686 15 283 6.55E-36 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS02555 908dd38f23f4b3b1ecfd171f179d12a6 290 Gene3D G3DSA:3.40.50.1100 33 110 5.8E-10 T 23-04-2016 CFF04554_RS02555 908dd38f23f4b3b1ecfd171f179d12a6 290 Gene3D G3DSA:3.40.50.1100 126 283 2.2E-9 T 23-04-2016 CFF04554_RS02555 908dd38f23f4b3b1ecfd171f179d12a6 290 PIRSF PIRSF006278 8 286 4.1E-18 T 23-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CFF04554_RS04410 de80073a8bde25508083fdf9d774f8e1 159 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 84 2.8E-12 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CFF04554_RS04410 de80073a8bde25508083fdf9d774f8e1 159 SUPERFAMILY SSF53254 2 140 2.63E-27 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CFF04554_RS04410 de80073a8bde25508083fdf9d774f8e1 159 Gene3D G3DSA:3.40.50.1240 2 158 1.4E-42 T 23-04-2016 IPR029033 Histidine phosphatase superfamily CFF04554_RS04410 de80073a8bde25508083fdf9d774f8e1 159 SMART SM00855 3 114 0.0026 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CFF04554_RS04410 de80073a8bde25508083fdf9d774f8e1 159 PANTHER PTHR20935 4 83 6.2E-14 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 Pfam PF00117 Glutamine amidotransferase class-I 8 186 1.2E-43 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PANTHER PTHR11922:SF2 1 507 1.8E-274 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 6.7E-6 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 6.7E-6 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 6.7E-6 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PRINTS PR00097 Anthranilate synthase component II signature 50 59 2.6E-5 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PRINTS PR00097 Anthranilate synthase component II signature 165 178 2.6E-5 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PRINTS PR00097 Anthranilate synthase component II signature 77 88 2.6E-5 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 192 8.2E-77 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 Gene3D G3DSA:3.40.50.620 195 384 1.9E-56 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 510 53.681 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 200 510 4.1E-149 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 Pfam PF02540 NAD synthase 210 387 3.6E-6 T 23-04-2016 IPR022310 NAD/GMP synthase CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 3.1E-7 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 3.1E-7 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 3.1E-7 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 SUPERFAMILY SSF54810 390 510 1.7E-48 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 SUPERFAMILY SSF52402 187 403 1.43E-53 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 PANTHER PTHR11922 1 507 1.8E-274 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 Gene3D G3DSA:3.40.50.880 5 191 1.5E-64 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 Gene3D G3DSA:3.30.300.10 386 510 4.0E-50 T 23-04-2016 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 Pfam PF00958 GMP synthase C terminal domain 418 509 3.4E-42 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CFF04554_RS06505 b91b2d61bcb33df8e5ec762cfb7b3b28 510 SUPERFAMILY SSF52317 6 189 1.28E-53 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 SUPERFAMILY SSF52021 1 146 3.92E-47 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 3.8E-11 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 3.8E-11 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 3.8E-11 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PANTHER PTHR11405 184 370 7.9E-141 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PANTHER PTHR11405 1 167 7.9E-141 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 Pfam PF00117 Glutamine amidotransferase class-I 191 370 7.2E-40 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 371 4.0E-131 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 SUPERFAMILY SSF52317 165 371 7.18E-53 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00097 Anthranilate synthase component II signature 263 274 2.3E-6 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00097 Anthranilate synthase component II signature 347 360 2.3E-6 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00097 Anthranilate synthase component II signature 235 244 2.3E-6 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 Gene3D G3DSA:3.40.50.880 151 371 1.5E-62 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 SMART SM01097 1 131 1.9E-65 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 1.2E-31 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 1.2E-31 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 1.2E-31 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 1.2E-31 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 189 203 1.2E-31 T 23-04-2016 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 2 129 1.8E-41 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 372 41.335 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS01875 a5a8b2cdfd9f064d78df733ec6bd31c0 372 Gene3D G3DSA:3.50.30.20 1 146 6.2E-47 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CFF04554_RS06730 1fc05c39e4e9bee5c46f7c911479fcc3 124 SUPERFAMILY SSF48300 3 60 8.24E-16 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06730 1fc05c39e4e9bee5c46f7c911479fcc3 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 1.1E-48 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06730 1fc05c39e4e9bee5c46f7c911479fcc3 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 103 3.0E-15 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CFF04554_RS06730 1fc05c39e4e9bee5c46f7c911479fcc3 124 SUPERFAMILY SSF54736 53 124 2.44E-25 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CFF04554_RS06730 1fc05c39e4e9bee5c46f7c911479fcc3 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 7.9E-20 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06730 1fc05c39e4e9bee5c46f7c911479fcc3 124 Gene3D G3DSA:1.20.5.710 2 51 5.6E-21 T 23-04-2016 CFF04554_RS06730 1fc05c39e4e9bee5c46f7c911479fcc3 124 Gene3D G3DSA:3.30.1390.10 52 124 3.3E-33 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CFF04554_RS06730 1fc05c39e4e9bee5c46f7c911479fcc3 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 7.5E-30 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CFF04554_RS06730 1fc05c39e4e9bee5c46f7c911479fcc3 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 25.379 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 SUPERFAMILY SSF55073 391 512 4.16E-7 T 23-04-2016 IPR029787 Nucleotide cyclase CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 PANTHER PTHR33121 505 792 1.4E-28 T 23-04-2016 CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 PANTHER PTHR33121 17 31 1.4E-28 T 23-04-2016 CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 SMART SM00267 375 541 2.3E-4 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 261 374 3.0E-13 T 23-04-2016 IPR000014 PAS domain CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 Pfam PF00990 Diguanylate cyclase, GGDEF domain 386 521 1.1E-6 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 PANTHER PTHR33121:SF10 505 792 1.4E-28 T 23-04-2016 CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 PANTHER PTHR33121:SF10 17 31 1.4E-28 T 23-04-2016 CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 Pfam PF00563 EAL domain 559 791 6.4E-50 T 23-04-2016 IPR001633 EAL domain CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 SMART SM00052 553 796 3.5E-38 T 23-04-2016 IPR001633 EAL domain CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 Gene3D G3DSA:3.20.20.450 559 797 2.0E-55 T 23-04-2016 IPR001633 EAL domain CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 Gene3D G3DSA:3.30.450.20 268 367 2.8E-12 T 23-04-2016 CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 Gene3D G3DSA:3.30.70.270 388 517 1.9E-6 T 23-04-2016 CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 SMART SM00091 256 322 0.0016 T 23-04-2016 IPR000014 PAS domain CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 SUPERFAMILY SSF55785 264 365 3.66E-12 T 23-04-2016 IPR000014 PAS domain CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 SUPERFAMILY SSF141868 560 794 2.48E-54 T 23-04-2016 IPR001633 EAL domain CFF04554_RS08740 0f26fcccc2cf8db1944c14af3830779a 798 Pfam PF13426 PAS domain 269 367 1.1E-10 T 23-04-2016 IPR000014 PAS domain CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 PANTHER PTHR24093:SF50 30 682 1.5E-110 T 23-04-2016 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 Gene3D G3DSA:3.40.1110.10 396 508 1.7E-14 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 Gene3D G3DSA:3.40.50.1000 509 649 1.3E-39 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 Gene3D G3DSA:3.40.50.1000 356 395 1.3E-39 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 Pfam PF00122 E1-E2 ATPase 160 371 1.0E-43 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 136 682 7.5E-142 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 382 388 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 SUPERFAMILY SSF81653 200 287 3.01E-20 T 23-04-2016 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 539 1.3E-22 T 23-04-2016 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 617 1.3E-22 T 23-04-2016 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 380 394 1.3E-22 T 23-04-2016 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 582 601 1.3E-22 T 23-04-2016 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 517 1.3E-22 T 23-04-2016 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 238 252 1.3E-22 T 23-04-2016 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 Gene3D G3DSA:2.70.150.10 179 288 1.1E-21 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 SUPERFAMILY SSF56784 378 398 1.24E-42 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 SUPERFAMILY SSF56784 438 682 1.24E-42 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 160 658 5.1E-75 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 PANTHER PTHR24093 30 682 1.5E-110 T 23-04-2016 CFF04554_RS04170 08be40ec14e771f23cbca65e5dec0b83 691 Pfam PF00702 haloacid dehalogenase-like hydrolase 377 593 3.6E-30 T 23-04-2016 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 SUPERFAMILY SSF54826 4 137 1.4E-49 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 PRINTS PR00148 Enolase signature 106 122 4.5E-42 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 PRINTS PR00148 Enolase signature 37 51 4.5E-42 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 PRINTS PR00148 Enolase signature 360 377 4.5E-42 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 PRINTS PR00148 Enolase signature 160 173 4.5E-42 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 PRINTS PR00148 Enolase signature 331 345 4.5E-42 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 PRINTS PR00148 Enolase signature 308 319 4.5E-42 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 ProSitePatterns PS00164 Enolase signature. 331 344 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 SMART SM01193 4 133 6.8E-81 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 Hamap MF_00318 Enolase [eno]. 2 408 43.21 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 Gene3D G3DSA:3.20.20.120 127 408 3.9E-127 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 Gene3D G3DSA:3.30.390.10 4 125 1.4E-47 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 408 4.0E-198 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 PANTHER PTHR11902 1 405 3.6E-227 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 PIRSF PIRSF001400 1 414 1.3E-183 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 408 4.9E-117 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 SUPERFAMILY SSF51604 137 408 1.02E-119 T 23-04-2016 IPR029065 Enolase C-terminal domain-like CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 Pfam PF03952 Enolase, N-terminal domain 4 133 3.6E-53 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS01000 273ed3af0292f75e97a20d18685e60cd 416 SMART SM01192 138 416 5.5E-198 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 SUPERFAMILY SSF54211 5 139 1.32E-39 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 728 26.49 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Gene3D G3DSA:1.10.10.400 261 343 3.1E-18 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 275 348 1.4E-10 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Pfam PF01138 3' exoribonuclease family, domain 1 353 484 7.3E-18 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Pfam PF01138 3' exoribonuclease family, domain 1 19 139 8.7E-15 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 PIRSF PIRSF005499 1 728 2.0E-259 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Pfam PF00575 S1 RNA binding domain 667 720 3.7E-7 T 23-04-2016 IPR003029 S1 domain GO:0003676 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 SMART SM00316 667 728 4.1E-14 T 23-04-2016 IPR022967 RNA-binding domain, S1 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 SUPERFAMILY SSF55666 141 260 7.31E-22 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 SUPERFAMILY SSF50249 660 726 3.95E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 PANTHER PTHR11252:SF0 663 725 2.4E-250 T 23-04-2016 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 PANTHER PTHR11252:SF0 220 645 2.4E-250 T 23-04-2016 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 PANTHER PTHR11252:SF0 4 183 2.4E-250 T 23-04-2016 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 SUPERFAMILY SSF54211 321 516 4.71E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Pfam PF03725 3' exoribonuclease family, domain 2 143 237 8.4E-15 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Pfam PF03725 3' exoribonuclease family, domain 2 489 558 5.1E-7 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Gene3D G3DSA:3.30.1370.10 581 649 9.3E-17 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 SUPERFAMILY SSF55666 479 572 9.82E-24 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 PANTHER PTHR11252 663 725 2.4E-250 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 PANTHER PTHR11252 220 645 2.4E-250 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 PANTHER PTHR11252 4 183 2.4E-250 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Pfam PF00013 KH domain 586 642 4.5E-10 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 SMART SM00322 580 646 1.3E-7 T 23-04-2016 IPR004087 K Homology domain GO:0003676 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 SUPERFAMILY SSF54791 584 652 2.48E-14 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Gene3D G3DSA:2.40.50.140 665 727 2.0E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Gene3D G3DSA:3.30.230.70 344 569 1.3E-74 T 23-04-2016 IPR027408 PNPase/RNase PH domain CFF04554_RS06470 13f877812166dc827913c87adec1b144 728 Gene3D G3DSA:3.30.230.70 5 251 6.4E-71 T 23-04-2016 IPR027408 PNPase/RNase PH domain CFF04554_RS03845 977eb0166c2dcaeed29dd442753a4ca1 123 SMART SM00422 9 78 4.7E-26 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CFF04554_RS03845 977eb0166c2dcaeed29dd442753a4ca1 123 ProSitePatterns PS00552 MerR-type HTH domain signature. 12 34 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CFF04554_RS03845 977eb0166c2dcaeed29dd442753a4ca1 123 SUPERFAMILY SSF46955 9 99 5.04E-20 T 23-04-2016 IPR009061 Putative DNA-binding domain CFF04554_RS03845 977eb0166c2dcaeed29dd442753a4ca1 123 Pfam PF13411 MerR HTH family regulatory protein 9 76 1.5E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CFF04554_RS03845 977eb0166c2dcaeed29dd442753a4ca1 123 PANTHER PTHR30204 1 90 1.4E-28 T 23-04-2016 CFF04554_RS03845 977eb0166c2dcaeed29dd442753a4ca1 123 PANTHER PTHR30204:SF8 1 90 1.4E-28 T 23-04-2016 CFF04554_RS03845 977eb0166c2dcaeed29dd442753a4ca1 123 Gene3D G3DSA:1.10.1660.10 9 96 2.6E-21 T 23-04-2016 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 PRINTS PR00773 GrpE protein signature 125 140 8.1E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 PRINTS PR00773 GrpE protein signature 43 59 8.1E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 PRINTS PR00773 GrpE protein signature 152 171 8.1E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 PRINTS PR00773 GrpE protein signature 71 86 8.1E-24 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 Gene3D G3DSA:3.90.20.20 26 116 2.0E-24 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 ProSitePatterns PS01071 grpE protein signature. 128 171 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 Hamap MF_01151 Protein GrpE [grpE]. 3 173 19.429 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 Gene3D G3DSA:2.30.22.10 118 173 2.4E-20 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 Pfam PF01025 GrpE 19 173 3.6E-45 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 PANTHER PTHR21237 29 173 3.4E-44 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 SUPERFAMILY SSF58014 27 118 8.63E-24 T 23-04-2016 CFF04554_RS05390 1079efc8b077b453f4065f5e91fc0fd1 173 SUPERFAMILY SSF51064 125 173 2.35E-15 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 PANTHER PTHR23115:SF112 1 398 7.5E-249 T 23-04-2016 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 SUPERFAMILY SSF50447 210 306 6.87E-32 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 Gene3D G3DSA:3.40.50.300 3 213 5.7E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 SUPERFAMILY SSF52540 8 231 1.21E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 Gene3D G3DSA:2.40.30.10 305 398 1.7E-46 T 23-04-2016 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 SUPERFAMILY SSF50465 307 399 1.25E-36 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 PANTHER PTHR23115 1 398 7.5E-249 T 23-04-2016 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 399 60.352 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 5.8E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 Pfam PF03144 Elongation factor Tu domain 2 230 299 2.7E-19 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 Gene3D G3DSA:2.40.30.10 214 303 9.3E-38 T 23-04-2016 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 1.5E-58 T 23-04-2016 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 398 1.4E-231 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CFF04554_RS06770 7a12cc6e2bfd96e4d2f78b7c31aafa9e 399 Pfam PF03143 Elongation factor Tu C-terminal domain 303 397 7.3E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CFF04554_RS08130 61589c514ddd805f6086c20f7bc1bfab 285 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 204 270 1.0E-12 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CFF04554_RS08130 61589c514ddd805f6086c20f7bc1bfab 285 Gene3D G3DSA:3.40.50.2000 204 280 3.7E-13 T 23-04-2016 CFF04554_RS08130 61589c514ddd805f6086c20f7bc1bfab 285 Gene3D G3DSA:3.40.50.2000 22 100 6.0E-9 T 23-04-2016 CFF04554_RS08130 61589c514ddd805f6086c20f7bc1bfab 285 SUPERFAMILY SSF53756 1 283 1.54E-33 T 23-04-2016 CFF04554_RS01830 29b62b4d9b84f9b24f7491a51d1893a0 199 Gene3D G3DSA:3.10.450.50 106 160 2.4E-6 T 23-04-2016 IPR032710 NTF2-like domain CFF04554_RS01830 29b62b4d9b84f9b24f7491a51d1893a0 199 Gene3D G3DSA:3.10.450.50 39 62 2.4E-6 T 23-04-2016 IPR032710 NTF2-like domain CFF04554_RS01830 29b62b4d9b84f9b24f7491a51d1893a0 199 Pfam PF05494 MlaC protein 39 186 8.3E-32 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CFF04554_RS01830 29b62b4d9b84f9b24f7491a51d1893a0 199 Gene3D G3DSA:1.10.10.640 161 186 8.4E-12 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical CFF04554_RS01830 29b62b4d9b84f9b24f7491a51d1893a0 199 Gene3D G3DSA:1.10.10.640 63 103 8.4E-12 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical CFF04554_RS01830 29b62b4d9b84f9b24f7491a51d1893a0 199 PANTHER PTHR36573 59 186 1.5E-15 T 23-04-2016 CFF04554_RS04510 8c478c233035df7d0a83758e7e9e0c3a 324 SUPERFAMILY SSF53850 86 229 2.27E-9 T 23-04-2016 CFF04554_RS04510 8c478c233035df7d0a83758e7e9e0c3a 324 PANTHER PTHR30349 7 319 8.8E-110 T 23-04-2016 CFF04554_RS04510 8c478c233035df7d0a83758e7e9e0c3a 324 PIRSF PIRSF017082 2 324 5.1E-69 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CFF04554_RS04510 8c478c233035df7d0a83758e7e9e0c3a 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 55 321 1.0E-19 T 23-04-2016 IPR005064 Bordetella uptake gene GO:0030288 CFF04554_RS04510 8c478c233035df7d0a83758e7e9e0c3a 324 PANTHER PTHR30349:SF29 7 319 8.8E-110 T 23-04-2016 CFF04554_RS04510 8c478c233035df7d0a83758e7e9e0c3a 324 Gene3D G3DSA:3.40.190.10 124 223 8.0E-4 T 23-04-2016 CFF04554_RS00130 b11494f91b04b83b95c11463680f0dac 273 Pfam PF03498 Cytolethal distending toxin A/C domain 128 267 2.9E-27 T 23-04-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 CFF04554_RS00130 b11494f91b04b83b95c11463680f0dac 273 SUPERFAMILY SSF50370 112 268 5.5E-40 T 23-04-2016 IPR000772 Ricin B, lectin domain CFF04554_RS00130 b11494f91b04b83b95c11463680f0dac 273 Gene3D G3DSA:2.80.10.50 110 268 1.5E-45 T 23-04-2016 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 PANTHER PTHR13691 1 274 5.6E-127 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.3E-30 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 SMART SM01382 125 253 7.2E-93 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 PIRSF PIRSF002158 12 276 1.1E-96 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 Gene3D G3DSA:2.30.30.30 123 196 4.6E-35 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 2.1E-130 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 Gene3D G3DSA:4.10.950.10 197 274 7.9E-32 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 45.278 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 SMART SM01383 42 118 2.6E-41 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 Gene3D G3DSA:2.40.50.140 1 114 1.1E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 SUPERFAMILY SSF50249 2 119 2.5E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 SUPERFAMILY SSF50104 127 273 9.63E-61 T 23-04-2016 IPR008991 Translation protein SH3-like domain CFF04554_RS00180 3f09ac060ddcc6dc5af84739b9ee9d58 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 1.2E-56 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 3.7E-49 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 283 294 2.0E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 45 59 2.0E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 78 91 2.0E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 118 132 2.0E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 221 231 2.0E-29 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PANTHER PTHR11405 1 303 4.6E-142 T 23-04-2016 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 305 77.972 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 Gene3D G3DSA:3.40.50.1370 1 137 3.6E-55 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 302 7.7E-120 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PANTHER PTHR11405:SF1 1 303 4.6E-142 T 23-04-2016 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 7.3E-23 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 7.3E-23 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 7.3E-23 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 7.3E-23 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 SUPERFAMILY SSF53671 1 304 8.51E-102 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 303 3.4E-53 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07990 9d1b73b368d4f59d2fce74fd25a35e18 309 Gene3D G3DSA:3.40.50.1370 138 291 1.9E-58 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 SUPERFAMILY SSF88697 10 112 2.44E-19 T 23-04-2016 IPR015947 PUA-like domain CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 727 746 2.7E-48 T 23-04-2016 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 605 621 2.7E-48 T 23-04-2016 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 750 768 2.7E-48 T 23-04-2016 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 697 716 2.7E-48 T 23-04-2016 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 366 385 2.7E-48 T 23-04-2016 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 SUPERFAMILY SSF52540 317 597 8.63E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 SUPERFAMILY SSF54211 605 794 3.79E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 SMART SM00382 358 503 2.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 PANTHER PTHR10046:SF24 1 798 9.0E-291 T 23-04-2016 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 362 498 2.4E-21 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 Gene3D G3DSA:3.40.50.300 317 511 4.3E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 580 796 2.4E-78 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 TIGRFAM TIGR00763 lon: endopeptidase La 15 796 3.7E-269 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 Hamap MF_01973 Lon protease [lon]. 13 797 58.727 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 SMART SM00464 12 203 3.3E-33 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 PIRSF PIRSF001174 1 798 6.3E-300 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 Gene3D G3DSA:1.10.8.60 512 594 4.8E-32 T 23-04-2016 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 PANTHER PTHR10046 1 798 9.0E-291 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 Gene3D G3DSA:3.30.230.10 601 796 7.8E-70 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 201 1.0E-18 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 Gene3D G3DSA:3.40.50.300 219 262 4.7E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05245 f6abe68205c6735ee76bba155f22644a 798 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 700 708 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CFF04554_RS07195 1cf537da6e353f15bbc64652ac36e898 322 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 243 1.4E-40 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CFF04554_RS07195 1cf537da6e353f15bbc64652ac36e898 322 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 313 1.0E-94 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 CFF04554_RS07195 1cf537da6e353f15bbc64652ac36e898 322 Gene3D G3DSA:3.90.25.10 180 297 1.5E-25 T 23-04-2016 CFF04554_RS07195 1cf537da6e353f15bbc64652ac36e898 322 SUPERFAMILY SSF51735 1 315 1.51E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07195 1cf537da6e353f15bbc64652ac36e898 322 PANTHER PTHR10366:SF469 2 318 5.4E-61 T 23-04-2016 CFF04554_RS07195 1cf537da6e353f15bbc64652ac36e898 322 PANTHER PTHR10366 2 318 5.4E-61 T 23-04-2016 CFF04554_RS07195 1cf537da6e353f15bbc64652ac36e898 322 Gene3D G3DSA:3.40.50.720 1 179 2.3E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS04620 cc1aab240345d1e673565ac6463d0e3f 288 Gene3D G3DSA:3.90.850.10 71 288 1.2E-69 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CFF04554_RS04620 cc1aab240345d1e673565ac6463d0e3f 288 PANTHER PTHR11820:SF6 20 288 9.5E-81 T 23-04-2016 CFF04554_RS04620 cc1aab240345d1e673565ac6463d0e3f 288 PANTHER PTHR11820 20 288 9.5E-81 T 23-04-2016 CFF04554_RS04620 cc1aab240345d1e673565ac6463d0e3f 288 SUPERFAMILY SSF56529 67 287 2.22E-66 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CFF04554_RS04620 cc1aab240345d1e673565ac6463d0e3f 288 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 79 287 1.3E-58 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CFF04554_RS02375 2748ccbf00ef8b19a00975cedee3fb5c 138 Gene3D G3DSA:1.20.120.160 18 119 4.9E-9 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CFF04554_RS02375 2748ccbf00ef8b19a00975cedee3fb5c 138 SUPERFAMILY SSF47226 16 130 4.71E-12 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 PRINTS PR00625 DnaJ domain signature 41 61 2.3E-29 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 PRINTS PR00625 DnaJ domain signature 61 80 2.3E-29 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 PRINTS PR00625 DnaJ domain signature 6 24 2.3E-29 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 PRINTS PR00625 DnaJ domain signature 24 39 2.3E-29 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 Gene3D G3DSA:2.60.260.20 111 133 9.7E-14 T 23-04-2016 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 Gene3D G3DSA:2.60.260.20 201 242 9.7E-14 T 23-04-2016 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 Gene3D G3DSA:2.10.230.10 134 200 9.7E-20 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 Pfam PF00684 DnaJ central domain 139 198 3.4E-12 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 360 36.05 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 SUPERFAMILY SSF49493 111 163 1.96E-13 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 SUPERFAMILY SSF49493 205 243 1.96E-13 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 Gene3D G3DSA:2.60.260.20 246 323 1.7E-15 T 23-04-2016 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 Gene3D G3DSA:1.10.287.110 4 95 1.1E-35 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 SUPERFAMILY SSF46565 3 98 3.14E-35 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 PANTHER PTHR24078:SF190 4 353 6.5E-128 T 23-04-2016 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 Pfam PF00226 DnaJ domain 4 66 8.4E-30 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 SUPERFAMILY SSF57938 126 200 8.63E-18 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 23-04-2016 IPR018253 DnaJ domain, conserved site CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 SUPERFAMILY SSF49493 248 333 2.75E-17 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 Pfam PF01556 DnaJ C terminal domain 112 322 1.1E-36 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 338 2.3E-123 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 SMART SM00271 3 61 6.1E-34 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS05860 b25f3ee8a0115e8c54faf7559f77a4f6 362 PANTHER PTHR24078 4 353 6.5E-128 T 23-04-2016 CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 SUPERFAMILY SSF53850 1 238 1.97E-61 T 23-04-2016 CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 Gene3D G3DSA:3.40.190.10 100 195 4.4E-19 T 23-04-2016 CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 Gene3D G3DSA:3.40.190.10 200 238 5.3E-43 T 23-04-2016 CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 Gene3D G3DSA:3.40.190.10 20 99 5.3E-43 T 23-04-2016 CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 SMART SM00062 22 241 3.1E-55 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 SMART SM00918 33 78 0.0075 T 23-04-2016 IPR019594 Ionotropic glutamate receptor, L-glutamate and glycine-binding domain GO:0004970|GO:0005234|GO:0016020 CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 238 5.6E-61 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 SMART SM00079 22 239 0.0019 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 PANTHER PTHR18966 21 238 4.8E-40 T 23-04-2016 CFF04554_RS06355 54e5d3800d5c12e64adbcb976a8d5b16 241 PANTHER PTHR18966:SF152 21 238 4.8E-40 T 23-04-2016 CFF04554_RS04790 fc2407706e8d126b7b0c0ecc275c47a8 129 PANTHER PTHR12231 35 128 1.2E-12 T 23-04-2016 CFF04554_RS04790 fc2407706e8d126b7b0c0ecc275c47a8 129 SMART SM00450 20 125 9.1E-17 T 23-04-2016 IPR001763 Rhodanese-like domain CFF04554_RS04790 fc2407706e8d126b7b0c0ecc275c47a8 129 SUPERFAMILY SSF52821 18 128 7.6E-22 T 23-04-2016 IPR001763 Rhodanese-like domain CFF04554_RS04790 fc2407706e8d126b7b0c0ecc275c47a8 129 Pfam PF00581 Rhodanese-like domain 26 118 3.9E-13 T 23-04-2016 IPR001763 Rhodanese-like domain CFF04554_RS04790 fc2407706e8d126b7b0c0ecc275c47a8 129 Gene3D G3DSA:3.40.250.10 19 125 7.5E-23 T 23-04-2016 IPR001763 Rhodanese-like domain CFF04554_RS05375 ebd6d99d18fd06b3e6203b2935be8987 582 SUPERFAMILY SSF52833 477 580 1.12E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS05375 ebd6d99d18fd06b3e6203b2935be8987 582 PANTHER PTHR32234 17 582 8.7E-128 T 23-04-2016 CFF04554_RS05375 ebd6d99d18fd06b3e6203b2935be8987 582 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 183 387 9.1E-17 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CFF04554_RS05375 ebd6d99d18fd06b3e6203b2935be8987 582 Gene3D G3DSA:2.60.40.1250 17 129 3.1E-19 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CFF04554_RS05375 ebd6d99d18fd06b3e6203b2935be8987 582 Gene3D G3DSA:3.40.30.10 484 581 7.0E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS05375 ebd6d99d18fd06b3e6203b2935be8987 582 SUPERFAMILY SSF74863 17 127 6.93E-17 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CFF04554_RS05375 ebd6d99d18fd06b3e6203b2935be8987 582 Pfam PF11412 Disulphide bond corrector protein DsbC 17 126 3.1E-16 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CFF04554_RS05375 ebd6d99d18fd06b3e6203b2935be8987 582 Pfam PF00085 Thioredoxin 477 579 7.6E-13 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CFF04554_RS05375 ebd6d99d18fd06b3e6203b2935be8987 582 PANTHER PTHR32234:SF0 17 582 8.7E-128 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 39 503 2.2E-141 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 520 41.758 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 PANTHER PTHR30081 234 500 1.1E-127 T 23-04-2016 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 PANTHER PTHR30081 37 89 1.1E-127 T 23-04-2016 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 PANTHER PTHR30081 137 198 1.1E-127 T 23-04-2016 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 SUPERFAMILY SSF82866 314 512 3.92E-43 T 23-04-2016 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 Pfam PF02355 Protein export membrane protein 339 507 1.9E-18 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 Gene3D G3DSA:1.20.1640.10 346 516 2.9E-27 T 23-04-2016 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 267 497 9.5E-81 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 PANTHER PTHR30081:SF1 234 500 1.1E-127 T 23-04-2016 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 PANTHER PTHR30081:SF1 37 89 1.1E-127 T 23-04-2016 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 PANTHER PTHR30081:SF1 137 198 1.1E-127 T 23-04-2016 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 2.4E-7 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 PRINTS PR00702 Acriflavin resistance protein family signature 481 504 2.4E-7 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS03655 ad37b04c0d4577619e4feec181c665ed 529 PRINTS PR00702 Acriflavin resistance protein family signature 353 376 2.4E-7 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS05735 3c26a48dc5cdd50efbf298e30e797705 234 Pfam PF13847 Methyltransferase domain 52 158 3.7E-12 T 23-04-2016 IPR025714 Methyltransferase domain CFF04554_RS05735 3c26a48dc5cdd50efbf298e30e797705 234 Gene3D G3DSA:3.40.50.150 15 234 6.3E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05735 3c26a48dc5cdd50efbf298e30e797705 234 PANTHER PTHR10108:SF809 2 228 5.7E-29 T 23-04-2016 CFF04554_RS05735 3c26a48dc5cdd50efbf298e30e797705 234 PIRSF PIRSF006325 1 234 1.2E-81 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 CFF04554_RS05735 3c26a48dc5cdd50efbf298e30e797705 234 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 2 234 1.7E-68 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 CFF04554_RS05735 3c26a48dc5cdd50efbf298e30e797705 234 SUPERFAMILY SSF53335 15 234 1.52E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05735 3c26a48dc5cdd50efbf298e30e797705 234 PANTHER PTHR10108 2 228 5.7E-29 T 23-04-2016 CFF04554_RS05735 3c26a48dc5cdd50efbf298e30e797705 234 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 1 234 37.979 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 CFF04554_RS04850 72683ab94624bc77d6673815dbb864ab 395 Gene3D G3DSA:3.60.70.12 9 266 2.2E-80 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CFF04554_RS04850 72683ab94624bc77d6673815dbb864ab 395 SUPERFAMILY SSF56266 14 392 1.57E-112 T 23-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CFF04554_RS04850 72683ab94624bc77d6673815dbb864ab 395 PANTHER PTHR23100 15 395 1.6E-129 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CFF04554_RS04850 72683ab94624bc77d6673815dbb864ab 395 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 25 395 6.0E-124 T 23-04-2016 CFF04554_RS04850 72683ab94624bc77d6673815dbb864ab 395 PANTHER PTHR23100:SF0 15 395 1.6E-129 T 23-04-2016 CFF04554_RS04850 72683ab94624bc77d6673815dbb864ab 395 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 395 112.52 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CFF04554_RS04850 72683ab94624bc77d6673815dbb864ab 395 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 11 395 1.0E-114 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CFF04554_RS04850 72683ab94624bc77d6673815dbb864ab 395 Pfam PF01960 ArgJ family 20 395 1.0E-123 T 23-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 SUPERFAMILY SSF51246 330 446 1.83E-37 T 23-04-2016 IPR011054 Rudiment single hybrid motif CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 8.4E-43 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 Gene3D G3DSA:3.40.50.20 1 128 8.2E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 PANTHER PTHR18866 1 471 1.9E-265 T 23-04-2016 CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 SUPERFAMILY SSF52440 1 112 7.05E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 2.5E-35 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 4.8E-76 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 Gene3D G3DSA:3.30.1490.20 129 202 4.5E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 9.1E-190 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 SMART SM00878 336 442 7.4E-53 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 SUPERFAMILY SSF56059 82 352 3.36E-64 T 23-04-2016 CFF04554_RS03400 b3b72c46f60efae005d8d45c9fe13698 481 Gene3D G3DSA:3.30.470.20 203 446 5.8E-96 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 Gene3D G3DSA:3.30.450.20 30 131 1.9E-18 T 23-04-2016 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 Gene3D G3DSA:3.30.450.20 151 250 2.6E-21 T 23-04-2016 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 SMART SM00283 227 426 9.7E-14 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 Gene3D G3DSA:1.10.287.950 251 426 2.8E-49 T 23-04-2016 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 SMART SM00086 213 255 4.6E-4 T 23-04-2016 IPR001610 PAC motif CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 SMART SM00086 91 133 4.5 T 23-04-2016 IPR001610 PAC motif CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 SUPERFAMILY SSF58104 229 426 3.79E-57 T 23-04-2016 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 SUPERFAMILY SSF58104 169 191 3.79E-57 T 23-04-2016 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 PANTHER PTHR24422 1 426 5.4E-141 T 23-04-2016 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 Pfam PF08447 PAS fold 40 126 4.0E-12 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 SUPERFAMILY SSF55785 29 130 1.01E-21 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 PANTHER PTHR24422:SF12 1 426 5.4E-141 T 23-04-2016 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 Pfam PF13426 PAS domain 153 254 4.3E-13 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 285 425 2.0E-39 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 SMART SM00091 16 83 1.9 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 SMART SM00091 140 208 14.0 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 134 1.7E-12 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01620 bb7e4e7c0b07c3014b9746fa114e50fc 428 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 255 6.0E-12 T 23-04-2016 IPR000014 PAS domain CFF04554_RS07950 e85447fa58bc6a6791b5f2096c218c41 150 Gene3D G3DSA:2.40.50.100 72 148 9.8E-25 T 23-04-2016 CFF04554_RS07950 e85447fa58bc6a6791b5f2096c218c41 150 PANTHER PTHR23151:SF64 1 149 3.5E-27 T 23-04-2016 CFF04554_RS07950 e85447fa58bc6a6791b5f2096c218c41 150 Pfam PF00364 Biotin-requiring enzyme 74 146 2.0E-16 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CFF04554_RS07950 e85447fa58bc6a6791b5f2096c218c41 150 SUPERFAMILY SSF51230 74 148 2.36E-20 T 23-04-2016 IPR011053 Single hybrid motif CFF04554_RS07950 e85447fa58bc6a6791b5f2096c218c41 150 PANTHER PTHR23151 1 149 3.5E-27 T 23-04-2016 CFF04554_RS07950 e85447fa58bc6a6791b5f2096c218c41 150 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 4 149 3.4E-43 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CFF04554_RS07950 e85447fa58bc6a6791b5f2096c218c41 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 77 90 8.6E-16 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CFF04554_RS07950 e85447fa58bc6a6791b5f2096c218c41 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 94 108 8.6E-16 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CFF04554_RS07950 e85447fa58bc6a6791b5f2096c218c41 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 109 122 8.6E-16 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CFF04554_RS08120 c8a4d42f87699d713df4352358df0912 327 SUPERFAMILY SSF102114 27 316 5.49E-44 T 23-04-2016 CFF04554_RS08120 c8a4d42f87699d713df4352358df0912 327 Pfam PF13186 Iron-sulfur cluster-binding domain 246 312 4.6E-14 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CFF04554_RS08120 c8a4d42f87699d713df4352358df0912 327 Gene3D G3DSA:3.20.20.70 31 315 8.2E-41 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS08120 c8a4d42f87699d713df4352358df0912 327 PANTHER PTHR11228 8 316 7.2E-24 T 23-04-2016 CFF04554_RS08120 c8a4d42f87699d713df4352358df0912 327 Pfam PF04055 Radical SAM superfamily 37 169 5.4E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS08105 efab09161d00dc56400fa8459d5c987d 355 PIRSF PIRSF000390 1 355 5.2E-83 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS08105 efab09161d00dc56400fa8459d5c987d 355 PANTHER PTHR30244:SF16 10 353 7.3E-68 T 23-04-2016 CFF04554_RS08105 efab09161d00dc56400fa8459d5c987d 355 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 349 6.7E-80 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS08105 efab09161d00dc56400fa8459d5c987d 355 PANTHER PTHR30244 10 353 7.3E-68 T 23-04-2016 CFF04554_RS08105 efab09161d00dc56400fa8459d5c987d 355 Gene3D G3DSA:3.40.640.10 2 239 9.2E-73 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS08105 efab09161d00dc56400fa8459d5c987d 355 SUPERFAMILY SSF53383 2 353 1.11E-85 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS08105 efab09161d00dc56400fa8459d5c987d 355 Gene3D G3DSA:3.90.1150.10 246 353 4.0E-6 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS03880 97875ae94c5a3e88d23f83c7c94fb1b3 178 PANTHER PTHR20857 4 174 6.2E-15 T 23-04-2016 CFF04554_RS03880 97875ae94c5a3e88d23f83c7c94fb1b3 178 Gene3D G3DSA:3.20.20.70 4 178 1.5E-31 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS03880 97875ae94c5a3e88d23f83c7c94fb1b3 178 SUPERFAMILY SSF51391 4 177 3.4E-26 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CFF04554_RS03880 97875ae94c5a3e88d23f83c7c94fb1b3 178 Pfam PF02581 Thiamine monophosphate synthase/TENI 4 174 2.1E-22 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CFF04554_RS07045 69a95d588247a5dfd485a07d5ea116fc 371 PANTHER PTHR12526 2 370 3.3E-41 T 23-04-2016 CFF04554_RS07045 69a95d588247a5dfd485a07d5ea116fc 371 SUPERFAMILY SSF53756 21 369 3.18E-61 T 23-04-2016 CFF04554_RS07045 69a95d588247a5dfd485a07d5ea116fc 371 Gene3D G3DSA:3.40.50.2000 194 345 2.5E-21 T 23-04-2016 CFF04554_RS07045 69a95d588247a5dfd485a07d5ea116fc 371 Pfam PF13477 Glycosyl transferase 4-like 9 150 9.3E-9 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07045 69a95d588247a5dfd485a07d5ea116fc 371 Pfam PF00534 Glycosyl transferases group 1 191 346 1.7E-33 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 Pfam PF01568 Molydopterin dinucleotide binding domain 654 768 5.1E-12 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 SUPERFAMILY SSF50692 625 776 5.88E-27 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 Gene3D G3DSA:3.40.228.10 19 200 2.3E-65 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 Pfam PF00384 Molybdopterin oxidoreductase 10 385 6.4E-42 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 SUPERFAMILY SSF53706 1 481 7.46E-117 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 Gene3D G3DSA:2.40.40.20 592 603 7.2E-38 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 Gene3D G3DSA:2.40.40.20 637 776 7.2E-38 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 Gene3D G3DSA:2.40.40.20 469 499 7.2E-38 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 PANTHER PTHR11615:SF140 224 412 1.1E-114 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 PANTHER PTHR11615:SF140 555 790 1.1E-114 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 PANTHER PTHR11615:SF140 1 174 1.1E-114 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 PANTHER PTHR11615 224 412 1.1E-114 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 PANTHER PTHR11615 555 790 1.1E-114 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 PANTHER PTHR11615 1 174 1.1E-114 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 Gene3D G3DSA:3.40.50.740 1 18 1.0E-34 T 23-04-2016 CFF04554_RS07840 817a6a2f875c2e74119fe6cf0573684e 790 Gene3D G3DSA:3.40.50.740 265 398 1.0E-34 T 23-04-2016 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 SUPERFAMILY SSF52374 14 157 1.32E-17 T 23-04-2016 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 SUPERFAMILY SSF82114 145 276 3.71E-32 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 Gene3D G3DSA:3.40.50.620 8 157 5.7E-25 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 PANTHER PTHR22749:SF0 14 273 3.2E-42 T 23-04-2016 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 Gene3D G3DSA:2.40.30.30 159 276 9.9E-25 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 Pfam PF01687 Riboflavin kinase 155 273 4.3E-24 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 Pfam PF06574 FAD synthetase 70 137 2.2E-5 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 Pfam PF06574 FAD synthetase 9 36 1.5E-6 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 SMART SM00904 154 276 8.4E-39 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 PANTHER PTHR22749 14 273 3.2E-42 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 CFF04554_RS05740 4e462b36d82d971443167fc68e9e1d4d 293 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 15 273 5.0E-57 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 PRINTS PR01388 Cytolethal distending toxin B signature 93 111 9.7E-55 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 PRINTS PR01388 Cytolethal distending toxin B signature 242 258 9.7E-55 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 PRINTS PR01388 Cytolethal distending toxin B signature 136 155 9.7E-55 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 PRINTS PR01388 Cytolethal distending toxin B signature 179 194 9.7E-55 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 PRINTS PR01388 Cytolethal distending toxin B signature 59 79 9.7E-55 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 PRINTS PR01388 Cytolethal distending toxin B signature 18 39 9.7E-55 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 Gene3D G3DSA:3.60.10.10 7 262 1.7E-106 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 PIRSF PIRSF018539 1 264 2.8E-113 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 SUPERFAMILY SSF56219 20 258 5.63E-31 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS00125 6f913b7f96c5a7f892751aa1c4b16307 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 24 255 4.5E-11 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 Pfam PF01814 Hemerythrin HHE cation binding domain 18 140 2.8E-6 T 23-04-2016 IPR012312 Haemerythrin-like CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 383 6.8E-52 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 9 142 2.4E-23 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 381 6.4E-43 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 SUPERFAMILY SSF55073 230 384 1.26E-44 T 23-04-2016 IPR029787 Nucleotide cyclase CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 SMART SM00267 214 385 8.4E-47 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 PANTHER PTHR10799 258 381 8.6E-23 T 23-04-2016 CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 PANTHER PTHR10799 13 18 8.6E-23 T 23-04-2016 CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 Gene3D G3DSA:1.20.120.50 6 142 6.2E-27 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 SUPERFAMILY SSF47188 7 142 1.7E-24 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 PANTHER PTHR10799:SF774 258 381 8.6E-23 T 23-04-2016 CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 PANTHER PTHR10799:SF774 13 18 8.6E-23 T 23-04-2016 CFF04554_RS03000 e15d63d11f11a7d6dacdd8649cf86766 385 Gene3D G3DSA:3.30.70.270 227 384 1.0E-47 T 23-04-2016 CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 77 138 9.0E-11 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 Gene3D G3DSA:1.10.645.10 178 554 1.0E-42 T 23-04-2016 IPR029014 NiFe hydrogenase-like CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 291 561 2.7E-98 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 SUPERFAMILY SSF143243 7 191 7.98E-43 T 23-04-2016 CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 PANTHER PTHR11993:SF28 112 556 2.8E-164 T 23-04-2016 CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 Hamap MF_01397 NADH-quinone oxidoreductase subunit C/D [nuoC]. 19 561 50.508 T 23-04-2016 IPR026662 NADH-quinone oxidoreductase subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 170 561 41.357 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 24 143 4.5E-33 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 PANTHER PTHR11993 112 556 2.8E-164 T 23-04-2016 CFF04554_RS00795 06869b1968846a1124291dd074a9f235 561 SUPERFAMILY SSF56762 187 561 6.41E-109 T 23-04-2016 IPR029014 NiFe hydrogenase-like CFF04554_RS01240 cf6d4dd5088344c26168d33e2be73a33 122 SUPERFAMILY SSF57716 81 117 1.52E-9 T 23-04-2016 CFF04554_RS01240 cf6d4dd5088344c26168d33e2be73a33 122 SUPERFAMILY SSF109635 1 80 3.14E-14 T 23-04-2016 CFF04554_RS01240 cf6d4dd5088344c26168d33e2be73a33 122 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 84 108 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CFF04554_RS01240 cf6d4dd5088344c26168d33e2be73a33 122 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 79 114 4.1E-10 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CFF04554_RS01240 cf6d4dd5088344c26168d33e2be73a33 122 PANTHER PTHR33823 1 118 8.0E-20 T 23-04-2016 CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 Gene3D G3DSA:2.60.40.10 228 306 3.5E-12 T 23-04-2016 IPR013783 Immunoglobulin-like fold CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 Gene3D G3DSA:2.60.40.10 37 115 1.2E-11 T 23-04-2016 IPR013783 Immunoglobulin-like fold CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 Gene3D G3DSA:2.60.40.10 326 399 3.4E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 Gene3D G3DSA:2.60.40.10 140 221 1.4E-9 T 23-04-2016 IPR013783 Immunoglobulin-like fold CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 SUPERFAMILY SSF49265 35 219 4.29E-16 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 SUPERFAMILY SSF49265 222 392 5.09E-10 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 SMART SM00060 223 301 140.0 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 SMART SM00060 127 208 6.6 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 SMART SM00060 314 392 12.0 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 CFF04554_RS06285 36c6a5c69ec6b6df0b8724f3a77d2914 404 SMART SM00060 29 113 0.12 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 PANTHER PTHR15893 1 85 1.6E-48 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 2.0E-16 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 2.5E-40 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 SUPERFAMILY SSF110324 2 83 7.67E-35 T 23-04-2016 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.558 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 Gene3D G3DSA:2.40.50.100 20 84 2.3E-34 T 23-04-2016 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.0E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.0E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.0E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07820 ed3fc2758e0ae3fea9c3f3ddbdc9b319 85 Pfam PF01016 Ribosomal L27 protein 2 81 7.5E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01695 baaead0e7e7a19ec58f72be3685f10d6 181 PANTHER PTHR17224:SF1 3 165 2.6E-54 T 23-04-2016 CFF04554_RS01695 baaead0e7e7a19ec58f72be3685f10d6 181 Pfam PF01195 Peptidyl-tRNA hydrolase 3 175 3.9E-53 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CFF04554_RS01695 baaead0e7e7a19ec58f72be3685f10d6 181 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 178 3.3E-54 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CFF04554_RS01695 baaead0e7e7a19ec58f72be3685f10d6 181 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 170 32.635 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CFF04554_RS01695 baaead0e7e7a19ec58f72be3685f10d6 181 Gene3D G3DSA:3.40.50.1470 1 170 5.4E-57 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CFF04554_RS01695 baaead0e7e7a19ec58f72be3685f10d6 181 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 102 112 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CFF04554_RS01695 baaead0e7e7a19ec58f72be3685f10d6 181 SUPERFAMILY SSF53178 1 167 2.35E-54 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CFF04554_RS01695 baaead0e7e7a19ec58f72be3685f10d6 181 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CFF04554_RS01695 baaead0e7e7a19ec58f72be3685f10d6 181 PANTHER PTHR17224 3 165 2.6E-54 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 SUPERFAMILY SSF54768 109 221 1.34E-24 T 23-04-2016 CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 Pfam PF14622 Ribonuclease-III-like 17 137 9.6E-33 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 PANTHER PTHR11207 4 223 1.3E-76 T 23-04-2016 CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 Pfam PF00035 Double-stranded RNA binding motif 155 219 5.8E-15 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 Gene3D G3DSA:1.10.1520.10 2 148 2.2E-48 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 SMART SM00358 155 222 1.1E-20 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 218 30.073 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 Gene3D G3DSA:3.30.160.20 154 219 2.5E-26 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 SMART SM00535 19 148 7.0E-48 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 SUPERFAMILY SSF69065 3 157 8.02E-48 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CFF04554_RS08770 d637f124f6b17e536c71120ceeccfff4 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 219 3.7E-74 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CFF04554_RS08230 9c34bea4e2d85bd33045bea6f3df656f 253 Pfam PF08241 Methyltransferase domain 41 131 2.6E-14 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CFF04554_RS08230 9c34bea4e2d85bd33045bea6f3df656f 253 PANTHER PTHR10108:SF730 6 237 7.5E-23 T 23-04-2016 CFF04554_RS08230 9c34bea4e2d85bd33045bea6f3df656f 253 Gene3D G3DSA:3.40.50.150 5 141 2.5E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08230 9c34bea4e2d85bd33045bea6f3df656f 253 SUPERFAMILY SSF53335 11 185 5.22E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08230 9c34bea4e2d85bd33045bea6f3df656f 253 PANTHER PTHR10108 6 237 7.5E-23 T 23-04-2016 CFF04554_RS03730 efd3a34a44de5aed0087d5a310eb9737 403 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 400 3.7E-163 T 23-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 CFF04554_RS03730 efd3a34a44de5aed0087d5a310eb9737 403 Gene3D G3DSA:3.40.50.1100 70 321 4.2E-75 T 23-04-2016 CFF04554_RS03730 efd3a34a44de5aed0087d5a310eb9737 403 SUPERFAMILY SSF55021 325 394 2.17E-6 T 23-04-2016 CFF04554_RS03730 efd3a34a44de5aed0087d5a310eb9737 403 SUPERFAMILY SSF53686 4 316 5.37E-98 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS03730 efd3a34a44de5aed0087d5a310eb9737 403 Gene3D G3DSA:3.30.70.260 328 392 8.6E-6 T 23-04-2016 CFF04554_RS03730 efd3a34a44de5aed0087d5a310eb9737 403 PANTHER PTHR10314:SF17 1 356 8.3E-144 T 23-04-2016 CFF04554_RS03730 efd3a34a44de5aed0087d5a310eb9737 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 304 4.4E-79 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS03730 efd3a34a44de5aed0087d5a310eb9737 403 PANTHER PTHR10314 1 356 8.3E-144 T 23-04-2016 CFF04554_RS01995 50a0c3a1bed7bc0ebbfb9106d9b8e8e4 189 Pfam PF00034 Cytochrome c 82 161 2.1E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01995 50a0c3a1bed7bc0ebbfb9106d9b8e8e4 189 Gene3D G3DSA:1.10.760.10 78 161 5.9E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01995 50a0c3a1bed7bc0ebbfb9106d9b8e8e4 189 SUPERFAMILY SSF46626 79 162 1.38E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS04625 cefdf90f58724811aa64a3189bb3bba8 387 Gene3D G3DSA:3.90.1150.10 2 45 3.5E-26 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS04625 cefdf90f58724811aa64a3189bb3bba8 387 Gene3D G3DSA:3.90.1150.10 288 382 3.5E-26 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS04625 cefdf90f58724811aa64a3189bb3bba8 387 PANTHER PTHR11986:SF79 6 387 2.0E-128 T 23-04-2016 CFF04554_RS04625 cefdf90f58724811aa64a3189bb3bba8 387 PANTHER PTHR11986 6 387 2.0E-128 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS04625 cefdf90f58724811aa64a3189bb3bba8 387 SUPERFAMILY SSF53383 4 383 7.83E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS04625 cefdf90f58724811aa64a3189bb3bba8 387 Pfam PF00202 Aminotransferase class-III 11 380 8.8E-88 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS04625 cefdf90f58724811aa64a3189bb3bba8 387 Gene3D G3DSA:3.40.640.10 46 285 4.2E-69 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS04625 cefdf90f58724811aa64a3189bb3bba8 387 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 207 244 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 TIGRFAM TIGR03403 nifS_epsilon: cysteine desulfurase, NifS family 3 384 1.0E-209 T 23-04-2016 IPR017773 Cysteine desulfurase NifS, proteobacteria GO:0006534|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 SUPERFAMILY SSF53383 3 377 6.58E-101 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 Gene3D G3DSA:3.90.1150.10 250 373 1.0E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 Pfam PF00266 Aminotransferase class-V 3 366 1.6E-78 T 23-04-2016 IPR000192 Aminotransferase class V domain CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 PANTHER PTHR11601:SF45 3 385 9.5E-155 T 23-04-2016 CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 ProSitePatterns PS00018 EF-hand calcium-binding domain. 123 135 - T 23-04-2016 IPR018247 EF-Hand 1, calcium-binding site CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 PANTHER PTHR11601 3 385 9.5E-155 T 23-04-2016 CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 PIRSF PIRSF005572 1 382 5.4E-119 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CFF04554_RS08560 5b48be2d658a628330f50c28b05051bc 396 Gene3D G3DSA:3.40.640.10 15 249 2.4E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 Pfam PF01842 ACT domain 272 308 5.5E-9 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 SUPERFAMILY SSF55021 255 346 1.01E-19 T 23-04-2016 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 Gene3D G3DSA:3.40.1160.10 1 245 6.5E-70 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 Pfam PF13840 ACT domain 335 398 7.4E-12 T 23-04-2016 IPR027795 GATS-like ACT domain CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 Gene3D G3DSA:3.30.70.260 274 339 1.7E-6 T 23-04-2016 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 2.4E-137 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 1.5E-116 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 PANTHER PTHR21499 1 404 1.3E-147 T 23-04-2016 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 PIRSF PIRSF000726 57 404 1.4E-130 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 Pfam PF00696 Amino acid kinase family 1 225 2.3E-50 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 SUPERFAMILY SSF55021 329 403 5.66E-22 T 23-04-2016 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 SUPERFAMILY SSF53633 3 243 2.36E-73 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS05770 8ae69368270e8fc16376f3a54fc7cbf9 404 PANTHER PTHR21499:SF27 1 404 1.3E-147 T 23-04-2016 CFF04554_RS00115 0cec422e940c3bef97c9a25aa0f19c4a 223 Gene3D G3DSA:3.20.20.70 28 192 1.7E-21 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS00115 0cec422e940c3bef97c9a25aa0f19c4a 223 SUPERFAMILY SSF102114 27 203 2.35E-21 T 23-04-2016 CFF04554_RS00115 0cec422e940c3bef97c9a25aa0f19c4a 223 Pfam PF04055 Radical SAM superfamily 25 157 6.5E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS00115 0cec422e940c3bef97c9a25aa0f19c4a 223 PANTHER PTHR11228 1 194 3.9E-27 T 23-04-2016 CFF04554_RS00115 0cec422e940c3bef97c9a25aa0f19c4a 223 Pfam PF13353 4Fe-4S single cluster domain 22 92 1.5E-6 T 23-04-2016 CFF04554_RS00115 0cec422e940c3bef97c9a25aa0f19c4a 223 PANTHER PTHR11228:SF27 1 194 3.9E-27 T 23-04-2016 CFF04554_RS00115 0cec422e940c3bef97c9a25aa0f19c4a 223 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 6 191 4.6E-52 T 23-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein CFF04554_RS05135 c13ec67f5a8e81ea8b7649974956fc14 176 Pfam PF05239 PRC-barrel domain 94 169 1.3E-7 T 23-04-2016 IPR027275 PRC-barrel domain CFF04554_RS05135 c13ec67f5a8e81ea8b7649974956fc14 176 Pfam PF01782 RimM N-terminal domain 11 79 2.8E-8 T 23-04-2016 IPR002676 RimM protein GO:0006364 CFF04554_RS05135 c13ec67f5a8e81ea8b7649974956fc14 176 SUPERFAMILY SSF50447 4 83 2.08E-7 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CFF04554_RS05135 c13ec67f5a8e81ea8b7649974956fc14 176 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 172 17.654 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CFF04554_RS05135 c13ec67f5a8e81ea8b7649974956fc14 176 SUPERFAMILY SSF50346 96 167 2.82E-11 T 23-04-2016 IPR011033 PRC-barrel-like CFF04554_RS05135 c13ec67f5a8e81ea8b7649974956fc14 176 Gene3D G3DSA:2.40.30.60 2 79 2.6E-4 T 23-04-2016 IPR002676 RimM protein GO:0006364 CFF04554_RS05135 c13ec67f5a8e81ea8b7649974956fc14 176 PANTHER PTHR33692 4 175 7.2E-19 T 23-04-2016 CFF04554_RS05135 c13ec67f5a8e81ea8b7649974956fc14 176 Gene3D G3DSA:2.30.30.240 96 169 5.3E-12 T 23-04-2016 CFF04554_RS05135 c13ec67f5a8e81ea8b7649974956fc14 176 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 3.9E-29 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CFF04554_RS03940 3094c3c0bc04ad418a9185cbff677b8d 415 PANTHER PTHR11851 1 412 6.3E-99 T 23-04-2016 CFF04554_RS03940 3094c3c0bc04ad418a9185cbff677b8d 415 Pfam PF05193 Peptidase M16 inactive domain 170 348 1.0E-28 T 23-04-2016 IPR007863 Peptidase M16, C-terminal CFF04554_RS03940 3094c3c0bc04ad418a9185cbff677b8d 415 Gene3D G3DSA:3.30.830.10 5 220 7.4E-54 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CFF04554_RS03940 3094c3c0bc04ad418a9185cbff677b8d 415 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 37 60 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CFF04554_RS03940 3094c3c0bc04ad418a9185cbff677b8d 415 SUPERFAMILY SSF63411 3 210 3.33E-54 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CFF04554_RS03940 3094c3c0bc04ad418a9185cbff677b8d 415 SUPERFAMILY SSF63411 227 411 2.23E-32 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CFF04554_RS03940 3094c3c0bc04ad418a9185cbff677b8d 415 Gene3D G3DSA:3.30.830.10 233 408 2.0E-25 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 CFF04554_RS03940 3094c3c0bc04ad418a9185cbff677b8d 415 PANTHER PTHR11851:SF136 1 412 6.3E-99 T 23-04-2016 CFF04554_RS03940 3094c3c0bc04ad418a9185cbff677b8d 415 Pfam PF00675 Insulinase (Peptidase family M16) 29 132 3.5E-23 T 23-04-2016 IPR011765 Peptidase M16, N-terminal CFF04554_RS06000 881e4f9b4cf9103ec6bae7a5a1f9e978 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 219 1.6E-13 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS06000 881e4f9b4cf9103ec6bae7a5a1f9e978 220 SUPERFAMILY SSF161098 13 204 5.23E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS06000 881e4f9b4cf9103ec6bae7a5a1f9e978 220 Gene3D G3DSA:1.10.3720.10 10 218 2.5E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS06000 881e4f9b4cf9103ec6bae7a5a1f9e978 220 PANTHER PTHR30614 9 213 2.5E-49 T 23-04-2016 CFF04554_RS06000 881e4f9b4cf9103ec6bae7a5a1f9e978 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 110 1.8E-18 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 1 925 0.0 T 23-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Gene3D G3DSA:3.40.228.10 177 292 1.0E-44 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Gene3D G3DSA:3.40.228.10 363 444 1.0E-44 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Gene3D G3DSA:2.20.25.90 35 92 9.9E-22 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 37 89 2.8E-18 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Pfam PF00384 Molybdopterin oxidoreductase 93 613 1.2E-68 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 41 58 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 PANTHER PTHR11615:SF123 717 925 1.2E-290 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 PANTHER PTHR11615:SF123 37 285 1.2E-290 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 PANTHER PTHR11615:SF123 390 635 1.2E-290 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Gene3D G3DSA:3.40.50.740 445 620 6.6E-76 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Gene3D G3DSA:3.40.50.740 695 735 6.6E-76 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Gene3D G3DSA:3.40.50.740 93 176 6.6E-76 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 SUPERFAMILY SSF50692 791 925 8.14E-41 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Pfam PF01568 Molydopterin dinucleotide binding domain 811 919 1.3E-21 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Gene3D G3DSA:2.40.40.20 736 753 8.6E-43 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Gene3D G3DSA:2.40.40.20 787 925 8.6E-43 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 SMART SM00926 36 90 1.7E-15 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 Hamap MF_01630 Nitrate reductase [napA]. 1 925 27.533 T 23-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 PANTHER PTHR11615 717 925 1.2E-290 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 PANTHER PTHR11615 37 285 1.2E-290 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 PANTHER PTHR11615 390 635 1.2E-290 T 23-04-2016 CFF04554_RS05995 1eddb99e61895efe2af29c1683061ec4 925 SUPERFAMILY SSF53706 34 621 3.93E-165 T 23-04-2016 CFF04554_RS01675 f4e3e8e930f1abdfb1419d8bb96e5f48 207 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 175 3.3E-28 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CFF04554_RS01675 f4e3e8e930f1abdfb1419d8bb96e5f48 207 Gene3D G3DSA:3.40.50.1000 1 15 2.8E-28 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS01675 f4e3e8e930f1abdfb1419d8bb96e5f48 207 Gene3D G3DSA:3.40.50.1000 73 205 2.8E-28 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS01675 f4e3e8e930f1abdfb1419d8bb96e5f48 207 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 3 207 1.5E-65 T 23-04-2016 CFF04554_RS01675 f4e3e8e930f1abdfb1419d8bb96e5f48 207 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 176 2.4E-15 T 23-04-2016 CFF04554_RS01675 f4e3e8e930f1abdfb1419d8bb96e5f48 207 SUPERFAMILY SSF56784 1 207 3.87E-47 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS01675 f4e3e8e930f1abdfb1419d8bb96e5f48 207 Gene3D G3DSA:1.10.150.210 16 72 2.0E-16 T 23-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 CFF04554_RS01675 f4e3e8e930f1abdfb1419d8bb96e5f48 207 PANTHER PTHR10000:SF7 3 207 3.9E-47 T 23-04-2016 CFF04554_RS01675 f4e3e8e930f1abdfb1419d8bb96e5f48 207 PANTHER PTHR10000 3 207 3.9E-47 T 23-04-2016 CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 Pfam PF00072 Response regulator receiver domain 4 112 5.8E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 SUPERFAMILY SSF52172 1 162 1.24E-37 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 PANTHER PTHR26402 2 224 5.6E-68 T 23-04-2016 CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 SMART SM00862 146 222 4.2E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 7.3E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 SMART SM00448 2 112 5.6E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 SUPERFAMILY SSF46894 131 223 2.89E-20 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 PANTHER PTHR26402:SF50 2 224 5.6E-68 T 23-04-2016 CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 Gene3D G3DSA:3.40.50.2300 1 128 1.4E-38 T 23-04-2016 CFF04554_RS03830 bb5339f741d48733dbe5592715e9bbaa 224 Gene3D G3DSA:1.10.10.10 131 223 8.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 291 5.3E-108 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 SUPERFAMILY SSF51569 6 293 1.99E-91 T 23-04-2016 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 PIRSF PIRSF001365 1 295 4.9E-82 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 SMART SM01130 4 293 1.3E-129 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 4 291 62.313 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 Gene3D G3DSA:3.20.20.70 2 294 1.8E-103 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 PANTHER PTHR12128:SF34 1 294 7.9E-115 T 23-04-2016 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 2.5E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.5E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 2.5E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 2.5E-35 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 Pfam PF00701 Dihydrodipicolinate synthetase family 7 290 1.5E-87 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 PANTHER PTHR12128 1 294 7.9E-115 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CFF04554_RS03935 3fcf1cbc24eceaadceec7ca479946adb 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS04300 ac2e72874d979af9dfea73d2198896ef 553 SMART SM00382 185 321 9.0E-23 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS04300 ac2e72874d979af9dfea73d2198896ef 553 PANTHER PTHR23076 5 405 7.3E-139 T 23-04-2016 CFF04554_RS04300 ac2e72874d979af9dfea73d2198896ef 553 ProSitePatterns PS00674 AAA-protein family signature. 289 307 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CFF04554_RS04300 ac2e72874d979af9dfea73d2198896ef 553 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 318 6.4E-44 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS04300 ac2e72874d979af9dfea73d2198896ef 553 SUPERFAMILY SSF52540 147 386 1.48E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04300 ac2e72874d979af9dfea73d2198896ef 553 SUPERFAMILY SSF140990 398 548 1.22E-22 T 23-04-2016 CFF04554_RS04300 ac2e72874d979af9dfea73d2198896ef 553 Gene3D G3DSA:3.40.50.300 147 327 6.7E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04300 ac2e72874d979af9dfea73d2198896ef 553 Gene3D G3DSA:1.10.8.60 328 388 8.5E-16 T 23-04-2016 CFF04554_RS00320 3cde69eafcc8f96ca796061e7906f650 115 PANTHER PTHR21012 2 115 3.4E-55 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CFF04554_RS00320 3cde69eafcc8f96ca796061e7906f650 115 SUPERFAMILY SSF50692 1 114 4.97E-48 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain CFF04554_RS00320 3cde69eafcc8f96ca796061e7906f650 115 Pfam PF02261 Aspartate decarboxylase 1 113 2.7E-51 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CFF04554_RS00320 3cde69eafcc8f96ca796061e7906f650 115 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 92 4.0E-34 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CFF04554_RS00320 3cde69eafcc8f96ca796061e7906f650 115 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 114 1.8E-49 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CFF04554_RS00320 3cde69eafcc8f96ca796061e7906f650 115 PIRSF PIRSF006246 1 115 1.4E-48 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CFF04554_RS00320 3cde69eafcc8f96ca796061e7906f650 115 Gene3D G3DSA:2.40.40.20 1 114 1.5E-52 T 23-04-2016 CFF04554_RS00320 3cde69eafcc8f96ca796061e7906f650 115 PANTHER PTHR21012:SF0 2 115 3.4E-55 T 23-04-2016 CFF04554_RS00320 3cde69eafcc8f96ca796061e7906f650 115 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 115 63.721 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CFF04554_RS01130 e996e3fd72ea94d787bb2af6f7fd746e 217 PIRSF PIRSF015601 1 217 1.5E-31 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS01130 e996e3fd72ea94d787bb2af6f7fd746e 217 PANTHER PTHR30027 9 217 9.8E-14 T 23-04-2016 CFF04554_RS01130 e996e3fd72ea94d787bb2af6f7fd746e 217 Gene3D G3DSA:3.40.1280.10 4 214 4.4E-27 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFF04554_RS01130 e996e3fd72ea94d787bb2af6f7fd746e 217 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 215 7.2E-33 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS01130 e996e3fd72ea94d787bb2af6f7fd746e 217 SUPERFAMILY SSF75217 71 215 2.03E-25 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CFF04554_RS01130 e996e3fd72ea94d787bb2af6f7fd746e 217 Pfam PF04452 RNA methyltransferase 15 214 4.0E-29 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 Gene3D G3DSA:1.10.8.60 309 374 4.9E-23 T 23-04-2016 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 Pfam PF07724 AAA domain (Cdc48 subfamily) 476 634 2.9E-40 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 640 717 1.1E-16 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 SUPERFAMILY SSF52540 434 720 1.06E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 Gene3D G3DSA:1.10.1780.10 1 123 3.0E-13 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 SMART SM01086 640 726 3.4E-20 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 50 4.8E-4 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 552 570 1.4E-32 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 523 541 1.4E-32 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 481 499 1.4E-32 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 585 599 1.4E-32 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 169 300 2.6E-17 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 SUPERFAMILY SSF52540 128 394 5.88E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 SMART SM00382 477 641 3.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 SMART SM00382 164 307 1.6E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 SUPERFAMILY SSF81923 1 121 5.36E-11 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 Gene3D G3DSA:3.40.50.300 135 306 2.4E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 PANTHER PTHR11638:SF111 1 723 2.9E-240 T 23-04-2016 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 508 526 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 PANTHER PTHR11638 1 723 2.9E-240 T 23-04-2016 CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 Gene3D G3DSA:3.40.50.300 434 650 2.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03560 ec582e867d6490df3becbc2d3d95e6dd 732 Gene3D G3DSA:1.10.8.60 651 729 1.5E-20 T 23-04-2016 CFF04554_RS00905 227445b28aab9a52e7be572049a678b7 291 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 12 286 3.5E-86 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CFF04554_RS00905 227445b28aab9a52e7be572049a678b7 291 Gene3D G3DSA:1.10.3720.10 21 289 5.2E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00905 227445b28aab9a52e7be572049a678b7 291 PANTHER PTHR30425 1 291 3.7E-106 T 23-04-2016 CFF04554_RS00905 227445b28aab9a52e7be572049a678b7 291 PANTHER PTHR30425:SF1 1 291 3.7E-106 T 23-04-2016 CFF04554_RS00905 227445b28aab9a52e7be572049a678b7 291 SUPERFAMILY SSF161098 24 276 3.18E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00905 227445b28aab9a52e7be572049a678b7 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 279 1.1E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS04490 8aa8809fdfa2e1fb6e749937ba225d27 389 Gene3D G3DSA:3.90.1150.10 271 389 3.0E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS04490 8aa8809fdfa2e1fb6e749937ba225d27 389 SUPERFAMILY SSF53383 4 387 6.19E-108 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS04490 8aa8809fdfa2e1fb6e749937ba225d27 389 Gene3D G3DSA:3.40.640.10 43 270 2.9E-69 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS04490 8aa8809fdfa2e1fb6e749937ba225d27 389 PANTHER PTHR11751 12 388 4.0E-149 T 23-04-2016 CFF04554_RS04490 8aa8809fdfa2e1fb6e749937ba225d27 389 Pfam PF00155 Aminotransferase class I and II 30 380 1.7E-67 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CFF04554_RS04490 8aa8809fdfa2e1fb6e749937ba225d27 389 PANTHER PTHR11751:SF306 12 388 4.0E-149 T 23-04-2016 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 PIRSF PIRSF000728 7 280 3.2E-106 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 SUPERFAMILY SSF53633 4 279 3.53E-86 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 Pfam PF00696 Amino acid kinase family 25 258 3.6E-45 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 Gene3D G3DSA:3.40.1160.10 23 279 4.8E-99 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 PANTHER PTHR23342 1 280 1.3E-106 T 23-04-2016 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 TIGRFAM TIGR00761 argB: acetylglutamate kinase 26 256 5.8E-79 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 Hamap MF_00082_B Acetylglutamate kinase [argB]. 22 280 35.094 T 23-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 PRINTS PR00474 Glutamate 5-kinase family signature 181 208 9.3E-7 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 9.3E-7 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CFF04554_RS05345 74c0595d71c9373c7b6f6999cfd62039 280 PRINTS PR00474 Glutamate 5-kinase family signature 231 251 9.3E-7 T 23-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CFF04554_RS06565 1affb3fc5b1232ca7983d27e72d8c4e2 110 Pfam PF04341 Protein of unknown function, DUF485 6 85 1.4E-20 T 23-04-2016 IPR007436 Protein of unknown function DUF485 CFF04554_RS06565 1affb3fc5b1232ca7983d27e72d8c4e2 110 PANTHER PTHR38598 1 96 1.7E-12 T 23-04-2016 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 PIRSF PIRSF000505 7 425 7.9E-98 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 PANTHER PTHR21090 16 424 4.0E-130 T 23-04-2016 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 9 422 28.618 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 ProSitePatterns PS00104 EPSP synthase signature 1. 85 99 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 Gene3D G3DSA:3.65.10.10 199 424 1.5E-49 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 SUPERFAMILY SSF55205 17 422 5.07E-102 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 Gene3D G3DSA:3.65.10.10 19 198 2.5E-37 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 16 421 8.0E-114 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 16 413 2.4E-108 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CFF04554_RS06445 6ef9841f32f58737008a44abe01a83ed 425 PANTHER PTHR21090:SF5 16 424 4.0E-130 T 23-04-2016 CFF04554_RS00340 e02f126ac30e1d64589dbd9bac2d23da 277 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 201 213 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CFF04554_RS00340 e02f126ac30e1d64589dbd9bac2d23da 277 Gene3D G3DSA:1.10.600.10 13 273 7.7E-76 T 23-04-2016 IPR008949 Isoprenoid synthase domain CFF04554_RS00340 e02f126ac30e1d64589dbd9bac2d23da 277 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 71 87 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CFF04554_RS00340 e02f126ac30e1d64589dbd9bac2d23da 277 PANTHER PTHR12001:SF23 28 261 4.3E-69 T 23-04-2016 CFF04554_RS00340 e02f126ac30e1d64589dbd9bac2d23da 277 Pfam PF00348 Polyprenyl synthetase 20 238 1.0E-52 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CFF04554_RS00340 e02f126ac30e1d64589dbd9bac2d23da 277 PANTHER PTHR12001 28 261 4.3E-69 T 23-04-2016 IPR017446 Polyprenyl synthetase-related CFF04554_RS00340 e02f126ac30e1d64589dbd9bac2d23da 277 SUPERFAMILY SSF48576 4 273 4.32E-71 T 23-04-2016 IPR008949 Isoprenoid synthase domain CFF04554_RS06405 03b04dd4dfa6e1e600575d31af176635 166 Gene3D G3DSA:1.10.3820.10 12 163 2.6E-23 T 23-04-2016 CFF04554_RS06405 03b04dd4dfa6e1e600575d31af176635 166 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 14 163 1.8E-22 T 23-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal CFF04554_RS06405 03b04dd4dfa6e1e600575d31af176635 166 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 15 162 3.7E-48 T 23-04-2016 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 CFF04554_RS06405 03b04dd4dfa6e1e600575d31af176635 166 SUPERFAMILY SSF48695 12 163 1.73E-31 T 23-04-2016 IPR011031 Multihaem cytochrome CFF04554_RS06405 03b04dd4dfa6e1e600575d31af176635 166 PANTHER PTHR30333 14 163 5.7E-12 T 23-04-2016 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 67 712 2.1E-81 T 23-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 Gene3D G3DSA:2.170.130.10 46 171 4.1E-27 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 162 9.5E-10 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 PANTHER PTHR32552:SF37 57 712 4.9E-144 T 23-04-2016 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 PANTHER PTHR32552:SF37 8 33 4.9E-144 T 23-04-2016 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 SUPERFAMILY SSF56935 52 712 3.02E-105 T 23-04-2016 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 Gene3D G3DSA:2.40.170.20 182 712 1.4E-104 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 PANTHER PTHR32552 57 712 4.9E-144 T 23-04-2016 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 PANTHER PTHR32552 8 33 4.9E-144 T 23-04-2016 CFF04554_RS04375 392e92e29514425f3cc36dc6f20e52de 712 Pfam PF00593 TonB dependent receptor 481 711 6.4E-25 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS00330 45bdc2edd345491c4b746e449690a99b 103 PANTHER PTHR33449 10 99 3.3E-16 T 23-04-2016 CFF04554_RS00330 45bdc2edd345491c4b746e449690a99b 103 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 6 96 1.7E-22 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CFF04554_RS00330 45bdc2edd345491c4b746e449690a99b 103 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 97 17.782 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CFF04554_RS00330 45bdc2edd345491c4b746e449690a99b 103 PIRSF PIRSF004555 3 103 6.8E-26 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CFF04554_RS00330 45bdc2edd345491c4b746e449690a99b 103 Gene3D G3DSA:3.30.1310.10 5 99 7.6E-32 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CFF04554_RS00330 45bdc2edd345491c4b746e449690a99b 103 Pfam PF02575 YbaB/EbfC DNA-binding family 14 98 4.2E-21 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CFF04554_RS00330 45bdc2edd345491c4b746e449690a99b 103 SUPERFAMILY SSF82607 7 97 2.49E-20 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CFF04554_RS04065 f4401f463de36b648393556d5a37c4e5 264 Pfam PF12697 Alpha/beta hydrolase family 28 119 2.7E-7 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CFF04554_RS04065 f4401f463de36b648393556d5a37c4e5 264 SUPERFAMILY SSF53474 6 235 7.26E-27 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CFF04554_RS04065 f4401f463de36b648393556d5a37c4e5 264 PANTHER PTHR10992 6 240 2.0E-16 T 23-04-2016 CFF04554_RS04065 f4401f463de36b648393556d5a37c4e5 264 Gene3D G3DSA:3.40.50.1820 5 234 2.4E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CFF04554_RS06035 581cd0bb9f2de34405ec08e52f8fb749 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 12 182 34.463 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 CFF04554_RS06035 581cd0bb9f2de34405ec08e52f8fb749 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 181 3.1E-66 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 CFF04554_RS06035 581cd0bb9f2de34405ec08e52f8fb749 182 Gene3D G3DSA:3.40.50.2020 9 182 3.0E-61 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS06035 581cd0bb9f2de34405ec08e52f8fb749 182 Pfam PF00156 Phosphoribosyl transferase domain 45 180 4.2E-15 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CFF04554_RS06035 581cd0bb9f2de34405ec08e52f8fb749 182 PANTHER PTHR32315 16 181 1.4E-67 T 23-04-2016 CFF04554_RS06035 581cd0bb9f2de34405ec08e52f8fb749 182 SUPERFAMILY SSF53271 15 173 1.57E-45 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS01725 b9a5a254afc8632e04f629132b053345 390 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 388 21.664 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CFF04554_RS01725 b9a5a254afc8632e04f629132b053345 390 Gene3D G3DSA:1.20.1530.10 3 388 3.1E-133 T 23-04-2016 IPR023171 Na/H antiporter domain CFF04554_RS01725 b9a5a254afc8632e04f629132b053345 390 PANTHER PTHR30341 1 383 1.3E-132 T 23-04-2016 CFF04554_RS01725 b9a5a254afc8632e04f629132b053345 390 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 381 5.5E-120 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CFF04554_RS01725 b9a5a254afc8632e04f629132b053345 390 PANTHER PTHR30341:SF0 1 383 1.3E-132 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CFF04554_RS01725 b9a5a254afc8632e04f629132b053345 390 Pfam PF06965 Na+/H+ antiporter 1 6 382 3.7E-130 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 SUPERFAMILY SSF48452 580 608 3.8E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 SUPERFAMILY SSF48452 164 349 3.8E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 SUPERFAMILY SSF48452 392 423 3.8E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 PANTHER PTHR23083 726 764 2.6E-13 T 23-04-2016 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 PANTHER PTHR23083 175 256 2.6E-13 T 23-04-2016 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 PANTHER PTHR23083 294 309 2.6E-13 T 23-04-2016 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 PANTHER PTHR23083 389 427 2.6E-13 T 23-04-2016 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 PANTHER PTHR23083 577 683 2.6E-13 T 23-04-2016 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 SUPERFAMILY SSF48452 693 764 1.19E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 SUPERFAMILY SSF48452 547 649 1.19E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 Pfam PF13181 Tetratricopeptide repeat 731 760 3.3E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 SMART SM00028 318 351 49.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 SMART SM00028 616 649 290.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 SMART SM00028 577 610 77.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 SMART SM00028 730 763 29.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 Pfam PF09976 Tetratricopeptide repeat-like domain 235 345 1.7E-7 T 23-04-2016 IPR018704 Tetratricopeptide repeat-like domain CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 Gene3D G3DSA:1.25.40.10 472 508 1.4E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 Gene3D G3DSA:1.25.40.10 168 420 1.0E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS01075 037a2b12e2a0d04daa634ab216f25ae5 778 Gene3D G3DSA:1.25.40.10 545 760 1.4E-14 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS03175 35d4ef9ebc709ddd827d998a8407cde9 168 PANTHER PTHR23089:SF16 1 147 1.9E-50 T 23-04-2016 CFF04554_RS03175 35d4ef9ebc709ddd827d998a8407cde9 168 SUPERFAMILY SSF54197 1 162 8.2E-36 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CFF04554_RS03175 35d4ef9ebc709ddd827d998a8407cde9 168 Gene3D G3DSA:3.30.428.10 20 138 1.8E-28 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CFF04554_RS03175 35d4ef9ebc709ddd827d998a8407cde9 168 PANTHER PTHR23089 1 147 1.9E-50 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CFF04554_RS03175 35d4ef9ebc709ddd827d998a8407cde9 168 Pfam PF01230 HIT domain 39 131 7.9E-9 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 Gene3D G3DSA:3.40.220.10 24 157 1.2E-15 T 23-04-2016 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 PRINTS PR00481 Cytosol aminopeptidase signature 322 342 4.3E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 PRINTS PR00481 Cytosol aminopeptidase signature 263 284 4.3E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 PRINTS PR00481 Cytosol aminopeptidase signature 300 321 4.3E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 PRINTS PR00481 Cytosol aminopeptidase signature 351 366 4.3E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 PRINTS PR00481 Cytosol aminopeptidase signature 241 258 4.3E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 326 333 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 PANTHER PTHR11963:SF13 101 484 2.6E-149 T 23-04-2016 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 483 31.901 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 SUPERFAMILY SSF52949 58 136 1.12E-9 T 23-04-2016 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 Gene3D G3DSA:3.40.630.10 158 483 1.6E-118 T 23-04-2016 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 PANTHER PTHR11963 101 484 2.6E-149 T 23-04-2016 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 64 123 1.4E-4 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 SUPERFAMILY SSF53187 158 480 6.59E-105 T 23-04-2016 CFF04554_RS06025 7a929bed5410c45e49a24c68a297ceed 490 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 163 473 2.7E-103 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 SUPERFAMILY SSF54862 41 125 1.12E-16 T 23-04-2016 CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 SUPERFAMILY SSF54862 164 217 1.12E-16 T 23-04-2016 CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 46 57 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 PANTHER PTHR30176:SF3 165 212 2.5E-15 T 23-04-2016 CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 PANTHER PTHR30176:SF3 33 126 2.5E-15 T 23-04-2016 CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 Gene3D G3DSA:3.30.70.20 149 173 1.8E-13 T 23-04-2016 CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 Gene3D G3DSA:3.30.70.20 40 103 1.8E-13 T 23-04-2016 CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 Gene3D G3DSA:3.30.70.20 174 221 6.7E-9 T 23-04-2016 CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 Pfam PF12838 4Fe-4S dicluster domain 46 100 1.4E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 PANTHER PTHR30176 165 212 2.5E-15 T 23-04-2016 CFF04554_RS02215 74500dc3a385d6e75e868edf88f7e961 224 PANTHER PTHR30176 33 126 2.5E-15 T 23-04-2016 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 Gene3D G3DSA:1.10.720.10 30 76 5.1E-17 T 23-04-2016 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 SUPERFAMILY SSF68912 30 76 5.49E-10 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 SUPERFAMILY SSF50249 78 151 4.57E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 186 389 6.0E-23 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 PANTHER PTHR15184:SF34 5 444 4.2E-177 T 23-04-2016 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 TIGRFAM TIGR00767 rho: transcription termination factor Rho 31 443 7.8E-205 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 SMART SM00382 196 387 3.5E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 SUPERFAMILY SSF52540 120 397 1.82E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 SMART SM00357 81 147 5.7E-15 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 Pfam PF07498 Rho termination factor, N-terminal domain 34 76 7.0E-14 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 Gene3D G3DSA:2.40.50.140 78 146 7.7E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 SMART SM00959 34 76 1.1E-14 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 Gene3D G3DSA:3.40.50.300 160 442 9.2E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 PANTHER PTHR15184 5 444 4.2E-177 T 23-04-2016 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 Pfam PF07497 Rho termination factor, RNA-binding domain 81 152 1.0E-27 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 CFF04554_RS07235 2f70a08c30b236feebd62378c16a8d22 444 Hamap MF_01884 Transcription termination factor Rho [rho]. 30 444 210.44 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CFF04554_RS05975 b3705cd16edd67be9346d24112450f0b 156 Gene3D G3DSA:3.30.70.20 32 74 1.3E-7 T 23-04-2016 CFF04554_RS05975 b3705cd16edd67be9346d24112450f0b 156 Gene3D G3DSA:3.30.70.20 106 153 4.5E-10 T 23-04-2016 CFF04554_RS05975 b3705cd16edd67be9346d24112450f0b 156 SUPERFAMILY SSF54862 33 150 3.91E-12 T 23-04-2016 CFF04554_RS05975 b3705cd16edd67be9346d24112450f0b 156 Gene3D G3DSA:3.30.70.20 75 105 1.2E-5 T 23-04-2016 CFF04554_RS05975 b3705cd16edd67be9346d24112450f0b 156 Pfam PF00037 4Fe-4S binding domain 128 148 1.1E-4 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS05975 b3705cd16edd67be9346d24112450f0b 156 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 PANTHER PTHR11702 2 340 2.3E-128 T 23-04-2016 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 PANTHER PTHR11702:SF3 2 340 2.3E-128 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 SUPERFAMILY SSF52540 150 341 9.68E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 Pfam PF01018 GTP1/OBG 2 157 7.9E-55 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 1.4E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 1.4E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 1.4E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 1.4E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 Gene3D G3DSA:2.70.210.12 1 155 1.6E-52 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 Gene3D G3DSA:3.40.50.300 159 340 3.3E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 Hamap MF_01454 GTPase Obg [obg]. 1 341 45.369 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 PIRSF PIRSF002401 1 340 7.3E-123 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 Pfam PF01926 50S ribosome-binding GTPase 160 271 1.3E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 SUPERFAMILY SSF82051 1 157 1.83E-52 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 CFF04554_RS07815 bfc0345421cfd8dfed2c489423c2981b 344 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 337 1.4E-122 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 7.3E-104 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 PANTHER PTHR11451 4 325 4.6E-94 T 23-04-2016 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 Gene3D G3DSA:1.10.1160.10 233 314 1.5E-33 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 Gene3D G3DSA:3.40.50.620 3 66 2.8E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 Gene3D G3DSA:3.40.50.620 181 231 2.8E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 SUPERFAMILY SSF52374 2 295 2.09E-106 T 23-04-2016 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 Gene3D G3DSA:3.90.800.10 67 180 5.6E-34 T 23-04-2016 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 SUPERFAMILY SSF48163 299 455 2.35E-33 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 PANTHER PTHR11451:SF41 4 325 4.6E-94 T 23-04-2016 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 19 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 453 9.8E-165 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 PRINTS PR00987 Glutamyl-tRNA synthetase signature 19 30 6.2E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 6.2E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 6.2E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 PRINTS PR00987 Glutamyl-tRNA synthetase signature 34 47 6.2E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 PRINTS PR00987 Glutamyl-tRNA synthetase signature 5 17 6.2E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 Gene3D G3DSA:1.10.10.350 361 455 1.9E-24 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CFF04554_RS07935 53c18a1d69976616d33f9d38e58fb5ae 460 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 2 456 31.679 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 SUPERFAMILY SSF52313 4 233 6.28E-94 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 156 180 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 Gene3D G3DSA:1.10.287.610 98 150 5.1E-22 T 23-04-2016 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 Pfam PF00318 Ribosomal protein S2 7 222 2.6E-95 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 224 2.3E-109 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 40.127 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 Gene3D G3DSA:3.40.50.10490 21 97 2.7E-67 T 23-04-2016 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 Gene3D G3DSA:3.40.50.10490 156 246 2.7E-67 T 23-04-2016 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 PRINTS PR00395 Ribosomal protein S2 signature 85 102 1.8E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 PRINTS PR00395 Ribosomal protein S2 signature 4 22 1.8E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 PRINTS PR00395 Ribosomal protein S2 signature 173 184 1.8E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 PRINTS PR00395 Ribosomal protein S2 signature 35 44 1.8E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 PRINTS PR00395 Ribosomal protein S2 signature 156 173 1.8E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 PRINTS PR00395 Ribosomal protein S2 signature 194 208 1.8E-37 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07345 dfa6a938921dc938a101aca1f6ff20ed 258 PANTHER PTHR12534 1 257 3.5E-113 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CFF04554_RS01245 9efc1274227ea469d7aade5f9276ab86 149 PANTHER PTHR33603:SF1 1 149 5.0E-27 T 23-04-2016 CFF04554_RS01245 9efc1274227ea469d7aade5f9276ab86 149 Pfam PF02590 Predicted SPOUT methyltransferase 1 148 1.1E-35 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS01245 9efc1274227ea469d7aade5f9276ab86 149 PANTHER PTHR33603 1 149 5.0E-27 T 23-04-2016 CFF04554_RS01245 9efc1274227ea469d7aade5f9276ab86 149 SUPERFAMILY SSF75217 1 148 1.2E-35 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CFF04554_RS01245 9efc1274227ea469d7aade5f9276ab86 149 PIRSF PIRSF004505 1 149 4.6E-38 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS01245 9efc1274227ea469d7aade5f9276ab86 149 Gene3D G3DSA:3.40.1280.10 1 149 5.8E-38 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFF04554_RS01245 9efc1274227ea469d7aade5f9276ab86 149 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 149 21.602 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS06765 67749cd53970fba24d9dfc9699677e62 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 18.331 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06765 67749cd53970fba24d9dfc9699677e62 55 Pfam PF00471 Ribosomal protein L33 7 53 3.4E-21 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06765 67749cd53970fba24d9dfc9699677e62 55 PANTHER PTHR15238 5 53 1.3E-19 T 23-04-2016 CFF04554_RS06765 67749cd53970fba24d9dfc9699677e62 55 SUPERFAMILY SSF57829 2 53 2.14E-19 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CFF04554_RS06765 67749cd53970fba24d9dfc9699677e62 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06765 67749cd53970fba24d9dfc9699677e62 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 5 55 1.0E-23 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06765 67749cd53970fba24d9dfc9699677e62 55 PANTHER PTHR15238:SF3 5 53 1.3E-19 T 23-04-2016 CFF04554_RS04230 c6197cf8e2a572897f62289ae98718b7 354 PANTHER PTHR30349:SF5 87 342 1.4E-37 T 23-04-2016 CFF04554_RS04230 c6197cf8e2a572897f62289ae98718b7 354 SUPERFAMILY SSF56349 162 348 4.12E-42 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CFF04554_RS04230 c6197cf8e2a572897f62289ae98718b7 354 Pfam PF00589 Phage integrase family 167 336 2.6E-33 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CFF04554_RS04230 c6197cf8e2a572897f62289ae98718b7 354 Gene3D G3DSA:1.10.443.10 167 342 2.2E-44 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CFF04554_RS04230 c6197cf8e2a572897f62289ae98718b7 354 PANTHER PTHR30349 87 342 1.4E-37 T 23-04-2016 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 432 9.8E-146 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 ProSitePatterns PS01008 DnaA protein signature. 392 411 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 SUPERFAMILY SSF52540 102 307 4.18E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 433 28.87 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 164 178 1.7E-40 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 257 1.7E-40 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 392 411 1.7E-40 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 196 210 1.7E-40 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 134 154 1.7E-40 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 PANTHER PTHR30050 4 435 4.4E-162 T 23-04-2016 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 344 411 2.6E-23 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 Pfam PF00308 Bacterial dnaA protein 101 315 2.0E-84 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 PANTHER PTHR30050:SF2 4 435 4.4E-162 T 23-04-2016 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 Gene3D G3DSA:1.10.1750.10 334 434 2.2E-31 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 SMART SM00382 133 259 2.4E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 SMART SM00760 342 411 1.4E-27 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 Gene3D G3DSA:1.10.8.60 265 333 4.5E-22 T 23-04-2016 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 Pfam PF11638 DnaA N-terminal domain 5 64 3.1E-7 T 23-04-2016 IPR024633 DnaA N-terminal domain CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 SUPERFAMILY SSF48295 329 433 4.97E-30 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 CFF04554_RS00005 441cf29fbbc1028fd99eedf687c7ae49 436 Gene3D G3DSA:3.40.50.300 94 263 1.1E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 SUPERFAMILY SSF52172 4 120 1.02E-30 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 SUPERFAMILY SSF46894 127 217 1.19E-22 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 PANTHER PTHR26402 3 217 1.1E-58 T 23-04-2016 CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 217 2.0E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 Gene3D G3DSA:1.10.10.10 124 217 5.1E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 SMART SM00448 3 114 9.3E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 Pfam PF00072 Response regulator receiver domain 5 115 3.6E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 SMART SM00862 146 217 4.9E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 Gene3D G3DSA:3.40.50.2300 3 123 2.9E-31 T 23-04-2016 CFF04554_RS02660 f7f9227573e54d049bf0df7b237312dd 218 PANTHER PTHR26402:SF292 3 217 1.1E-58 T 23-04-2016 CFF04554_RS05035 36b92d579caff4ca3ac4b998fe276470 292 SUPERFAMILY SSF53067 3 113 2.69E-16 T 23-04-2016 CFF04554_RS05035 36b92d579caff4ca3ac4b998fe276470 292 Gene3D G3DSA:3.30.420.40 4 114 2.9E-17 T 23-04-2016 CFF04554_RS05035 36b92d579caff4ca3ac4b998fe276470 292 PANTHER PTHR30005 3 281 2.1E-23 T 23-04-2016 CFF04554_RS05035 36b92d579caff4ca3ac4b998fe276470 292 SUPERFAMILY SSF53067 124 281 2.33E-19 T 23-04-2016 CFF04554_RS05035 36b92d579caff4ca3ac4b998fe276470 292 Gene3D G3DSA:3.30.420.150 124 282 8.6E-22 T 23-04-2016 CFF04554_RS05035 36b92d579caff4ca3ac4b998fe276470 292 Pfam PF02541 Ppx/GppA phosphatase family 42 282 2.5E-25 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CFF04554_RS07865 231bf8029dcaf0b084299e43c2c219b9 442 PANTHER PTHR32328:SF0 1 442 1.1E-143 T 23-04-2016 CFF04554_RS07865 231bf8029dcaf0b084299e43c2c219b9 442 Gene3D G3DSA:3.40.640.10 128 309 4.4E-24 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS07865 231bf8029dcaf0b084299e43c2c219b9 442 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 6 437 1.3E-154 T 23-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CFF04554_RS07865 231bf8029dcaf0b084299e43c2c219b9 442 PANTHER PTHR32328 1 442 1.1E-143 T 23-04-2016 CFF04554_RS07865 231bf8029dcaf0b084299e43c2c219b9 442 SUPERFAMILY SSF53383 70 437 6.64E-40 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS07865 231bf8029dcaf0b084299e43c2c219b9 442 Pfam PF03841 L-seryl-tRNA selenium transferase 72 424 5.5E-134 T 23-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CFF04554_RS07865 231bf8029dcaf0b084299e43c2c219b9 442 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 442 167.376 T 23-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CFF04554_RS04215 58865178228b8dd10a0b55e1887bd1ec 222 SMART SM00862 149 220 4.4E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS04215 58865178228b8dd10a0b55e1887bd1ec 222 SMART SM00448 2 113 1.6E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS04215 58865178228b8dd10a0b55e1887bd1ec 222 PANTHER PTHR26402 2 221 2.7E-52 T 23-04-2016 CFF04554_RS04215 58865178228b8dd10a0b55e1887bd1ec 222 PANTHER PTHR26402:SF606 2 221 2.7E-52 T 23-04-2016 CFF04554_RS04215 58865178228b8dd10a0b55e1887bd1ec 222 SUPERFAMILY SSF52172 2 176 1.71E-30 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS04215 58865178228b8dd10a0b55e1887bd1ec 222 Gene3D G3DSA:3.40.50.2300 2 120 1.4E-29 T 23-04-2016 CFF04554_RS04215 58865178228b8dd10a0b55e1887bd1ec 222 Pfam PF00072 Response regulator receiver domain 4 113 6.9E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS04215 58865178228b8dd10a0b55e1887bd1ec 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 218 6.2E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS04215 58865178228b8dd10a0b55e1887bd1ec 222 Gene3D G3DSA:1.10.10.10 133 219 1.3E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 Gene3D G3DSA:1.20.1640.10 294 507 2.2E-57 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 Gene3D G3DSA:1.10.3850.10 815 1028 2.0E-57 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82714 723 808 1.83E-20 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82693 40 132 1.6E-23 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82693 674 722 1.45E-23 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 Pfam PF00873 AcrB/AcrD/AcrF family 2 1027 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82714 184 274 6.54E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 Gene3D G3DSA:3.30.70.1430 40 139 2.3E-28 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82693 809 858 1.45E-23 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1029 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82866 298 501 4.05E-49 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 Gene3D G3DSA:3.30.2090.10 723 807 9.0E-23 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 Gene3D G3DSA:3.30.70.1430 567 672 3.4E-20 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82693 565 672 1.94E-18 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.1E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.1E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 2.1E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.1E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.1E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.1E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 2.1E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.1E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.1E-89 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PANTHER PTHR32063 1 1038 0.0 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 PANTHER PTHR32063:SF27 1 1038 0.0 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82693 137 183 3.31E-23 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82693 276 332 3.31E-23 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 SUPERFAMILY SSF82866 832 1027 1.07E-45 T 23-04-2016 CFF04554_RS00595 320a3a251d2dd161efe94f8f83c07705 1048 Gene3D G3DSA:3.30.2090.10 183 277 3.8E-24 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFF04554_RS08340 b93275b6832876d3ea77158d0e819cda 241 Gene3D G3DSA:3.30.1150.10 139 241 1.7E-11 T 23-04-2016 CFF04554_RS08340 b93275b6832876d3ea77158d0e819cda 241 SUPERFAMILY SSF74653 146 241 6.02E-14 T 23-04-2016 CFF04554_RS08340 b93275b6832876d3ea77158d0e819cda 241 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 168 240 3.0E-15 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CFF04554_RS08340 b93275b6832876d3ea77158d0e819cda 241 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 168 241 7.3E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CFF04554_RS03690 d9c8bb0e2d5e6844fc27ed815157bd11 296 Pfam PF01551 Peptidase family M23 161 258 8.0E-32 T 23-04-2016 IPR016047 Peptidase M23 CFF04554_RS03690 d9c8bb0e2d5e6844fc27ed815157bd11 296 SUPERFAMILY SSF51261 52 262 1.31E-53 T 23-04-2016 IPR011055 Duplicated hybrid motif CFF04554_RS03690 d9c8bb0e2d5e6844fc27ed815157bd11 296 Gene3D G3DSA:2.70.70.10 143 263 1.3E-43 T 23-04-2016 CFF04554_RS03690 d9c8bb0e2d5e6844fc27ed815157bd11 296 PANTHER PTHR21666 45 272 4.8E-45 T 23-04-2016 CFF04554_RS04350 f861cb9d1b39840a63f5683a451f1cbc 169 SUPERFAMILY SSF54523 2 161 2.2E-13 T 23-04-2016 CFF04554_RS04350 f861cb9d1b39840a63f5683a451f1cbc 169 Gene3D G3DSA:3.30.700.10 2 72 1.4E-6 T 23-04-2016 CFF04554_RS05445 c12f50d0fe802bff0b7fc47c96b14062 211 PANTHER PTHR10000:SF10 2 198 3.8E-34 T 23-04-2016 CFF04554_RS05445 c12f50d0fe802bff0b7fc47c96b14062 211 Gene3D G3DSA:3.40.50.1000 79 201 6.8E-31 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS05445 c12f50d0fe802bff0b7fc47c96b14062 211 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 183 1.9E-19 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CFF04554_RS05445 c12f50d0fe802bff0b7fc47c96b14062 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 181 4.0E-30 T 23-04-2016 CFF04554_RS05445 c12f50d0fe802bff0b7fc47c96b14062 211 Gene3D G3DSA:1.20.1440.100 15 78 1.0E-12 T 23-04-2016 CFF04554_RS05445 c12f50d0fe802bff0b7fc47c96b14062 211 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 193 3.7E-34 T 23-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CFF04554_RS05445 c12f50d0fe802bff0b7fc47c96b14062 211 PANTHER PTHR10000 2 198 3.8E-34 T 23-04-2016 CFF04554_RS05445 c12f50d0fe802bff0b7fc47c96b14062 211 SUPERFAMILY SSF56784 3 198 4.82E-20 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS02275 cc8028b11c27af9c90ab8644110dd01e 141 Gene3D G3DSA:1.10.760.10 26 140 1.8E-39 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS02275 cc8028b11c27af9c90ab8644110dd01e 141 Pfam PF09086 Domain of unknown function (DUF1924) 44 138 1.8E-35 T 23-04-2016 IPR015170 Protein of unknown function DUF1924 CFF04554_RS02275 cc8028b11c27af9c90ab8644110dd01e 141 SUPERFAMILY SSF46626 42 140 6.48E-25 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 SUPERFAMILY SSF52172 186 312 1.71E-25 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 SMART SM00260 11 162 9.7E-38 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 Gene3D G3DSA:3.40.50.2300 187 314 2.8E-26 T 23-04-2016 CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 PIRSF PIRSF002867 1 314 6.3E-97 T 23-04-2016 IPR024181 Chemotaxis response regulator CheV CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 Pfam PF00072 Response regulator receiver domain 187 304 2.2E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 Gene3D G3DSA:2.30.30.40 101 147 5.1E-7 T 23-04-2016 CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 Gene3D G3DSA:2.40.50.180 62 100 2.2E-5 T 23-04-2016 CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 SMART SM00448 184 307 4.3E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 Pfam PF01584 CheW-like domain 31 164 4.0E-34 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 SUPERFAMILY SSF50341 10 165 1.57E-29 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CFF04554_RS01660 e48f1e77763d2078855feaa6a82b3c47 318 PANTHER PTHR22617 33 178 7.5E-28 T 23-04-2016 CFF04554_RS02230 d86d2f958189efc5f282330ab605d30f 298 Pfam PF13237 4Fe-4S dicluster domain 229 283 8.6E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS02230 d86d2f958189efc5f282330ab605d30f 298 PANTHER PTHR30176 15 293 1.9E-25 T 23-04-2016 CFF04554_RS02230 d86d2f958189efc5f282330ab605d30f 298 PANTHER PTHR30176:SF2 15 293 1.9E-25 T 23-04-2016 CFF04554_RS02230 d86d2f958189efc5f282330ab605d30f 298 Gene3D G3DSA:3.30.70.20 201 294 8.3E-15 T 23-04-2016 CFF04554_RS02230 d86d2f958189efc5f282330ab605d30f 298 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 32 291 1.2E-107 T 23-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 CFF04554_RS02230 d86d2f958189efc5f282330ab605d30f 298 SUPERFAMILY SSF54862 101 122 5.76E-20 T 23-04-2016 CFF04554_RS02230 d86d2f958189efc5f282330ab605d30f 298 SUPERFAMILY SSF54862 160 293 5.76E-20 T 23-04-2016 CFF04554_RS02230 d86d2f958189efc5f282330ab605d30f 298 Pfam PF12801 4Fe-4S binding domain 186 228 1.8E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS02230 d86d2f958189efc5f282330ab605d30f 298 Pfam PF12801 4Fe-4S binding domain 89 132 3.0E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS06600 462c4528ecd350a279895d1e0ff6c74a 108 PANTHER PTHR36116:SF1 1 105 2.1E-31 T 23-04-2016 CFF04554_RS06600 462c4528ecd350a279895d1e0ff6c74a 108 PANTHER PTHR36116 1 105 2.1E-31 T 23-04-2016 CFF04554_RS06600 462c4528ecd350a279895d1e0ff6c74a 108 SUPERFAMILY SSF103481 8 106 2.62E-9 T 23-04-2016 CFF04554_RS06600 462c4528ecd350a279895d1e0ff6c74a 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 106 1.7E-26 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CFF04554_RS06600 462c4528ecd350a279895d1e0ff6c74a 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 107 19.665 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 9 426 6.8E-119 T 23-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 Gene3D G3DSA:2.40.50.100 275 310 1.0E-15 T 23-04-2016 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 Gene3D G3DSA:2.40.50.100 52 82 1.0E-15 T 23-04-2016 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PANTHER PTHR30386 137 427 3.4E-98 T 23-04-2016 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PANTHER PTHR30386 10 103 3.4E-98 T 23-04-2016 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 323 347 4.67E-59 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 290 311 4.67E-59 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 391 406 4.67E-59 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 347 370 4.67E-59 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 406 426 4.67E-59 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 60 80 4.67E-59 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 18 41 4.67E-59 T 23-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 Pfam PF13437 HlyD family secretion protein 278 378 2.1E-16 T 23-04-2016 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 Pfam PF13533 Biotin-lipoyl like 58 93 2.1E-8 T 23-04-2016 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PANTHER PTHR30386:SF3 137 427 3.4E-98 T 23-04-2016 CFF04554_RS02300 a522d4e775b51ee1aa63b26f9692e8a5 427 PANTHER PTHR30386:SF3 10 103 3.4E-98 T 23-04-2016 CFF04554_RS06240 eb33627b9ffa399cdbeb8f6b43718a7e 370 PANTHER PTHR32332:SF18 2 50 2.6E-146 T 23-04-2016 CFF04554_RS06240 eb33627b9ffa399cdbeb8f6b43718a7e 370 PANTHER PTHR32332:SF18 74 365 2.6E-146 T 23-04-2016 CFF04554_RS06240 eb33627b9ffa399cdbeb8f6b43718a7e 370 Pfam PF03060 Nitronate monooxygenase 5 365 2.7E-84 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CFF04554_RS06240 eb33627b9ffa399cdbeb8f6b43718a7e 370 Gene3D G3DSA:3.20.20.70 335 361 5.5E-50 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS06240 eb33627b9ffa399cdbeb8f6b43718a7e 370 Gene3D G3DSA:3.20.20.70 7 297 5.5E-50 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS06240 eb33627b9ffa399cdbeb8f6b43718a7e 370 SUPERFAMILY SSF51412 334 367 5.65E-49 T 23-04-2016 CFF04554_RS06240 eb33627b9ffa399cdbeb8f6b43718a7e 370 SUPERFAMILY SSF51412 6 298 5.65E-49 T 23-04-2016 CFF04554_RS06240 eb33627b9ffa399cdbeb8f6b43718a7e 370 PANTHER PTHR32332 2 50 2.6E-146 T 23-04-2016 CFF04554_RS06240 eb33627b9ffa399cdbeb8f6b43718a7e 370 PANTHER PTHR32332 74 365 2.6E-146 T 23-04-2016 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 1.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 1.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 1.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 1.2E-11 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 PANTHER PTHR22617:SF6 1 644 1.9E-221 T 23-04-2016 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Pfam PF01584 CheW-like domain 502 630 8.9E-24 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 PANTHER PTHR22617 1 644 1.9E-221 T 23-04-2016 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SUPERFAMILY SSF47384 242 310 1.1E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SUPERFAMILY SSF50341 496 627 9.81E-33 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Pfam PF01627 Hpt domain 6 97 3.6E-16 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SUPERFAMILY SSF47226 3 113 8.37E-31 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SMART SM00260 489 628 2.0E-40 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 242 309 1.5E-16 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 496 7.7E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SUPERFAMILY SSF55874 311 495 1.3E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SMART SM00387 354 497 2.1E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Gene3D G3DSA:2.40.50.180 521 583 7.0E-16 T 23-04-2016 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Gene3D G3DSA:1.20.120.160 1 144 1.0E-43 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SMART SM00448 657 772 3.0E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Pfam PF00072 Response regulator receiver domain 659 772 7.8E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Gene3D G3DSA:3.30.565.10 311 496 2.3E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SMART SM00073 4 101 1.0E-29 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Gene3D G3DSA:3.40.50.2300 655 775 4.5E-36 T 23-04-2016 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SMART SM01231 241 309 2.9E-18 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Gene3D G3DSA:2.30.30.40 497 518 3.6E-23 T 23-04-2016 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Gene3D G3DSA:2.30.30.40 584 627 3.6E-23 T 23-04-2016 CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 SUPERFAMILY SSF52172 655 777 2.56E-35 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS01665 9afb076711f99e1004718b2356d16756 779 Gene3D G3DSA:1.10.287.560 241 310 1.6E-18 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CFF04554_RS00700 6e78fe872ccca43673c755088e8aa4d3 229 PANTHER PTHR26402:SF578 13 224 1.6E-40 T 23-04-2016 CFF04554_RS00700 6e78fe872ccca43673c755088e8aa4d3 229 SMART SM00448 13 124 3.2E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS00700 6e78fe872ccca43673c755088e8aa4d3 229 Gene3D G3DSA:3.40.50.2300 10 138 2.2E-30 T 23-04-2016 CFF04554_RS00700 6e78fe872ccca43673c755088e8aa4d3 229 SMART SM00862 155 225 7.4E-11 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS00700 6e78fe872ccca43673c755088e8aa4d3 229 PANTHER PTHR26402 13 224 1.6E-40 T 23-04-2016 CFF04554_RS00700 6e78fe872ccca43673c755088e8aa4d3 229 Gene3D G3DSA:1.10.10.10 140 225 6.3E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS00700 6e78fe872ccca43673c755088e8aa4d3 229 SUPERFAMILY SSF52172 11 176 8.4E-33 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS00700 6e78fe872ccca43673c755088e8aa4d3 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 224 4.4E-11 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS00700 6e78fe872ccca43673c755088e8aa4d3 229 Pfam PF00072 Response regulator receiver domain 15 121 3.3E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS02795 e965f2fc4e98675591744c5e3ecbfd37 290 PANTHER PTHR11825 9 281 6.2E-91 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CFF04554_RS02795 e965f2fc4e98675591744c5e3ecbfd37 290 SUPERFAMILY SSF56752 8 281 1.09E-69 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CFF04554_RS02795 e965f2fc4e98675591744c5e3ecbfd37 290 Gene3D G3DSA:3.30.470.10 9 122 3.5E-33 T 23-04-2016 CFF04554_RS02795 e965f2fc4e98675591744c5e3ecbfd37 290 Pfam PF01063 Amino-transferase class IV 36 255 9.9E-40 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CFF04554_RS02795 e965f2fc4e98675591744c5e3ecbfd37 290 PANTHER PTHR11825:SF38 9 281 6.2E-91 T 23-04-2016 CFF04554_RS02795 e965f2fc4e98675591744c5e3ecbfd37 290 Gene3D G3DSA:3.20.10.10 129 284 1.3E-41 T 23-04-2016 CFF04554_RS07640 82512773e1976d86983a002903926992 757 PANTHER PTHR12815 668 757 1.1E-129 T 23-04-2016 CFF04554_RS07640 82512773e1976d86983a002903926992 757 PANTHER PTHR12815 1 651 1.1E-129 T 23-04-2016 CFF04554_RS07640 82512773e1976d86983a002903926992 757 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 757 20.678 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CFF04554_RS07640 82512773e1976d86983a002903926992 757 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 19 757 2.3E-191 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CFF04554_RS07640 82512773e1976d86983a002903926992 757 Pfam PF07244 Surface antigen variable number repeat 87 163 1.1E-9 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CFF04554_RS07640 82512773e1976d86983a002903926992 757 Pfam PF07244 Surface antigen variable number repeat 262 339 2.2E-7 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CFF04554_RS07640 82512773e1976d86983a002903926992 757 Pfam PF07244 Surface antigen variable number repeat 344 415 6.1E-9 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 CFF04554_RS07640 82512773e1976d86983a002903926992 757 Pfam PF01103 Surface antigen 443 757 2.1E-64 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 CFF04554_RS07640 82512773e1976d86983a002903926992 757 Gene3D G3DSA:2.40.160.50 431 757 2.3E-21 T 23-04-2016 CFF04554_RS07640 82512773e1976d86983a002903926992 757 PANTHER PTHR12815:SF11 668 757 1.1E-129 T 23-04-2016 CFF04554_RS07640 82512773e1976d86983a002903926992 757 PANTHER PTHR12815:SF11 1 651 1.1E-129 T 23-04-2016 CFF04554_RS07640 82512773e1976d86983a002903926992 757 PIRSF PIRSF006076 1 757 3.6E-193 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CFF04554_RS01290 b051f34ab209209fad38a8b22518478a 327 PANTHER PTHR32347:SF12 38 326 4.3E-47 T 23-04-2016 CFF04554_RS01290 b051f34ab209209fad38a8b22518478a 327 Pfam PF13437 HlyD family secretion protein 205 315 1.1E-11 T 23-04-2016 CFF04554_RS01290 b051f34ab209209fad38a8b22518478a 327 Gene3D G3DSA:2.40.50.100 202 233 2.2E-8 T 23-04-2016 CFF04554_RS01290 b051f34ab209209fad38a8b22518478a 327 Gene3D G3DSA:2.40.50.100 42 75 2.2E-8 T 23-04-2016 CFF04554_RS01290 b051f34ab209209fad38a8b22518478a 327 PANTHER PTHR32347 38 326 4.3E-47 T 23-04-2016 CFF04554_RS01290 b051f34ab209209fad38a8b22518478a 327 SUPERFAMILY SSF111369 110 168 4.45E-5 T 23-04-2016 CFF04554_RS06815 7f764cdb34257ae1d9764073f632385b 156 SUPERFAMILY SSF52121 6 154 3.14E-57 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS06815 7f764cdb34257ae1d9764073f632385b 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 151 1.9E-51 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS06815 7f764cdb34257ae1d9764073f632385b 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.52 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS06815 7f764cdb34257ae1d9764073f632385b 156 Gene3D G3DSA:3.40.50.960 4 154 4.0E-58 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS06815 7f764cdb34257ae1d9764073f632385b 156 PANTHER PTHR21058 1 156 2.0E-69 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS06815 7f764cdb34257ae1d9764073f632385b 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 3.4E-55 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS01375 b6da7b1641bf61655025ddb3f30b4415 150 SUPERFAMILY SSF56935 3 150 1.62E-24 T 23-04-2016 CFF04554_RS01375 b6da7b1641bf61655025ddb3f30b4415 150 Pfam PF00593 TonB dependent receptor 8 149 1.3E-15 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS01375 b6da7b1641bf61655025ddb3f30b4415 150 Gene3D G3DSA:2.40.170.20 3 150 6.8E-26 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS03910 1fcf237f99a23987c5cacc0df6c2212d 248 SMART SM00382 26 219 6.8E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS03910 1fcf237f99a23987c5cacc0df6c2212d 248 Gene3D G3DSA:3.40.50.300 1 242 2.3E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03910 1fcf237f99a23987c5cacc0df6c2212d 248 Pfam PF00005 ABC transporter 17 171 9.8E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS03910 1fcf237f99a23987c5cacc0df6c2212d 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS03910 1fcf237f99a23987c5cacc0df6c2212d 248 PANTHER PTHR24220 3 242 4.7E-114 T 23-04-2016 CFF04554_RS03910 1fcf237f99a23987c5cacc0df6c2212d 248 PANTHER PTHR24220:SF327 3 242 4.7E-114 T 23-04-2016 CFF04554_RS03910 1fcf237f99a23987c5cacc0df6c2212d 248 PIRSF PIRSF039085 1 247 1.6E-96 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CFF04554_RS03910 1fcf237f99a23987c5cacc0df6c2212d 248 SUPERFAMILY SSF52540 1 239 2.1E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 416 177.14 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 Gene3D G3DSA:3.90.170.10 262 416 4.5E-62 T 23-04-2016 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 Pfam PF00709 Adenylosuccinate synthetase 6 414 1.9E-163 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 129 140 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 7 415 1.1E-161 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 SUPERFAMILY SSF52540 3 415 6.8E-155 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 Gene3D G3DSA:1.10.300.10 98 190 3.2E-23 T 23-04-2016 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 SMART SM00788 4 415 8.5E-246 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 Gene3D G3DSA:3.40.440.10 191 261 1.1E-67 T 23-04-2016 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 Gene3D G3DSA:3.40.440.10 3 94 1.1E-67 T 23-04-2016 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CFF04554_RS01855 55d95c446efe1ed4963e11737b14fc6f 416 PANTHER PTHR11846 1 416 4.5E-208 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 Pfam PF01541 GIY-YIG catalytic domain 13 95 8.4E-9 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 Gene3D G3DSA:3.40.1440.10 11 98 7.3E-13 T 23-04-2016 IPR027299 GIY-YIG domain CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 SUPERFAMILY SSF47781 518 598 7.94E-9 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 SMART SM00465 12 100 4.1E-20 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 599 21.814 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 SUPERFAMILY SSF82771 12 102 2.09E-20 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 PANTHER PTHR30562 2 600 1.4E-141 T 23-04-2016 CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 SUPERFAMILY SSF46600 202 238 7.19E-7 T 23-04-2016 IPR001943 UVR domain GO:0005515 CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 Gene3D G3DSA:1.10.150.20 562 598 1.1E-6 T 23-04-2016 CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 382 536 2.8E-34 T 23-04-2016 IPR001162 UvrC family homology region CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 4 582 3.6E-141 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 Gene3D G3DSA:4.10.860.10 182 239 9.0E-10 T 23-04-2016 IPR001943 UVR domain GO:0005515 CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 Pfam PF02151 UvrB/uvrC motif 204 236 1.2E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 CFF04554_RS06515 3e96ff735e6d09abd93fa5856e244078 602 PANTHER PTHR30562:SF1 2 600 1.4E-141 T 23-04-2016 CFF04554_RS06340 9e9823364b406b86b16d19432992bfa4 239 SUPERFAMILY SSF161098 38 221 3.14E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS06340 9e9823364b406b86b16d19432992bfa4 239 PANTHER PTHR30614 46 239 4.2E-68 T 23-04-2016 CFF04554_RS06340 9e9823364b406b86b16d19432992bfa4 239 PANTHER PTHR30614:SF15 46 239 4.2E-68 T 23-04-2016 CFF04554_RS06340 9e9823364b406b86b16d19432992bfa4 239 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 57 236 2.6E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS06340 9e9823364b406b86b16d19432992bfa4 239 Gene3D G3DSA:1.10.3720.10 35 237 2.5E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS06340 9e9823364b406b86b16d19432992bfa4 239 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 39 131 2.4E-19 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CFF04554_RS02065 660f42e525f05be7648e1de88e969703 396 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 22 396 39.568 T 23-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CFF04554_RS02065 660f42e525f05be7648e1de88e969703 396 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 173 214 7.4E-14 T 23-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CFF04554_RS02065 660f42e525f05be7648e1de88e969703 396 Gene3D G3DSA:2.160.10.10 222 396 7.1E-33 T 23-04-2016 CFF04554_RS02065 660f42e525f05be7648e1de88e969703 396 SUPERFAMILY SSF51161 133 378 1.52E-34 T 23-04-2016 IPR011004 Trimeric LpxA-like CFF04554_RS02065 660f42e525f05be7648e1de88e969703 396 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 7 171 2.4E-60 T 23-04-2016 CFF04554_RS02065 660f42e525f05be7648e1de88e969703 396 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 298 329 6.7E-13 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS02065 660f42e525f05be7648e1de88e969703 396 Gene3D G3DSA:3.30.60.70 173 214 9.0E-18 T 23-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 443 8.3E-157 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 SUPERFAMILY SSF53271 239 445 7.67E-64 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 445 44.447 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 PANTHER PTHR11907:SF0 1 443 4.9E-210 T 23-04-2016 CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 PIRSF PIRSF000485 1 446 9.1E-164 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 Pfam PF13537 Glutamine amidotransferase domain 71 199 4.0E-20 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 SUPERFAMILY SSF56235 2 221 6.26E-63 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 Pfam PF00156 Phosphoribosyl transferase domain 260 373 6.2E-11 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 Gene3D G3DSA:3.60.20.10 2 246 3.3E-61 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 PANTHER PTHR11907 1 443 4.9E-210 T 23-04-2016 CFF04554_RS01490 7e1b35c8de850347bfefb7e5467f27ec 446 Gene3D G3DSA:3.40.50.2020 259 425 1.1E-42 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 582 634 2.9E-5 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 SUPERFAMILY SSF50974 49 515 2.09E-86 T 23-04-2016 IPR011045 Nitrous oxide reductase, N-terminal CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 45 642 2.1E-256 T 23-04-2016 IPR026468 Nitrous-oxide reductase, Sec-dependent CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 SUPERFAMILY SSF49503 476 654 6.47E-27 T 23-04-2016 IPR008972 Cupredoxin CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 SUPERFAMILY SSF46626 762 860 8.34E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 PANTHER PTHR22888 540 681 1.9E-23 T 23-04-2016 CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 Gene3D G3DSA:1.10.760.10 770 856 6.9E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 Pfam PF00034 Cytochrome c 770 856 3.7E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 Gene3D G3DSA:2.130.10.10 94 524 4.9E-114 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 PANTHER PTHR22888:SF3 540 681 1.9E-23 T 23-04-2016 CFF04554_RS02200 88158c57fdb805343d7783f60feade9f 864 Gene3D G3DSA:2.60.40.420 534 640 3.1E-39 T 23-04-2016 IPR008972 Cupredoxin CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PANTHER PTHR24093 85 785 1.7E-161 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 Gene3D G3DSA:3.30.70.100 85 152 2.0E-13 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 Pfam PF00122 E1-E2 ATPase 271 491 4.7E-53 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 Pfam PF00702 haloacid dehalogenase-like hydrolase 498 694 1.1E-27 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 SUPERFAMILY SSF55008 80 156 2.88E-17 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 239 781 9.2E-144 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 Gene3D G3DSA:3.40.50.1000 473 516 2.9E-41 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 Gene3D G3DSA:3.40.50.1000 602 749 2.9E-41 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 SUPERFAMILY SSF81665 267 304 1.7E-13 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 SUPERFAMILY SSF81665 401 494 1.7E-13 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 SUPERFAMILY SSF81665 730 768 1.7E-13 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 704 716 1.2E-18 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 350 364 1.2E-18 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 500 514 1.2E-18 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 681 700 1.2E-18 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 629 639 1.2E-18 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00942 Copper-transporting ATPase 1 signature 222 247 9.9E-7 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00942 Copper-transporting ATPase 1 signature 108 129 9.9E-7 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00942 Copper-transporting ATPase 1 signature 202 222 9.9E-7 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PANTHER PTHR24093:SF50 85 785 1.7E-161 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 Pfam PF00403 Heavy-metal-associated domain 89 147 7.4E-8 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00943 Copper-transporting ATPase signature 270 289 2.9E-10 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00943 Copper-transporting ATPase signature 423 437 2.9E-10 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00943 Copper-transporting ATPase signature 715 729 2.9E-10 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00943 Copper-transporting ATPase signature 659 676 2.9E-10 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00943 Copper-transporting ATPase signature 129 149 2.9E-10 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 PRINTS PR00943 Copper-transporting ATPase signature 483 498 2.9E-10 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 6 75 5.9E-9 T 23-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 SUPERFAMILY SSF56784 550 780 6.37E-45 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 SUPERFAMILY SSF56784 499 518 6.37E-45 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 SUPERFAMILY SSF81653 306 399 3.01E-16 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 Gene3D G3DSA:2.70.150.10 250 401 8.8E-21 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 221 784 3.1E-145 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 271 783 8.9E-106 T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 ProSitePatterns PS01229 Hypothetical cof family signature 2. 681 703 - T 23-04-2016 CFF04554_RS07225 d774318b1a5c30a5934cb472d4ef8725 789 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 272 765 3.4E-77 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CFF04554_RS06500 09195cffc6880d6b83c75e5ee77e427b 157 Pfam PF03167 Uracil DNA glycosylase superfamily 10 149 2.4E-10 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS06500 09195cffc6880d6b83c75e5ee77e427b 157 SMART SM00986 7 153 2.5E-6 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS06500 09195cffc6880d6b83c75e5ee77e427b 157 SMART SM00987 7 153 2.5E-6 T 23-04-2016 CFF04554_RS06500 09195cffc6880d6b83c75e5ee77e427b 157 Gene3D G3DSA:3.40.470.10 5 156 4.2E-35 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS06500 09195cffc6880d6b83c75e5ee77e427b 157 SUPERFAMILY SSF52141 5 155 2.03E-30 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS06500 09195cffc6880d6b83c75e5ee77e427b 157 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 6 149 4.9E-33 T 23-04-2016 IPR026353 Hypoxanthine-DNA glycosylase CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 Gene3D G3DSA:3.30.70.240 397 479 2.0E-29 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 PANTHER PTHR23115 2 599 3.9E-271 T 23-04-2016 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 Pfam PF00679 Elongation factor G C-terminus 395 478 2.6E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 5.6E-56 T 23-04-2016 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 SUPERFAMILY SSF50447 178 300 3.06E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 135 1.1E-24 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 PRINTS PR00315 GTP-binding elongation factor signature 86 97 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 PRINTS PR00315 GTP-binding elongation factor signature 70 80 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 PRINTS PR00315 GTP-binding elongation factor signature 122 131 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 PRINTS PR00315 GTP-binding elongation factor signature 50 58 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 SUPERFAMILY SSF54980 302 385 7.05E-9 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 SUPERFAMILY SSF52540 2 218 3.41E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 2.3E-288 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 SUPERFAMILY SSF54980 396 510 3.79E-27 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 PANTHER PTHR23115:SF14 2 599 3.9E-271 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 Gene3D G3DSA:3.30.70.870 303 396 1.3E-26 T 23-04-2016 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 Pfam PF03144 Elongation factor Tu domain 2 218 286 1.0E-8 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 Gene3D G3DSA:2.40.50.250 480 574 3.3E-39 T 23-04-2016 CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 Gene3D G3DSA:3.40.50.300 2 204 8.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00060 353a8299950ce51a8ce281067ad1aabc 602 Gene3D G3DSA:2.40.30.10 205 302 7.1E-26 T 23-04-2016 CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 Gene3D G3DSA:3.30.63.10 42 84 2.6E-25 T 23-04-2016 CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 PANTHER PTHR23117:SF13 3 189 3.3E-71 T 23-04-2016 CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 SUPERFAMILY SSF52540 3 187 6.39E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 PANTHER PTHR23117 3 189 3.3E-71 T 23-04-2016 CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 SMART SM00382 2 139 0.0034 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 Pfam PF00625 Guanylate kinase 4 182 7.2E-44 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 SMART SM00072 2 185 2.9E-52 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 Hamap MF_00328 Guanylate kinase [gmk]. 1 185 32.984 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 182 1.2E-65 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 Gene3D G3DSA:3.40.50.300 2 41 5.4E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07315 f4ab4973cedc5f3f60ec7e093ff105d8 203 Gene3D G3DSA:3.40.50.300 85 189 2.8E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 Pfam PF12838 4Fe-4S dicluster domain 209 251 1.2E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 Gene3D G3DSA:1.10.1060.10 249 274 3.6E-8 T 23-04-2016 CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 Pfam PF13237 4Fe-4S dicluster domain 417 465 1.7E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 PANTHER PTHR24960 179 259 3.7E-19 T 23-04-2016 CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 PANTHER PTHR24960 416 549 3.7E-19 T 23-04-2016 CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 Gene3D G3DSA:3.30.70.20 208 248 3.4E-13 T 23-04-2016 CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 238 249 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 PANTHER PTHR24960:SF43 179 259 3.7E-19 T 23-04-2016 CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 PANTHER PTHR24960:SF43 416 549 3.7E-19 T 23-04-2016 CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 SUPERFAMILY SSF54862 415 537 2.09E-21 T 23-04-2016 CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 SUPERFAMILY SSF54862 201 259 2.09E-21 T 23-04-2016 CFF04554_RS07860 821b5b141158ab210d7fa080c19913b7 553 Gene3D G3DSA:3.30.70.20 412 475 6.8E-10 T 23-04-2016 CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 PANTHER PTHR12526 143 272 9.9E-73 T 23-04-2016 CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 PANTHER PTHR12526 326 443 9.9E-73 T 23-04-2016 CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 442 3.1E-146 T 23-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 PANTHER PTHR12526:SF387 143 272 9.9E-73 T 23-04-2016 CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 PANTHER PTHR12526:SF387 326 443 9.9E-73 T 23-04-2016 CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 Gene3D G3DSA:2.60.120.10 331 443 6.8E-35 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 Pfam PF00483 Nucleotidyl transferase 3 263 5.1E-51 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 Gene3D G3DSA:3.90.550.10 1 254 1.0E-76 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 SUPERFAMILY SSF53448 1 261 4.96E-57 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 Pfam PF01050 Mannose-6-phosphate isomerase 290 439 1.3E-58 T 23-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 CFF04554_RS00515 cd630c6e6314d504b661a74b116b7f1e 444 SUPERFAMILY SSF51182 169 443 2.44E-51 T 23-04-2016 IPR011051 RmlC-like cupin domain CFF04554_RS05040 a854c4cd5d3997bd7ff0e6ea323973fd 368 Gene3D G3DSA:1.10.3090.10 150 236 5.8E-19 T 23-04-2016 CFF04554_RS05040 a854c4cd5d3997bd7ff0e6ea323973fd 368 SUPERFAMILY SSF81301 14 147 3.16E-28 T 23-04-2016 CFF04554_RS05040 a854c4cd5d3997bd7ff0e6ea323973fd 368 Pfam PF01743 Poly A polymerase head domain 30 149 3.8E-19 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 CFF04554_RS05040 a854c4cd5d3997bd7ff0e6ea323973fd 368 PANTHER PTHR13734 5 229 7.0E-37 T 23-04-2016 CFF04554_RS05040 a854c4cd5d3997bd7ff0e6ea323973fd 368 Gene3D G3DSA:3.30.460.10 15 149 1.0E-28 T 23-04-2016 CFF04554_RS05040 a854c4cd5d3997bd7ff0e6ea323973fd 368 SUPERFAMILY SSF81891 150 360 4.32E-22 T 23-04-2016 CFF04554_RS05040 a854c4cd5d3997bd7ff0e6ea323973fd 368 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 190 229 7.2E-5 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CFF04554_RS02915 4c2c0baca6d801d15541a0ef51625aa3 78 PANTHER PTHR33279 1 78 1.3E-20 T 23-04-2016 CFF04554_RS02915 4c2c0baca6d801d15541a0ef51625aa3 78 SUPERFAMILY SSF64307 2 77 1.57E-23 T 23-04-2016 IPR001455 TusA-like domain CFF04554_RS02915 4c2c0baca6d801d15541a0ef51625aa3 78 Pfam PF01206 Sulfurtransferase TusA 9 77 5.8E-21 T 23-04-2016 IPR001455 TusA-like domain CFF04554_RS02915 4c2c0baca6d801d15541a0ef51625aa3 78 Gene3D G3DSA:3.30.110.40 6 77 1.9E-30 T 23-04-2016 IPR001455 TusA-like domain CFF04554_RS02915 4c2c0baca6d801d15541a0ef51625aa3 78 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 23-04-2016 IPR001455 TusA-like domain CFF04554_RS03360 07265dfc204a68eae8bcf29c5993f67d 116 PANTHER PTHR33055:SF3 3 104 3.0E-16 T 23-04-2016 CFF04554_RS03360 07265dfc204a68eae8bcf29c5993f67d 116 PANTHER PTHR33055 3 104 3.0E-16 T 23-04-2016 CFF04554_RS03360 07265dfc204a68eae8bcf29c5993f67d 116 Pfam PF02371 Transposase IS116/IS110/IS902 family 3 81 5.4E-16 T 23-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CFF04554_RS09070 e6b9d0631bd1aa492861bc093da53150 317 Gene3D G3DSA:3.10.580.10 190 313 1.4E-25 T 23-04-2016 CFF04554_RS09070 e6b9d0631bd1aa492861bc093da53150 317 PANTHER PTHR38418 2 297 4.0E-39 T 23-04-2016 CFF04554_RS09070 e6b9d0631bd1aa492861bc093da53150 317 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 308 9.4E-94 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CFF04554_RS09070 e6b9d0631bd1aa492861bc093da53150 317 SUPERFAMILY SSF53697 2 316 2.22E-55 T 23-04-2016 CFF04554_RS09070 e6b9d0631bd1aa492861bc093da53150 317 Pfam PF00571 CBS domain 196 251 0.0027 T 23-04-2016 IPR000644 CBS domain CFF04554_RS09070 e6b9d0631bd1aa492861bc093da53150 317 Pfam PF01380 SIS domain 37 166 8.6E-26 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CFF04554_RS09070 e6b9d0631bd1aa492861bc093da53150 317 Gene3D G3DSA:3.40.50.10490 6 189 6.8E-45 T 23-04-2016 CFF04554_RS09070 e6b9d0631bd1aa492861bc093da53150 317 PIRSF PIRSF004692 1 317 2.4E-116 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CFF04554_RS09070 e6b9d0631bd1aa492861bc093da53150 317 PANTHER PTHR38418:SF1 2 297 4.0E-39 T 23-04-2016 CFF04554_RS01310 c144970c1714af73c72c9df1ca966259 138 SUPERFAMILY SSF46785 2 126 1.39E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS01310 c144970c1714af73c72c9df1ca966259 138 Pfam PF01475 Ferric uptake regulator family 10 111 3.8E-26 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CFF04554_RS01310 c144970c1714af73c72c9df1ca966259 138 Gene3D G3DSA:1.10.10.10 3 79 5.7E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS01310 c144970c1714af73c72c9df1ca966259 138 PANTHER PTHR33202 3 137 5.9E-29 T 23-04-2016 CFF04554_RS01310 c144970c1714af73c72c9df1ca966259 138 PANTHER PTHR33202:SF7 3 137 5.9E-29 T 23-04-2016 CFF04554_RS02605 86eb7056011a0c719d0dd997f4bc00f5 414 Pfam PF02687 FtsX-like permease family 292 403 8.7E-16 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CFF04554_RS02605 86eb7056011a0c719d0dd997f4bc00f5 414 PANTHER PTHR30489:SF16 262 413 6.7E-51 T 23-04-2016 CFF04554_RS02605 86eb7056011a0c719d0dd997f4bc00f5 414 PANTHER PTHR30489:SF16 1 242 6.7E-51 T 23-04-2016 CFF04554_RS02605 86eb7056011a0c719d0dd997f4bc00f5 414 Pfam PF12704 MacB-like periplasmic core domain 19 189 1.1E-6 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CFF04554_RS02605 86eb7056011a0c719d0dd997f4bc00f5 414 PANTHER PTHR30489 262 413 6.7E-51 T 23-04-2016 CFF04554_RS02605 86eb7056011a0c719d0dd997f4bc00f5 414 PANTHER PTHR30489 1 242 6.7E-51 T 23-04-2016 CFF04554_RS04325 a7d3c2ee496c9ea80ae25c264f57b57b 265 PANTHER PTHR30231 35 244 1.9E-30 T 23-04-2016 CFF04554_RS04325 a7d3c2ee496c9ea80ae25c264f57b57b 265 Pfam PF00929 Exonuclease 75 225 4.6E-22 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CFF04554_RS04325 a7d3c2ee496c9ea80ae25c264f57b57b 265 SMART SM00479 72 234 8.8E-33 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CFF04554_RS04325 a7d3c2ee496c9ea80ae25c264f57b57b 265 Gene3D G3DSA:3.30.420.10 66 232 2.4E-42 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS04325 a7d3c2ee496c9ea80ae25c264f57b57b 265 SUPERFAMILY SSF53098 73 255 1.18E-40 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS04325 a7d3c2ee496c9ea80ae25c264f57b57b 265 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 71 228 7.4E-22 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS08870 1ee0ae83f29eb1ea3422cf427501228c 264 SUPERFAMILY SSF53807 19 261 7.85E-48 T 23-04-2016 CFF04554_RS08870 1ee0ae83f29eb1ea3422cf427501228c 264 Pfam PF01497 Periplasmic binding protein 21 241 2.2E-32 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CFF04554_RS08870 1ee0ae83f29eb1ea3422cf427501228c 264 Gene3D G3DSA:3.40.50.1980 132 262 1.2E-19 T 23-04-2016 CFF04554_RS08870 1ee0ae83f29eb1ea3422cf427501228c 264 Gene3D G3DSA:3.40.50.1980 19 131 3.6E-24 T 23-04-2016 CFF04554_RS08870 1ee0ae83f29eb1ea3422cf427501228c 264 PANTHER PTHR30535 19 262 8.6E-29 T 23-04-2016 CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 SUPERFAMILY SSF48179 148 247 3.91E-24 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 248 19.139 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 SUPERFAMILY SSF51735 1 143 8.2E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 247 8.9E-60 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 Gene3D G3DSA:1.10.3730.10 148 247 9.2E-29 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 PIRSF PIRSF000193 1 248 2.4E-55 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 149 247 3.9E-29 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 205 227 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 Gene3D G3DSA:3.40.50.720 2 143 8.2E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 PANTHER PTHR11645 1 245 5.8E-42 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CFF04554_RS07970 de952c6b230d226baa1ef23372667a4c 248 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 88 2.1E-10 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CFF04554_RS09100 6c7e2fb88880e7d638c0614a66ae3803 354 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 351 7.0E-136 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS09100 6c7e2fb88880e7d638c0614a66ae3803 354 SUPERFAMILY SSF102114 108 311 6.02E-14 T 23-04-2016 CFF04554_RS09100 6c7e2fb88880e7d638c0614a66ae3803 354 PIRSF PIRSF006004 1 354 1.3E-135 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS09100 6c7e2fb88880e7d638c0614a66ae3803 354 PANTHER PTHR30544 1 349 2.6E-151 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS09100 6c7e2fb88880e7d638c0614a66ae3803 354 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 352 72.107 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS09100 6c7e2fb88880e7d638c0614a66ae3803 354 Pfam PF04055 Radical SAM superfamily 114 276 1.0E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS09100 6c7e2fb88880e7d638c0614a66ae3803 354 PANTHER PTHR30544:SF5 1 349 2.6E-151 T 23-04-2016 CFF04554_RS09100 6c7e2fb88880e7d638c0614a66ae3803 354 Gene3D G3DSA:3.20.20.70 111 324 6.5E-13 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS08630 dcc0db728643735f12c0c37872ec62c6 412 PANTHER PTHR30629 75 403 8.4E-42 T 23-04-2016 CFF04554_RS08630 dcc0db728643735f12c0c37872ec62c6 412 Gene3D G3DSA:1.10.150.130 106 198 5.7E-14 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CFF04554_RS08630 dcc0db728643735f12c0c37872ec62c6 412 SUPERFAMILY SSF56349 105 372 7.95E-45 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CFF04554_RS08630 dcc0db728643735f12c0c37872ec62c6 412 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 154 1.0E-5 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CFF04554_RS08630 dcc0db728643735f12c0c37872ec62c6 412 PANTHER PTHR30629:SF2 75 403 8.4E-42 T 23-04-2016 CFF04554_RS08630 dcc0db728643735f12c0c37872ec62c6 412 Pfam PF00589 Phage integrase family 215 351 3.7E-13 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CFF04554_RS08630 dcc0db728643735f12c0c37872ec62c6 412 Gene3D G3DSA:1.10.443.10 214 372 2.8E-17 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 SUPERFAMILY SSF103515 903 1162 3.27E-35 T 23-04-2016 IPR005546 Autotransporter beta-domain CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PANTHER PTHR10795 178 233 5.5E-24 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PANTHER PTHR10795 264 451 5.5E-24 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PANTHER PTHR10795 20 144 5.5E-24 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PANTHER PTHR10795 1141 1162 5.5E-24 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 Pfam PF03797 Autotransporter beta-domain 912 1139 3.2E-17 T 23-04-2016 IPR005546 Autotransporter beta-domain CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 Pfam PF00082 Subtilase family 36 340 8.4E-36 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 298 308 - T 23-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PRINTS PR00723 Subtilisin serine protease family (S8) signature 36 55 6.4E-15 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PRINTS PR00723 Subtilisin serine protease family (S8) signature 77 90 6.4E-15 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PRINTS PR00723 Subtilisin serine protease family (S8) signature 297 313 6.4E-15 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 Gene3D G3DSA:2.40.128.130 896 1162 9.8E-65 T 23-04-2016 IPR005546 Autotransporter beta-domain CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 81 91 - T 23-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PANTHER PTHR10795:SF419 178 233 5.5E-24 T 23-04-2016 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PANTHER PTHR10795:SF419 264 451 5.5E-24 T 23-04-2016 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PANTHER PTHR10795:SF419 20 144 5.5E-24 T 23-04-2016 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 PANTHER PTHR10795:SF419 1141 1162 5.5E-24 T 23-04-2016 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 SMART SM00869 899 1152 1.2E-15 T 23-04-2016 IPR005546 Autotransporter beta-domain CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 SUPERFAMILY SSF52743 21 144 1.7E-50 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 SUPERFAMILY SSF52743 175 336 1.7E-50 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 Gene3D G3DSA:3.40.50.200 434 449 9.3E-56 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 Gene3D G3DSA:3.40.50.200 20 366 9.3E-56 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CFF04554_RS07210 dd322fc1045fe84bf6b2d59878540d75 1162 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 520 550 6.9E-7 T 23-04-2016 IPR013425 Autotransporter-associated beta strand repeat CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 Gene3D G3DSA:3.40.190.80 159 285 1.0E-38 T 23-04-2016 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 Gene3D G3DSA:3.30.540.10 6 152 7.2E-36 T 23-04-2016 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 SUPERFAMILY SSF56655 5 284 1.69E-71 T 23-04-2016 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 PIRSF PIRSF500210 1 286 1.0E-85 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 286 31.659 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 PANTHER PTHR11556 33 284 2.5E-70 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 PIRSF PIRSF000904 1 286 2.1E-88 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 7 145 8.3E-31 T 23-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 257 281 3.2E-14 T 23-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 113 131 3.2E-14 T 23-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 43 58 3.2E-14 T 23-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CFF04554_RS03985 5cb323890d16aa6a965e0f7ff90a328f 286 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 193 213 3.2E-14 T 23-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CFF04554_RS05415 bc501edc9c7e12ed29c3d50302a5316d 338 SUPERFAMILY SSF64182 6 311 8.11E-14 T 23-04-2016 CFF04554_RS07745 aaebb85f5e9d8a188a71a779fcf807c3 130 PANTHER PTHR30558 6 128 1.4E-20 T 23-04-2016 CFF04554_RS07745 aaebb85f5e9d8a188a71a779fcf807c3 130 Pfam PF02472 Biopolymer transport protein ExbD/TolR 6 128 4.8E-26 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CFF04554_RS07745 aaebb85f5e9d8a188a71a779fcf807c3 130 PANTHER PTHR30558:SF3 6 128 1.4E-20 T 23-04-2016 CFF04554_RS06165 caa6a32d5a6023a4178dde574affed4c 287 Gene3D G3DSA:2.60.200.30 148 255 7.6E-36 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CFF04554_RS06165 caa6a32d5a6023a4178dde574affed4c 287 Hamap MF_00361 NAD kinase [nadK]. 9 282 27.755 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CFF04554_RS06165 caa6a32d5a6023a4178dde574affed4c 287 PANTHER PTHR20275 56 283 7.3E-64 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CFF04554_RS06165 caa6a32d5a6023a4178dde574affed4c 287 Pfam PF01513 ATP-NAD kinase 61 266 3.2E-38 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CFF04554_RS06165 caa6a32d5a6023a4178dde574affed4c 287 Gene3D G3DSA:3.40.50.10330 6 147 7.1E-25 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CFF04554_RS06165 caa6a32d5a6023a4178dde574affed4c 287 SUPERFAMILY SSF111331 23 285 4.58E-72 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 298 8.6E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PANTHER PTHR22912 3 311 1.4E-99 T 23-04-2016 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 309 4.2E-106 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.2E-29 T 23-04-2016 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.2E-29 T 23-04-2016 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 1.2E-29 T 23-04-2016 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.2E-29 T 23-04-2016 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.2E-29 T 23-04-2016 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 SUPERFAMILY SSF51905 1 308 2.48E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 Gene3D G3DSA:3.50.50.60 256 310 5.8E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 Gene3D G3DSA:3.50.50.60 2 118 4.5E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 Gene3D G3DSA:3.50.50.60 119 239 7.7E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PANTHER PTHR22912:SF48 3 311 1.4E-99 T 23-04-2016 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 3.7E-58 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 3.7E-58 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 3.7E-58 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 3.7E-58 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 3.7E-58 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 3.7E-58 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 3.7E-58 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS01475 9528cefc397a2166edf5a9204cd71b24 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 3.7E-58 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS02045 4b3c5d8fee69a75fca3ae6dd567050fe 296 PANTHER PTHR26402 1 105 3.5E-14 T 23-04-2016 CFF04554_RS02045 4b3c5d8fee69a75fca3ae6dd567050fe 296 Gene3D G3DSA:3.40.50.2300 1 109 1.2E-13 T 23-04-2016 CFF04554_RS02045 4b3c5d8fee69a75fca3ae6dd567050fe 296 PIRSF PIRSF016788 1 296 2.3E-100 T 23-04-2016 IPR014483 Fis-like DNA-binding domain-containing signal transduction response regulator, predicted CFF04554_RS02045 4b3c5d8fee69a75fca3ae6dd567050fe 296 SMART SM00448 1 105 2.2E-5 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS02045 4b3c5d8fee69a75fca3ae6dd567050fe 296 PANTHER PTHR26402:SF578 1 105 3.5E-14 T 23-04-2016 CFF04554_RS02045 4b3c5d8fee69a75fca3ae6dd567050fe 296 Pfam PF00072 Response regulator receiver domain 3 105 1.3E-8 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS02045 4b3c5d8fee69a75fca3ae6dd567050fe 296 SUPERFAMILY SSF52172 1 114 1.12E-16 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 7 146 2.2E-64 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 Gene3D G3DSA:3.30.160.20 7 70 3.1E-29 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 SUPERFAMILY SSF54768 5 74 2.3E-23 T 23-04-2016 CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 Pfam PF00333 Ribosomal protein S5, N-terminal domain 9 72 3.5E-28 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 PANTHER PTHR13718 7 146 9.3E-63 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 Pfam PF03719 Ribosomal protein S5, C-terminal domain 85 146 3.2E-25 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 ProSitePatterns PS00585 Ribosomal protein S5 signature. 26 58 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 Gene3D G3DSA:3.30.230.10 74 145 1.0E-29 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 SUPERFAMILY SSF54211 77 145 1.09E-22 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS00250 5cee3bbeb575ebdea2d2ae5df346cf99 147 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 147 31.724 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CFF04554_RS09410 106c46cbb0d8b77762272c4e0d3fee77 363 SUPERFAMILY SSF58104 42 74 4.32E-50 T 23-04-2016 CFF04554_RS09410 106c46cbb0d8b77762272c4e0d3fee77 363 SUPERFAMILY SSF58104 155 361 4.32E-50 T 23-04-2016 CFF04554_RS09410 106c46cbb0d8b77762272c4e0d3fee77 363 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 207 296 1.5E-31 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS09410 106c46cbb0d8b77762272c4e0d3fee77 363 PANTHER PTHR32089 153 354 1.6E-39 T 23-04-2016 CFF04554_RS09410 106c46cbb0d8b77762272c4e0d3fee77 363 PANTHER PTHR32089 43 54 1.6E-39 T 23-04-2016 CFF04554_RS09410 106c46cbb0d8b77762272c4e0d3fee77 363 Gene3D G3DSA:1.10.287.950 164 355 2.4E-45 T 23-04-2016 CFF04554_RS09410 106c46cbb0d8b77762272c4e0d3fee77 363 SMART SM00283 160 362 6.9E-27 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS02640 7a676922eb4eb371e399c0dcaeda3d54 404 PANTHER PTHR36178 1 404 2.9E-171 T 23-04-2016 CFF04554_RS02640 7a676922eb4eb371e399c0dcaeda3d54 404 PANTHER PTHR36178:SF1 1 404 2.9E-171 T 23-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CFF04554_RS02640 7a676922eb4eb371e399c0dcaeda3d54 404 Pfam PF03616 Sodium/glutamate symporter 4 372 7.6E-149 T 23-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CFF04554_RS02640 7a676922eb4eb371e399c0dcaeda3d54 404 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 4 403 6.4E-169 T 23-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 568 693 1.8E-33 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 Gene3D G3DSA:1.10.287.950 506 696 2.4E-44 T 23-04-2016 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 SUPERFAMILY SSF58104 505 704 3.23E-49 T 23-04-2016 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 SUPERFAMILY SSF58104 387 416 3.23E-49 T 23-04-2016 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 PANTHER PTHR32089:SF1 215 396 3.8E-54 T 23-04-2016 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 PANTHER PTHR32089:SF1 495 696 3.8E-54 T 23-04-2016 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 Gene3D G3DSA:3.30.450.20 199 332 1.1E-12 T 23-04-2016 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 SMART SM00283 495 704 2.3E-32 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 PANTHER PTHR32089 215 396 3.8E-54 T 23-04-2016 CFF04554_RS05160 542f7b542fbac4ae25298db880e5c263 705 PANTHER PTHR32089 495 696 3.8E-54 T 23-04-2016 CFF04554_RS02345 58051af5265ba60a9f19498f50980d18 231 PANTHER PTHR24220:SF483 1 223 8.9E-76 T 23-04-2016 CFF04554_RS02345 58051af5265ba60a9f19498f50980d18 231 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS02345 58051af5265ba60a9f19498f50980d18 231 Gene3D G3DSA:3.40.50.300 3 218 3.8E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02345 58051af5265ba60a9f19498f50980d18 231 SMART SM00382 11 207 5.2E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02345 58051af5265ba60a9f19498f50980d18 231 SUPERFAMILY SSF52540 3 217 1.7E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02345 58051af5265ba60a9f19498f50980d18 231 PANTHER PTHR24220 1 223 8.9E-76 T 23-04-2016 CFF04554_RS02345 58051af5265ba60a9f19498f50980d18 231 Pfam PF00005 ABC transporter 3 151 3.1E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS07960 944a9e113b3adb960f34b7f8065ef915 371 Gene3D G3DSA:3.40.640.10 2 240 3.5E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS07960 944a9e113b3adb960f34b7f8065ef915 371 PANTHER PTHR30244 4 368 2.0E-119 T 23-04-2016 CFF04554_RS07960 944a9e113b3adb960f34b7f8065ef915 371 Gene3D G3DSA:3.90.1150.10 242 367 5.1E-31 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS07960 944a9e113b3adb960f34b7f8065ef915 371 SUPERFAMILY SSF53383 4 365 4.9E-115 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS07960 944a9e113b3adb960f34b7f8065ef915 371 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 361 3.9E-113 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS07960 944a9e113b3adb960f34b7f8065ef915 371 PIRSF PIRSF000390 1 369 3.2E-110 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS07960 944a9e113b3adb960f34b7f8065ef915 371 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 365 3.2E-149 T 23-04-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase CFF04554_RS07960 944a9e113b3adb960f34b7f8065ef915 371 PANTHER PTHR30244:SF3 4 368 2.0E-119 T 23-04-2016 CFF04554_RS05880 f904479926e123a70c0571d036579abf 261 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 2 259 4.9E-69 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS05880 f904479926e123a70c0571d036579abf 261 PANTHER PTHR21089:SF1 2 259 1.3E-62 T 23-04-2016 CFF04554_RS05880 f904479926e123a70c0571d036579abf 261 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 86 2.5E-21 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS05880 f904479926e123a70c0571d036579abf 261 SUPERFAMILY SSF53223 2 98 3.45E-28 T 23-04-2016 CFF04554_RS05880 f904479926e123a70c0571d036579abf 261 Gene3D G3DSA:3.40.50.720 104 259 3.1E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS05880 f904479926e123a70c0571d036579abf 261 SUPERFAMILY SSF51735 99 258 1.05E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS05880 f904479926e123a70c0571d036579abf 261 Gene3D G3DSA:3.40.192.10 2 103 8.6E-34 T 23-04-2016 CFF04554_RS05880 f904479926e123a70c0571d036579abf 261 PANTHER PTHR21089 2 259 1.3E-62 T 23-04-2016 CFF04554_RS05880 f904479926e123a70c0571d036579abf 261 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 257 28.436 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 Gene3D G3DSA:3.40.50.300 589 671 4.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 Gene3D G3DSA:3.40.50.300 274 378 4.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 PANTHER PTHR11070 2 507 2.1E-113 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 PANTHER PTHR11070 562 670 2.1E-113 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 SUPERFAMILY SSF52540 4 416 2.84E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 SUPERFAMILY SSF52540 547 670 2.84E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 Gene3D G3DSA:3.40.50.300 4 269 3.9E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 Gene3D G3DSA:1.10.486.10 379 463 5.4E-4 T 23-04-2016 CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 264 3.4E-43 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CFF04554_RS04800 6d181251d490499650a36b192c95018f 679 Pfam PF13361 UvrD-like helicase C-terminal domain 270 653 1.1E-44 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CFF04554_RS00135 5e2fce4a518efa79d603e9ac927928fb 162 SUPERFAMILY SSF54523 5 75 1.02E-7 T 23-04-2016 CFF04554_RS00135 5e2fce4a518efa79d603e9ac927928fb 162 Gene3D G3DSA:3.30.700.10 5 135 3.4E-5 T 23-04-2016 CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 PANTHER PTHR11993 360 558 7.8E-161 T 23-04-2016 CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 PANTHER PTHR11993 189 253 7.8E-161 T 23-04-2016 CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 PANTHER PTHR11993 1 118 7.8E-161 T 23-04-2016 CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 SUPERFAMILY SSF56762 4 554 9.03E-164 T 23-04-2016 IPR029014 NiFe hydrogenase-like CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 Gene3D G3DSA:1.10.645.10 2 554 1.8E-194 T 23-04-2016 IPR029014 NiFe hydrogenase-like CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 41 66 - T 23-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 Pfam PF00374 Nickel-dependent hydrogenase 41 554 1.6E-206 T 23-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 PANTHER PTHR11993:SF11 360 558 7.8E-161 T 23-04-2016 CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 PANTHER PTHR11993:SF11 189 253 7.8E-161 T 23-04-2016 CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 PANTHER PTHR11993:SF11 1 118 7.8E-161 T 23-04-2016 CFF04554_RS04695 e745b4f14762fc4568f1af316b3cac35 573 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 545 554 - T 23-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PANTHER PTHR10264:SF78 47 116 1.8E-30 T 23-04-2016 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 Pfam PF01145 SPFH domain / Band 7 family 66 266 5.5E-34 T 23-04-2016 IPR001107 Band 7 domain CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PANTHER PTHR10264:SF78 136 255 1.8E-30 T 23-04-2016 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PANTHER PTHR10264:SF78 277 312 1.8E-30 T 23-04-2016 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PANTHER PTHR10264 47 116 1.8E-30 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PANTHER PTHR10264 136 255 1.8E-30 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PANTHER PTHR10264 277 312 1.8E-30 T 23-04-2016 IPR001972 Stomatin family GO:0016020 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 SMART SM00244 62 246 2.7E-24 T 23-04-2016 IPR001107 Band 7 domain CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PRINTS PR00679 Prohibitin signature 144 163 7.1E-13 T 23-04-2016 IPR000163 Prohibitin GO:0016020 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PRINTS PR00679 Prohibitin signature 167 185 7.1E-13 T 23-04-2016 IPR000163 Prohibitin GO:0016020 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PRINTS PR00679 Prohibitin signature 190 206 7.1E-13 T 23-04-2016 IPR000163 Prohibitin GO:0016020 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PRINTS PR00679 Prohibitin signature 241 264 7.1E-13 T 23-04-2016 IPR000163 Prohibitin GO:0016020 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 PRINTS PR00679 Prohibitin signature 264 280 7.1E-13 T 23-04-2016 IPR000163 Prohibitin GO:0016020 CFF04554_RS01510 cb44615208778066688cb807e907d126 364 SUPERFAMILY SSF117892 94 253 2.75E-13 T 23-04-2016 IPR001107 Band 7 domain CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 Gene3D G3DSA:1.10.220.30 205 339 1.2E-34 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 Gene3D G3DSA:1.10.220.30 83 198 3.2E-28 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 Pfam PF14842 FliG N-terminal domain 15 115 1.0E-29 T 23-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PIRSF PIRSF003161 9 342 6.7E-114 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PANTHER PTHR30534:SF0 2 341 2.5E-80 T 23-04-2016 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 Gene3D G3DSA:1.10.220.30 17 81 9.3E-13 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 SUPERFAMILY SSF48029 17 111 1.73E-18 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 Pfam PF14841 FliG middle domain 126 199 5.8E-26 T 23-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 125 148 6.5E-57 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 282 308 6.5E-57 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 205 230 6.5E-57 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 44 70 6.5E-57 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 236 256 6.5E-57 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 258 278 6.5E-57 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 15 31 6.5E-57 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 12 341 2.9E-124 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 Pfam PF01706 FliG C-terminal domain 229 333 2.6E-35 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 SUPERFAMILY SSF48029 126 334 2.09E-58 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CFF04554_RS01325 3f1c93e41478d042ec93c2c9c5b09d72 342 PANTHER PTHR30534 2 341 2.5E-80 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CFF04554_RS01515 6ad7277026fe01fa8cf422f6860e863a 307 PANTHER PTHR11825:SF7 9 305 1.7E-109 T 23-04-2016 CFF04554_RS01515 6ad7277026fe01fa8cf422f6860e863a 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 306 2.1E-129 T 23-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 CFF04554_RS01515 6ad7277026fe01fa8cf422f6860e863a 307 Gene3D G3DSA:3.20.10.10 135 295 3.0E-53 T 23-04-2016 CFF04554_RS01515 6ad7277026fe01fa8cf422f6860e863a 307 SUPERFAMILY SSF56752 7 303 4.58E-91 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CFF04554_RS01515 6ad7277026fe01fa8cf422f6860e863a 307 PANTHER PTHR11825 9 305 1.7E-109 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CFF04554_RS01515 6ad7277026fe01fa8cf422f6860e863a 307 Gene3D G3DSA:3.30.470.10 7 130 1.3E-35 T 23-04-2016 CFF04554_RS01515 6ad7277026fe01fa8cf422f6860e863a 307 Pfam PF01063 Amino-transferase class IV 36 267 8.5E-45 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 PANTHER PTHR11469 56 399 1.5E-66 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 374 391 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 Pfam PF00342 Phosphoglucose isomerase 57 398 2.5E-30 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 Gene3D G3DSA:3.40.50.10490 165 383 1.3E-66 T 23-04-2016 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 PANTHER PTHR11469:SF1 56 399 1.5E-66 T 23-04-2016 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 PRINTS PR00662 Glucose-6-phosphate isomerase signature 60 79 2.5E-19 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 PRINTS PR00662 Glucose-6-phosphate isomerase signature 360 374 2.5E-19 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 PRINTS PR00662 Glucose-6-phosphate isomerase signature 374 387 2.5E-19 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 PRINTS PR00662 Glucose-6-phosphate isomerase signature 163 181 2.5E-19 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 PRINTS PR00662 Glucose-6-phosphate isomerase signature 234 255 2.5E-19 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 SUPERFAMILY SSF53697 36 399 2.57E-98 T 23-04-2016 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 3 401 22.231 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS00395 31d29bcc4491b0285b1b5055c31bc012 401 Gene3D G3DSA:3.40.50.10490 54 164 5.4E-24 T 23-04-2016 CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 7 28 3.4E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 Gene3D G3DSA:2.102.10.10 11 157 8.6E-36 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 Pfam PF00355 Rieske [2Fe-2S] domain 52 143 7.7E-11 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 4 31 1.1E-5 T 23-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 95 106 2.0E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 128 140 2.0E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 PRINTS PR00162 Rieske 2Fe-2S subunit signature 116 128 2.0E-7 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 PANTHER PTHR10134 7 162 3.9E-25 T 23-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 6 155 4.5E-44 T 23-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CFF04554_RS07370 b5a183ae3fbb2602c64ecc76602117bd 168 SUPERFAMILY SSF50022 29 159 3.54E-29 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CFF04554_RS01500 7672f2d29e534bc6fddbca9a1b76f120 177 Pfam PF09624 Protein of unknown function (DUF2393) 35 177 7.2E-37 T 23-04-2016 IPR013417 Conserved hypothetical protein CHP02588 CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 Gene3D G3DSA:3.40.50.2300 2 104 1.8E-13 T 23-04-2016 CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 411 1.9E-36 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 SMART SM00448 125 240 1.2E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 SMART SM00448 3 116 0.0023 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 414 9.6E-41 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 SMART SM00267 245 415 3.1E-39 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 Gene3D G3DSA:3.30.70.270 259 414 2.5E-41 T 23-04-2016 CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 Pfam PF00072 Response regulator receiver domain 127 240 1.5E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 Pfam PF00072 Response regulator receiver domain 5 104 4.0E-7 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 SUPERFAMILY SSF52172 4 121 2.42E-15 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 SUPERFAMILY SSF52172 125 248 7.68E-32 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 PANTHER PTHR26402 125 237 1.3E-32 T 23-04-2016 CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 Gene3D G3DSA:3.40.50.2300 122 244 1.4E-32 T 23-04-2016 CFF04554_RS06155 dfde18eeb4ed2374f5e423dfd362d355 415 SUPERFAMILY SSF55073 262 414 1.96E-39 T 23-04-2016 IPR029787 Nucleotide cyclase CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 358 43.017 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 Pfam PF00266 Aminotransferase class-V 4 347 1.3E-42 T 23-04-2016 IPR000192 Aminotransferase class V domain CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 Gene3D G3DSA:3.90.1150.10 257 356 9.2E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 205 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 PANTHER PTHR21152 3 359 8.3E-142 T 23-04-2016 CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 PANTHER PTHR21152:SF1 3 359 8.3E-142 T 23-04-2016 CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 Gene3D G3DSA:3.40.640.10 17 256 8.8E-82 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 356 1.5E-139 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 PIRSF PIRSF000525 1 359 2.5E-132 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CFF04554_RS01265 bddd9c34a675b87a60eae8c96be70311 359 SUPERFAMILY SSF53383 3 357 2.93E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS01115 a49ec2ea8d6ddf7e9ec1bb62cb0ba758 193 SUPERFAMILY SSF55620 1 147 1.11E-30 T 23-04-2016 CFF04554_RS01115 a49ec2ea8d6ddf7e9ec1bb62cb0ba758 193 PANTHER PTHR12589:SF5 3 152 1.2E-14 T 23-04-2016 CFF04554_RS01115 a49ec2ea8d6ddf7e9ec1bb62cb0ba758 193 PANTHER PTHR12589 3 152 1.2E-14 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CFF04554_RS01115 a49ec2ea8d6ddf7e9ec1bb62cb0ba758 193 Gene3D G3DSA:3.30.479.10 1 147 2.1E-28 T 23-04-2016 CFF04554_RS01115 a49ec2ea8d6ddf7e9ec1bb62cb0ba758 193 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 144 4.2E-25 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CFF04554_RS06795 e6307fa96156aaf8afef003be9f8d17d 186 Gene3D G3DSA:2.60.40.200 41 186 1.3E-38 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS06795 e6307fa96156aaf8afef003be9f8d17d 186 PANTHER PTHR10003:SF40 52 186 2.0E-27 T 23-04-2016 CFF04554_RS06795 e6307fa96156aaf8afef003be9f8d17d 186 PANTHER PTHR10003 52 186 2.0E-27 T 23-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 CFF04554_RS06795 e6307fa96156aaf8afef003be9f8d17d 186 SUPERFAMILY SSF49329 38 185 1.27E-41 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS06795 e6307fa96156aaf8afef003be9f8d17d 186 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 81 91 - T 23-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS06795 e6307fa96156aaf8afef003be9f8d17d 186 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 51 185 4.6E-29 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS06795 e6307fa96156aaf8afef003be9f8d17d 186 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 174 185 - T 23-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS08400 c3a5b14a44d92672a7f78cd7eb31b81e 310 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 310 8.4E-22 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CFF04554_RS08400 c3a5b14a44d92672a7f78cd7eb31b81e 310 Gene3D G3DSA:3.40.50.720 106 288 2.0E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS08400 c3a5b14a44d92672a7f78cd7eb31b81e 310 Gene3D G3DSA:3.40.50.720 1 105 3.9E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS08400 c3a5b14a44d92672a7f78cd7eb31b81e 310 SUPERFAMILY SSF52283 1 120 2.65E-28 T 23-04-2016 CFF04554_RS08400 c3a5b14a44d92672a7f78cd7eb31b81e 310 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CFF04554_RS08400 c3a5b14a44d92672a7f78cd7eb31b81e 310 SUPERFAMILY SSF51735 100 287 3.71E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS08400 c3a5b14a44d92672a7f78cd7eb31b81e 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 286 1.4E-44 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CFF04554_RS08400 c3a5b14a44d92672a7f78cd7eb31b81e 310 PANTHER PTHR10996 1 310 2.0E-74 T 23-04-2016 CFF04554_RS07080 b1fe6ba4a48ce980e53aa12c58da5416 330 Gene3D G3DSA:3.40.50.720 1 176 5.7E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07080 b1fe6ba4a48ce980e53aa12c58da5416 330 PANTHER PTHR10366 2 328 2.5E-103 T 23-04-2016 CFF04554_RS07080 b1fe6ba4a48ce980e53aa12c58da5416 330 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 329 6.1E-135 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 CFF04554_RS07080 b1fe6ba4a48ce980e53aa12c58da5416 330 PANTHER PTHR10366:SF39 2 328 2.5E-103 T 23-04-2016 CFF04554_RS07080 b1fe6ba4a48ce980e53aa12c58da5416 330 Gene3D G3DSA:3.90.25.10 177 328 1.6E-38 T 23-04-2016 CFF04554_RS07080 b1fe6ba4a48ce980e53aa12c58da5416 330 SUPERFAMILY SSF51735 1 328 8.31E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07080 b1fe6ba4a48ce980e53aa12c58da5416 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 258 5.2E-52 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 Gene3D G3DSA:1.10.357.20 284 452 2.6E-48 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 Pfam PF03448 MgtE intracellular N domain 25 131 2.3E-17 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 SUPERFAMILY SSF158791 22 130 1.44E-15 T 23-04-2016 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 SUPERFAMILY SSF161093 281 452 5.49E-45 T 23-04-2016 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 23 452 1.1E-75 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 PANTHER PTHR41394 282 440 2.4E-36 T 23-04-2016 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 SUPERFAMILY SSF54631 133 276 2.53E-17 T 23-04-2016 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 Pfam PF01769 Divalent cation transporter 324 446 4.3E-25 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 PANTHER PTHR41394:SF1 282 440 2.4E-36 T 23-04-2016 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 Gene3D G3DSA:3.10.580.10 125 265 3.2E-12 T 23-04-2016 CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 Pfam PF00571 CBS domain 212 259 4.3E-4 T 23-04-2016 IPR000644 CBS domain CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 SMART SM00924 24 133 4.0E-19 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CFF04554_RS03500 6595e6ff8b3a153bcf1fe6361a6241e2 453 Gene3D G3DSA:1.25.60.10 22 124 1.2E-16 T 23-04-2016 CFF04554_RS03580 a8bda398b44d9877ee34ce90675b6897 246 PANTHER PTHR20861:SF2 1 245 1.1E-35 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS03580 a8bda398b44d9877ee34ce90675b6897 246 SUPERFAMILY SSF54211 2 152 8.35E-23 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS03580 a8bda398b44d9877ee34ce90675b6897 246 Pfam PF00288 GHMP kinases N terminal domain 83 139 9.5E-9 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CFF04554_RS03580 a8bda398b44d9877ee34ce90675b6897 246 Gene3D G3DSA:3.30.70.890 164 244 1.2E-4 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CFF04554_RS03580 a8bda398b44d9877ee34ce90675b6897 246 PIRSF PIRSF010376 1 245 2.9E-52 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS03580 a8bda398b44d9877ee34ce90675b6897 246 SUPERFAMILY SSF55060 164 244 1.73E-6 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain CFF04554_RS03580 a8bda398b44d9877ee34ce90675b6897 246 Gene3D G3DSA:3.30.230.10 2 154 5.7E-30 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS03580 a8bda398b44d9877ee34ce90675b6897 246 PANTHER PTHR20861 1 245 1.1E-35 T 23-04-2016 CFF04554_RS07920 4976fdfc55719c54209748ecd3ba3f51 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 207 1.1E-83 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 CFF04554_RS07920 4976fdfc55719c54209748ecd3ba3f51 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 208 41.989 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 CFF04554_RS07920 4976fdfc55719c54209748ecd3ba3f51 209 SUPERFAMILY SSF53271 4 206 1.04E-67 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07920 4976fdfc55719c54209748ecd3ba3f51 209 Gene3D G3DSA:3.40.50.2020 3 207 3.4E-76 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07920 4976fdfc55719c54209748ecd3ba3f51 209 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.7E-67 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07920 4976fdfc55719c54209748ecd3ba3f51 209 PANTHER PTHR10285 1 197 7.5E-85 T 23-04-2016 CFF04554_RS06950 6e68659e21974259a25d8068ae91e55c 77 Gene3D G3DSA:1.10.1200.10 3 74 2.0E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CFF04554_RS06950 6e68659e21974259a25d8068ae91e55c 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site CFF04554_RS06950 6e68659e21974259a25d8068ae91e55c 77 Pfam PF00550 Phosphopantetheine attachment site 5 72 9.3E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CFF04554_RS06950 6e68659e21974259a25d8068ae91e55c 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 74 8.0E-11 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CFF04554_RS06950 6e68659e21974259a25d8068ae91e55c 77 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 20.616 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CFF04554_RS06950 6e68659e21974259a25d8068ae91e55c 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 74 5.1E-30 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CFF04554_RS06950 6e68659e21974259a25d8068ae91e55c 77 PANTHER PTHR20863 3 73 1.7E-22 T 23-04-2016 CFF04554_RS06950 6e68659e21974259a25d8068ae91e55c 77 SUPERFAMILY SSF47336 2 74 4.19E-20 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CFF04554_RS01010 5d5e9ac363be94ea9b6086d3cfd4e256 272 PANTHER PTHR37167 1 264 1.3E-36 T 23-04-2016 CFF04554_RS01010 5d5e9ac363be94ea9b6086d3cfd4e256 272 SUPERFAMILY SSF53850 1 250 2.04E-65 T 23-04-2016 CFF04554_RS01010 5d5e9ac363be94ea9b6086d3cfd4e256 272 Pfam PF02621 Menaquinone biosynthesis 1 246 4.4E-64 T 23-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 CFF04554_RS09025 1be5855123d169645276a1bd9efe9fd9 102 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 40 101 4.4E-8 T 23-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative CFF04554_RS08245 e3bb6f21bcfdeea3975f09228f0e8962 194 Pfam PF00117 Glutamine amidotransferase class-I 46 179 7.5E-11 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CFF04554_RS08245 e3bb6f21bcfdeea3975f09228f0e8962 194 Gene3D G3DSA:3.40.50.880 31 192 3.6E-25 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS08245 e3bb6f21bcfdeea3975f09228f0e8962 194 SUPERFAMILY SSF52317 27 176 2.07E-23 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 SUPERFAMILY SSF54862 49 200 8.2E-23 T 23-04-2016 CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 Gene3D G3DSA:1.10.1060.10 32 58 2.5E-8 T 23-04-2016 CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 51 62 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 PANTHER PTHR30176 36 227 1.9E-57 T 23-04-2016 CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 Pfam PF12838 4Fe-4S dicluster domain 50 106 2.3E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 Pfam PF12838 4Fe-4S dicluster domain 142 194 3.0E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 2 210 2.1E-58 T 23-04-2016 IPR004494 MauM/NapG ferredoxin-type protein CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 Gene3D G3DSA:3.30.70.20 140 197 2.0E-9 T 23-04-2016 CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 Gene3D G3DSA:3.30.70.20 100 139 1.6E-5 T 23-04-2016 CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 PANTHER PTHR30176:SF3 36 227 1.9E-57 T 23-04-2016 CFF04554_RS05990 cf12940e21f7bb1ef472933f6df3815a 250 Gene3D G3DSA:3.30.70.20 59 99 1.2E-6 T 23-04-2016 CFF04554_RS07295 c2b088139a7da6be6a4254954cda3611 342 PANTHER PTHR30106:SF2 17 341 7.8E-78 T 23-04-2016 CFF04554_RS07295 c2b088139a7da6be6a4254954cda3611 342 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 15 337 8.9E-72 T 23-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 CFF04554_RS07295 c2b088139a7da6be6a4254954cda3611 342 PANTHER PTHR30106 17 341 7.8E-78 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CFF04554_RS07295 c2b088139a7da6be6a4254954cda3611 342 Pfam PF03601 Conserved hypothetical protein 698 17 323 8.1E-72 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CFF04554_RS09345 f2a2820fc77d24c224ce3b820f49375e 522 Pfam PF10119 Predicted methyltransferase regulatory domain 223 300 2.8E-18 T 23-04-2016 IPR018773 Methyltransferase regulatory domain, predicted CFF04554_RS09345 f2a2820fc77d24c224ce3b820f49375e 522 PANTHER PTHR10108:SF829 20 155 3.7E-24 T 23-04-2016 CFF04554_RS09345 f2a2820fc77d24c224ce3b820f49375e 522 PANTHER PTHR10108:SF829 414 509 3.7E-24 T 23-04-2016 CFF04554_RS09345 f2a2820fc77d24c224ce3b820f49375e 522 Gene3D G3DSA:3.40.50.150 3 165 2.5E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS09345 f2a2820fc77d24c224ce3b820f49375e 522 Pfam PF13847 Methyltransferase domain 41 150 3.2E-14 T 23-04-2016 IPR025714 Methyltransferase domain CFF04554_RS09345 f2a2820fc77d24c224ce3b820f49375e 522 PANTHER PTHR10108 20 155 3.7E-24 T 23-04-2016 CFF04554_RS09345 f2a2820fc77d24c224ce3b820f49375e 522 PANTHER PTHR10108 414 509 3.7E-24 T 23-04-2016 CFF04554_RS09345 f2a2820fc77d24c224ce3b820f49375e 522 SUPERFAMILY SSF53335 27 156 1.01E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 SUPERFAMILY SSF52029 183 375 5.53E-85 T 23-04-2016 IPR027409 GroEL-like apical domain CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 Hamap MF_00600 60 kDa chaperonin [groL]. 1 544 41.755 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 8.3E-258 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 Gene3D G3DSA:1.10.560.10 3 187 1.3E-46 T 23-04-2016 IPR027413 GroEL-like equatorial domain CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 PRINTS PR00298 60kDa chaperonin signature 26 52 2.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 PRINTS PR00298 60kDa chaperonin signature 349 374 2.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 PRINTS PR00298 60kDa chaperonin signature 397 418 2.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 PRINTS PR00298 60kDa chaperonin signature 82 109 2.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 PRINTS PR00298 60kDa chaperonin signature 267 290 2.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 Gene3D G3DSA:3.50.7.10 188 365 3.6E-100 T 23-04-2016 IPR027409 GroEL-like apical domain CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 PANTHER PTHR11353 1 545 1.4E-246 T 23-04-2016 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 SUPERFAMILY SSF54849 137 203 5.95E-26 T 23-04-2016 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 Gene3D G3DSA:1.10.560.10 366 516 4.3E-38 T 23-04-2016 IPR027413 GroEL-like equatorial domain CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 2.5E-101 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 SUPERFAMILY SSF48592 6 133 1.6E-72 T 23-04-2016 CFF04554_RS03520 6534c24649cbe8af8ed82fed17d7739f 545 SUPERFAMILY SSF48592 405 519 1.6E-72 T 23-04-2016 CFF04554_RS07650 89055f68097b375372ff42d533b6d335 287 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 46 245 9.3E-60 T 23-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CFF04554_RS07650 89055f68097b375372ff42d533b6d335 287 Gene3D G3DSA:3.90.226.10 25 140 7.9E-43 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS07650 89055f68097b375372ff42d533b6d335 287 Gene3D G3DSA:3.90.226.10 178 262 7.9E-43 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS07650 89055f68097b375372ff42d533b6d335 287 Pfam PF01343 Peptidase family S49 101 251 9.9E-48 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CFF04554_RS07650 89055f68097b375372ff42d533b6d335 287 PANTHER PTHR33209:SF4 35 280 1.7E-47 T 23-04-2016 CFF04554_RS07650 89055f68097b375372ff42d533b6d335 287 SUPERFAMILY SSF52096 177 236 1.29E-35 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS07650 89055f68097b375372ff42d533b6d335 287 SUPERFAMILY SSF52096 25 148 1.29E-35 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS07650 89055f68097b375372ff42d533b6d335 287 PANTHER PTHR33209 35 280 1.7E-47 T 23-04-2016 CFF04554_RS03135 6197152dc185d89eadc943ecf04828ec 447 SUPERFAMILY SSF51569 2 445 3.81E-198 T 23-04-2016 CFF04554_RS03135 6197152dc185d89eadc943ecf04828ec 447 Pfam PF01474 Class-II DAHP synthetase family 4 441 2.7E-199 T 23-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CFF04554_RS03135 6197152dc185d89eadc943ecf04828ec 447 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 446 6.9E-205 T 23-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CFF04554_RS03135 6197152dc185d89eadc943ecf04828ec 447 PANTHER PTHR21337 2 447 9.5E-271 T 23-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 PANTHER PTHR21445:SF0 2 282 1.5E-137 T 23-04-2016 CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 SUPERFAMILY SSF51658 2 280 1.02E-92 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 41.174 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 277 2.2E-101 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 Gene3D G3DSA:3.20.20.150 2 280 5.7E-111 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 SMART SM00518 3 279 3.7E-114 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 PANTHER PTHR21445 2 282 1.5E-137 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CFF04554_RS08435 04893e30391a225132ce12da1114a9b1 282 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 7.9E-35 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CFF04554_RS05775 8e3b11c275eae42130e7269acefb9797 156 SUPERFAMILY SSF55811 6 151 9.07E-21 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CFF04554_RS05775 8e3b11c275eae42130e7269acefb9797 156 PRINTS PR00502 NUDIX hydrolase family signature 38 52 6.9E-5 T 23-04-2016 IPR020476 NUDIX hydrolase CFF04554_RS05775 8e3b11c275eae42130e7269acefb9797 156 PRINTS PR00502 NUDIX hydrolase family signature 52 67 6.9E-5 T 23-04-2016 IPR020476 NUDIX hydrolase CFF04554_RS05775 8e3b11c275eae42130e7269acefb9797 156 Pfam PF00293 NUDIX domain 7 144 5.5E-18 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CFF04554_RS05775 8e3b11c275eae42130e7269acefb9797 156 Gene3D G3DSA:3.90.79.10 3 150 5.6E-23 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CFF04554_RS05775 8e3b11c275eae42130e7269acefb9797 156 PANTHER PTHR11839 6 150 1.5E-28 T 23-04-2016 CFF04554_RS05775 8e3b11c275eae42130e7269acefb9797 156 PANTHER PTHR11839:SF13 6 150 1.5E-28 T 23-04-2016 CFF04554_RS05775 8e3b11c275eae42130e7269acefb9797 156 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CFF04554_RS08820 35642691c6fbdad755503aa950ca3d1b 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 556 6.3E-224 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS08820 35642691c6fbdad755503aa950ca3d1b 557 PANTHER PTHR21000 1 556 2.6E-293 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS08820 35642691c6fbdad755503aa950ca3d1b 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS08820 35642691c6fbdad755503aa950ca3d1b 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 556 43.327 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS08820 35642691c6fbdad755503aa950ca3d1b 557 Pfam PF00920 Dehydratase family 31 553 5.0E-209 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS08820 35642691c6fbdad755503aa950ca3d1b 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS08820 35642691c6fbdad755503aa950ca3d1b 557 SUPERFAMILY SSF143975 1 376 1.16E-126 T 23-04-2016 CFF04554_RS08820 35642691c6fbdad755503aa950ca3d1b 557 SUPERFAMILY SSF52016 377 556 3.37E-57 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFF04554_RS08820 35642691c6fbdad755503aa950ca3d1b 557 PANTHER PTHR21000:SF11 1 556 2.6E-293 T 23-04-2016 CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 PRINTS PR01388 Cytolethal distending toxin B signature 93 111 5.2E-52 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 PRINTS PR01388 Cytolethal distending toxin B signature 136 155 5.2E-52 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 PRINTS PR01388 Cytolethal distending toxin B signature 179 194 5.2E-52 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 PRINTS PR01388 Cytolethal distending toxin B signature 60 80 5.2E-52 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 PRINTS PR01388 Cytolethal distending toxin B signature 243 259 5.2E-52 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 PRINTS PR01388 Cytolethal distending toxin B signature 19 40 5.2E-52 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 Gene3D G3DSA:3.60.10.10 10 263 3.5E-101 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 PIRSF PIRSF018539 1 264 9.6E-116 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 SUPERFAMILY SSF56219 21 259 7.85E-27 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS04760 32413789e672322fbc6eb29b72733f62 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 25 234 9.9E-10 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS07505 273a82a3bdaa262f07bddf584462dbbb 71 SUPERFAMILY SSF55331 2 65 1.55E-15 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily CFF04554_RS07505 273a82a3bdaa262f07bddf584462dbbb 71 PANTHER PTHR35530:SF1 1 69 3.1E-15 T 23-04-2016 CFF04554_RS07505 273a82a3bdaa262f07bddf584462dbbb 71 Gene3D G3DSA:3.30.429.20 1 61 3.2E-23 T 23-04-2016 CFF04554_RS07505 273a82a3bdaa262f07bddf584462dbbb 71 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 64 7.1E-23 T 23-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 CFF04554_RS07505 273a82a3bdaa262f07bddf584462dbbb 71 PANTHER PTHR35530 1 69 3.1E-15 T 23-04-2016 CFF04554_RS07505 273a82a3bdaa262f07bddf584462dbbb 71 Pfam PF01361 Tautomerase enzyme 2 63 7.1E-20 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CFF04554_RS04830 5965b1fdcc4669c1a959981699a44d15 263 Gene3D G3DSA:3.40.1190.20 2 256 1.4E-97 T 23-04-2016 IPR029056 Ribokinase-like CFF04554_RS04830 5965b1fdcc4669c1a959981699a44d15 263 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 255 3.0E-98 T 23-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CFF04554_RS04830 5965b1fdcc4669c1a959981699a44d15 263 SUPERFAMILY SSF53613 2 258 1.53E-72 T 23-04-2016 IPR029056 Ribokinase-like CFF04554_RS04830 5965b1fdcc4669c1a959981699a44d15 263 PANTHER PTHR20858:SF17 1 259 1.5E-112 T 23-04-2016 CFF04554_RS04830 5965b1fdcc4669c1a959981699a44d15 263 PANTHER PTHR20858 1 259 1.5E-112 T 23-04-2016 CFF04554_RS04830 5965b1fdcc4669c1a959981699a44d15 263 Pfam PF08543 Phosphomethylpyrimidine kinase 11 253 1.5E-91 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 405 50.628 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 SUPERFAMILY SSF69864 178 405 1.83E-93 T 23-04-2016 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 Pfam PF00764 Arginosuccinate synthase 10 397 8.7E-154 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 122 133 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 397 3.5E-143 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 PANTHER PTHR11587:SF2 5 406 2.2E-223 T 23-04-2016 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 Gene3D G3DSA:3.90.1260.10 165 362 3.6E-98 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 SUPERFAMILY SSF52402 7 172 3.09E-45 T 23-04-2016 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 Gene3D G3DSA:1.20.5.470 377 396 2.8E-4 T 23-04-2016 CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 Gene3D G3DSA:3.40.50.620 7 164 7.5E-66 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS04225 ada6d0c7854d8ad1e06290c61e0188a9 407 PANTHER PTHR11587 5 406 2.2E-223 T 23-04-2016 CFF04554_RS09415 1389f01cf83174c81e2a9c82f102dabb 128 ProSitePatterns PS00785 5'-nucleotidase signature 1. 37 49 - T 23-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 CFF04554_RS09415 1389f01cf83174c81e2a9c82f102dabb 128 Gene3D G3DSA:3.60.21.10 34 119 2.2E-25 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS09415 1389f01cf83174c81e2a9c82f102dabb 128 PANTHER PTHR11575 12 119 2.2E-23 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CFF04554_RS09415 1389f01cf83174c81e2a9c82f102dabb 128 PANTHER PTHR11575:SF27 12 119 2.2E-23 T 23-04-2016 CFF04554_RS09415 1389f01cf83174c81e2a9c82f102dabb 128 SUPERFAMILY SSF56300 35 120 1.07E-24 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PANTHER PTHR22912:SF106 1 81 9.2E-20 T 23-04-2016 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PANTHER PTHR22912:SF106 119 313 9.2E-20 T 23-04-2016 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 Gene3D G3DSA:3.50.50.60 173 314 7.8E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 4.0E-18 T 23-04-2016 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 4.0E-18 T 23-04-2016 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.0E-18 T 23-04-2016 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 4.0E-18 T 23-04-2016 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PANTHER PTHR22912 1 81 9.2E-20 T 23-04-2016 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PANTHER PTHR22912 119 313 9.2E-20 T 23-04-2016 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 SUPERFAMILY SSF51905 1 314 1.75E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 289 8.6E-52 T 23-04-2016 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 Gene3D G3DSA:3.50.50.60 4 172 4.9E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 4.4E-14 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 130 4.4E-14 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 157 181 4.4E-14 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS03145 d74ed9a2ed1c48bb82654130f189b21f 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 4.4E-14 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CFF04554_RS04795 080f1e3357a1038335f00d0af6abac52 261 PANTHER PTHR10108 5 135 1.5E-13 T 23-04-2016 CFF04554_RS04795 080f1e3357a1038335f00d0af6abac52 261 Gene3D G3DSA:3.40.50.150 3 134 4.2E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04795 080f1e3357a1038335f00d0af6abac52 261 SUPERFAMILY SSF53335 5 134 4.18E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04795 080f1e3357a1038335f00d0af6abac52 261 PANTHER PTHR10108:SF705 5 135 1.5E-13 T 23-04-2016 CFF04554_RS04795 080f1e3357a1038335f00d0af6abac52 261 Pfam PF13649 Methyltransferase domain 45 132 7.4E-12 T 23-04-2016 CFF04554_RS02235 04c6c5f4b30d88e61d4041e46d971b59 217 SMART SM00382 26 205 4.4E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02235 04c6c5f4b30d88e61d4041e46d971b59 217 Gene3D G3DSA:3.40.50.300 2 208 4.6E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02235 04c6c5f4b30d88e61d4041e46d971b59 217 Pfam PF00005 ABC transporter 17 158 9.2E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS02235 04c6c5f4b30d88e61d4041e46d971b59 217 SUPERFAMILY SSF52540 2 208 9.35E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02235 04c6c5f4b30d88e61d4041e46d971b59 217 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS02235 04c6c5f4b30d88e61d4041e46d971b59 217 PANTHER PTHR24220 3 206 2.2E-56 T 23-04-2016 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 SUPERFAMILY SSF48452 391 507 7.32E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 SMART SM00028 454 487 0.0076 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 SMART SM00028 134 167 0.0013 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 SMART SM00028 267 299 55.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 Gene3D G3DSA:1.25.40.10 435 489 4.7E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 Pfam PF13432 Tetratricopeptide repeat 106 163 0.0063 T 23-04-2016 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 Gene3D G3DSA:1.25.40.10 257 326 1.9E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 Gene3D G3DSA:1.25.40.10 133 154 1.9E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 PANTHER PTHR23083 433 496 3.0E-16 T 23-04-2016 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 PANTHER PTHR23083 672 759 3.0E-16 T 23-04-2016 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 PANTHER PTHR23083 112 164 3.0E-16 T 23-04-2016 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 PANTHER PTHR23083 264 348 3.0E-16 T 23-04-2016 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 SUPERFAMILY SSF48452 260 327 5.69E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 SUPERFAMILY SSF48452 99 228 5.69E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 Gene3D G3DSA:1.25.40.10 678 760 2.4E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 Pfam PF13181 Tetratricopeptide repeat 274 294 0.028 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 SUPERFAMILY SSF81901 431 485 1.49E-7 T 23-04-2016 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 SUPERFAMILY SSF81901 662 766 1.49E-7 T 23-04-2016 CFF04554_RS06860 c4dd64484dc0fb40c78fbb7476fb4be7 776 Gene3D G3DSA:1.25.40.10 155 229 6.3E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 SUPERFAMILY SSF64518 1 519 2.62E-87 T 23-04-2016 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 Pfam PF07196 Flagellin hook IN motif 266 315 2.0E-7 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 Pfam PF07196 Flagellin hook IN motif 197 252 5.8E-5 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 PANTHER PTHR30244:SF1 359 519 3.0E-76 T 23-04-2016 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 PANTHER PTHR30244:SF1 2 181 3.0E-76 T 23-04-2016 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 PANTHER PTHR30244 359 519 3.0E-76 T 23-04-2016 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 PANTHER PTHR30244 2 181 3.0E-76 T 23-04-2016 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 Pfam PF00700 Bacterial flagellin C-terminal helical region 435 518 3.5E-26 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 Gene3D G3DSA:1.20.1330.10 421 475 2.0E-41 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 Gene3D G3DSA:1.20.1330.10 54 171 2.0E-41 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.0E-41 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 PRINTS PR00207 Flagellin signature 76 95 1.1E-18 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 PRINTS PR00207 Flagellin signature 37 54 1.1E-18 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CFF04554_RS08265 69d4c2eda1dd99890b324a0731018300 519 PRINTS PR00207 Flagellin signature 111 134 1.1E-18 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CFF04554_RS03390 02b115fd47f68a46110cbd108740b897 87 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 19 86 7.9E-13 T 23-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family CFF04554_RS03390 02b115fd47f68a46110cbd108740b897 87 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 23 87 6.2E-11 T 23-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 Pfam PF01750 Hydrogenase maturation protease 21 150 1.6E-27 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 SUPERFAMILY SSF53163 1 163 1.83E-40 T 23-04-2016 IPR023430 Peptidase HybD-like domain CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 PANTHER PTHR30302:SF1 1 166 1.5E-42 T 23-04-2016 CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 Gene3D G3DSA:3.40.50.1450 1 164 7.7E-55 T 23-04-2016 IPR023430 Peptidase HybD-like domain CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 152 1.7E-35 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 PANTHER PTHR30302 1 166 1.5E-42 T 23-04-2016 CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 PRINTS PR00446 Hydrogen uptake protein signature 3 15 3.8E-13 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 PRINTS PR00446 Hydrogen uptake protein signature 38 55 3.8E-13 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 PRINTS PR00446 Hydrogen uptake protein signature 59 69 3.8E-13 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 PRINTS PR00446 Hydrogen uptake protein signature 15 26 3.8E-13 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CFF04554_RS04685 adf94fbedfe9914fa31ddd02c45a3d9a 179 PRINTS PR00446 Hydrogen uptake protein signature 71 87 3.8E-13 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CFF04554_RS07065 f6a54af2083de0773d4369653c171415 350 SUPERFAMILY SSF53756 3 348 7.85E-56 T 23-04-2016 CFF04554_RS07065 f6a54af2083de0773d4369653c171415 350 PANTHER PTHR12526 1 350 1.3E-31 T 23-04-2016 CFF04554_RS07065 f6a54af2083de0773d4369653c171415 350 Pfam PF13439 Glycosyltransferase Family 4 12 151 3.5E-7 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07065 f6a54af2083de0773d4369653c171415 350 Pfam PF00534 Glycosyl transferases group 1 174 317 3.5E-30 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07065 f6a54af2083de0773d4369653c171415 350 Gene3D G3DSA:3.40.50.2000 176 316 2.6E-20 T 23-04-2016 CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 PANTHER PTHR10584:SF159 3 332 5.4E-94 T 23-04-2016 CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 SUPERFAMILY SSF52374 330 456 8.59E-25 T 23-04-2016 CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 Hamap MF_01603 Bifunctional protein HldE [hldE]. 1 458 39.608 T 23-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 3 303 4.0E-107 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 SUPERFAMILY SSF53613 1 302 1.12E-54 T 23-04-2016 IPR029056 Ribokinase-like CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 Gene3D G3DSA:3.40.1190.20 3 304 1.5E-59 T 23-04-2016 IPR029056 Ribokinase-like CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 Pfam PF00294 pfkB family carbohydrate kinase 3 295 6.5E-43 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 Gene3D G3DSA:3.40.50.620 329 439 4.4E-34 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 324 457 2.7E-59 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 Pfam PF01467 Cytidylyltransferase-like 334 425 1.2E-15 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 332 395 1.2E-15 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CFF04554_RS07190 6f76ba42540322a5e1d411d7372d4410 458 PANTHER PTHR10584 3 332 5.4E-94 T 23-04-2016 CFF04554_RS07625 db55ac5680724edc55a2d688051120af 300 PANTHER PTHR13774:SF21 1 300 3.6E-88 T 23-04-2016 CFF04554_RS07625 db55ac5680724edc55a2d688051120af 300 PIRSF PIRSF016184 1 300 2.5E-82 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CFF04554_RS07625 db55ac5680724edc55a2d688051120af 300 SUPERFAMILY SSF54506 3 298 3.46E-67 T 23-04-2016 CFF04554_RS07625 db55ac5680724edc55a2d688051120af 300 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 300 7.7E-87 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CFF04554_RS07625 db55ac5680724edc55a2d688051120af 300 Pfam PF02567 Phenazine biosynthesis-like protein 9 295 1.8E-70 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- CFF04554_RS07625 db55ac5680724edc55a2d688051120af 300 PANTHER PTHR13774 1 300 3.6E-88 T 23-04-2016 CFF04554_RS07625 db55ac5680724edc55a2d688051120af 300 Gene3D G3DSA:3.10.310.10 126 280 3.6E-43 T 23-04-2016 CFF04554_RS07625 db55ac5680724edc55a2d688051120af 300 Gene3D G3DSA:3.10.310.10 1 125 3.0E-40 T 23-04-2016 CFF04554_RS02090 05a6a57caef16ab37cb3e7ac8bfc5d15 263 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 254 1.5E-71 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CFF04554_RS02090 05a6a57caef16ab37cb3e7ac8bfc5d15 263 PANTHER PTHR30589 1 262 5.5E-72 T 23-04-2016 CFF04554_RS02090 05a6a57caef16ab37cb3e7ac8bfc5d15 263 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 251 7.7E-71 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CFF04554_RS02090 05a6a57caef16ab37cb3e7ac8bfc5d15 263 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 258 18.411 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CFF04554_RS02090 05a6a57caef16ab37cb3e7ac8bfc5d15 263 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CFF04554_RS02090 05a6a57caef16ab37cb3e7ac8bfc5d15 263 PANTHER PTHR30589:SF0 1 262 5.5E-72 T 23-04-2016 CFF04554_RS00475 18ce07e8e3b45def0c1c3795e73f7582 193 PIRSF PIRSF004553 8 193 1.4E-32 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS00475 18ce07e8e3b45def0c1c3795e73f7582 193 Pfam PF03602 Conserved hypothetical protein 95 11 191 2.1E-31 T 23-04-2016 CFF04554_RS00475 18ce07e8e3b45def0c1c3795e73f7582 193 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 192 4.3E-36 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS00475 18ce07e8e3b45def0c1c3795e73f7582 193 SUPERFAMILY SSF53335 10 190 1.89E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS00475 18ce07e8e3b45def0c1c3795e73f7582 193 Gene3D G3DSA:3.40.50.150 5 192 9.6E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 Gene3D G3DSA:3.40.605.10 1 216 7.6E-91 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 Gene3D G3DSA:3.40.605.10 366 407 7.6E-91 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 397 3.1E-135 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 Pfam PF00171 Aldehyde dehydrogenase family 10 277 3.6E-13 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 407 36.145 T 23-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 PANTHER PTHR11063:SF8 1 407 7.8E-163 T 23-04-2016 CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 SUPERFAMILY SSF53720 2 407 4.84E-97 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 PIRSF PIRSF000151 1 407 2.4E-159 T 23-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 PANTHER PTHR11063 1 407 7.8E-163 T 23-04-2016 CFF04554_RS03140 4a4f19793027380b2bbc6d79c74ccde1 407 Gene3D G3DSA:3.40.309.10 219 365 1.5E-38 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 PANTHER PTHR23076 2 643 1.0E-254 T 23-04-2016 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 121 613 1.5E-213 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 PANTHER PTHR23076:SF10 2 643 1.0E-254 T 23-04-2016 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 SMART SM00382 205 346 2.4E-24 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 Pfam PF01434 Peptidase family M41 405 612 1.5E-65 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 Gene3D G3DSA:1.10.8.60 353 419 7.1E-22 T 23-04-2016 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 ProSitePatterns PS00674 AAA-protein family signature. 314 332 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 SUPERFAMILY SSF52540 168 438 2.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 Gene3D G3DSA:3.40.50.300 166 352 1.3E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 342 1.6E-44 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 Pfam PF06480 FtsH Extracellular 25 100 4.5E-8 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 21 621 34.52 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CFF04554_RS06880 9031af77ae66ef8ec6e351dd84e55827 643 SUPERFAMILY SSF140990 426 616 1.22E-57 T 23-04-2016 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 Pfam PF00119 ATP synthase A chain 22 216 9.0E-48 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 PRINTS PR00123 ATP synthase A subunit signature 139 154 2.6E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 PRINTS PR00123 ATP synthase A subunit signature 79 95 2.6E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 PRINTS PR00123 ATP synthase A subunit signature 203 218 2.6E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 PRINTS PR00123 ATP synthase A subunit signature 159 181 2.6E-13 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 PANTHER PTHR11410:SF7 16 226 1.3E-56 T 23-04-2016 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 12 218 1.2E-38 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 PANTHER PTHR11410 16 226 1.3E-56 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 SUPERFAMILY SSF81336 73 216 6.93E-35 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 Gene3D G3DSA:1.20.120.220 73 220 6.7E-39 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 223 14.493 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CFF04554_RS03870 deb38a6b68361f9a7bd063ab832a3d63 226 ProSitePatterns PS00449 ATP synthase a subunit signature. 162 171 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 303 2.4E-94 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 Gene3D G3DSA:3.40.50.1370 148 281 5.2E-47 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 149 1.8E-38 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 5 306 39.622 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 9.96E-32 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 9.96E-32 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 260 265 9.96E-32 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 9.96E-32 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 80 89 9.96E-32 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 218 227 9.96E-32 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 3.69E-16 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 3.69E-16 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 3.69E-16 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 3.69E-16 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 301 4.9E-25 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 SUPERFAMILY SSF53671 2 305 3.14E-93 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PANTHER PTHR11405 6 303 6.3E-121 T 23-04-2016 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 PANTHER PTHR11405:SF16 6 303 6.3E-121 T 23-04-2016 CFF04554_RS07520 d627c1b1ea61591078f15138a6f8e346 310 Gene3D G3DSA:3.40.50.1370 6 147 6.6E-49 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CFF04554_RS01065 12120ec49cfe43676035c0c056966698 449 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 337 435 3.2E-14 T 23-04-2016 IPR033397 Metallo-carboxypeptidase, C-terminal domain CFF04554_RS01065 12120ec49cfe43676035c0c056966698 449 SUPERFAMILY SSF53187 197 275 1.98E-25 T 23-04-2016 CFF04554_RS01065 12120ec49cfe43676035c0c056966698 449 SUPERFAMILY SSF53187 28 164 1.98E-25 T 23-04-2016 CFF04554_RS01065 12120ec49cfe43676035c0c056966698 449 Gene3D G3DSA:3.40.630.10 27 246 6.2E-10 T 23-04-2016 CFF04554_RS01065 12120ec49cfe43676035c0c056966698 449 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 30 264 1.0E-86 T 23-04-2016 IPR031489 D,L-carboxypeptidase, peptidase domain CFF04554_RS06570 a793811cdd057bb27b4e1ae82733fe6e 537 PANTHER PTHR11819 28 526 8.0E-225 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS06570 a793811cdd057bb27b4e1ae82733fe6e 537 Pfam PF00474 Sodium:solute symporter family 58 456 2.7E-102 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS06570 a793811cdd057bb27b4e1ae82733fe6e 537 PANTHER PTHR11819:SF13 28 526 8.0E-225 T 23-04-2016 CFF04554_RS06570 a793811cdd057bb27b4e1ae82733fe6e 537 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 58 456 5.0E-56 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS06570 a793811cdd057bb27b4e1ae82733fe6e 537 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 173 198 - T 23-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CFF04554_RS05355 5f1897e6b9f4937b709fc45fdc7ed4a7 240 PANTHER PTHR21485:SF4 1 231 1.7E-74 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CFF04554_RS05355 5f1897e6b9f4937b709fc45fdc7ed4a7 240 PANTHER PTHR21485 1 231 1.7E-74 T 23-04-2016 CFF04554_RS05355 5f1897e6b9f4937b709fc45fdc7ed4a7 240 Pfam PF02348 Cytidylyltransferase 1 210 2.8E-42 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CFF04554_RS05355 5f1897e6b9f4937b709fc45fdc7ed4a7 240 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 229 1.3E-73 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CFF04554_RS05355 5f1897e6b9f4937b709fc45fdc7ed4a7 240 Gene3D G3DSA:3.90.550.10 2 231 8.6E-55 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS05355 5f1897e6b9f4937b709fc45fdc7ed4a7 240 SUPERFAMILY SSF53448 2 232 9.12E-41 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS00630 f6dbfd997c0102fad94330fd56bd2d7d 271 SUPERFAMILY SSF56770 26 159 4.19E-52 T 23-04-2016 CFF04554_RS00630 f6dbfd997c0102fad94330fd56bd2d7d 271 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 121 137 - T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 CFF04554_RS00630 f6dbfd997c0102fad94330fd56bd2d7d 271 PANTHER PTHR11995 1 193 9.2E-66 T 23-04-2016 CFF04554_RS00630 f6dbfd997c0102fad94330fd56bd2d7d 271 PANTHER PTHR11995:SF20 1 193 9.2E-66 T 23-04-2016 CFF04554_RS00630 f6dbfd997c0102fad94330fd56bd2d7d 271 Gene3D G3DSA:3.40.50.700 26 152 2.2E-31 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CFF04554_RS00630 f6dbfd997c0102fad94330fd56bd2d7d 271 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 38 147 1.5E-25 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CFF04554_RS04530 91e2d7192fda3ea1f81485d498cf9a1b 183 SUPERFAMILY SSF53323 5 181 1.83E-39 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CFF04554_RS04530 91e2d7192fda3ea1f81485d498cf9a1b 183 PANTHER PTHR32154:SF17 5 181 6.0E-28 T 23-04-2016 CFF04554_RS04530 91e2d7192fda3ea1f81485d498cf9a1b 183 PANTHER PTHR32154 5 181 6.0E-28 T 23-04-2016 CFF04554_RS04530 91e2d7192fda3ea1f81485d498cf9a1b 183 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 176 7.6E-31 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CFF04554_RS04530 91e2d7192fda3ea1f81485d498cf9a1b 183 Gene3D G3DSA:3.40.920.10 4 180 5.7E-36 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CFF04554_RS04150 4ba5ad59944b366eff0c42efa6396966 362 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 15 320 5.1E-23 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CFF04554_RS04150 4ba5ad59944b366eff0c42efa6396966 362 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 238 244 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CFF04554_RS04150 4ba5ad59944b366eff0c42efa6396966 362 Gene3D G3DSA:3.40.50.150 11 74 1.2E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04150 4ba5ad59944b366eff0c42efa6396966 362 Gene3D G3DSA:3.40.50.150 279 338 1.2E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04150 4ba5ad59944b366eff0c42efa6396966 362 Gene3D G3DSA:3.40.50.150 220 246 1.2E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04150 4ba5ad59944b366eff0c42efa6396966 362 SUPERFAMILY SSF53335 135 319 1.16E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04150 4ba5ad59944b366eff0c42efa6396966 362 SUPERFAMILY SSF53335 11 101 1.16E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04205 90a90d1f589f594db524d937b1e70952 269 PANTHER PTHR21666 136 267 5.8E-36 T 23-04-2016 CFF04554_RS04205 90a90d1f589f594db524d937b1e70952 269 SUPERFAMILY SSF51261 94 262 3.77E-48 T 23-04-2016 IPR011055 Duplicated hybrid motif CFF04554_RS04205 90a90d1f589f594db524d937b1e70952 269 Pfam PF01551 Peptidase family M23 164 258 2.6E-27 T 23-04-2016 IPR016047 Peptidase M23 CFF04554_RS04205 90a90d1f589f594db524d937b1e70952 269 Gene3D G3DSA:2.70.70.10 115 263 4.5E-42 T 23-04-2016 CFF04554_RS03595 56de21adb9dce57c1cc07f3f004abd53 685 Gene3D G3DSA:3.40.50.300 541 622 5.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03595 56de21adb9dce57c1cc07f3f004abd53 685 Gene3D G3DSA:3.40.50.300 282 388 5.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03595 56de21adb9dce57c1cc07f3f004abd53 685 SUPERFAMILY SSF52540 1 621 1.16E-150 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03595 56de21adb9dce57c1cc07f3f004abd53 685 Gene3D G3DSA:1.10.486.10 389 528 2.4E-35 T 23-04-2016 CFF04554_RS03595 56de21adb9dce57c1cc07f3f004abd53 685 Gene3D G3DSA:3.40.50.300 6 276 3.2E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03595 56de21adb9dce57c1cc07f3f004abd53 685 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 272 7.0E-66 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CFF04554_RS03595 56de21adb9dce57c1cc07f3f004abd53 685 PANTHER PTHR11070 1 621 9.5E-169 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CFF04554_RS03595 56de21adb9dce57c1cc07f3f004abd53 685 Pfam PF13361 UvrD-like helicase C-terminal domain 278 602 6.5E-65 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CFF04554_RS03595 56de21adb9dce57c1cc07f3f004abd53 685 PANTHER PTHR11070:SF7 1 621 9.5E-169 T 23-04-2016 CFF04554_RS05440 492b58ee7a24974d3a3b74458d454f1e 195 Gene3D G3DSA:3.20.10.10 91 185 2.8E-21 T 23-04-2016 CFF04554_RS05440 492b58ee7a24974d3a3b74458d454f1e 195 SUPERFAMILY SSF56752 10 186 1.96E-18 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CFF04554_RS05440 492b58ee7a24974d3a3b74458d454f1e 195 Gene3D G3DSA:3.30.470.10 9 78 5.5E-12 T 23-04-2016 CFF04554_RS05440 492b58ee7a24974d3a3b74458d454f1e 195 Pfam PF01063 Amino-transferase class IV 101 188 1.8E-11 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 Gene3D G3DSA:3.40.50.300 345 568 9.4E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 Gene3D G3DSA:1.20.1560.10 11 313 3.6E-44 T 23-04-2016 CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 PANTHER PTHR24222 6 583 2.1E-236 T 23-04-2016 CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 SUPERFAMILY SSF90123 11 318 1.22E-48 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 SMART SM00382 357 550 1.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 Pfam PF00005 ABC transporter 350 495 1.5E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 Pfam PF00664 ABC transporter transmembrane region 23 278 1.8E-14 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 16 556 3.5E-218 T 23-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 SUPERFAMILY SSF52540 320 555 2.13E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS02305 510ac9932ac8cdc186f8b4788eae29b4 583 PANTHER PTHR24222:SF0 6 583 2.1E-236 T 23-04-2016 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 CFF04554_RS06825 1da5cae9b683d7f11a5f9ad3753fbcd4 108 PANTHER PTHR30561 7 104 6.8E-14 T 23-04-2016 CFF04554_RS06825 1da5cae9b683d7f11a5f9ad3753fbcd4 108 SUPERFAMILY SSF103481 8 106 7.32E-9 T 23-04-2016 CFF04554_RS06825 1da5cae9b683d7f11a5f9ad3753fbcd4 108 PANTHER PTHR30561:SF0 7 104 6.8E-14 T 23-04-2016 CFF04554_RS06825 1da5cae9b683d7f11a5f9ad3753fbcd4 108 Pfam PF00893 Small Multidrug Resistance protein 8 95 9.4E-10 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 Pfam PF00989 PAS fold 20 115 2.0E-13 T 23-04-2016 IPR013767 PAS fold GO:0006355 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 Gene3D G3DSA:3.30.565.10 255 402 1.1E-33 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 SMART SM00091 6 75 4.5E-5 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 Gene3D G3DSA:3.30.450.20 21 121 3.5E-25 T 23-04-2016 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 PANTHER PTHR24423 182 402 1.4E-52 T 23-04-2016 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 PANTHER PTHR24423 1 136 1.4E-52 T 23-04-2016 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 SUPERFAMILY SSF55874 253 403 2.36E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 SUPERFAMILY SSF47384 182 250 2.75E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 7.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 402 7.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 7.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 7.1E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 SUPERFAMILY SSF55785 18 119 7.85E-27 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 SMART SM00387 294 405 1.4E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 129 2.5E-20 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 296 402 7.0E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01885 17a1afd0f8c54ee1b26a2cdfdd702716 412 SMART SM00086 80 122 0.0026 T 23-04-2016 IPR001610 PAC motif CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 422 1.6E-170 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 PANTHER PTHR11986:SF5 4 423 1.9E-180 T 23-04-2016 CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 Gene3D G3DSA:3.90.1150.10 2 68 2.1E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 Gene3D G3DSA:3.90.1150.10 317 422 2.1E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 PANTHER PTHR11986 4 423 1.9E-180 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 231 267 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 2 423 92.343 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 SUPERFAMILY SSF53383 3 422 2.42E-113 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 Pfam PF00202 Aminotransferase class-III 30 392 6.7E-67 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS06070 480c61375335d2cd39620193cdc57751 423 Gene3D G3DSA:3.40.640.10 69 312 4.8E-70 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 Gene3D G3DSA:3.40.50.720 1 206 4.7E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 PIRSF PIRSF000124 1 438 2.0E-152 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 SMART SM00984 320 423 1.5E-45 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 Gene3D G3DSA:3.40.50.720 235 438 1.6E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 PANTHER PTHR11374 1 441 3.3E-240 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 419 2.6E-139 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 179 7.5E-67 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 PIRSF PIRSF500134 1 440 5.4E-190 T 23-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 SUPERFAMILY SSF52413 306 434 4.05E-38 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 Gene3D G3DSA:1.20.5.100 207 234 6.8E-19 T 23-04-2016 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 PANTHER PTHR11374:SF18 1 441 3.3E-240 T 23-04-2016 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 SUPERFAMILY SSF48179 204 298 1.02E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 8.4E-39 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 SUPERFAMILY SSF51735 1 195 9.51E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07075 283b60e92463dff9d2858a1b88667c4e 442 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 423 1.4E-30 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 Pfam PF05746 DALR anticodon binding domain 415 529 3.4E-25 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 SUPERFAMILY SSF55190 7 87 1.18E-13 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 SUPERFAMILY SSF47323 409 529 1.37E-22 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 136 8.2E-23 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 105 120 8.2E-23 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 284 305 8.2E-23 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 144 157 8.2E-23 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 SMART SM01016 3 76 5.2E-16 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 529 22.727 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 PANTHER PTHR11956 1 529 4.0E-145 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 PANTHER PTHR11956:SF6 1 529 4.0E-145 T 23-04-2016 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 Pfam PF00750 tRNA synthetases class I (R) 93 391 1.3E-20 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 115 124 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 SUPERFAMILY SSF52374 99 425 4.79E-77 T 23-04-2016 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 SMART SM00836 415 529 3.9E-28 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 17 529 3.3E-124 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 14 76 8.1E-13 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 Gene3D G3DSA:3.30.1360.70 1 90 2.0E-18 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 Gene3D G3DSA:1.10.730.10 421 529 1.1E-24 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS07305 ea10c7cf50e596ccf51846f0e27a40f5 531 Gene3D G3DSA:3.40.50.620 99 420 1.5E-85 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 122 140 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 Gene3D G3DSA:3.30.190.20 162 227 7.5E-45 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 Gene3D G3DSA:3.30.190.20 18 69 7.5E-45 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 230 42.244 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 Gene3D G3DSA:3.40.50.790 70 160 2.8E-39 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 PANTHER PTHR23105:SF5 20 232 6.8E-78 T 23-04-2016 CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 PIRSF PIRSF002155 1 228 1.5E-74 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 SUPERFAMILY SSF56808 7 226 1.44E-80 T 23-04-2016 IPR023674 Ribosomal protein L1-like CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 PANTHER PTHR23105 20 232 6.8E-78 T 23-04-2016 CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 229 3.0E-103 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CFF04554_RS06740 aadf3fea617b2ff80dfc19ffba33ed8d 234 Pfam PF00687 Ribosomal protein L1p/L10e family 32 221 9.0E-55 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CFF04554_RS00535 d3c3adbc05ffb0453b4ec5f982a1ec13 557 SUPERFAMILY SSF53955 386 535 9.5E-34 T 23-04-2016 IPR023346 Lysozyme-like domain CFF04554_RS00535 d3c3adbc05ffb0453b4ec5f982a1ec13 557 Gene3D G3DSA:1.10.530.10 386 535 2.2E-32 T 23-04-2016 CFF04554_RS00535 d3c3adbc05ffb0453b4ec5f982a1ec13 557 PANTHER PTHR21666 357 553 9.5E-20 T 23-04-2016 CFF04554_RS00535 d3c3adbc05ffb0453b4ec5f982a1ec13 557 Pfam PF01464 Transglycosylase SLT domain 386 480 5.6E-20 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CFF04554_RS00535 d3c3adbc05ffb0453b4ec5f982a1ec13 557 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 392 420 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CFF04554_RS08405 f68ab78742e775ef11dcc6f7a7e1e385 165 Gene3D G3DSA:3.30.70.860 101 165 3.9E-26 T 23-04-2016 CFF04554_RS08405 f68ab78742e775ef11dcc6f7a7e1e385 165 SUPERFAMILY SSF89963 5 91 1.14E-25 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CFF04554_RS08405 f68ab78742e775ef11dcc6f7a7e1e385 165 PANTHER PTHR30476:SF0 3 163 4.8E-49 T 23-04-2016 CFF04554_RS08405 f68ab78742e775ef11dcc6f7a7e1e385 165 SUPERFAMILY SSF89963 96 165 1.7E-22 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CFF04554_RS08405 f68ab78742e775ef11dcc6f7a7e1e385 165 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 165 22.704 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CFF04554_RS08405 f68ab78742e775ef11dcc6f7a7e1e385 165 PANTHER PTHR30476 3 163 4.8E-49 T 23-04-2016 CFF04554_RS08405 f68ab78742e775ef11dcc6f7a7e1e385 165 Pfam PF04461 Protein of unknown function (DUF520) 5 165 5.5E-55 T 23-04-2016 IPR007551 Protein of unknown function DUF520 CFF04554_RS08405 f68ab78742e775ef11dcc6f7a7e1e385 165 Gene3D G3DSA:3.30.70.990 13 100 3.5E-28 T 23-04-2016 CFF04554_RS08660 fc9ce8b459086fc64b4c67576d5b0c7a 88 Gene3D G3DSA:1.20.58.110 1 86 3.7E-25 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS08660 fc9ce8b459086fc64b4c67576d5b0c7a 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.4E-25 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS08660 fc9ce8b459086fc64b4c67576d5b0c7a 88 PANTHER PTHR33398 1 88 4.1E-22 T 23-04-2016 CFF04554_RS08660 fc9ce8b459086fc64b4c67576d5b0c7a 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 88 7.0E-16 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS08660 fc9ce8b459086fc64b4c67576d5b0c7a 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 14.729 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS08660 fc9ce8b459086fc64b4c67576d5b0c7a 88 Pfam PF01649 Ribosomal protein S20 2 83 9.5E-24 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS08660 fc9ce8b459086fc64b4c67576d5b0c7a 88 SUPERFAMILY SSF46992 3 86 1.31E-24 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07530 1ea2cdb1c1354095a9c8e29eda9f6c15 156 SUPERFAMILY SSF54523 18 113 2.93E-5 T 23-04-2016 CFF04554_RS05095 0245d677c0617dc73aefa35229195386 69 Gene3D G3DSA:2.30.30.40 2 69 4.2E-31 T 23-04-2016 CFF04554_RS05095 0245d677c0617dc73aefa35229195386 69 PANTHER PTHR30305 1 69 2.0E-24 T 23-04-2016 CFF04554_RS05095 0245d677c0617dc73aefa35229195386 69 PANTHER PTHR30305:SF3 1 69 2.0E-24 T 23-04-2016 CFF04554_RS05095 0245d677c0617dc73aefa35229195386 69 SUPERFAMILY SSF82057 2 69 1.33E-23 T 23-04-2016 CFF04554_RS05095 0245d677c0617dc73aefa35229195386 69 Pfam PF03831 PhnA domain 3 69 1.6E-29 T 23-04-2016 IPR013988 PhnA protein, C-terminal CFF04554_RS05020 ec962077a82ce4578b31fa5c362d4198 171 PANTHER PTHR32089 45 129 2.8E-16 T 23-04-2016 CFF04554_RS05020 ec962077a82ce4578b31fa5c362d4198 171 SUPERFAMILY SSF55785 19 114 1.03E-21 T 23-04-2016 IPR000014 PAS domain CFF04554_RS05020 ec962077a82ce4578b31fa5c362d4198 171 Gene3D G3DSA:3.30.450.20 18 114 1.2E-17 T 23-04-2016 CFF04554_RS05020 ec962077a82ce4578b31fa5c362d4198 171 PANTHER PTHR32089:SF52 45 129 2.8E-16 T 23-04-2016 CFF04554_RS05020 ec962077a82ce4578b31fa5c362d4198 171 Pfam PF00989 PAS fold 22 110 3.0E-12 T 23-04-2016 IPR013767 PAS fold GO:0006355 CFF04554_RS05020 ec962077a82ce4578b31fa5c362d4198 171 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 113 2.0E-6 T 23-04-2016 IPR000014 PAS domain CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 312 2.0E-16 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 SMART SM00662 23 229 9.1E-64 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 SUPERFAMILY SSF56553 53 173 4.84E-31 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 SUPERFAMILY SSF47789 249 317 3.66E-20 T 23-04-2016 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 Gene3D G3DSA:2.170.120.12 53 172 1.5E-33 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 PANTHER PTHR32108 9 327 6.2E-70 T 23-04-2016 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 PANTHER PTHR32108:SF0 9 327 6.2E-70 T 23-04-2016 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 222 1.6E-11 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 242 305 2.3E-23 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 Gene3D G3DSA:1.10.150.20 245 315 1.8E-23 T 23-04-2016 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 155 3.3E-19 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 SUPERFAMILY SSF55257 174 228 4.32E-22 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 SUPERFAMILY SSF55257 10 53 4.32E-22 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 Gene3D G3DSA:3.30.1360.10 10 51 4.0E-5 T 23-04-2016 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 Gene3D G3DSA:3.30.1360.10 191 231 3.5E-4 T 23-04-2016 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 314 30.022 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS00295 dcc9f905436baef7591882f463f4a277 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 313 4.5E-91 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS02440 4fa54e0972150496376769da076ab672 263 Pfam PF01061 ABC-2 type transporter 16 223 3.0E-22 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 CFF04554_RS02440 4fa54e0972150496376769da076ab672 263 PANTHER PTHR30413 1 263 7.4E-72 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CFF04554_RS02440 4fa54e0972150496376769da076ab672 263 PANTHER PTHR30413:SF8 1 263 7.4E-72 T 23-04-2016 CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 PANTHER PTHR11938:SF111 121 153 8.9E-24 T 23-04-2016 CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 15 26 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 Gene3D G3DSA:3.30.70.20 9 65 1.6E-9 T 23-04-2016 CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 Gene3D G3DSA:3.30.70.20 92 163 3.1E-14 T 23-04-2016 CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 SUPERFAMILY SSF54862 3 169 2.72E-35 T 23-04-2016 CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 Pfam PF13247 4Fe-4S dicluster domain 49 103 3.6E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 Pfam PF12798 4Fe-4S binding domain 134 151 0.016 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 85 96 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 Pfam PF00037 4Fe-4S binding domain 11 29 6.7E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 Gene3D G3DSA:3.30.70.20 66 91 8.6E-18 T 23-04-2016 CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 PANTHER PTHR11938 121 153 8.9E-24 T 23-04-2016 CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 PANTHER PTHR11938:SF111 6 104 8.9E-24 T 23-04-2016 CFF04554_RS00665 57c3c9849f27927efe2958e9ec198db0 211 PANTHER PTHR11938 6 104 8.9E-24 T 23-04-2016 CFF04554_RS02825 feb2961cb55d8e26c3096e8736cafd7c 485 Pfam PF13145 PPIC-type PPIASE domain 240 357 6.1E-17 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CFF04554_RS02825 feb2961cb55d8e26c3096e8736cafd7c 485 PANTHER PTHR10657 1 167 4.6E-20 T 23-04-2016 CFF04554_RS02825 feb2961cb55d8e26c3096e8736cafd7c 485 PANTHER PTHR10657 234 378 4.6E-20 T 23-04-2016 CFF04554_RS02825 feb2961cb55d8e26c3096e8736cafd7c 485 Pfam PF13624 SurA N-terminal domain 1 164 1.4E-46 T 23-04-2016 CFF04554_RS02825 feb2961cb55d8e26c3096e8736cafd7c 485 Gene3D G3DSA:3.10.50.40 318 367 1.8E-4 T 23-04-2016 CFF04554_RS02825 feb2961cb55d8e26c3096e8736cafd7c 485 SUPERFAMILY SSF109998 234 297 5.1E-20 T 23-04-2016 IPR027304 Trigger factor/SurA domain CFF04554_RS02825 feb2961cb55d8e26c3096e8736cafd7c 485 SUPERFAMILY SSF109998 43 168 5.1E-20 T 23-04-2016 IPR027304 Trigger factor/SurA domain CFF04554_RS02825 feb2961cb55d8e26c3096e8736cafd7c 485 PANTHER PTHR10657:SF11 1 167 4.6E-20 T 23-04-2016 CFF04554_RS02825 feb2961cb55d8e26c3096e8736cafd7c 485 PANTHER PTHR10657:SF11 234 378 4.6E-20 T 23-04-2016 CFF04554_RS08080 201d711e8c16a353a3e6c645b7fa606d 353 PANTHER PTHR11228 25 311 4.2E-29 T 23-04-2016 CFF04554_RS08080 201d711e8c16a353a3e6c645b7fa606d 353 SMART SM00729 29 243 0.0026 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS08080 201d711e8c16a353a3e6c645b7fa606d 353 SUPERFAMILY SSF102114 27 326 4.97E-46 T 23-04-2016 CFF04554_RS08080 201d711e8c16a353a3e6c645b7fa606d 353 Pfam PF13353 4Fe-4S single cluster domain 38 150 4.5E-6 T 23-04-2016 CFF04554_RS08080 201d711e8c16a353a3e6c645b7fa606d 353 Gene3D G3DSA:3.20.20.70 27 331 1.8E-46 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS08080 201d711e8c16a353a3e6c645b7fa606d 353 Pfam PF04055 Radical SAM superfamily 33 197 1.7E-20 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS05230 3fc52c86b6c538b6f28593913f686b93 172 SMART SM00248 115 144 230.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS05230 3fc52c86b6c538b6f28593913f686b93 172 SMART SM00248 49 78 0.0064 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS05230 3fc52c86b6c538b6f28593913f686b93 172 SMART SM00248 82 111 2.8E-4 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS05230 3fc52c86b6c538b6f28593913f686b93 172 Gene3D G3DSA:1.25.40.20 24 149 2.0E-29 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain CFF04554_RS05230 3fc52c86b6c538b6f28593913f686b93 172 Pfam PF12796 Ankyrin repeats (3 copies) 54 138 2.3E-13 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain CFF04554_RS05230 3fc52c86b6c538b6f28593913f686b93 172 PANTHER PTHR24123 33 136 4.3E-30 T 23-04-2016 CFF04554_RS05230 3fc52c86b6c538b6f28593913f686b93 172 PRINTS PR01415 Ankyrin repeat signature 98 112 8.8E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS05230 3fc52c86b6c538b6f28593913f686b93 172 PRINTS PR01415 Ankyrin repeat signature 50 65 8.8E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS05230 3fc52c86b6c538b6f28593913f686b93 172 SUPERFAMILY SSF48403 24 139 1.14E-29 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 Gene3D G3DSA:1.20.1270.20 38 121 1.4E-29 T 23-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 Pfam PF03063 Prismane/CO dehydrogenase family 8 90 5.0E-14 T 23-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 Pfam PF03063 Prismane/CO dehydrogenase family 91 430 2.7E-99 T 23-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 PANTHER PTHR30109 33 442 9.2E-177 T 23-04-2016 CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 Gene3D G3DSA:3.40.50.2030 124 270 2.4E-57 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 Hamap MF_00069 Hydroxylamine reductase [hcp]. 8 443 15.966 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 SUPERFAMILY SSF56821 6 431 6.41E-138 T 23-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 Gene3D G3DSA:3.40.50.2030 271 431 1.3E-59 T 23-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 35 440 6.9E-160 T 23-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CFF04554_RS04590 80794e074e2a73bd14683c2c093eefaf 444 PANTHER PTHR30109:SF0 33 442 9.2E-177 T 23-04-2016 CFF04554_RS04285 08c7be579a4ed82c099374911ba6e208 346 Gene3D G3DSA:3.40.50.1970 21 162 7.8E-55 T 23-04-2016 CFF04554_RS04285 08c7be579a4ed82c099374911ba6e208 346 SUPERFAMILY SSF56796 19 342 2.36E-98 T 23-04-2016 CFF04554_RS04285 08c7be579a4ed82c099374911ba6e208 346 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 344 38.757 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CFF04554_RS04285 08c7be579a4ed82c099374911ba6e208 346 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 22 340 1.5E-113 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CFF04554_RS04285 08c7be579a4ed82c099374911ba6e208 346 PANTHER PTHR21090 17 346 4.0E-140 T 23-04-2016 CFF04554_RS04285 08c7be579a4ed82c099374911ba6e208 346 Pfam PF01761 3-dehydroquinate synthase 58 311 3.2E-100 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CFF04554_RS04285 08c7be579a4ed82c099374911ba6e208 346 Gene3D G3DSA:1.20.1090.10 164 342 2.3E-57 T 23-04-2016 CFF04554_RS04285 08c7be579a4ed82c099374911ba6e208 346 PIRSF PIRSF001455 6 345 3.4E-103 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 PANTHER PTHR30295 3 144 6.0E-34 T 23-04-2016 CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 8.2E-12 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 26 42 8.2E-12 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 50 66 8.2E-12 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 Gene3D G3DSA:1.20.1260.10 2 144 8.9E-43 T 23-04-2016 IPR012347 Ferritin-related CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 PANTHER PTHR30295:SF6 3 144 6.0E-34 T 23-04-2016 CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 ProSitePatterns PS00819 Dps protein family signature 2. 52 66 - T 23-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 PIRSF PIRSF005900 1 145 3.4E-42 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 SUPERFAMILY SSF47240 3 144 9.43E-38 T 23-04-2016 IPR009078 Ferritin-like superfamily CFF04554_RS00400 4aad1e2eefff89d8cc63ed6a2dede906 145 Pfam PF00210 Ferritin-like domain 6 144 5.4E-28 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 SUPERFAMILY SSF50891 18 153 9.35E-48 T 23-04-2016 IPR029000 Cyclophilin-like domain CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 128 143 3.4E-24 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 115 3.4E-24 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 127 3.4E-24 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 34 49 3.4E-24 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 60 72 3.4E-24 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 21 153 4.7E-38 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 PANTHER PTHR11071 21 148 7.4E-44 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 55 72 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 Gene3D G3DSA:2.40.100.10 14 152 1.2E-47 T 23-04-2016 IPR029000 Cyclophilin-like domain CFF04554_RS02130 b23ef47605f4f53801e891da1cfc9913 163 PIRSF PIRSF001467 6 163 4.2E-40 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CFF04554_RS07200 09db12adaf54f236cd79a7f2419d2423 168 PANTHER PTHR23133:SF3 5 143 4.5E-49 T 23-04-2016 CFF04554_RS07200 09db12adaf54f236cd79a7f2419d2423 168 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 142 2.5E-34 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CFF04554_RS07200 09db12adaf54f236cd79a7f2419d2423 168 SUPERFAMILY SSF56784 1 148 3.53E-43 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS07200 09db12adaf54f236cd79a7f2419d2423 168 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 5 155 2.8E-58 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CFF04554_RS07200 09db12adaf54f236cd79a7f2419d2423 168 PANTHER PTHR23133 5 143 4.5E-49 T 23-04-2016 CFF04554_RS07200 09db12adaf54f236cd79a7f2419d2423 168 Pfam PF13242 HAD-hyrolase-like 101 144 1.9E-10 T 23-04-2016 CFF04554_RS07200 09db12adaf54f236cd79a7f2419d2423 168 PIRSF PIRSF004682 1 163 6.4E-59 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CFF04554_RS07200 09db12adaf54f236cd79a7f2419d2423 168 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 146 1.1E-41 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CFF04554_RS07200 09db12adaf54f236cd79a7f2419d2423 168 Gene3D G3DSA:3.40.50.1000 1 156 3.8E-53 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS02180 6efd77907b99b3685db265571f0dc7f7 602 Pfam PF05935 Arylsulfotransferase (ASST) 44 590 2.6E-185 T 23-04-2016 IPR010262 Arylsulfotransferase CFF04554_RS04495 b7dffa3acfdca1f60d85ebdefa28e168 333 SUPERFAMILY SSF53448 3 240 4.22E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS04495 b7dffa3acfdca1f60d85ebdefa28e168 333 PANTHER PTHR22916:SF24 3 271 1.9E-52 T 23-04-2016 CFF04554_RS04495 b7dffa3acfdca1f60d85ebdefa28e168 333 PANTHER PTHR22916 3 271 1.9E-52 T 23-04-2016 CFF04554_RS04495 b7dffa3acfdca1f60d85ebdefa28e168 333 Gene3D G3DSA:3.90.550.10 3 203 7.7E-50 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS04495 b7dffa3acfdca1f60d85ebdefa28e168 333 Pfam PF00535 Glycosyl transferase family 2 5 144 2.6E-33 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 SUPERFAMILY SSF46785 2 103 8.84E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 SUPERFAMILY SSF50331 197 262 4.04E-16 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 SUPERFAMILY SSF50331 122 193 5.35E-19 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 Gene3D G3DSA:1.10.10.10 1 124 1.7E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 197 262 2.7E-17 T 23-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 122 190 9.8E-20 T 23-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 Pfam PF03459 TOBE domain 199 259 1.1E-11 T 23-04-2016 IPR005116 Transport-associated OB, type 1 CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 Pfam PF03459 TOBE domain 125 185 3.9E-12 T 23-04-2016 IPR005116 Transport-associated OB, type 1 CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 Gene3D G3DSA:2.40.50.100 196 262 8.3E-22 T 23-04-2016 CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 Gene3D G3DSA:2.40.50.100 125 190 2.5E-25 T 23-04-2016 CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 PANTHER PTHR30432 1 263 2.9E-28 T 23-04-2016 CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 70 5.2E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CFF04554_RS01820 4e71e294f928942de712942df88947ec 263 PIRSF PIRSF005763 1 263 1.8E-65 T 23-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 CFF04554_RS02020 2e4fab3b012270f42e51c6842110b460 231 PANTHER PTHR24220 3 230 2.9E-112 T 23-04-2016 CFF04554_RS02020 2e4fab3b012270f42e51c6842110b460 231 PANTHER PTHR24220:SF568 3 230 2.9E-112 T 23-04-2016 CFF04554_RS02020 2e4fab3b012270f42e51c6842110b460 231 Gene3D G3DSA:3.40.50.300 1 225 1.5E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02020 2e4fab3b012270f42e51c6842110b460 231 SMART SM00382 26 208 1.1E-5 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02020 2e4fab3b012270f42e51c6842110b460 231 SUPERFAMILY SSF52540 2 226 1.95E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02020 2e4fab3b012270f42e51c6842110b460 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS02020 2e4fab3b012270f42e51c6842110b460 231 Pfam PF00005 ABC transporter 18 159 4.9E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 SUPERFAMILY SSF74731 3 117 4.84E-46 T 23-04-2016 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 72 8.0E-10 T 23-04-2016 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 5.4E-39 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 5.4E-39 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 5.4E-39 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 PANTHER PTHR10986 2 117 6.7E-58 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.793 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.0E-49 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 PANTHER PTHR10986:SF12 2 117 6.7E-58 T 23-04-2016 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 Gene3D G3DSA:1.10.1900.20 55 117 1.2E-29 T 23-04-2016 CFF04554_RS00570 0279d3d9f744aa02485f75c2bea791b6 117 Pfam PF00453 Ribosomal protein L20 3 109 5.7E-45 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00575 0c0dcbc06f9e5e57c10197c4d62e5baf 63 Pfam PF01632 Ribosomal protein L35 2 61 5.1E-22 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00575 0c0dcbc06f9e5e57c10197c4d62e5baf 63 PANTHER PTHR33343 1 61 3.7E-19 T 23-04-2016 CFF04554_RS00575 0c0dcbc06f9e5e57c10197c4d62e5baf 63 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.394 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00575 0c0dcbc06f9e5e57c10197c4d62e5baf 63 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00575 0c0dcbc06f9e5e57c10197c4d62e5baf 63 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 2.3E-22 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00575 0c0dcbc06f9e5e57c10197c4d62e5baf 63 PRINTS PR00064 Ribosomal protein L35 signature 35 53 1.3E-12 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00575 0c0dcbc06f9e5e57c10197c4d62e5baf 63 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.3E-12 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00575 0c0dcbc06f9e5e57c10197c4d62e5baf 63 PRINTS PR00064 Ribosomal protein L35 signature 20 34 1.3E-12 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00575 0c0dcbc06f9e5e57c10197c4d62e5baf 63 SUPERFAMILY SSF143034 2 62 4.97E-19 T 23-04-2016 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 308 1.9E-133 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 92 4.6E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 127 143 4.6E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 162 175 4.6E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 146 159 4.6E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 124 4.6E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 190 199 4.6E-43 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 141 7.9E-47 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 PANTHER PTHR22855 6 309 3.5E-103 T 23-04-2016 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 SUPERFAMILY SSF52096 31 309 6.32E-89 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 PANTHER PTHR22855:SF42 6 309 3.5E-103 T 23-04-2016 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 309 44.062 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS06960 3237eb1873a9a6fcdaba1398b0edd721 310 Gene3D G3DSA:3.90.226.10 49 293 3.8E-46 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 PRINTS PR01009 Flagellar M-ring protein signature 270 288 1.4E-27 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 PRINTS PR01009 Flagellar M-ring protein signature 199 217 1.4E-27 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 PRINTS PR01009 Flagellar M-ring protein signature 124 142 1.4E-27 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 PRINTS PR01009 Flagellar M-ring protein signature 156 170 1.4E-27 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 PRINTS PR01009 Flagellar M-ring protein signature 343 367 1.4E-27 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 PANTHER PTHR30046 1 561 3.6E-110 T 23-04-2016 CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 Pfam PF08345 Flagellar M-ring protein C-terminal 262 425 2.4E-38 T 23-04-2016 IPR013556 Flagellar M-ring C-terminal CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 PIRSF PIRSF004862 1 561 2.7E-120 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 9 559 9.0E-123 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 Pfam PF01514 Secretory protein of YscJ/FliF family 29 220 1.3E-60 T 23-04-2016 IPR006182 Secretory protein YscJ/FliF CFF04554_RS01330 6ffac3115af5a8bfc07ca2be09c474ad 568 PANTHER PTHR30046:SF0 1 561 3.6E-110 T 23-04-2016 CFF04554_RS00355 ccf765cefddfdbd3240390c133c625dc 66 Pfam PF04328 Protein of unknown function (DUF466) 9 63 7.3E-19 T 23-04-2016 IPR007423 Protein of unknown function DUF466 CFF04554_RS05745 03b73ddd99cdf37bbc08aea872fde63d 233 SUPERFAMILY SSF53335 50 158 3.09E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05745 03b73ddd99cdf37bbc08aea872fde63d 233 Pfam PF01728 FtsJ-like methyltransferase 54 219 2.1E-13 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CFF04554_RS05745 03b73ddd99cdf37bbc08aea872fde63d 233 Gene3D G3DSA:3.40.50.150 88 144 7.8E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05745 03b73ddd99cdf37bbc08aea872fde63d 233 Gene3D G3DSA:3.10.290.10 1 87 5.7E-14 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS05745 03b73ddd99cdf37bbc08aea872fde63d 233 PANTHER PTHR32319 14 229 4.9E-53 T 23-04-2016 CFF04554_RS05745 03b73ddd99cdf37bbc08aea872fde63d 233 PANTHER PTHR32319:SF0 14 229 4.9E-53 T 23-04-2016 CFF04554_RS05745 03b73ddd99cdf37bbc08aea872fde63d 233 SUPERFAMILY SSF55174 1 52 3.83E-9 T 23-04-2016 CFF04554_RS05745 03b73ddd99cdf37bbc08aea872fde63d 233 SMART SM00363 1 63 4.3E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS05745 03b73ddd99cdf37bbc08aea872fde63d 233 Pfam PF01479 S4 domain 1 47 1.8E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS04645 ff236c54d1f592a48f46bf31b1e6f06c 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 2.2E-26 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CFF04554_RS04645 ff236c54d1f592a48f46bf31b1e6f06c 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 22.17 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CFF04554_RS04645 ff236c54d1f592a48f46bf31b1e6f06c 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 23-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CFF04554_RS04645 ff236c54d1f592a48f46bf31b1e6f06c 113 PIRSF PIRSF004761 1 113 1.7E-32 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CFF04554_RS04645 ff236c54d1f592a48f46bf31b1e6f06c 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 7.2E-30 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CFF04554_RS04645 ff236c54d1f592a48f46bf31b1e6f06c 113 PANTHER PTHR34535:SF3 2 113 1.3E-30 T 23-04-2016 CFF04554_RS04645 ff236c54d1f592a48f46bf31b1e6f06c 113 PANTHER PTHR34535 2 113 1.3E-30 T 23-04-2016 CFF04554_RS04890 0d62c675b905db53a1b34a667af5545a 243 Pfam PF01544 CorA-like Mg2+ transporter protein 64 234 3.4E-24 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CFF04554_RS04890 0d62c675b905db53a1b34a667af5545a 243 Gene3D G3DSA:1.20.58.340 168 235 1.2E-15 T 23-04-2016 CFF04554_RS04890 0d62c675b905db53a1b34a667af5545a 243 SUPERFAMILY SSF144083 177 234 2.75E-12 T 23-04-2016 CFF04554_RS01270 57d1d3ef84e6a4414a8802697bb1a4bb 387 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 2 383 2.1E-120 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CFF04554_RS01270 57d1d3ef84e6a4414a8802697bb1a4bb 387 PANTHER PTHR30008:SF0 1 356 4.8E-114 T 23-04-2016 CFF04554_RS01270 57d1d3ef84e6a4414a8802697bb1a4bb 387 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 1 386 23.317 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CFF04554_RS01270 57d1d3ef84e6a4414a8802697bb1a4bb 387 Pfam PF13742 OB-fold nucleic acid binding domain 1 93 1.9E-26 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CFF04554_RS01270 57d1d3ef84e6a4414a8802697bb1a4bb 387 Pfam PF02601 Exonuclease VII, large subunit 117 354 4.5E-67 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CFF04554_RS01270 57d1d3ef84e6a4414a8802697bb1a4bb 387 PANTHER PTHR30008 1 356 4.8E-114 T 23-04-2016 CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 SUPERFAMILY SSF55920 67 340 6.28E-65 T 23-04-2016 IPR000994 Peptidase M24, structural domain CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 PRINTS PR00599 Methionine aminopeptidase-1 signature 302 314 2.2E-6 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 PRINTS PR00599 Methionine aminopeptidase-1 signature 172 185 2.2E-6 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 210 2.2E-6 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 Gene3D G3DSA:3.40.350.10 4 99 5.6E-5 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 PANTHER PTHR10804 110 340 4.7E-71 T 23-04-2016 CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 Gene3D G3DSA:3.90.230.10 111 340 1.3E-72 T 23-04-2016 IPR000994 Peptidase M24, structural domain CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 Pfam PF00557 Metallopeptidase family M24 121 334 6.6E-55 T 23-04-2016 IPR000994 Peptidase M24, structural domain CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 PANTHER PTHR10804:SF110 110 340 4.7E-71 T 23-04-2016 CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 280 292 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CFF04554_RS07665 f36bdaab39fc93761baf65a53882f616 340 SUPERFAMILY SSF53092 5 100 2.14E-5 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 SUPERFAMILY SSF52096 199 373 1.01E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 SUPERFAMILY SSF52096 45 124 1.01E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 Pfam PF13180 PDZ domain 106 185 8.4E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 Gene3D G3DSA:3.30.750.44 71 111 1.2E-5 T 23-04-2016 CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 Pfam PF03572 Peptidase family S41 205 365 4.2E-53 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 Gene3D G3DSA:3.90.226.10 413 432 5.8E-64 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 Gene3D G3DSA:3.90.226.10 189 369 5.8E-64 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 Gene3D G3DSA:2.30.42.10 112 188 6.6E-28 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 PANTHER PTHR32060 53 437 3.2E-108 T 23-04-2016 CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 65 384 1.7E-109 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 SMART SM00245 179 367 1.4E-77 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 SMART SM00228 106 177 2.0E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS04720 55629e869905d0aa72b46aa651a5c83d 437 SUPERFAMILY SSF50156 103 203 4.39E-23 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS05280 f0c6e4edbf41704b29674d98bcdc10cb 367 PANTHER PTHR34389:SF3 256 366 1.3E-25 T 23-04-2016 CFF04554_RS05280 f0c6e4edbf41704b29674d98bcdc10cb 367 Pfam PF04909 Amidohydrolase 121 258 2.6E-13 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CFF04554_RS05280 f0c6e4edbf41704b29674d98bcdc10cb 367 Gene3D G3DSA:3.20.20.140 3 260 5.3E-26 T 23-04-2016 CFF04554_RS05280 f0c6e4edbf41704b29674d98bcdc10cb 367 SUPERFAMILY SSF54909 262 366 1.55E-24 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel CFF04554_RS05280 f0c6e4edbf41704b29674d98bcdc10cb 367 Pfam PF05336 Domain of unknown function (DUF718) 263 366 5.5E-28 T 23-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 CFF04554_RS05280 f0c6e4edbf41704b29674d98bcdc10cb 367 PANTHER PTHR34389 256 366 1.3E-25 T 23-04-2016 CFF04554_RS05280 f0c6e4edbf41704b29674d98bcdc10cb 367 SUPERFAMILY SSF51556 3 62 1.62E-22 T 23-04-2016 IPR032466 Metal-dependent hydrolase CFF04554_RS05280 f0c6e4edbf41704b29674d98bcdc10cb 367 SUPERFAMILY SSF51556 95 258 1.62E-22 T 23-04-2016 IPR032466 Metal-dependent hydrolase CFF04554_RS05085 a4056e5e9e2341ed4552a12a3d9e0daa 435 Pfam PF02646 RmuC family 133 420 5.5E-80 T 23-04-2016 IPR003798 DNA recombination RmuC CFF04554_RS05085 a4056e5e9e2341ed4552a12a3d9e0daa 435 PANTHER PTHR30563 1 435 8.4E-54 T 23-04-2016 CFF04554_RS02675 243e85b78fcfba2268bf7af940bd60c7 458 PANTHER PTHR11616 2 455 3.1E-148 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS02675 243e85b78fcfba2268bf7af940bd60c7 458 Pfam PF00209 Sodium:neurotransmitter symporter family 4 142 2.0E-26 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS02675 243e85b78fcfba2268bf7af940bd60c7 458 Pfam PF00209 Sodium:neurotransmitter symporter family 152 452 1.1E-34 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS02675 243e85b78fcfba2268bf7af940bd60c7 458 PANTHER PTHR11616:SF167 2 455 3.1E-148 T 23-04-2016 CFF04554_RS02675 243e85b78fcfba2268bf7af940bd60c7 458 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 259 279 9.0E-15 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS02675 243e85b78fcfba2268bf7af940bd60c7 458 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 9.0E-15 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS02675 243e85b78fcfba2268bf7af940bd60c7 458 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 9.0E-15 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS02675 243e85b78fcfba2268bf7af940bd60c7 458 SUPERFAMILY SSF161070 4 454 3.14E-125 T 23-04-2016 CFF04554_RS02675 243e85b78fcfba2268bf7af940bd60c7 458 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 28 42 - T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS04935 485831af8d57a9e3fac70ce03f018bc9 87 Gene3D G3DSA:1.10.287.950 34 73 9.0E-10 T 23-04-2016 CFF04554_RS04935 485831af8d57a9e3fac70ce03f018bc9 87 SUPERFAMILY SSF58104 29 73 1.07E-10 T 23-04-2016 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 PIRSF PIRSF036480 1 276 9.0E-106 T 23-04-2016 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 Pfam PF00551 Formyl transferase 83 257 9.5E-43 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 276 41.064 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 SUPERFAMILY SSF53328 83 276 1.57E-56 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 Gene3D G3DSA:3.30.70.260 2 50 2.7E-7 T 23-04-2016 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 PANTHER PTHR10520 1 270 2.2E-113 T 23-04-2016 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 PANTHER PTHR10520:SF7 1 270 2.2E-113 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 Gene3D G3DSA:3.40.50.170 83 275 1.6E-53 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 4 276 3.4E-109 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 104 131 2.0E-55 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 5 31 2.0E-55 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 82 104 2.0E-55 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 250 275 2.0E-55 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 37 49 2.0E-55 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 228 250 2.0E-55 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CFF04554_RS04125 3a7b92482600bb301ada9af2c58c5e9f 276 SUPERFAMILY SSF55021 3 62 1.42E-5 T 23-04-2016 CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 PANTHER PTHR11709:SF2 84 517 2.0E-81 T 23-04-2016 CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 ProSitePatterns PS00080 Multicopper oxidases signature 2. 498 509 - T 23-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 SUPERFAMILY SSF49503 405 515 1.5E-29 T 23-04-2016 IPR008972 Cupredoxin CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 SUPERFAMILY SSF49503 217 325 2.53E-18 T 23-04-2016 IPR008972 Cupredoxin CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 Pfam PF07731 Multicopper oxidase 398 516 1.5E-27 T 23-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 Pfam PF00394 Multicopper oxidase 238 326 2.4E-6 T 23-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 Gene3D G3DSA:2.60.40.420 386 517 1.2E-32 T 23-04-2016 IPR008972 Cupredoxin CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 PANTHER PTHR11709 84 517 2.0E-81 T 23-04-2016 CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 Gene3D G3DSA:2.60.40.420 216 326 2.6E-21 T 23-04-2016 IPR008972 Cupredoxin CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 Gene3D G3DSA:2.60.40.420 76 210 2.6E-32 T 23-04-2016 IPR008972 Cupredoxin CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 Pfam PF07732 Multicopper oxidase 92 208 4.3E-32 T 23-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 CFF04554_RS06680 41f5ce6cfed1aacfc811602dc6615d55 522 SUPERFAMILY SSF49503 76 208 2.75E-32 T 23-04-2016 IPR008972 Cupredoxin CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 282 3.2E-54 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 SUPERFAMILY SSF51735 101 283 7.59E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 Gene3D G3DSA:3.30.1330.90 320 446 2.0E-37 T 23-04-2016 IPR029009 Allosteric substrate binding domain CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 PANTHER PTHR10996:SF20 1 358 1.0E-132 T 23-04-2016 CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 314 7.9E-30 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 SUPERFAMILY SSF143548 321 448 3.66E-30 T 23-04-2016 IPR029009 Allosteric substrate binding domain CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 PANTHER PTHR10996 1 358 1.0E-132 T 23-04-2016 CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 4 522 1.4E-178 T 23-04-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 Gene3D G3DSA:3.40.50.720 107 283 1.7E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 Gene3D G3DSA:3.30.70.260 447 521 3.0E-19 T 23-04-2016 CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 145 172 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 SUPERFAMILY SSF52283 23 120 6.05E-30 T 23-04-2016 CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 Gene3D G3DSA:3.40.50.720 2 106 4.2E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 Pfam PF01842 ACT domain 454 515 1.9E-8 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CFF04554_RS06425 6ccc345ab32a711effefa774b69b972c 525 SUPERFAMILY SSF55021 442 520 1.41E-14 T 23-04-2016 CFF04554_RS04885 9f8babe64cf415aacf18ea18af2e59da 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 372 1.2E-150 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS04885 9f8babe64cf415aacf18ea18af2e59da 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 372 1.6E-143 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS04885 9f8babe64cf415aacf18ea18af2e59da 374 SUPERFAMILY SSF51713 1 370 1.83E-141 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS04885 9f8babe64cf415aacf18ea18af2e59da 374 PANTHER PTHR21148 1 371 6.2E-146 T 23-04-2016 CFF04554_RS04885 9f8babe64cf415aacf18ea18af2e59da 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 52.26 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS04885 9f8babe64cf415aacf18ea18af2e59da 374 Gene3D G3DSA:3.20.20.105 1 371 1.0E-145 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS04885 9f8babe64cf415aacf18ea18af2e59da 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 367 2.5E-82 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS04885 9f8babe64cf415aacf18ea18af2e59da 374 PANTHER PTHR21148:SF26 1 371 6.2E-146 T 23-04-2016 CFF04554_RS08475 07c6cc4d0388bc1e627f962686ce824e 145 TIGRFAM TIGR04423 casT3_TIGR04423: CRISPR type III-associated protein, TIGR04423 family 18 140 3.3E-20 T 23-04-2016 IPR030955 CRISPR type III-associated protein, CHP04423 family CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 Pfam PF00800 Prephenate dehydratase 89 265 6.4E-59 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 SUPERFAMILY SSF48600 3 89 2.44E-21 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 SMART SM00830 8 87 7.2E-25 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 Gene3D G3DSA:3.30.70.260 271 354 9.7E-28 T 23-04-2016 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 SUPERFAMILY SSF53850 88 267 1.3E-52 T 23-04-2016 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 Gene3D G3DSA:3.40.190.10 174 253 1.7E-23 T 23-04-2016 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 Pfam PF01817 Chorismate mutase type II 8 84 1.4E-23 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 TIGRFAM TIGR01807 CM_P2: chorismate mutase 5 77 1.1E-25 T 23-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 PIRSF PIRSF001500 1 357 7.2E-125 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 PANTHER PTHR21022 2 353 1.7E-101 T 23-04-2016 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 SUPERFAMILY SSF55021 260 353 9.51E-22 T 23-04-2016 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 Gene3D G3DSA:3.40.190.10 85 173 3.6E-29 T 23-04-2016 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 PANTHER PTHR21022:SF0 2 353 1.7E-101 T 23-04-2016 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 Gene3D G3DSA:1.20.59.10 1 84 1.2E-22 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CFF04554_RS01340 e7c451bc4859bff35d43bc0481648d86 358 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 303 310 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PRINTS PR01181 Diaminopimelate decarboxylase signature 288 306 1.5E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PRINTS PR01181 Diaminopimelate decarboxylase signature 149 158 1.5E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PRINTS PR01181 Diaminopimelate decarboxylase signature 60 77 1.5E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PRINTS PR01181 Diaminopimelate decarboxylase signature 367 389 1.5E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PANTHER PTHR11482:SF5 1 403 1.0E-154 T 23-04-2016 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 Gene3D G3DSA:3.20.20.10 20 252 5.8E-79 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 2 399 1.4E-156 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 255 274 1.0E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 1.0E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 42 60 1.0E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 62 74 1.0E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 370 1.0E-26 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 271 376 4.5E-20 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 42 60 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 PANTHER PTHR11482 1 403 1.0E-154 T 23-04-2016 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 21 265 6.3E-61 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 Gene3D G3DSA:2.40.37.10 253 400 7.1E-51 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 SUPERFAMILY SSF50621 242 399 1.97E-54 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 SUPERFAMILY SSF51419 11 267 4.22E-78 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 2 400 41.593 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS01350 a889b20a34e71dc7c1f26e39804aca97 403 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 211 226 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 SUPERFAMILY SSF161070 6 451 2.22E-105 T 23-04-2016 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 294 313 3.2E-11 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 430 450 3.2E-11 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 9 30 3.2E-11 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 246 266 3.2E-11 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 PANTHER PTHR11616 375 444 6.9E-107 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 PANTHER PTHR11616 6 355 6.9E-107 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 PANTHER PTHR11616:SF167 375 444 6.9E-107 T 23-04-2016 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 PANTHER PTHR11616:SF167 6 355 6.9E-107 T 23-04-2016 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 Pfam PF00209 Sodium:neurotransmitter symporter family 6 121 1.0E-21 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS06640 6b2361463244d5c9660784d6f504bee5 454 Pfam PF00209 Sodium:neurotransmitter symporter family 136 450 1.3E-20 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CFF04554_RS07270 6a420dbac17feb981cb867c9f04ed850 222 ProSitePatterns PS00171 Triosephosphate isomerase active site. 148 158 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CFF04554_RS07270 6a420dbac17feb981cb867c9f04ed850 222 SUPERFAMILY SSF51351 2 221 6.54E-59 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CFF04554_RS07270 6a420dbac17feb981cb867c9f04ed850 222 PANTHER PTHR21139 4 222 3.2E-45 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CFF04554_RS07270 6a420dbac17feb981cb867c9f04ed850 222 Gene3D G3DSA:3.20.20.70 2 221 1.4E-57 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS07270 6a420dbac17feb981cb867c9f04ed850 222 PANTHER PTHR21139:SF2 4 222 3.2E-45 T 23-04-2016 CFF04554_RS07270 6a420dbac17feb981cb867c9f04ed850 222 Pfam PF00121 Triosephosphate isomerase 2 220 9.7E-53 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 Gene3D G3DSA:3.30.479.20 293 335 1.3E-23 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 Gene3D G3DSA:3.30.479.20 153 196 1.3E-23 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 SUPERFAMILY SSF46934 1 55 8.08E-20 T 23-04-2016 IPR009060 UBA-like GO:0005515 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 Gene3D G3DSA:1.10.8.10 1 54 2.9E-28 T 23-04-2016 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 SUPERFAMILY SSF54713 302 334 5.89E-14 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 SUPERFAMILY SSF54713 148 198 5.89E-14 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 Gene3D G3DSA:3.30.479.20 56 147 5.0E-15 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 Gene3D G3DSA:1.10.286.20 246 286 8.3E-6 T 23-04-2016 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 Pfam PF00889 Elongation factor TS 72 336 8.0E-67 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 PANTHER PTHR11741 259 354 3.8E-106 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 PANTHER PTHR11741 1 216 3.8E-106 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 SUPERFAMILY SSF54713 238 353 1.14E-25 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 353 8.7E-101 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 SUPERFAMILY SSF54713 55 145 4.06E-18 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CFF04554_RS07340 b35a0e23d9b0250fa4e2eccab9876fba 354 Hamap MF_00050 Elongation factor Ts [tsf]. 1 354 61.818 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CFF04554_RS00645 811142cb8a83cf9cec5bcb48fe673d7f 491 Pfam PF00361 Proton-conducting membrane transporter 125 419 5.5E-51 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CFF04554_RS00645 811142cb8a83cf9cec5bcb48fe673d7f 491 PANTHER PTHR22773 1 488 1.0E-109 T 23-04-2016 CFF04554_RS00645 811142cb8a83cf9cec5bcb48fe673d7f 491 PANTHER PTHR22773:SF56 1 488 1.0E-109 T 23-04-2016 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 PANTHER PTHR30478 2 356 1.1E-52 T 23-04-2016 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 Gene3D G3DSA:3.10.150.10 245 355 4.6E-13 T 23-04-2016 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 SUPERFAMILY SSF55979 1 119 1.74E-19 T 23-04-2016 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 355 5.9E-74 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 PIRSF PIRSF000804 1 356 1.9E-69 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 239 2.7E-19 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 SUPERFAMILY SSF55979 124 240 2.83E-21 T 23-04-2016 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 Gene3D G3DSA:3.10.150.10 1 121 1.5E-16 T 23-04-2016 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 Gene3D G3DSA:3.10.150.10 122 243 2.0E-25 T 23-04-2016 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 242 353 1.3E-8 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 SUPERFAMILY SSF55979 242 356 2.72E-15 T 23-04-2016 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 SMART SM00480 17 352 5.6E-61 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS00010 eb21eae35e666a88391768b7ae4542d1 356 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 7.2E-17 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS04745 ddffe15a6c89ce68a5ea92126211f8c1 225 SUPERFAMILY SSF69593 11 223 5.62E-36 T 23-04-2016 CFF04554_RS04745 ddffe15a6c89ce68a5ea92126211f8c1 225 Gene3D G3DSA:3.40.1130.10 65 214 1.9E-16 T 23-04-2016 CFF04554_RS04745 ddffe15a6c89ce68a5ea92126211f8c1 225 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 61 175 2.5E-32 T 23-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 CFF04554_RS04745 ddffe15a6c89ce68a5ea92126211f8c1 225 PANTHER PTHR10434 1 223 9.4E-35 T 23-04-2016 CFF04554_RS04745 ddffe15a6c89ce68a5ea92126211f8c1 225 SMART SM00563 64 178 4.1E-31 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CFF04554_RS04745 ddffe15a6c89ce68a5ea92126211f8c1 225 Pfam PF01553 Acyltransferase 62 175 3.6E-23 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 SMART SM00864 16 214 6.0E-100 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 PANTHER PTHR30314:SF3 7 354 4.7E-142 T 23-04-2016 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 SUPERFAMILY SSF55307 217 331 4.81E-36 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 374 34.516 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 340 3.1E-113 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 Pfam PF12327 FtsZ family, C-terminal domain 233 328 1.1E-20 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 PANTHER PTHR30314 7 354 4.7E-142 T 23-04-2016 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 ProSitePatterns PS01135 FtsZ protein signature 2. 106 127 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 PRINTS PR00423 Cell division protein FtsZ signature 223 244 6.2E-38 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 PRINTS PR00423 Cell division protein FtsZ signature 135 156 6.2E-38 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 PRINTS PR00423 Cell division protein FtsZ signature 107 127 6.2E-38 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 PRINTS PR00423 Cell division protein FtsZ signature 198 220 6.2E-38 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 Gene3D G3DSA:3.30.1330.20 226 333 2.2E-38 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 SMART SM00865 218 337 9.1E-46 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 Gene3D G3DSA:3.40.50.1440 15 225 9.0E-81 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 182 1.1E-41 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CFF04554_RS02835 328b9d690315bdf8f7ca3da81c0c0c79 384 SUPERFAMILY SSF52490 16 214 7.59E-60 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CFF04554_RS00405 5a0081b03b02423fa26096ef1e77debc 188 PANTHER PTHR34406 4 185 4.8E-46 T 23-04-2016 CFF04554_RS00405 5a0081b03b02423fa26096ef1e77debc 188 SMART SM00867 23 186 2.1E-55 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CFF04554_RS00405 5a0081b03b02423fa26096ef1e77debc 188 Gene3D G3DSA:2.40.128.110 23 187 4.8E-52 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CFF04554_RS00405 5a0081b03b02423fa26096ef1e77debc 188 SUPERFAMILY SSF101874 22 186 1.31E-46 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CFF04554_RS00405 5a0081b03b02423fa26096ef1e77debc 188 Pfam PF04264 YceI-like domain 24 185 6.4E-39 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CFF04554_RS00405 5a0081b03b02423fa26096ef1e77debc 188 PANTHER PTHR34406:SF1 4 185 4.8E-46 T 23-04-2016 CFF04554_RS08365 8738a153befca566adc9aec972788375 219 PANTHER PTHR24220 4 216 1.3E-75 T 23-04-2016 CFF04554_RS08365 8738a153befca566adc9aec972788375 219 SUPERFAMILY SSF52540 3 217 5.84E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08365 8738a153befca566adc9aec972788375 219 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS08365 8738a153befca566adc9aec972788375 219 SMART SM00382 27 212 3.9E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS08365 8738a153befca566adc9aec972788375 219 Pfam PF00005 ABC transporter 18 163 3.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS08365 8738a153befca566adc9aec972788375 219 Gene3D G3DSA:3.40.50.300 3 218 1.4E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06015 494708b68594f4af589fdac7b9213411 242 Pfam PF00005 ABC transporter 17 164 5.8E-38 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS06015 494708b68594f4af589fdac7b9213411 242 PANTHER PTHR24220:SF474 3 242 3.1E-141 T 23-04-2016 CFF04554_RS06015 494708b68594f4af589fdac7b9213411 242 SMART SM00382 26 213 4.3E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS06015 494708b68594f4af589fdac7b9213411 242 PANTHER PTHR24220 3 242 3.1E-141 T 23-04-2016 CFF04554_RS06015 494708b68594f4af589fdac7b9213411 242 PIRSF PIRSF039085 1 241 1.3E-101 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CFF04554_RS06015 494708b68594f4af589fdac7b9213411 242 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS06015 494708b68594f4af589fdac7b9213411 242 Gene3D G3DSA:3.40.50.300 2 236 2.4E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06015 494708b68594f4af589fdac7b9213411 242 SUPERFAMILY SSF52540 1 234 1.82E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00300 1e576d722e42296373490ca1a0c0fe43 118 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 116 4.5E-46 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00300 1e576d722e42296373490ca1a0c0fe43 118 SUPERFAMILY SSF64263 1 116 5.89E-46 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00300 1e576d722e42296373490ca1a0c0fe43 118 Gene3D G3DSA:3.90.1030.10 1 116 3.3E-46 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00300 1e576d722e42296373490ca1a0c0fe43 118 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.028 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00300 1e576d722e42296373490ca1a0c0fe43 118 PANTHER PTHR14413 1 116 2.5E-52 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00300 1e576d722e42296373490ca1a0c0fe43 118 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00300 1e576d722e42296373490ca1a0c0fe43 118 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-32 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 PANTHER PTHR11918:SF45 2 413 9.8E-80 T 23-04-2016 CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 SMART SM00729 131 344 1.0E-37 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 Pfam PF04055 Radical SAM superfamily 136 297 4.8E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 5 398 3.4E-123 T 23-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 SUPERFAMILY SSF102114 122 352 4.84E-45 T 23-04-2016 CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 135 155 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 Pfam PF00919 Uncharacterized protein family UPF0004 2 88 3.3E-20 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 PANTHER PTHR11918 2 413 9.8E-80 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 2 409 8.8E-102 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CFF04554_RS04295 01d182dfc98621620e12518ae6c03115 413 Gene3D G3DSA:3.80.30.20 129 352 6.3E-55 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS06455 09be2276e20c4b0b49ef06bf835de655 330 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 329 45.042 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CFF04554_RS06455 09be2276e20c4b0b49ef06bf835de655 330 Pfam PF01409 tRNA synthetases class II core domain (F) 85 329 2.4E-95 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CFF04554_RS06455 09be2276e20c4b0b49ef06bf835de655 330 Gene3D G3DSA:3.30.930.10 3 330 4.8E-114 T 23-04-2016 CFF04554_RS06455 09be2276e20c4b0b49ef06bf835de655 330 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 33 330 3.7E-97 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CFF04554_RS06455 09be2276e20c4b0b49ef06bf835de655 330 SUPERFAMILY SSF55681 86 330 9.22E-72 T 23-04-2016 CFF04554_RS06455 09be2276e20c4b0b49ef06bf835de655 330 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 13 79 2.0E-14 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CFF04554_RS06455 09be2276e20c4b0b49ef06bf835de655 330 PANTHER PTHR11538 85 330 5.2E-91 T 23-04-2016 CFF04554_RS06455 09be2276e20c4b0b49ef06bf835de655 330 SUPERFAMILY SSF46589 6 90 2.35E-14 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CFF04554_RS01150 740c06d15b28a439b81f84499741556e 238 Gene3D G3DSA:3.30.1330.60 102 209 1.5E-15 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS01150 740c06d15b28a439b81f84499741556e 238 Pfam PF00691 OmpA family 122 209 6.1E-10 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS01150 740c06d15b28a439b81f84499741556e 238 PANTHER PTHR30329 1 202 1.9E-17 T 23-04-2016 CFF04554_RS01150 740c06d15b28a439b81f84499741556e 238 SUPERFAMILY SSF103088 109 211 1.57E-15 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS01150 740c06d15b28a439b81f84499741556e 238 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 51 2.1E-15 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain CFF04554_RS01150 740c06d15b28a439b81f84499741556e 238 PANTHER PTHR30329:SF4 1 202 1.9E-17 T 23-04-2016 CFF04554_RS04260 d8ec33d195af3819b9bc760634db580c 244 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 171 243 1.1E-17 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CFF04554_RS04260 d8ec33d195af3819b9bc760634db580c 244 Gene3D G3DSA:3.30.1150.10 158 243 4.9E-13 T 23-04-2016 CFF04554_RS04260 d8ec33d195af3819b9bc760634db580c 244 SUPERFAMILY SSF74653 165 243 3.79E-13 T 23-04-2016 CFF04554_RS04260 d8ec33d195af3819b9bc760634db580c 244 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 169 243 1.1E-18 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 Gene3D G3DSA:1.10.8.60 136 197 2.7E-7 T 23-04-2016 CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 SUPERFAMILY SSF52540 2 195 1.45E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 SMART SM00382 33 146 3.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 Pfam PF16193 AAA C-terminal domain 163 234 1.0E-15 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 Gene3D G3DSA:1.20.272.10 218 314 2.1E-41 T 23-04-2016 CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 Pfam PF12002 MgsA AAA+ ATPase C terminal 235 389 4.1E-55 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 SUPERFAMILY SSF48019 220 391 1.47E-58 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 Gene3D G3DSA:1.10.3710.10 316 393 4.5E-17 T 23-04-2016 CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 Gene3D G3DSA:3.40.50.300 4 135 1.6E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 3 115 5.3E-17 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 PANTHER PTHR13779:SF7 8 396 9.6E-118 T 23-04-2016 CFF04554_RS08930 64963b522d6c0d95fd0caed4cce8f1af 397 PANTHER PTHR13779 8 396 9.6E-118 T 23-04-2016 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 72 99 1.6E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 152 172 1.6E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 201 230 1.6E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 107 128 1.6E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 236 252 1.6E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 253 271 1.6E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 31 53 1.6E-83 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 PANTHER PTHR10025 2 278 9.0E-153 T 23-04-2016 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 257 265 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 118 7.9E-38 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 121 279 2.5E-70 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 73 98 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 Gene3D G3DSA:3.40.192.10 5 137 2.5E-47 T 23-04-2016 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 280 38.563 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 SUPERFAMILY SSF51735 120 276 4.71E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 Gene3D G3DSA:3.40.50.720 138 261 7.3E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06060 3129677fee3ed0746de635f5b6fb0951 283 SUPERFAMILY SSF53223 2 119 2.78E-36 T 23-04-2016 CFF04554_RS02840 9c5fc3b7771b6beeb2fd913ab55d1d8d 646 Pfam PF00877 NlpC/P60 family 279 359 2.7E-12 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CFF04554_RS02840 9c5fc3b7771b6beeb2fd913ab55d1d8d 646 SUPERFAMILY SSF54001 265 359 1.37E-11 T 23-04-2016 CFF04554_RS02840 9c5fc3b7771b6beeb2fd913ab55d1d8d 646 Gene3D G3DSA:3.90.1720.10 267 360 1.3E-13 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CFF04554_RS02840 9c5fc3b7771b6beeb2fd913ab55d1d8d 646 Pfam PF12913 SH3 domain (SH3b1 type) 138 189 2.6E-22 T 23-04-2016 CFF04554_RS02840 9c5fc3b7771b6beeb2fd913ab55d1d8d 646 Pfam PF12914 SH3 domain of SH3b2 type 199 242 1.3E-11 T 23-04-2016 IPR026864 SH3b2-type SH3 domain CFF04554_RS02840 9c5fc3b7771b6beeb2fd913ab55d1d8d 646 SUPERFAMILY SSF55166 555 638 2.62E-20 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CFF04554_RS02840 9c5fc3b7771b6beeb2fd913ab55d1d8d 646 Pfam PF12912 NLPC_P60 stabilising domain, N term 53 114 2.5E-6 T 23-04-2016 IPR025606 NLPC/P60, N-terminal domain CFF04554_RS02840 9c5fc3b7771b6beeb2fd913ab55d1d8d 646 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 572 634 1.5E-19 T 23-04-2016 CFF04554_RS07965 0eb9d0e91eeed88684d25f54353b7736 420 Pfam PF13183 4Fe-4S dicluster domain 11 77 1.6E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS07965 0eb9d0e91eeed88684d25f54353b7736 420 PANTHER PTHR32479 5 410 1.4E-56 T 23-04-2016 CFF04554_RS07965 0eb9d0e91eeed88684d25f54353b7736 420 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS07965 0eb9d0e91eeed88684d25f54353b7736 420 SUPERFAMILY SSF46548 10 92 2.27E-14 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CFF04554_RS07965 0eb9d0e91eeed88684d25f54353b7736 420 Gene3D G3DSA:1.10.1060.10 11 97 5.3E-15 T 23-04-2016 CFF04554_RS07965 0eb9d0e91eeed88684d25f54353b7736 420 PANTHER PTHR32479:SF13 5 410 1.4E-56 T 23-04-2016 CFF04554_RS07965 0eb9d0e91eeed88684d25f54353b7736 420 Pfam PF02754 Cysteine-rich domain 175 260 4.0E-13 T 23-04-2016 IPR004017 Cysteine-rich domain CFF04554_RS07965 0eb9d0e91eeed88684d25f54353b7736 420 Pfam PF02754 Cysteine-rich domain 313 396 9.3E-12 T 23-04-2016 IPR004017 Cysteine-rich domain CFF04554_RS07965 0eb9d0e91eeed88684d25f54353b7736 420 PIRSF PIRSF000139 1 420 7.9E-112 T 23-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 321 3.2E-123 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 PANTHER PTHR10836 1 330 2.7E-157 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 Gene3D G3DSA:3.30.360.10 158 312 8.2E-67 T 23-04-2016 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 PIRSF PIRSF000149 1 330 7.3E-123 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 PANTHER PTHR10836:SF50 1 330 2.7E-157 T 23-04-2016 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 SUPERFAMILY SSF55347 149 311 2.14E-63 T 23-04-2016 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 Gene3D G3DSA:3.40.50.720 1 157 1.5E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 149 8.1E-51 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 143 161 1.3E-34 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 226 243 1.3E-34 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.3E-34 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 170 186 1.3E-34 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 1.3E-34 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 SMART SM00846 3 149 1.1E-72 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 154 310 2.1E-58 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 SUPERFAMILY SSF51735 1 169 8.94E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07280 46a96c332d1588076de6a3835d4205eb 330 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 147 154 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 CFF04554_RS07800 60f3e85ee46bef2755babb37b9c3add5 211 PANTHER PTHR12835 1 139 1.7E-21 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CFF04554_RS07800 60f3e85ee46bef2755babb37b9c3add5 211 SUPERFAMILY SSF55681 3 134 5.61E-33 T 23-04-2016 CFF04554_RS07800 60f3e85ee46bef2755babb37b9c3add5 211 Gene3D G3DSA:3.30.930.10 4 168 8.3E-33 T 23-04-2016 CFF04554_RS07800 60f3e85ee46bef2755babb37b9c3add5 211 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 3 178 5.4E-31 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CFF04554_RS07800 60f3e85ee46bef2755babb37b9c3add5 211 Pfam PF03099 Biotin/lipoate A/B protein ligase family 28 129 2.5E-13 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 PANTHER PTHR10277:SF9 2 506 4.5E-230 T 23-04-2016 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 504 40.851 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 500 1.3E-25 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 SUPERFAMILY SSF110921 395 499 5.89E-17 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 Gene3D G3DSA:3.20.20.70 2 346 1.1E-141 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 Pfam PF00682 HMGL-like 5 273 5.9E-96 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 498 7.1E-204 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 PANTHER PTHR10277 2 506 4.5E-230 T 23-04-2016 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 23-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 SUPERFAMILY SSF51569 3 291 5.37E-94 T 23-04-2016 CFF04554_RS06865 d26d856ca3363c5ca99884dbf10cdd7f 506 SMART SM00917 369 501 2.4E-29 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CFF04554_RS04750 45474cad46d0dddb31e3faa56d5bc2d7 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 124 19.042 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CFF04554_RS04750 45474cad46d0dddb31e3faa56d5bc2d7 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 119 2.9E-22 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CFF04554_RS04750 45474cad46d0dddb31e3faa56d5bc2d7 128 PANTHER PTHR28259 1 124 4.9E-31 T 23-04-2016 CFF04554_RS04750 45474cad46d0dddb31e3faa56d5bc2d7 128 TIGRFAM TIGR00494 crcB: protein CrcB 9 122 2.0E-29 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CFF04554_RS02310 15500c240d766f500077908e9df49c5c 380 Pfam PF07277 SapC 182 370 2.9E-41 T 23-04-2016 IPR010836 SapC CFF04554_RS08250 7df6f7787861ede684d46f30784b34e8 247 Gene3D G3DSA:3.90.550.10 1 242 8.8E-37 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS08250 7df6f7787861ede684d46f30784b34e8 247 PANTHER PTHR22572 2 114 3.1E-25 T 23-04-2016 CFF04554_RS08250 7df6f7787861ede684d46f30784b34e8 247 Pfam PF00483 Nucleotidyl transferase 2 121 3.7E-11 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CFF04554_RS08250 7df6f7787861ede684d46f30784b34e8 247 SUPERFAMILY SSF53448 1 243 2.25E-37 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS08555 d270508402b5d690953129f9dd5286ef 434 PANTHER PTHR15184 1 430 1.4E-175 T 23-04-2016 CFF04554_RS08555 d270508402b5d690953129f9dd5286ef 434 SUPERFAMILY SSF52540 91 360 4.05E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08555 d270508402b5d690953129f9dd5286ef 434 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS08555 d270508402b5d690953129f9dd5286ef 434 SMART SM00382 157 338 8.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS08555 d270508402b5d690953129f9dd5286ef 434 PANTHER PTHR15184:SF9 1 430 1.4E-175 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS08555 d270508402b5d690953129f9dd5286ef 434 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 354 1.8E-69 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS08555 d270508402b5d690953129f9dd5286ef 434 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 8 433 4.2E-172 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS08555 d270508402b5d690953129f9dd5286ef 434 Gene3D G3DSA:3.40.50.300 91 356 9.2E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01275 58e97b9f550ddea16b67d4030acdfffd 238 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 7 234 1.3E-67 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CFF04554_RS01275 58e97b9f550ddea16b67d4030acdfffd 238 Pfam PF01209 ubiE/COQ5 methyltransferase family 3 232 8.5E-42 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CFF04554_RS01275 58e97b9f550ddea16b67d4030acdfffd 238 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 18 33 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CFF04554_RS01275 58e97b9f550ddea16b67d4030acdfffd 238 SUPERFAMILY SSF53335 5 233 2.63E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS01275 58e97b9f550ddea16b67d4030acdfffd 238 Gene3D G3DSA:3.40.50.150 2 228 2.0E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS01275 58e97b9f550ddea16b67d4030acdfffd 238 PANTHER PTHR10108:SF24 2 215 8.4E-38 T 23-04-2016 CFF04554_RS01275 58e97b9f550ddea16b67d4030acdfffd 238 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 234 29.518 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CFF04554_RS01275 58e97b9f550ddea16b67d4030acdfffd 238 PANTHER PTHR10108 2 215 8.4E-38 T 23-04-2016 CFF04554_RS03850 6cd5ae95fab500213e590665c22ca96b 539 Pfam PF00999 Sodium/hydrogen exchanger family 9 371 1.3E-62 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CFF04554_RS03850 6cd5ae95fab500213e590665c22ca96b 539 PANTHER PTHR16254 7 495 1.3E-124 T 23-04-2016 CFF04554_RS03850 6cd5ae95fab500213e590665c22ca96b 539 Pfam PF02254 TrkA-N domain 402 508 1.2E-15 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CFF04554_RS03850 6cd5ae95fab500213e590665c22ca96b 539 Gene3D G3DSA:3.40.50.720 395 531 1.2E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03850 6cd5ae95fab500213e590665c22ca96b 539 SUPERFAMILY SSF51735 398 532 1.97E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03850 6cd5ae95fab500213e590665c22ca96b 539 PANTHER PTHR16254:SF6 7 495 1.3E-124 T 23-04-2016 CFF04554_RS09180 ab0a258c0d82ca5d1d43797ae162f3e1 227 Gene3D G3DSA:1.10.3210.10 105 212 6.7E-39 T 23-04-2016 IPR006674 HD domain CFF04554_RS09180 ab0a258c0d82ca5d1d43797ae162f3e1 227 SUPERFAMILY SSF109604 106 217 7.69E-25 T 23-04-2016 CFF04554_RS09180 ab0a258c0d82ca5d1d43797ae162f3e1 227 Pfam PF13023 HD domain 119 226 2.7E-30 T 23-04-2016 IPR006674 HD domain CFF04554_RS03455 720dce2738312384b691d63669f98405 294 SUPERFAMILY SSF48576 7 281 4.8E-71 T 23-04-2016 IPR008949 Isoprenoid synthase domain CFF04554_RS03455 720dce2738312384b691d63669f98405 294 Gene3D G3DSA:1.10.600.10 1 293 8.2E-83 T 23-04-2016 IPR008949 Isoprenoid synthase domain CFF04554_RS03455 720dce2738312384b691d63669f98405 294 Pfam PF00348 Polyprenyl synthetase 28 244 2.3E-60 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CFF04554_RS03455 720dce2738312384b691d63669f98405 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 181 193 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CFF04554_RS03455 720dce2738312384b691d63669f98405 294 PANTHER PTHR12001 1 294 1.3E-65 T 23-04-2016 IPR017446 Polyprenyl synthetase-related CFF04554_RS03455 720dce2738312384b691d63669f98405 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 63 77 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 PANTHER PTHR11265:SF0 5 306 1.2E-92 T 23-04-2016 CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 SUPERFAMILY SSF81799 110 207 6.15E-25 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 SUPERFAMILY SSF53335 207 301 1.62E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 SUPERFAMILY SSF53335 4 109 1.62E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 304 30.583 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 PANTHER PTHR11265 5 306 1.2E-92 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 Gene3D G3DSA:3.40.50.150 5 106 1.8E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 Gene3D G3DSA:3.40.50.150 210 301 1.8E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 Gene3D G3DSA:1.10.150.170 109 209 5.3E-27 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 302 1.8E-88 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 Pfam PF01795 MraW methylase family 3 302 1.1E-90 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS02815 1e9cc2ba05488e9184084b431fdbbd01 307 PIRSF PIRSF004486 1 305 7.5E-90 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS00150 7bf0659b9ca1c8aea475fa55db594e61 209 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 22 208 6.7E-52 T 23-04-2016 CFF04554_RS00150 7bf0659b9ca1c8aea475fa55db594e61 209 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 12 208 9.9E-61 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CFF04554_RS00150 7bf0659b9ca1c8aea475fa55db594e61 209 SUPERFAMILY SSF53335 10 208 5.15E-34 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS00150 7bf0659b9ca1c8aea475fa55db594e61 209 Gene3D G3DSA:3.40.50.150 23 207 2.0E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS00150 7bf0659b9ca1c8aea475fa55db594e61 209 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 131 146 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CFF04554_RS00150 7bf0659b9ca1c8aea475fa55db594e61 209 PANTHER PTHR11579 23 209 1.4E-43 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CFF04554_RS02155 14124accd2755ab95b6ae40b90f74c9d 549 Gene3D G3DSA:1.10.287.130 329 383 1.4E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS02155 14124accd2755ab95b6ae40b90f74c9d 549 SUPERFAMILY SSF55874 394 544 1.72E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS02155 14124accd2755ab95b6ae40b90f74c9d 549 SMART SM00388 327 397 2.8E-4 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS02155 14124accd2755ab95b6ae40b90f74c9d 549 PANTHER PTHR24423 4 14 1.8E-18 T 23-04-2016 CFF04554_RS02155 14124accd2755ab95b6ae40b90f74c9d 549 PANTHER PTHR24423 325 546 1.8E-18 T 23-04-2016 CFF04554_RS02155 14124accd2755ab95b6ae40b90f74c9d 549 SUPERFAMILY SSF47384 324 396 1.26E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS02155 14124accd2755ab95b6ae40b90f74c9d 549 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 441 538 2.3E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS02155 14124accd2755ab95b6ae40b90f74c9d 549 Gene3D G3DSA:3.30.565.10 384 539 8.9E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS02155 14124accd2755ab95b6ae40b90f74c9d 549 Pfam PF02743 Cache domain 52 237 5.5E-12 T 23-04-2016 IPR033479 Double Cache domain 1 CFF04554_RS08295 5e6b6301542edb13c762e2ecf1ff39f4 442 Pfam PF02386 Cation transport protein 8 427 1.1E-59 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CFF04554_RS08295 5e6b6301542edb13c762e2ecf1ff39f4 442 PANTHER PTHR32024 7 442 2.9E-152 T 23-04-2016 CFF04554_RS08295 5e6b6301542edb13c762e2ecf1ff39f4 442 PANTHER PTHR32024:SF1 7 442 2.9E-152 T 23-04-2016 CFF04554_RS08295 5e6b6301542edb13c762e2ecf1ff39f4 442 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 24 414 8.6E-108 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 PANTHER PTHR10937 1 605 7.5E-236 T 23-04-2016 CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 Gene3D G3DSA:3.40.50.10490 248 444 3.6E-65 T 23-04-2016 CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 PANTHER PTHR10937:SF0 1 605 7.5E-236 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 Gene3D G3DSA:3.60.20.10 2 228 8.6E-65 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 Pfam PF01380 SIS domain 294 416 2.7E-28 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 Pfam PF01380 SIS domain 468 550 3.1E-9 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 Pfam PF13522 Glutamine amidotransferase domain 64 195 9.8E-22 T 23-04-2016 CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 SUPERFAMILY SSF56235 2 234 1.46E-61 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 605 2.3E-223 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 Gene3D G3DSA:3.40.50.10490 450 605 8.7E-46 T 23-04-2016 CFF04554_RS02905 ebe026de042314be731907f2b9026a0e 605 SUPERFAMILY SSF53697 249 605 3.9E-88 T 23-04-2016 CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Gene3D G3DSA:4.10.860.10 610 658 1.3E-16 T 23-04-2016 IPR001943 UVR domain GO:0005515 CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 SMART SM00490 462 548 1.5E-19 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 SUPERFAMILY SSF46600 612 657 6.02E-12 T 23-04-2016 IPR001943 UVR domain GO:0005515 CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 SUPERFAMILY SSF52540 35 81 1.92E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 SUPERFAMILY SSF52540 461 571 1.92E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 SMART SM00487 8 428 8.6E-25 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 658 40.789 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Pfam PF00271 Helicase conserved C-terminal domain 446 547 2.4E-18 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Pfam PF04851 Type III restriction enzyme, res subunit 9 118 2.7E-12 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 SUPERFAMILY SSF52540 1 417 1.18E-123 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Gene3D G3DSA:3.30.2060.10 160 231 4.9E-11 T 23-04-2016 CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 656 4.3E-292 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 PANTHER PTHR24029 1 658 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Pfam PF02151 UvrB/uvrC motif 624 657 2.1E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Pfam PF12344 Ultra-violet resistance protein B 554 595 5.6E-16 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Gene3D G3DSA:3.40.50.300 5 88 1.3E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Gene3D G3DSA:3.40.50.300 390 410 1.3E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Gene3D G3DSA:3.40.50.300 277 340 1.3E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04365 a625324779a9971e0f4ca86c29205c51 658 Gene3D G3DSA:3.40.50.300 421 582 8.0E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06050 6d19c1ded1028fa46fc569243607dc8e 214 Pfam PF02163 Peptidase family M50 130 186 7.1E-8 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 CFF04554_RS06050 6d19c1ded1028fa46fc569243607dc8e 214 PANTHER PTHR22939:SF104 36 201 8.0E-38 T 23-04-2016 CFF04554_RS06050 6d19c1ded1028fa46fc569243607dc8e 214 PANTHER PTHR22939 36 201 8.0E-38 T 23-04-2016 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PANTHER PTHR30381:SF0 1 349 8.3E-109 T 23-04-2016 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 Hamap MF_00416 Flagellar P-ring protein [flgI]. 6 349 34.237 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PANTHER PTHR30381 1 349 8.3E-109 T 23-04-2016 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PRINTS PR01010 Flagellar P-ring protein signature 119 137 1.6E-75 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PRINTS PR01010 Flagellar P-ring protein signature 55 70 1.6E-75 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PRINTS PR01010 Flagellar P-ring protein signature 80 99 1.6E-75 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PRINTS PR01010 Flagellar P-ring protein signature 21 36 1.6E-75 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PRINTS PR01010 Flagellar P-ring protein signature 153 171 1.6E-75 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PRINTS PR01010 Flagellar P-ring protein signature 102 119 1.6E-75 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PRINTS PR01010 Flagellar P-ring protein signature 241 253 1.6E-75 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PRINTS PR01010 Flagellar P-ring protein signature 36 51 1.6E-75 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 PRINTS PR01010 Flagellar P-ring protein signature 179 197 1.6E-75 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS00480 8ee3fe39207f62afde14fe5cffffd1cb 349 Pfam PF02119 Flagellar P-ring protein 21 348 2.1E-114 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CFF04554_RS02325 2fd187111aef91bc2271aa4a840734cb 1108 Gene3D G3DSA:3.80.10.10 625 652 1.0E-6 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CFF04554_RS02325 2fd187111aef91bc2271aa4a840734cb 1108 Gene3D G3DSA:3.80.10.10 257 303 1.0E-6 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CFF04554_RS02325 2fd187111aef91bc2271aa4a840734cb 1108 Gene3D G3DSA:3.80.10.10 534 535 1.0E-6 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CFF04554_RS02325 2fd187111aef91bc2271aa4a840734cb 1108 Gene3D G3DSA:3.80.10.10 833 906 1.0E-6 T 23-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like CFF04554_RS02325 2fd187111aef91bc2271aa4a840734cb 1108 PRINTS PR00313 NodO calcium binding signature 959 968 9.2E-8 T 23-04-2016 CFF04554_RS02325 2fd187111aef91bc2271aa4a840734cb 1108 PRINTS PR00313 NodO calcium binding signature 419 427 9.2E-8 T 23-04-2016 CFF04554_RS02325 2fd187111aef91bc2271aa4a840734cb 1108 PRINTS PR00313 NodO calcium binding signature 439 447 9.2E-8 T 23-04-2016 CFF04554_RS02325 2fd187111aef91bc2271aa4a840734cb 1108 PRINTS PR00313 NodO calcium binding signature 231 242 9.2E-8 T 23-04-2016 CFF04554_RS02630 c44a3d87e0fa4df3cab4f733fa2805d5 291 PANTHER PTHR11562:SF55 12 288 9.7E-72 T 23-04-2016 CFF04554_RS02630 c44a3d87e0fa4df3cab4f733fa2805d5 291 PANTHER PTHR11562 12 288 9.7E-72 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CFF04554_RS02630 c44a3d87e0fa4df3cab4f733fa2805d5 291 Pfam PF16916 Dimerisation domain of Zinc Transporter 204 281 1.1E-18 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CFF04554_RS02630 c44a3d87e0fa4df3cab4f733fa2805d5 291 Gene3D G3DSA:3.30.70.1350 202 272 2.7E-16 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain CFF04554_RS02630 c44a3d87e0fa4df3cab4f733fa2805d5 291 SUPERFAMILY SSF160240 203 274 1.24E-14 T 23-04-2016 CFF04554_RS02630 c44a3d87e0fa4df3cab4f733fa2805d5 291 Pfam PF01545 Cation efflux family 9 200 3.1E-44 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CFF04554_RS02630 c44a3d87e0fa4df3cab4f733fa2805d5 291 SUPERFAMILY SSF161111 11 201 7.06E-51 T 23-04-2016 CFF04554_RS02630 c44a3d87e0fa4df3cab4f733fa2805d5 291 Gene3D G3DSA:1.20.1510.10 9 200 5.5E-44 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CFF04554_RS02630 c44a3d87e0fa4df3cab4f733fa2805d5 291 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 271 6.0E-71 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 322 762 7.7E-173 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 Pfam PF02811 PHP domain 6 184 2.0E-49 T 23-04-2016 IPR004013 PHP domain GO:0003824 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 SUPERFAMILY SSF89550 5 273 9.02E-33 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 SMART SM00481 5 72 4.6E-30 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 Gene3D G3DSA:1.10.150.280 866 897 2.1E-4 T 23-04-2016 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 Pfam PF14579 Helix-hairpin-helix motif 836 926 2.0E-23 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 1059 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 PANTHER PTHR32294:SF0 1 298 0.0 T 23-04-2016 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 PANTHER PTHR32294:SF0 316 1103 0.0 T 23-04-2016 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 Gene3D G3DSA:3.20.20.140 4 266 3.9E-41 T 23-04-2016 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 PANTHER PTHR32294 1 298 0.0 T 23-04-2016 CFF04554_RS06385 fedd58c0c59e66daef26dffcadd955c5 1331 PANTHER PTHR32294 316 1103 0.0 T 23-04-2016 CFF04554_RS07560 924f1a1c15fd225735db671d09837aa1 175 PANTHER PTHR31223:SF1 4 175 6.1E-63 T 23-04-2016 CFF04554_RS07560 924f1a1c15fd225735db671d09837aa1 175 Gene3D G3DSA:3.40.50.450 3 174 1.7E-55 T 23-04-2016 CFF04554_RS07560 924f1a1c15fd225735db671d09837aa1 175 SUPERFAMILY SSF102405 3 174 8.85E-50 T 23-04-2016 CFF04554_RS07560 924f1a1c15fd225735db671d09837aa1 175 Pfam PF03641 Possible lysine decarboxylase 45 172 9.4E-29 T 23-04-2016 IPR031100 LOG family CFF04554_RS07560 924f1a1c15fd225735db671d09837aa1 175 PANTHER PTHR31223 4 175 6.1E-63 T 23-04-2016 CFF04554_RS07560 924f1a1c15fd225735db671d09837aa1 175 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 4 172 3.2E-42 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CFF04554_RS00105 062787461da75c1ec8b4254a417df5f8 454 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 167 434 1.8E-58 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 CFF04554_RS00105 062787461da75c1ec8b4254a417df5f8 454 Gene3D G3DSA:3.20.140.10 126 378 7.9E-10 T 23-04-2016 CFF04554_RS00105 062787461da75c1ec8b4254a417df5f8 454 PANTHER PTHR11098 1 451 1.7E-185 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 CFF04554_RS00105 062787461da75c1ec8b4254a417df5f8 454 PANTHER PTHR11098:SF2 1 451 1.7E-185 T 23-04-2016 CFF04554_RS00105 062787461da75c1ec8b4254a417df5f8 454 PIRSF PIRSF005943 1 454 5.5E-166 T 23-04-2016 IPR016471 Nicotinamide phosphoribosyl transferase CFF04554_RS00105 062787461da75c1ec8b4254a417df5f8 454 SUPERFAMILY SSF51690 166 451 1.3E-45 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 Gene3D G3DSA:3.30.1270.10 209 235 7.4E-30 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 Gene3D G3DSA:3.30.1270.10 80 133 7.4E-30 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 Gene3D G3DSA:1.10.10.200 1 77 8.1E-29 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 Gene3D G3DSA:3.30.70.980 134 200 1.6E-25 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 PANTHER PTHR12532 1 235 6.2E-75 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 1.1E-79 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 235 27.46 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 PANTHER PTHR12532:SF0 1 235 6.2E-75 T 23-04-2016 CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 SUPERFAMILY SSF75625 1 235 2.35E-77 T 23-04-2016 IPR029072 YebC-like CFF04554_RS02125 3c08fda7fade4bded60317cc7ce38235 235 Pfam PF01709 Transcriptional regulator 5 234 7.2E-77 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like CFF04554_RS07930 8627da2edc7debce84bfe18983794ca8 143 SUPERFAMILY SSF46785 5 131 1.39E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS07930 8627da2edc7debce84bfe18983794ca8 143 Pfam PF12802 MarR family 33 82 2.1E-10 T 23-04-2016 CFF04554_RS07930 8627da2edc7debce84bfe18983794ca8 143 Gene3D G3DSA:1.10.10.10 7 139 7.8E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS07930 8627da2edc7debce84bfe18983794ca8 143 SMART SM00347 26 123 1.2E-10 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 553 3.5E-105 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 558 34.965 T 23-04-2016 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 SUPERFAMILY SSF55681 120 312 1.1E-100 T 23-04-2016 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 SUPERFAMILY SSF55681 406 553 1.1E-100 T 23-04-2016 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 Gene3D G3DSA:2.40.50.140 1 107 1.3E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 577 3.0E-239 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 Pfam PF02938 GAD domain 313 405 1.4E-23 T 23-04-2016 IPR029351 GAD domain CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 Gene3D G3DSA:3.30.1360.30 279 413 1.0E-41 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 SUPERFAMILY SSF50249 1 106 8.76E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 PANTHER PTHR22594:SF5 369 566 1.7E-240 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 PANTHER PTHR22594:SF5 1 298 1.7E-240 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 2.2E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 2.2E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 2.2E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 2.2E-26 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 Gene3D G3DSA:3.30.930.10 135 278 1.4E-111 T 23-04-2016 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 Gene3D G3DSA:3.30.930.10 414 579 1.4E-111 T 23-04-2016 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 SUPERFAMILY SSF55261 290 419 3.27E-35 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 3.2E-17 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 PANTHER PTHR22594 369 566 1.7E-240 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06170 621e5d3c26f8db2b30ff50b7fa24c3b6 584 PANTHER PTHR22594 1 298 1.7E-240 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS08235 5828fb21fbe8b931f83fb128607418ee 258 PANTHER PTHR10108 1 171 2.0E-19 T 23-04-2016 CFF04554_RS08235 5828fb21fbe8b931f83fb128607418ee 258 Gene3D G3DSA:3.40.50.150 45 252 6.2E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08235 5828fb21fbe8b931f83fb128607418ee 258 Pfam PF08241 Methyltransferase domain 51 138 2.5E-12 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CFF04554_RS08235 5828fb21fbe8b931f83fb128607418ee 258 SUPERFAMILY SSF53335 11 246 2.11E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 Pfam PF00700 Bacterial flagellin C-terminal helical region 865 947 1.9E-7 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 Gene3D G3DSA:1.20.1330.10 54 172 1.3E-17 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 Gene3D G3DSA:1.20.1330.10 852 904 1.3E-17 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 138 2.0E-14 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 PANTHER PTHR30244 1 187 1.7E-21 T 23-04-2016 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 PANTHER PTHR30244 814 947 1.7E-21 T 23-04-2016 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 SUPERFAMILY SSF64518 530 677 3.14E-18 T 23-04-2016 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 SUPERFAMILY SSF64518 762 947 3.14E-18 T 23-04-2016 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 SUPERFAMILY SSF64518 1 219 5.36E-31 T 23-04-2016 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 SUPERFAMILY SSF64518 250 300 5.36E-31 T 23-04-2016 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 SUPERFAMILY SSF64518 328 426 5.36E-31 T 23-04-2016 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 PANTHER PTHR30244:SF5 1 187 1.7E-21 T 23-04-2016 CFF04554_RS03435 2b9da001c3eb69b7879befa61e61393e 947 PANTHER PTHR30244:SF5 814 947 1.7E-21 T 23-04-2016 CFF04554_RS07915 a224cfe93ac0abe96cd845a7fb30def3 227 Gene3D G3DSA:3.40.190.10 144 225 8.7E-25 T 23-04-2016 CFF04554_RS07915 a224cfe93ac0abe96cd845a7fb30def3 227 Gene3D G3DSA:3.40.190.10 3 75 8.7E-25 T 23-04-2016 CFF04554_RS07915 a224cfe93ac0abe96cd845a7fb30def3 227 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 223 23.808 T 23-04-2016 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CFF04554_RS07915 a224cfe93ac0abe96cd845a7fb30def3 227 SUPERFAMILY SSF53850 1 224 1.95E-53 T 23-04-2016 CFF04554_RS07915 a224cfe93ac0abe96cd845a7fb30def3 227 Pfam PF02621 Menaquinone biosynthesis 3 87 5.3E-8 T 23-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 CFF04554_RS07915 a224cfe93ac0abe96cd845a7fb30def3 227 Pfam PF02621 Menaquinone biosynthesis 108 218 1.7E-11 T 23-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 CFF04554_RS07915 a224cfe93ac0abe96cd845a7fb30def3 227 PANTHER PTHR37690 1 220 2.4E-16 T 23-04-2016 CFF04554_RS07915 a224cfe93ac0abe96cd845a7fb30def3 227 Gene3D G3DSA:3.40.190.10 88 143 4.1E-8 T 23-04-2016 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 PRINTS PR00175 Sodium/alanine symporter signature 418 438 4.0E-41 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 PRINTS PR00175 Sodium/alanine symporter signature 221 240 4.0E-41 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 PRINTS PR00175 Sodium/alanine symporter signature 358 380 4.0E-41 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 PRINTS PR00175 Sodium/alanine symporter signature 93 115 4.0E-41 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 PRINTS PR00175 Sodium/alanine symporter signature 193 211 4.0E-41 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 PRINTS PR00175 Sodium/alanine symporter signature 311 329 4.0E-41 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 Pfam PF01235 Sodium:alanine symporter family 60 461 1.8E-139 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 TIGRFAM TIGR00835 agcS: amino acid carrier protein 19 449 3.3E-127 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 PANTHER PTHR30330 1 475 1.6E-193 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CFF04554_RS04165 e3e9b86fad0c2a46f18337139883c661 475 PANTHER PTHR30330:SF1 1 475 1.6E-193 T 23-04-2016 CFF04554_RS04535 ac773e0d4a636638dcc21233e967998e 281 PANTHER PTHR18968:SF89 8 271 9.6E-94 T 23-04-2016 CFF04554_RS04535 ac773e0d4a636638dcc21233e967998e 281 PANTHER PTHR18968 8 271 9.6E-94 T 23-04-2016 CFF04554_RS04535 ac773e0d4a636638dcc21233e967998e 281 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 198 1.0E-32 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CFF04554_RS04535 ac773e0d4a636638dcc21233e967998e 281 SUPERFAMILY SSF52518 14 219 1.68E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04535 ac773e0d4a636638dcc21233e967998e 281 Gene3D G3DSA:3.40.50.970 15 223 1.2E-70 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PRINTS PR00834 HtrA/DegQ protease family signature 172 196 2.9E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PRINTS PR00834 HtrA/DegQ protease family signature 207 224 2.9E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PRINTS PR00834 HtrA/DegQ protease family signature 132 152 2.9E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 2.9E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PRINTS PR00834 HtrA/DegQ protease family signature 313 325 2.9E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PRINTS PR00834 HtrA/DegQ protease family signature 110 122 2.9E-51 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 Pfam PF13365 Trypsin-like peptidase domain 101 236 4.8E-35 T 23-04-2016 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 SMART SM00228 379 463 0.0039 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 SMART SM00228 275 355 7.3E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PANTHER PTHR22939:SF79 4 64 3.2E-105 T 23-04-2016 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PANTHER PTHR22939:SF79 83 407 3.2E-105 T 23-04-2016 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 Gene3D G3DSA:2.30.42.10 382 454 1.4E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 Gene3D G3DSA:2.30.42.10 277 368 9.6E-23 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 SUPERFAMILY SSF50156 382 469 2.76E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 44 464 2.2E-136 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 SUPERFAMILY SSF50494 42 271 1.57E-64 T 23-04-2016 IPR009003 Peptidase S1, PA clan CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 Gene3D G3DSA:2.40.10.10 164 276 2.7E-42 T 23-04-2016 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 SUPERFAMILY SSF50156 257 364 2.1E-21 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 Gene3D G3DSA:2.40.10.10 44 163 3.3E-36 T 23-04-2016 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PANTHER PTHR22939 4 64 3.2E-105 T 23-04-2016 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 PANTHER PTHR22939 83 407 3.2E-105 T 23-04-2016 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 Pfam PF13180 PDZ domain 402 451 1.0E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS03835 a80ef74e4dfbd7edb0325fe024842b49 471 Pfam PF13180 PDZ domain 275 364 6.2E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 Gene3D G3DSA:2.40.50.140 367 433 7.8E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 6 424 6.0E-115 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 2 432 54.969 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 Pfam PF04055 Radical SAM superfamily 141 311 1.6E-21 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 PANTHER PTHR11918 1 433 1.5E-129 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 1.7E-28 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 SUPERFAMILY SSF102114 130 356 1.28E-47 T 23-04-2016 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 PANTHER PTHR11918:SF57 1 433 1.5E-129 T 23-04-2016 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 430 2.7E-103 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 SMART SM00729 136 352 1.5E-40 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CFF04554_RS06990 84d1eed50ca36caa41cbf2d26c9d3860 436 Gene3D G3DSA:3.80.30.20 136 357 1.1E-65 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 261 3.6E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 SUPERFAMILY SSF158472 152 199 3.79E-6 T 23-04-2016 CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 PANTHER PTHR24423 144 405 5.2E-20 T 23-04-2016 CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 SUPERFAMILY SSF55874 288 398 2.23E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 Gene3D G3DSA:1.10.287.130 194 248 3.7E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 390 2.9E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 SUPERFAMILY SSF47384 189 263 2.16E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 Gene3D G3DSA:3.30.565.10 249 391 1.6E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 SMART SM00304 150 203 1.0E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 PANTHER PTHR24423:SF546 144 405 5.2E-20 T 23-04-2016 CFF04554_RS02255 d833af1264c073b8dc1584984833e50c 405 SMART SM00388 204 262 4.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS03425 3f75461b8640f33677a08ee92c2c4564 307 PANTHER PTHR30004:SF6 1 304 2.2E-79 T 23-04-2016 CFF04554_RS03425 3f75461b8640f33677a08ee92c2c4564 307 SUPERFAMILY SSF53659 4 305 1.76E-78 T 23-04-2016 CFF04554_RS03425 3f75461b8640f33677a08ee92c2c4564 307 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 301 1.3E-91 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CFF04554_RS03425 3f75461b8640f33677a08ee92c2c4564 307 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 304 1.4E-88 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CFF04554_RS03425 3f75461b8640f33677a08ee92c2c4564 307 PANTHER PTHR30004 1 304 2.2E-79 T 23-04-2016 CFF04554_RS03425 3f75461b8640f33677a08ee92c2c4564 307 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 305 26.468 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CFF04554_RS03425 3f75461b8640f33677a08ee92c2c4564 307 Gene3D G3DSA:3.40.718.10 2 304 9.3E-102 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 SUPERFAMILY SSF56784 402 420 6.6E-51 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 SUPERFAMILY SSF56784 491 701 6.6E-51 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 404 410 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PANTHER PTHR24093 1 707 2.9E-207 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 SUPERFAMILY SSF81653 210 302 1.07E-24 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 Gene3D G3DSA:3.40.1110.10 426 521 9.1E-12 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 174 672 6.1E-92 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 Pfam PF00122 E1-E2 ATPase 174 393 1.4E-65 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 ProSitePatterns PS01229 Hypothetical cof family signature 2. 594 616 - T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 117 704 7.4E-167 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00943 Copper-transporting ATPase signature 192 210 2.4E-15 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00943 Copper-transporting ATPase signature 172 191 2.4E-15 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00943 Copper-transporting ATPase signature 36 56 2.4E-15 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00943 Copper-transporting ATPase signature 571 588 2.4E-15 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00943 Copper-transporting ATPase signature 326 340 2.4E-15 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00943 Copper-transporting ATPase signature 628 642 2.4E-15 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 Pfam PF00702 haloacid dehalogenase-like hydrolase 398 608 6.9E-39 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PANTHER PTHR24093:SF50 1 707 2.9E-207 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 SUPERFAMILY SSF81665 145 206 1.83E-11 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 SUPERFAMILY SSF81665 304 395 1.83E-11 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 Pfam PF00403 Heavy-metal-associated domain 1 54 2.9E-11 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 SUPERFAMILY SSF55008 1 57 1.02E-11 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 135 703 7.3E-175 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 402 416 1.5E-27 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 551 1.5E-27 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 613 1.5E-27 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 253 267 1.5E-27 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 519 530 1.5E-27 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 617 629 1.5E-27 T 23-04-2016 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 Gene3D G3DSA:2.70.150.10 148 303 6.0E-28 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 Gene3D G3DSA:3.40.50.1000 522 663 2.9E-48 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 Gene3D G3DSA:3.40.50.1000 375 418 2.9E-48 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS02105 6006ccf37f037f619c19f4ed95c4f821 708 Gene3D G3DSA:3.30.70.100 1 56 9.2E-15 T 23-04-2016 CFF04554_RS00780 77f05274b9dc60f5d4c675c276750d83 143 Gene3D G3DSA:3.40.1260.10 27 143 1.5E-16 T 23-04-2016 IPR027396 DsrEFH-like CFF04554_RS00780 77f05274b9dc60f5d4c675c276750d83 143 Pfam PF02635 DsrE/DsrF-like family 31 143 3.3E-9 T 23-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein CFF04554_RS00780 77f05274b9dc60f5d4c675c276750d83 143 SUPERFAMILY SSF75169 30 143 1.63E-15 T 23-04-2016 IPR027396 DsrEFH-like CFF04554_RS08745 1a6031709bb70a028691b870f744b71b 222 Pfam PF00484 Carbonic anhydrase 34 192 1.9E-48 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CFF04554_RS08745 1a6031709bb70a028691b870f744b71b 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CFF04554_RS08745 1a6031709bb70a028691b870f744b71b 222 Gene3D G3DSA:3.40.1050.10 3 205 2.2E-62 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CFF04554_RS08745 1a6031709bb70a028691b870f744b71b 222 PANTHER PTHR11002 3 210 3.8E-66 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CFF04554_RS08745 1a6031709bb70a028691b870f744b71b 222 SMART SM00947 27 196 4.2E-62 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CFF04554_RS08745 1a6031709bb70a028691b870f744b71b 222 SUPERFAMILY SSF53056 3 208 7.06E-62 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CFF04554_RS08745 1a6031709bb70a028691b870f744b71b 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 84 104 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CFF04554_RS08745 1a6031709bb70a028691b870f744b71b 222 PANTHER PTHR11002:SF13 3 210 3.8E-66 T 23-04-2016 CFF04554_RS04880 74df933709c7139f58722c448be50838 498 Pfam PF02080 TrkA-C domain 176 240 2.2E-9 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS04880 74df933709c7139f58722c448be50838 498 SUPERFAMILY SSF116726 175 241 5.49E-8 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS04880 74df933709c7139f58722c448be50838 498 Gene3D G3DSA:3.30.70.1450 176 240 6.3E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS02010 a75432ff8118f83424e3e6496ca8371c 351 PANTHER PTHR30482 7 75 5.1E-85 T 23-04-2016 CFF04554_RS02010 a75432ff8118f83424e3e6496ca8371c 351 PANTHER PTHR30482 93 338 5.1E-85 T 23-04-2016 CFF04554_RS02010 a75432ff8118f83424e3e6496ca8371c 351 PANTHER PTHR30482:SF10 7 75 5.1E-85 T 23-04-2016 CFF04554_RS02010 a75432ff8118f83424e3e6496ca8371c 351 PANTHER PTHR30482:SF10 93 338 5.1E-85 T 23-04-2016 CFF04554_RS02010 a75432ff8118f83424e3e6496ca8371c 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 326 1.8E-39 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CFF04554_RS06345 06f74254900ca978ab6f3c3c0cf2888a 242 Pfam PF00005 ABC transporter 17 165 2.1E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS06345 06f74254900ca978ab6f3c3c0cf2888a 242 Gene3D G3DSA:3.40.50.300 1 236 1.9E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06345 06f74254900ca978ab6f3c3c0cf2888a 242 SUPERFAMILY SSF52540 1 234 2.79E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06345 06f74254900ca978ab6f3c3c0cf2888a 242 SMART SM00382 26 217 2.5E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS06345 06f74254900ca978ab6f3c3c0cf2888a 242 PANTHER PTHR24220 3 241 7.8E-129 T 23-04-2016 CFF04554_RS06345 06f74254900ca978ab6f3c3c0cf2888a 242 PANTHER PTHR24220:SF327 3 241 7.8E-129 T 23-04-2016 CFF04554_RS06345 06f74254900ca978ab6f3c3c0cf2888a 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS06345 06f74254900ca978ab6f3c3c0cf2888a 242 PIRSF PIRSF039085 1 241 1.8E-105 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CFF04554_RS07110 d0b867230bb8700ee5bcfeefe2fbc699 272 Gene3D G3DSA:3.30.420.10 7 218 5.4E-29 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS07110 d0b867230bb8700ee5bcfeefe2fbc699 272 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 48 259 4.0E-76 T 23-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like CFF04554_RS07110 d0b867230bb8700ee5bcfeefe2fbc699 272 SUPERFAMILY SSF53098 6 226 9.28E-39 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS05875 9f33bf90c43c26d29c83be5a7f8e66bc 189 SUPERFAMILY SSF111304 6 189 2.48E-55 T 23-04-2016 IPR023627 Recombination protein RecR CFF04554_RS05875 9f33bf90c43c26d29c83be5a7f8e66bc 189 PANTHER PTHR30446 11 189 5.4E-49 T 23-04-2016 CFF04554_RS05875 9f33bf90c43c26d29c83be5a7f8e66bc 189 Hamap MF_00017 Recombination protein RecR [recR]. 1 189 56.171 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CFF04554_RS05875 9f33bf90c43c26d29c83be5a7f8e66bc 189 Pfam PF02132 RecR protein 43 80 1.3E-12 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger CFF04554_RS05875 9f33bf90c43c26d29c83be5a7f8e66bc 189 PANTHER PTHR30446:SF0 11 189 5.4E-49 T 23-04-2016 CFF04554_RS05875 9f33bf90c43c26d29c83be5a7f8e66bc 189 TIGRFAM TIGR00615 recR: recombination protein RecR 6 187 1.2E-53 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CFF04554_RS05875 9f33bf90c43c26d29c83be5a7f8e66bc 189 ProSitePatterns PS01300 RecR protein signature. 59 80 - T 23-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CFF04554_RS05875 9f33bf90c43c26d29c83be5a7f8e66bc 189 Pfam PF13662 Toprim domain 83 161 5.4E-6 T 23-04-2016 IPR006171 Toprim domain CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 135 208 4.5E-25 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 Pfam PF03477 ATP cone domain 1 87 2.1E-16 T 23-04-2016 IPR005144 ATP-cone domain CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 SUPERFAMILY SSF51998 212 445 1.08E-173 T 23-04-2016 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 SUPERFAMILY SSF51998 490 770 1.08E-173 T 23-04-2016 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 138 768 9.2E-188 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 545 567 2.9E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 649 676 2.9E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 288 307 2.9E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 507 530 2.9E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 596 2.9E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 419 430 2.9E-43 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PANTHER PTHR11573:SF6 492 770 6.8E-281 T 23-04-2016 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PANTHER PTHR11573:SF6 3 435 6.8E-281 T 23-04-2016 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 Pfam PF02867 Ribonucleotide reductase, barrel domain 213 765 4.7E-167 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 SUPERFAMILY SSF48168 6 211 5.1E-68 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PANTHER PTHR11573 492 770 6.8E-281 T 23-04-2016 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 PANTHER PTHR11573 3 435 6.8E-281 T 23-04-2016 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 638 660 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 Gene3D G3DSA:3.20.70.20 649 770 7.0E-74 T 23-04-2016 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 Gene3D G3DSA:3.20.70.20 493 593 7.0E-74 T 23-04-2016 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 Gene3D G3DSA:3.20.70.20 123 334 7.0E-74 T 23-04-2016 CFF04554_RS09120 a9c66953c83a22f415ba4ea03fcdc274 791 Gene3D G3DSA:3.20.70.20 385 431 7.0E-74 T 23-04-2016 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Pfam PF01926 50S ribosome-binding GTPase 213 329 1.4E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Gene3D G3DSA:3.40.50.300 284 378 2.0E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Gene3D G3DSA:3.30.1360.120 3 116 1.2E-36 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Gene3D G3DSA:3.40.50.300 188 242 4.3E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 PANTHER PTHR11649 4 438 7.5E-114 T 23-04-2016 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Pfam PF10396 GTP-binding protein TrmE N-terminus 3 115 2.6E-33 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 212 339 4.6E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Pfam PF12631 MnmE helical domain 118 435 8.2E-37 T 23-04-2016 IPR025867 MnmE, helical domain CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 8 438 3.0E-113 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Gene3D G3DSA:1.20.120.430 117 177 1.1E-44 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Gene3D G3DSA:1.20.120.430 243 266 1.1E-44 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Gene3D G3DSA:1.20.120.430 379 438 1.1E-44 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 1 438 28.871 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 SUPERFAMILY SSF52540 192 341 3.13E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 SUPERFAMILY SSF52540 68 158 3.13E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02755 cc4a90a48d1ea119881190e6225dfba9 438 PANTHER PTHR11649:SF56 4 438 7.5E-114 T 23-04-2016 CFF04554_RS08765 22fc692884a5873ba5740e1e2deaae07 356 Gene3D G3DSA:3.60.150.10 8 352 1.1E-135 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS08765 22fc692884a5873ba5740e1e2deaae07 356 PIRSF PIRSF001456 1 356 8.3E-127 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS08765 22fc692884a5873ba5740e1e2deaae07 356 Pfam PF01264 Chorismate synthase 8 341 8.0E-125 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS08765 22fc692884a5873ba5740e1e2deaae07 356 ProSitePatterns PS00788 Chorismate synthase signature 2. 121 137 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS08765 22fc692884a5873ba5740e1e2deaae07 356 Hamap MF_00300 Chorismate synthase [aroC]. 8 348 34.277 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS08765 22fc692884a5873ba5740e1e2deaae07 356 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS08765 22fc692884a5873ba5740e1e2deaae07 356 PANTHER PTHR21085 1 342 1.6E-158 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS08765 22fc692884a5873ba5740e1e2deaae07 356 TIGRFAM TIGR00033 aroC: chorismate synthase 8 345 2.4E-115 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS08765 22fc692884a5873ba5740e1e2deaae07 356 SUPERFAMILY SSF103263 1 347 2.75E-129 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CFF04554_RS00080 c486fd0a4048f679d65bf45cdbb93eee 325 Pfam PF04332 Protein of unknown function (DUF475) 42 321 3.5E-89 T 23-04-2016 IPR007427 Protein of unknown function DUF475 CFF04554_RS00080 c486fd0a4048f679d65bf45cdbb93eee 325 PANTHER PTHR30238:SF3 1 84 1.7E-91 T 23-04-2016 CFF04554_RS00080 c486fd0a4048f679d65bf45cdbb93eee 325 PANTHER PTHR30238:SF3 203 320 1.7E-91 T 23-04-2016 CFF04554_RS00080 c486fd0a4048f679d65bf45cdbb93eee 325 PANTHER PTHR30238:SF3 109 169 1.7E-91 T 23-04-2016 CFF04554_RS00080 c486fd0a4048f679d65bf45cdbb93eee 325 PANTHER PTHR30238 1 84 1.7E-91 T 23-04-2016 CFF04554_RS00080 c486fd0a4048f679d65bf45cdbb93eee 325 PANTHER PTHR30238 203 320 1.7E-91 T 23-04-2016 CFF04554_RS00080 c486fd0a4048f679d65bf45cdbb93eee 325 PANTHER PTHR30238 109 169 1.7E-91 T 23-04-2016 CFF04554_RS00415 0ecdb5a0a4fc4c86f732eb05a51bd6db 203 SUPERFAMILY SSF52540 1 162 5.8E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00415 0ecdb5a0a4fc4c86f732eb05a51bd6db 203 Pfam PF13500 AAA domain 2 169 1.9E-26 T 23-04-2016 CFF04554_RS00415 0ecdb5a0a4fc4c86f732eb05a51bd6db 203 PANTHER PTHR21343:SF0 1 160 4.0E-24 T 23-04-2016 CFF04554_RS00415 0ecdb5a0a4fc4c86f732eb05a51bd6db 203 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 178 19.579 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CFF04554_RS00415 0ecdb5a0a4fc4c86f732eb05a51bd6db 203 Gene3D G3DSA:3.40.50.300 1 169 9.2E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00415 0ecdb5a0a4fc4c86f732eb05a51bd6db 203 PANTHER PTHR21343 1 160 4.0E-24 T 23-04-2016 CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 PANTHER PTHR11649:SF3 2 285 4.5E-70 T 23-04-2016 CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 150 2.4E-23 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 Pfam PF07650 KH domain 201 277 1.9E-14 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 PANTHER PTHR11649 2 285 4.5E-70 T 23-04-2016 CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 TIGRFAM TIGR00436 era: GTP-binding protein Era 4 271 1.0E-64 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 Pfam PF01926 50S ribosome-binding GTPase 6 116 1.0E-19 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 SUPERFAMILY SSF52540 6 174 2.13E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 SUPERFAMILY SSF54814 175 285 1.18E-29 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 Hamap MF_00367 GTPase Era [era]. 1 288 30.163 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 Gene3D G3DSA:3.40.50.300 5 184 3.2E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04970 605be37e60bd59a74f567c7b9b258cc7 289 Gene3D G3DSA:3.30.300.20 185 284 4.0E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 74 1.0E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 1 74 18.639 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 73 1.1E-32 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 Gene3D G3DSA:4.10.640.10 9 74 4.8E-27 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 PANTHER PTHR13479 1 72 1.8E-18 T 23-04-2016 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 1.2E-14 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 1.2E-14 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 1.2E-14 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 1.2E-14 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 Pfam PF01084 Ribosomal protein S18 18 69 2.0E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05855 cf0598c1f738c435a3f64a316216e001 86 SUPERFAMILY SSF46911 4 74 1.96E-23 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00590 a3c4368a00f8b69c0522514f4b3586bb 471 SUPERFAMILY SSF56954 1 454 9.02E-99 T 23-04-2016 CFF04554_RS00590 a3c4368a00f8b69c0522514f4b3586bb 471 PANTHER PTHR30203:SF3 38 453 4.7E-89 T 23-04-2016 CFF04554_RS00590 a3c4368a00f8b69c0522514f4b3586bb 471 Gene3D G3DSA:1.20.1600.10 43 455 8.2E-105 T 23-04-2016 CFF04554_RS00590 a3c4368a00f8b69c0522514f4b3586bb 471 PANTHER PTHR30203 38 453 4.7E-89 T 23-04-2016 CFF04554_RS00590 a3c4368a00f8b69c0522514f4b3586bb 471 Pfam PF02321 Outer membrane efflux protein 273 449 1.3E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CFF04554_RS00590 a3c4368a00f8b69c0522514f4b3586bb 471 Pfam PF02321 Outer membrane efflux protein 52 241 2.6E-24 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CFF04554_RS00590 a3c4368a00f8b69c0522514f4b3586bb 471 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 39 453 2.4E-91 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 SUPERFAMILY SSF52440 2 115 7.91E-43 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 SUPERFAMILY SSF51246 333 445 3.77E-43 T 23-04-2016 IPR011054 Rudiment single hybrid motif CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 SMART SM00878 338 443 5.1E-57 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 Gene3D G3DSA:3.40.50.20 4 131 2.7E-45 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 SUPERFAMILY SSF56059 85 346 1.85E-70 T 23-04-2016 CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 4 444 2.6E-201 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 324 6.8E-83 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 PANTHER PTHR18866 4 445 2.1E-278 T 23-04-2016 CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 3.0E-39 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 Gene3D G3DSA:3.30.1490.20 132 204 1.5E-31 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 Pfam PF02785 Biotin carboxylase C-terminal domain 338 443 7.0E-39 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal CFF04554_RS07945 de04a93c0434026ce0890a3fee77c25a 445 Gene3D G3DSA:3.30.470.20 205 445 2.5E-102 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS07845 550d974b87e9586c93d303b159996f63 178 SUPERFAMILY SSF53706 46 178 2.09E-48 T 23-04-2016 CFF04554_RS07845 550d974b87e9586c93d303b159996f63 178 Gene3D G3DSA:2.20.25.90 47 105 4.9E-16 T 23-04-2016 CFF04554_RS07845 550d974b87e9586c93d303b159996f63 178 Gene3D G3DSA:3.40.50.740 106 174 1.1E-23 T 23-04-2016 CFF04554_RS07845 550d974b87e9586c93d303b159996f63 178 Pfam PF00384 Molybdopterin oxidoreductase 104 173 5.0E-12 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CFF04554_RS07845 550d974b87e9586c93d303b159996f63 178 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 48 92 1.1E-11 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CFF04554_RS07845 550d974b87e9586c93d303b159996f63 178 PANTHER PTHR11615:SF140 51 178 1.4E-61 T 23-04-2016 CFF04554_RS07845 550d974b87e9586c93d303b159996f63 178 SMART SM00926 47 101 8.9E-12 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CFF04554_RS07845 550d974b87e9586c93d303b159996f63 178 PANTHER PTHR11615 51 178 1.4E-61 T 23-04-2016 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 PIRSF PIRSF000414 1 510 4.1E-189 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 131 441 3.4E-95 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 510 38.133 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 SMART SM00851 12 126 2.3E-51 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 SUPERFAMILY SSF52335 2 190 1.06E-65 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 SUPERFAMILY SSF53927 204 510 3.31E-104 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 SMART SM00798 131 442 1.0E-141 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 PANTHER PTHR11692:SF2 1 510 2.6E-228 T 23-04-2016 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 Gene3D G3DSA:3.40.50.1380 2 182 5.9E-75 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 PANTHER PTHR11692 1 510 2.6E-228 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 510 9.0E-164 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 Gene3D G3DSA:3.40.140.20 356 500 1.2E-47 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 Pfam PF02142 MGS-like domain 13 125 3.4E-22 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS02770 838b919214faeef9eaef24ad5b50f7c7 510 Gene3D G3DSA:3.40.140.20 235 346 1.2E-33 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 SUPERFAMILY SSF158472 159 205 1.7E-5 T 23-04-2016 CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 Pfam PF00672 HAMP domain 140 200 7.7E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 PANTHER PTHR24423 1 7 6.2E-19 T 23-04-2016 CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 PANTHER PTHR24423 151 404 6.2E-19 T 23-04-2016 CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 SMART SM00388 209 267 1.3E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 Gene3D G3DSA:3.30.565.10 280 392 4.5E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 SUPERFAMILY SSF55874 278 396 1.92E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 392 6.0E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 Gene3D G3DSA:1.10.287.130 202 262 5.3E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 SUPERFAMILY SSF47384 193 266 5.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 PANTHER PTHR24423:SF546 1 7 6.2E-19 T 23-04-2016 CFF04554_RS03825 40dbe4bc6ab3e4a03ce7a6b283029184 410 PANTHER PTHR24423:SF546 151 404 6.2E-19 T 23-04-2016 CFF04554_RS02160 26d7ad6983ca6ef33daaf966e3fb93a5 227 Pfam PF00072 Response regulator receiver domain 11 119 3.4E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS02160 26d7ad6983ca6ef33daaf966e3fb93a5 227 Gene3D G3DSA:1.10.10.10 137 222 5.9E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS02160 26d7ad6983ca6ef33daaf966e3fb93a5 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 221 8.4E-8 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS02160 26d7ad6983ca6ef33daaf966e3fb93a5 227 Gene3D G3DSA:3.40.50.2300 9 127 7.3E-26 T 23-04-2016 CFF04554_RS02160 26d7ad6983ca6ef33daaf966e3fb93a5 227 PANTHER PTHR26402 9 222 1.7E-31 T 23-04-2016 CFF04554_RS02160 26d7ad6983ca6ef33daaf966e3fb93a5 227 SMART SM00448 9 120 5.2E-19 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS02160 26d7ad6983ca6ef33daaf966e3fb93a5 227 SUPERFAMILY SSF52172 8 179 1.37E-28 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS02160 26d7ad6983ca6ef33daaf966e3fb93a5 227 SMART SM00862 151 221 1.7E-6 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 SUPERFAMILY SSF52943 3 293 9.03E-80 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 Gene3D G3DSA:1.10.287.80 243 289 2.5E-26 T 23-04-2016 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 293 1.3E-92 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 Pfam PF00231 ATP synthase 3 293 7.5E-82 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 Gene3D G3DSA:1.10.287.80 208 242 3.4E-25 T 23-04-2016 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 Gene3D G3DSA:1.10.287.80 19 60 3.4E-25 T 23-04-2016 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 294 31.514 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 Gene3D G3DSA:3.40.1380.10 79 198 1.6E-34 T 23-04-2016 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 PRINTS PR00126 ATP synthase gamma subunit signature 241 260 1.4E-31 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 PRINTS PR00126 ATP synthase gamma subunit signature 272 293 1.4E-31 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 PRINTS PR00126 ATP synthase gamma subunit signature 172 189 1.4E-31 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 PRINTS PR00126 ATP synthase gamma subunit signature 79 98 1.4E-31 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07765 1a5fb352c00425f045ee4f0be3567089 295 PANTHER PTHR11693 1 295 2.7E-87 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS01940 5917c82d4b89f38183a1804f8b33e32a 141 PANTHER PTHR11545 2 136 4.5E-56 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01940 5917c82d4b89f38183a1804f8b33e32a 141 SUPERFAMILY SSF52161 2 135 2.88E-49 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01940 5917c82d4b89f38183a1804f8b33e32a 141 Pfam PF00572 Ribosomal protein L13 14 135 3.5E-49 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01940 5917c82d4b89f38183a1804f8b33e32a 141 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 137 3.3E-55 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01940 5917c82d4b89f38183a1804f8b33e32a 141 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 14 137 26.249 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01940 5917c82d4b89f38183a1804f8b33e32a 141 PIRSF PIRSF002181 1 140 9.4E-45 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01940 5917c82d4b89f38183a1804f8b33e32a 141 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 23-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CFF04554_RS01940 5917c82d4b89f38183a1804f8b33e32a 141 Gene3D G3DSA:3.90.1180.10 4 135 7.8E-54 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06280 2484b53db60106f425aba727ab08bd52 395 PANTHER PTHR23417:SF14 123 284 5.4E-30 T 23-04-2016 CFF04554_RS06280 2484b53db60106f425aba727ab08bd52 395 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 92 287 23.174 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CFF04554_RS06280 2484b53db60106f425aba727ab08bd52 395 PANTHER PTHR23417 123 284 5.4E-30 T 23-04-2016 CFF04554_RS06280 2484b53db60106f425aba727ab08bd52 395 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 119 276 1.2E-36 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CFF04554_RS06280 2484b53db60106f425aba727ab08bd52 395 Gene3D G3DSA:3.40.50.150 109 241 1.3E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS06280 2484b53db60106f425aba727ab08bd52 395 SUPERFAMILY SSF53335 121 285 5.0E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS06280 2484b53db60106f425aba727ab08bd52 395 Pfam PF02390 Putative methyltransferase 122 281 4.5E-34 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CFF04554_RS09365 7cecf524f6e2ee9f273db631fb720668 212 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 24 106 2.6E-26 T 23-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family CFF04554_RS09365 7cecf524f6e2ee9f273db631fb720668 212 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 20 110 7.2E-30 T 23-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family CFF04554_RS09365 7cecf524f6e2ee9f273db631fb720668 212 Gene3D G3DSA:1.10.10.60 170 206 3.4E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS04265 48bb0b12281683d49a6aba43a46e34a2 81 Gene3D G3DSA:3.10.290.10 1 78 2.3E-19 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS04265 48bb0b12281683d49a6aba43a46e34a2 81 SMART SM00363 1 61 1.5E-4 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS04265 48bb0b12281683d49a6aba43a46e34a2 81 PIRSF PIRSF038881 1 81 9.5E-22 T 23-04-2016 IPR025490 RNA-binding protein, HP1423 type CFF04554_RS04265 48bb0b12281683d49a6aba43a46e34a2 81 Pfam PF01479 S4 domain 1 47 4.3E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS04265 48bb0b12281683d49a6aba43a46e34a2 81 SUPERFAMILY SSF55174 1 78 4.19E-18 T 23-04-2016 CFF04554_RS08090 ced00df7df4eec72ac5c7c688f4e1950 319 PANTHER PTHR11228 6 315 7.3E-13 T 23-04-2016 CFF04554_RS08090 ced00df7df4eec72ac5c7c688f4e1950 319 Pfam PF13186 Iron-sulfur cluster-binding domain 244 311 3.3E-9 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CFF04554_RS08090 ced00df7df4eec72ac5c7c688f4e1950 319 Gene3D G3DSA:3.20.20.70 28 313 1.1E-35 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS08090 ced00df7df4eec72ac5c7c688f4e1950 319 SUPERFAMILY SSF102114 27 312 7.72E-37 T 23-04-2016 CFF04554_RS08090 ced00df7df4eec72ac5c7c688f4e1950 319 Pfam PF04055 Radical SAM superfamily 35 203 2.1E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS08090 ced00df7df4eec72ac5c7c688f4e1950 319 Pfam PF13353 4Fe-4S single cluster domain 37 155 3.2E-5 T 23-04-2016 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 Pfam PF00140 Sigma-70 factor, region 1.2 106 137 2.4E-13 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 581 607 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 383 620 3.1E-115 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 Pfam PF04542 Sigma-70 region 2 389 456 4.3E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 PANTHER PTHR30603:SF0 66 159 3.7E-161 T 23-04-2016 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 PANTHER PTHR30603:SF0 344 621 3.7E-161 T 23-04-2016 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 Pfam PF04539 Sigma-70 region 3 466 542 1.9E-21 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 Pfam PF04545 Sigma-70, region 4 555 609 9.2E-20 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 411 424 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 SUPERFAMILY SSF88659 460 533 1.22E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 PANTHER PTHR30603 66 159 3.7E-161 T 23-04-2016 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 PANTHER PTHR30603 344 621 3.7E-161 T 23-04-2016 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 383 609 7.9E-41 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 621 35.866 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 SUPERFAMILY SSF88946 122 454 6.12E-64 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 Gene3D G3DSA:1.10.10.10 549 621 2.7E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 Gene3D G3DSA:1.10.10.10 460 511 3.5E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 SUPERFAMILY SSF88659 518 619 6.17E-26 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 PRINTS PR00046 Major sigma-70 factor signature 581 596 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 PRINTS PR00046 Major sigma-70 factor signature 559 571 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 PRINTS PR00046 Major sigma-70 factor signature 435 443 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 PRINTS PR00046 Major sigma-70 factor signature 411 424 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 PRINTS PR00046 Major sigma-70 factor signature 596 607 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 Gene3D G3DSA:1.10.601.10 124 456 5.5E-85 T 23-04-2016 CFF04554_RS02575 fac46d10967291a867f8edb5a7ea635e 623 Gene3D G3DSA:1.10.601.10 45 123 9.7E-4 T 23-04-2016 CFF04554_RS02735 e0ffab88fc34978c86f87e33fb0ff462 95 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 35 49 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 CFF04554_RS02735 e0ffab88fc34978c86f87e33fb0ff462 95 Pfam PF00825 Ribonuclease P 2 91 2.9E-20 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CFF04554_RS02735 e0ffab88fc34978c86f87e33fb0ff462 95 PANTHER PTHR33992 1 91 6.2E-13 T 23-04-2016 CFF04554_RS02735 e0ffab88fc34978c86f87e33fb0ff462 95 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 92 5.5E-15 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CFF04554_RS02735 e0ffab88fc34978c86f87e33fb0ff462 95 SUPERFAMILY SSF54211 2 92 8.34E-20 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS02735 e0ffab88fc34978c86f87e33fb0ff462 95 Gene3D G3DSA:3.30.230.10 2 92 2.0E-21 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS02735 e0ffab88fc34978c86f87e33fb0ff462 95 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 3 84 4.0E-11 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CFF04554_RS04585 56ce9dc821a06e31f1d062f10ecca7c2 476 PANTHER PTHR11699 19 475 1.8E-258 T 23-04-2016 CFF04554_RS04585 56ce9dc821a06e31f1d062f10ecca7c2 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CFF04554_RS04585 56ce9dc821a06e31f1d062f10ecca7c2 476 SUPERFAMILY SSF53720 19 475 1.31E-152 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CFF04554_RS04585 56ce9dc821a06e31f1d062f10ecca7c2 476 Pfam PF00171 Aldehyde dehydrogenase family 20 471 2.9E-159 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CFF04554_RS04585 56ce9dc821a06e31f1d062f10ecca7c2 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CFF04554_RS04585 56ce9dc821a06e31f1d062f10ecca7c2 476 Gene3D G3DSA:3.40.309.10 263 447 4.7E-67 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CFF04554_RS04585 56ce9dc821a06e31f1d062f10ecca7c2 476 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 24 470 7.4E-201 T 23-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 CFF04554_RS04585 56ce9dc821a06e31f1d062f10ecca7c2 476 PANTHER PTHR11699:SF49 19 475 1.8E-258 T 23-04-2016 CFF04554_RS04585 56ce9dc821a06e31f1d062f10ecca7c2 476 Gene3D G3DSA:3.40.605.10 4 262 4.3E-86 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CFF04554_RS04450 1deb0ad41fc6e673eab0cce8185cc837 392 Gene3D G3DSA:3.90.105.10 123 154 9.5E-12 T 23-04-2016 CFF04554_RS04450 1deb0ad41fc6e673eab0cce8185cc837 392 Gene3D G3DSA:2.170.190.11 43 122 7.9E-21 T 23-04-2016 CFF04554_RS04450 1deb0ad41fc6e673eab0cce8185cc837 392 SMART SM00852 172 309 7.0E-25 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS04450 1deb0ad41fc6e673eab0cce8185cc837 392 Pfam PF00994 Probable molybdopterin binding domain 172 308 9.5E-18 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS04450 1deb0ad41fc6e673eab0cce8185cc837 392 Pfam PF03453 MoeA N-terminal region (domain I and II) 15 159 2.1E-26 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS04450 1deb0ad41fc6e673eab0cce8185cc837 392 PANTHER PTHR10192 1 346 2.0E-88 T 23-04-2016 CFF04554_RS04450 1deb0ad41fc6e673eab0cce8185cc837 392 SUPERFAMILY SSF63882 2 166 2.75E-43 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS04450 1deb0ad41fc6e673eab0cce8185cc837 392 SUPERFAMILY SSF53218 169 314 4.06E-29 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS04450 1deb0ad41fc6e673eab0cce8185cc837 392 Gene3D G3DSA:3.40.980.10 155 324 9.9E-43 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS05015 d44bbe95166c8061c536ebbf18399747 413 PANTHER PTHR30012:SF0 16 413 1.1E-92 T 23-04-2016 CFF04554_RS05015 d44bbe95166c8061c536ebbf18399747 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 74 86 3.5E-8 T 23-04-2016 IPR003004 GspF/PilC family CFF04554_RS05015 d44bbe95166c8061c536ebbf18399747 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 173 201 3.5E-8 T 23-04-2016 IPR003004 GspF/PilC family CFF04554_RS05015 d44bbe95166c8061c536ebbf18399747 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 393 412 3.5E-8 T 23-04-2016 IPR003004 GspF/PilC family CFF04554_RS05015 d44bbe95166c8061c536ebbf18399747 413 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 391 3.5E-8 T 23-04-2016 IPR003004 GspF/PilC family CFF04554_RS05015 d44bbe95166c8061c536ebbf18399747 413 Pfam PF00482 Type II secretion system (T2SS), protein F 79 201 1.4E-24 T 23-04-2016 IPR018076 Type II secretion system F domain CFF04554_RS05015 d44bbe95166c8061c536ebbf18399747 413 Pfam PF00482 Type II secretion system (T2SS), protein F 288 404 2.6E-22 T 23-04-2016 IPR018076 Type II secretion system F domain CFF04554_RS05015 d44bbe95166c8061c536ebbf18399747 413 PANTHER PTHR30012 16 413 1.1E-92 T 23-04-2016 CFF04554_RS07790 03d348c29a9a54ed2e6419264bb8b157 281 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 29 196 5.0E-55 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CFF04554_RS07790 03d348c29a9a54ed2e6419264bb8b157 281 SMART SM00470 28 117 4.4E-33 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CFF04554_RS07790 03d348c29a9a54ed2e6419264bb8b157 281 Pfam PF02195 ParB-like nuclease domain 30 117 1.3E-25 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CFF04554_RS07790 03d348c29a9a54ed2e6419264bb8b157 281 Gene3D G3DSA:3.90.1530.10 27 122 1.8E-35 T 23-04-2016 CFF04554_RS07790 03d348c29a9a54ed2e6419264bb8b157 281 PANTHER PTHR33375:SF3 3 247 2.7E-76 T 23-04-2016 CFF04554_RS07790 03d348c29a9a54ed2e6419264bb8b157 281 SUPERFAMILY SSF110849 30 163 1.88E-31 T 23-04-2016 IPR003115 ParB/Sulfiredoxin CFF04554_RS07790 03d348c29a9a54ed2e6419264bb8b157 281 PANTHER PTHR33375 3 247 2.7E-76 T 23-04-2016 CFF04554_RS00430 0ee7e0784c3328553e3697a52bb5a818 368 Gene3D G3DSA:3.90.1150.10 266 348 1.4E-13 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS00430 0ee7e0784c3328553e3697a52bb5a818 368 Pfam PF00155 Aminotransferase class I and II 32 346 2.8E-34 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CFF04554_RS00430 0ee7e0784c3328553e3697a52bb5a818 368 PANTHER PTHR13693 1 362 1.7E-96 T 23-04-2016 CFF04554_RS00430 0ee7e0784c3328553e3697a52bb5a818 368 SUPERFAMILY SSF53383 19 364 6.82E-66 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS00430 0ee7e0784c3328553e3697a52bb5a818 368 PANTHER PTHR13693:SF59 1 362 1.7E-96 T 23-04-2016 CFF04554_RS00430 0ee7e0784c3328553e3697a52bb5a818 368 Gene3D G3DSA:3.40.640.10 61 265 6.8E-60 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 Gene3D G3DSA:2.30.33.40 1 86 8.4E-24 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 Pfam PF00166 Chaperonin 10 Kd subunit 2 86 1.2E-23 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 PANTHER PTHR10772 1 86 7.1E-26 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 SMART SM00883 2 86 9.7E-37 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 PRINTS PR00297 10kDa chaperonin signature 3 18 3.6E-19 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 PRINTS PR00297 10kDa chaperonin signature 26 47 3.6E-19 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 PRINTS PR00297 10kDa chaperonin signature 52 64 3.6E-19 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 PRINTS PR00297 10kDa chaperonin signature 73 86 3.6E-19 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 Hamap MF_00580 10 kDa chaperonin [groS]. 2 87 20.346 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CFF04554_RS03515 f80b7e241d38af830810077d2442fd4b 87 SUPERFAMILY SSF50129 1 86 1.41E-22 T 23-04-2016 IPR011032 GroES-like CFF04554_RS03810 f15a960804bfb47c0ecefb84f77bd656 641 Pfam PF02687 FtsX-like permease family 521 634 2.8E-21 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CFF04554_RS03810 f15a960804bfb47c0ecefb84f77bd656 641 SMART SM00382 30 217 1.2E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS03810 f15a960804bfb47c0ecefb84f77bd656 641 PANTHER PTHR24220:SF86 3 225 3.3E-103 T 23-04-2016 CFF04554_RS03810 f15a960804bfb47c0ecefb84f77bd656 641 Gene3D G3DSA:3.40.50.300 1 221 2.7E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03810 f15a960804bfb47c0ecefb84f77bd656 641 Pfam PF12704 MacB-like periplasmic core domain 267 483 5.9E-32 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CFF04554_RS03810 f15a960804bfb47c0ecefb84f77bd656 641 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS03810 f15a960804bfb47c0ecefb84f77bd656 641 SUPERFAMILY SSF52540 1 226 9.45E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03810 f15a960804bfb47c0ecefb84f77bd656 641 Pfam PF00005 ABC transporter 21 169 5.4E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS03810 f15a960804bfb47c0ecefb84f77bd656 641 PANTHER PTHR24220 3 225 3.3E-103 T 23-04-2016 CFF04554_RS00850 805acc732e52ecbba8a7bd854716b028 251 Pfam PF10670 Domain of unknown function (DUF4198) 20 224 8.4E-44 T 23-04-2016 IPR019613 Protein of unknown function DUF4198 CFF04554_RS06360 d81ab86649347c46e7064124e29d77bb 202 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 1 201 20.95 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CFF04554_RS06360 d81ab86649347c46e7064124e29d77bb 202 Pfam PF02581 Thiamine monophosphate synthase/TENI 4 182 2.3E-48 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CFF04554_RS06360 d81ab86649347c46e7064124e29d77bb 202 Gene3D G3DSA:3.20.20.70 2 201 5.6E-50 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS06360 d81ab86649347c46e7064124e29d77bb 202 PANTHER PTHR20857:SF15 3 202 3.8E-46 T 23-04-2016 CFF04554_RS06360 d81ab86649347c46e7064124e29d77bb 202 PANTHER PTHR20857 3 202 3.8E-46 T 23-04-2016 CFF04554_RS06360 d81ab86649347c46e7064124e29d77bb 202 SUPERFAMILY SSF51391 2 198 5.62E-46 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CFF04554_RS06360 d81ab86649347c46e7064124e29d77bb 202 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 3 193 1.3E-47 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 Hamap MF_01694 Biotin synthase [bioB]. 2 276 31.514 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 PANTHER PTHR22976 5 274 1.1E-71 T 23-04-2016 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 SMART SM00876 185 275 8.8E-20 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 185 274 8.7E-8 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 TIGRFAM TIGR00433 bioB: biotin synthase 2 273 5.2E-81 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 Pfam PF04055 Radical SAM superfamily 15 169 3.8E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 Gene3D G3DSA:3.20.20.70 5 275 2.4E-59 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 PIRSF PIRSF001619 1 279 7.4E-75 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 SUPERFAMILY SSF102114 7 273 4.05E-50 T 23-04-2016 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 SMART SM00729 8 213 2.4E-22 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS00880 5eaaa42a841f0c59e66283947333c5d8 280 PANTHER PTHR22976:SF1 5 274 1.1E-71 T 23-04-2016 CFF04554_RS04640 53e08ec65f114f905c8542b1634c40a0 843 Pfam PF13109 AsmA-like C-terminal region 621 835 1.5E-79 T 23-04-2016 CFF04554_RS04640 53e08ec65f114f905c8542b1634c40a0 843 Pfam PF13116 Protein of unknown function 204 482 3.0E-43 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 CFF04554_RS05155 8fe0d62967235b0a3fe3e2e2c71e2354 467 Pfam PF00939 Sodium:sulfate symporter transmembrane region 50 466 6.4E-38 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CFF04554_RS05155 8fe0d62967235b0a3fe3e2e2c71e2354 467 PANTHER PTHR10283:SF82 5 465 2.4E-68 T 23-04-2016 CFF04554_RS05155 8fe0d62967235b0a3fe3e2e2c71e2354 467 PANTHER PTHR10283 5 465 2.4E-68 T 23-04-2016 CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 Pfam PF13361 UvrD-like helicase C-terminal domain 401 518 9.7E-10 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 Pfam PF13361 UvrD-like helicase C-terminal domain 589 697 2.9E-12 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 394 5.1E-49 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 SUPERFAMILY SSF52540 95 151 1.35E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 SUPERFAMILY SSF52540 276 633 1.35E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 SUPERFAMILY SSF52540 4 59 1.35E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 SUPERFAMILY SSF52540 676 702 1.35E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 Gene3D G3DSA:3.40.50.300 7 55 2.0E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 Gene3D G3DSA:3.40.50.300 103 168 2.0E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 Gene3D G3DSA:3.40.50.300 286 397 2.0E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 PANTHER PTHR11070 95 178 1.5E-70 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 PANTHER PTHR11070 675 696 1.5E-70 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 PANTHER PTHR11070 251 642 1.5E-70 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 PANTHER PTHR11070 4 68 1.5E-70 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 Gene3D G3DSA:3.40.50.300 602 626 2.9E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 Gene3D G3DSA:3.40.50.300 661 701 2.9E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 cac662df6c10402463ed799cec29dde0 921 Gene3D G3DSA:3.40.50.300 404 513 2.9E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07720 a61c318d8b2d21b83a33d1a182c5b237 190 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 133 2.2E-11 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CFF04554_RS07720 a61c318d8b2d21b83a33d1a182c5b237 190 Gene3D G3DSA:3.10.50.40 119 135 1.1E-13 T 23-04-2016 CFF04554_RS07720 a61c318d8b2d21b83a33d1a182c5b237 190 Gene3D G3DSA:3.10.50.40 3 66 1.1E-13 T 23-04-2016 CFF04554_RS07720 a61c318d8b2d21b83a33d1a182c5b237 190 PANTHER PTHR10516 4 80 8.4E-18 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type CFF04554_RS07720 a61c318d8b2d21b83a33d1a182c5b237 190 PANTHER PTHR10516 126 190 8.4E-18 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type CFF04554_RS07720 a61c318d8b2d21b83a33d1a182c5b237 190 PANTHER PTHR10516:SF316 4 80 8.4E-18 T 23-04-2016 CFF04554_RS07720 a61c318d8b2d21b83a33d1a182c5b237 190 PANTHER PTHR10516:SF316 126 190 8.4E-18 T 23-04-2016 CFF04554_RS07720 a61c318d8b2d21b83a33d1a182c5b237 190 SUPERFAMILY SSF54534 3 135 1.53E-28 T 23-04-2016 CFF04554_RS02855 eace92471ca792761778db08dbedf627 171 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 22 95 1.1E-6 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CFF04554_RS02855 eace92471ca792761778db08dbedf627 171 SUPERFAMILY SSF89392 22 169 2.43E-19 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX CFF04554_RS02855 eace92471ca792761778db08dbedf627 171 Gene3D G3DSA:2.50.20.10 22 169 1.8E-15 T 23-04-2016 CFF04554_RS05315 1f27d21de8e8739c30498b2a565c9fc6 282 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 1 282 44.321 T 23-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 CFF04554_RS05315 1f27d21de8e8739c30498b2a565c9fc6 282 PANTHER PTHR10108:SF847 22 250 8.1E-44 T 23-04-2016 CFF04554_RS05315 1f27d21de8e8739c30498b2a565c9fc6 282 Gene3D G3DSA:3.40.50.150 77 240 3.5E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05315 1f27d21de8e8739c30498b2a565c9fc6 282 PANTHER PTHR10108 22 250 8.1E-44 T 23-04-2016 CFF04554_RS05315 1f27d21de8e8739c30498b2a565c9fc6 282 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 16 278 2.7E-90 T 23-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 CFF04554_RS05315 1f27d21de8e8739c30498b2a565c9fc6 282 SUPERFAMILY SSF53335 77 261 3.34E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05315 1f27d21de8e8739c30498b2a565c9fc6 282 Pfam PF08003 Protein of unknown function (DUF1698) 14 279 3.5E-81 T 23-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 105 117 2.9E-17 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 2.9E-17 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 218 237 2.9E-17 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 Gene3D G3DSA:2.10.109.10 218 265 3.2E-45 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 Gene3D G3DSA:2.10.109.10 26 115 3.2E-45 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 PANTHER PTHR12383:SF27 19 60 1.3E-51 T 23-04-2016 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 PANTHER PTHR12383:SF27 84 151 1.3E-51 T 23-04-2016 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 PANTHER PTHR12383:SF27 198 283 1.3E-51 T 23-04-2016 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 PANTHER PTHR12383 19 60 1.3E-51 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 PANTHER PTHR12383 84 151 1.3E-51 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 PANTHER PTHR12383 198 283 1.3E-51 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 SUPERFAMILY SSF51306 27 271 3.66E-54 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 Pfam PF00717 Peptidase S24-like 35 120 2.8E-16 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 258 3.4E-37 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CFF04554_RS06055 91e9a26adea20c793adfec09b71af562 285 ProSitePatterns PS00761 Signal peptidases I signature 3. 223 236 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 74 1.1E-11 T 23-04-2016 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 1.4E-13 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 SUPERFAMILY SSF54292 1 73 6.21E-17 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 Gene3D G3DSA:3.10.20.30 2 54 1.8E-5 T 23-04-2016 IPR012675 Beta-grasp domain CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 PANTHER PTHR11615:SF38 3 287 1.1E-71 T 23-04-2016 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 Gene3D G3DSA:2.20.25.90 225 271 4.4E-6 T 23-04-2016 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 SMART SM00929 83 123 6.0E-15 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 147 157 - T 23-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 SUPERFAMILY SSF54862 75 211 3.43E-28 T 23-04-2016 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 SUPERFAMILY SSF53706 215 328 1.13E-12 T 23-04-2016 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 SMART SM00926 217 276 9.7E-6 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 Gene3D G3DSA:3.30.70.20 195 224 6.9E-6 T 23-04-2016 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 Gene3D G3DSA:3.30.70.20 141 154 6.9E-6 T 23-04-2016 CFF04554_RS00810 96fb4c25ab0a8565ede628f085c49f2c 464 PANTHER PTHR11615 3 287 1.1E-71 T 23-04-2016 CFF04554_RS02055 960059964466c6611d1264b97e53819f 450 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 15 441 56.026 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CFF04554_RS02055 960059964466c6611d1264b97e53819f 450 Pfam PF01964 Radical SAM ThiC family 16 436 1.2E-196 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CFF04554_RS02055 960059964466c6611d1264b97e53819f 450 PANTHER PTHR30557:SF1 1 441 1.1E-286 T 23-04-2016 CFF04554_RS02055 960059964466c6611d1264b97e53819f 450 PANTHER PTHR30557 1 441 1.1E-286 T 23-04-2016 CFF04554_RS02055 960059964466c6611d1264b97e53819f 450 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 16 438 8.8E-200 T 23-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CFF04554_RS05255 a8a992117ccd33059d48f51a41d919f8 255 SMART SM00346 7 94 2.4E-5 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CFF04554_RS05255 a8a992117ccd33059d48f51a41d919f8 255 PANTHER PTHR30136:SF7 10 244 2.9E-50 T 23-04-2016 CFF04554_RS05255 a8a992117ccd33059d48f51a41d919f8 255 Gene3D G3DSA:3.30.450.40 75 247 1.5E-44 T 23-04-2016 IPR029016 GAF domain-like CFF04554_RS05255 a8a992117ccd33059d48f51a41d919f8 255 PANTHER PTHR30136 10 244 2.9E-50 T 23-04-2016 CFF04554_RS05255 a8a992117ccd33059d48f51a41d919f8 255 SUPERFAMILY SSF46785 10 77 6.64E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS05255 a8a992117ccd33059d48f51a41d919f8 255 Pfam PF01614 Bacterial transcriptional regulator 123 245 9.4E-28 T 23-04-2016 IPR014757 Transcription regulator IclR, C-terminal CFF04554_RS05255 a8a992117ccd33059d48f51a41d919f8 255 Gene3D G3DSA:1.10.10.10 10 74 3.6E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS05255 a8a992117ccd33059d48f51a41d919f8 255 Pfam PF09339 IclR helix-turn-helix domain 11 56 2.9E-6 T 23-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CFF04554_RS05255 a8a992117ccd33059d48f51a41d919f8 255 SUPERFAMILY SSF55781 69 245 1.18E-38 T 23-04-2016 IPR029016 GAF domain-like CFF04554_RS05625 f27247e7343705940f1b542b09546c44 245 Pfam PF14550 Putative phage serine protease XkdF 40 157 1.1E-33 T 23-04-2016 IPR027924 Phage-like element PBSX protein, XkdF CFF04554_RS08950 5542e8a08cb0a5fa2baf8b8ee93d38e0 202 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 202 23.442 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS08950 5542e8a08cb0a5fa2baf8b8ee93d38e0 202 PANTHER PTHR19278 9 146 7.9E-20 T 23-04-2016 CFF04554_RS08950 5542e8a08cb0a5fa2baf8b8ee93d38e0 202 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 2 200 3.2E-76 T 23-04-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS08950 5542e8a08cb0a5fa2baf8b8ee93d38e0 202 Gene3D G3DSA:3.40.50.2020 5 200 5.3E-37 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS08950 5542e8a08cb0a5fa2baf8b8ee93d38e0 202 SUPERFAMILY SSF53271 9 186 1.21E-33 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS08950 5542e8a08cb0a5fa2baf8b8ee93d38e0 202 Pfam PF00156 Phosphoribosyl transferase domain 34 146 1.8E-7 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CFF04554_RS08880 f055ab81bdcac60f13402b3f2b469020 323 SMART SM01060 17 300 0.0036 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS08880 f055ab81bdcac60f13402b3f2b469020 323 PANTHER PTHR11465 52 322 6.1E-30 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS08880 f055ab81bdcac60f13402b3f2b469020 323 PIRSF PIRSF000296 1 323 1.2E-78 T 23-04-2016 IPR024168 Catalase, SrpA-type, predicted CFF04554_RS08880 f055ab81bdcac60f13402b3f2b469020 323 Gene3D G3DSA:2.40.180.10 30 323 3.2E-56 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS08880 f055ab81bdcac60f13402b3f2b469020 323 Pfam PF00199 Catalase 44 249 1.9E-16 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS08880 f055ab81bdcac60f13402b3f2b469020 323 SUPERFAMILY SSF56634 40 322 7.07E-62 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CFF04554_RS08880 f055ab81bdcac60f13402b3f2b469020 323 PANTHER PTHR11465:SF16 52 322 6.1E-30 T 23-04-2016 CFF04554_RS07060 f4853e8360addbc07a418ffd7068e355 356 PANTHER PTHR12526 5 353 2.8E-31 T 23-04-2016 CFF04554_RS07060 f4853e8360addbc07a418ffd7068e355 356 PANTHER PTHR12526:SF374 5 353 2.8E-31 T 23-04-2016 CFF04554_RS07060 f4853e8360addbc07a418ffd7068e355 356 Gene3D G3DSA:3.40.50.2000 181 331 8.5E-18 T 23-04-2016 CFF04554_RS07060 f4853e8360addbc07a418ffd7068e355 356 SUPERFAMILY SSF53756 13 353 5.76E-53 T 23-04-2016 CFF04554_RS07060 f4853e8360addbc07a418ffd7068e355 356 Pfam PF00534 Glycosyl transferases group 1 172 332 2.7E-36 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.6E-47 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 402 8.6E-47 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 8.6E-47 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 429 8.6E-47 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 125 134 8.6E-47 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 8.6E-47 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 324 345 8.6E-47 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 8.6E-47 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 8.6E-47 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PANTHER PTHR22912:SF145 2 438 1.6E-158 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 329 433 1.2E-22 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 1.1E-24 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 1.1E-24 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 122 140 1.1E-24 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 1.1E-24 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.1E-24 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PIRSF PIRSF000350 1 434 9.2E-81 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 Gene3D G3DSA:3.50.50.60 2 124 4.1E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 PANTHER PTHR22912 2 438 1.6E-158 T 23-04-2016 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 Gene3D G3DSA:3.50.50.60 125 314 5.6E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 299 2.0E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 SUPERFAMILY SSF51905 2 300 1.55E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 SUPERFAMILY SSF55424 324 435 3.44E-25 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CFF04554_RS06970 a095d18631f556c2b52ee93cc31b7084 438 Gene3D G3DSA:3.30.390.30 315 436 2.9E-28 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CFF04554_RS08865 a0ef6c1d10dad601679bad643471d33a 258 PANTHER PTHR24220:SF73 4 253 1.6E-85 T 23-04-2016 CFF04554_RS08865 a0ef6c1d10dad601679bad643471d33a 258 SMART SM00382 27 216 1.1E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS08865 a0ef6c1d10dad601679bad643471d33a 258 PANTHER PTHR24220 4 253 1.6E-85 T 23-04-2016 CFF04554_RS08865 a0ef6c1d10dad601679bad643471d33a 258 Gene3D G3DSA:3.40.50.300 2 239 4.4E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08865 a0ef6c1d10dad601679bad643471d33a 258 Pfam PF00005 ABC transporter 18 168 9.6E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS08865 a0ef6c1d10dad601679bad643471d33a 258 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS08865 a0ef6c1d10dad601679bad643471d33a 258 SUPERFAMILY SSF52540 2 230 5.54E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 SUPERFAMILY SSF51735 2 126 4.25E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 PANTHER PTHR30525 1 356 2.8E-86 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 SUPERFAMILY SSF55347 117 243 8.5E-41 T 23-04-2016 CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 Pfam PF13288 DXP reductoisomerase C-terminal domain 243 355 1.8E-24 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 123 8.4E-20 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 360 35.34 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 PIRSF PIRSF006205 1 360 2.3E-101 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 SUPERFAMILY SSF69055 271 358 1.44E-19 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 Gene3D G3DSA:3.40.50.720 2 127 1.2E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 PANTHER PTHR30525:SF0 1 356 2.8E-86 T 23-04-2016 CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 Gene3D G3DSA:1.10.1740.10 282 358 4.4E-16 T 23-04-2016 CFF04554_RS01045 7482f5211a9264995f803e998b288a89 360 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 131 212 4.2E-31 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CFF04554_RS04615 65c7775a6ab9d2544bde03b67a947098 175 Pfam PF03748 Flagellar basal body-associated protein FliL 80 175 7.3E-28 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CFF04554_RS04615 65c7775a6ab9d2544bde03b67a947098 175 PANTHER PTHR35091:SF2 1 175 2.0E-35 T 23-04-2016 CFF04554_RS04615 65c7775a6ab9d2544bde03b67a947098 175 PANTHER PTHR35091 1 175 2.0E-35 T 23-04-2016 CFF04554_RS04670 25ded9d8e220af376c17db5269fb3088 140 Hamap MF_00476 Putative nickel-responsive regulator [nikR]. 7 137 26.855 T 23-04-2016 IPR022988 Nickel-responsive transcriptional regulator NikR GO:0003677|GO:0006355|GO:0010045|GO:0016151 CFF04554_RS04670 25ded9d8e220af376c17db5269fb3088 140 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 46 6.8E-8 T 23-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CFF04554_RS04670 25ded9d8e220af376c17db5269fb3088 140 Gene3D G3DSA:1.10.1220.10 8 51 1.4E-17 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CFF04554_RS04670 25ded9d8e220af376c17db5269fb3088 140 Pfam PF08753 NikR C terminal nickel binding domain 59 133 1.5E-29 T 23-04-2016 IPR014864 Transcription factor, NikR, nickel binding C-terminal CFF04554_RS04670 25ded9d8e220af376c17db5269fb3088 140 SUPERFAMILY SSF47598 6 53 1.04E-12 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 CFF04554_RS04670 25ded9d8e220af376c17db5269fb3088 140 PANTHER PTHR34719 4 133 8.2E-43 T 23-04-2016 CFF04554_RS04670 25ded9d8e220af376c17db5269fb3088 140 PANTHER PTHR34719:SF2 4 133 8.2E-43 T 23-04-2016 CFF04554_RS04670 25ded9d8e220af376c17db5269fb3088 140 Gene3D G3DSA:3.30.70.1150 55 136 6.2E-32 T 23-04-2016 CFF04554_RS04670 25ded9d8e220af376c17db5269fb3088 140 SUPERFAMILY SSF55021 57 135 1.03E-23 T 23-04-2016 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 SMART SM01004 1 321 2.2E-223 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 SUPERFAMILY SSF51569 2 323 6.3E-138 T 23-04-2016 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 PANTHER PTHR11458 4 325 9.5E-177 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 319 1.0E-143 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 Gene3D G3DSA:3.20.20.70 2 324 9.2E-146 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 PIRSF PIRSF001415 1 324 2.9E-145 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 1.1E-56 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 1.1E-56 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 1.1E-56 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 1.1E-56 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 1.1E-56 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 1.1E-56 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS07995 d65f06f074ac85d58e3746db1da3fea1 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS08840 165c3aefc441a0d37a246a4640d41044 394 Pfam PF06965 Na+/H+ antiporter 1 6 378 3.8E-144 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CFF04554_RS08840 165c3aefc441a0d37a246a4640d41044 394 PANTHER PTHR30341 6 392 3.0E-157 T 23-04-2016 CFF04554_RS08840 165c3aefc441a0d37a246a4640d41044 394 PANTHER PTHR30341:SF0 6 392 3.0E-157 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CFF04554_RS08840 165c3aefc441a0d37a246a4640d41044 394 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 387 22.204 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CFF04554_RS08840 165c3aefc441a0d37a246a4640d41044 394 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 378 4.4E-136 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CFF04554_RS08840 165c3aefc441a0d37a246a4640d41044 394 Gene3D G3DSA:1.20.1530.10 6 383 7.1E-148 T 23-04-2016 IPR023171 Na/H antiporter domain CFF04554_RS06100 c0f7ceef9d4a383afc33030adf0ef35c 602 Gene3D G3DSA:3.40.710.10 239 589 2.9E-91 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS06100 c0f7ceef9d4a383afc33030adf0ef35c 602 SUPERFAMILY SSF56601 235 589 2.91E-83 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS06100 c0f7ceef9d4a383afc33030adf0ef35c 602 SUPERFAMILY SSF56519 38 232 1.96E-33 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CFF04554_RS06100 c0f7ceef9d4a383afc33030adf0ef35c 602 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 2 588 5.2E-173 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 CFF04554_RS06100 c0f7ceef9d4a383afc33030adf0ef35c 602 Gene3D G3DSA:3.90.1310.10 140 238 9.7E-23 T 23-04-2016 CFF04554_RS06100 c0f7ceef9d4a383afc33030adf0ef35c 602 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 583 1.6E-60 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CFF04554_RS06100 c0f7ceef9d4a383afc33030adf0ef35c 602 PANTHER PTHR30627:SF2 1 588 7.1E-148 T 23-04-2016 CFF04554_RS06100 c0f7ceef9d4a383afc33030adf0ef35c 602 PANTHER PTHR30627 1 588 7.1E-148 T 23-04-2016 CFF04554_RS06100 c0f7ceef9d4a383afc33030adf0ef35c 602 Pfam PF03717 Penicillin-binding Protein dimerisation domain 47 219 2.5E-29 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 PRINTS PR01703 Manganese superoxide dismutase signature 62 75 5.8E-15 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 PRINTS PR01703 Manganese superoxide dismutase signature 148 160 5.8E-15 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 PRINTS PR01703 Manganese superoxide dismutase signature 110 118 5.8E-15 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 PRINTS PR01703 Manganese superoxide dismutase signature 24 37 5.8E-15 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 PANTHER PTHR11404:SF8 2 202 5.3E-75 T 23-04-2016 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 Gene3D G3DSA:1.10.287.990 17 78 5.1E-23 T 23-04-2016 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 PIRSF PIRSF000349 1 192 1.5E-62 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 SUPERFAMILY SSF46609 10 79 1.02E-24 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 78 1.1E-21 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 PANTHER PTHR11404 2 202 5.3E-75 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 150 157 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 SUPERFAMILY SSF54719 83 190 6.42E-37 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS00155 0d684231949588a4669576354c4d68cc 216 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 87 182 1.5E-30 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 Pfam PF00849 RNA pseudouridylate synthase 62 204 2.0E-10 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 Pfam PF01479 S4 domain 1 47 1.4E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 PANTHER PTHR21600:SF2 180 250 2.5E-49 T 23-04-2016 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 PANTHER PTHR21600:SF2 1 152 2.5E-49 T 23-04-2016 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 PANTHER PTHR21600 180 250 2.5E-49 T 23-04-2016 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 PANTHER PTHR21600 1 152 2.5E-49 T 23-04-2016 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 SMART SM00363 1 59 4.1E-11 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 236 4.1E-39 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 SUPERFAMILY SSF55174 1 55 2.35E-13 T 23-04-2016 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 Gene3D G3DSA:3.10.290.10 1 54 1.2E-18 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CFF04554_RS09065 5fb55e345e72397ec4e4ca92335717d4 254 SUPERFAMILY SSF55120 58 251 1.8E-29 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 Gene3D G3DSA:3.40.50.1980 13 168 3.6E-49 T 23-04-2016 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 Pfam PF01297 Zinc-uptake complex component A periplasmic 24 269 1.3E-60 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PANTHER PTHR30477:SF12 4 271 4.2E-102 T 23-04-2016 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 Gene3D G3DSA:3.40.50.1980 169 274 1.3E-26 T 23-04-2016 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 SUPERFAMILY SSF53807 18 275 2.4E-76 T 23-04-2016 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PANTHER PTHR30477 4 271 4.2E-102 T 23-04-2016 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PRINTS PR00690 Adhesin family signature 52 65 1.4E-29 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PRINTS PR00690 Adhesin family signature 65 82 1.4E-29 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PRINTS PR00690 Adhesin family signature 175 196 1.4E-29 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PRINTS PR00690 Adhesin family signature 21 39 1.4E-29 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PRINTS PR00691 Adhesin B signature 21 42 1.3E-29 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PRINTS PR00691 Adhesin B signature 175 192 1.3E-29 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PRINTS PR00691 Adhesin B signature 65 84 1.3E-29 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PRINTS PR00691 Adhesin B signature 46 64 1.3E-29 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CFF04554_RS03625 f6e25afc0db2d81ef77932dc4a22375d 278 PRINTS PR00691 Adhesin B signature 201 219 1.3E-29 T 23-04-2016 IPR006129 Adhesin B GO:0007155 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 ProSitePatterns PS00180 Glutamine synthetase signature 1. 54 72 - T 23-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 Gene3D G3DSA:3.10.20.70 9 109 9.8E-35 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 263 278 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 10 473 4.5E-192 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 PANTHER PTHR20852 7 142 4.8E-217 T 23-04-2016 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 PANTHER PTHR20852 165 475 4.8E-217 T 23-04-2016 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 Pfam PF00120 Glutamine synthetase, catalytic domain 107 470 9.5E-127 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 98 4.2E-30 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 SUPERFAMILY SSF55931 107 474 9.12E-126 T 23-04-2016 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 PANTHER PTHR20852:SF15 7 142 4.8E-217 T 23-04-2016 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 PANTHER PTHR20852:SF15 165 475 4.8E-217 T 23-04-2016 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 Gene3D G3DSA:3.30.590.10 110 454 9.7E-123 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 SUPERFAMILY SSF54368 8 105 2.09E-33 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CFF04554_RS05220 8e185cc7b2ef4b096753e3de97acb3b4 475 SMART SM01230 106 384 2.6E-143 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 SUPERFAMILY SSF51726 6 389 1.83E-95 T 23-04-2016 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 308 5.1E-110 T 23-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 749 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 PANTHER PTHR30519 1 749 0.0 T 23-04-2016 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 424 745 8.9E-141 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 Gene3D G3DSA:3.20.20.210 4 384 3.2E-125 T 23-04-2016 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 751 33.177 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 Gene3D G3DSA:3.20.20.210 388 749 4.9E-120 T 23-04-2016 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 PIRSF PIRSF000382 1 751 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 PANTHER PTHR30519:SF0 1 749 0.0 T 23-04-2016 CFF04554_RS04395 c0d9cfa2430e5ad0ebf6326dc23ee345 751 SUPERFAMILY SSF51726 400 749 2.75E-109 T 23-04-2016 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5 415 5.8E-122 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 1 444 1.4E-127 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 3 438 2.0E-187 T 23-04-2016 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 SUPERFAMILY SSF143968 316 447 1.18E-34 T 23-04-2016 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 PANTHER PTHR30108 1 443 2.5E-123 T 23-04-2016 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 SUPERFAMILY SSF143968 496 582 1.44E-8 T 23-04-2016 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 Gene3D G3DSA:3.40.1670.10 330 443 4.8E-25 T 23-04-2016 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 Gene3D G3DSA:3.40.1670.10 463 571 3.0E-17 T 23-04-2016 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 PANTHER PTHR30108:SF1 1 443 2.5E-123 T 23-04-2016 CFF04554_RS02925 827e7adb4b612a1d4e839fd22da61159 600 SUPERFAMILY SSF50475 1 315 3.92E-99 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CFF04554_RS03775 c8fb62c2f118f8b0eb148270673bf9d9 387 PANTHER PTHR14359 1 384 8.1E-91 T 23-04-2016 CFF04554_RS03775 c8fb62c2f118f8b0eb148270673bf9d9 387 SUPERFAMILY SSF102645 171 386 1.57E-53 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CFF04554_RS03775 c8fb62c2f118f8b0eb148270673bf9d9 387 Gene3D G3DSA:3.40.50.1950 2 179 4.8E-52 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CFF04554_RS03775 c8fb62c2f118f8b0eb148270673bf9d9 387 Gene3D G3DSA:3.40.50.10300 182 386 2.6E-50 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CFF04554_RS03775 c8fb62c2f118f8b0eb148270673bf9d9 387 SUPERFAMILY SSF52507 2 176 2.62E-47 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CFF04554_RS03775 c8fb62c2f118f8b0eb148270673bf9d9 387 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 184 357 8.7E-47 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CFF04554_RS03775 c8fb62c2f118f8b0eb148270673bf9d9 387 PANTHER PTHR14359:SF20 1 384 8.1E-91 T 23-04-2016 CFF04554_RS03775 c8fb62c2f118f8b0eb148270673bf9d9 387 Pfam PF02441 Flavoprotein 5 129 1.0E-24 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CFF04554_RS03775 c8fb62c2f118f8b0eb148270673bf9d9 387 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 384 2.9E-101 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 CFF04554_RS03160 998128b3d2905dd2ef55170997a3a926 123 PANTHER PTHR35866:SF1 16 104 9.5E-13 T 23-04-2016 CFF04554_RS03160 998128b3d2905dd2ef55170997a3a926 123 Pfam PF03692 Putative zinc- or iron-chelating domain 15 117 3.0E-13 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein CFF04554_RS03160 998128b3d2905dd2ef55170997a3a926 123 PANTHER PTHR35866 16 104 9.5E-13 T 23-04-2016 CFF04554_RS04840 01bc5894763d2b0fd316bb41b59140b3 63 Gene3D G3DSA:2.30.170.40 2 61 3.1E-25 T 23-04-2016 CFF04554_RS04840 01bc5894763d2b0fd316bb41b59140b3 63 SUPERFAMILY SSF143800 1 61 5.49E-26 T 23-04-2016 CFF04554_RS04840 01bc5894763d2b0fd316bb41b59140b3 63 Pfam PF00830 Ribosomal L28 family 3 60 7.5E-25 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 CFF04554_RS04840 01bc5894763d2b0fd316bb41b59140b3 63 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.1E-25 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS04840 01bc5894763d2b0fd316bb41b59140b3 63 PANTHER PTHR13528 1 60 4.3E-17 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 CFF04554_RS04840 01bc5894763d2b0fd316bb41b59140b3 63 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 20.837 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS01600 3e0973a3b618e45278aab7bf379ea3f3 272 Gene3D G3DSA:3.40.1350.10 144 270 1.2E-4 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CFF04554_RS01600 3e0973a3b618e45278aab7bf379ea3f3 272 SUPERFAMILY SSF52980 55 222 2.95E-13 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CFF04554_RS01600 3e0973a3b618e45278aab7bf379ea3f3 272 PIRSF PIRSF016080 1 271 2.8E-86 T 23-04-2016 IPR021191 Restriction endonuclease, type II, DpmII GO:0003677|GO:0009036|GO:0009307 CFF04554_RS01600 3e0973a3b618e45278aab7bf379ea3f3 272 Pfam PF04556 DpnII restriction endonuclease 6 266 6.9E-89 T 23-04-2016 IPR007637 Restriction endonuclease, type II, DpmII-like GO:0003677|GO:0009036|GO:0009307 CFF04554_RS05835 b33b62d1c0623ca64e11418c73805c9a 642 ProSitePatterns PS01175 Ribonuclease II family signature. 498 522 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site CFF04554_RS05835 b33b62d1c0623ca64e11418c73805c9a 642 Pfam PF00773 RNB domain 215 530 1.3E-86 T 23-04-2016 CFF04554_RS05835 b33b62d1c0623ca64e11418c73805c9a 642 SUPERFAMILY SSF50249 176 572 3.36E-108 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05835 b33b62d1c0623ca64e11418c73805c9a 642 SMART SM00955 215 531 2.3E-127 T 23-04-2016 CFF04554_RS05835 b33b62d1c0623ca64e11418c73805c9a 642 PANTHER PTHR23355 165 593 4.9E-106 T 23-04-2016 CFF04554_RS05835 b33b62d1c0623ca64e11418c73805c9a 642 SUPERFAMILY SSF50249 34 109 4.8E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 3.7E-56 T 23-04-2016 CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PANTHER PTHR24322 155 187 1.1E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PANTHER PTHR24322 10 139 1.1E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.8E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.8E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.8E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 SUPERFAMILY SSF51735 5 247 1.55E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 Gene3D G3DSA:3.40.50.720 2 246 1.9E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 9.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.8E-40 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 9.9E-95 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0072 T 23-04-2016 CFF04554_RS06945 649e3e16df41d854e0a0f6c55105ecba 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CFF04554_RS00370 3dd5ec28c19082ade6674ad3ed292afd 270 PANTHER PTHR10953 78 194 1.4E-30 T 23-04-2016 CFF04554_RS00370 3dd5ec28c19082ade6674ad3ed292afd 270 Pfam PF00899 ThiF family 84 262 2.4E-31 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CFF04554_RS00370 3dd5ec28c19082ade6674ad3ed292afd 270 Gene3D G3DSA:3.40.50.720 84 265 1.9E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS00370 3dd5ec28c19082ade6674ad3ed292afd 270 Pfam PF14453 ThiS-like ubiquitin 7 61 9.9E-12 T 23-04-2016 IPR032726 ThiS-like ubiquitin domain CFF04554_RS00370 3dd5ec28c19082ade6674ad3ed292afd 270 SUPERFAMILY SSF69572 80 264 2.22E-42 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CFF04554_RS00370 3dd5ec28c19082ade6674ad3ed292afd 270 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 69 262 1.0E-75 T 23-04-2016 IPR012729 Thiamine biosynthesis protein ThiF CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 21 126 4.3E-33 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 PANTHER PTHR11938 23 447 2.4E-133 T 23-04-2016 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 SUPERFAMILY SSF51971 326 447 6.36E-10 T 23-04-2016 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 PANTHER PTHR11938:SF93 23 447 2.4E-133 T 23-04-2016 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 Gene3D G3DSA:1.10.1060.10 3 144 3.8E-35 T 23-04-2016 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 PRINTS PR00419 Adrenodoxin reductase family signature 166 179 3.7E-25 T 23-04-2016 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 PRINTS PR00419 Adrenodoxin reductase family signature 314 327 3.7E-25 T 23-04-2016 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 PRINTS PR00419 Adrenodoxin reductase family signature 280 294 3.7E-25 T 23-04-2016 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 PRINTS PR00419 Adrenodoxin reductase family signature 143 165 3.7E-25 T 23-04-2016 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 Gene3D G3DSA:3.50.50.60 231 385 1.3E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 Gene3D G3DSA:3.40.50.720 145 230 1.5E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 Gene3D G3DSA:3.40.50.720 389 450 1.5E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 SUPERFAMILY SSF51971 140 385 2.47E-58 T 23-04-2016 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 SUPERFAMILY SSF46548 5 152 1.46E-31 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 4 450 6.4E-148 T 23-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CFF04554_RS07565 d01583c6fca16b7d2eeb1426e9c9b1d8 452 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 142 438 1.4E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS04005 09d8a365670ee0f44dfea6f909c68427 213 Pfam PF13545 Crp-like helix-turn-helix domain 147 208 7.9E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CFF04554_RS04005 09d8a365670ee0f44dfea6f909c68427 213 SUPERFAMILY SSF46785 146 210 4.23E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS04005 09d8a365670ee0f44dfea6f909c68427 213 Pfam PF00027 Cyclic nucleotide-binding domain 27 108 3.6E-13 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CFF04554_RS04005 09d8a365670ee0f44dfea6f909c68427 213 PANTHER PTHR24567 1 213 1.0E-38 T 23-04-2016 CFF04554_RS04005 09d8a365670ee0f44dfea6f909c68427 213 SUPERFAMILY SSF51206 2 137 3.01E-32 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like CFF04554_RS04005 09d8a365670ee0f44dfea6f909c68427 213 Gene3D G3DSA:1.10.10.10 160 210 2.0E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS04005 09d8a365670ee0f44dfea6f909c68427 213 SMART SM00419 155 203 9.2E-4 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CFF04554_RS04005 09d8a365670ee0f44dfea6f909c68427 213 Gene3D G3DSA:2.60.120.10 4 136 6.3E-32 T 23-04-2016 IPR014710 RmlC-like jelly roll fold CFF04554_RS04005 09d8a365670ee0f44dfea6f909c68427 213 SMART SM00100 8 126 4.7E-10 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain CFF04554_RS07175 88beea87d76477540c86cd66cba2d679 314 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 134 288 1.5E-36 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CFF04554_RS07175 88beea87d76477540c86cd66cba2d679 314 Gene3D G3DSA:3.40.50.2000 136 308 3.2E-54 T 23-04-2016 CFF04554_RS07175 88beea87d76477540c86cd66cba2d679 314 PANTHER PTHR30160 1 305 1.6E-52 T 23-04-2016 CFF04554_RS07175 88beea87d76477540c86cd66cba2d679 314 PANTHER PTHR30160:SF7 1 305 1.6E-52 T 23-04-2016 CFF04554_RS07175 88beea87d76477540c86cd66cba2d679 314 Gene3D G3DSA:3.40.50.2000 1 107 2.7E-17 T 23-04-2016 CFF04554_RS07175 88beea87d76477540c86cd66cba2d679 314 SUPERFAMILY SSF53756 1 308 2.35E-75 T 23-04-2016 CFF04554_RS07175 88beea87d76477540c86cd66cba2d679 314 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 143 308 4.0E-42 T 23-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 CFF04554_RS02320 646a688ea59d132864bc99318286e061 524 Pfam PF13657 HipA N-terminal domain 81 169 2.8E-7 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 CFF04554_RS02320 646a688ea59d132864bc99318286e061 524 Pfam PF07804 HipA-like C-terminal domain 329 462 3.3E-17 T 23-04-2016 IPR012893 HipA-like, C-terminal CFF04554_RS02320 646a688ea59d132864bc99318286e061 524 PANTHER PTHR37419 69 513 1.5E-13 T 23-04-2016 CFF04554_RS02320 646a688ea59d132864bc99318286e061 524 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 81 171 1.6E-8 T 23-04-2016 IPR017508 HipA, N-terminal subdomain 1 CFF04554_RS02320 646a688ea59d132864bc99318286e061 524 Pfam PF07805 HipA-like N-terminal domain 233 320 3.7E-11 T 23-04-2016 IPR012894 HipA, N-terminal subdomain 2 CFF04554_RS01655 7bea00b2b2a489498e9658d76e7f4b9b 239 Gene3D G3DSA:3.60.21.10 181 226 7.8E-13 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS01655 7bea00b2b2a489498e9658d76e7f4b9b 239 Gene3D G3DSA:3.60.21.10 9 136 7.8E-13 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS01655 7bea00b2b2a489498e9658d76e7f4b9b 239 SUPERFAMILY SSF56300 9 126 7.89E-17 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS01655 7bea00b2b2a489498e9658d76e7f4b9b 239 SUPERFAMILY SSF56300 174 227 7.89E-17 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 SMART SM00671 120 155 3.5E-7 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 SMART SM00671 84 119 6.8E-10 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 SMART SM00671 10 47 70.0 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 SMART SM00671 48 83 4.8E-8 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 Pfam PF08238 Sel1 repeat 85 119 7.8E-7 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 Pfam PF08238 Sel1 repeat 20 47 4.5 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 Pfam PF08238 Sel1 repeat 122 154 2.4E-6 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 Pfam PF08238 Sel1 repeat 50 82 1.1E-4 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 SUPERFAMILY SSF81901 21 163 1.44E-38 T 23-04-2016 CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 Gene3D G3DSA:1.25.40.10 23 168 1.5E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS00090 4abdc5bf4a4cb240f1f3db2b7daff5e9 170 PANTHER PTHR11102 19 158 6.6E-33 T 23-04-2016 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 289 376 3.9E-17 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 PANTHER PTHR23135 1 427 6.6E-110 T 23-04-2016 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 3 427 1.8E-114 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 Gene3D G3DSA:3.40.1190.10 90 289 3.4E-37 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 Pfam PF01225 Mur ligase family, catalytic domain 3 99 3.8E-19 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 Gene3D G3DSA:3.90.190.20 290 430 8.3E-32 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 SUPERFAMILY SSF53244 287 428 3.43E-27 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 Pfam PF08245 Mur ligase middle domain 106 212 1.6E-7 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 Gene3D G3DSA:3.40.50.720 2 88 2.0E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 PANTHER PTHR23135:SF5 1 427 6.6E-110 T 23-04-2016 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 SUPERFAMILY SSF53623 88 286 1.98E-36 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS03050 9611f5d1e8a749fc49f0ff5ed22505c2 432 SUPERFAMILY SSF51984 1 88 7.85E-25 T 23-04-2016 CFF04554_RS08325 c1ea774ddfcfff8ddf5c1dc2787fae66 696 Gene3D G3DSA:2.40.170.20 154 696 5.7E-92 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS08325 c1ea774ddfcfff8ddf5c1dc2787fae66 696 Gene3D G3DSA:2.170.130.10 21 153 2.5E-34 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS08325 c1ea774ddfcfff8ddf5c1dc2787fae66 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 40 152 4.1E-23 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS08325 c1ea774ddfcfff8ddf5c1dc2787fae66 696 PANTHER PTHR32552:SF15 20 696 1.4E-70 T 23-04-2016 CFF04554_RS08325 c1ea774ddfcfff8ddf5c1dc2787fae66 696 SUPERFAMILY SSF56935 31 696 3.36E-113 T 23-04-2016 CFF04554_RS08325 c1ea774ddfcfff8ddf5c1dc2787fae66 696 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 679 696 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site CFF04554_RS08325 c1ea774ddfcfff8ddf5c1dc2787fae66 696 Pfam PF00593 TonB dependent receptor 424 693 9.7E-30 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS08325 c1ea774ddfcfff8ddf5c1dc2787fae66 696 PANTHER PTHR32552 20 696 1.4E-70 T 23-04-2016 CFF04554_RS00465 9f9c1dae538a263823636a3cf2f46a56 126 SUPERFAMILY SSF160214 33 125 1.44E-23 T 23-04-2016 IPR005186 FlaG protein CFF04554_RS00465 9f9c1dae538a263823636a3cf2f46a56 126 Gene3D G3DSA:3.30.160.170 32 122 1.5E-22 T 23-04-2016 IPR005186 FlaG protein CFF04554_RS00465 9f9c1dae538a263823636a3cf2f46a56 126 Pfam PF03646 FlaG protein 25 124 9.9E-24 T 23-04-2016 IPR005186 FlaG protein CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 Pfam PF01293 Phosphoenolpyruvate carboxykinase 15 476 1.2E-222 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 247 262 - T 23-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 3 523 1.9E-241 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 PIRSF PIRSF006294 1 525 9.8E-243 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 SUPERFAMILY SSF68923 4 209 2.27E-82 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 Gene3D G3DSA:3.90.228.20 332 522 4.0E-126 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 Gene3D G3DSA:3.90.228.20 211 272 4.0E-126 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 SUPERFAMILY SSF53795 211 523 7.46E-136 T 23-04-2016 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 PANTHER PTHR30031:SF0 12 525 0.0 T 23-04-2016 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 Gene3D G3DSA:3.40.449.10 15 208 2.1E-81 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 PANTHER PTHR30031 12 525 0.0 T 23-04-2016 CFF04554_RS06650 104199cb7ff91db918c00d34c3e54a6c 525 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 9 523 56.356 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 SMART SM00938 4 105 1.6E-54 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 Gene3D G3DSA:3.30.70.120 1 112 1.5E-44 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 PRINTS PR00340 P-II protein signature 2 17 5.8E-37 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 PRINTS PR00340 P-II protein signature 52 75 5.8E-37 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 PRINTS PR00340 P-II protein signature 23 41 5.8E-37 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 PRINTS PR00340 P-II protein signature 83 103 5.8E-37 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 SUPERFAMILY SSF54913 1 112 1.02E-41 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.8E-38 T 23-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 23-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CFF04554_RS02725 018050792d5341aa6dcf3edaa85a237f 112 PANTHER PTHR30115 1 112 1.3E-54 T 23-04-2016 CFF04554_RS01305 0a33b6fc3e8c069a347d6eed5c7fec9b 352 Pfam PF12698 ABC-2 family transporter protein 21 343 1.5E-38 T 23-04-2016 CFF04554_RS01305 0a33b6fc3e8c069a347d6eed5c7fec9b 352 PANTHER PTHR30294:SF12 2 348 5.2E-74 T 23-04-2016 CFF04554_RS01305 0a33b6fc3e8c069a347d6eed5c7fec9b 352 PANTHER PTHR30294 2 348 5.2E-74 T 23-04-2016 CFF04554_RS01685 87e165953378b3a6acdc962292ecb905 398 PANTHER PTHR30486 24 393 1.1E-132 T 23-04-2016 CFF04554_RS01685 87e165953378b3a6acdc962292ecb905 398 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 209 223 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CFF04554_RS01685 87e165953378b3a6acdc962292ecb905 398 SMART SM00382 138 272 4.1E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS01685 87e165953378b3a6acdc962292ecb905 398 SUPERFAMILY SSF52540 16 355 3.06E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01685 87e165953378b3a6acdc962292ecb905 398 Gene3D G3DSA:3.40.50.300 115 358 3.7E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01685 87e165953378b3a6acdc962292ecb905 398 Pfam PF00437 Type II/IV secretion system protein 28 283 8.6E-46 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CFF04554_RS01685 87e165953378b3a6acdc962292ecb905 398 PANTHER PTHR30486:SF5 24 393 1.1E-132 T 23-04-2016 CFF04554_RS01685 87e165953378b3a6acdc962292ecb905 398 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 18 362 2.5E-128 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CFF04554_RS00245 a0611993c3faf18bff5890ae41ac6e93 118 SUPERFAMILY SSF53137 10 116 1.87E-38 T 23-04-2016 CFF04554_RS00245 a0611993c3faf18bff5890ae41ac6e93 118 PANTHER PTHR12899 13 118 2.8E-19 T 23-04-2016 CFF04554_RS00245 a0611993c3faf18bff5890ae41ac6e93 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 118 1.0E-35 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00245 a0611993c3faf18bff5890ae41ac6e93 118 Gene3D G3DSA:3.30.420.100 27 118 2.3E-24 T 23-04-2016 CFF04554_RS00245 a0611993c3faf18bff5890ae41ac6e93 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 11 118 5.6E-36 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00245 a0611993c3faf18bff5890ae41ac6e93 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 8 118 22.453 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 Gene3D G3DSA:3.30.70.600 2 99 3.7E-42 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 Pfam PF00338 Ribosomal protein S10p/S20e 5 98 1.5E-35 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 3.3E-19 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 PRINTS PR00971 Ribosomal protein S10 family signature 3 16 3.3E-19 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 3.3E-19 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 27 42 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 100 26.166 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 2 99 2.2E-41 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 SMART SM01403 5 99 2.9E-51 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 SUPERFAMILY SSF54999 3 98 2.22E-37 T 23-04-2016 IPR027486 Ribosomal protein S10 domain CFF04554_RS00160 fe4e96c20f5f3adc7e55333a65880d62 103 PANTHER PTHR11700 1 98 8.8E-47 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS03950 a622574eacb9eb1f2efa24ede025cd77 572 PANTHER PTHR24221 8 548 6.5E-200 T 23-04-2016 CFF04554_RS03950 a622574eacb9eb1f2efa24ede025cd77 572 SUPERFAMILY SSF90123 9 318 5.36E-84 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CFF04554_RS03950 a622574eacb9eb1f2efa24ede025cd77 572 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS03950 a622574eacb9eb1f2efa24ede025cd77 572 Pfam PF00005 ABC transporter 352 500 1.7E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS03950 a622574eacb9eb1f2efa24ede025cd77 572 Pfam PF00664 ABC transporter transmembrane region 24 292 2.4E-55 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CFF04554_RS03950 a622574eacb9eb1f2efa24ede025cd77 572 SUPERFAMILY SSF52540 330 566 8.81E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03950 a622574eacb9eb1f2efa24ede025cd77 572 Gene3D G3DSA:3.40.50.300 336 564 4.5E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03950 a622574eacb9eb1f2efa24ede025cd77 572 Gene3D G3DSA:1.20.1560.10 8 318 5.7E-87 T 23-04-2016 CFF04554_RS03950 a622574eacb9eb1f2efa24ede025cd77 572 SMART SM00382 361 546 2.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS04345 c4e3b32811d5d83edd733a14de7b4710 210 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 9.1E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS04345 c4e3b32811d5d83edd733a14de7b4710 210 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 21 7.9E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS04345 c4e3b32811d5d83edd733a14de7b4710 210 Gene3D G3DSA:3.30.700.10 5 64 1.1E-4 T 23-04-2016 CFF04554_RS04345 c4e3b32811d5d83edd733a14de7b4710 210 SUPERFAMILY SSF54523 5 69 1.65E-11 T 23-04-2016 CFF04554_RS08925 c21e4b315675de1e93bbef6a588636f8 361 Gene3D G3DSA:3.40.1090.10 7 116 5.1E-21 T 23-04-2016 CFF04554_RS08925 c21e4b315675de1e93bbef6a588636f8 361 Gene3D G3DSA:3.40.1090.10 134 352 7.2E-9 T 23-04-2016 CFF04554_RS08925 c21e4b315675de1e93bbef6a588636f8 361 Pfam PF01734 Patatin-like phospholipase 10 220 1.2E-16 T 23-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 CFF04554_RS08925 c21e4b315675de1e93bbef6a588636f8 361 SUPERFAMILY SSF52151 5 349 2.33E-32 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CFF04554_RS08700 0204f5e1bdc68393837b84f6874329cf 181 Pfam PF02659 Putative manganese efflux pump 28 175 4.5E-45 T 23-04-2016 IPR003810 Putative manganese efflux pump CFF04554_RS08700 0204f5e1bdc68393837b84f6874329cf 181 PANTHER PTHR35529 1 181 1.0E-46 T 23-04-2016 CFF04554_RS08700 0204f5e1bdc68393837b84f6874329cf 181 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 178 24.454 T 23-04-2016 IPR022929 Putative manganese efflux pump MntP CFF04554_RS06300 6d5f831c52595284dc6fb0d0f614ec39 185 Gene3D G3DSA:3.40.30.10 10 184 2.5E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS06300 6d5f831c52595284dc6fb0d0f614ec39 185 PANTHER PTHR12151 31 184 2.7E-27 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC CFF04554_RS06300 6d5f831c52595284dc6fb0d0f614ec39 185 SUPERFAMILY SSF52833 30 183 3.03E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS06300 6d5f831c52595284dc6fb0d0f614ec39 185 Pfam PF02630 SCO1/SenC 13 166 4.7E-25 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC CFF04554_RS06300 6d5f831c52595284dc6fb0d0f614ec39 185 PANTHER PTHR12151:SF0 31 184 2.7E-27 T 23-04-2016 CFF04554_RS00840 332505c0e903e3c5a1180cb8febfb1aa 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 1.1E-22 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00840 332505c0e903e3c5a1180cb8febfb1aa 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 1.1E-22 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00840 332505c0e903e3c5a1180cb8febfb1aa 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 1.1E-22 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00840 332505c0e903e3c5a1180cb8febfb1aa 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 325 344 1.1E-22 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00840 332505c0e903e3c5a1180cb8febfb1aa 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 131 150 1.1E-22 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00840 332505c0e903e3c5a1180cb8febfb1aa 495 Pfam PF00361 Proton-conducting membrane transporter 125 419 2.2E-51 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CFF04554_RS00840 332505c0e903e3c5a1180cb8febfb1aa 495 PANTHER PTHR22773 1 481 2.4E-123 T 23-04-2016 CFF04554_RS00840 332505c0e903e3c5a1180cb8febfb1aa 495 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 8 482 5.6E-121 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00840 332505c0e903e3c5a1180cb8febfb1aa 495 PANTHER PTHR22773:SF40 1 481 2.4E-123 T 23-04-2016 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 SMART SM01086 765 854 6.9E-32 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 316 1.8E-14 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Gene3D G3DSA:3.40.50.300 554 776 1.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Gene3D G3DSA:3.40.50.300 161 342 1.7E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 3.1E-40 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 3.1E-40 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 3.1E-40 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 3.1E-40 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 68 0.0044 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 146 2.4E-4 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 SMART SM00382 600 766 4.4E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 SMART SM00382 199 343 5.7E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Gene3D G3DSA:1.10.8.60 344 428 2.2E-33 T 23-04-2016 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 SUPERFAMILY SSF52540 550 849 6.5E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 845 9.7E-24 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 SUPERFAMILY SSF52540 159 548 2.03E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Gene3D G3DSA:1.10.8.60 777 855 5.8E-27 T 23-04-2016 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 SUPERFAMILY SSF81923 6 156 7.65E-25 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 PANTHER PTHR11638 1 855 0.0 T 23-04-2016 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Gene3D G3DSA:1.10.1780.10 5 148 4.3E-23 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 PANTHER PTHR11638:SF18 1 855 0.0 T 23-04-2016 CFF04554_RS04715 2bc5068765e389326004f182ef00343b 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 758 4.8E-53 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS03895 1b63741fbb45433803bd08f27f436909 354 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 24 349 6.4E-61 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CFF04554_RS03895 1b63741fbb45433803bd08f27f436909 354 SUPERFAMILY SSF51445 28 352 4.63E-69 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily CFF04554_RS03895 1b63741fbb45433803bd08f27f436909 354 PANTHER PTHR30480:SF5 24 352 2.5E-73 T 23-04-2016 CFF04554_RS03895 1b63741fbb45433803bd08f27f436909 354 PANTHER PTHR30480 24 352 2.5E-73 T 23-04-2016 CFF04554_RS03895 1b63741fbb45433803bd08f27f436909 354 Gene3D G3DSA:3.20.20.300 29 352 3.2E-81 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 Pfam PF05048 Periplasmic copper-binding protein (NosD) 130 361 1.0E-46 T 23-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 SUPERFAMILY SSF51126 18 385 9.17E-53 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 Gene3D G3DSA:2.160.20.10 19 327 1.7E-29 T 23-04-2016 IPR012334 Pectin lyase fold CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 SMART SM00710 152 172 2700.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 SMART SM00710 217 242 850.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 SMART SM00710 243 264 480.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 SMART SM00710 72 100 2100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 SMART SM00710 195 216 2700.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 SMART SM00710 270 291 1100.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 SMART SM00710 101 122 640.0 T 23-04-2016 IPR006626 Parallel beta-helix repeat CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 195 231 5.7E-6 T 23-04-2016 IPR022441 Parallel beta-helix repeat-2 CFF04554_RS02210 7768ad72a1a4cc94e5f6b1391aba2b57 404 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 19 399 1.1E-123 T 23-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD CFF04554_RS08790 e13c53380c73abe33fb40ad383561f7b 329 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 3 146 2.1E-5 T 23-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 CFF04554_RS08790 e13c53380c73abe33fb40ad383561f7b 329 Gene3D G3DSA:3.40.50.620 1 195 1.2E-33 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS08790 e13c53380c73abe33fb40ad383561f7b 329 PANTHER PTHR11933:SF6 1 234 2.0E-81 T 23-04-2016 CFF04554_RS08790 e13c53380c73abe33fb40ad383561f7b 329 PANTHER PTHR11933 1 234 2.0E-81 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CFF04554_RS08790 e13c53380c73abe33fb40ad383561f7b 329 SUPERFAMILY SSF52402 1 234 1.28E-27 T 23-04-2016 CFF04554_RS03610 111d855aad864e82357c2c6ec726e09e 569 PANTHER PTHR11804 173 566 5.9E-57 T 23-04-2016 CFF04554_RS03610 111d855aad864e82357c2c6ec726e09e 569 Gene3D G3DSA:3.40.390.10 323 400 4.3E-5 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CFF04554_RS03610 111d855aad864e82357c2c6ec726e09e 569 Pfam PF08439 Oligopeptidase F 100 166 1.5E-11 T 23-04-2016 IPR013647 Oligopeptidase F, N-terminal domain CFF04554_RS03610 111d855aad864e82357c2c6ec726e09e 569 SUPERFAMILY SSF55486 21 557 1.59E-97 T 23-04-2016 CFF04554_RS03610 111d855aad864e82357c2c6ec726e09e 569 Pfam PF01432 Peptidase family M3 184 554 5.4E-48 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 CFF04554_RS03610 111d855aad864e82357c2c6ec726e09e 569 PANTHER PTHR11804:SF8 173 566 5.9E-57 T 23-04-2016 CFF04554_RS06935 d817784d56c3ed58a8bc414d3fb80f4a 354 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 32 354 1.5E-117 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS06935 d817784d56c3ed58a8bc414d3fb80f4a 354 ProSitePatterns PS01347 MraY family signature 1. 63 75 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS06935 d817784d56c3ed58a8bc414d3fb80f4a 354 PANTHER PTHR22926:SF5 2 354 8.5E-115 T 23-04-2016 CFF04554_RS06935 d817784d56c3ed58a8bc414d3fb80f4a 354 PANTHER PTHR22926 2 354 8.5E-115 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS06935 d817784d56c3ed58a8bc414d3fb80f4a 354 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 63 75 7.2E-5 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS06935 d817784d56c3ed58a8bc414d3fb80f4a 354 Pfam PF00953 Glycosyl transferase family 4 96 278 7.7E-33 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS06935 d817784d56c3ed58a8bc414d3fb80f4a 354 ProSitePatterns PS01348 MraY family signature 2. 183 194 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS06935 d817784d56c3ed58a8bc414d3fb80f4a 354 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 20 352 22.532 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CFF04554_RS02380 77632f8bd4b030efa61575a354c45187 1269 SMART SM00869 1001 1258 3.2E-6 T 23-04-2016 IPR005546 Autotransporter beta-domain CFF04554_RS02380 77632f8bd4b030efa61575a354c45187 1269 SUPERFAMILY SSF103515 1009 1269 3.66E-18 T 23-04-2016 IPR005546 Autotransporter beta-domain CFF04554_RS02380 77632f8bd4b030efa61575a354c45187 1269 Gene3D G3DSA:2.40.128.130 976 1269 2.9E-24 T 23-04-2016 IPR005546 Autotransporter beta-domain CFF04554_RS08515 44fbf746decc9432ac5436a23ae280b6 195 Pfam PF00551 Formyl transferase 4 184 2.6E-39 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS08515 44fbf746decc9432ac5436a23ae280b6 195 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 190 25.425 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CFF04554_RS08515 44fbf746decc9432ac5436a23ae280b6 195 PANTHER PTHR10520:SF9 4 192 2.3E-48 T 23-04-2016 CFF04554_RS08515 44fbf746decc9432ac5436a23ae280b6 195 Gene3D G3DSA:3.40.50.170 4 191 1.9E-58 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS08515 44fbf746decc9432ac5436a23ae280b6 195 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 191 1.0E-50 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CFF04554_RS08515 44fbf746decc9432ac5436a23ae280b6 195 SUPERFAMILY SSF53328 4 190 8.9E-44 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS08515 44fbf746decc9432ac5436a23ae280b6 195 PANTHER PTHR10520 4 192 2.3E-48 T 23-04-2016 CFF04554_RS01145 064c997da557793f9cc66974d8145946 256 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 217 2.8E-17 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CFF04554_RS01145 064c997da557793f9cc66974d8145946 256 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site CFF04554_RS01145 064c997da557793f9cc66974d8145946 256 PANTHER PTHR30433 2 249 1.6E-69 T 23-04-2016 CFF04554_RS02190 f41762c697e62502c4bf2f6c5078a22f 599 PANTHER PTHR11649:SF36 145 251 1.5E-20 T 23-04-2016 CFF04554_RS02190 f41762c697e62502c4bf2f6c5078a22f 599 PANTHER PTHR11649:SF36 46 99 1.5E-20 T 23-04-2016 CFF04554_RS02190 f41762c697e62502c4bf2f6c5078a22f 599 Pfam PF00350 Dynamin family 60 199 2.8E-25 T 23-04-2016 IPR022812 Dynamin superfamily CFF04554_RS02190 f41762c697e62502c4bf2f6c5078a22f 599 PANTHER PTHR11649 145 251 1.5E-20 T 23-04-2016 CFF04554_RS02190 f41762c697e62502c4bf2f6c5078a22f 599 PANTHER PTHR11649 46 99 1.5E-20 T 23-04-2016 CFF04554_RS02190 f41762c697e62502c4bf2f6c5078a22f 599 SUPERFAMILY SSF52540 49 293 1.24E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02190 f41762c697e62502c4bf2f6c5078a22f 599 Gene3D G3DSA:3.40.50.300 50 264 1.6E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03115 b4e5ca2dbff58acf54059857188dbf51 247 Gene3D G3DSA:3.40.50.150 35 215 2.9E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03115 b4e5ca2dbff58acf54059857188dbf51 247 Pfam PF08241 Methyltransferase domain 59 147 2.8E-11 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CFF04554_RS03115 b4e5ca2dbff58acf54059857188dbf51 247 PANTHER PTHR10108:SF730 37 156 4.2E-13 T 23-04-2016 CFF04554_RS03115 b4e5ca2dbff58acf54059857188dbf51 247 PANTHER PTHR10108:SF730 192 228 4.2E-13 T 23-04-2016 CFF04554_RS03115 b4e5ca2dbff58acf54059857188dbf51 247 SUPERFAMILY SSF53335 21 216 5.78E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03115 b4e5ca2dbff58acf54059857188dbf51 247 PANTHER PTHR10108 37 156 4.2E-13 T 23-04-2016 CFF04554_RS03115 b4e5ca2dbff58acf54059857188dbf51 247 PANTHER PTHR10108 192 228 4.2E-13 T 23-04-2016 CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 2.5E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 2.5E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 2.5E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 2.5E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 PRINTS PR00127 Clp protease catalytic subunit P signature 20 35 2.5E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 23-04-2016 IPR033135 ClpP, histidine active site CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 4 193 1.1E-106 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 Pfam PF00574 Clp protease 14 193 1.5E-87 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 PANTHER PTHR10381 1 194 3.0E-129 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 PANTHER PTHR10381:SF22 1 194 3.0E-129 T 23-04-2016 CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 Gene3D G3DSA:3.90.226.10 5 193 7.2E-89 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 91 102 - T 23-04-2016 IPR018215 ClpP, Ser active site CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 194 43.654 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CFF04554_RS08540 e3d71b8a77509958eda840181a81d623 196 SUPERFAMILY SSF52096 12 192 3.98E-72 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 10 496 41.466 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 7 495 6.8E-191 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 Pfam PF01336 OB-fold nucleic acid binding domain 60 136 7.9E-13 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 2.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 2.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 2.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 2.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 PRINTS PR00982 Lysyl-tRNA synthetase signature 377 393 2.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 PANTHER PTHR22594:SF4 4 494 3.3E-223 T 23-04-2016 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 PANTHER PTHR22594 4 494 3.3E-223 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 Gene3D G3DSA:3.30.930.10 149 491 7.0E-111 T 23-04-2016 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 SUPERFAMILY SSF55681 154 493 1.78E-116 T 23-04-2016 CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 Gene3D G3DSA:2.40.50.140 5 146 3.4E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 SUPERFAMILY SSF50249 4 147 6.86E-35 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05900 a89de03ffb044d42129e2b0b32ff7e5f 504 Pfam PF00152 tRNA synthetases class II (D, K and N) 155 492 2.6E-79 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03505 0e9e72b5dc38664778e474ccaa24fed0 194 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 24 188 9.3E-35 T 23-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 CFF04554_RS03505 0e9e72b5dc38664778e474ccaa24fed0 194 SUPERFAMILY SSF55811 9 189 1.68E-29 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CFF04554_RS03505 0e9e72b5dc38664778e474ccaa24fed0 194 PANTHER PTHR11839 14 189 1.4E-32 T 23-04-2016 CFF04554_RS03505 0e9e72b5dc38664778e474ccaa24fed0 194 PANTHER PTHR11839:SF1 14 189 1.4E-32 T 23-04-2016 CFF04554_RS03505 0e9e72b5dc38664778e474ccaa24fed0 194 Gene3D G3DSA:3.90.79.10 6 191 3.2E-43 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 PANTHER PTHR11661 1 141 2.6E-57 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 SUPERFAMILY SSF46906 67 140 1.57E-22 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 Gene3D G3DSA:3.30.1550.10 2 71 2.5E-37 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 28.57 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 5.6E-20 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.0E-59 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 SMART SM00649 9 140 6.9E-75 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 Gene3D G3DSA:1.10.10.250 72 140 1.2E-24 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 3.0E-16 T 23-04-2016 CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 5.1E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CFF04554_RS06745 21abb76690033d5e23d2e74401ded719 141 SUPERFAMILY SSF54747 3 71 2.09E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 SUPERFAMILY SSF46785 646 707 3.67E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 SMART SM00382 389 573 0.0014 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 Gene3D G3DSA:3.40.50.300 328 609 4.4E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 SUPERFAMILY SSF52540 328 616 1.7E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 SMART SM00843 646 708 1.5E-24 T 23-04-2016 IPR018541 FtsK gamma domain CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 Pfam PF01580 FtsK/SpoIIIE family 494 544 1.5E-13 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 Pfam PF01580 FtsK/SpoIIIE family 354 491 1.2E-48 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 16 123 8.7E-9 T 23-04-2016 IPR025199 DNA translocase FtsK, 4TM region CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 PANTHER PTHR22683 153 707 1.3E-204 T 23-04-2016 CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 PANTHER PTHR22683:SF41 153 707 1.3E-204 T 23-04-2016 CFF04554_RS03440 a05421185f9a0f7adda9a8517641abe7 708 Pfam PF09397 Ftsk gamma domain 648 707 8.6E-23 T 23-04-2016 IPR018541 FtsK gamma domain CFF04554_RS08690 d3ebe09f70080b8e2844d273d89e9f0c 120 PANTHER PTHR34299:SF1 15 120 4.4E-24 T 23-04-2016 CFF04554_RS08690 d3ebe09f70080b8e2844d273d89e9f0c 120 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 68 79 - T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 CFF04554_RS08690 d3ebe09f70080b8e2844d273d89e9f0c 120 Pfam PF01219 Prokaryotic diacylglycerol kinase 14 114 1.9E-29 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 CFF04554_RS08690 d3ebe09f70080b8e2844d273d89e9f0c 120 PANTHER PTHR34299 15 120 4.4E-24 T 23-04-2016 CFF04554_RS08690 d3ebe09f70080b8e2844d273d89e9f0c 120 Gene3D G3DSA:1.10.3830.10 5 118 1.8E-35 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 723 843 6.5E-20 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 339 456 4.5E-9 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 601 721 2.3E-8 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SUPERFAMILY SSF55073 852 1012 1.02E-41 T 23-04-2016 IPR029787 Nucleotide cyclase CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Gene3D G3DSA:3.30.450.20 332 442 2.2E-7 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Pfam PF00990 Diguanylate cyclase, GGDEF domain 847 1006 7.6E-43 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Gene3D G3DSA:3.30.70.270 849 1014 4.5E-48 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Pfam PF00563 EAL domain 1030 1257 1.0E-41 T 23-04-2016 IPR001633 EAL domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SUPERFAMILY SSF55785 731 833 2.09E-26 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SMART SM00052 1016 1262 1.8E-27 T 23-04-2016 IPR001633 EAL domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SUPERFAMILY SSF55785 471 583 1.44E-8 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 PANTHER PTHR10799:SF710 1355 1374 3.0E-38 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 PANTHER PTHR10799:SF710 17 39 3.0E-38 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 PANTHER PTHR10799:SF710 675 699 3.0E-38 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 PANTHER PTHR10799:SF710 726 1099 3.0E-38 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SUPERFAMILY SSF55785 601 715 2.27E-11 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Gene3D G3DSA:3.30.450.20 717 830 3.7E-23 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Gene3D G3DSA:3.30.450.20 578 716 1.9E-14 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Pfam PF13426 PAS domain 733 834 5.4E-17 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Pfam PF13426 PAS domain 354 421 0.038 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SMART SM00086 794 836 5.5E-5 T 23-04-2016 IPR001610 PAC motif CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SMART SM00086 671 714 0.013 T 23-04-2016 IPR001610 PAC motif CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SUPERFAMILY SSF141868 1031 1272 5.23E-50 T 23-04-2016 IPR001633 EAL domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SMART SM00091 460 528 1.6 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SMART SM00091 722 788 2.2E-7 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SMART SM00091 594 664 68.0 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SMART SM00091 340 407 0.0034 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 PANTHER PTHR10799 1355 1374 3.0E-38 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 PANTHER PTHR10799 17 39 3.0E-38 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 PANTHER PTHR10799 675 699 3.0E-38 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 PANTHER PTHR10799 726 1099 3.0E-38 T 23-04-2016 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Gene3D G3DSA:3.20.20.450 1031 1268 3.4E-45 T 23-04-2016 IPR001633 EAL domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 843 1009 1.5E-39 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SMART SM00267 836 1010 5.7E-53 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Pfam PF08447 PAS fold 483 569 5.7E-7 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Pfam PF08447 PAS fold 619 702 7.0E-7 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 SUPERFAMILY SSF55785 328 448 1.83E-9 T 23-04-2016 IPR000014 PAS domain CFF04554_RS01845 696558d9e81aad895d229d685ae3f9ca 1375 Gene3D G3DSA:3.30.450.20 472 577 3.8E-10 T 23-04-2016 CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 Pfam PF14524 Wzt C-terminal domain 258 394 2.7E-33 T 23-04-2016 IPR029439 Wzt, C-terminal CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 Gene3D G3DSA:3.40.50.300 34 241 1.0E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 Pfam PF00005 ABC transporter 39 171 1.5E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 SUPERFAMILY SSF52540 34 237 3.8E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 SMART SM00382 48 219 3.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 PANTHER PTHR24220:SF117 36 235 3.6E-93 T 23-04-2016 CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 PANTHER PTHR24220:SF117 4 14 3.6E-93 T 23-04-2016 CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 PANTHER PTHR24220 36 235 3.6E-93 T 23-04-2016 CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 PANTHER PTHR24220 4 14 3.6E-93 T 23-04-2016 CFF04554_RS02435 42a3e8b4fd1e4a65b8444acace9d62d8 404 Gene3D G3DSA:2.70.50.60 248 394 2.2E-39 T 23-04-2016 CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 Pfam PF00563 EAL domain 404 630 2.8E-52 T 23-04-2016 IPR001633 EAL domain CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 Gene3D G3DSA:3.20.20.450 404 632 8.2E-60 T 23-04-2016 IPR001633 EAL domain CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 SMART SM00052 396 635 5.5E-44 T 23-04-2016 IPR001633 EAL domain CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 PANTHER PTHR33121 127 237 9.3E-43 T 23-04-2016 CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 PANTHER PTHR33121 350 630 9.3E-43 T 23-04-2016 CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 PANTHER PTHR33121:SF10 127 237 9.3E-43 T 23-04-2016 CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 PANTHER PTHR33121:SF10 350 630 9.3E-43 T 23-04-2016 CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 SMART SM00267 220 385 2.7E-6 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 SUPERFAMILY SSF141868 404 630 3.79E-61 T 23-04-2016 IPR001633 EAL domain CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 232 379 8.0E-11 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 SUPERFAMILY SSF55073 236 385 7.69E-14 T 23-04-2016 IPR029787 Nucleotide cyclase CFF04554_RS03095 995ab1076b12d88288d79d83ddb7566e 636 Gene3D G3DSA:3.30.70.270 233 386 1.9E-13 T 23-04-2016 CFF04554_RS08035 85b6ae61f986050048dd109dfc1232d0 322 Gene3D G3DSA:2.40.440.10 67 185 6.9E-9 T 23-04-2016 CFF04554_RS08035 85b6ae61f986050048dd109dfc1232d0 322 SUPERFAMILY SSF141523 66 186 5.36E-11 T 23-04-2016 CFF04554_RS08035 85b6ae61f986050048dd109dfc1232d0 322 Pfam PF03734 L,D-transpeptidase catalytic domain 66 179 3.3E-10 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 CFF04554_RS08035 85b6ae61f986050048dd109dfc1232d0 322 PANTHER PTHR36699 59 314 7.3E-20 T 23-04-2016 CFF04554_RS08035 85b6ae61f986050048dd109dfc1232d0 322 SUPERFAMILY SSF54427 212 321 2.92E-10 T 23-04-2016 IPR032710 NTF2-like domain CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 2 313 31.719 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 Gene3D G3DSA:2.160.10.10 96 195 4.7E-25 T 23-04-2016 CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 PANTHER PTHR22572:SF117 96 283 1.4E-51 T 23-04-2016 CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 Gene3D G3DSA:2.160.10.10 196 294 3.5E-20 T 23-04-2016 CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 SUPERFAMILY SSF51161 30 302 1.26E-76 T 23-04-2016 IPR011004 Trimeric LpxA-like CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 PANTHER PTHR22572 96 283 1.4E-51 T 23-04-2016 CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 5 311 1.3E-114 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 4.5E-8 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 211 244 7.4E-4 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 8.4E-11 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS04105 bece516656742b6b254ef996ee208420 315 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 18 83 1.1E-14 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 CFF04554_RS08695 0b528e800f5e338577af098f8bb225d4 87 SUPERFAMILY SSF46785 10 81 2.35E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS08695 0b528e800f5e338577af098f8bb225d4 87 Pfam PF05732 Firmicute plasmid replication protein (RepL) 5 82 7.0E-11 T 23-04-2016 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 CFF04554_RS08695 0b528e800f5e338577af098f8bb225d4 87 Gene3D G3DSA:1.10.10.10 25 82 1.5E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 164 7.3E-50 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 PIRSF PIRSF004749 1 171 1.8E-45 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 Pfam PF01327 Polypeptide deformylase 4 155 1.1E-46 T 23-04-2016 IPR023635 Peptide deformylase CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 Gene3D G3DSA:3.90.45.10 4 168 2.5E-55 T 23-04-2016 IPR023635 Peptide deformylase CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 PRINTS PR01576 Peptide deformylase signature 105 123 5.8E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 PRINTS PR01576 Peptide deformylase signature 32 61 5.8E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 PRINTS PR01576 Peptide deformylase signature 93 104 5.8E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 PRINTS PR01576 Peptide deformylase signature 124 153 5.8E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 Hamap MF_00163 Peptide deformylase [def]. 1 166 27.097 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 PANTHER PTHR10458 1 171 3.0E-52 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CFF04554_RS08530 01a609f87f488d821d2c859f8aa6f3fa 172 SUPERFAMILY SSF56420 1 168 1.57E-53 T 23-04-2016 IPR023635 Peptide deformylase CFF04554_RS08935 cae0d342d1970db8051f1d914136690c 296 SUPERFAMILY SSF103481 206 294 8.5E-6 T 23-04-2016 CFF04554_RS08935 cae0d342d1970db8051f1d914136690c 296 PANTHER PTHR22911:SF23 1 293 6.9E-46 T 23-04-2016 CFF04554_RS08935 cae0d342d1970db8051f1d914136690c 296 SUPERFAMILY SSF103481 44 150 2.22E-10 T 23-04-2016 CFF04554_RS08935 cae0d342d1970db8051f1d914136690c 296 PANTHER PTHR22911 1 293 6.9E-46 T 23-04-2016 CFF04554_RS08935 cae0d342d1970db8051f1d914136690c 296 Pfam PF00892 EamA-like transporter family 160 293 1.6E-16 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CFF04554_RS08935 cae0d342d1970db8051f1d914136690c 296 Pfam PF00892 EamA-like transporter family 8 147 1.7E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CFF04554_RS06305 57c4c8b373ce1abd77bb4a418151973b 381 Pfam PF04740 LXG domain of WXG superfamily 249 339 5.0E-7 T 23-04-2016 IPR006829 LXG domain CFF04554_RS06305 57c4c8b373ce1abd77bb4a418151973b 381 SMART SM00283 125 380 1.3E-25 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS06305 57c4c8b373ce1abd77bb4a418151973b 381 PANTHER PTHR32089 72 379 9.3E-43 T 23-04-2016 CFF04554_RS06305 57c4c8b373ce1abd77bb4a418151973b 381 SUPERFAMILY SSF58104 74 379 6.28E-53 T 23-04-2016 CFF04554_RS06305 57c4c8b373ce1abd77bb4a418151973b 381 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 187 379 6.1E-36 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS06305 57c4c8b373ce1abd77bb4a418151973b 381 Gene3D G3DSA:1.10.287.950 137 344 1.8E-43 T 23-04-2016 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 Pfam PF00375 Sodium:dicarboxylate symporter family 14 404 1.0E-61 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 Gene3D G3DSA:1.10.3860.10 7 405 6.7E-79 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 4.4E-15 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 83 108 4.4E-15 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 12 32 4.4E-15 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 4.4E-15 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 4.4E-15 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 PANTHER PTHR11958 11 403 1.6E-184 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 SUPERFAMILY SSF118215 14 404 3.66E-88 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 PANTHER PTHR11958:SF68 11 403 1.6E-184 T 23-04-2016 CFF04554_RS03615 995e27c4b6cb217414fb7041ee12606d 407 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 2 407 34.475 T 23-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Pfam PF14492 Elongation Factor G, domain II 402 476 3.4E-35 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 112.207 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 SUPERFAMILY SSF54980 601 688 2.45E-32 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Gene3D G3DSA:3.30.230.10 482 600 7.9E-55 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Pfam PF03764 Elongation factor G, domain IV 477 595 1.4E-51 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Pfam PF00679 Elongation factor G C-terminus 598 684 7.5E-34 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Pfam PF03144 Elongation factor Tu domain 2 322 389 2.0E-13 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 SMART SM00838 598 685 8.2E-62 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 SUPERFAMILY SSF50447 264 402 1.01E-32 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Pfam PF00009 Elongation factor Tu GTP binding domain 10 280 9.5E-69 T 23-04-2016 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.3E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.3E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.3E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.3E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.3E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 SMART SM00889 478 596 3.2E-79 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Gene3D G3DSA:3.30.70.870 403 478 1.5E-39 T 23-04-2016 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 SUPERFAMILY SSF54211 477 596 9.61E-49 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Gene3D G3DSA:2.40.30.10 304 402 2.2E-34 T 23-04-2016 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 SUPERFAMILY SSF52540 7 280 2.57E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 180 4.3E-31 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 SUPERFAMILY SSF54980 402 479 3.56E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Gene3D G3DSA:3.30.70.240 601 688 2.6E-36 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 Gene3D G3DSA:3.40.50.300 7 285 1.5E-106 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PANTHER PTHR23115 1 177 0.0 T 23-04-2016 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PANTHER PTHR23115 301 689 0.0 T 23-04-2016 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PANTHER PTHR23115 254 282 0.0 T 23-04-2016 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PANTHER PTHR23115:SF66 1 177 0.0 T 23-04-2016 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PANTHER PTHR23115:SF66 301 689 0.0 T 23-04-2016 CFF04554_RS06705 95b6c25958c3814e0757a93e06ef8599 691 PANTHER PTHR23115:SF66 254 282 0.0 T 23-04-2016 CFF04554_RS08275 e4b15f2327625f88b533f81ffff1b088 521 Pfam PF13649 Methyltransferase domain 47 147 6.3E-10 T 23-04-2016 CFF04554_RS08275 e4b15f2327625f88b533f81ffff1b088 521 PANTHER PTHR10108:SF730 10 248 8.4E-21 T 23-04-2016 CFF04554_RS08275 e4b15f2327625f88b533f81ffff1b088 521 PANTHER PTHR10108 10 248 8.4E-21 T 23-04-2016 CFF04554_RS08275 e4b15f2327625f88b533f81ffff1b088 521 Gene3D G3DSA:3.40.50.150 6 185 7.0E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08275 e4b15f2327625f88b533f81ffff1b088 521 SUPERFAMILY SSF53335 38 160 1.04E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08275 e4b15f2327625f88b533f81ffff1b088 521 Pfam PF10119 Predicted methyltransferase regulatory domain 227 310 8.0E-22 T 23-04-2016 IPR018773 Methyltransferase regulatory domain, predicted CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 PANTHER PTHR13812 1 420 3.1E-75 T 23-04-2016 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 5 408 6.3E-109 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 PANTHER PTHR13812:SF18 1 420 3.1E-75 T 23-04-2016 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 174 301 4.0E-33 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 24.344 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 316 408 2.8E-17 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 SUPERFAMILY SSF69075 315 409 6.02E-8 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 SUPERFAMILY SSF69742 1 159 4.45E-37 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 155 4.5E-34 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 PIRSF PIRSF000445 1 420 2.6E-114 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 Gene3D G3DSA:3.40.50.720 164 306 3.1E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CFF04554_RS03460 9f4d301546230c93c9baf23196d4a19c 422 SUPERFAMILY SSF51735 163 309 3.28E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS00335 8106294067e6a0dd5be7d1c8d0e01e4d 358 Gene3D G3DSA:2.30.42.10 198 258 9.7E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS00335 8106294067e6a0dd5be7d1c8d0e01e4d 358 SUPERFAMILY SSF50156 283 349 8.81E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS00335 8106294067e6a0dd5be7d1c8d0e01e4d 358 SUPERFAMILY SSF50156 160 251 2.7E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS00335 8106294067e6a0dd5be7d1c8d0e01e4d 358 SMART SM00228 284 349 0.017 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS00335 8106294067e6a0dd5be7d1c8d0e01e4d 358 SMART SM00228 175 243 2.1 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS00335 8106294067e6a0dd5be7d1c8d0e01e4d 358 Gene3D G3DSA:2.30.42.10 282 349 6.4E-10 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS00335 8106294067e6a0dd5be7d1c8d0e01e4d 358 Pfam PF13180 PDZ domain 175 251 1.1E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS07955 9cc73a8ea2d166edfd03bf378a67ba5e 186 PANTHER PTHR11241 1 186 1.5E-73 T 23-04-2016 CFF04554_RS07955 9cc73a8ea2d166edfd03bf378a67ba5e 186 Pfam PF00692 dUTPase 78 179 1.5E-8 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CFF04554_RS07955 9cc73a8ea2d166edfd03bf378a67ba5e 186 SUPERFAMILY SSF51283 3 185 2.36E-51 T 23-04-2016 IPR029054 dUTPase-like CFF04554_RS07955 9cc73a8ea2d166edfd03bf378a67ba5e 186 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 29.367 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 CFF04554_RS07955 9cc73a8ea2d166edfd03bf378a67ba5e 186 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 184 5.3E-57 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 CFF04554_RS07955 9cc73a8ea2d166edfd03bf378a67ba5e 186 PANTHER PTHR11241:SF1 1 186 1.5E-73 T 23-04-2016 CFF04554_RS07955 9cc73a8ea2d166edfd03bf378a67ba5e 186 Gene3D G3DSA:2.70.40.10 3 185 1.5E-65 T 23-04-2016 IPR029054 dUTPase-like CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 3.3E-30 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 336 2.0E-137 T 23-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 Gene3D G3DSA:3.40.50.720 1 145 1.4E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 PIRSF PIRSF000148 3 340 1.1E-123 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 234 248 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 337 37.722 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 PANTHER PTHR10174:SF2 68 334 6.6E-75 T 23-04-2016 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 SUPERFAMILY SSF51735 3 159 7.59E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 Gene3D G3DSA:3.30.360.10 146 320 7.1E-80 T 23-04-2016 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 142 322 1.2E-59 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 SMART SM00859 5 122 2.5E-40 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 PANTHER PTHR10174 68 334 6.6E-75 T 23-04-2016 CFF04554_RS07440 e5615b1ad4773ac8fed708f8d4a16acf 344 SUPERFAMILY SSF55347 132 324 8.31E-78 T 23-04-2016 CFF04554_RS05455 cac039a85144a2890e1344a27ce87a83 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 3.3E-6 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS05455 cac039a85144a2890e1344a27ce87a83 259 PANTHER PTHR30193 1 245 3.0E-32 T 23-04-2016 CFF04554_RS05455 cac039a85144a2890e1344a27ce87a83 259 Gene3D G3DSA:1.10.3720.10 3 245 3.8E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS05455 cac039a85144a2890e1344a27ce87a83 259 PANTHER PTHR30193:SF20 1 245 3.0E-32 T 23-04-2016 CFF04554_RS05455 cac039a85144a2890e1344a27ce87a83 259 SUPERFAMILY SSF161098 13 246 1.83E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS08345 1eefa91109c668a70a1c219acff2193f 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 62 416 4.2E-86 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain CFF04554_RS08345 1eefa91109c668a70a1c219acff2193f 511 SUPERFAMILY SSF53850 18 497 2.53E-123 T 23-04-2016 CFF04554_RS08345 1eefa91109c668a70a1c219acff2193f 511 PANTHER PTHR30290 2 508 1.1E-124 T 23-04-2016 CFF04554_RS08345 1eefa91109c668a70a1c219acff2193f 511 PIRSF PIRSF002741 15 509 4.1E-127 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CFF04554_RS08345 1eefa91109c668a70a1c219acff2193f 511 PANTHER PTHR30290:SF27 2 508 1.1E-124 T 23-04-2016 CFF04554_RS08345 1eefa91109c668a70a1c219acff2193f 511 Gene3D G3DSA:3.10.105.10 274 475 8.5E-40 T 23-04-2016 CFF04554_RS08345 1eefa91109c668a70a1c219acff2193f 511 Gene3D G3DSA:3.40.190.10 176 273 6.1E-38 T 23-04-2016 CFF04554_RS08345 1eefa91109c668a70a1c219acff2193f 511 Gene3D G3DSA:3.90.76.10 44 175 1.5E-39 T 23-04-2016 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 321 4.3E-81 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 Gene3D G3DSA:3.40.50.620 2 199 1.7E-72 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 Pfam PF00579 tRNA synthetases class I (W and Y) 2 273 4.5E-56 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 322 34.711 T 23-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 65 84 1.5E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 1.5E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 191 201 1.5E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 1.5E-22 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 SUPERFAMILY SSF52374 2 321 3.9E-80 T 23-04-2016 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 PANTHER PTHR10055 2 323 4.5E-117 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 PANTHER PTHR10055:SF10 2 323 4.5E-117 T 23-04-2016 CFF04554_RS06850 fc5b21e433d8e65e94233bbff4859ec1 323 Gene3D G3DSA:1.10.240.10 200 288 9.7E-28 T 23-04-2016 CFF04554_RS00925 b4c246eba00f7b40feea891bf4b1ef3a 544 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 401 476 2.0E-31 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS00925 b4c246eba00f7b40feea891bf4b1ef3a 544 SUPERFAMILY SSF58104 224 255 3.27E-53 T 23-04-2016 CFF04554_RS00925 b4c246eba00f7b40feea891bf4b1ef3a 544 SUPERFAMILY SSF58104 344 543 3.27E-53 T 23-04-2016 CFF04554_RS00925 b4c246eba00f7b40feea891bf4b1ef3a 544 PANTHER PTHR32089:SF1 334 535 2.3E-42 T 23-04-2016 CFF04554_RS00925 b4c246eba00f7b40feea891bf4b1ef3a 544 PANTHER PTHR32089:SF1 170 235 2.3E-42 T 23-04-2016 CFF04554_RS00925 b4c246eba00f7b40feea891bf4b1ef3a 544 SMART SM00283 341 543 2.5E-32 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS00925 b4c246eba00f7b40feea891bf4b1ef3a 544 PANTHER PTHR32089 334 535 2.3E-42 T 23-04-2016 CFF04554_RS00925 b4c246eba00f7b40feea891bf4b1ef3a 544 PANTHER PTHR32089 170 235 2.3E-42 T 23-04-2016 CFF04554_RS00925 b4c246eba00f7b40feea891bf4b1ef3a 544 Gene3D G3DSA:1.10.287.950 345 540 4.2E-46 T 23-04-2016 CFF04554_RS04310 db60b8085c1316a9628e5d75df0a9a2f 205 Gene3D G3DSA:3.20.20.10 11 204 1.4E-57 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS04310 db60b8085c1316a9628e5d75df0a9a2f 205 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 13 205 5.5E-53 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CFF04554_RS04310 db60b8085c1316a9628e5d75df0a9a2f 205 PANTHER PTHR10146 14 203 7.4E-54 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CFF04554_RS04310 db60b8085c1316a9628e5d75df0a9a2f 205 SUPERFAMILY SSF51419 8 204 6.8E-58 T 23-04-2016 IPR029066 PLP-binding barrel CFF04554_RS04310 db60b8085c1316a9628e5d75df0a9a2f 205 PIRSF PIRSF004848 2 205 4.2E-57 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CFF04554_RS04310 db60b8085c1316a9628e5d75df0a9a2f 205 Pfam PF01168 Alanine racemase, N-terminal domain 7 204 7.9E-19 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CFF04554_RS04310 db60b8085c1316a9628e5d75df0a9a2f 205 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 60 74 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 30 281 1.0E-91 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 Gene3D G3DSA:1.20.120.140 2 41 1.8E-5 T 23-04-2016 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 PANTHER PTHR11564 1 281 4.2E-97 T 23-04-2016 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 256 269 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 SUPERFAMILY SSF52540 80 282 3.21E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 Gene3D G3DSA:3.40.50.300 93 283 3.8E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 SMART SM00962 82 283 1.6E-102 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 Pfam PF00448 SRP54-type protein, GTPase domain 83 281 2.5E-73 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 SUPERFAMILY SSF47364 1 51 5.63E-6 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 SMART SM00382 81 261 1.9E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 PANTHER PTHR11564:SF16 1 281 4.2E-97 T 23-04-2016 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 22 283 52.593 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CFF04554_RS02460 752a8d0d4e55b5d362bfed27af38474f 289 Gene3D G3DSA:1.20.120.140 42 92 4.4E-17 T 23-04-2016 CFF04554_RS00600 a4ae938c5a72dbf11bacb454e64b4212 373 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 365 1.1E-79 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CFF04554_RS00600 a4ae938c5a72dbf11bacb454e64b4212 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 65 285 7.0E-13 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFF04554_RS00600 a4ae938c5a72dbf11bacb454e64b4212 373 SUPERFAMILY SSF111369 52 289 3.14E-53 T 23-04-2016 CFF04554_RS00600 a4ae938c5a72dbf11bacb454e64b4212 373 PANTHER PTHR30158 7 366 2.9E-81 T 23-04-2016 CFF04554_RS00600 a4ae938c5a72dbf11bacb454e64b4212 373 Gene3D G3DSA:2.40.50.100 64 96 6.3E-16 T 23-04-2016 CFF04554_RS00600 a4ae938c5a72dbf11bacb454e64b4212 373 Gene3D G3DSA:2.40.50.100 171 200 6.3E-16 T 23-04-2016 CFF04554_RS03065 117d7ce25152693eaae946ec331b1a6d 247 SUPERFAMILY SSF52540 1 219 9.96E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03065 117d7ce25152693eaae946ec331b1a6d 247 SMART SM00382 26 207 1.1E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS03065 117d7ce25152693eaae946ec331b1a6d 247 PANTHER PTHR24220 3 212 1.7E-81 T 23-04-2016 CFF04554_RS03065 117d7ce25152693eaae946ec331b1a6d 247 Pfam PF00005 ABC transporter 17 160 2.3E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS03065 117d7ce25152693eaae946ec331b1a6d 247 Gene3D G3DSA:3.40.50.300 1 225 3.5E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03065 117d7ce25152693eaae946ec331b1a6d 247 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 Pfam PF00344 SecY translocase 62 400 1.4E-100 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 ProSitePatterns PS00755 Protein secY signature 1. 62 81 - T 23-04-2016 IPR030659 SecY conserved site CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 353 371 3.3E-86 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 9 27 3.3E-86 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 61 81 3.3E-86 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 167 190 3.3E-86 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 385 403 3.3E-86 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 141 166 3.3E-86 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 298 320 3.3E-86 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 259 278 3.3E-86 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 3.3E-86 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 411 3.0E-107 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PIRSF PIRSF004557 1 419 1.1E-120 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PANTHER PTHR10906 7 413 1.3E-151 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 ProSitePatterns PS00756 Protein secY signature 2. 160 177 - T 23-04-2016 IPR030659 SecY conserved site CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 PANTHER PTHR10906:SF2 7 413 1.3E-151 T 23-04-2016 CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 SUPERFAMILY SSF103491 3 407 2.09E-109 T 23-04-2016 IPR023201 SecY subunit domain CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 416 26.965 T 23-04-2016 IPR026593 Protein translocase subunit SecY CFF04554_RS00260 7a929eed54b3a22acd6336645be999c9 420 Gene3D G3DSA:1.10.3370.10 3 415 1.6E-135 T 23-04-2016 IPR023201 SecY subunit domain CFF04554_RS02720 ed78fca639ab1d210554eedb4fc753ab 427 PANTHER PTHR11730:SF17 24 425 4.5E-184 T 23-04-2016 CFF04554_RS02720 ed78fca639ab1d210554eedb4fc753ab 427 Pfam PF00909 Ammonium Transporter Family 32 424 3.2E-120 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CFF04554_RS02720 ed78fca639ab1d210554eedb4fc753ab 427 Gene3D G3DSA:1.10.3430.10 25 408 4.1E-139 T 23-04-2016 IPR029020 Ammonium/urea transporter CFF04554_RS02720 ed78fca639ab1d210554eedb4fc753ab 427 SUPERFAMILY SSF111352 26 408 1.57E-130 T 23-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CFF04554_RS02720 ed78fca639ab1d210554eedb4fc753ab 427 PANTHER PTHR11730 24 425 4.5E-184 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CFF04554_RS02720 ed78fca639ab1d210554eedb4fc753ab 427 TIGRFAM TIGR00836 amt: ammonium transporter 30 424 1.0E-134 T 23-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CFF04554_RS02720 ed78fca639ab1d210554eedb4fc753ab 427 ProSitePatterns PS01219 Ammonium transporters signature. 191 216 - T 23-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CFF04554_RS08850 ca37f6b1f7831f0cbf537c8283e38e3b 248 Gene3D G3DSA:3.20.180.10 2 76 3.0E-14 T 23-04-2016 IPR019595 Domain of unknown function DUF2470 CFF04554_RS08850 ca37f6b1f7831f0cbf537c8283e38e3b 248 SUPERFAMILY SSF50475 2 78 4.71E-8 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CFF04554_RS08850 ca37f6b1f7831f0cbf537c8283e38e3b 248 TIGRFAM TIGR04109 heme_ox_HugZ: heme oxygenase, HugZ family 6 245 3.0E-106 T 23-04-2016 IPR026324 Haem oxygenase, HugZ CFF04554_RS08850 ca37f6b1f7831f0cbf537c8283e38e3b 248 SUPERFAMILY SSF50475 92 235 7.33E-23 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CFF04554_RS08850 ca37f6b1f7831f0cbf537c8283e38e3b 248 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 95 164 1.1E-4 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CFF04554_RS08850 ca37f6b1f7831f0cbf537c8283e38e3b 248 Pfam PF10615 Protein of unknown function (DUF2470) 3 62 5.6E-12 T 23-04-2016 IPR019595 Domain of unknown function DUF2470 CFF04554_RS08850 ca37f6b1f7831f0cbf537c8283e38e3b 248 Gene3D G3DSA:2.30.110.10 95 225 1.4E-30 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 Gene3D G3DSA:3.40.720.10 295 483 1.0E-73 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 Gene3D G3DSA:3.40.720.10 3 76 1.0E-73 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 PANTHER PTHR31637:SF0 1 483 2.1E-206 T 23-04-2016 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 SUPERFAMILY SSF64158 76 289 2.75E-72 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 PIRSF PIRSF001492 1 487 4.6E-185 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 SUPERFAMILY SSF53649 3 76 4.58E-64 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 SUPERFAMILY SSF53649 291 483 4.58E-64 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 PANTHER PTHR31637 1 483 2.1E-206 T 23-04-2016 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 487 42.327 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 3 486 8.3E-192 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 Gene3D G3DSA:3.40.1450.10 77 291 3.6E-76 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 Pfam PF01676 Metalloenzyme superfamily 3 477 4.6E-69 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CFF04554_RS06940 bdec2840336f5dcdf1adaf322a60baf7 487 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 280 9.3E-68 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CFF04554_RS04470 3b7187971100d3c59cfb98c623ea9970 192 SUPERFAMILY SSF52540 1 191 2.21E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04470 3b7187971100d3c59cfb98c623ea9970 192 PANTHER PTHR10344:SF0 1 192 1.5E-24 T 23-04-2016 CFF04554_RS04470 3b7187971100d3c59cfb98c623ea9970 192 Gene3D G3DSA:3.40.50.300 1 192 1.0E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04470 3b7187971100d3c59cfb98c623ea9970 192 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 188 1.6E-33 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CFF04554_RS04470 3b7187971100d3c59cfb98c623ea9970 192 Pfam PF02223 Thymidylate kinase 5 188 8.4E-31 T 23-04-2016 CFF04554_RS04470 3b7187971100d3c59cfb98c623ea9970 192 Hamap MF_00165 Thymidylate kinase [tmk]. 1 192 19.421 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CFF04554_RS04470 3b7187971100d3c59cfb98c623ea9970 192 PANTHER PTHR10344 1 192 1.5E-24 T 23-04-2016 CFF04554_RS03585 e67613d99bb847eab79779cde0bd3556 75 SUPERFAMILY SSF117130 1 54 1.09E-16 T 23-04-2016 CFF04554_RS03585 e67613d99bb847eab79779cde0bd3556 75 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 68 4.8E-22 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CFF04554_RS03585 e67613d99bb847eab79779cde0bd3556 75 PANTHER PTHR34984:SF1 1 69 9.1E-17 T 23-04-2016 CFF04554_RS03585 e67613d99bb847eab79779cde0bd3556 75 Pfam PF02599 Global regulator protein family 1 52 1.1E-21 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CFF04554_RS03585 e67613d99bb847eab79779cde0bd3556 75 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 6.0E-11 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CFF04554_RS03585 e67613d99bb847eab79779cde0bd3556 75 PANTHER PTHR34984 1 69 9.1E-17 T 23-04-2016 CFF04554_RS01195 f28816059a2a001543dfdbcae21f0d61 205 SMART SM01207 9 197 8.9E-72 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CFF04554_RS01195 f28816059a2a001543dfdbcae21f0d61 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 205 17.742 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CFF04554_RS01195 f28816059a2a001543dfdbcae21f0d61 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 5 204 7.1E-52 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CFF04554_RS01195 f28816059a2a001543dfdbcae21f0d61 205 PANTHER PTHR30309 1 204 1.2E-50 T 23-04-2016 CFF04554_RS01195 f28816059a2a001543dfdbcae21f0d61 205 PANTHER PTHR30309:SF0 1 204 1.2E-50 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CFF04554_RS01195 f28816059a2a001543dfdbcae21f0d61 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 196 7.3E-42 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 SUPERFAMILY SSF52540 94 294 2.98E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 Pfam PF00448 SRP54-type protein, GTPase domain 98 292 6.0E-69 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 Gene3D G3DSA:1.20.120.140 26 109 2.2E-15 T 23-04-2016 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 SMART SM00962 98 293 6.1E-99 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 Gene3D G3DSA:3.40.50.300 110 293 6.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 SMART SM00963 1 79 4.0E-7 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 266 279 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 426 3.9E-145 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 SUPERFAMILY SSF47446 295 428 3.27E-42 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 SUPERFAMILY SSF47364 2 82 4.04E-12 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 SMART SM00382 97 293 2.6E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 Pfam PF02881 SRP54-type protein, helical bundle domain 6 66 1.9E-8 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 PANTHER PTHR11564:SF7 1 434 4.1E-158 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 Pfam PF02978 Signal peptide binding domain 324 423 1.6E-29 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 Gene3D G3DSA:1.10.260.30 325 428 1.0E-34 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CFF04554_RS05150 9901e2af2b27a9f322630fd31b032fb9 448 PANTHER PTHR11564 1 434 4.1E-158 T 23-04-2016 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 PIRSF PIRSF001220 17 347 2.1E-91 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 PANTHER PTHR11707:SF29 21 344 8.1E-89 T 23-04-2016 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 25 33 - T 23-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 Gene3D G3DSA:3.40.50.1170 20 228 2.0E-70 T 23-04-2016 IPR027474 L-asparaginase, N-terminal CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 Pfam PF00710 Asparaginase, N-terminal 23 214 5.4E-60 T 23-04-2016 IPR027474 L-asparaginase, N-terminal CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 PANTHER PTHR11707 21 344 8.1E-89 T 23-04-2016 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 103 113 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 PIRSF PIRSF500176 19 347 1.9E-79 T 23-04-2016 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 SMART SM00870 22 341 2.2E-145 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 Gene3D G3DSA:3.40.50.40 234 344 1.5E-35 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 PRINTS PR00139 Asparaginase/glutaminase family signature 102 120 1.9E-22 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 PRINTS PR00139 Asparaginase/glutaminase family signature 281 299 1.9E-22 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 PRINTS PR00139 Asparaginase/glutaminase family signature 23 34 1.9E-22 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 SUPERFAMILY SSF53774 21 345 2.75E-104 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CFF04554_RS05080 f9cec190362e9b5d0ded5eacb47e6954 347 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 11 344 6.3E-139 T 23-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CFF04554_RS08115 1d12a1fbb23bc25c3609b586a3675011 175 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.4E-10 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS08115 1d12a1fbb23bc25c3609b586a3675011 175 SUPERFAMILY SSF51161 18 163 7.49E-34 T 23-04-2016 IPR011004 Trimeric LpxA-like CFF04554_RS08115 1d12a1fbb23bc25c3609b586a3675011 175 PANTHER PTHR23416 41 163 2.4E-27 T 23-04-2016 CFF04554_RS08115 1d12a1fbb23bc25c3609b586a3675011 175 Gene3D G3DSA:2.160.10.10 41 163 4.0E-36 T 23-04-2016 CFF04554_RS00275 53c692090a939af5d0e52a26a0fc5268 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.534 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00275 53c692090a939af5d0e52a26a0fc5268 37 Pfam PF00444 Ribosomal protein L36 1 37 6.9E-20 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00275 53c692090a939af5d0e52a26a0fc5268 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 2.9E-23 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00275 53c692090a939af5d0e52a26a0fc5268 37 PANTHER PTHR18804 1 37 7.7E-20 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00275 53c692090a939af5d0e52a26a0fc5268 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00275 53c692090a939af5d0e52a26a0fc5268 37 SUPERFAMILY SSF57840 1 37 6.41E-17 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00275 53c692090a939af5d0e52a26a0fc5268 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 6.0E-8 T 23-04-2016 CFF04554_RS00275 53c692090a939af5d0e52a26a0fc5268 37 PANTHER PTHR18804:SF7 1 37 7.7E-20 T 23-04-2016 CFF04554_RS00690 fcedad479de505eb54a1e09c80d20921 190 SUPERFAMILY SSF48695 18 169 5.24E-19 T 23-04-2016 IPR011031 Multihaem cytochrome CFF04554_RS00690 fcedad479de505eb54a1e09c80d20921 190 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 3 169 2.0E-37 T 23-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal CFF04554_RS00690 fcedad479de505eb54a1e09c80d20921 190 PIRSF PIRSF000013 2 178 1.7E-14 T 23-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CFF04554_RS00690 fcedad479de505eb54a1e09c80d20921 190 Gene3D G3DSA:1.10.3820.10 8 168 2.4E-18 T 23-04-2016 CFF04554_RS00690 fcedad479de505eb54a1e09c80d20921 190 PANTHER PTHR30333 13 167 7.7E-14 T 23-04-2016 CFF04554_RS00915 774087ac7ccdf8a81ae983c7d9acb6e2 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS00915 774087ac7ccdf8a81ae983c7d9acb6e2 253 Pfam PF00005 ABC transporter 22 178 3.9E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS00915 774087ac7ccdf8a81ae983c7d9acb6e2 253 PANTHER PTHR24220:SF585 6 250 3.8E-119 T 23-04-2016 CFF04554_RS00915 774087ac7ccdf8a81ae983c7d9acb6e2 253 Gene3D G3DSA:3.40.50.300 5 246 6.3E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00915 774087ac7ccdf8a81ae983c7d9acb6e2 253 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 253 1.2E-113 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CFF04554_RS00915 774087ac7ccdf8a81ae983c7d9acb6e2 253 SUPERFAMILY SSF52540 5 245 1.49E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00915 774087ac7ccdf8a81ae983c7d9acb6e2 253 PANTHER PTHR24220 6 250 3.8E-119 T 23-04-2016 CFF04554_RS00915 774087ac7ccdf8a81ae983c7d9acb6e2 253 SMART SM00382 31 233 3.8E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 PANTHER PTHR10438 21 101 1.2E-36 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 PIRSF PIRSF000077 1 104 9.4E-38 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 Gene3D G3DSA:3.40.30.10 2 103 1.0E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 PRINTS PR00421 Thioredoxin family signature 20 28 2.6E-10 T 23-04-2016 CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 PRINTS PR00421 Thioredoxin family signature 28 37 2.6E-10 T 23-04-2016 CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 PRINTS PR00421 Thioredoxin family signature 68 79 2.6E-10 T 23-04-2016 CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 PANTHER PTHR10438:SF290 21 101 1.2E-36 T 23-04-2016 CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 SUPERFAMILY SSF52833 3 104 5.89E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 15 102 6.9E-37 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CFF04554_RS01470 4c15ccd6c619c4ed14e5536ac4cc5205 104 Pfam PF00085 Thioredoxin 6 101 6.2E-31 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 CFF04554_RS03630 b5d0b3c39cdfc747932126030c05a544 280 Pfam PF00005 ABC transporter 21 169 1.6E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS03630 b5d0b3c39cdfc747932126030c05a544 280 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS03630 b5d0b3c39cdfc747932126030c05a544 280 SUPERFAMILY SSF52540 4 228 8.74E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03630 b5d0b3c39cdfc747932126030c05a544 280 PANTHER PTHR24220:SF533 7 273 6.5E-102 T 23-04-2016 CFF04554_RS03630 b5d0b3c39cdfc747932126030c05a544 280 SMART SM00382 30 232 1.8E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS03630 b5d0b3c39cdfc747932126030c05a544 280 PANTHER PTHR24220 7 273 6.5E-102 T 23-04-2016 CFF04554_RS03630 b5d0b3c39cdfc747932126030c05a544 280 Gene3D G3DSA:3.40.50.300 5 233 9.6E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02790 0aa286cb2fd7a8adfc976b06e848d85e 530 SMART SM00304 199 253 0.0072 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CFF04554_RS02790 0aa286cb2fd7a8adfc976b06e848d85e 530 PANTHER PTHR32089 153 530 2.1E-52 T 23-04-2016 CFF04554_RS02790 0aa286cb2fd7a8adfc976b06e848d85e 530 Gene3D G3DSA:1.10.287.950 294 491 2.7E-39 T 23-04-2016 CFF04554_RS02790 0aa286cb2fd7a8adfc976b06e848d85e 530 SMART SM00283 254 529 6.1E-15 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS02790 0aa286cb2fd7a8adfc976b06e848d85e 530 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 528 1.1E-30 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS02790 0aa286cb2fd7a8adfc976b06e848d85e 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 7.9E-17 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS02790 0aa286cb2fd7a8adfc976b06e848d85e 530 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 7.9E-17 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS02790 0aa286cb2fd7a8adfc976b06e848d85e 530 SUPERFAMILY SSF58104 221 529 2.88E-50 T 23-04-2016 CFF04554_RS02290 a9c2b444f8a05019e1835e110aaa3697 804 PRINTS PR00313 NodO calcium binding signature 446 454 3.7E-7 T 23-04-2016 CFF04554_RS02290 a9c2b444f8a05019e1835e110aaa3697 804 PRINTS PR00313 NodO calcium binding signature 232 240 3.7E-7 T 23-04-2016 CFF04554_RS02290 a9c2b444f8a05019e1835e110aaa3697 804 PRINTS PR00313 NodO calcium binding signature 656 665 3.7E-7 T 23-04-2016 CFF04554_RS02290 a9c2b444f8a05019e1835e110aaa3697 804 PRINTS PR00313 NodO calcium binding signature 207 218 3.7E-7 T 23-04-2016 CFF04554_RS05465 255a72dca5a5c6771810e90faead4ae6 267 SUPERFAMILY SSF53649 3 254 5.56E-38 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CFF04554_RS05465 255a72dca5a5c6771810e90faead4ae6 267 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 4 209 4.3E-14 T 23-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 CFF04554_RS05465 255a72dca5a5c6771810e90faead4ae6 267 Gene3D G3DSA:3.40.720.10 2 216 1.3E-30 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CFF04554_RS06460 a8d9500007578a6014a7979988a4ac9d 119 PRINTS PR00332 Histidine triad family signature 25 43 5.1E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CFF04554_RS06460 a8d9500007578a6014a7979988a4ac9d 119 PRINTS PR00332 Histidine triad family signature 90 100 5.1E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CFF04554_RS06460 a8d9500007578a6014a7979988a4ac9d 119 PRINTS PR00332 Histidine triad family signature 4 20 5.1E-19 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CFF04554_RS06460 a8d9500007578a6014a7979988a4ac9d 119 Gene3D G3DSA:3.30.428.10 2 107 2.4E-36 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CFF04554_RS06460 a8d9500007578a6014a7979988a4ac9d 119 PANTHER PTHR23089 3 108 4.6E-44 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CFF04554_RS06460 a8d9500007578a6014a7979988a4ac9d 119 PANTHER PTHR23089:SF2 3 108 4.6E-44 T 23-04-2016 CFF04554_RS06460 a8d9500007578a6014a7979988a4ac9d 119 ProSitePatterns PS00892 HIT domain signature. 83 101 - T 23-04-2016 IPR019808 Histidine triad, conserved site CFF04554_RS06460 a8d9500007578a6014a7979988a4ac9d 119 Pfam PF01230 HIT domain 11 102 1.0E-29 T 23-04-2016 IPR001310 Histidine triad (HIT) protein CFF04554_RS06460 a8d9500007578a6014a7979988a4ac9d 119 SUPERFAMILY SSF54197 2 108 1.04E-34 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CFF04554_RS08735 669577654b862bf3abffec210fe29535 271 Pfam PF03150 Di-haem cytochrome c peroxidase 22 160 3.4E-30 T 23-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CFF04554_RS08735 669577654b862bf3abffec210fe29535 271 PANTHER PTHR30600 4 271 5.0E-60 T 23-04-2016 CFF04554_RS08735 669577654b862bf3abffec210fe29535 271 SUPERFAMILY SSF46626 10 148 5.76E-29 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS08735 669577654b862bf3abffec210fe29535 271 PIRSF PIRSF000294 4 271 1.3E-66 T 23-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CFF04554_RS08735 669577654b862bf3abffec210fe29535 271 Gene3D G3DSA:1.10.760.10 14 151 2.8E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS08735 669577654b862bf3abffec210fe29535 271 SUPERFAMILY SSF46626 147 266 6.95E-26 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS08735 669577654b862bf3abffec210fe29535 271 PANTHER PTHR30600:SF7 4 271 5.0E-60 T 23-04-2016 CFF04554_RS08735 669577654b862bf3abffec210fe29535 271 Gene3D G3DSA:1.10.760.10 152 266 2.3E-27 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 Gene3D G3DSA:3.40.50.300 212 367 2.4E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 Pfam PF00270 DEAD/DEAH box helicase 25 194 1.6E-49 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 Pfam PF00271 Helicase conserved C-terminal domain 231 339 1.8E-27 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 PANTHER PTHR24031:SF0 1 555 4.2E-176 T 23-04-2016 CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 SMART SM00487 20 222 1.6E-61 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 PANTHER PTHR24031 1 555 4.2E-176 T 23-04-2016 CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 Gene3D G3DSA:3.40.50.300 3 211 2.6E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 SMART SM00490 258 339 3.1E-32 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS09340 991cdb06268af68065c4899950a3a100 605 SUPERFAMILY SSF52540 75 360 8.15E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05380 15ae0c666f2f05036b5fffdd525781a5 267 PANTHER PTHR34383:SF1 11 262 4.1E-126 T 23-04-2016 CFF04554_RS05380 15ae0c666f2f05036b5fffdd525781a5 267 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 7 231 4.1E-100 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related CFF04554_RS05380 15ae0c666f2f05036b5fffdd525781a5 267 Gene3D G3DSA:3.40.50.300 5 245 8.3E-103 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05380 15ae0c666f2f05036b5fffdd525781a5 267 PANTHER PTHR34383 11 262 4.1E-126 T 23-04-2016 CFF04554_RS05380 15ae0c666f2f05036b5fffdd525781a5 267 SUPERFAMILY SSF52540 37 222 4.87E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05380 15ae0c666f2f05036b5fffdd525781a5 267 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 6 231 3.6E-111 T 23-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 CFF04554_RS05380 15ae0c666f2f05036b5fffdd525781a5 267 PIRSF PIRSF028756 1 261 4.0E-113 T 23-04-2016 IPR016898 Polyphosphate kinase 2 CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 PANTHER PTHR10982 2 283 2.1E-78 T 23-04-2016 CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 SUPERFAMILY SSF52151 196 290 1.75E-47 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 SUPERFAMILY SSF52151 5 128 1.75E-47 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 Gene3D G3DSA:3.30.70.250 126 194 6.6E-20 T 23-04-2016 CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 PIRSF PIRSF000446 2 305 1.4E-70 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 Gene3D G3DSA:3.40.366.10 4 122 3.0E-44 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 Gene3D G3DSA:3.40.366.10 195 298 3.0E-44 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 SUPERFAMILY SSF55048 130 191 7.85E-14 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 8 296 5.1E-12 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 Pfam PF00698 Acyl transferase domain 7 270 2.9E-18 T 23-04-2016 IPR014043 Acyl transferase CFF04554_RS07715 483eba85582f78bc1cfcbc4e60eb2aa5 305 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 5 285 8.2E-85 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CFF04554_RS00280 dd54041930b57771e5b3223fd22b357c 122 PANTHER PTHR10871 1 117 4.0E-63 T 23-04-2016 CFF04554_RS00280 dd54041930b57771e5b3223fd22b357c 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 1.7E-52 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00280 dd54041930b57771e5b3223fd22b357c 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.0E-30 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00280 dd54041930b57771e5b3223fd22b357c 122 SUPERFAMILY SSF46946 2 117 1.62E-44 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CFF04554_RS00280 dd54041930b57771e5b3223fd22b357c 122 Gene3D G3DSA:1.10.8.50 1 71 1.8E-29 T 23-04-2016 CFF04554_RS00280 dd54041930b57771e5b3223fd22b357c 122 PIRSF PIRSF002134 1 122 4.0E-41 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00280 dd54041930b57771e5b3223fd22b357c 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00280 dd54041930b57771e5b3223fd22b357c 122 Gene3D G3DSA:4.10.910.10 74 119 4.9E-25 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal CFF04554_RS00280 dd54041930b57771e5b3223fd22b357c 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 27.564 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS07655 a3f7373b813c753a833b66eaa6e875e5 406 Pfam PF01979 Amidohydrolase family 55 402 1.4E-41 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 CFF04554_RS07655 a3f7373b813c753a833b66eaa6e875e5 406 Gene3D G3DSA:3.20.20.140 61 366 1.1E-40 T 23-04-2016 CFF04554_RS07655 a3f7373b813c753a833b66eaa6e875e5 406 PANTHER PTHR11271:SF7 3 385 9.9E-35 T 23-04-2016 CFF04554_RS07655 a3f7373b813c753a833b66eaa6e875e5 406 SUPERFAMILY SSF51556 58 357 1.56E-46 T 23-04-2016 IPR032466 Metal-dependent hydrolase CFF04554_RS07655 a3f7373b813c753a833b66eaa6e875e5 406 Gene3D G3DSA:2.30.40.10 367 378 1.8E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CFF04554_RS07655 a3f7373b813c753a833b66eaa6e875e5 406 Gene3D G3DSA:2.30.40.10 3 60 1.8E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CFF04554_RS07655 a3f7373b813c753a833b66eaa6e875e5 406 PANTHER PTHR11271 3 385 9.9E-35 T 23-04-2016 CFF04554_RS07655 a3f7373b813c753a833b66eaa6e875e5 406 SUPERFAMILY SSF51338 3 70 7.85E-9 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CFF04554_RS07135 63d57a248f83642a313d810928e58b91 256 Pfam PF01522 Polysaccharide deacetylase 55 205 1.6E-26 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CFF04554_RS07135 63d57a248f83642a313d810928e58b91 256 Gene3D G3DSA:3.20.20.370 131 225 2.4E-28 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CFF04554_RS07135 63d57a248f83642a313d810928e58b91 256 Gene3D G3DSA:3.20.20.370 29 97 2.4E-28 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CFF04554_RS07135 63d57a248f83642a313d810928e58b91 256 SUPERFAMILY SSF88713 18 97 2.67E-37 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CFF04554_RS07135 63d57a248f83642a313d810928e58b91 256 SUPERFAMILY SSF88713 131 225 2.67E-37 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CFF04554_RS07135 63d57a248f83642a313d810928e58b91 256 PANTHER PTHR34216 3 232 6.1E-57 T 23-04-2016 CFF04554_RS05825 577fa40ced8b11e3728fde7b10e4d632 340 SUPERFAMILY SSF51735 4 184 2.68E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS05825 577fa40ced8b11e3728fde7b10e4d632 340 SUPERFAMILY SSF48179 185 334 1.07E-66 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CFF04554_RS05825 577fa40ced8b11e3728fde7b10e4d632 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 1.3E-62 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS05825 577fa40ced8b11e3728fde7b10e4d632 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 6.8E-75 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS05825 577fa40ced8b11e3728fde7b10e4d632 340 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 330 43.848 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS05825 577fa40ced8b11e3728fde7b10e4d632 340 PANTHER PTHR21371 4 339 5.7E-181 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS05825 577fa40ced8b11e3728fde7b10e4d632 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 17 328 2.3E-133 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS05825 577fa40ced8b11e3728fde7b10e4d632 340 Gene3D G3DSA:1.10.1040.10 31 327 8.1E-111 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CFF04554_RS06400 b31c7bab6c74240d635ed05e86f1802c 491 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 9 483 2.8E-215 T 23-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CFF04554_RS06400 b31c7bab6c74240d635ed05e86f1802c 491 PANTHER PTHR11819:SF148 7 474 1.4E-178 T 23-04-2016 CFF04554_RS06400 b31c7bab6c74240d635ed05e86f1802c 491 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 436 8.7E-99 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS06400 b31c7bab6c74240d635ed05e86f1802c 491 PANTHER PTHR11819 7 474 1.4E-178 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS06400 b31c7bab6c74240d635ed05e86f1802c 491 Pfam PF00474 Sodium:solute symporter family 38 436 1.6E-103 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS08650 df1a358244094aeec4cb7bd5509a6b42 147 PANTHER PTHR33695 8 142 1.4E-17 T 23-04-2016 CFF04554_RS08650 df1a358244094aeec4cb7bd5509a6b42 147 Pfam PF01252 Signal peptidase (SPase) II 13 142 5.2E-23 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CFF04554_RS08650 df1a358244094aeec4cb7bd5509a6b42 147 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 147 12.664 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CFF04554_RS08650 df1a358244094aeec4cb7bd5509a6b42 147 TIGRFAM TIGR00077 lspA: signal peptidase II 5 147 2.9E-31 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CFF04554_RS08650 df1a358244094aeec4cb7bd5509a6b42 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 1.2E-12 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CFF04554_RS08650 df1a358244094aeec4cb7bd5509a6b42 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 88 103 1.2E-12 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CFF04554_RS08650 df1a358244094aeec4cb7bd5509a6b42 147 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 123 139 1.2E-12 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CFF04554_RS08650 df1a358244094aeec4cb7bd5509a6b42 147 PANTHER PTHR33695:SF1 8 142 1.4E-17 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CFF04554_RS07900 afb183c25f59cc0994e5e683c34ee3b3 228 Gene3D G3DSA:3.40.50.150 27 210 1.4E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS07900 afb183c25f59cc0994e5e683c34ee3b3 228 SUPERFAMILY SSF53335 23 208 1.07E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS07900 afb183c25f59cc0994e5e683c34ee3b3 228 Pfam PF13489 Methyltransferase domain 33 200 2.6E-12 T 23-04-2016 CFF04554_RS01815 008ae81f8ecef6992f7434c3606ac875 246 Pfam PF13531 Bacterial extracellular solute-binding protein 19 245 6.6E-41 T 23-04-2016 CFF04554_RS01815 008ae81f8ecef6992f7434c3606ac875 246 PANTHER PTHR30632 18 245 7.7E-34 T 23-04-2016 CFF04554_RS01815 008ae81f8ecef6992f7434c3606ac875 246 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 24 243 3.7E-52 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CFF04554_RS01815 008ae81f8ecef6992f7434c3606ac875 246 Gene3D G3DSA:3.40.190.10 18 124 1.9E-33 T 23-04-2016 CFF04554_RS01815 008ae81f8ecef6992f7434c3606ac875 246 Gene3D G3DSA:3.40.190.10 125 186 3.1E-11 T 23-04-2016 CFF04554_RS01815 008ae81f8ecef6992f7434c3606ac875 246 PIRSF PIRSF004846 9 246 1.5E-46 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CFF04554_RS01815 008ae81f8ecef6992f7434c3606ac875 246 SUPERFAMILY SSF53850 18 245 1.23E-51 T 23-04-2016 CFF04554_RS07405 07e51bebcc45a85971ab81c818a8a2e7 384 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 9 209 7.4E-10 T 23-04-2016 IPR008766 Replication gene A protein GO:0006260 CFF04554_RS00790 927271e1da977111ab4b11bedcf45ddd 168 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 43.003 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 CFF04554_RS00790 927271e1da977111ab4b11bedcf45ddd 168 SUPERFAMILY SSF56770 9 159 3.53E-66 T 23-04-2016 CFF04554_RS00790 927271e1da977111ab4b11bedcf45ddd 168 PANTHER PTHR11995:SF14 3 158 4.4E-92 T 23-04-2016 CFF04554_RS00790 927271e1da977111ab4b11bedcf45ddd 168 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 5.0E-69 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 CFF04554_RS00790 927271e1da977111ab4b11bedcf45ddd 168 Gene3D G3DSA:3.40.50.700 21 151 5.0E-33 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CFF04554_RS00790 927271e1da977111ab4b11bedcf45ddd 168 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 38 145 5.1E-23 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CFF04554_RS00790 927271e1da977111ab4b11bedcf45ddd 168 PANTHER PTHR11995 3 158 4.4E-92 T 23-04-2016 CFF04554_RS08260 f7f06412d0eac6cb6833881248d2d43b 149 SUPERFAMILY SSF55729 13 144 2.02E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS08260 f7f06412d0eac6cb6833881248d2d43b 149 Pfam PF00583 Acetyltransferase (GNAT) family 90 133 1.3E-6 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CFF04554_RS08260 f7f06412d0eac6cb6833881248d2d43b 149 Gene3D G3DSA:3.40.630.30 11 143 1.6E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS08260 f7f06412d0eac6cb6833881248d2d43b 149 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 5 136 5.5E-30 T 23-04-2016 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase CFF04554_RS02710 b2a2bcfa2daa36259930e6deb9d1fa37 213 PANTHER PTHR33693 27 213 1.6E-15 T 23-04-2016 CFF04554_RS02710 b2a2bcfa2daa36259930e6deb9d1fa37 213 Gene3D G3DSA:3.40.470.10 38 212 3.5E-29 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS02710 b2a2bcfa2daa36259930e6deb9d1fa37 213 Pfam PF03167 Uracil DNA glycosylase superfamily 67 207 4.4E-13 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS02710 b2a2bcfa2daa36259930e6deb9d1fa37 213 PANTHER PTHR33693:SF1 27 213 1.6E-15 T 23-04-2016 CFF04554_RS02710 b2a2bcfa2daa36259930e6deb9d1fa37 213 SUPERFAMILY SSF52141 38 213 6.54E-30 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS07705 9a926d6e85d0b9c5e4510c6c6f06b4a4 250 PANTHER PTHR11807:SF24 4 241 1.3E-52 T 23-04-2016 CFF04554_RS07705 9a926d6e85d0b9c5e4510c6c6f06b4a4 250 PANTHER PTHR11807 4 241 1.3E-52 T 23-04-2016 CFF04554_RS07705 9a926d6e85d0b9c5e4510c6c6f06b4a4 250 SUPERFAMILY SSF52402 6 217 1.12E-47 T 23-04-2016 CFF04554_RS07705 9a926d6e85d0b9c5e4510c6c6f06b4a4 250 Pfam PF01171 PP-loop family 27 196 3.9E-21 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CFF04554_RS07705 9a926d6e85d0b9c5e4510c6c6f06b4a4 250 Gene3D G3DSA:3.40.50.620 10 189 1.4E-25 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07705 9a926d6e85d0b9c5e4510c6c6f06b4a4 250 PIRSF PIRSF004976 3 249 7.7E-63 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CFF04554_RS01690 9de314b7cf6f4f3c1ed90ffe0e543a11 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 176 2.5E-15 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CFF04554_RS01690 9de314b7cf6f4f3c1ed90ffe0e543a11 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 2 176 3.1E-43 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CFF04554_RS01690 9de314b7cf6f4f3c1ed90ffe0e543a11 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 86 1.0E-28 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CFF04554_RS01690 9de314b7cf6f4f3c1ed90ffe0e543a11 178 SUPERFAMILY SSF50715 6 176 2.44E-39 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 CFF04554_RS01690 9de314b7cf6f4f3c1ed90ffe0e543a11 178 PANTHER PTHR33284 2 177 1.4E-22 T 23-04-2016 CFF04554_RS01690 9de314b7cf6f4f3c1ed90ffe0e543a11 178 Gene3D G3DSA:2.40.240.10 2 88 6.9E-18 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CFF04554_RS01690 9de314b7cf6f4f3c1ed90ffe0e543a11 178 Pfam PF01386 Ribosomal L25p family 2 87 1.9E-15 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CFF04554_RS01690 9de314b7cf6f4f3c1ed90ffe0e543a11 178 Gene3D G3DSA:2.170.120.20 94 177 9.6E-18 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 87 101 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 Gene3D G3DSA:3.30.200.20 6 94 6.1E-34 T 23-04-2016 CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 PANTHER PTHR11609:SF2 3 235 5.3E-103 T 23-04-2016 CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 SUPERFAMILY SSF56104 3 235 1.73E-76 T 23-04-2016 CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 175 183 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 Pfam PF01259 SAICAR synthetase 6 234 4.1E-62 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 PANTHER PTHR11609 3 235 5.3E-103 T 23-04-2016 CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 237 30.419 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 Gene3D G3DSA:3.30.470.20 95 222 1.2E-50 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS04725 daaac7cde1f7e2cccc6a5814ac4251d4 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 235 1.1E-68 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 95 106 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 PANTHER PTHR30559:SF0 1 354 9.9E-220 T 23-04-2016 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 SUPERFAMILY SSF51569 1 353 4.54E-127 T 23-04-2016 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 353 1.0E-161 T 23-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 353 9.8E-90 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 PIRSF PIRSF001359 12 354 6.2E-89 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 PANTHER PTHR30559 1 354 9.9E-220 T 23-04-2016 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 Gene3D G3DSA:3.20.20.70 10 353 5.1E-120 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 353 1.1E-106 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CFF04554_RS02540 1876e36d98a27ee3bf72c24abfede9e8 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 166 177 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CFF04554_RS04610 387150192c5714a7e334ee51bd77733d 115 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 114 1.6E-36 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CFF04554_RS04610 387150192c5714a7e334ee51bd77733d 115 SUPERFAMILY SSF56214 2 114 3.66E-25 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CFF04554_RS04610 387150192c5714a7e334ee51bd77733d 115 Gene3D G3DSA:3.90.470.20 2 114 9.7E-29 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CFF04554_RS04610 387150192c5714a7e334ee51bd77733d 115 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 115 6.3E-27 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CFF04554_RS04610 387150192c5714a7e334ee51bd77733d 115 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 5 111 8.0E-24 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CFF04554_RS04610 387150192c5714a7e334ee51bd77733d 115 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 1 109 5.3E-19 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CFF04554_RS04610 387150192c5714a7e334ee51bd77733d 115 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 115 19.514 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CFF04554_RS00225 9c44a0c542f74f96d51a3672d4f29b40 180 Gene3D G3DSA:3.30.1440.10 2 177 5.1E-66 T 23-04-2016 IPR022803 Ribosomal protein L5 domain CFF04554_RS00225 9c44a0c542f74f96d51a3672d4f29b40 180 Pfam PF00281 Ribosomal protein L5 23 79 3.9E-21 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal CFF04554_RS00225 9c44a0c542f74f96d51a3672d4f29b40 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 37.984 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00225 9c44a0c542f74f96d51a3672d4f29b40 180 SUPERFAMILY SSF55282 1 177 1.01E-66 T 23-04-2016 IPR022803 Ribosomal protein L5 domain CFF04554_RS00225 9c44a0c542f74f96d51a3672d4f29b40 180 PANTHER PTHR11994 2 178 2.6E-74 T 23-04-2016 CFF04554_RS00225 9c44a0c542f74f96d51a3672d4f29b40 180 PANTHER PTHR11994:SF4 2 178 2.6E-74 T 23-04-2016 CFF04554_RS00225 9c44a0c542f74f96d51a3672d4f29b40 180 PIRSF PIRSF002161 1 180 1.3E-61 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00225 9c44a0c542f74f96d51a3672d4f29b40 180 Pfam PF00673 ribosomal L5P family C-terminus 83 176 3.4E-36 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal CFF04554_RS00225 9c44a0c542f74f96d51a3672d4f29b40 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 56 72 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06320 b7bef84f47a293a29fc20d3e4e2088f0 327 PANTHER PTHR11562 23 256 2.2E-20 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CFF04554_RS06320 b7bef84f47a293a29fc20d3e4e2088f0 327 SUPERFAMILY SSF161111 32 237 1.09E-32 T 23-04-2016 CFF04554_RS06320 b7bef84f47a293a29fc20d3e4e2088f0 327 Pfam PF01545 Cation efflux family 37 237 6.4E-33 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CFF04554_RS06320 b7bef84f47a293a29fc20d3e4e2088f0 327 Gene3D G3DSA:1.20.1510.10 34 237 1.6E-25 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain CFF04554_RS05055 094b9ba2fb2177e4085b2a051acb762a 356 Gene3D G3DSA:3.40.718.10 1 349 9.7E-133 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CFF04554_RS05055 094b9ba2fb2177e4085b2a051acb762a 356 SUPERFAMILY SSF53659 4 352 8.64E-126 T 23-04-2016 CFF04554_RS05055 094b9ba2fb2177e4085b2a051acb762a 356 PANTHER PTHR11835 1 356 5.6E-199 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CFF04554_RS05055 094b9ba2fb2177e4085b2a051acb762a 356 SMART SM01329 5 349 8.5E-204 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CFF04554_RS05055 094b9ba2fb2177e4085b2a051acb762a 356 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 347 4.8E-135 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CFF04554_RS05055 094b9ba2fb2177e4085b2a051acb762a 356 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 240 259 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CFF04554_RS05055 094b9ba2fb2177e4085b2a051acb762a 356 PANTHER PTHR11835:SF35 1 356 5.6E-199 T 23-04-2016 CFF04554_RS05055 094b9ba2fb2177e4085b2a051acb762a 356 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 353 50.108 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 CFF04554_RS05055 094b9ba2fb2177e4085b2a051acb762a 356 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 341 4.7E-156 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 CFF04554_RS05275 2fc2d82ed459b0eb98c8f97e42f731f6 399 PANTHER PTHR23514:SF7 1 393 8.6E-119 T 23-04-2016 CFF04554_RS05275 2fc2d82ed459b0eb98c8f97e42f731f6 399 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 8 394 7.8E-91 T 23-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 CFF04554_RS05275 2fc2d82ed459b0eb98c8f97e42f731f6 399 Pfam PF07690 Major Facilitator Superfamily 21 342 1.2E-24 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CFF04554_RS05275 2fc2d82ed459b0eb98c8f97e42f731f6 399 PANTHER PTHR23514 1 393 8.6E-119 T 23-04-2016 CFF04554_RS05275 2fc2d82ed459b0eb98c8f97e42f731f6 399 SUPERFAMILY SSF103473 1 393 1.57E-42 T 23-04-2016 IPR020846 Major facilitator superfamily domain CFF04554_RS05275 2fc2d82ed459b0eb98c8f97e42f731f6 399 Gene3D G3DSA:1.20.1250.20 215 389 2.6E-7 T 23-04-2016 CFF04554_RS05275 2fc2d82ed459b0eb98c8f97e42f731f6 399 Gene3D G3DSA:1.20.1250.20 10 206 4.6E-24 T 23-04-2016 CFF04554_RS05025 83e793f79d68cd93b99a133d1a37313a 426 SMART SM00283 103 346 2.2E-20 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS05025 83e793f79d68cd93b99a133d1a37313a 426 SUPERFAMILY SSF58104 36 64 5.49E-48 T 23-04-2016 CFF04554_RS05025 83e793f79d68cd93b99a133d1a37313a 426 SUPERFAMILY SSF58104 109 351 5.49E-48 T 23-04-2016 CFF04554_RS05025 83e793f79d68cd93b99a133d1a37313a 426 Gene3D G3DSA:1.10.287.950 129 311 6.9E-44 T 23-04-2016 CFF04554_RS05025 83e793f79d68cd93b99a133d1a37313a 426 PANTHER PTHR32089 144 306 2.8E-42 T 23-04-2016 CFF04554_RS05025 83e793f79d68cd93b99a133d1a37313a 426 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 168 306 1.2E-34 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 27.333 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 1.1E-53 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 SUPERFAMILY SSF82866 79 291 4.84E-40 T 23-04-2016 CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 1.8E-81 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 Pfam PF07549 SecD/SecF GG Motif 33 56 4.0E-10 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 Gene3D G3DSA:1.20.1640.10 122 291 2.8E-30 T 23-04-2016 CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 PANTHER PTHR30081 1 322 1.2E-74 T 23-04-2016 CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 1.6E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.6E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 1.6E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 1.6E-32 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFF04554_RS03660 0c659b3188f4e13edfbdea0b1936bdaf 323 Pfam PF02355 Protein export membrane protein 109 291 1.7E-68 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CFF04554_RS01890 653fb721d9a86b6a52349e9b6c6f5f1f 226 Gene3D G3DSA:3.40.50.2300 6 150 1.5E-35 T 23-04-2016 CFF04554_RS01890 653fb721d9a86b6a52349e9b6c6f5f1f 226 Gene3D G3DSA:1.10.10.10 151 223 3.7E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS01890 653fb721d9a86b6a52349e9b6c6f5f1f 226 SMART SM00862 152 222 2.8E-12 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS01890 653fb721d9a86b6a52349e9b6c6f5f1f 226 PANTHER PTHR26402 8 226 1.5E-49 T 23-04-2016 CFF04554_RS01890 653fb721d9a86b6a52349e9b6c6f5f1f 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 222 1.3E-12 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS01890 653fb721d9a86b6a52349e9b6c6f5f1f 226 SMART SM00448 8 119 8.6E-32 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS01890 653fb721d9a86b6a52349e9b6c6f5f1f 226 SUPERFAMILY SSF52172 6 173 1.34E-35 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS01890 653fb721d9a86b6a52349e9b6c6f5f1f 226 Pfam PF00072 Response regulator receiver domain 10 119 1.5E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 SUPERFAMILY SSF55973 249 396 1.29E-49 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 PANTHER PTHR11964 2 393 3.5E-138 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 Gene3D G3DSA:3.30.300.10 134 241 7.5E-21 T 23-04-2016 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 121 131 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 249 387 5.1E-51 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 Gene3D G3DSA:3.30.300.10 9 114 2.7E-42 T 23-04-2016 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 Gene3D G3DSA:3.30.300.10 242 268 2.7E-42 T 23-04-2016 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 Gene3D G3DSA:3.30.300.10 269 396 5.5E-53 T 23-04-2016 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 3 396 1.0E-111 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 SUPERFAMILY SSF55973 119 243 7.85E-31 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 Pfam PF02772 S-adenosylmethionine synthetase, central domain 119 242 2.4E-28 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 PIRSF PIRSF000497 1 398 1.1E-135 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 2 107 2.1E-29 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 PANTHER PTHR11964:SF1 2 393 3.5E-138 T 23-04-2016 CFF04554_RS03620 6c7e94b9578a567c626f5fa7eb766396 398 SUPERFAMILY SSF55973 2 116 4.71E-33 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CFF04554_RS04305 a44958bbf0a1c4358d6e050439487adb 176 Gene3D G3DSA:3.40.980.10 3 165 5.4E-57 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS04305 a44958bbf0a1c4358d6e050439487adb 176 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 146 1.0E-42 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS04305 a44958bbf0a1c4358d6e050439487adb 176 PANTHER PTHR10192 1 173 1.7E-86 T 23-04-2016 CFF04554_RS04305 a44958bbf0a1c4358d6e050439487adb 176 SUPERFAMILY SSF53218 2 156 1.06E-47 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS04305 a44958bbf0a1c4358d6e050439487adb 176 Pfam PF00994 Probable molybdopterin binding domain 6 150 5.2E-34 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS04305 a44958bbf0a1c4358d6e050439487adb 176 SMART SM00852 6 152 3.0E-30 T 23-04-2016 IPR001453 MoaB/Mog domain CFF04554_RS01865 672430072f853aa449b59228a41bbab4 177 Gene3D G3DSA:1.25.60.10 68 164 2.2E-9 T 23-04-2016 CFF04554_RS01865 672430072f853aa449b59228a41bbab4 177 SUPERFAMILY SSF158791 68 164 2.75E-11 T 23-04-2016 CFF04554_RS01865 672430072f853aa449b59228a41bbab4 177 Pfam PF03448 MgtE intracellular N domain 71 166 1.1E-9 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 PANTHER PTHR24321:SF6 6 261 9.0E-26 T 23-04-2016 CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 Gene3D G3DSA:3.40.50.720 7 261 2.1E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 PANTHER PTHR24321 6 261 9.0E-26 T 23-04-2016 CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 260 4.4E-60 T 23-04-2016 CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 SUPERFAMILY SSF51735 9 260 1.58E-66 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 2.59E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 2.59E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 2.59E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 2.59E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.59E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS03930 61a2eb3fcadda57f4da6a4d0ffd652bf 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.59E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS00055 914497583bb42d3f6b0e9ad2150295d7 396 PANTHER PTHR23502 12 395 5.8E-104 T 23-04-2016 CFF04554_RS00055 914497583bb42d3f6b0e9ad2150295d7 396 Gene3D G3DSA:1.20.1250.20 13 193 1.0E-28 T 23-04-2016 CFF04554_RS00055 914497583bb42d3f6b0e9ad2150295d7 396 PANTHER PTHR23502:SF19 12 395 5.8E-104 T 23-04-2016 CFF04554_RS00055 914497583bb42d3f6b0e9ad2150295d7 396 SUPERFAMILY SSF103473 9 392 1.15E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain CFF04554_RS00055 914497583bb42d3f6b0e9ad2150295d7 396 Gene3D G3DSA:1.20.1250.20 215 391 1.6E-5 T 23-04-2016 CFF04554_RS00055 914497583bb42d3f6b0e9ad2150295d7 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 11 389 5.2E-90 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CFF04554_RS00055 914497583bb42d3f6b0e9ad2150295d7 396 Pfam PF07690 Major Facilitator Superfamily 19 358 1.0E-43 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 PANTHER PTHR23504:SF37 3 410 3.2E-83 T 23-04-2016 CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 Pfam PF07690 Major Facilitator Superfamily 9 318 3.3E-43 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 PANTHER PTHR23504 3 410 3.2E-83 T 23-04-2016 CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 PRINTS PR01035 Tetracycline resistance protein signature 98 119 1.2E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 PRINTS PR01035 Tetracycline resistance protein signature 128 150 1.2E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 PRINTS PR01035 Tetracycline resistance protein signature 265 286 1.2E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 PRINTS PR01035 Tetracycline resistance protein signature 41 60 1.2E-6 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 SUPERFAMILY SSF103473 4 377 3.27E-66 T 23-04-2016 IPR020846 Major facilitator superfamily domain CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 Gene3D G3DSA:1.20.1250.20 3 184 4.8E-35 T 23-04-2016 CFF04554_RS00920 487772b170ef0a729454a4cc97a90ea3 430 Gene3D G3DSA:1.20.1250.20 198 379 1.1E-25 T 23-04-2016 CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 SUPERFAMILY SSF52540 200 501 1.06E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 Gene3D G3DSA:3.30.230.10 9 163 1.1E-18 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 Gene3D G3DSA:3.40.50.300 200 396 9.8E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 410 501 1.9E-22 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 SUPERFAMILY SSF54211 11 165 2.05E-20 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 Pfam PF13541 Subunit ChlI of Mg-chelatase 18 137 2.5E-31 T 23-04-2016 CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 Pfam PF01078 Magnesium chelatase, subunit ChlI 201 404 1.6E-73 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 PANTHER PTHR32039 15 176 4.3E-144 T 23-04-2016 CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 PANTHER PTHR32039 201 502 4.3E-144 T 23-04-2016 CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 SMART SM00382 221 399 1.8E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 501 6.9E-125 T 23-04-2016 IPR004482 Mg chelatase-related protein CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 PANTHER PTHR32039:SF7 15 176 4.3E-144 T 23-04-2016 IPR004482 Mg chelatase-related protein CFF04554_RS08525 18ffcaf2cde0f99278961fe759d88650 504 PANTHER PTHR32039:SF7 201 502 4.3E-144 T 23-04-2016 IPR004482 Mg chelatase-related protein CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 9.1E-18 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 SUPERFAMILY SSF55681 117 414 6.84E-93 T 23-04-2016 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 Gene3D G3DSA:3.30.930.10 106 414 2.4E-132 T 23-04-2016 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 2.5E-164 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 3.3E-28 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 3.3E-28 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 3.3E-28 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 3.3E-28 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 3.3E-28 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 PANTHER PTHR11778:SF0 1 414 4.3E-185 T 23-04-2016 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 PIRSF PIRSF001529 1 414 9.6E-164 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 PANTHER PTHR11778 1 414 4.3E-185 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 Gene3D G3DSA:1.10.287.40 1 105 2.7E-13 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 SUPERFAMILY SSF46589 1 113 9.94E-18 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 397 1.9E-35 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06855 5f64081b87884c5689f5e1c128a1263a 414 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 414 37.595 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 PANTHER PTHR11349 1 137 1.8E-72 T 23-04-2016 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 SMART SM00562 1 137 5.9E-83 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 35.261 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 Gene3D G3DSA:3.30.70.141 1 136 7.3E-60 T 23-04-2016 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 23-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 Pfam PF00334 Nucleoside diphosphate kinase 2 136 2.1E-56 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 2.6E-42 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 2.6E-42 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 2.6E-42 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 2.6E-42 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 2.6E-42 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CFF04554_RS01160 99525b36b2971dc7fa44698e1f9c538e 137 SUPERFAMILY SSF54919 1 136 1.07E-57 T 23-04-2016 CFF04554_RS00085 948c36c78c28326306dc2cd3ef680924 319 Pfam PF00005 ABC transporter 20 163 3.8E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS00085 948c36c78c28326306dc2cd3ef680924 319 SMART SM00382 29 212 1.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS00085 948c36c78c28326306dc2cd3ef680924 319 Gene3D G3DSA:3.40.50.300 3 239 4.0E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00085 948c36c78c28326306dc2cd3ef680924 319 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS00085 948c36c78c28326306dc2cd3ef680924 319 PANTHER PTHR24220:SF282 6 239 2.2E-88 T 23-04-2016 CFF04554_RS00085 948c36c78c28326306dc2cd3ef680924 319 SUPERFAMILY SSF52540 4 241 6.02E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00085 948c36c78c28326306dc2cd3ef680924 319 PANTHER PTHR24220 6 239 2.2E-88 T 23-04-2016 CFF04554_RS01355 7f735210bacef476ccf8e911bf64dc0f 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 12 350 1.4E-32 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 CFF04554_RS03070 8d382340ccf8c5e9c6dba03f008fc0fc 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 238 1.8E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS03070 8d382340ccf8c5e9c6dba03f008fc0fc 245 Gene3D G3DSA:1.10.3720.10 45 236 1.0E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS03070 8d382340ccf8c5e9c6dba03f008fc0fc 245 PANTHER PTHR30151 1 237 4.6E-56 T 23-04-2016 CFF04554_RS03070 8d382340ccf8c5e9c6dba03f008fc0fc 245 SUPERFAMILY SSF161098 43 225 1.96E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00620 afbe5f3b6cb50f4de70e527e6f1dedbf 154 PANTHER PTHR30302 7 148 6.5E-15 T 23-04-2016 CFF04554_RS00620 afbe5f3b6cb50f4de70e527e6f1dedbf 154 PANTHER PTHR30302:SF4 7 148 6.5E-15 T 23-04-2016 CFF04554_RS00620 afbe5f3b6cb50f4de70e527e6f1dedbf 154 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 12 148 8.8E-21 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CFF04554_RS00620 afbe5f3b6cb50f4de70e527e6f1dedbf 154 Gene3D G3DSA:3.40.50.1450 12 149 6.7E-14 T 23-04-2016 IPR023430 Peptidase HybD-like domain CFF04554_RS00620 afbe5f3b6cb50f4de70e527e6f1dedbf 154 SUPERFAMILY SSF53163 11 149 5.36E-22 T 23-04-2016 IPR023430 Peptidase HybD-like domain CFF04554_RS05130 108eb4802b6c9cff778445ce881237b3 227 Gene3D G3DSA:3.40.1280.10 1 155 1.0E-56 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFF04554_RS05130 108eb4802b6c9cff778445ce881237b3 227 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 224 8.5E-83 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CFF04554_RS05130 108eb4802b6c9cff778445ce881237b3 227 PANTHER PTHR32125:SF1 1 223 2.5E-75 T 23-04-2016 CFF04554_RS05130 108eb4802b6c9cff778445ce881237b3 227 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 216 4.5E-55 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CFF04554_RS05130 108eb4802b6c9cff778445ce881237b3 227 SUPERFAMILY SSF75217 1 223 3.6E-80 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CFF04554_RS05130 108eb4802b6c9cff778445ce881237b3 227 PIRSF PIRSF000386 1 227 4.0E-82 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CFF04554_RS05130 108eb4802b6c9cff778445ce881237b3 227 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 227 80.545 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CFF04554_RS05130 108eb4802b6c9cff778445ce881237b3 227 PANTHER PTHR32125 1 223 2.5E-75 T 23-04-2016 CFF04554_RS05130 108eb4802b6c9cff778445ce881237b3 227 Gene3D G3DSA:1.10.1270.20 156 224 6.1E-20 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 SUPERFAMILY SSF69336 1199 1456 1.31E-83 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 Pfam PF01645 Conserved region in glutamate synthase 796 1155 5.7E-141 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 Pfam PF04898 Glutamate synthase central domain 452 734 3.7E-93 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 Gene3D G3DSA:3.60.20.10 11 431 1.1E-143 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 Gene3D G3DSA:3.20.20.70 440 771 6.9E-79 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 PANTHER PTHR11938:SF1 4 1463 0.0 T 23-04-2016 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 Gene3D G3DSA:3.20.20.70 829 1174 1.7E-150 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 SUPERFAMILY SSF51395 443 1171 3.98E-221 T 23-04-2016 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 Pfam PF00310 Glutamine amidotransferases class-II 11 421 4.4E-143 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 PANTHER PTHR11938 4 1463 0.0 T 23-04-2016 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 SUPERFAMILY SSF56235 11 425 4.34E-123 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 Pfam PF01493 GXGXG motif 1227 1409 4.1E-73 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CFF04554_RS07570 b52c3f1ab36aabb9bfdaef2b1738d672 1465 Gene3D G3DSA:2.160.20.60 1208 1456 8.4E-87 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CFF04554_RS00440 e901c425f8df16117e22e773a2809a6a 272 Gene3D G3DSA:3.90.650.10 132 262 2.3E-22 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS00440 e901c425f8df16117e22e773a2809a6a 272 Gene3D G3DSA:3.30.1330.10 9 126 2.8E-30 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS00440 e901c425f8df16117e22e773a2809a6a 272 SUPERFAMILY SSF56042 129 262 1.64E-19 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS00440 e901c425f8df16117e22e773a2809a6a 272 SUPERFAMILY SSF55326 10 122 2.27E-27 T 23-04-2016 CFF04554_RS00440 e901c425f8df16117e22e773a2809a6a 272 PANTHER PTHR30270:SF0 3 262 2.6E-64 T 23-04-2016 CFF04554_RS00440 e901c425f8df16117e22e773a2809a6a 272 PANTHER PTHR30270 3 262 2.6E-64 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CFF04554_RS00440 e901c425f8df16117e22e773a2809a6a 272 Pfam PF00586 AIR synthase related protein, N-terminal domain 18 122 1.6E-18 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS05695 5bd3db0bda9cb35fb7aaf6d920dafa8e 295 SMART SM00382 98 228 5.6E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS05695 5bd3db0bda9cb35fb7aaf6d920dafa8e 295 Pfam PF13401 AAA domain 98 210 7.7E-20 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS05695 5bd3db0bda9cb35fb7aaf6d920dafa8e 295 Gene3D G3DSA:3.40.50.300 89 212 1.2E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05695 5bd3db0bda9cb35fb7aaf6d920dafa8e 295 SUPERFAMILY SSF52540 99 284 8.33E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05335 f560914e84a7f3392f83548d5d111f1f 377 Gene3D G3DSA:3.40.640.10 4 252 3.2E-60 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS05335 f560914e84a7f3392f83548d5d111f1f 377 PIRSF PIRSF000390 1 376 6.8E-81 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS05335 f560914e84a7f3392f83548d5d111f1f 377 PANTHER PTHR30244:SF3 6 376 1.4E-75 T 23-04-2016 CFF04554_RS05335 f560914e84a7f3392f83548d5d111f1f 377 Gene3D G3DSA:3.90.1150.10 255 374 7.1E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS05335 f560914e84a7f3392f83548d5d111f1f 377 SUPERFAMILY SSF53383 3 373 4.92E-88 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS05335 f560914e84a7f3392f83548d5d111f1f 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 369 2.0E-88 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS05335 f560914e84a7f3392f83548d5d111f1f 377 PANTHER PTHR30244 6 376 1.4E-75 T 23-04-2016 CFF04554_RS08060 d31ee7dc4ba1095e5cedd7afc152c731 364 Gene3D G3DSA:3.20.20.70 36 342 1.2E-44 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS08060 d31ee7dc4ba1095e5cedd7afc152c731 364 SUPERFAMILY SSF102114 35 338 1.96E-44 T 23-04-2016 CFF04554_RS08060 d31ee7dc4ba1095e5cedd7afc152c731 364 PANTHER PTHR11228 32 347 3.1E-34 T 23-04-2016 CFF04554_RS08060 d31ee7dc4ba1095e5cedd7afc152c731 364 Pfam PF04055 Radical SAM superfamily 45 204 3.3E-12 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS08060 d31ee7dc4ba1095e5cedd7afc152c731 364 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 283 344 2.8E-7 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CFF04554_RS08060 d31ee7dc4ba1095e5cedd7afc152c731 364 Pfam PF13186 Iron-sulfur cluster-binding domain 275 342 9.8E-10 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CFF04554_RS03035 3963124eed1af6212ca9945a1372a073 368 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 11 365 3.7E-116 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 CFF04554_RS03035 3963124eed1af6212ca9945a1372a073 368 SUPERFAMILY SSF53474 7 363 3.34E-89 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CFF04554_RS03035 3963124eed1af6212ca9945a1372a073 368 PANTHER PTHR32268 3 366 1.5E-138 T 23-04-2016 CFF04554_RS03035 3963124eed1af6212ca9945a1372a073 368 PIRSF PIRSF000443 2 368 4.3E-125 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 CFF04554_RS03035 3963124eed1af6212ca9945a1372a073 368 PANTHER PTHR32268:SF11 3 366 1.5E-138 T 23-04-2016 CFF04554_RS03035 3963124eed1af6212ca9945a1372a073 368 Gene3D G3DSA:3.40.50.1820 20 363 6.7E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold CFF04554_RS03035 3963124eed1af6212ca9945a1372a073 368 Pfam PF00561 alpha/beta hydrolase fold 41 353 2.1E-26 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 CFF04554_RS06495 9f1f40f6289bb4141ebeda4360f77ed9 211 Gene3D G3DSA:3.40.50.10090 29 125 1.7E-10 T 23-04-2016 CFF04554_RS06495 9f1f40f6289bb4141ebeda4360f77ed9 211 SUPERFAMILY SSF69618 15 186 2.88E-27 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS06495 9f1f40f6289bb4141ebeda4360f77ed9 211 Pfam PF02602 Uroporphyrinogen-III synthase HemD 30 185 3.4E-24 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CFF04554_RS06495 9f1f40f6289bb4141ebeda4360f77ed9 211 Gene3D G3DSA:3.40.50.10090 126 185 1.2E-6 T 23-04-2016 CFF04554_RS07830 66e7690611e47a04166aca21ab1e2714 344 PANTHER PTHR30600 56 330 2.5E-89 T 23-04-2016 CFF04554_RS07830 66e7690611e47a04166aca21ab1e2714 344 PANTHER PTHR30600:SF7 56 330 2.5E-89 T 23-04-2016 CFF04554_RS07830 66e7690611e47a04166aca21ab1e2714 344 PIRSF PIRSF000294 4 344 5.4E-124 T 23-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CFF04554_RS07830 66e7690611e47a04166aca21ab1e2714 344 Pfam PF00034 Cytochrome c 218 319 1.8E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07830 66e7690611e47a04166aca21ab1e2714 344 Gene3D G3DSA:1.10.760.10 202 336 3.7E-36 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07830 66e7690611e47a04166aca21ab1e2714 344 SUPERFAMILY SSF46626 53 198 5.07E-44 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07830 66e7690611e47a04166aca21ab1e2714 344 SUPERFAMILY SSF46626 197 340 3.2E-34 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07830 66e7690611e47a04166aca21ab1e2714 344 Gene3D G3DSA:1.10.760.10 55 201 2.2E-42 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07830 66e7690611e47a04166aca21ab1e2714 344 Pfam PF03150 Di-haem cytochrome c peroxidase 61 209 4.1E-42 T 23-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CFF04554_RS01345 fc95e8842ae9b2f7712ad716ded1686d 259 SUPERFAMILY SSF56784 2 233 1.04E-33 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS01345 fc95e8842ae9b2f7712ad716ded1686d 259 Pfam PF13344 Haloacid dehalogenase-like hydrolase 3 100 1.3E-13 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA CFF04554_RS01345 fc95e8842ae9b2f7712ad716ded1686d 259 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 3 226 3.0E-40 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA CFF04554_RS01345 fc95e8842ae9b2f7712ad716ded1686d 259 Gene3D G3DSA:3.40.50.10410 76 168 1.4E-13 T 23-04-2016 IPR023215 Nitrophenylphosphatase-like domain CFF04554_RS01345 fc95e8842ae9b2f7712ad716ded1686d 259 Pfam PF13242 HAD-hyrolase-like 172 234 6.7E-10 T 23-04-2016 CFF04554_RS01345 fc95e8842ae9b2f7712ad716ded1686d 259 PANTHER PTHR19288 1 259 2.9E-29 T 23-04-2016 CFF04554_RS01345 fc95e8842ae9b2f7712ad716ded1686d 259 PANTHER PTHR19288:SF3 1 259 2.9E-29 T 23-04-2016 CFF04554_RS01345 fc95e8842ae9b2f7712ad716ded1686d 259 Gene3D G3DSA:3.40.50.1000 2 75 3.7E-23 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS01345 fc95e8842ae9b2f7712ad716ded1686d 259 Gene3D G3DSA:3.40.50.1000 169 255 3.7E-23 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 SUPERFAMILY SSF46894 125 221 1.55E-22 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 SMART SM00862 147 220 2.1E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 PANTHER PTHR26402:SF614 2 220 1.1E-68 T 23-04-2016 CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 Gene3D G3DSA:3.40.50.2300 2 125 5.1E-34 T 23-04-2016 CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 SUPERFAMILY SSF52172 2 124 5.12E-34 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 220 2.0E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 PANTHER PTHR26402 2 220 1.1E-68 T 23-04-2016 CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 SMART SM00448 2 112 1.9E-34 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 Gene3D G3DSA:1.10.10.10 131 220 1.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS02260 f34adcc7440bb0d3b9a30365b12796b9 222 Pfam PF00072 Response regulator receiver domain 4 112 1.5E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS05425 491b5e0cc6d9853d54bfb977bbdd0ab0 134 Gene3D G3DSA:1.10.10.10 4 134 2.9E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS05425 491b5e0cc6d9853d54bfb977bbdd0ab0 134 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 133 2.1E-31 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CFF04554_RS05425 491b5e0cc6d9853d54bfb977bbdd0ab0 134 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 47 65 - T 23-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site CFF04554_RS05425 491b5e0cc6d9853d54bfb977bbdd0ab0 134 PANTHER PTHR33221 3 133 5.1E-25 T 23-04-2016 CFF04554_RS05425 491b5e0cc6d9853d54bfb977bbdd0ab0 134 Pfam PF02082 Transcriptional regulator 4 79 2.1E-17 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CFF04554_RS05425 491b5e0cc6d9853d54bfb977bbdd0ab0 134 SUPERFAMILY SSF46785 4 133 1.67E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS05145 692623d5f5f78259c52ca8f40a661f1a 75 TIGRFAM TIGR00002 S16: ribosomal protein bS16 5 73 3.8E-26 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05145 692623d5f5f78259c52ca8f40a661f1a 75 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 23-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05145 692623d5f5f78259c52ca8f40a661f1a 75 Pfam PF00886 Ribosomal protein S16 9 67 2.4E-23 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05145 692623d5f5f78259c52ca8f40a661f1a 75 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 75 19.38 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05145 692623d5f5f78259c52ca8f40a661f1a 75 PANTHER PTHR12919 2 73 7.3E-28 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05145 692623d5f5f78259c52ca8f40a661f1a 75 SUPERFAMILY SSF54565 3 73 6.8E-27 T 23-04-2016 IPR023803 Ribosomal protein S16 domain CFF04554_RS05145 692623d5f5f78259c52ca8f40a661f1a 75 Gene3D G3DSA:3.30.1320.10 4 74 6.1E-28 T 23-04-2016 IPR023803 Ribosomal protein S16 domain CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 SUPERFAMILY SSF53927 3 170 2.26E-35 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 SUPERFAMILY SSF53597 178 333 2.86E-16 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 129 3.3E-19 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 PANTHER PTHR11079 90 230 1.4E-24 T 23-04-2016 CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 PANTHER PTHR11079 4 64 1.4E-24 T 23-04-2016 CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 Gene3D G3DSA:3.40.430.10 177 282 7.6E-14 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 Gene3D G3DSA:3.40.140.10 3 169 2.8E-26 T 23-04-2016 CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 256 3.0E-66 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 PANTHER PTHR11079:SF10 90 230 1.4E-24 T 23-04-2016 CFF04554_RS07575 43c1aa139be24c8b9f3863f09fd39d9f 336 PANTHER PTHR11079:SF10 4 64 1.4E-24 T 23-04-2016 CFF04554_RS07885 acda76d432d9e4d1df0b59c02eb51b75 247 SUPERFAMILY SSF51658 3 236 8.15E-31 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CFF04554_RS07885 acda76d432d9e4d1df0b59c02eb51b75 247 Gene3D G3DSA:3.20.20.150 9 245 6.7E-19 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 PANTHER PTHR11655:SF14 1 178 2.5E-68 T 23-04-2016 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 34.088 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 SUPERFAMILY SSF56053 2 82 6.48E-19 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 8.4E-67 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 PIRSF PIRSF002162 1 176 2.0E-42 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 SUPERFAMILY SSF56053 83 175 1.83E-33 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 Gene3D G3DSA:3.90.930.12 2 82 9.4E-21 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 7.8E-31 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 7.8E-31 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 PRINTS PR00059 Ribosomal protein L6 signature 140 161 7.8E-31 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 PANTHER PTHR11655 1 178 2.5E-68 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 Pfam PF00347 Ribosomal protein L6 91 163 3.5E-18 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 Pfam PF00347 Ribosomal protein L6 11 82 7.3E-7 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 Gene3D G3DSA:3.90.930.12 83 176 1.7E-36 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CFF04554_RS00240 1004d746d707201faf6f1934c67fcd21 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS02820 2333e33e052ba2a164cc0963217c094a 197 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 183 3.9E-21 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CFF04554_RS02820 2333e33e052ba2a164cc0963217c094a 197 SUPERFAMILY SSF53639 9 187 2.94E-27 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CFF04554_RS02820 2333e33e052ba2a164cc0963217c094a 197 Gene3D G3DSA:3.40.225.10 9 187 2.7E-17 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CFF04554_RS02820 2333e33e052ba2a164cc0963217c094a 197 SMART SM01007 8 185 3.2E-20 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 30 161 5.7E-23 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 Pfam PF00374 Nickel-dependent hydrogenase 227 295 1.7E-11 T 23-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 PANTHER PTHR11993 133 554 1.0E-169 T 23-04-2016 CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 Gene3D G3DSA:1.10.645.10 185 418 4.0E-50 T 23-04-2016 IPR029014 NiFe hydrogenase-like CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 Gene3D G3DSA:1.10.645.10 419 546 6.6E-27 T 23-04-2016 IPR029014 NiFe hydrogenase-like CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 SUPERFAMILY SSF56762 201 547 5.36E-103 T 23-04-2016 IPR029014 NiFe hydrogenase-like CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 97 148 2.0E-21 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 PANTHER PTHR11993:SF29 133 554 1.0E-169 T 23-04-2016 CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 SUPERFAMILY SSF143243 7 203 2.88E-41 T 23-04-2016 CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 482 547 1.3E-10 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 CFF04554_RS00640 60d049153574a6342254d7c183c7c659 582 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 305 471 2.2E-38 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 CFF04554_RS06130 21022e7ccb50593d9d0cf4b741341988 162 Gene3D G3DSA:3.40.50.1000 1 155 2.1E-29 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS06130 21022e7ccb50593d9d0cf4b741341988 162 PANTHER PTHR21485:SF3 2 160 3.7E-30 T 23-04-2016 CFF04554_RS06130 21022e7ccb50593d9d0cf4b741341988 162 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 150 4.4E-48 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CFF04554_RS06130 21022e7ccb50593d9d0cf4b741341988 162 PIRSF PIRSF006118 1 162 1.1E-51 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CFF04554_RS06130 21022e7ccb50593d9d0cf4b741341988 162 SUPERFAMILY SSF56784 1 149 4.73E-28 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS06130 21022e7ccb50593d9d0cf4b741341988 162 PANTHER PTHR21485 2 160 3.7E-30 T 23-04-2016 CFF04554_RS04245 1a47726f0e80d7b8e1245dc4e2e526d8 104 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.4E-29 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CFF04554_RS04245 1a47726f0e80d7b8e1245dc4e2e526d8 104 SUPERFAMILY SSF47729 1 90 1.37E-28 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CFF04554_RS04245 1a47726f0e80d7b8e1245dc4e2e526d8 104 SMART SM00411 1 90 3.2E-36 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CFF04554_RS04245 1a47726f0e80d7b8e1245dc4e2e526d8 104 PANTHER PTHR33175 1 89 1.3E-34 T 23-04-2016 CFF04554_RS04245 1a47726f0e80d7b8e1245dc4e2e526d8 104 Gene3D G3DSA:4.10.520.10 1 91 7.1E-32 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CFF04554_RS04245 1a47726f0e80d7b8e1245dc4e2e526d8 104 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 9.4E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CFF04554_RS04245 1a47726f0e80d7b8e1245dc4e2e526d8 104 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 9.4E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CFF04554_RS04245 1a47726f0e80d7b8e1245dc4e2e526d8 104 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 9.4E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CFF04554_RS02465 56c87df7a406440d6a0dd3a359436dfb 184 Pfam PF08534 Redoxin 67 146 3.0E-12 T 23-04-2016 IPR013740 Redoxin GO:0016491 CFF04554_RS02465 56c87df7a406440d6a0dd3a359436dfb 184 SUPERFAMILY SSF52833 7 182 6.98E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS02465 56c87df7a406440d6a0dd3a359436dfb 184 Gene3D G3DSA:3.40.30.10 5 183 1.9E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS00360 62174d91fe88cee7aa8dd67ffc3b7081 693 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 462 589 2.9E-34 T 23-04-2016 IPR025299 CstA, C-terminal domain CFF04554_RS00360 62174d91fe88cee7aa8dd67ffc3b7081 693 Pfam PF02554 Carbon starvation protein CstA 32 395 1.7E-160 T 23-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CFF04554_RS00360 62174d91fe88cee7aa8dd67ffc3b7081 693 PANTHER PTHR30252 6 687 0.0 T 23-04-2016 CFF04554_RS00360 62174d91fe88cee7aa8dd67ffc3b7081 693 PANTHER PTHR30252:SF3 6 687 0.0 T 23-04-2016 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 Gene3D G3DSA:3.10.20.30 410 470 3.7E-10 T 23-04-2016 IPR012675 Beta-grasp domain CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 PANTHER PTHR21262:SF0 39 725 1.0E-179 T 23-04-2016 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 PANTHER PTHR21262 39 725 1.0E-179 T 23-04-2016 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 SMART SM00954 263 372 4.6E-58 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 Gene3D G3DSA:3.30.460.10 217 351 2.8E-37 T 23-04-2016 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 SMART SM00471 58 178 2.9E-7 T 23-04-2016 IPR003607 HD/PDEase domain CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 SUPERFAMILY SSF81301 217 371 1.96E-51 T 23-04-2016 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 SUPERFAMILY SSF109604 38 214 9.1E-59 T 23-04-2016 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 Pfam PF02824 TGS domain 410 469 7.5E-17 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 SUPERFAMILY SSF81271 399 469 3.43E-16 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 Pfam PF04607 Region found in RelA / SpoT proteins 263 371 4.6E-34 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 Pfam PF13328 HD domain 43 200 7.3E-43 T 23-04-2016 IPR003607 HD/PDEase domain CFF04554_RS06250 6c43838fa8b43b81f8b4faa77d1b6f32 732 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 45 706 1.1E-196 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 CFF04554_RS06325 ea828b71f3c76176e478aeb58ce672bd 553 Gene3D G3DSA:1.10.287.950 355 543 2.4E-45 T 23-04-2016 CFF04554_RS06325 ea828b71f3c76176e478aeb58ce672bd 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 407 550 5.6E-36 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS06325 ea828b71f3c76176e478aeb58ce672bd 553 SUPERFAMILY SSF58104 235 263 7.19E-51 T 23-04-2016 CFF04554_RS06325 ea828b71f3c76176e478aeb58ce672bd 553 SUPERFAMILY SSF58104 339 549 7.19E-51 T 23-04-2016 CFF04554_RS06325 ea828b71f3c76176e478aeb58ce672bd 553 PANTHER PTHR32089 65 243 7.3E-51 T 23-04-2016 CFF04554_RS06325 ea828b71f3c76176e478aeb58ce672bd 553 PANTHER PTHR32089 343 541 7.3E-51 T 23-04-2016 CFF04554_RS06325 ea828b71f3c76176e478aeb58ce672bd 553 SMART SM00283 336 549 1.6E-26 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS06325 ea828b71f3c76176e478aeb58ce672bd 553 Pfam PF12729 Four helix bundle sensory module for signal transduction 7 133 1.1E-11 T 23-04-2016 IPR024478 4HB MCP domain CFF04554_RS01735 53b0f895ede4a979d0219d6d6bcd5889 552 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 220 541 4.7E-69 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CFF04554_RS01735 53b0f895ede4a979d0219d6d6bcd5889 552 PANTHER PTHR10283 234 551 1.7E-156 T 23-04-2016 CFF04554_RS01735 53b0f895ede4a979d0219d6d6bcd5889 552 PANTHER PTHR10283 59 182 1.7E-156 T 23-04-2016 CFF04554_RS01735 53b0f895ede4a979d0219d6d6bcd5889 552 PANTHER PTHR10283:SF82 234 551 1.7E-156 T 23-04-2016 CFF04554_RS01735 53b0f895ede4a979d0219d6d6bcd5889 552 PANTHER PTHR10283:SF82 59 182 1.7E-156 T 23-04-2016 CFF04554_RS01735 53b0f895ede4a979d0219d6d6bcd5889 552 Pfam PF00939 Sodium:sulfate symporter transmembrane region 59 542 5.9E-84 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 SUPERFAMILY SSF56931 102 337 1.96E-78 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 PANTHER PTHR40457 99 339 1.7E-53 T 23-04-2016 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 Gene3D G3DSA:2.40.230.10 98 337 9.7E-82 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 217 2.5E-44 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 PRINTS PR01486 Bacterial phospholipase A1 protein signature 131 148 2.5E-44 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 PRINTS PR01486 Bacterial phospholipase A1 protein signature 287 304 2.5E-44 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 PRINTS PR01486 Bacterial phospholipase A1 protein signature 310 330 2.5E-44 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 PRINTS PR01486 Bacterial phospholipase A1 protein signature 174 193 2.5E-44 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 PRINTS PR01486 Bacterial phospholipase A1 protein signature 218 236 2.5E-44 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 PRINTS PR01486 Bacterial phospholipase A1 protein signature 251 269 2.5E-44 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 PRINTS PR01486 Bacterial phospholipase A1 protein signature 153 169 2.5E-44 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS00985 ae3d5fa6053998b415e864c9ed3df66e 340 Pfam PF02253 Phospholipase A1 99 336 1.8E-81 T 23-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CFF04554_RS05795 3bfabbde79f8539568fc545aceadba58 339 PANTHER PTHR30307 6 339 9.9E-107 T 23-04-2016 CFF04554_RS05795 3bfabbde79f8539568fc545aceadba58 339 SUPERFAMILY SSF111337 8 339 2.22E-104 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS05795 3bfabbde79f8539568fc545aceadba58 339 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 6 339 1.4E-112 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS05795 3bfabbde79f8539568fc545aceadba58 339 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 5 339 35.941 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS05795 3bfabbde79f8539568fc545aceadba58 339 Pfam PF02547 Queuosine biosynthesis protein 7 338 5.9E-101 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS05795 3bfabbde79f8539568fc545aceadba58 339 PANTHER PTHR30307:SF0 6 339 9.9E-107 T 23-04-2016 CFF04554_RS05795 3bfabbde79f8539568fc545aceadba58 339 Gene3D G3DSA:3.40.1780.10 185 339 4.2E-69 T 23-04-2016 CFF04554_RS05795 3bfabbde79f8539568fc545aceadba58 339 Gene3D G3DSA:3.40.1780.10 6 65 4.2E-69 T 23-04-2016 CFF04554_RS05795 3bfabbde79f8539568fc545aceadba58 339 Gene3D G3DSA:2.40.10.240 67 139 4.6E-17 T 23-04-2016 CFF04554_RS04865 85f18caabc48ff6d316975319086eed4 367 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 21 366 1.0E-125 T 23-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CFF04554_RS04865 85f18caabc48ff6d316975319086eed4 367 PANTHER PTHR11061:SF25 21 366 3.4E-87 T 23-04-2016 CFF04554_RS04865 85f18caabc48ff6d316975319086eed4 367 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 15 367 37.489 T 23-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CFF04554_RS04865 85f18caabc48ff6d316975319086eed4 367 PANTHER PTHR11061 21 366 3.4E-87 T 23-04-2016 CFF04554_RS04865 85f18caabc48ff6d316975319086eed4 367 SUPERFAMILY SSF53335 4 366 5.58E-49 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04865 85f18caabc48ff6d316975319086eed4 367 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 300 329 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site CFF04554_RS04865 85f18caabc48ff6d316975319086eed4 367 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 21 366 8.4E-125 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CFF04554_RS04865 85f18caabc48ff6d316975319086eed4 367 Gene3D G3DSA:3.40.50.150 159 365 1.4E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08415 8ca4d8843c18a3b54e4cab478c93149d 435 Pfam PF04055 Radical SAM superfamily 51 211 4.2E-11 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS08415 8ca4d8843c18a3b54e4cab478c93149d 435 SMART SM00729 45 257 4.6E-22 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS08415 8ca4d8843c18a3b54e4cab478c93149d 435 PANTHER PTHR13932 19 417 4.6E-75 T 23-04-2016 CFF04554_RS08415 8ca4d8843c18a3b54e4cab478c93149d 435 SUPERFAMILY SSF102114 36 407 8.89E-58 T 23-04-2016 CFF04554_RS08415 8ca4d8843c18a3b54e4cab478c93149d 435 PANTHER PTHR13932:SF5 19 417 4.6E-75 T 23-04-2016 CFF04554_RS08415 8ca4d8843c18a3b54e4cab478c93149d 435 Gene3D G3DSA:3.80.30.20 46 264 5.7E-21 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 Pfam PF00905 Penicillin binding protein transpeptidase domain 317 589 1.3E-32 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 SUPERFAMILY SSF53955 36 246 3.37E-70 T 23-04-2016 IPR023346 Lysozyme-like domain CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 60 593 1.3E-179 T 23-04-2016 CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 Pfam PF00912 Transglycosylase 51 224 1.3E-59 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 Gene3D G3DSA:3.40.710.10 228 615 1.8E-107 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 PANTHER PTHR32282:SF5 4 609 9.6E-187 T 23-04-2016 CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 PANTHER PTHR32282 4 609 9.6E-187 T 23-04-2016 CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 SUPERFAMILY SSF56601 206 228 1.82E-104 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 SUPERFAMILY SSF56601 256 616 1.82E-104 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS05115 92f43d27e1fdd6115ef90d94f816e520 645 Gene3D G3DSA:1.10.3810.10 54 227 4.4E-67 T 23-04-2016 CFF04554_RS06115 420fd7ccd0fe51ff78166d19fd8235c2 198 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 195 25.802 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CFF04554_RS06115 420fd7ccd0fe51ff78166d19fd8235c2 198 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 6.2E-52 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CFF04554_RS06115 420fd7ccd0fe51ff78166d19fd8235c2 198 Gene3D G3DSA:3.40.50.300 5 193 2.7E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06115 420fd7ccd0fe51ff78166d19fd8235c2 198 SUPERFAMILY SSF52540 4 193 8.36E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06115 420fd7ccd0fe51ff78166d19fd8235c2 198 PANTHER PTHR11649 1 193 7.0E-33 T 23-04-2016 CFF04554_RS06115 420fd7ccd0fe51ff78166d19fd8235c2 198 Pfam PF01926 50S ribosome-binding GTPase 26 151 5.5E-19 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS04600 3b33dfcfe401a5be666843e494223c80 125 PANTHER PTHR33221 3 80 1.0E-20 T 23-04-2016 CFF04554_RS04600 3b33dfcfe401a5be666843e494223c80 125 Gene3D G3DSA:1.10.10.10 11 105 5.8E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS04600 3b33dfcfe401a5be666843e494223c80 125 PANTHER PTHR33221:SF1 3 80 1.0E-20 T 23-04-2016 CFF04554_RS04600 3b33dfcfe401a5be666843e494223c80 125 Pfam PF02082 Transcriptional regulator 3 71 3.9E-19 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CFF04554_RS04600 3b33dfcfe401a5be666843e494223c80 125 SUPERFAMILY SSF46785 10 110 4.88E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS04600 3b33dfcfe401a5be666843e494223c80 125 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 87 6.1E-23 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 459 502 1.3E-9 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 Gene3D G3DSA:3.60.15.10 103 354 2.6E-76 T 23-04-2016 IPR001279 Metallo-beta-lactamase CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 PANTHER PTHR11203:SF22 98 650 6.1E-191 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 Hamap MF_01491 Ribonuclease J [rnj]. 101 653 41.724 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 PANTHER PTHR11203 98 650 6.1E-191 T 23-04-2016 CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 SMART SM00849 118 314 8.0E-21 T 23-04-2016 IPR001279 Metallo-beta-lactamase CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 106 650 2.7E-191 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 463 491 - T 23-04-2016 IPR001587 Ribonuclease J, conserved site CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 SUPERFAMILY SSF56281 106 522 4.37E-91 T 23-04-2016 IPR001279 Metallo-beta-lactamase CFF04554_RS09075 946c931096650bbe64393e25477d96c4 653 Pfam PF00753 Metallo-beta-lactamase superfamily 115 273 7.7E-17 T 23-04-2016 IPR001279 Metallo-beta-lactamase CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 SUPERFAMILY SSF51621 3 75 5.23E-93 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 SUPERFAMILY SSF51621 158 342 5.23E-93 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 Gene3D G3DSA:3.40.1380.20 329 467 4.0E-29 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 Gene3D G3DSA:3.20.20.60 170 328 1.5E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 Gene3D G3DSA:3.20.20.60 4 73 1.5E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 SUPERFAMILY SSF52935 326 468 6.28E-26 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 SUPERFAMILY SSF50800 71 169 7.15E-21 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 Gene3D G3DSA:2.40.33.10 74 169 7.4E-21 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 Pfam PF00224 Pyruvate kinase, barrel domain 3 339 6.8E-121 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.3E-25 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 PRINTS PR01050 Pyruvate kinase family signature 188 202 3.5E-57 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 PRINTS PR01050 Pyruvate kinase family signature 60 76 3.5E-57 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 PRINTS PR01050 Pyruvate kinase family signature 218 244 3.5E-57 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 PRINTS PR01050 Pyruvate kinase family signature 314 330 3.5E-57 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 PRINTS PR01050 Pyruvate kinase family signature 270 294 3.5E-57 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 PRINTS PR01050 Pyruvate kinase family signature 245 269 3.5E-57 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 PRINTS PR01050 Pyruvate kinase family signature 295 313 3.5E-57 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 467 8.1E-146 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03120 ea1889e89e523854aed4b7cb910b333f 481 PANTHER PTHR11817 4 476 1.9E-193 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CFF04554_RS03925 60a8c8c2f20f849a9d41ee2ebdb770d7 181 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 79 3.2E-16 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CFF04554_RS03925 60a8c8c2f20f849a9d41ee2ebdb770d7 181 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 179 8.6E-48 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CFF04554_RS03925 60a8c8c2f20f849a9d41ee2ebdb770d7 181 PANTHER PTHR14269 3 178 1.3E-38 T 23-04-2016 CFF04554_RS03925 60a8c8c2f20f849a9d41ee2ebdb770d7 181 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CFF04554_RS03925 60a8c8c2f20f849a9d41ee2ebdb770d7 181 PIRSF PIRSF000847 1 181 1.3E-46 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CFF04554_RS05940 7a84d3288fbdfafa00680405ab34d44c 210 Gene3D G3DSA:3.30.420.40 1 57 6.3E-24 T 23-04-2016 CFF04554_RS05940 7a84d3288fbdfafa00680405ab34d44c 210 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 204 14.854 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CFF04554_RS05940 7a84d3288fbdfafa00680405ab34d44c 210 Gene3D G3DSA:3.30.420.40 63 205 1.8E-38 T 23-04-2016 CFF04554_RS05940 7a84d3288fbdfafa00680405ab34d44c 210 SUPERFAMILY SSF53067 84 204 2.03E-28 T 23-04-2016 CFF04554_RS05940 7a84d3288fbdfafa00680405ab34d44c 210 PANTHER PTHR34265 50 207 3.3E-14 T 23-04-2016 CFF04554_RS05940 7a84d3288fbdfafa00680405ab34d44c 210 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 200 2.4E-26 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CFF04554_RS05940 7a84d3288fbdfafa00680405ab34d44c 210 Pfam PF03309 Type III pantothenate kinase 52 162 4.9E-16 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CFF04554_RS05940 7a84d3288fbdfafa00680405ab34d44c 210 SUPERFAMILY SSF53067 1 81 4.27E-29 T 23-04-2016 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 PANTHER PTHR11649:SF5 1 449 2.0E-105 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 Gene3D G3DSA:3.40.50.300 3 162 5.1E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 Gene3D G3DSA:3.30.300.20 377 453 4.5E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 371 449 5.5E-26 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 Hamap MF_00195 GTPase Der [der]. 1 454 32.654 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 195 361 3.6E-29 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 155 3.7E-24 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 Gene3D G3DSA:3.40.50.300 195 376 4.8E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 SUPERFAMILY SSF52540 162 453 2.74E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 Pfam PF01926 50S ribosome-binding GTPase 3 117 3.5E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 Pfam PF01926 50S ribosome-binding GTPase 199 316 6.4E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 SUPERFAMILY SSF52540 3 174 2.7E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 448 3.0E-143 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 5.0E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 5.0E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 PIRSF PIRSF006485 1 459 6.5E-144 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 CFF04554_RS06840 9db6f03df06942d9ea06ff66bdcc5822 463 PANTHER PTHR11649 1 449 2.0E-105 T 23-04-2016 CFF04554_RS05785 94101a0a4030cf38ea7c0bd6d18664cd 151 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 79 2.6E-17 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CFF04554_RS05785 94101a0a4030cf38ea7c0bd6d18664cd 151 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 150 14.076 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CFF04554_RS05785 94101a0a4030cf38ea7c0bd6d18664cd 151 Pfam PF02416 mttA/Hcf106 family 4 52 2.5E-6 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CFF04554_RS05785 94101a0a4030cf38ea7c0bd6d18664cd 151 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 8.7E-11 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CFF04554_RS05785 94101a0a4030cf38ea7c0bd6d18664cd 151 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 8.7E-11 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CFF04554_RS05785 94101a0a4030cf38ea7c0bd6d18664cd 151 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 8.7E-11 T 23-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CFF04554_RS05170 f752894dc93a98dc35cc5af42862b1dc 376 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 32 191 4.0E-35 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 CFF04554_RS05170 f752894dc93a98dc35cc5af42862b1dc 376 PANTHER PTHR23417 2 123 4.7E-36 T 23-04-2016 CFF04554_RS05170 f752894dc93a98dc35cc5af42862b1dc 376 PANTHER PTHR23417 172 336 4.7E-36 T 23-04-2016 CFF04554_RS05170 f752894dc93a98dc35cc5af42862b1dc 376 PANTHER PTHR23417:SF2 172 336 4.7E-36 T 23-04-2016 CFF04554_RS05170 f752894dc93a98dc35cc5af42862b1dc 376 PANTHER PTHR23417:SF2 2 123 4.7E-36 T 23-04-2016 CFF04554_RS05170 f752894dc93a98dc35cc5af42862b1dc 376 SUPERFAMILY SSF53756 112 320 1.26E-7 T 23-04-2016 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 PANTHER PTHR11831:SF4 1 208 1.1E-78 T 23-04-2016 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 Gene3D G3DSA:3.10.290.10 105 193 8.4E-32 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 PANTHER PTHR11831 1 208 1.1E-78 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 Pfam PF01479 S4 domain 98 145 2.8E-21 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.958 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 2.7E-82 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 SUPERFAMILY SSF55174 2 208 1.44E-69 T 23-04-2016 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 Gene3D G3DSA:1.10.1050.10 1 104 1.9E-41 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 1.2E-25 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 SMART SM01390 3 97 6.4E-45 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CFF04554_RS00290 a147b1502e242efb5b2b6a6c23e6ef71 208 SMART SM00363 98 162 4.8E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS00800 a60a49e488dca58bc7c7b227b30cec74 163 PIRSF PIRSF000216 1 163 3.4E-41 T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 CFF04554_RS00800 a60a49e488dca58bc7c7b227b30cec74 163 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 14 156 8.1E-40 T 23-04-2016 CFF04554_RS00800 a60a49e488dca58bc7c7b227b30cec74 163 PANTHER PTHR10371 1 160 1.2E-37 T 23-04-2016 CFF04554_RS00800 a60a49e488dca58bc7c7b227b30cec74 163 Gene3D G3DSA:3.40.30.10 79 141 1.4E-4 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS00800 a60a49e488dca58bc7c7b227b30cec74 163 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 114 132 - T 23-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 CFF04554_RS00800 a60a49e488dca58bc7c7b227b30cec74 163 SUPERFAMILY SSF52833 5 159 2.68E-34 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS00800 a60a49e488dca58bc7c7b227b30cec74 163 PANTHER PTHR10371:SF3 1 160 1.2E-37 T 23-04-2016 CFF04554_RS05460 2394c55ccdb958f249693b235fd1c227 280 SUPERFAMILY SSF161098 3 270 3.18E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS05460 2394c55ccdb958f249693b235fd1c227 280 Gene3D G3DSA:1.10.3720.10 11 278 4.4E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS05460 2394c55ccdb958f249693b235fd1c227 280 PANTHER PTHR30193 1 267 4.3E-43 T 23-04-2016 CFF04554_RS05460 2394c55ccdb958f249693b235fd1c227 280 PANTHER PTHR30193:SF20 1 267 4.3E-43 T 23-04-2016 CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 390 1.0E-75 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 PANTHER PTHR30033 1 617 1.6E-66 T 23-04-2016 CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 562 615 2.8E-12 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 SUPERFAMILY SSF64518 495 613 5.62E-8 T 23-04-2016 CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 SUPERFAMILY SSF64518 142 307 5.62E-8 T 23-04-2016 CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 SUPERFAMILY SSF64518 374 427 5.62E-8 T 23-04-2016 CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 PANTHER PTHR30033:SF1 1 617 1.6E-66 T 23-04-2016 CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 3.4E-8 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 PRINTS PR01005 Flagellar hook-associated protein signature 159 183 3.4E-8 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CFF04554_RS00500 a8cece02ee71850b6b2f6613fba53add 617 PRINTS PR01005 Flagellar hook-associated protein signature 51 73 3.4E-8 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CFF04554_RS02185 68d551f62bb38b1713b2f675a8173764 692 Gene3D G3DSA:3.40.50.300 163 201 5.1E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02185 68d551f62bb38b1713b2f675a8173764 692 Gene3D G3DSA:3.40.50.300 256 399 5.1E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02185 68d551f62bb38b1713b2f675a8173764 692 PANTHER PTHR11649 122 209 5.2E-15 T 23-04-2016 CFF04554_RS02185 68d551f62bb38b1713b2f675a8173764 692 PANTHER PTHR11649 266 398 5.2E-15 T 23-04-2016 CFF04554_RS02185 68d551f62bb38b1713b2f675a8173764 692 Pfam PF00350 Dynamin family 169 339 2.1E-26 T 23-04-2016 IPR022812 Dynamin superfamily CFF04554_RS02185 68d551f62bb38b1713b2f675a8173764 692 SUPERFAMILY SSF52540 159 400 3.36E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00710 c4431065dd60b7688cc23628ead19056 158 PANTHER PTHR22960 1 156 3.6E-82 T 23-04-2016 CFF04554_RS00710 c4431065dd60b7688cc23628ead19056 158 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 2 150 6.0E-53 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 CFF04554_RS00710 c4431065dd60b7688cc23628ead19056 158 Gene3D G3DSA:3.30.70.640 2 156 6.6E-59 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CFF04554_RS00710 c4431065dd60b7688cc23628ead19056 158 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 156 31.724 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 CFF04554_RS00710 c4431065dd60b7688cc23628ead19056 158 SUPERFAMILY SSF55040 11 153 7.32E-53 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CFF04554_RS00710 c4431065dd60b7688cc23628ead19056 158 Pfam PF01967 MoaC family 13 148 1.5E-49 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CFF04554_RS05620 f5af3bbbe9913c1c9aa239b264a32075 311 Pfam PF05125 Phage major capsid protein, P2 family 15 190 1.1E-5 T 23-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CFF04554_RS05620 f5af3bbbe9913c1c9aa239b264a32075 311 SUPERFAMILY SSF56563 25 297 2.48E-10 T 23-04-2016 CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 SUPERFAMILY SSF48403 175 358 4.97E-29 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 Pfam PF12796 Ankyrin repeats (3 copies) 189 274 5.5E-12 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 Gene3D G3DSA:1.25.40.20 177 361 1.9E-26 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 SMART SM00248 213 240 33.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 SMART SM00248 303 332 0.088 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 SMART SM00248 182 212 360.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 SMART SM00248 336 365 1300.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 SMART SM00248 244 273 1.1E-4 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 PANTHER PTHR24198 300 356 1.1E-23 T 23-04-2016 CFF04554_RS04875 4d9184813a852e8186a7e35ebe700bc2 369 PANTHER PTHR24198 178 273 1.1E-23 T 23-04-2016 CFF04554_RS03635 13af3dc64969478dfb6fef00b6a56e25 274 Gene3D G3DSA:1.10.3470.10 54 230 2.0E-9 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS03635 13af3dc64969478dfb6fef00b6a56e25 274 Pfam PF00950 ABC 3 transport family 10 264 6.9E-67 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 CFF04554_RS03635 13af3dc64969478dfb6fef00b6a56e25 274 SUPERFAMILY SSF81345 3 261 5.62E-30 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS03635 13af3dc64969478dfb6fef00b6a56e25 274 PANTHER PTHR30477 1 266 4.0E-72 T 23-04-2016 CFF04554_RS03635 13af3dc64969478dfb6fef00b6a56e25 274 PANTHER PTHR30477:SF13 1 266 4.0E-72 T 23-04-2016 CFF04554_RS01055 2635df125903be0aaaa0892849b7fa90 417 PANTHER PTHR11119 17 410 1.7E-151 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS01055 2635df125903be0aaaa0892849b7fa90 417 PANTHER PTHR11119:SF49 17 410 1.7E-151 T 23-04-2016 CFF04554_RS01055 2635df125903be0aaaa0892849b7fa90 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 16 404 2.4E-109 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 CFF04554_RS01055 2635df125903be0aaaa0892849b7fa90 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 328 348 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 CFF04554_RS01055 2635df125903be0aaaa0892849b7fa90 417 Pfam PF00860 Permease family 17 380 5.5E-86 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS01390 7ea34464d69385cf39942f0aef58ccb0 326 PANTHER PTHR30472:SF34 5 324 1.1E-93 T 23-04-2016 CFF04554_RS01390 7ea34464d69385cf39942f0aef58ccb0 326 SUPERFAMILY SSF81345 4 324 4.05E-72 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS01390 7ea34464d69385cf39942f0aef58ccb0 326 Pfam PF01032 FecCD transport family 12 323 5.2E-80 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CFF04554_RS01390 7ea34464d69385cf39942f0aef58ccb0 326 PANTHER PTHR30472 5 324 1.1E-93 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CFF04554_RS01390 7ea34464d69385cf39942f0aef58ccb0 326 Gene3D G3DSA:1.10.3470.10 3 325 2.8E-92 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 PANTHER PTHR21666 61 403 1.6E-46 T 23-04-2016 CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 SMART SM00257 308 349 1.5E-4 T 23-04-2016 IPR018392 LysM domain CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 SMART SM00257 360 403 8.2E-12 T 23-04-2016 IPR018392 LysM domain CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 Pfam PF01476 LysM domain 361 403 5.4E-13 T 23-04-2016 IPR018392 LysM domain CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 Pfam PF01476 LysM domain 309 349 6.3E-7 T 23-04-2016 IPR018392 LysM domain CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 Pfam PF01464 Transglycosylase SLT domain 86 185 6.6E-27 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 Gene3D G3DSA:1.10.530.10 74 216 2.5E-36 T 23-04-2016 CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 SUPERFAMILY SSF54106 307 349 6.8E-6 T 23-04-2016 IPR018392 LysM domain CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 PANTHER PTHR21666:SF219 61 403 1.6E-46 T 23-04-2016 CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 Gene3D G3DSA:3.10.350.10 305 350 1.4E-8 T 23-04-2016 IPR018392 LysM domain CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 Gene3D G3DSA:3.10.350.10 361 404 2.3E-16 T 23-04-2016 IPR018392 LysM domain CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 SUPERFAMILY SSF53955 73 214 4.95E-30 T 23-04-2016 IPR023346 Lysozyme-like domain CFF04554_RS06145 d0e42f8cfa347bfa76b1e1e1c226dadc 404 SUPERFAMILY SSF54106 360 403 3.79E-10 T 23-04-2016 IPR018392 LysM domain CFF04554_RS05215 5f06cdf8cc6bc447485b19f835b0c502 259 PANTHER PTHR21039 2 257 4.5E-51 T 23-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 CFF04554_RS05215 5f06cdf8cc6bc447485b19f835b0c502 259 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 3 235 6.2E-49 T 23-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 CFF04554_RS05215 5f06cdf8cc6bc447485b19f835b0c502 259 Pfam PF02811 PHP domain 4 188 3.5E-9 T 23-04-2016 IPR004013 PHP domain GO:0003824 CFF04554_RS05215 5f06cdf8cc6bc447485b19f835b0c502 259 Gene3D G3DSA:3.20.20.140 1 256 2.5E-45 T 23-04-2016 CFF04554_RS05215 5f06cdf8cc6bc447485b19f835b0c502 259 SUPERFAMILY SSF89550 1 259 4.45E-52 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CFF04554_RS05955 d5adf796753617419ae20bc65f8e5634 369 Pfam PF00149 Calcineurin-like phosphoesterase 147 309 8.9E-17 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CFF04554_RS05955 d5adf796753617419ae20bc65f8e5634 369 Gene3D G3DSA:3.60.21.10 146 319 4.2E-27 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS05955 d5adf796753617419ae20bc65f8e5634 369 PANTHER PTHR31302 39 369 7.5E-68 T 23-04-2016 CFF04554_RS05955 d5adf796753617419ae20bc65f8e5634 369 PANTHER PTHR31302:SF7 39 369 7.5E-68 T 23-04-2016 CFF04554_RS05955 d5adf796753617419ae20bc65f8e5634 369 SUPERFAMILY SSF56300 148 366 2.62E-40 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS08335 c98a8610044fda9051d422090f6da24b 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 128 3.5E-23 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CFF04554_RS08335 c98a8610044fda9051d422090f6da24b 129 PANTHER PTHR30558 10 129 2.2E-20 T 23-04-2016 CFF04554_RS08335 c98a8610044fda9051d422090f6da24b 129 TIGRFAM TIGR02804 ExbD_2: TonB system transport protein ExbD 7 127 5.1E-47 T 23-04-2016 IPR014171 TonB system transport protein ExbD type-2 GO:0006810|GO:0016020 CFF04554_RS08335 c98a8610044fda9051d422090f6da24b 129 PANTHER PTHR30558:SF3 10 129 2.2E-20 T 23-04-2016 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 PANTHER PTHR11606 5 454 4.9E-217 T 23-04-2016 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 PIRSF PIRSF000185 22 454 9.8E-101 T 23-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 SMART SM00839 204 452 3.0E-76 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 Gene3D G3DSA:3.40.192.10 65 188 8.8E-55 T 23-04-2016 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 PANTHER PTHR11606:SF4 5 454 4.9E-217 T 23-04-2016 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 Gene3D G3DSA:1.10.285.10 379 453 9.1E-25 T 23-04-2016 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 Gene3D G3DSA:1.10.285.10 5 64 1.2E-13 T 23-04-2016 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 SUPERFAMILY SSF51735 202 453 4.24E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 Gene3D G3DSA:3.40.50.720 209 378 1.6E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 6.5E-28 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 378 389 6.5E-28 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 6.5E-28 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 6.5E-28 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 SUPERFAMILY SSF53223 6 196 9.28E-65 T 23-04-2016 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 452 3.0E-76 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 CFF04554_RS07910 e77f8f8478e2162defbdcce482bf0514 454 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 185 1.3E-43 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 CFF04554_RS02170 3b74e946125f9c3c9a4aa954c5828daa 215 SUPERFAMILY SSF158442 24 151 3.92E-28 T 23-04-2016 CFF04554_RS02170 3b74e946125f9c3c9a4aa954c5828daa 215 SUPERFAMILY SSF158442 179 205 3.92E-28 T 23-04-2016 CFF04554_RS02170 3b74e946125f9c3c9a4aa954c5828daa 215 Gene3D G3DSA:1.20.1550.10 15 214 5.5E-58 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain CFF04554_RS02170 3b74e946125f9c3c9a4aa954c5828daa 215 PANTHER PTHR36570 1 150 2.8E-70 T 23-04-2016 CFF04554_RS02170 3b74e946125f9c3c9a4aa954c5828daa 215 PANTHER PTHR36570 180 214 2.8E-70 T 23-04-2016 CFF04554_RS02170 3b74e946125f9c3c9a4aa954c5828daa 215 Pfam PF02600 Disulfide bond formation protein DsbB 22 203 1.5E-38 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CFF04554_RS02170 3b74e946125f9c3c9a4aa954c5828daa 215 PANTHER PTHR36570:SF1 1 150 2.8E-70 T 23-04-2016 CFF04554_RS02170 3b74e946125f9c3c9a4aa954c5828daa 215 PANTHER PTHR36570:SF1 180 214 2.8E-70 T 23-04-2016 CFF04554_RS05325 732fc421dc25be033d473fb7fe4c6a46 196 PANTHER PTHR11935 9 194 5.3E-39 T 23-04-2016 CFF04554_RS05325 732fc421dc25be033d473fb7fe4c6a46 196 SMART SM00849 12 176 1.3E-32 T 23-04-2016 IPR001279 Metallo-beta-lactamase CFF04554_RS05325 732fc421dc25be033d473fb7fe4c6a46 196 Pfam PF00753 Metallo-beta-lactamase superfamily 13 176 1.2E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase CFF04554_RS05325 732fc421dc25be033d473fb7fe4c6a46 196 SUPERFAMILY SSF56281 9 189 6.09E-42 T 23-04-2016 IPR001279 Metallo-beta-lactamase CFF04554_RS05325 732fc421dc25be033d473fb7fe4c6a46 196 Gene3D G3DSA:3.60.15.10 9 192 1.9E-38 T 23-04-2016 IPR001279 Metallo-beta-lactamase CFF04554_RS03410 1d3d8f90271fdd498c35f22ee8bb9ee0 238 PANTHER PTHR21367:SF0 13 224 7.8E-33 T 23-04-2016 CFF04554_RS03410 1d3d8f90271fdd498c35f22ee8bb9ee0 238 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 13 80 4.1E-13 T 23-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 CFF04554_RS03410 1d3d8f90271fdd498c35f22ee8bb9ee0 238 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 101 224 5.0E-29 T 23-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 CFF04554_RS03410 1d3d8f90271fdd498c35f22ee8bb9ee0 238 PIRSF PIRSF037208 2 237 8.4E-67 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic CFF04554_RS03410 1d3d8f90271fdd498c35f22ee8bb9ee0 238 PANTHER PTHR21367 13 224 7.8E-33 T 23-04-2016 IPR030700 Arginine-tRNA-protein transferase CFF04554_RS03410 1d3d8f90271fdd498c35f22ee8bb9ee0 238 SUPERFAMILY SSF55729 68 219 1.27E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS08680 50f8f594ca761940837453f8a77aa9a1 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 243 6.3E-26 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS08680 50f8f594ca761940837453f8a77aa9a1 252 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 251 7.1E-84 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CFF04554_RS08680 50f8f594ca761940837453f8a77aa9a1 252 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 23-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CFF04554_RS08680 50f8f594ca761940837453f8a77aa9a1 252 Gene3D G3DSA:3.60.10.10 1 251 6.5E-86 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS08680 50f8f594ca761940837453f8a77aa9a1 252 PANTHER PTHR22748 1 252 4.6E-99 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CFF04554_RS08680 50f8f594ca761940837453f8a77aa9a1 252 SUPERFAMILY SSF56219 1 252 7.33E-73 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS08680 50f8f594ca761940837453f8a77aa9a1 252 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 250 1.0E-79 T 23-04-2016 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 311 340 1.2E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 208 237 1.2E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 282 309 1.2E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 SUPERFAMILY SSF58104 84 115 3.79E-53 T 23-04-2016 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 SUPERFAMILY SSF58104 204 403 3.79E-53 T 23-04-2016 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 261 336 9.1E-32 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 PANTHER PTHR32089:SF1 194 395 3.1E-49 T 23-04-2016 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 PANTHER PTHR32089:SF1 7 95 3.1E-49 T 23-04-2016 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 Gene3D G3DSA:1.10.287.950 205 400 2.1E-46 T 23-04-2016 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 SMART SM00283 201 403 2.5E-32 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 PANTHER PTHR32089 194 395 3.1E-49 T 23-04-2016 CFF04554_RS09390 5038505ba3aa2bef3836c4dbf97c6aba 404 PANTHER PTHR32089 7 95 3.1E-49 T 23-04-2016 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 367 1.6E-148 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 Pfam PF01926 50S ribosome-binding GTPase 5 124 2.6E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 PIRSF PIRSF006641 1 367 1.2E-157 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 4.0E-40 T 23-04-2016 IPR013029 Domain of unknown function DUF933 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 8.0E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 8.0E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 8.0E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 8.0E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 Gene3D G3DSA:1.10.150.300 132 203 3.2E-22 T 23-04-2016 IPR023192 TGS-like domain CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 42.274 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 SUPERFAMILY SSF52540 4 305 6.65E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 SUPERFAMILY SSF81271 283 364 2.14E-36 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 Gene3D G3DSA:3.40.50.300 204 270 1.0E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 Gene3D G3DSA:3.40.50.300 4 131 1.0E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 Gene3D G3DSA:3.10.20.30 271 367 1.1E-48 T 23-04-2016 IPR012675 Beta-grasp domain CFF04554_RS06020 4365c4e7c347a93143996ebb13dab7ed 367 PANTHER PTHR23305 1 367 1.8E-189 T 23-04-2016 CFF04554_RS06370 55e7a97f75564b69ad195600f79bbff4 426 Pfam PF00266 Aminotransferase class-V 108 414 2.6E-37 T 23-04-2016 IPR000192 Aminotransferase class V domain CFF04554_RS06370 55e7a97f75564b69ad195600f79bbff4 426 Gene3D G3DSA:3.90.1150.10 292 423 8.0E-28 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS06370 55e7a97f75564b69ad195600f79bbff4 426 PANTHER PTHR11601:SF24 17 102 2.3E-104 T 23-04-2016 CFF04554_RS06370 55e7a97f75564b69ad195600f79bbff4 426 PANTHER PTHR11601:SF24 119 419 2.3E-104 T 23-04-2016 CFF04554_RS06370 55e7a97f75564b69ad195600f79bbff4 426 PANTHER PTHR11601 17 102 2.3E-104 T 23-04-2016 CFF04554_RS06370 55e7a97f75564b69ad195600f79bbff4 426 PANTHER PTHR11601 119 419 2.3E-104 T 23-04-2016 CFF04554_RS06370 55e7a97f75564b69ad195600f79bbff4 426 SUPERFAMILY SSF53383 3 424 1.46E-65 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS06370 55e7a97f75564b69ad195600f79bbff4 426 Gene3D G3DSA:3.40.640.10 32 291 1.6E-41 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 SUPERFAMILY SSF46785 551 599 1.5E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 Gene3D G3DSA:2.40.30.10 183 260 1.4E-17 T 23-04-2016 CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 Gene3D G3DSA:3.40.50.300 3 182 8.3E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 SUPERFAMILY SSF50447 173 263 3.14E-16 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 599 5.6E-86 T 23-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 Pfam PF09107 Elongation factor SelB, winged helix 555 599 1.1E-11 T 23-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 Pfam PF00009 Elongation factor Tu GTP binding domain 3 157 2.2E-27 T 23-04-2016 CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 159 4.1E-16 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 SUPERFAMILY SSF52540 4 193 8.77E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 PANTHER PTHR23115 2 262 1.7E-80 T 23-04-2016 CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 PANTHER PTHR23115:SF129 2 262 1.7E-80 T 23-04-2016 CFF04554_RS07870 6079041449444e1f4a609d10de0069ce 601 Gene3D G3DSA:1.10.10.10 544 600 4.7E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS05140 f4fc1220988aa5f612c0da100b91ef30 81 Gene3D G3DSA:3.30.300.120 23 60 1.0E-5 T 23-04-2016 CFF04554_RS05140 f4fc1220988aa5f612c0da100b91ef30 81 Pfam PF13083 KH domain 3 76 2.0E-16 T 23-04-2016 CFF04554_RS00460 a04b02d10dd422cbf5fe815d4cfcad30 607 PANTHER PTHR30288:SF0 5 421 9.3E-41 T 23-04-2016 CFF04554_RS00460 a04b02d10dd422cbf5fe815d4cfcad30 607 PANTHER PTHR30288:SF0 519 605 9.3E-41 T 23-04-2016 CFF04554_RS00460 a04b02d10dd422cbf5fe815d4cfcad30 607 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 21 111 6.3E-12 T 23-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CFF04554_RS00460 a04b02d10dd422cbf5fe815d4cfcad30 607 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 266 589 7.6E-36 T 23-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CFF04554_RS00460 a04b02d10dd422cbf5fe815d4cfcad30 607 PANTHER PTHR30288 5 421 9.3E-41 T 23-04-2016 CFF04554_RS00460 a04b02d10dd422cbf5fe815d4cfcad30 607 PANTHER PTHR30288 519 605 9.3E-41 T 23-04-2016 CFF04554_RS01255 a85b55cd8044df53dacf6d5be755dff0 198 PANTHER PTHR10681:SF22 1 191 3.3E-70 T 23-04-2016 CFF04554_RS01255 a85b55cd8044df53dacf6d5be755dff0 198 Gene3D G3DSA:3.40.30.10 2 191 3.8E-60 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS01255 a85b55cd8044df53dacf6d5be755dff0 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 191 2.1E-9 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CFF04554_RS01255 a85b55cd8044df53dacf6d5be755dff0 198 PIRSF PIRSF000239 1 196 2.7E-52 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 CFF04554_RS01255 a85b55cd8044df53dacf6d5be755dff0 198 Pfam PF00578 AhpC/TSA family 5 137 1.1E-28 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CFF04554_RS01255 a85b55cd8044df53dacf6d5be755dff0 198 SUPERFAMILY SSF52833 2 192 2.74E-58 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS01255 a85b55cd8044df53dacf6d5be755dff0 198 PANTHER PTHR10681 1 191 3.3E-70 T 23-04-2016 CFF04554_RS08920 cb21dc31648ef88e429421c18e1e8dc2 327 Pfam PF02769 AIR synthase related protein, C-terminal domain 172 326 4.4E-29 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS08920 cb21dc31648ef88e429421c18e1e8dc2 327 PANTHER PTHR10520 1 327 3.2E-163 T 23-04-2016 CFF04554_RS08920 cb21dc31648ef88e429421c18e1e8dc2 327 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 158 2.7E-11 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS08920 cb21dc31648ef88e429421c18e1e8dc2 327 Gene3D G3DSA:3.90.650.10 170 325 7.7E-53 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS08920 cb21dc31648ef88e429421c18e1e8dc2 327 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 2 320 5.4E-118 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS08920 cb21dc31648ef88e429421c18e1e8dc2 327 SUPERFAMILY SSF55326 2 163 6.93E-45 T 23-04-2016 CFF04554_RS08920 cb21dc31648ef88e429421c18e1e8dc2 327 Gene3D G3DSA:3.30.1330.10 18 164 1.7E-51 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS08920 cb21dc31648ef88e429421c18e1e8dc2 327 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 327 39.908 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CFF04554_RS08920 cb21dc31648ef88e429421c18e1e8dc2 327 SUPERFAMILY SSF56042 169 325 1.05E-47 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS04015 3f5816ba87943115c482578c8c32ed24 461 Gene3D G3DSA:1.20.850.10 240 460 2.7E-61 T 23-04-2016 CFF04554_RS04015 3f5816ba87943115c482578c8c32ed24 461 Gene3D G3DSA:1.10.780.10 35 219 5.2E-21 T 23-04-2016 CFF04554_RS04015 3f5816ba87943115c482578c8c32ed24 461 Pfam PF13435 Cytochrome c554 and c-prime 104 175 0.031 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 CFF04554_RS04015 3f5816ba87943115c482578c8c32ed24 461 Pfam PF13447 Seven times multi-haem cytochrome CxxCH 208 305 9.6E-24 T 23-04-2016 CFF04554_RS04015 3f5816ba87943115c482578c8c32ed24 461 SUPERFAMILY SSF48695 2 302 2.92E-51 T 23-04-2016 IPR011031 Multihaem cytochrome CFF04554_RS04015 3f5816ba87943115c482578c8c32ed24 461 SUPERFAMILY SSF48695 349 449 2.92E-51 T 23-04-2016 IPR011031 Multihaem cytochrome CFF04554_RS03110 3e5889ea5f36eee0a9a06f08e0e9a457 450 Gene3D G3DSA:3.50.50.60 4 70 4.3E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS03110 3e5889ea5f36eee0a9a06f08e0e9a457 450 Gene3D G3DSA:3.50.50.60 127 280 4.3E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS03110 3e5889ea5f36eee0a9a06f08e0e9a457 450 PANTHER PTHR13847 5 254 1.8E-21 T 23-04-2016 CFF04554_RS03110 3e5889ea5f36eee0a9a06f08e0e9a457 450 SUPERFAMILY SSF51905 1 293 8.19E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS03110 3e5889ea5f36eee0a9a06f08e0e9a457 450 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 423 7.5E-24 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 CFF04554_RS05070 6495c2b26e0807ee82528ef164881719 204 Pfam PF01810 LysE type translocator 13 197 1.9E-18 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CFF04554_RS05070 6495c2b26e0807ee82528ef164881719 204 PANTHER PTHR30086 1 204 8.4E-26 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 PRINTS PR00125 ATP synthase delta subunit signature 82 96 6.0E-5 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 PRINTS PR00125 ATP synthase delta subunit signature 71 82 6.0E-5 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 PRINTS PR00125 ATP synthase delta subunit signature 5 24 6.0E-5 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 166 5.5E-22 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 174 12.742 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 PANTHER PTHR11910 1 172 7.6E-16 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 SUPERFAMILY SSF47928 3 96 1.18E-16 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 PANTHER PTHR11910:SF1 1 172 7.6E-16 T 23-04-2016 CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 5 152 1.5E-16 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CFF04554_RS07775 a924be27e272e6c93120d6d2ab584f82 176 Gene3D G3DSA:1.10.520.20 4 95 8.8E-17 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CFF04554_RS01455 05ef3e68ace9b132cc954a44ddd3064d 402 PANTHER PTHR11751 15 402 3.4E-197 T 23-04-2016 CFF04554_RS01455 05ef3e68ace9b132cc954a44ddd3064d 402 Gene3D G3DSA:3.40.640.10 48 267 8.3E-61 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS01455 05ef3e68ace9b132cc954a44ddd3064d 402 Gene3D G3DSA:3.90.1150.10 268 400 4.5E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS01455 05ef3e68ace9b132cc954a44ddd3064d 402 Pfam PF00155 Aminotransferase class I and II 34 392 3.6E-63 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CFF04554_RS01455 05ef3e68ace9b132cc954a44ddd3064d 402 PANTHER PTHR11751:SF302 15 402 3.4E-197 T 23-04-2016 CFF04554_RS01455 05ef3e68ace9b132cc954a44ddd3064d 402 SUPERFAMILY SSF53383 7 400 3.76E-104 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS02100 f72fe76798272c52379c4501706fa7ae 380 Gene3D G3DSA:3.30.1490.100 241 344 1.2E-4 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS02100 f72fe76798272c52379c4501706fa7ae 380 PANTHER PTHR11076 1 318 1.3E-60 T 23-04-2016 CFF04554_RS02100 f72fe76798272c52379c4501706fa7ae 380 PANTHER PTHR11076:SF12 1 318 1.3E-60 T 23-04-2016 CFF04554_RS02100 f72fe76798272c52379c4501706fa7ae 380 SUPERFAMILY SSF56672 2 231 3.47E-51 T 23-04-2016 CFF04554_RS02100 f72fe76798272c52379c4501706fa7ae 380 SUPERFAMILY SSF100879 238 337 3.14E-10 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS02100 f72fe76798272c52379c4501706fa7ae 380 Pfam PF00817 impB/mucB/samB family 5 159 2.9E-40 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CFF04554_RS02100 f72fe76798272c52379c4501706fa7ae 380 Gene3D G3DSA:3.30.70.270 73 168 4.7E-25 T 23-04-2016 CFF04554_RS02100 f72fe76798272c52379c4501706fa7ae 380 Gene3D G3DSA:1.10.150.20 175 233 5.6E-5 T 23-04-2016 CFF04554_RS02025 dd3e6c9c796f0bac2c78b18a9d12a444 1024 PANTHER PTHR30071:SF5 706 1023 1.5E-60 T 23-04-2016 CFF04554_RS02025 dd3e6c9c796f0bac2c78b18a9d12a444 1024 Pfam PF01578 Cytochrome C assembly protein 782 986 6.4E-40 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CFF04554_RS02025 dd3e6c9c796f0bac2c78b18a9d12a444 1024 Pfam PF05140 ResB-like family 323 405 1.4E-10 T 23-04-2016 IPR007816 ResB-like domain CFF04554_RS02025 dd3e6c9c796f0bac2c78b18a9d12a444 1024 Pfam PF05140 ResB-like family 73 119 9.1E-6 T 23-04-2016 IPR007816 ResB-like domain CFF04554_RS02025 dd3e6c9c796f0bac2c78b18a9d12a444 1024 PANTHER PTHR30071 706 1023 1.5E-60 T 23-04-2016 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 PANTHER PTHR21098 1 192 1.3E-45 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 188 1.4E-52 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 SUPERFAMILY SSF63380 1 83 2.98E-12 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 Pfam PF00677 Lumazine binding domain 4 69 3.6E-9 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 Pfam PF00677 Lumazine binding domain 90 174 1.2E-16 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 PANTHER PTHR21098:SF0 1 192 1.3E-45 T 23-04-2016 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 PIRSF PIRSF000498 1 202 1.0E-58 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 Gene3D G3DSA:2.40.30.20 95 185 5.6E-28 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 Gene3D G3DSA:2.40.30.20 28 94 3.6E-15 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07360 f407d4e0e7f0fc8513ccd22705995c6c 207 SUPERFAMILY SSF63380 85 186 7.57E-28 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CFF04554_RS04545 df99139908a72160295241f60c4e07a7 102 Pfam PF12838 4Fe-4S dicluster domain 17 66 1.5E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS04545 df99139908a72160295241f60c4e07a7 102 Gene3D G3DSA:3.30.70.20 13 59 4.4E-11 T 23-04-2016 CFF04554_RS04545 df99139908a72160295241f60c4e07a7 102 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 18 29 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS04545 df99139908a72160295241f60c4e07a7 102 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS04545 df99139908a72160295241f60c4e07a7 102 SUPERFAMILY SSF54862 10 81 4.19E-17 T 23-04-2016 CFF04554_RS04545 df99139908a72160295241f60c4e07a7 102 Gene3D G3DSA:3.30.70.20 60 92 1.4E-5 T 23-04-2016 CFF04554_RS03855 bc750002382fd91e4d8b354148d21755 478 SUPERFAMILY SSF116726 409 466 4.84E-8 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS03855 bc750002382fd91e4d8b354148d21755 478 Pfam PF00999 Sodium/hydrogen exchanger family 10 379 7.6E-52 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CFF04554_RS03855 bc750002382fd91e4d8b354148d21755 478 PANTHER PTHR32507:SF7 1 468 9.8E-163 T 23-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 CFF04554_RS03855 bc750002382fd91e4d8b354148d21755 478 PANTHER PTHR32507 1 468 9.8E-163 T 23-04-2016 CFF04554_RS03855 bc750002382fd91e4d8b354148d21755 478 Gene3D G3DSA:3.30.70.1450 408 466 3.7E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS03855 bc750002382fd91e4d8b354148d21755 478 Pfam PF02080 TrkA-C domain 410 466 1.6E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS01570 d6dde1aa96d3287520c65a660792a4e6 148 Pfam PF07977 FabA-like domain 11 140 4.7E-38 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CFF04554_RS01570 d6dde1aa96d3287520c65a660792a4e6 148 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 145 1.0E-56 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CFF04554_RS01570 d6dde1aa96d3287520c65a660792a4e6 148 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 147 34.48 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CFF04554_RS01570 d6dde1aa96d3287520c65a660792a4e6 148 SUPERFAMILY SSF54637 1 145 1.75E-47 T 23-04-2016 IPR029069 HotDog domain CFF04554_RS01570 d6dde1aa96d3287520c65a660792a4e6 148 Gene3D G3DSA:3.10.129.10 2 147 4.4E-55 T 23-04-2016 IPR029069 HotDog domain CFF04554_RS01570 d6dde1aa96d3287520c65a660792a4e6 148 PANTHER PTHR30272 1 148 3.9E-65 T 23-04-2016 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PANTHER PTHR12428:SF14 309 514 8.8E-83 T 23-04-2016 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 Pfam PF02096 60Kd inner membrane protein 335 514 5.8E-61 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PANTHER PTHR12428 309 514 8.8E-83 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 Pfam PF14849 YidC periplasmic domain 274 323 3.0E-11 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 8 333 6.9E-46 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 9 516 20.878 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 334 514 7.6E-69 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PRINTS PR00701 60kDa inner membrane protein signature 6 27 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PRINTS PR00701 60kDa inner membrane protein signature 480 503 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PRINTS PR00701 60kDa inner membrane protein signature 396 419 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PRINTS PR00701 60kDa inner membrane protein signature 443 465 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PRINTS PR00701 60kDa inner membrane protein signature 305 325 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PRINTS PR01900 YidC translocation/secretion protein signature 449 464 1.1E-28 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PRINTS PR01900 YidC translocation/secretion protein signature 320 336 1.1E-28 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS02745 327278075d481c6dc45133b88f08bc2d 531 PRINTS PR01900 YidC translocation/secretion protein signature 469 493 1.1E-28 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CFF04554_RS06930 53f14d79e9764a6eecd2298f779077f1 398 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 88 111 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 CFF04554_RS06930 53f14d79e9764a6eecd2298f779077f1 398 PANTHER PTHR23135:SF2 55 398 2.5E-62 T 23-04-2016 CFF04554_RS06930 53f14d79e9764a6eecd2298f779077f1 398 SUPERFAMILY SSF53244 260 397 4.21E-32 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS06930 53f14d79e9764a6eecd2298f779077f1 398 SUPERFAMILY SSF53623 84 205 8.9E-31 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS06930 53f14d79e9764a6eecd2298f779077f1 398 PANTHER PTHR23135 55 398 2.5E-62 T 23-04-2016 CFF04554_RS06930 53f14d79e9764a6eecd2298f779077f1 398 Gene3D G3DSA:3.90.190.20 260 395 4.0E-42 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CFF04554_RS06930 53f14d79e9764a6eecd2298f779077f1 398 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 6 396 5.1E-93 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CFF04554_RS06930 53f14d79e9764a6eecd2298f779077f1 398 Gene3D G3DSA:3.40.1190.10 84 203 1.1E-35 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS06930 53f14d79e9764a6eecd2298f779077f1 398 Pfam PF08245 Mur ligase middle domain 90 194 7.0E-19 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS09080 2d898fabb14aaaff564254eadc7e01e0 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 60 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CFF04554_RS09080 2d898fabb14aaaff564254eadc7e01e0 268 PANTHER PTHR11727 2 254 7.2E-48 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CFF04554_RS09080 2d898fabb14aaaff564254eadc7e01e0 268 Gene3D G3DSA:1.10.8.100 197 256 1.2E-7 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like CFF04554_RS09080 2d898fabb14aaaff564254eadc7e01e0 268 SUPERFAMILY SSF53335 1 260 9.03E-54 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS09080 2d898fabb14aaaff564254eadc7e01e0 268 Gene3D G3DSA:3.40.50.150 2 187 2.4E-50 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS09080 2d898fabb14aaaff564254eadc7e01e0 268 SMART SM00650 18 188 1.1E-43 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CFF04554_RS09080 2d898fabb14aaaff564254eadc7e01e0 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 2 255 1.4E-65 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CFF04554_RS09080 2d898fabb14aaaff564254eadc7e01e0 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 258 45.213 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CFF04554_RS09080 2d898fabb14aaaff564254eadc7e01e0 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 257 3.4E-44 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CFF04554_RS04130 33f47184d23ee97ce5370483e72406ef 162 PIRSF PIRSF029256 1 154 1.3E-58 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CFF04554_RS04130 33f47184d23ee97ce5370483e72406ef 162 PANTHER PTHR12029 1 161 1.1E-62 T 23-04-2016 CFF04554_RS04130 33f47184d23ee97ce5370483e72406ef 162 Gene3D G3DSA:3.40.1280.10 1 149 7.1E-55 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFF04554_RS04130 33f47184d23ee97ce5370483e72406ef 162 PANTHER PTHR12029:SF31 1 161 1.1E-62 T 23-04-2016 CFF04554_RS04130 33f47184d23ee97ce5370483e72406ef 162 Pfam PF00588 SpoU rRNA Methylase family 3 143 1.5E-31 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CFF04554_RS04130 33f47184d23ee97ce5370483e72406ef 162 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 31.275 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CFF04554_RS04130 33f47184d23ee97ce5370483e72406ef 162 SUPERFAMILY SSF75217 2 149 9.81E-38 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 SUPERFAMILY SSF48695 47 272 2.65E-129 T 23-04-2016 IPR011031 Multihaem cytochrome CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 SUPERFAMILY SSF48695 314 564 2.65E-129 T 23-04-2016 IPR011031 Multihaem cytochrome CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 Pfam PF02335 Cytochrome c552 54 583 3.8E-153 T 23-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 Gene3D G3DSA:1.10.780.10 255 333 2.2E-10 T 23-04-2016 CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 Gene3D G3DSA:1.10.780.10 377 414 2.2E-10 T 23-04-2016 CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 Gene3D G3DSA:1.10.780.10 143 254 2.9E-7 T 23-04-2016 CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 PANTHER PTHR30633 187 265 7.4E-70 T 23-04-2016 CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 PANTHER PTHR30633 475 601 7.4E-70 T 23-04-2016 CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 PANTHER PTHR30633 291 459 7.4E-70 T 23-04-2016 CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 PANTHER PTHR30633 4 168 7.4E-70 T 23-04-2016 CFF04554_RS06410 5270bedc53315e88178655f65a3dae3b 607 Gene3D G3DSA:1.20.140.10 415 558 3.1E-48 T 23-04-2016 CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 PANTHER PTHR30435 1 137 2.1E-94 T 23-04-2016 CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 PANTHER PTHR30435 775 897 2.1E-94 T 23-04-2016 CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 TIGRFAM TIGR02489 flgE_epsilon: flagellar hook protein FlgE 1 491 1.3E-128 T 23-04-2016 IPR012835 Flagellar hook FlgE GO:0009288|GO:0044781 CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 Pfam PF07559 Flagellar basal body protein FlaE 658 778 1.7E-10 T 23-04-2016 IPR011491 Flagellar hook protein FlgE CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 819 896 6.8E-21 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 SUPERFAMILY SSF117143 91 291 1.12E-26 T 23-04-2016 CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 Pfam PF00460 Flagella basal body rod protein 5 35 4.8E-10 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 Pfam PF07196 Flagellin hook IN motif 293 333 3.0E-5 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 540 879 1.9E-42 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 321 3.4E-37 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 PANTHER PTHR30435:SF1 1 137 2.1E-94 T 23-04-2016 CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 PANTHER PTHR30435:SF1 775 897 2.1E-94 T 23-04-2016 CFF04554_RS08895 d422b6493481d9a17d07c1ba33970da4 898 SUPERFAMILY SSF117143 543 858 3.14E-41 T 23-04-2016 CFF04554_RS03085 ba9956f536295f1a3a6fbf21d8634f0e 176 SUPERFAMILY SSF82784 12 175 3.01E-32 T 23-04-2016 IPR003718 OsmC/Ohr family CFF04554_RS03085 ba9956f536295f1a3a6fbf21d8634f0e 176 Gene3D G3DSA:3.30.300.20 13 167 4.3E-37 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CFF04554_RS03085 ba9956f536295f1a3a6fbf21d8634f0e 176 PANTHER PTHR35368:SF1 5 176 1.5E-33 T 23-04-2016 CFF04554_RS03085 ba9956f536295f1a3a6fbf21d8634f0e 176 Pfam PF02566 OsmC-like protein 69 175 3.1E-21 T 23-04-2016 IPR003718 OsmC/Ohr family CFF04554_RS03085 ba9956f536295f1a3a6fbf21d8634f0e 176 PANTHER PTHR35368 5 176 1.5E-33 T 23-04-2016 CFF04554_RS07285 96e0fc084753d0d1bdb1f17df5299d21 181 SUPERFAMILY SSF52374 3 178 4.69E-36 T 23-04-2016 CFF04554_RS07285 96e0fc084753d0d1bdb1f17df5299d21 181 PANTHER PTHR39321 1 136 3.4E-22 T 23-04-2016 CFF04554_RS07285 96e0fc084753d0d1bdb1f17df5299d21 181 Pfam PF01467 Cytidylyltransferase-like 5 156 1.5E-22 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CFF04554_RS07285 96e0fc084753d0d1bdb1f17df5299d21 181 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 178 21.491 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CFF04554_RS07285 96e0fc084753d0d1bdb1f17df5299d21 181 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 173 3.3E-39 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CFF04554_RS07285 96e0fc084753d0d1bdb1f17df5299d21 181 Gene3D G3DSA:3.40.50.620 2 173 3.4E-46 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 ProSitePatterns PS00113 Adenylate kinase signature. 83 94 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 PRINTS PR00094 Adenylate kinase signature 83 99 6.8E-22 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 PRINTS PR00094 Adenylate kinase signature 6 19 6.8E-22 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 PRINTS PR00094 Adenylate kinase signature 35 49 6.8E-22 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 PRINTS PR00094 Adenylate kinase signature 133 148 6.8E-22 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 Gene3D G3DSA:3.40.50.300 3 189 2.7E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 Hamap MF_00235 Adenylate kinase [adk]. 3 186 34.443 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 PANTHER PTHR23359 6 189 3.3E-48 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 SUPERFAMILY SSF52540 2 190 1.41E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06175 38f3a4e5c89fdc599aad1ae78a182d93 191 Pfam PF00406 Adenylate kinase 7 163 1.3E-36 T 23-04-2016 CFF04554_RS00365 3be872d280c7c16c9a30b7b6b0209da0 66 Pfam PF02597 ThiS family 9 66 7.4E-8 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CFF04554_RS00365 3be872d280c7c16c9a30b7b6b0209da0 66 PANTHER PTHR34472:SF1 1 66 7.4E-15 T 23-04-2016 CFF04554_RS00365 3be872d280c7c16c9a30b7b6b0209da0 66 SUPERFAMILY SSF54285 2 65 1.72E-14 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CFF04554_RS00365 3be872d280c7c16c9a30b7b6b0209da0 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.0E-16 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis CFF04554_RS00365 3be872d280c7c16c9a30b7b6b0209da0 66 Gene3D G3DSA:3.10.20.30 2 66 1.4E-18 T 23-04-2016 IPR012675 Beta-grasp domain CFF04554_RS00365 3be872d280c7c16c9a30b7b6b0209da0 66 PANTHER PTHR34472 1 66 7.4E-15 T 23-04-2016 CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 SUPERFAMILY SSF52540 2 250 6.66E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 PANTHER PTHR24220:SF358 4 102 3.1E-110 T 23-04-2016 CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 PANTHER PTHR24220:SF358 118 251 3.1E-110 T 23-04-2016 CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 250 1.1E-4 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 Gene3D G3DSA:3.40.50.300 2 248 1.3E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 Pfam PF00005 ABC transporter 20 178 1.9E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 SMART SM00382 27 227 7.2E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 PANTHER PTHR24220 4 102 3.1E-110 T 23-04-2016 CFF04554_RS02015 5cff2012c68b73cda290930a5ee6d58d 254 PANTHER PTHR24220 118 251 3.1E-110 T 23-04-2016 CFF04554_RS05395 b42fbc983bf142103b6c490eeccc8d57 262 Gene3D G3DSA:1.10.10.10 4 82 2.6E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS05395 b42fbc983bf142103b6c490eeccc8d57 262 SUPERFAMILY SSF46785 4 81 2.38E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS01825 c562380c771e49c6507514db45467c2c 237 Pfam PF04333 MlaA lipoprotein 35 233 3.9E-62 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CFF04554_RS01825 c562380c771e49c6507514db45467c2c 237 PRINTS PR01805 VacJ lipoprotein signature 35 48 1.4E-17 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CFF04554_RS01825 c562380c771e49c6507514db45467c2c 237 PRINTS PR01805 VacJ lipoprotein signature 140 157 1.4E-17 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CFF04554_RS01825 c562380c771e49c6507514db45467c2c 237 PRINTS PR01805 VacJ lipoprotein signature 52 68 1.4E-17 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CFF04554_RS01825 c562380c771e49c6507514db45467c2c 237 PRINTS PR01805 VacJ lipoprotein signature 103 120 1.4E-17 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CFF04554_RS01825 c562380c771e49c6507514db45467c2c 237 PANTHER PTHR30035 35 235 1.6E-35 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 CFF04554_RS06475 52dcecdc2b3a6bdb40d5c97a74e4e85b 226 Gene3D G3DSA:3.40.50.2020 99 175 2.1E-10 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS06475 52dcecdc2b3a6bdb40d5c97a74e4e85b 226 Pfam PF00156 Phosphoribosyl transferase domain 13 195 7.0E-7 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CFF04554_RS06475 52dcecdc2b3a6bdb40d5c97a74e4e85b 226 SUPERFAMILY SSF53271 8 213 2.77E-31 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS06475 52dcecdc2b3a6bdb40d5c97a74e4e85b 226 PANTHER PTHR31299 7 202 3.4E-24 T 23-04-2016 CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 Gene3D G3DSA:3.40.50.970 2 189 3.9E-70 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 SUPERFAMILY SSF52922 265 373 3.43E-25 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 PANTHER PTHR32154:SF14 213 372 7.7E-108 T 23-04-2016 CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 PANTHER PTHR32154:SF14 1 184 7.7E-108 T 23-04-2016 CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 SUPERFAMILY SSF52518 3 256 6.04E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 273 366 2.0E-22 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 Gene3D G3DSA:3.40.50.920 265 372 5.4E-23 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 240 1.1E-59 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 PANTHER PTHR32154 213 372 7.7E-108 T 23-04-2016 CFF04554_RS04540 fb99ed72e84ede39cfb4ce7f0080200c 373 PANTHER PTHR32154 1 184 7.7E-108 T 23-04-2016 CFF04554_RS05475 18ecc8fb4ad747c9a5195d69b114eb4d 214 Gene3D G3DSA:3.40.190.10 137 182 9.2E-7 T 23-04-2016 CFF04554_RS05475 18ecc8fb4ad747c9a5195d69b114eb4d 214 PANTHER PTHR30006:SF10 1 214 2.5E-41 T 23-04-2016 CFF04554_RS05475 18ecc8fb4ad747c9a5195d69b114eb4d 214 Pfam PF13343 Bacterial extracellular solute-binding protein 2 194 1.4E-31 T 23-04-2016 CFF04554_RS05475 18ecc8fb4ad747c9a5195d69b114eb4d 214 SUPERFAMILY SSF53850 1 206 2.18E-30 T 23-04-2016 CFF04554_RS05475 18ecc8fb4ad747c9a5195d69b114eb4d 214 Gene3D G3DSA:3.40.190.10 2 136 5.5E-22 T 23-04-2016 CFF04554_RS05475 18ecc8fb4ad747c9a5195d69b114eb4d 214 PANTHER PTHR30006 1 214 2.5E-41 T 23-04-2016 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 Gene3D G3DSA:1.10.287.950 165 360 4.9E-47 T 23-04-2016 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 295 1.3E-30 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 300 2.8E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 242 269 2.8E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 197 2.8E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 SMART SM00283 161 363 3.2E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 PANTHER PTHR32089 109 142 1.2E-45 T 23-04-2016 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 PANTHER PTHR32089 1 55 1.2E-45 T 23-04-2016 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 PANTHER PTHR32089 167 355 1.2E-45 T 23-04-2016 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 SUPERFAMILY SSF58104 44 75 3.79E-52 T 23-04-2016 CFF04554_RS09385 8f6c99e5e1b0db4a02aae8f01972c79e 364 SUPERFAMILY SSF58104 164 363 3.79E-52 T 23-04-2016 CFF04554_RS00100 58b2d0af276eb0cf2209b8964c822fe5 689 Gene3D G3DSA:3.20.70.20 315 684 1.6E-180 T 23-04-2016 CFF04554_RS00100 58b2d0af276eb0cf2209b8964c822fe5 689 Gene3D G3DSA:3.20.70.20 120 269 1.6E-180 T 23-04-2016 CFF04554_RS00100 58b2d0af276eb0cf2209b8964c822fe5 689 SUPERFAMILY SSF51998 116 684 1.04E-135 T 23-04-2016 CFF04554_RS00100 58b2d0af276eb0cf2209b8964c822fe5 689 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 683 2.1E-163 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CFF04554_RS00100 58b2d0af276eb0cf2209b8964c822fe5 689 PANTHER PTHR21075 1 291 3.2E-172 T 23-04-2016 CFF04554_RS00100 58b2d0af276eb0cf2209b8964c822fe5 689 PANTHER PTHR21075 314 684 3.2E-172 T 23-04-2016 CFF04554_RS00100 58b2d0af276eb0cf2209b8964c822fe5 689 Pfam PF03477 ATP cone domain 2 82 2.6E-18 T 23-04-2016 IPR005144 ATP-cone domain CFF04554_RS00100 58b2d0af276eb0cf2209b8964c822fe5 689 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 116 684 4.5E-123 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CFF04554_RS03155 fca736b2bc096458a0b0f5f1f441892b 231 Gene3D G3DSA:3.40.50.150 15 220 1.6E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03155 fca736b2bc096458a0b0f5f1f441892b 231 Pfam PF05175 Methyltransferase small domain 16 112 4.2E-15 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 CFF04554_RS03155 fca736b2bc096458a0b0f5f1f441892b 231 PANTHER PTHR18895:SF75 1 216 9.0E-34 T 23-04-2016 CFF04554_RS03155 fca736b2bc096458a0b0f5f1f441892b 231 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 98 104 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CFF04554_RS03155 fca736b2bc096458a0b0f5f1f441892b 231 SUPERFAMILY SSF53335 14 174 2.15E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03155 fca736b2bc096458a0b0f5f1f441892b 231 PANTHER PTHR18895 1 216 9.0E-34 T 23-04-2016 CFF04554_RS05980 a46f93f1c5769ecd940ba6de331aa2bb 177 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 27 155 1.4E-35 T 23-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CFF04554_RS05980 a46f93f1c5769ecd940ba6de331aa2bb 177 Gene3D G3DSA:4.10.1020.10 72 142 6.9E-24 T 23-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain CFF04554_RS05980 a46f93f1c5769ecd940ba6de331aa2bb 177 PANTHER PTHR38604:SF1 29 162 1.4E-21 T 23-04-2016 CFF04554_RS05980 a46f93f1c5769ecd940ba6de331aa2bb 177 PIRSF PIRSF006105 1 171 4.1E-42 T 23-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CFF04554_RS05980 a46f93f1c5769ecd940ba6de331aa2bb 177 SUPERFAMILY SSF48695 50 162 1.88E-27 T 23-04-2016 IPR011031 Multihaem cytochrome CFF04554_RS05980 a46f93f1c5769ecd940ba6de331aa2bb 177 PANTHER PTHR38604 29 162 1.4E-21 T 23-04-2016 CFF04554_RS00205 6bcdf7d6e5c91c9c7a84cc813da6995f 61 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00205 6bcdf7d6e5c91c9c7a84cc813da6995f 61 SUPERFAMILY SSF46561 1 58 9.55E-15 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00205 6bcdf7d6e5c91c9c7a84cc813da6995f 61 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 14.267 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00205 6bcdf7d6e5c91c9c7a84cc813da6995f 61 Gene3D G3DSA:1.10.287.310 1 58 1.9E-16 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00205 6bcdf7d6e5c91c9c7a84cc813da6995f 61 Pfam PF00831 Ribosomal L29 protein 5 58 2.8E-16 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00205 6bcdf7d6e5c91c9c7a84cc813da6995f 61 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 58 1.4E-18 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS05365 9e165a1f2c69c19aacffc4986daf8262 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 312 2.8E-32 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS05365 9e165a1f2c69c19aacffc4986daf8262 319 PANTHER PTHR10799:SF750 187 316 5.8E-14 T 23-04-2016 CFF04554_RS05365 9e165a1f2c69c19aacffc4986daf8262 319 PANTHER PTHR10799:SF750 14 171 5.8E-14 T 23-04-2016 CFF04554_RS05365 9e165a1f2c69c19aacffc4986daf8262 319 SUPERFAMILY SSF55073 158 313 4.47E-30 T 23-04-2016 IPR029787 Nucleotide cyclase CFF04554_RS05365 9e165a1f2c69c19aacffc4986daf8262 319 SMART SM00267 142 313 2.1E-33 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS05365 9e165a1f2c69c19aacffc4986daf8262 319 Gene3D G3DSA:3.30.70.270 154 314 1.9E-34 T 23-04-2016 CFF04554_RS05365 9e165a1f2c69c19aacffc4986daf8262 319 PANTHER PTHR10799 187 316 5.8E-14 T 23-04-2016 CFF04554_RS05365 9e165a1f2c69c19aacffc4986daf8262 319 PANTHER PTHR10799 14 171 5.8E-14 T 23-04-2016 CFF04554_RS05365 9e165a1f2c69c19aacffc4986daf8262 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 309 1.8E-32 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 28 176 3.6E-47 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 PANTHER PTHR10173:SF40 21 170 1.7E-85 T 23-04-2016 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 PANTHER PTHR10173:SF40 299 337 1.7E-85 T 23-04-2016 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 SUPERFAMILY SSF51316 196 334 9.42E-57 T 23-04-2016 IPR011057 Mss4-like CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 Pfam PF01641 SelR domain 200 320 4.7E-47 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 27 182 34.267 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 Gene3D G3DSA:2.170.150.20 192 336 3.5E-59 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 Pfam PF01625 Peptide methionine sulfoxide reductase 30 177 6.7E-57 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 196 329 6.0E-60 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 SUPERFAMILY SSF55068 10 179 1.96E-60 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 PANTHER PTHR10173 21 170 1.7E-85 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 PANTHER PTHR10173 299 337 1.7E-85 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 197 321 34.837 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 CFF04554_RS06580 69e25ef7e82020d704eb2a58bff86720 337 Gene3D G3DSA:3.30.1060.10 18 177 1.4E-62 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CFF04554_RS08020 35d70230402ed1915ed9ee4d2ecf2d14 288 Pfam PF01435 Peptidase family M48 65 273 1.5E-37 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CFF04554_RS08020 35d70230402ed1915ed9ee4d2ecf2d14 288 Hamap MF_00188 Protease HtpX [htpX]. 3 274 27.142 T 23-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CFF04554_RS08020 35d70230402ed1915ed9ee4d2ecf2d14 288 PANTHER PTHR10120:SF19 1 277 1.0E-92 T 23-04-2016 CFF04554_RS08020 35d70230402ed1915ed9ee4d2ecf2d14 288 PANTHER PTHR10120 1 277 1.0E-92 T 23-04-2016 CFF04554_RS08020 35d70230402ed1915ed9ee4d2ecf2d14 288 Gene3D G3DSA:3.30.2010.10 64 144 1.1E-29 T 23-04-2016 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 SUPERFAMILY SSF54534 80 155 2.49E-20 T 23-04-2016 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 Gene3D G3DSA:1.10.287.180 3 74 9.7E-32 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 6.7E-30 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 SUPERFAMILY SSF46557 4 77 4.45E-27 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 PIRSF PIRSF006092 1 157 5.8E-48 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 Gene3D G3DSA:3.10.50.30 75 155 2.2E-26 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 1.3E-24 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 154 29.627 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 16 47 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 PANTHER PTHR30437 4 160 7.1E-60 T 23-04-2016 CFF04554_RS01645 b6638969e7767df5f82d8aaf1c53368b 161 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 153 5.0E-58 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CFF04554_RS07805 176c6c3c198f636ab4019b9fd797429e 304 Pfam PF00551 Formyl transferase 3 159 2.9E-31 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS07805 176c6c3c198f636ab4019b9fd797429e 304 SUPERFAMILY SSF53328 3 190 1.83E-46 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS07805 176c6c3c198f636ab4019b9fd797429e 304 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 299 1.2E-67 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS07805 176c6c3c198f636ab4019b9fd797429e 304 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 298 29.788 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS07805 176c6c3c198f636ab4019b9fd797429e 304 SUPERFAMILY SSF50486 204 303 1.51E-17 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CFF04554_RS07805 176c6c3c198f636ab4019b9fd797429e 304 Gene3D G3DSA:3.40.50.170 3 199 7.1E-49 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS07805 176c6c3c198f636ab4019b9fd797429e 304 PANTHER PTHR11138 2 303 1.7E-71 T 23-04-2016 CFF04554_RS07805 176c6c3c198f636ab4019b9fd797429e 304 Gene3D G3DSA:3.10.25.10 205 303 4.9E-17 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS07805 176c6c3c198f636ab4019b9fd797429e 304 Pfam PF02911 Formyl transferase, C-terminal domain 202 295 3.8E-17 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS02340 138eea1cc104acf5b5cc13c6dbd8ee50 304 PANTHER PTHR36698:SF2 2 293 1.0E-25 T 23-04-2016 CFF04554_RS02340 138eea1cc104acf5b5cc13c6dbd8ee50 304 Pfam PF02470 MlaD protein 38 116 3.5E-11 T 23-04-2016 IPR003399 Mce/MlaD CFF04554_RS02340 138eea1cc104acf5b5cc13c6dbd8ee50 304 PANTHER PTHR36698 2 293 1.0E-25 T 23-04-2016 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 SUPERFAMILY SSF54686 1 138 2.35E-56 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.1E-47 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 6.0E-56 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.573 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.8E-35 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.8E-35 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.8E-35 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.8E-35 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 Gene3D G3DSA:3.90.1170.10 23 139 7.1E-52 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00200 91041bcb020279a8b09ca46ea610216d 141 PANTHER PTHR12220 1 140 1.8E-72 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CFF04554_RS06045 aef2f68c1179caf5aa9716dadc046682 148 Gene3D G3DSA:3.40.1400.10 1 146 1.2E-65 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CFF04554_RS06045 aef2f68c1179caf5aa9716dadc046682 148 PIRSF PIRSF005384 4 148 5.1E-57 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CFF04554_RS06045 aef2f68c1179caf5aa9716dadc046682 148 Pfam PF02502 Ribose/Galactose Isomerase 6 143 2.0E-54 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CFF04554_RS06045 aef2f68c1179caf5aa9716dadc046682 148 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 146 4.9E-55 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CFF04554_RS06045 aef2f68c1179caf5aa9716dadc046682 148 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 5 144 3.9E-49 T 23-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CFF04554_RS06045 aef2f68c1179caf5aa9716dadc046682 148 PANTHER PTHR30345 6 146 1.5E-63 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CFF04554_RS06045 aef2f68c1179caf5aa9716dadc046682 148 SUPERFAMILY SSF89623 4 146 3.14E-53 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CFF04554_RS06110 6c29027e73121d35f3155c69db840cb6 152 Gene3D G3DSA:3.40.630.30 2 138 1.1E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS06110 6c29027e73121d35f3155c69db840cb6 152 SUPERFAMILY SSF55729 34 151 6.92E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS06110 6c29027e73121d35f3155c69db840cb6 152 PANTHER PTHR30602:SF4 24 129 5.3E-12 T 23-04-2016 CFF04554_RS06110 6c29027e73121d35f3155c69db840cb6 152 Pfam PF13673 Acetyltransferase (GNAT) domain 34 123 5.4E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CFF04554_RS06110 6c29027e73121d35f3155c69db840cb6 152 PANTHER PTHR30602 24 129 5.3E-12 T 23-04-2016 CFF04554_RS08355 942b59ed6ff5ed254e1eb481e5109cc3 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 256 3.5E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS08355 942b59ed6ff5ed254e1eb481e5109cc3 260 Gene3D G3DSA:1.10.3720.10 51 258 5.8E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS08355 942b59ed6ff5ed254e1eb481e5109cc3 260 PANTHER PTHR30465 6 254 1.6E-47 T 23-04-2016 CFF04554_RS08355 942b59ed6ff5ed254e1eb481e5109cc3 260 SUPERFAMILY SSF161098 56 248 3.01E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PANTHER PTHR10366:SF77 270 351 2.8E-168 T 23-04-2016 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PANTHER PTHR10366:SF77 2 53 2.8E-168 T 23-04-2016 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PANTHER PTHR10366:SF77 70 251 2.8E-168 T 23-04-2016 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.4E-26 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PRINTS PR01713 Nucleotide sugar epimerase signature 231 246 1.4E-26 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PRINTS PR01713 Nucleotide sugar epimerase signature 271 286 1.4E-26 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PRINTS PR01713 Nucleotide sugar epimerase signature 310 327 1.4E-26 T 23-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 Gene3D G3DSA:3.90.25.10 275 346 6.8E-17 T 23-04-2016 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PANTHER PTHR10366 270 351 2.8E-168 T 23-04-2016 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PANTHER PTHR10366 2 53 2.8E-168 T 23-04-2016 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 PANTHER PTHR10366 70 251 2.8E-168 T 23-04-2016 CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 SUPERFAMILY SSF51735 1 349 1.47E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 Gene3D G3DSA:3.40.50.720 1 239 4.4E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07100 239d86f3fd4598086f5d0a3367d12237 352 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 9.1E-50 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CFF04554_RS01625 b80cbfeb8ef20f1913a51c97956e46fe 294 PANTHER PTHR35287 59 146 8.1E-13 T 23-04-2016 CFF04554_RS01625 b80cbfeb8ef20f1913a51c97956e46fe 294 Pfam PF08378 Nuclease-related domain 26 138 1.6E-15 T 23-04-2016 IPR011528 Nuclease-related domain, NERD CFF04554_RS02580 01be3b34f48700151e0494865323f5b5 270 SUPERFAMILY SSF117143 96 221 1.83E-17 T 23-04-2016 CFF04554_RS02580 01be3b34f48700151e0494865323f5b5 270 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 145 1.1E-28 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CFF04554_RS02580 01be3b34f48700151e0494865323f5b5 270 Pfam PF00460 Flagella basal body rod protein 6 35 1.3E-8 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CFF04554_RS02580 01be3b34f48700151e0494865323f5b5 270 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 191 253 5.2E-11 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS02580 01be3b34f48700151e0494865323f5b5 270 PANTHER PTHR30435 1 252 8.7E-43 T 23-04-2016 CFF04554_RS02580 01be3b34f48700151e0494865323f5b5 270 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site CFF04554_RS02580 01be3b34f48700151e0494865323f5b5 270 PANTHER PTHR30435:SF16 1 252 8.7E-43 T 23-04-2016 CFF04554_RS02600 347e7995106036f104cab573ee9a54cd 454 Pfam PF04945 YHS domain 403 448 2.8E-7 T 23-04-2016 IPR007029 YHS domain CFF04554_RS02600 347e7995106036f104cab573ee9a54cd 454 Pfam PF10080 Predicted membrane protein (DUF2318) 295 395 8.7E-30 T 23-04-2016 IPR018758 Domain of unknown function DUF2318, membrane CFF04554_RS06890 c630a42c62bc4dcf89299a415d5dc10f 121 SUPERFAMILY SSF52172 2 121 1.29E-35 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS06890 c630a42c62bc4dcf89299a415d5dc10f 121 PANTHER PTHR26402 1 120 2.0E-39 T 23-04-2016 CFF04554_RS06890 c630a42c62bc4dcf89299a415d5dc10f 121 SMART SM00448 1 116 2.3E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS06890 c630a42c62bc4dcf89299a415d5dc10f 121 Gene3D G3DSA:3.40.50.2300 2 121 2.0E-36 T 23-04-2016 CFF04554_RS06890 c630a42c62bc4dcf89299a415d5dc10f 121 Pfam PF00072 Response regulator receiver domain 4 116 1.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS02470 09b219cff0509459f1086fe0c34726a4 209 Gene3D G3DSA:3.40.50.10420 6 183 6.3E-33 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CFF04554_RS02470 09b219cff0509459f1086fe0c34726a4 209 PANTHER PTHR23407:SF1 1 144 8.6E-14 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CFF04554_RS02470 09b219cff0509459f1086fe0c34726a4 209 PIRSF PIRSF006806 2 181 1.2E-26 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CFF04554_RS02470 09b219cff0509459f1086fe0c34726a4 209 PANTHER PTHR23407 1 144 8.6E-14 T 23-04-2016 CFF04554_RS02470 09b219cff0509459f1086fe0c34726a4 209 SUPERFAMILY SSF100950 6 185 3.35E-35 T 23-04-2016 CFF04554_RS02470 09b219cff0509459f1086fe0c34726a4 209 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 178 1.5E-31 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CFF04554_RS02470 09b219cff0509459f1086fe0c34726a4 209 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 176 3.0E-19 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CFF04554_RS01670 79536069cd4ec345341df9d2337c528b 165 SUPERFAMILY SSF50341 25 163 2.62E-38 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CFF04554_RS01670 79536069cd4ec345341df9d2337c528b 165 SMART SM00260 25 161 2.3E-38 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CFF04554_RS01670 79536069cd4ec345341df9d2337c528b 165 PANTHER PTHR22617 25 165 7.3E-36 T 23-04-2016 CFF04554_RS01670 79536069cd4ec345341df9d2337c528b 165 Gene3D G3DSA:2.40.50.180 68 103 1.2E-9 T 23-04-2016 CFF04554_RS01670 79536069cd4ec345341df9d2337c528b 165 Gene3D G3DSA:2.30.30.40 104 155 3.7E-7 T 23-04-2016 CFF04554_RS01670 79536069cd4ec345341df9d2337c528b 165 Pfam PF01584 CheW-like domain 29 163 3.5E-37 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 458 1.1E-146 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 SMART SM00840 338 402 0.0041 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 Gene3D G3DSA:1.20.120.640 305 394 3.9E-13 T 23-04-2016 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 PANTHER PTHR10890 3 459 9.7E-158 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 310 3.6E-109 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 9.4E-26 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 184 202 9.4E-26 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 9.4E-26 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 219 240 9.4E-26 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 SUPERFAMILY SSF52374 3 309 4.56E-78 T 23-04-2016 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 SUPERFAMILY SSF47323 313 458 7.32E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 Pfam PF09190 DALR domain 341 396 4.9E-6 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 459 33.524 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CFF04554_RS03955 627842fed1de2b039edab05ede9072ea 459 Gene3D G3DSA:3.40.50.620 19 302 1.5E-83 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 43 56 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 Pfam PF00290 Tryptophan synthase alpha chain 9 234 2.8E-72 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 PANTHER PTHR10314:SF4 69 123 5.0E-18 T 23-04-2016 CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 PANTHER PTHR10314:SF4 10 46 5.0E-18 T 23-04-2016 CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 SUPERFAMILY SSF51366 1 245 1.6E-72 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 10 244 1.2E-65 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 PANTHER PTHR10314 69 123 5.0E-18 T 23-04-2016 CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 PANTHER PTHR10314 10 46 5.0E-18 T 23-04-2016 CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 Gene3D G3DSA:3.20.20.70 1 247 3.4E-81 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS01775 7ebeb21c178ebb1b29459ad741715ba0 249 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 9 249 29.391 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CFF04554_RS08960 97228226ed049b40812b25a37f218faa 305 PANTHER PTHR34216:SF1 7 216 1.6E-38 T 23-04-2016 CFF04554_RS08960 97228226ed049b40812b25a37f218faa 305 Pfam PF01522 Polysaccharide deacetylase 61 182 1.1E-24 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CFF04554_RS08960 97228226ed049b40812b25a37f218faa 305 SUPERFAMILY SSF88713 19 183 5.78E-39 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CFF04554_RS08960 97228226ed049b40812b25a37f218faa 305 Gene3D G3DSA:3.20.20.370 32 183 7.4E-31 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CFF04554_RS08960 97228226ed049b40812b25a37f218faa 305 Gene3D G3DSA:3.20.20.370 216 244 7.4E-31 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CFF04554_RS08960 97228226ed049b40812b25a37f218faa 305 PANTHER PTHR34216 7 216 1.6E-38 T 23-04-2016 CFF04554_RS07545 9dcd0d47d63c9dbc7a38a47098e51eb0 338 PANTHER PTHR11933 2 337 7.8E-114 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CFF04554_RS07545 9dcd0d47d63c9dbc7a38a47098e51eb0 338 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2 337 3.4E-99 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CFF04554_RS07545 9dcd0d47d63c9dbc7a38a47098e51eb0 338 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 338 34.565 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CFF04554_RS07545 9dcd0d47d63c9dbc7a38a47098e51eb0 338 Gene3D G3DSA:3.40.50.620 2 196 4.0E-62 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07545 9dcd0d47d63c9dbc7a38a47098e51eb0 338 SUPERFAMILY SSF52402 2 231 4.63E-41 T 23-04-2016 CFF04554_RS07545 9dcd0d47d63c9dbc7a38a47098e51eb0 338 PANTHER PTHR11933:SF10 2 337 7.8E-114 T 23-04-2016 CFF04554_RS07545 9dcd0d47d63c9dbc7a38a47098e51eb0 338 Gene3D G3DSA:2.30.30.280 205 258 6.5E-16 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 CFF04554_RS07545 9dcd0d47d63c9dbc7a38a47098e51eb0 338 Gene3D G3DSA:2.40.30.10 271 337 5.1E-17 T 23-04-2016 CFF04554_RS07545 9dcd0d47d63c9dbc7a38a47098e51eb0 338 Pfam PF03054 tRNA methyl transferase 2 337 7.4E-100 T 23-04-2016 CFF04554_RS02565 4c305cad5389e600bab2768e0aa083c6 250 Pfam PF00669 Bacterial flagellin N-terminal helical region 10 135 2.1E-12 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS02565 4c305cad5389e600bab2768e0aa083c6 250 SUPERFAMILY SSF64518 13 241 1.57E-22 T 23-04-2016 CFF04554_RS02565 4c305cad5389e600bab2768e0aa083c6 250 Gene3D G3DSA:1.20.1330.10 49 205 3.0E-18 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS02565 4c305cad5389e600bab2768e0aa083c6 250 Pfam PF00700 Bacterial flagellin C-terminal helical region 165 240 3.4E-5 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CFF04554_RS08360 71dccf11a8d6dacffa1a403b4efcd579 204 PANTHER PTHR24220 3 198 5.4E-33 T 23-04-2016 CFF04554_RS08360 71dccf11a8d6dacffa1a403b4efcd579 204 Gene3D G3DSA:3.40.50.300 1 198 6.9E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08360 71dccf11a8d6dacffa1a403b4efcd579 204 SUPERFAMILY SSF52540 1 198 5.33E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08360 71dccf11a8d6dacffa1a403b4efcd579 204 Pfam PF00005 ABC transporter 21 147 3.2E-15 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS08360 71dccf11a8d6dacffa1a403b4efcd579 204 SMART SM00382 24 192 9.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS03980 41c2c06251a755d80d396c15435a23aa 185 Gene3D G3DSA:3.40.50.300 1 184 1.8E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03980 41c2c06251a755d80d396c15435a23aa 185 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 2 140 9.5E-20 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CFF04554_RS03980 41c2c06251a755d80d396c15435a23aa 185 SUPERFAMILY SSF52540 1 154 9.25E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03980 41c2c06251a755d80d396c15435a23aa 185 PANTHER PTHR40072 1 70 2.9E-12 T 23-04-2016 CFF04554_RS03980 41c2c06251a755d80d396c15435a23aa 185 PANTHER PTHR40072:SF2 1 70 2.9E-12 T 23-04-2016 CFF04554_RS03650 30754d5cb86c2bb66a924d881cdd80a3 93 PANTHER PTHR33909 4 89 4.4E-24 T 23-04-2016 CFF04554_RS03650 30754d5cb86c2bb66a924d881cdd80a3 93 PRINTS PR01853 Bacterial YajC preprotein translocase signature 5 25 4.2E-17 T 23-04-2016 IPR003849 Preprotein translocase YajC CFF04554_RS03650 30754d5cb86c2bb66a924d881cdd80a3 93 PRINTS PR01853 Bacterial YajC preprotein translocase signature 25 43 4.2E-17 T 23-04-2016 IPR003849 Preprotein translocase YajC CFF04554_RS03650 30754d5cb86c2bb66a924d881cdd80a3 93 Pfam PF02699 Preprotein translocase subunit 7 83 3.4E-30 T 23-04-2016 IPR003849 Preprotein translocase YajC CFF04554_RS03650 30754d5cb86c2bb66a924d881cdd80a3 93 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 4 85 1.7E-31 T 23-04-2016 IPR003849 Preprotein translocase YajC CFF04554_RS03650 30754d5cb86c2bb66a924d881cdd80a3 93 SMART SM01323 3 85 4.2E-43 T 23-04-2016 IPR003849 Preprotein translocase YajC CFF04554_RS03650 30754d5cb86c2bb66a924d881cdd80a3 93 PANTHER PTHR33909:SF1 4 89 4.4E-24 T 23-04-2016 CFF04554_RS00230 57b36433ba99a58a45a60a21d3eff8a4 61 Gene3D G3DSA:4.10.830.10 1 61 2.3E-26 T 23-04-2016 CFF04554_RS00230 57b36433ba99a58a45a60a21d3eff8a4 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 2.0E-23 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00230 57b36433ba99a58a45a60a21d3eff8a4 61 PANTHER PTHR19836 12 61 6.2E-30 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00230 57b36433ba99a58a45a60a21d3eff8a4 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 23-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00230 57b36433ba99a58a45a60a21d3eff8a4 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.292 T 23-04-2016 IPR023053 Ribosomal protein S14, type Z CFF04554_RS00230 57b36433ba99a58a45a60a21d3eff8a4 61 SUPERFAMILY SSF57716 3 61 1.64E-20 T 23-04-2016 CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 Gene3D G3DSA:3.40.50.300 181 461 6.8E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 Pfam PF03796 DnaB-like helicase C terminal domain 185 460 3.8E-95 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 PANTHER PTHR30153 1 401 4.8E-128 T 23-04-2016 CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 PANTHER PTHR30153 423 471 4.8E-128 T 23-04-2016 CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 19 461 6.1E-133 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 Gene3D G3DSA:1.10.860.10 19 111 3.0E-14 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 SMART SM00382 202 399 4.8E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 SUPERFAMILY SSF52540 185 397 3.23E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 SUPERFAMILY SSF52540 428 453 3.23E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 SUPERFAMILY SSF48024 17 120 4.05E-18 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CFF04554_RS04895 6e2403debce727bc48d59e832653c211 475 Pfam PF00772 DnaB-like helicase N terminal domain 18 111 8.0E-17 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 SMART SM00388 188 254 3.3E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 Gene3D G3DSA:1.10.287.130 183 249 2.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 Gene3D G3DSA:3.30.565.10 262 406 1.1E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 SMART SM00387 299 405 3.9E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 SUPERFAMILY SSF55874 262 402 1.44E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 382 1.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 362 1.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 350 1.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 SUPERFAMILY SSF47384 174 252 7.46E-12 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 190 253 2.4E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 304 402 2.9E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 PANTHER PTHR24423 9 24 9.3E-35 T 23-04-2016 CFF04554_RS01210 ed6c97eb33fde0fa20065ac8701dc434 421 PANTHER PTHR24423 129 404 9.3E-35 T 23-04-2016 CFF04554_RS06965 2c489a94123d0bf56bf4ce98398403f8 132 SMART SM00671 86 121 5.3E-5 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS06965 2c489a94123d0bf56bf4ce98398403f8 132 SMART SM00671 53 84 250.0 T 23-04-2016 IPR006597 Sel1-like repeat CFF04554_RS06965 2c489a94123d0bf56bf4ce98398403f8 132 Gene3D G3DSA:1.25.40.10 38 129 1.7E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS06965 2c489a94123d0bf56bf4ce98398403f8 132 SUPERFAMILY SSF81901 41 125 6.67E-10 T 23-04-2016 CFF04554_RS00970 3aba752af2885b057fdf44cadb675259 437 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 18 154 9.1E-15 T 23-04-2016 CFF04554_RS00970 3aba752af2885b057fdf44cadb675259 437 Gene3D G3DSA:2.30.310.10 18 150 3.8E-23 T 23-04-2016 CFF04554_RS00970 3aba752af2885b057fdf44cadb675259 437 Pfam PF05670 Domain of unknown function (DUF814) 337 418 6.7E-19 T 23-04-2016 IPR008532 Domain of unknown function DUF814 CFF04554_RS04565 655a06ec21fc05429b60582d4197f094 730 Gene3D G3DSA:3.40.718.10 171 285 1.4E-10 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CFF04554_RS04565 655a06ec21fc05429b60582d4197f094 730 Gene3D G3DSA:3.40.718.10 335 358 1.4E-10 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CFF04554_RS04565 655a06ec21fc05429b60582d4197f094 730 Gene3D G3DSA:3.40.718.10 416 639 3.6E-25 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CFF04554_RS04565 655a06ec21fc05429b60582d4197f094 730 PIRSF PIRSF009407 1 730 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CFF04554_RS04565 655a06ec21fc05429b60582d4197f094 730 SUPERFAMILY SSF53659 2 729 1.73E-301 T 23-04-2016 CFF04554_RS04565 655a06ec21fc05429b60582d4197f094 730 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 728 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CFF04554_RS04565 655a06ec21fc05429b60582d4197f094 730 PANTHER PTHR36999 1 728 0.0 T 23-04-2016 CFF04554_RS04565 655a06ec21fc05429b60582d4197f094 730 Pfam PF03971 Monomeric isocitrate dehydrogenase 4 728 0.0 T 23-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CFF04554_RS07670 97ffe354e6d62ad1ef5d0495c88c04ea 163 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 35 157 2.4E-20 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CFF04554_RS07670 97ffe354e6d62ad1ef5d0495c88c04ea 163 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 34 157 3.0E-30 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CFF04554_RS07670 97ffe354e6d62ad1ef5d0495c88c04ea 163 Gene3D G3DSA:3.30.70.560 33 157 9.0E-31 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CFF04554_RS07670 97ffe354e6d62ad1ef5d0495c88c04ea 163 PANTHER PTHR20941 8 156 5.0E-29 T 23-04-2016 CFF04554_RS07670 97ffe354e6d62ad1ef5d0495c88c04ea 163 SUPERFAMILY SSF55083 32 157 1.7E-31 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CFF04554_RS07670 97ffe354e6d62ad1ef5d0495c88c04ea 163 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 117 128 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CFF04554_RS08550 c1f78175b0660cac9f0056f5d68093a0 195 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 6 188 40.73 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CFF04554_RS08550 c1f78175b0660cac9f0056f5d68093a0 195 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 67 83 - T 23-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CFF04554_RS08550 c1f78175b0660cac9f0056f5d68093a0 195 PANTHER PTHR11109 3 189 2.6E-111 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CFF04554_RS08550 c1f78175b0660cac9f0056f5d68093a0 195 Pfam PF01227 GTP cyclohydrolase I 11 187 1.1E-77 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CFF04554_RS08550 c1f78175b0660cac9f0056f5d68093a0 195 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 11 188 5.9E-76 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CFF04554_RS08550 c1f78175b0660cac9f0056f5d68093a0 195 Gene3D G3DSA:1.10.286.10 9 57 5.5E-24 T 23-04-2016 CFF04554_RS08550 c1f78175b0660cac9f0056f5d68093a0 195 SUPERFAMILY SSF55620 4 188 1.56E-80 T 23-04-2016 CFF04554_RS08550 c1f78175b0660cac9f0056f5d68093a0 195 Gene3D G3DSA:3.30.1130.10 60 188 1.1E-59 T 23-04-2016 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 SUPERFAMILY SSF47323 623 810 2.4E-15 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 809 20.756 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 Gene3D G3DSA:1.10.730.10 608 733 9.4E-27 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 Gene3D G3DSA:3.90.740.10 222 424 8.4E-48 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PANTHER PTHR11946:SF7 246 271 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PANTHER PTHR11946:SF7 1 204 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PANTHER PTHR11946:SF7 292 809 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 810 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 Pfam PF09334 tRNA synthetases class I (M) 34 179 9.2E-21 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 SUPERFAMILY SSF52374 2 225 1.95E-142 T 23-04-2016 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 SUPERFAMILY SSF52374 416 627 1.95E-142 T 23-04-2016 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 403 3.4E-53 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 618 1.1E-25 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PANTHER PTHR11946 246 271 0.0 T 23-04-2016 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PANTHER PTHR11946 1 204 0.0 T 23-04-2016 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PANTHER PTHR11946 292 809 0.0 T 23-04-2016 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 SUPERFAMILY SSF50677 222 419 1.15E-44 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 Gene3D G3DSA:3.40.50.620 425 607 3.8E-147 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 Gene3D G3DSA:3.40.50.620 1 221 3.8E-147 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PRINTS PR00985 Leucyl-tRNA synthetase signature 487 505 1.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 1.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 1.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 571 1.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 1.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS03670 108bd7ba86f73740c3eb2e96bdf4e76a 811 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 1.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Gene3D G3DSA:3.30.1360.40 240 334 7.5E-36 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 474 6.4E-154 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 PANTHER PTHR10169:SF48 7 657 0.0 T 23-04-2016 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 PANTHER PTHR10169:SF48 691 816 0.0 T 23-04-2016 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 SMART SM00434 15 467 2.8E-282 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 SUPERFAMILY SSF101904 695 851 1.18E-96 T 23-04-2016 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 SUPERFAMILY SSF101904 501 661 1.18E-96 T 23-04-2016 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 PANTHER PTHR10169 7 657 0.0 T 23-04-2016 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 PANTHER PTHR10169 691 816 0.0 T 23-04-2016 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 551 6.6E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 797 841 4.2E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 556 605 1.5E-8 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 694 740 1.8E-12 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 657 5.0E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 745 792 5.8E-12 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 14 659 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Gene3D G3DSA:3.90.199.10 35 239 3.6E-117 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Gene3D G3DSA:3.90.199.10 336 400 3.6E-117 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Gene3D G3DSA:2.120.10.90 695 839 1.5E-121 T 23-04-2016 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Gene3D G3DSA:2.120.10.90 499 661 1.5E-121 T 23-04-2016 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 SUPERFAMILY SSF56719 35 489 3.92E-173 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CFF04554_RS07460 772686b152089f27ffd0273f60c2f956 862 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 845 28.589 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS00940 569dcfaa46efb2f6258cdf678e7b5a25 330 PIRSF PIRSF018688 4 330 5.6E-84 T 23-04-2016 IPR016732 Uncharacterised conserved protein UCP018688 CFF04554_RS00940 569dcfaa46efb2f6258cdf678e7b5a25 330 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 35 327 2.1E-25 T 23-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CFF04554_RS00940 569dcfaa46efb2f6258cdf678e7b5a25 330 Gene3D G3DSA:3.40.630.30 152 320 5.6E-50 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS00940 569dcfaa46efb2f6258cdf678e7b5a25 330 SUPERFAMILY SSF55729 157 329 3.07E-43 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS00940 569dcfaa46efb2f6258cdf678e7b5a25 330 SUPERFAMILY SSF55729 9 156 3.28E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS00940 569dcfaa46efb2f6258cdf678e7b5a25 330 PANTHER PTHR41373 4 327 2.0E-34 T 23-04-2016 CFF04554_RS00940 569dcfaa46efb2f6258cdf678e7b5a25 330 Gene3D G3DSA:3.40.630.30 9 151 2.8E-13 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS03905 bb81ce8c8c953390dc3be0c80f63977c 290 PANTHER PTHR22911 4 288 9.8E-99 T 23-04-2016 CFF04554_RS03905 bb81ce8c8c953390dc3be0c80f63977c 290 SUPERFAMILY SSF103481 208 285 7.32E-9 T 23-04-2016 CFF04554_RS03905 bb81ce8c8c953390dc3be0c80f63977c 290 PANTHER PTHR22911:SF41 4 288 9.8E-99 T 23-04-2016 CFF04554_RS03905 bb81ce8c8c953390dc3be0c80f63977c 290 TIGRFAM TIGR00688 rarD: protein RarD 6 258 2.2E-62 T 23-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CFF04554_RS03905 bb81ce8c8c953390dc3be0c80f63977c 290 SUPERFAMILY SSF103481 42 142 1.27E-7 T 23-04-2016 CFF04554_RS03905 bb81ce8c8c953390dc3be0c80f63977c 290 Pfam PF00892 EamA-like transporter family 7 141 3.0E-10 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CFF04554_RS04270 c4f4b0ed74cbcccc1f3c2237742f3ef6 133 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 15 119 1.6E-25 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CFF04554_RS04270 c4f4b0ed74cbcccc1f3c2237742f3ef6 133 PANTHER PTHR33540:SF2 14 101 6.4E-13 T 23-04-2016 CFF04554_RS04270 c4f4b0ed74cbcccc1f3c2237742f3ef6 133 PANTHER PTHR33540 14 101 6.4E-13 T 23-04-2016 CFF04554_RS04270 c4f4b0ed74cbcccc1f3c2237742f3ef6 133 Gene3D G3DSA:3.40.50.300 16 130 9.9E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04270 c4f4b0ed74cbcccc1f3c2237742f3ef6 133 SUPERFAMILY SSF52540 18 100 1.1E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04270 c4f4b0ed74cbcccc1f3c2237742f3ef6 133 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 19 112 1.0E-22 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 Gene3D G3DSA:2.30.330.10 189 276 6.1E-28 T 23-04-2016 CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 197 265 9.4E-21 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 SUPERFAMILY SSF103039 37 165 1.18E-11 T 23-04-2016 IPR028976 CheC-like domain CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 Gene3D G3DSA:3.40.1550.10 4 113 5.2E-9 T 23-04-2016 IPR028976 CheC-like domain CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 193 268 3.8E-25 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 SUPERFAMILY SSF101801 194 275 6.54E-21 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 PANTHER PTHR30034:SF1 190 276 1.0E-16 T 23-04-2016 CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 PANTHER PTHR30034 190 276 1.0E-16 T 23-04-2016 CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 PRINTS PR00956 Flagellar motor switch protein FliN signature 196 212 1.9E-16 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 PRINTS PR00956 Flagellar motor switch protein FliN signature 229 242 1.9E-16 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 PRINTS PR00956 Flagellar motor switch protein FliN signature 242 257 1.9E-16 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CFF04554_RS07700 a89509dcc6921861ab071633b036ed92 276 PRINTS PR00956 Flagellar motor switch protein FliN signature 213 229 1.9E-16 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 PIRSF PIRSF005644 1 330 6.2E-119 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 3 330 1.2E-132 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 PANTHER PTHR30303:SF0 1 330 3.6E-136 T 23-04-2016 CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 PANTHER PTHR30303 1 330 3.6E-136 T 23-04-2016 CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 Pfam PF02769 AIR synthase related protein, C-terminal domain 162 306 1.7E-22 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 SUPERFAMILY SSF55326 3 150 1.26E-29 T 23-04-2016 CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 Pfam PF00586 AIR synthase related protein, N-terminal domain 37 147 2.3E-16 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 Gene3D G3DSA:3.30.1330.10 32 147 1.9E-20 T 23-04-2016 IPR016188 PurM-like, N-terminal domain CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 SUPERFAMILY SSF56042 161 325 2.24E-34 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS04650 0aa315baebec517397fb74111283a28e 330 Gene3D G3DSA:3.90.650.10 162 310 9.1E-18 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain CFF04554_RS04660 0c8a951faa3481aba5d73d69c0a741e9 92 PANTHER PTHR35177:SF2 1 91 5.5E-27 T 23-04-2016 CFF04554_RS04660 0c8a951faa3481aba5d73d69c0a741e9 92 PANTHER PTHR35177 1 91 5.5E-27 T 23-04-2016 CFF04554_RS04660 0c8a951faa3481aba5d73d69c0a741e9 92 Pfam PF01455 HupF/HypC family 1 66 7.8E-25 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CFF04554_RS04660 0c8a951faa3481aba5d73d69c0a741e9 92 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 8.7E-25 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CFF04554_RS04660 0c8a951faa3481aba5d73d69c0a741e9 92 SUPERFAMILY SSF159127 1 82 1.12E-25 T 23-04-2016 CFF04554_RS04660 0c8a951faa3481aba5d73d69c0a741e9 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 1.3E-13 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CFF04554_RS04660 0c8a951faa3481aba5d73d69c0a741e9 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.3E-13 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CFF04554_RS04660 0c8a951faa3481aba5d73d69c0a741e9 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 1.3E-13 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CFF04554_RS02665 63c7447bb08bba73591368c23594529b 432 PANTHER PTHR23508:SF5 3 430 1.5E-143 T 23-04-2016 CFF04554_RS02665 63c7447bb08bba73591368c23594529b 432 SUPERFAMILY SSF103473 11 426 3.14E-54 T 23-04-2016 IPR020846 Major facilitator superfamily domain CFF04554_RS02665 63c7447bb08bba73591368c23594529b 432 Pfam PF07690 Major Facilitator Superfamily 55 364 1.6E-21 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CFF04554_RS02665 63c7447bb08bba73591368c23594529b 432 Gene3D G3DSA:1.20.1250.20 241 424 3.0E-11 T 23-04-2016 CFF04554_RS02665 63c7447bb08bba73591368c23594529b 432 Gene3D G3DSA:1.20.1250.20 16 219 1.5E-18 T 23-04-2016 CFF04554_RS02665 63c7447bb08bba73591368c23594529b 432 PANTHER PTHR23508 3 430 1.5E-143 T 23-04-2016 CFF04554_RS06530 6625509a388c823c044ddf5b1aba5055 126 PANTHER PTHR26402 4 114 5.5E-26 T 23-04-2016 CFF04554_RS06530 6625509a388c823c044ddf5b1aba5055 126 Pfam PF00072 Response regulator receiver domain 6 117 1.5E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS06530 6625509a388c823c044ddf5b1aba5055 126 SMART SM00448 4 118 1.8E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS06530 6625509a388c823c044ddf5b1aba5055 126 SUPERFAMILY SSF52172 1 123 5.27E-28 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS06530 6625509a388c823c044ddf5b1aba5055 126 Gene3D G3DSA:3.40.50.2300 2 123 1.2E-30 T 23-04-2016 CFF04554_RS02110 557b352614daa308fe257e6522dd431c 67 SUPERFAMILY SSF55008 2 63 3.27E-8 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CFF04554_RS02110 557b352614daa308fe257e6522dd431c 67 Gene3D G3DSA:3.30.70.100 2 62 6.0E-7 T 23-04-2016 CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 SMART SM00382 51 182 6.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 PANTHER PTHR13779:SF25 2 337 7.5E-147 T 23-04-2016 CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 Gene3D G3DSA:1.10.8.60 183 255 5.7E-26 T 23-04-2016 CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 323 1.3E-133 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 SUPERFAMILY SSF52540 20 249 1.48E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 Gene3D G3DSA:1.10.10.10 257 325 3.2E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 3.2E-112 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 326 2.0E-36 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 Gene3D G3DSA:3.40.50.300 20 179 6.5E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 SUPERFAMILY SSF46785 256 328 4.54E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 324 4.4E-22 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 343 148.101 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CFF04554_RS02360 e1a7b3d865b8aeda1bd39488a546b864 343 PANTHER PTHR13779 2 337 7.5E-147 T 23-04-2016 CFF04554_RS01905 a90b749d3c7974c1fa337b384cfcba94 76 TIGRFAM TIGR02736 cbb3_Q_epsi: cytochrome c oxidase, cbb3-type, CcoQ subunit 11 62 2.6E-22 T 23-04-2016 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ CFF04554_RS01905 a90b749d3c7974c1fa337b384cfcba94 76 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 4 54 6.2E-18 T 23-04-2016 IPR008621 Cbb3-type cytochrome oxidase component CFF04554_RS01200 e1095f7062a13e6e5ad64e732c960b40 105 Pfam PF02152 Dihydroneopterin aldolase 4 101 1.2E-10 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CFF04554_RS01200 e1095f7062a13e6e5ad64e732c960b40 105 SMART SM00905 4 103 1.3E-13 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CFF04554_RS01200 e1095f7062a13e6e5ad64e732c960b40 105 SUPERFAMILY SSF55620 4 96 3.06E-14 T 23-04-2016 CFF04554_RS01200 e1095f7062a13e6e5ad64e732c960b40 105 Gene3D G3DSA:3.30.1130.10 3 102 3.0E-11 T 23-04-2016 CFF04554_RS06820 97e43d20575263fe12055e6253754ad8 106 PANTHER PTHR30561 1 106 6.0E-21 T 23-04-2016 CFF04554_RS06820 97e43d20575263fe12055e6253754ad8 106 Pfam PF00893 Small Multidrug Resistance protein 1 96 1.1E-18 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 CFF04554_RS06820 97e43d20575263fe12055e6253754ad8 106 SUPERFAMILY SSF103481 6 105 5.49E-12 T 23-04-2016 CFF04554_RS06820 97e43d20575263fe12055e6253754ad8 106 PANTHER PTHR30561:SF8 1 106 6.0E-21 T 23-04-2016 CFF04554_RS00520 ab2ea732f7d20a9d50941471bbad7f31 223 Gene3D G3DSA:3.40.50.620 5 222 2.4E-88 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS00520 ab2ea732f7d20a9d50941471bbad7f31 223 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 5 219 51.61 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CFF04554_RS00520 ab2ea732f7d20a9d50941471bbad7f31 223 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 7 206 5.0E-61 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CFF04554_RS00520 ab2ea732f7d20a9d50941471bbad7f31 223 PANTHER PTHR11587 3 221 1.0E-77 T 23-04-2016 CFF04554_RS00520 ab2ea732f7d20a9d50941471bbad7f31 223 Pfam PF06508 Queuosine biosynthesis protein QueC 6 213 2.4E-75 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CFF04554_RS00520 ab2ea732f7d20a9d50941471bbad7f31 223 PANTHER PTHR11587:SF3 3 221 1.0E-77 T 23-04-2016 CFF04554_RS00520 ab2ea732f7d20a9d50941471bbad7f31 223 PIRSF PIRSF006293 3 223 1.4E-78 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CFF04554_RS00520 ab2ea732f7d20a9d50941471bbad7f31 223 SUPERFAMILY SSF52402 5 221 1.39E-58 T 23-04-2016 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 SUPERFAMILY SSF118215 19 414 1.1E-93 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 PANTHER PTHR11958:SF49 19 429 3.2E-144 T 23-04-2016 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 Pfam PF00375 Sodium:dicarboxylate symporter family 19 413 1.3E-98 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 5.1E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 PRINTS PR00173 Glutamate-aspartate symporter signature 84 109 5.1E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 5.1E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 PRINTS PR00173 Glutamate-aspartate symporter signature 156 178 5.1E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 5.1E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 PRINTS PR00173 Glutamate-aspartate symporter signature 204 223 5.1E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 PRINTS PR00173 Glutamate-aspartate symporter signature 54 74 5.1E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 Gene3D G3DSA:1.10.3860.10 17 419 6.6E-94 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS02135 5a856ca8bac78801a243892aa22af715 436 PANTHER PTHR11958 19 429 3.2E-144 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CFF04554_RS05850 938d4e8c1448070f848cf0d93203be05 209 Hamap MF_00984 Single-stranded DNA-binding protein. 2 109 32.619 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CFF04554_RS05850 938d4e8c1448070f848cf0d93203be05 209 Pfam PF00436 Single-strand binding protein family 2 105 1.8E-34 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 CFF04554_RS05850 938d4e8c1448070f848cf0d93203be05 209 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 209 3.2E-46 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CFF04554_RS05850 938d4e8c1448070f848cf0d93203be05 209 SUPERFAMILY SSF50249 1 185 7.54E-46 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05850 938d4e8c1448070f848cf0d93203be05 209 PANTHER PTHR10302 1 194 8.5E-34 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CFF04554_RS05850 938d4e8c1448070f848cf0d93203be05 209 Gene3D G3DSA:2.40.50.140 189 209 4.9E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05850 938d4e8c1448070f848cf0d93203be05 209 Gene3D G3DSA:2.40.50.140 1 119 4.9E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 Pfam PF12801 4Fe-4S binding domain 160 197 5.8E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 Pfam PF12801 4Fe-4S binding domain 64 106 3.8E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 Pfam PF13237 4Fe-4S dicluster domain 198 245 2.5E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 SUPERFAMILY SSF54862 170 252 4.79E-19 T 23-04-2016 CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 SUPERFAMILY SSF54862 77 122 4.79E-19 T 23-04-2016 CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 PANTHER PTHR30176:SF2 1 253 3.1E-38 T 23-04-2016 CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 PANTHER PTHR30176 1 253 3.1E-38 T 23-04-2016 CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 205 216 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 3 253 3.9E-84 T 23-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 CFF04554_RS05985 7b862941a477b54397a043e043f3cd2b 261 Gene3D G3DSA:3.30.70.20 172 252 2.0E-14 T 23-04-2016 CFF04554_RS02685 18eaf59e2be8dcff5b7af0e836b8eb52 261 SUPERFAMILY SSF53335 28 246 4.37E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02685 18eaf59e2be8dcff5b7af0e836b8eb52 261 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 259 3.0E-60 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CFF04554_RS02685 18eaf59e2be8dcff5b7af0e836b8eb52 261 Gene3D G3DSA:3.40.50.150 79 259 3.4E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02685 18eaf59e2be8dcff5b7af0e836b8eb52 261 PANTHER PTHR18895 27 261 2.0E-57 T 23-04-2016 CFF04554_RS02685 18eaf59e2be8dcff5b7af0e836b8eb52 261 Pfam PF05175 Methyltransferase small domain 88 181 3.0E-15 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 CFF04554_RS02685 18eaf59e2be8dcff5b7af0e836b8eb52 261 Gene3D G3DSA:1.10.8.10 21 77 1.3E-8 T 23-04-2016 CFF04554_RS02685 18eaf59e2be8dcff5b7af0e836b8eb52 261 PANTHER PTHR18895:SF64 27 261 2.0E-57 T 23-04-2016 CFF04554_RS02685 18eaf59e2be8dcff5b7af0e836b8eb52 261 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 172 178 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CFF04554_RS02685 18eaf59e2be8dcff5b7af0e836b8eb52 261 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 21 256 2.8E-65 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CFF04554_RS08480 3f6768bcb668c8ff4126260f0ca9c530 501 Pfam PF03787 RAMP superfamily 41 450 2.7E-14 T 23-04-2016 IPR005537 CRISPR type III-associated RAMP protein CFF04554_RS08480 3f6768bcb668c8ff4126260f0ca9c530 501 TIGRFAM TIGR03986 TIGR03986: CRISPR-associated protein 6 491 1.3E-77 T 23-04-2016 IPR023825 CRISPR-associated RAMP BGP1436 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 Gene3D G3DSA:3.30.1490.20 22 95 8.3E-33 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 384 37.663 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 Gene3D G3DSA:3.40.50.261 238 383 4.3E-60 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 PANTHER PTHR11815 1 385 1.5E-193 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 Pfam PF08442 ATP-grasp domain 2 199 6.1E-66 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 SUPERFAMILY SSF56059 1 235 2.23E-72 T 23-04-2016 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 PANTHER PTHR11815:SF1 1 385 1.5E-193 T 23-04-2016 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 SUPERFAMILY SSF52210 237 383 4.19E-49 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 Gene3D G3DSA:3.30.470.20 96 235 1.7E-48 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 Pfam PF00549 CoA-ligase 259 366 4.8E-21 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 254 279 - T 23-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 PIRSF PIRSF001554 1 385 1.1E-138 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CFF04554_RS04555 66e2b6d6a32e3bee740fbf4234ddd817 385 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 383 2.9E-141 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CFF04554_RS00030 fc205bc7fc6cc09a5066cfa2c9cd3d3e 406 SUPERFAMILY SSF109604 178 289 1.33E-31 T 23-04-2016 CFF04554_RS00030 fc205bc7fc6cc09a5066cfa2c9cd3d3e 406 SUPERFAMILY SSF109604 334 402 1.33E-31 T 23-04-2016 CFF04554_RS00030 fc205bc7fc6cc09a5066cfa2c9cd3d3e 406 SUPERFAMILY SSF109604 5 164 5.96E-5 T 23-04-2016 CFF04554_RS00030 fc205bc7fc6cc09a5066cfa2c9cd3d3e 406 Pfam PF13023 HD domain 191 376 2.7E-39 T 23-04-2016 IPR006674 HD domain CFF04554_RS00030 fc205bc7fc6cc09a5066cfa2c9cd3d3e 406 Gene3D G3DSA:1.10.3210.10 176 284 4.5E-56 T 23-04-2016 IPR006674 HD domain CFF04554_RS00030 fc205bc7fc6cc09a5066cfa2c9cd3d3e 406 Gene3D G3DSA:1.10.3210.10 333 403 4.5E-56 T 23-04-2016 IPR006674 HD domain CFF04554_RS00725 020b186db00ca9b7a95ca73d1c545e00 149 Pfam PF04214 Protein of unknown function, DUF 50 116 5.9E-32 T 23-04-2016 IPR007332 Protein of unknown function DUF411 CFF04554_RS01180 02aff63bab2d9eac0d2b6f8d7fea3dcd 328 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 324 9.3E-35 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CFF04554_RS01180 02aff63bab2d9eac0d2b6f8d7fea3dcd 328 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 325 69.175 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CFF04554_RS01180 02aff63bab2d9eac0d2b6f8d7fea3dcd 328 PANTHER PTHR34069:SF2 1 326 9.8E-122 T 23-04-2016 CFF04554_RS01180 02aff63bab2d9eac0d2b6f8d7fea3dcd 328 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 1.2E-30 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CFF04554_RS01180 02aff63bab2d9eac0d2b6f8d7fea3dcd 328 SUPERFAMILY SSF53901 3 325 1.03E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CFF04554_RS01180 02aff63bab2d9eac0d2b6f8d7fea3dcd 328 PANTHER PTHR34069 1 326 9.8E-122 T 23-04-2016 CFF04554_RS01180 02aff63bab2d9eac0d2b6f8d7fea3dcd 328 Gene3D G3DSA:3.40.47.10 162 325 6.0E-52 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CFF04554_RS01180 02aff63bab2d9eac0d2b6f8d7fea3dcd 328 Gene3D G3DSA:3.40.47.10 1 161 1.3E-62 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CFF04554_RS01180 02aff63bab2d9eac0d2b6f8d7fea3dcd 328 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 325 3.3E-132 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 226 31.426 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 PIRSF PIRSF005917 1 271 2.7E-70 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 PANTHER PTHR21091 2 224 4.0E-42 T 23-04-2016 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 268 6.1E-68 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 Gene3D G3DSA:3.40.1010.10 2 116 7.7E-9 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 203 3.9E-22 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 PANTHER PTHR21091:SF18 2 224 4.0E-42 T 23-04-2016 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 86 97 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 SUPERFAMILY SSF53790 2 224 1.57E-57 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CFF04554_RS01435 564287a69c27123a25462253e12561c3 271 Gene3D G3DSA:3.30.950.10 117 226 8.0E-25 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CFF04554_RS04085 6ced9156789a1f209c2991056c795a0f 234 PRINTS PR01008 Flagellar L-ring protein signature 211 225 2.11E-16 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CFF04554_RS04085 6ced9156789a1f209c2991056c795a0f 234 PRINTS PR01008 Flagellar L-ring protein signature 174 190 2.11E-16 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CFF04554_RS04085 6ced9156789a1f209c2991056c795a0f 234 PRINTS PR01008 Flagellar L-ring protein signature 148 163 2.11E-16 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CFF04554_RS04085 6ced9156789a1f209c2991056c795a0f 234 PRINTS PR01008 Flagellar L-ring protein signature 195 209 2.11E-16 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CFF04554_RS04085 6ced9156789a1f209c2991056c795a0f 234 PRINTS PR01008 Flagellar L-ring protein signature 67 79 2.11E-16 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CFF04554_RS04085 6ced9156789a1f209c2991056c795a0f 234 Pfam PF02107 Flagellar L-ring protein 47 233 7.9E-52 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CFF04554_RS04085 6ced9156789a1f209c2991056c795a0f 234 PANTHER PTHR34933 5 234 4.0E-37 T 23-04-2016 CFF04554_RS04085 6ced9156789a1f209c2991056c795a0f 234 Hamap MF_00415 Flagellar L-ring protein [flgH]. 2 232 24.875 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CFF04554_RS02370 bd3a9e2ae138041ffc06e1feeec469d9 254 PANTHER PTHR20881 6 252 8.8E-110 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CFF04554_RS02370 bd3a9e2ae138041ffc06e1feeec469d9 254 Gene3D G3DSA:3.20.20.60 2 252 1.3E-98 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CFF04554_RS02370 bd3a9e2ae138041ffc06e1feeec469d9 254 Pfam PF02548 Ketopantoate hydroxymethyltransferase 2 247 5.9E-97 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CFF04554_RS02370 bd3a9e2ae138041ffc06e1feeec469d9 254 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 251 2.1E-103 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CFF04554_RS02370 bd3a9e2ae138041ffc06e1feeec469d9 254 SUPERFAMILY SSF51621 3 252 2.83E-90 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CFF04554_RS02370 bd3a9e2ae138041ffc06e1feeec469d9 254 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 252 36.092 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CFF04554_RS02370 bd3a9e2ae138041ffc06e1feeec469d9 254 PIRSF PIRSF000388 1 254 2.0E-96 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CFF04554_RS00255 f11aa5753e65e21db924d29cd5b41077 133 PANTHER PTHR12934 1 122 8.9E-30 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CFF04554_RS00255 f11aa5753e65e21db924d29cd5b41077 133 SUPERFAMILY SSF52080 5 128 3.66E-28 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P CFF04554_RS00255 f11aa5753e65e21db924d29cd5b41077 133 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 129 1.6E-38 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CFF04554_RS00255 f11aa5753e65e21db924d29cd5b41077 133 Gene3D G3DSA:3.100.10.10 32 114 1.5E-9 T 23-04-2016 CFF04554_RS00255 f11aa5753e65e21db924d29cd5b41077 133 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 133 13.241 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CFF04554_RS00255 f11aa5753e65e21db924d29cd5b41077 133 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 128 3.5E-16 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P CFF04554_RS00445 c1f557fcd084df272999987dc2cf9ed9 377 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 15 370 1.4E-59 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS00445 c1f557fcd084df272999987dc2cf9ed9 377 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 192 369 2.0E-14 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS00445 c1f557fcd084df272999987dc2cf9ed9 377 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 13 169 1.9E-38 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS00445 c1f557fcd084df272999987dc2cf9ed9 377 SUPERFAMILY SSF55120 251 371 1.15E-74 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS00445 c1f557fcd084df272999987dc2cf9ed9 377 SUPERFAMILY SSF55120 13 221 1.15E-74 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS00445 c1f557fcd084df272999987dc2cf9ed9 377 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 7 374 25.828 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS00445 c1f557fcd084df272999987dc2cf9ed9 377 PANTHER PTHR13326 24 374 2.9E-32 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS00735 c32e37cd9f81a446b488b7b8b2ff912f 322 SUPERFAMILY SSF90123 17 314 5.36E-12 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CFF04554_RS00735 c32e37cd9f81a446b488b7b8b2ff912f 322 PANTHER PTHR11384 19 318 4.2E-35 T 23-04-2016 CFF04554_RS00735 c32e37cd9f81a446b488b7b8b2ff912f 322 Gene3D G3DSA:1.20.1560.10 114 313 8.9E-4 T 23-04-2016 CFF04554_RS00735 c32e37cd9f81a446b488b7b8b2ff912f 322 PANTHER PTHR11384:SF3 19 318 4.2E-35 T 23-04-2016 CFF04554_RS00735 c32e37cd9f81a446b488b7b8b2ff912f 322 Pfam PF05992 SbmA/BacA-like family 9 319 4.3E-122 T 23-04-2016 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 CFF04554_RS06335 89880a41d5a75f4b3f9742dca24665c2 504 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 479 7.2E-189 T 23-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CFF04554_RS06335 89880a41d5a75f4b3f9742dca24665c2 504 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 437 1.4E-81 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS06335 89880a41d5a75f4b3f9742dca24665c2 504 PANTHER PTHR11819 2 470 1.9E-172 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS06335 89880a41d5a75f4b3f9742dca24665c2 504 Pfam PF00474 Sodium:solute symporter family 33 437 7.0E-86 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS06335 89880a41d5a75f4b3f9742dca24665c2 504 PANTHER PTHR11819:SF148 2 470 1.9E-172 T 23-04-2016 CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 PANTHER PTHR22572:SF115 5 425 8.7E-144 T 23-04-2016 CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 Pfam PF12804 MobA-like NTP transferase domain 7 154 1.6E-15 T 23-04-2016 IPR025877 MobA-like NTP transferase CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 428 33.189 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 PANTHER PTHR22572 5 425 8.7E-144 T 23-04-2016 CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 SUPERFAMILY SSF51161 255 413 4.98E-32 T 23-04-2016 IPR011004 Trimeric LpxA-like CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 Gene3D G3DSA:3.90.550.10 2 241 7.6E-53 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 Gene3D G3DSA:2.160.10.10 316 423 1.3E-21 T 23-04-2016 CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 428 5.3E-145 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 Gene3D G3DSA:2.160.10.10 242 315 3.0E-9 T 23-04-2016 CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 SUPERFAMILY SSF53448 3 249 2.48E-48 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS03780 01cf99efb2787960f7b3f735eec24809 436 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 371 405 5.1E-6 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS00070 45326ff72fe2c18a2f5f8eabf88733e3 353 Gene3D G3DSA:1.10.10.10 175 234 1.0E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS00070 45326ff72fe2c18a2f5f8eabf88733e3 353 Gene3D G3DSA:3.40.50.300 273 290 6.7E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00070 45326ff72fe2c18a2f5f8eabf88733e3 353 Gene3D G3DSA:3.40.50.300 26 67 6.7E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00745 36762c3179a44324d782953f9e9f1f27 531 PANTHER PTHR30003:SF0 7 530 5.6E-214 T 23-04-2016 CFF04554_RS00745 36762c3179a44324d782953f9e9f1f27 531 PANTHER PTHR30003 7 530 5.6E-214 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CFF04554_RS00745 36762c3179a44324d782953f9e9f1f27 531 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 5 521 1.3E-185 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CFF04554_RS00745 36762c3179a44324d782953f9e9f1f27 531 Pfam PF02652 L-lactate permease 10 519 1.8E-180 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CFF04554_RS08410 69e7fc5e9ac6141f5a6a15be4f98ed12 223 PANTHER PTHR35891 1 220 3.5E-21 T 23-04-2016 CFF04554_RS08410 69e7fc5e9ac6141f5a6a15be4f98ed12 223 SUPERFAMILY SSF52833 24 219 1.39E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS08410 69e7fc5e9ac6141f5a6a15be4f98ed12 223 Gene3D G3DSA:3.40.30.10 25 221 2.3E-36 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS09085 f9aa5c03222f7c9674cdb61d98d98f4a 387 SUPERFAMILY SSF103473 2 379 3.66E-45 T 23-04-2016 IPR020846 Major facilitator superfamily domain CFF04554_RS09085 f9aa5c03222f7c9674cdb61d98d98f4a 387 Pfam PF05977 Transmembrane secretion effector 2 372 1.6E-52 T 23-04-2016 IPR010290 Transmembrane secretion effector CFF04554_RS09085 f9aa5c03222f7c9674cdb61d98d98f4a 387 PANTHER PTHR23513:SF11 2 375 1.5E-69 T 23-04-2016 CFF04554_RS09085 f9aa5c03222f7c9674cdb61d98d98f4a 387 PANTHER PTHR23513 2 375 1.5E-69 T 23-04-2016 CFF04554_RS09085 f9aa5c03222f7c9674cdb61d98d98f4a 387 Gene3D G3DSA:1.20.1250.20 206 376 7.9E-10 T 23-04-2016 CFF04554_RS09085 f9aa5c03222f7c9674cdb61d98d98f4a 387 Gene3D G3DSA:1.20.1250.20 9 183 2.9E-20 T 23-04-2016 CFF04554_RS04960 e26cae787e92de1ee5a7dd1f5d37f9c3 180 PANTHER PTHR32194 2 171 4.6E-87 T 23-04-2016 CFF04554_RS04960 e26cae787e92de1ee5a7dd1f5d37f9c3 180 SUPERFAMILY SSF56235 1 174 1.71E-50 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS04960 e26cae787e92de1ee5a7dd1f5d37f9c3 180 Gene3D G3DSA:3.60.20.10 5 174 1.8E-73 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS04960 e26cae787e92de1ee5a7dd1f5d37f9c3 180 PIRSF PIRSF039093 1 179 9.4E-80 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CFF04554_RS04960 e26cae787e92de1ee5a7dd1f5d37f9c3 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 173 9.8E-74 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CFF04554_RS04960 e26cae787e92de1ee5a7dd1f5d37f9c3 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 39.023 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CFF04554_RS04960 e26cae787e92de1ee5a7dd1f5d37f9c3 180 Pfam PF00227 Proteasome subunit 1 174 2.0E-23 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 CFF04554_RS07335 a7e0fb42e355e58aa85c55e517e08d84 214 PANTHER PTHR24220:SF111 3 205 3.1E-63 T 23-04-2016 CFF04554_RS07335 a7e0fb42e355e58aa85c55e517e08d84 214 SMART SM00382 25 206 7.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS07335 a7e0fb42e355e58aa85c55e517e08d84 214 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS07335 a7e0fb42e355e58aa85c55e517e08d84 214 Pfam PF00005 ABC transporter 17 158 9.1E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS07335 a7e0fb42e355e58aa85c55e517e08d84 214 PANTHER PTHR24220 3 205 3.1E-63 T 23-04-2016 CFF04554_RS07335 a7e0fb42e355e58aa85c55e517e08d84 214 Gene3D G3DSA:3.40.50.300 4 205 3.6E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07335 a7e0fb42e355e58aa85c55e517e08d84 214 SUPERFAMILY SSF52540 7 206 3.18E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01895 f18d12df819edaff28b4e1acb4b1bca4 488 Gene3D G3DSA:1.20.210.10 12 485 1.7E-69 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CFF04554_RS01895 f18d12df819edaff28b4e1acb4b1bca4 488 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 485 1.5E-213 T 23-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CFF04554_RS01895 f18d12df819edaff28b4e1acb4b1bca4 488 PANTHER PTHR10422 8 480 9.3E-170 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CFF04554_RS01895 f18d12df819edaff28b4e1acb4b1bca4 488 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 270 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CFF04554_RS01895 f18d12df819edaff28b4e1acb4b1bca4 488 SUPERFAMILY SSF81442 9 485 1.23E-114 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CFF04554_RS01895 f18d12df819edaff28b4e1acb4b1bca4 488 PANTHER PTHR10422:SF21 8 480 9.3E-170 T 23-04-2016 CFF04554_RS01895 f18d12df819edaff28b4e1acb4b1bca4 488 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 454 3.7E-107 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CFF04554_RS00325 e827eb0468d0130c1e0948ef43163f95 548 PANTHER PTHR32089 120 548 6.1E-79 T 23-04-2016 CFF04554_RS00325 e827eb0468d0130c1e0948ef43163f95 548 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 189 1.0E-18 T 23-04-2016 IPR024478 4HB MCP domain CFF04554_RS00325 e827eb0468d0130c1e0948ef43163f95 548 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 344 545 1.8E-42 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS00325 e827eb0468d0130c1e0948ef43163f95 548 SMART SM00283 286 547 7.9E-48 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS00325 e827eb0468d0130c1e0948ef43163f95 548 SUPERFAMILY SSF58104 262 548 1.7E-57 T 23-04-2016 CFF04554_RS00325 e827eb0468d0130c1e0948ef43163f95 548 Gene3D G3DSA:1.10.287.950 303 518 8.1E-47 T 23-04-2016 CFF04554_RS00325 e827eb0468d0130c1e0948ef43163f95 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 9.5E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS00325 e827eb0468d0130c1e0948ef43163f95 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 411 9.5E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS00325 e827eb0468d0130c1e0948ef43163f95 548 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 9.5E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 Pfam PF01713 Smr domain 659 733 6.6E-18 T 23-04-2016 IPR002625 Smr domain CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 SMART SM00534 300 484 3.1E-21 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 PANTHER PTHR11361 54 570 8.3E-26 T 23-04-2016 CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 Pfam PF00488 MutS domain V 304 482 4.6E-13 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 SUPERFAMILY SSF52540 277 487 2.39E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 Gene3D G3DSA:3.40.50.300 278 486 1.5E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 PANTHER PTHR11361:SF14 54 570 8.3E-26 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 1 733 17.674 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 SUPERFAMILY SSF160443 657 732 1.44E-9 T 23-04-2016 IPR002625 Smr domain CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 SMART SM00463 656 733 2.0E-10 T 23-04-2016 IPR002625 Smr domain CFF04554_RS03090 d80d79045112146b446e1c7bb0712f2c 733 SMART SM00533 2 291 0.0035 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CFF04554_RS02520 161e50de576a8e77d3ccfb74a5c64346 361 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 106 260 8.5E-35 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS02520 161e50de576a8e77d3ccfb74a5c64346 361 Pfam PF13682 Chemoreceptor zinc-binding domain 258 316 2.2E-7 T 23-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 CFF04554_RS02520 161e50de576a8e77d3ccfb74a5c64346 361 Gene3D G3DSA:1.10.287.950 70 260 9.3E-47 T 23-04-2016 CFF04554_RS02520 161e50de576a8e77d3ccfb74a5c64346 361 SUPERFAMILY SSF58104 31 266 1.44E-48 T 23-04-2016 CFF04554_RS02520 161e50de576a8e77d3ccfb74a5c64346 361 PANTHER PTHR32089 70 238 9.5E-43 T 23-04-2016 CFF04554_RS02520 161e50de576a8e77d3ccfb74a5c64346 361 SMART SM00283 41 275 5.3E-17 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS02535 e8f02e5ca09fd3956ed3545ccddd57df 269 PANTHER PTHR10657:SF11 5 267 7.9E-39 T 23-04-2016 CFF04554_RS02535 e8f02e5ca09fd3956ed3545ccddd57df 269 SUPERFAMILY SSF54534 120 221 2.36E-24 T 23-04-2016 CFF04554_RS02535 e8f02e5ca09fd3956ed3545ccddd57df 269 Pfam PF00639 PPIC-type PPIASE domain 134 222 2.2E-20 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CFF04554_RS02535 e8f02e5ca09fd3956ed3545ccddd57df 269 PANTHER PTHR10657 5 267 7.9E-39 T 23-04-2016 CFF04554_RS02535 e8f02e5ca09fd3956ed3545ccddd57df 269 SUPERFAMILY SSF109998 21 149 5.49E-19 T 23-04-2016 IPR027304 Trigger factor/SurA domain CFF04554_RS02535 e8f02e5ca09fd3956ed3545ccddd57df 269 Gene3D G3DSA:3.10.50.40 119 248 1.3E-34 T 23-04-2016 CFF04554_RS04335 c601b12fcc061f0a7bdf0c79984dd8f0 136 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 4.1E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS04335 c601b12fcc061f0a7bdf0c79984dd8f0 136 SUPERFAMILY SSF54523 5 111 9.42E-13 T 23-04-2016 CFF04554_RS04335 c601b12fcc061f0a7bdf0c79984dd8f0 136 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 21 6.3E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS04335 c601b12fcc061f0a7bdf0c79984dd8f0 136 Gene3D G3DSA:3.30.700.10 5 105 4.3E-7 T 23-04-2016 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 Pfam PF01039 Carboxyl transferase domain 59 235 3.8E-17 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 PANTHER PTHR22855:SF17 6 286 5.0E-137 T 23-04-2016 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 PANTHER PTHR22855 6 286 5.0E-137 T 23-04-2016 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 SUPERFAMILY SSF52096 23 278 1.35E-78 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 Gene3D G3DSA:3.90.226.10 20 279 3.3E-70 T 23-04-2016 IPR029045 ClpP/crotonase-like domain CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 11 278 1.6E-125 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 278 37.884 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 226 237 7.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 248 257 7.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 160 178 7.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 197 214 7.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS01250 396c631727eeeabb03d36b6efcb99b84 293 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 126 140 7.6E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CFF04554_RS02450 e25e7618e22ca185be6e75af01a8c36a 437 PANTHER PTHR30576 57 436 1.1E-87 T 23-04-2016 CFF04554_RS02450 e25e7618e22ca185be6e75af01a8c36a 437 PANTHER PTHR30576:SF4 57 436 1.1E-87 T 23-04-2016 CFF04554_RS02450 e25e7618e22ca185be6e75af01a8c36a 437 Pfam PF02397 Bacterial sugar transferase 240 431 1.1E-52 T 23-04-2016 IPR003362 Bacterial sugar transferase CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 SUPERFAMILY SSF51735 1 209 1.34E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 291 30.333 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 PANTHER PTHR11728 1 296 5.3E-79 T 23-04-2016 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 PANTHER PTHR11728:SF1 1 296 5.3E-79 T 23-04-2016 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 Gene3D G3DSA:3.40.50.720 1 36 7.1E-5 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 Gene3D G3DSA:1.10.1040.10 154 295 3.0E-49 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 150 284 8.2E-45 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 PIRSF PIRSF000114 28 296 4.0E-69 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 143 167 4.8E-25 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 208 225 4.8E-25 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 168 192 4.8E-25 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 4.8E-25 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 158 179 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 Gene3D G3DSA:3.40.50.720 40 153 3.9E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 38 131 8.8E-18 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CFF04554_RS03890 75f5e1a5d3984f5f73a59612e792f1bb 296 SUPERFAMILY SSF48179 149 295 1.7E-47 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CFF04554_RS09395 0d9a0fcdc4e70e74e559a7d6ba9eebfc 82 PANTHER PTHR24322:SF485 6 76 6.0E-13 T 23-04-2016 CFF04554_RS09395 0d9a0fcdc4e70e74e559a7d6ba9eebfc 82 Pfam PF00106 short chain dehydrogenase 2 78 4.2E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS09395 0d9a0fcdc4e70e74e559a7d6ba9eebfc 82 Gene3D G3DSA:3.40.50.720 1 80 1.6E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS09395 0d9a0fcdc4e70e74e559a7d6ba9eebfc 82 PANTHER PTHR24322 6 76 6.0E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS09395 0d9a0fcdc4e70e74e559a7d6ba9eebfc 82 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.7E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS09395 0d9a0fcdc4e70e74e559a7d6ba9eebfc 82 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 68 79 6.7E-6 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS09395 0d9a0fcdc4e70e74e559a7d6ba9eebfc 82 SUPERFAMILY SSF51735 1 78 3.94E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS08905 00c483e35c127f0e58cde015cc0a63a9 247 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS08905 00c483e35c127f0e58cde015cc0a63a9 247 Gene3D G3DSA:3.10.310.10 1 134 2.7E-36 T 23-04-2016 CFF04554_RS08905 00c483e35c127f0e58cde015cc0a63a9 247 Gene3D G3DSA:3.10.310.10 135 219 2.6E-20 T 23-04-2016 CFF04554_RS08905 00c483e35c127f0e58cde015cc0a63a9 247 SUPERFAMILY SSF54506 122 246 4.49E-23 T 23-04-2016 CFF04554_RS08905 00c483e35c127f0e58cde015cc0a63a9 247 PANTHER PTHR31689 1 210 1.3E-45 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS08905 00c483e35c127f0e58cde015cc0a63a9 247 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 245 5.5E-56 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS08905 00c483e35c127f0e58cde015cc0a63a9 247 SUPERFAMILY SSF54506 1 116 1.24E-30 T 23-04-2016 CFF04554_RS08905 00c483e35c127f0e58cde015cc0a63a9 247 Pfam PF01678 Diaminopimelate epimerase 133 203 1.2E-6 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS08905 00c483e35c127f0e58cde015cc0a63a9 247 Pfam PF01678 Diaminopimelate epimerase 4 113 2.3E-22 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CFF04554_RS06365 b4346d3da327da9a9ed4515e9d4a2c54 258 Pfam PF02673 Bacitracin resistance protein BacA 6 251 1.0E-76 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CFF04554_RS06365 b4346d3da327da9a9ed4515e9d4a2c54 258 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 250 1.7E-74 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CFF04554_RS06365 b4346d3da327da9a9ed4515e9d4a2c54 258 PANTHER PTHR30622 1 257 2.7E-102 T 23-04-2016 CFF04554_RS06365 b4346d3da327da9a9ed4515e9d4a2c54 258 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 257 17.953 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CFF04554_RS06365 b4346d3da327da9a9ed4515e9d4a2c54 258 PANTHER PTHR30622:SF3 1 257 2.7E-102 T 23-04-2016 CFF04554_RS03920 621070c54019e40e5d7a0327c74ec76c 252 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 52 65 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CFF04554_RS03920 621070c54019e40e5d7a0327c74ec76c 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 247 2.6E-57 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS03920 621070c54019e40e5d7a0327c74ec76c 252 Gene3D G3DSA:3.40.190.10 117 201 1.1E-20 T 23-04-2016 CFF04554_RS03920 621070c54019e40e5d7a0327c74ec76c 252 PANTHER PTHR18966 29 250 1.3E-68 T 23-04-2016 CFF04554_RS03920 621070c54019e40e5d7a0327c74ec76c 252 PANTHER PTHR18966:SF208 29 250 1.3E-68 T 23-04-2016 CFF04554_RS03920 621070c54019e40e5d7a0327c74ec76c 252 SMART SM00062 29 249 8.4E-65 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS03920 621070c54019e40e5d7a0327c74ec76c 252 SUPERFAMILY SSF53850 26 250 4.35E-58 T 23-04-2016 CFF04554_RS03920 621070c54019e40e5d7a0327c74ec76c 252 Gene3D G3DSA:3.40.190.10 27 116 4.8E-35 T 23-04-2016 CFF04554_RS03920 621070c54019e40e5d7a0327c74ec76c 252 Gene3D G3DSA:3.40.190.10 208 250 4.8E-35 T 23-04-2016 CFF04554_RS08510 667f4ba1cac6cfa71702bd59579dd7fb 239 Pfam PF03741 Integral membrane protein TerC family 15 204 4.1E-52 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 CFF04554_RS08510 667f4ba1cac6cfa71702bd59579dd7fb 239 PANTHER PTHR30060 1 239 1.2E-110 T 23-04-2016 CFF04554_RS08510 667f4ba1cac6cfa71702bd59579dd7fb 239 PANTHER PTHR30060:SF1 1 239 1.2E-110 T 23-04-2016 CFF04554_RS08860 cfc4da46288f61ec2fd17ab07b1c1307 326 Pfam PF01032 FecCD transport family 15 320 2.9E-86 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CFF04554_RS08860 cfc4da46288f61ec2fd17ab07b1c1307 326 Gene3D G3DSA:1.10.3470.10 5 323 8.4E-97 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS08860 cfc4da46288f61ec2fd17ab07b1c1307 326 PANTHER PTHR30472:SF3 4 326 1.9E-115 T 23-04-2016 CFF04554_RS08860 cfc4da46288f61ec2fd17ab07b1c1307 326 SUPERFAMILY SSF81345 4 320 6.93E-75 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS08860 cfc4da46288f61ec2fd17ab07b1c1307 326 PANTHER PTHR30472 4 326 1.9E-115 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CFF04554_RS00455 b5873ecd21189efeaf5ebff526f7947e 129 SUPERFAMILY SSF101116 6 124 1.96E-32 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CFF04554_RS00455 b5873ecd21189efeaf5ebff526f7947e 129 Pfam PF02561 Flagellar protein FliS 7 119 3.9E-32 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CFF04554_RS00455 b5873ecd21189efeaf5ebff526f7947e 129 PIRSF PIRSF039090 1 129 5.0E-28 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CFF04554_RS00455 b5873ecd21189efeaf5ebff526f7947e 129 Gene3D G3DSA:1.20.120.340 6 124 3.1E-32 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CFF04554_RS00455 b5873ecd21189efeaf5ebff526f7947e 129 PANTHER PTHR34773 7 129 1.7E-20 T 23-04-2016 CFF04554_RS00455 b5873ecd21189efeaf5ebff526f7947e 129 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 122 3.7E-35 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 CFF04554_RS05060 9f96ebba367e53fa05af26528a9c2d62 159 SUPERFAMILY SSF52016 3 157 8.44E-52 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFF04554_RS05060 9f96ebba367e53fa05af26528a9c2d62 159 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 1 159 36.611 T 23-04-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS05060 9f96ebba367e53fa05af26528a9c2d62 159 PANTHER PTHR11670 4 156 5.0E-64 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS05060 9f96ebba367e53fa05af26528a9c2d62 159 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 3 156 3.2E-63 T 23-04-2016 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS05060 9f96ebba367e53fa05af26528a9c2d62 159 Gene3D G3DSA:3.20.19.10 4 157 1.2E-38 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFF04554_RS05060 9f96ebba367e53fa05af26528a9c2d62 159 Pfam PF00694 Aconitase C-terminal domain 35 103 3.9E-24 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS05060 9f96ebba367e53fa05af26528a9c2d62 159 PANTHER PTHR11670:SF41 4 156 5.0E-64 T 23-04-2016 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 394 1.6E-21 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 PIRSF PIRSF500136 1 402 5.5E-146 T 23-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 PIRSF PIRSF000124 1 400 5.4E-54 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 Gene3D G3DSA:3.40.50.720 229 391 2.0E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 PANTHER PTHR11374 1 390 1.3E-220 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 392 1.5E-121 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 286 3.3E-23 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 SUPERFAMILY SSF51735 2 188 2.18E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 PANTHER PTHR11374:SF25 1 390 1.3E-220 T 23-04-2016 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 171 1.4E-32 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 SMART SM00984 313 397 2.4E-28 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 SUPERFAMILY SSF48179 197 288 1.38E-24 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 SUPERFAMILY SSF52413 297 390 9.94E-29 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 CFF04554_RS07105 70d1663dd84c0485c87aa922bf378c20 402 Gene3D G3DSA:3.40.50.720 2 218 9.3E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01880 81b7f8bc40480749991d7fe895f2aa13 221 PANTHER PTHR42208 1 220 4.1E-24 T 23-04-2016 CFF04554_RS01880 81b7f8bc40480749991d7fe895f2aa13 221 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 9 211 2.3E-49 T 23-04-2016 CFF04554_RS01880 81b7f8bc40480749991d7fe895f2aa13 221 PANTHER PTHR42208:SF1 1 220 4.1E-24 T 23-04-2016 CFF04554_RS08055 ea8d81272e78960f4501a03b5112d597 212 Pfam PF13186 Iron-sulfur cluster-binding domain 123 189 1.0E-7 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CFF04554_RS08055 ea8d81272e78960f4501a03b5112d597 212 Gene3D G3DSA:3.20.20.70 8 189 3.6E-19 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS08055 ea8d81272e78960f4501a03b5112d597 212 SUPERFAMILY SSF102114 8 189 9.61E-16 T 23-04-2016 CFF04554_RS01680 8a9b1bf3798a75e3a0e4dce753a367f0 331 PANTHER PTHR10683 8 271 2.1E-37 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CFF04554_RS01680 8a9b1bf3798a75e3a0e4dce753a367f0 331 TIGRFAM TIGR00876 tal_mycobact: transaldolase 6 328 1.2E-78 T 23-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CFF04554_RS01680 8a9b1bf3798a75e3a0e4dce753a367f0 331 Gene3D G3DSA:3.20.20.70 3 330 4.2E-79 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS01680 8a9b1bf3798a75e3a0e4dce753a367f0 331 Pfam PF00923 Transaldolase 9 329 3.4E-78 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CFF04554_RS01680 8a9b1bf3798a75e3a0e4dce753a367f0 331 PANTHER PTHR10683:SF12 8 271 2.1E-37 T 23-04-2016 CFF04554_RS01680 8a9b1bf3798a75e3a0e4dce753a367f0 331 PIRSF PIRSF036915 2 331 7.2E-62 T 23-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CFF04554_RS01680 8a9b1bf3798a75e3a0e4dce753a367f0 331 Hamap MF_00493 Transaldolase [tal]. 1 331 85.643 T 23-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CFF04554_RS01680 8a9b1bf3798a75e3a0e4dce753a367f0 331 SUPERFAMILY SSF51569 5 330 1.22E-63 T 23-04-2016 CFF04554_RS01680 8a9b1bf3798a75e3a0e4dce753a367f0 331 ProSitePatterns PS01054 Transaldolase signature 1. 34 42 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CFF04554_RS06895 4fa3154ff82a9c176d43c4c6e25bf22a 236 Pfam PF00977 Histidine biosynthesis protein 2 226 4.1E-73 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 CFF04554_RS06895 4fa3154ff82a9c176d43c4c6e25bf22a 236 PANTHER PTHR21235:SF15 1 233 2.3E-94 T 23-04-2016 CFF04554_RS06895 4fa3154ff82a9c176d43c4c6e25bf22a 236 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 234 35.406 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CFF04554_RS06895 4fa3154ff82a9c176d43c4c6e25bf22a 236 Gene3D G3DSA:3.20.20.70 1 232 2.3E-78 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS06895 4fa3154ff82a9c176d43c4c6e25bf22a 236 PANTHER PTHR21235 1 233 2.3E-94 T 23-04-2016 CFF04554_RS06895 4fa3154ff82a9c176d43c4c6e25bf22a 236 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 231 8.5E-82 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CFF04554_RS06895 4fa3154ff82a9c176d43c4c6e25bf22a 236 SUPERFAMILY SSF51366 1 233 1.08E-68 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CFF04554_RS00685 d744a607945f7a07866d9818fb3b1de6 130 Pfam PF14537 Cytochrome c3 39 120 7.2E-18 T 23-04-2016 CFF04554_RS00685 d744a607945f7a07866d9818fb3b1de6 130 SUPERFAMILY SSF48695 42 123 7.23E-13 T 23-04-2016 IPR011031 Multihaem cytochrome CFF04554_RS00685 d744a607945f7a07866d9818fb3b1de6 130 Gene3D G3DSA:3.90.10.10 37 121 1.3E-11 T 23-04-2016 CFF04554_RS08670 ac5a1e4da6f04e256adf293af1b005f7 116 SUPERFAMILY SSF142906 1 115 3.53E-28 T 23-04-2016 CFF04554_RS08670 ac5a1e4da6f04e256adf293af1b005f7 116 Pfam PF04237 YjbR 14 113 5.0E-12 T 23-04-2016 IPR007351 Uncharacterised protein YjbR CFF04554_RS08670 ac5a1e4da6f04e256adf293af1b005f7 116 PANTHER PTHR35145 1 116 9.9E-27 T 23-04-2016 CFF04554_RS08670 ac5a1e4da6f04e256adf293af1b005f7 116 PANTHER PTHR35145:SF1 1 116 9.9E-27 T 23-04-2016 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 247 4.8E-75 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Gene3D G3DSA:3.40.50.970 794 1176 1.0E-132 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 749 760 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 691 702 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 PANTHER PTHR32154 3 1184 0.0 T 23-04-2016 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 SUPERFAMILY SSF52518 5 258 9.42E-74 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Gene3D G3DSA:3.40.920.10 417 624 2.9E-84 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 SUPERFAMILY SSF54862 673 763 7.74E-18 T 23-04-2016 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 371 7.0E-17 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Gene3D G3DSA:3.40.50.970 4 258 9.3E-106 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 SUPERFAMILY SSF52922 260 413 9.11E-47 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 SUPERFAMILY SSF53323 416 661 3.53E-78 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Gene3D G3DSA:4.10.780.10 637 670 1.9E-12 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 PIRSF PIRSF000159 1 1184 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 962 1073 1.6E-8 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 SMART SM00890 624 681 5.5E-21 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Pfam PF12838 4Fe-4S dicluster domain 691 761 2.7E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1176 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 1.1E-30 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Gene3D G3DSA:3.40.50.920 259 413 1.0E-62 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 PANTHER PTHR32154:SF0 3 1184 0.0 T 23-04-2016 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 SUPERFAMILY SSF52518 793 1180 6.47E-114 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Pfam PF10371 Domain of unknown function 637 679 1.4E-17 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CFF04554_RS01965 feda675199a98baa376f37d5628984df 1184 Gene3D G3DSA:3.30.70.20 674 777 4.0E-19 T 23-04-2016 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 SUPERFAMILY SSF46626 201 285 1.48E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 SUPERFAMILY SSF46626 62 193 1.52E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 208 280 6.7E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 119 191 1.3E-5 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 Gene3D G3DSA:1.10.760.10 199 285 2.1E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 Gene3D G3DSA:1.10.760.10 66 193 9.1E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 43 90 2.3E-18 T 23-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 PANTHER PTHR33751 31 287 2.7E-24 T 23-04-2016 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 PIRSF PIRSF000006 13 287 4.3E-63 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 CFF04554_RS01910 d182d3b67abdbf04518dfcc0ebbc546f 287 PANTHER PTHR33751:SF1 31 287 2.7E-24 T 23-04-2016 CFF04554_RS00145 eb19f507a94d0d9cc412cc20aa7416d6 220 PANTHER PTHR23088:SF27 79 182 1.6E-16 T 23-04-2016 CFF04554_RS00145 eb19f507a94d0d9cc412cc20aa7416d6 220 SUPERFAMILY SSF56317 16 183 1.09E-23 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS00145 eb19f507a94d0d9cc412cc20aa7416d6 220 PANTHER PTHR23088 79 182 1.6E-16 T 23-04-2016 CFF04554_RS00145 eb19f507a94d0d9cc412cc20aa7416d6 220 Gene3D G3DSA:3.60.110.10 72 199 3.0E-24 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS00145 eb19f507a94d0d9cc412cc20aa7416d6 220 Pfam PF00795 Carbon-nitrogen hydrolase 79 183 1.8E-10 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS03420 f1ec5662f16806bda5c56567c69229be 257 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 2 257 1.0E-80 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CFF04554_RS03420 f1ec5662f16806bda5c56567c69229be 257 PANTHER PTHR30456:SF0 1 163 2.0E-86 T 23-04-2016 CFF04554_RS03420 f1ec5662f16806bda5c56567c69229be 257 PANTHER PTHR30456:SF0 187 257 2.0E-86 T 23-04-2016 CFF04554_RS03420 f1ec5662f16806bda5c56567c69229be 257 PANTHER PTHR30456 1 163 2.0E-86 T 23-04-2016 CFF04554_RS03420 f1ec5662f16806bda5c56567c69229be 257 PANTHER PTHR30456 187 257 2.0E-86 T 23-04-2016 CFF04554_RS03420 f1ec5662f16806bda5c56567c69229be 257 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 257 88.973 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CFF04554_RS03420 f1ec5662f16806bda5c56567c69229be 257 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 2 255 8.0E-88 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CFF04554_RS03420 f1ec5662f16806bda5c56567c69229be 257 SUPERFAMILY SSF63892 1 256 1.44E-78 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CFF04554_RS03420 f1ec5662f16806bda5c56567c69229be 257 Gene3D G3DSA:3.20.20.70 1 256 9.3E-90 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS01365 e188bf3e6fa309308193c79ff2a8bb44 204 Pfam PF01725 Ham1 family 3 190 2.1E-41 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CFF04554_RS01365 e188bf3e6fa309308193c79ff2a8bb44 204 SUPERFAMILY SSF52972 2 197 1.65E-49 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CFF04554_RS01365 e188bf3e6fa309308193c79ff2a8bb44 204 PANTHER PTHR11067 1 204 7.6E-37 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CFF04554_RS01365 e188bf3e6fa309308193c79ff2a8bb44 204 PANTHER PTHR11067:SF9 1 204 7.6E-37 T 23-04-2016 CFF04554_RS01365 e188bf3e6fa309308193c79ff2a8bb44 204 Gene3D G3DSA:3.90.950.10 2 198 6.9E-52 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CFF04554_RS01365 e188bf3e6fa309308193c79ff2a8bb44 204 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 197 39.067 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CFF04554_RS01900 236be542c4e3227cc5277da3f92337dd 221 PANTHER PTHR10422 37 156 4.7E-45 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CFF04554_RS01900 236be542c4e3227cc5277da3f92337dd 221 PANTHER PTHR10422:SF23 37 156 4.7E-45 T 23-04-2016 CFF04554_RS01900 236be542c4e3227cc5277da3f92337dd 221 Gene3D G3DSA:1.10.760.10 195 221 1.4E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01900 236be542c4e3227cc5277da3f92337dd 221 Gene3D G3DSA:1.10.760.10 14 152 1.4E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01900 236be542c4e3227cc5277da3f92337dd 221 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 220 9.2E-88 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CFF04554_RS01900 236be542c4e3227cc5277da3f92337dd 221 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 220 3.2E-85 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CFF04554_RS01900 236be542c4e3227cc5277da3f92337dd 221 SUPERFAMILY SSF46626 183 221 1.16E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01900 236be542c4e3227cc5277da3f92337dd 221 SUPERFAMILY SSF46626 15 151 1.16E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS08095 fe264f4869f7a985d8b29227955b2908 147 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 25 144 4.7E-17 T 23-04-2016 IPR027565 Cupin fold metalloprotein, WbuC family CFF04554_RS08210 16e43bc7652536b304c68ac33e34faf0 454 SUPERFAMILY SSF52266 207 363 1.92E-10 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CFF04554_RS08210 16e43bc7652536b304c68ac33e34faf0 454 SUPERFAMILY SSF52266 424 446 1.92E-10 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CFF04554_RS08210 16e43bc7652536b304c68ac33e34faf0 454 Gene3D G3DSA:3.40.50.1110 206 377 1.2E-16 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CFF04554_RS08210 16e43bc7652536b304c68ac33e34faf0 454 Gene3D G3DSA:3.40.50.1110 424 450 1.2E-16 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CFF04554_RS03040 e684b45d9bb5d7cfca0c9227ca96ad21 65 Pfam PF02609 Exonuclease VII small subunit 8 58 2.8E-13 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CFF04554_RS03040 e684b45d9bb5d7cfca0c9227ca96ad21 65 Gene3D G3DSA:1.10.287.1040 2 63 1.0E-13 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CFF04554_RS03040 e684b45d9bb5d7cfca0c9227ca96ad21 65 SUPERFAMILY SSF116842 2 64 1.31E-13 T 23-04-2016 CFF04554_RS03040 e684b45d9bb5d7cfca0c9227ca96ad21 65 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 60 2.8E-16 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CFF04554_RS02115 130b2260a3ad9283baca1a3423027c5b 185 SUPERFAMILY SSF55729 1 172 6.08E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS02115 130b2260a3ad9283baca1a3423027c5b 185 PANTHER PTHR23091 103 184 3.5E-13 T 23-04-2016 CFF04554_RS02115 130b2260a3ad9283baca1a3423027c5b 185 PANTHER PTHR23091 1 76 3.5E-13 T 23-04-2016 CFF04554_RS02115 130b2260a3ad9283baca1a3423027c5b 185 Gene3D G3DSA:3.40.630.30 1 184 7.6E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS02115 130b2260a3ad9283baca1a3423027c5b 185 Pfam PF13508 Acetyltransferase (GNAT) domain 55 166 9.0E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 PANTHER PTHR11624:SF20 224 599 1.3E-234 T 23-04-2016 CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 PANTHER PTHR11624:SF20 7 201 1.3E-234 T 23-04-2016 CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 Gene3D G3DSA:3.40.50.920 477 598 4.4E-19 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 2 265 9.5E-104 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 SMART SM00861 301 465 3.1E-57 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 ProSitePatterns PS00802 Transketolase signature 2. 407 423 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 Gene3D G3DSA:3.40.50.970 222 281 3.0E-54 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 Gene3D G3DSA:3.40.50.970 13 178 3.0E-54 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 2 598 6.4E-239 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 Pfam PF02779 Transketolase, pyrimidine binding domain 303 461 1.3E-34 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 ProSitePatterns PS00801 Transketolase signature 1. 19 38 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 Pfam PF02780 Transketolase, C-terminal domain 479 596 2.0E-17 T 23-04-2016 IPR033248 Transketolase, C-terminal domain CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 Gene3D G3DSA:3.40.50.970 282 472 9.9E-66 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 PANTHER PTHR11624 224 599 1.3E-234 T 23-04-2016 IPR033247 Transketolase family CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 PANTHER PTHR11624 7 201 1.3E-234 T 23-04-2016 IPR033247 Transketolase family CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 600 38.703 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 SUPERFAMILY SSF52518 226 363 6.43E-72 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 SUPERFAMILY SSF52518 3 182 6.43E-72 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01315 828f6f7bc06f379df16edb80bf21494f 600 SUPERFAMILY SSF52922 475 598 3.93E-21 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CFF04554_RS03590 9c5e6b39ddc5c353f5a603398dd500e2 278 PANTHER PTHR13767 1 204 1.1E-51 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03590 9c5e6b39ddc5c353f5a603398dd500e2 278 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 25 172 3.7E-44 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CFF04554_RS03590 9c5e6b39ddc5c353f5a603398dd500e2 278 SUPERFAMILY SSF55120 3 218 5.28E-62 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03590 9c5e6b39ddc5c353f5a603398dd500e2 278 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 3 273 13.274 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03590 9c5e6b39ddc5c353f5a603398dd500e2 278 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 6 207 3.6E-51 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS08280 7246e143c464190685a7c65b3ea312d9 661 Pfam PF01973 Protein of unknown function DUF115 236 408 6.0E-40 T 23-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CFF04554_RS08280 7246e143c464190685a7c65b3ea312d9 661 PANTHER PTHR41786:SF1 23 648 4.4E-15 T 23-04-2016 CFF04554_RS08280 7246e143c464190685a7c65b3ea312d9 661 PANTHER PTHR41786 23 648 4.4E-15 T 23-04-2016 CFF04554_RS07535 d8429d2b5a10ae8082cdbe562204da8f 72 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 21 1.5E-4 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS07535 d8429d2b5a10ae8082cdbe562204da8f 72 SUPERFAMILY SSF54523 5 69 3.3E-13 T 23-04-2016 CFF04554_RS07535 d8429d2b5a10ae8082cdbe562204da8f 72 Gene3D G3DSA:3.30.700.10 5 68 2.9E-8 T 23-04-2016 CFF04554_RS07535 d8429d2b5a10ae8082cdbe562204da8f 72 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 2.6E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS04665 5cff3170e35ec563852d910b172037dc 262 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 79 238 3.5E-27 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CFF04554_RS04665 5cff3170e35ec563852d910b172037dc 262 PANTHER PTHR30134:SF0 1 20 1.9E-118 T 23-04-2016 CFF04554_RS04665 5cff3170e35ec563852d910b172037dc 262 PANTHER PTHR30134:SF0 37 258 1.9E-118 T 23-04-2016 CFF04554_RS04665 5cff3170e35ec563852d910b172037dc 262 SUPERFAMILY SSF52540 49 256 2.98E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04665 5cff3170e35ec563852d910b172037dc 262 PANTHER PTHR30134 1 20 1.9E-118 T 23-04-2016 CFF04554_RS04665 5cff3170e35ec563852d910b172037dc 262 PANTHER PTHR30134 37 258 1.9E-118 T 23-04-2016 CFF04554_RS04665 5cff3170e35ec563852d910b172037dc 262 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 50 259 6.7E-87 T 23-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CFF04554_RS04665 5cff3170e35ec563852d910b172037dc 262 Gene3D G3DSA:3.40.50.300 82 170 1.5E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04665 5cff3170e35ec563852d910b172037dc 262 PIRSF PIRSF005624 42 262 2.5E-89 T 23-04-2016 CFF04554_RS04120 ef73a2e16886162c005ff5eeddfbc198 278 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 20 106 2.9E-24 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CFF04554_RS04120 ef73a2e16886162c005ff5eeddfbc198 278 Gene3D G3DSA:3.20.20.70 128 263 2.1E-59 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS04120 ef73a2e16886162c005ff5eeddfbc198 278 PANTHER PTHR32179 5 272 1.3E-114 T 23-04-2016 CFF04554_RS04120 ef73a2e16886162c005ff5eeddfbc198 278 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 12 272 5.4E-92 T 23-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 CFF04554_RS04120 ef73a2e16886162c005ff5eeddfbc198 278 PIRSF PIRSF006250 1 275 4.2E-86 T 23-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CFF04554_RS04120 ef73a2e16886162c005ff5eeddfbc198 278 Gene3D G3DSA:3.90.1170.20 3 127 7.9E-37 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CFF04554_RS04120 ef73a2e16886162c005ff5eeddfbc198 278 SUPERFAMILY SSF54675 3 107 5.89E-26 T 23-04-2016 CFF04554_RS04120 ef73a2e16886162c005ff5eeddfbc198 278 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 108 272 1.6E-59 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CFF04554_RS04120 ef73a2e16886162c005ff5eeddfbc198 278 SUPERFAMILY SSF51690 108 272 9.81E-56 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CFF04554_RS05370 a141de5b7da5b9ab6cf3c681000dbd85 321 SUPERFAMILY SSF55073 174 319 7.85E-34 T 23-04-2016 IPR029787 Nucleotide cyclase CFF04554_RS05370 a141de5b7da5b9ab6cf3c681000dbd85 321 PANTHER PTHR10799 196 316 7.1E-16 T 23-04-2016 CFF04554_RS05370 a141de5b7da5b9ab6cf3c681000dbd85 321 PANTHER PTHR10799 1 93 7.1E-16 T 23-04-2016 CFF04554_RS05370 a141de5b7da5b9ab6cf3c681000dbd85 321 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 316 1.4E-33 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS05370 a141de5b7da5b9ab6cf3c681000dbd85 321 PANTHER PTHR10799:SF750 196 316 7.1E-16 T 23-04-2016 CFF04554_RS05370 a141de5b7da5b9ab6cf3c681000dbd85 321 PANTHER PTHR10799:SF750 1 93 7.1E-16 T 23-04-2016 CFF04554_RS05370 a141de5b7da5b9ab6cf3c681000dbd85 321 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 167 319 6.9E-36 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS05370 a141de5b7da5b9ab6cf3c681000dbd85 321 Gene3D G3DSA:3.30.70.270 171 319 8.1E-35 T 23-04-2016 CFF04554_RS05370 a141de5b7da5b9ab6cf3c681000dbd85 321 SMART SM00267 158 321 2.0E-35 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS04425 a47bd186ead643d6035b2536876d9211 244 PANTHER PTHR30296 4 244 9.9E-70 T 23-04-2016 CFF04554_RS04425 a47bd186ead643d6035b2536876d9211 244 PANTHER PTHR30296:SF0 4 244 9.9E-70 T 23-04-2016 CFF04554_RS04425 a47bd186ead643d6035b2536876d9211 244 Pfam PF02754 Cysteine-rich domain 7 85 5.8E-11 T 23-04-2016 IPR004017 Cysteine-rich domain CFF04554_RS04425 a47bd186ead643d6035b2536876d9211 244 Pfam PF02754 Cysteine-rich domain 131 215 4.7E-17 T 23-04-2016 IPR004017 Cysteine-rich domain CFF04554_RS01985 09c1bc8cedb9fb652fa3bdfa378af8ff 406 SUPERFAMILY SSF56935 24 230 3.97E-20 T 23-04-2016 CFF04554_RS01985 09c1bc8cedb9fb652fa3bdfa378af8ff 406 SUPERFAMILY SSF56935 263 406 3.97E-20 T 23-04-2016 CFF04554_RS01985 09c1bc8cedb9fb652fa3bdfa378af8ff 406 Pfam PF05538 Campylobacter major outer membrane protein 1 406 1.3E-111 T 23-04-2016 IPR008439 Campylobacter major outer membrane CFF04554_RS01985 09c1bc8cedb9fb652fa3bdfa378af8ff 406 Gene3D G3DSA:2.40.160.10 33 144 1.0E-18 T 23-04-2016 IPR023614 Porin domain CFF04554_RS01985 09c1bc8cedb9fb652fa3bdfa378af8ff 406 Gene3D G3DSA:2.40.160.10 201 406 1.0E-18 T 23-04-2016 IPR023614 Porin domain CFF04554_RS01615 7896e8e2a1f4040ef119afc55ed200ce 140 SUPERFAMILY SSF55821 16 133 1.43E-10 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CFF04554_RS01615 7896e8e2a1f4040ef119afc55ed200ce 140 Gene3D G3DSA:3.90.870.10 16 103 6.4E-8 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CFF04554_RS03745 4c2fe8cf91076984e50a2e7dfbb26677 547 PANTHER PTHR34597 3 547 3.6E-62 T 23-04-2016 CFF04554_RS03745 4c2fe8cf91076984e50a2e7dfbb26677 547 Pfam PF08479 POTRA domain, ShlB-type 70 138 2.4E-9 T 23-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type CFF04554_RS03745 4c2fe8cf91076984e50a2e7dfbb26677 547 Gene3D G3DSA:3.10.20.310 66 141 7.1E-17 T 23-04-2016 CFF04554_RS03745 4c2fe8cf91076984e50a2e7dfbb26677 547 PIRSF PIRSF029745 1 547 4.0E-155 T 23-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 CFF04554_RS03745 4c2fe8cf91076984e50a2e7dfbb26677 547 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 161 492 4.7E-12 T 23-04-2016 IPR005565 Haemolysin activator HlyB CFF04554_RS03745 4c2fe8cf91076984e50a2e7dfbb26677 547 Gene3D G3DSA:2.40.160.50 173 547 1.1E-71 T 23-04-2016 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 773 93.803 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 373 393 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 182 197 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 470 479 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 726 738 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 742 758 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 359 373 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 197 210 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 311 327 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 221 243 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR01159 DNA gyrase subunit B signature 8 18 2.0E-58 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR00418 DNA topoisomerase II family signature 267 280 1.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR00418 DNA topoisomerase II family signature 524 536 1.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR00418 DNA topoisomerase II family signature 115 129 1.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR00418 DNA topoisomerase II family signature 504 521 1.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR00418 DNA topoisomerase II family signature 420 434 1.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR00418 DNA topoisomerase II family signature 486 502 1.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR00418 DNA topoisomerase II family signature 705 721 1.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR00418 DNA topoisomerase II family signature 72 85 1.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PRINTS PR00418 DNA topoisomerase II family signature 37 52 1.6E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 Gene3D G3DSA:3.30.230.10 221 391 2.2E-62 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 Gene3D G3DSA:3.40.50.670 690 755 4.3E-94 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 Gene3D G3DSA:3.40.50.670 404 549 4.3E-94 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PANTHER PTHR10169 6 552 4.3E-271 T 23-04-2016 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 PANTHER PTHR10169 690 773 4.3E-271 T 23-04-2016 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 SMART SM00433 37 766 3.1E-272 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 176 1.7E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 SUPERFAMILY SSF55874 8 219 5.89E-69 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 SUPERFAMILY SSF54211 222 390 4.93E-52 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 SUPERFAMILY SSF56719 699 768 2.62E-85 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 SUPERFAMILY SSF56719 396 559 2.62E-85 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 773 3.2E-292 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 Gene3D G3DSA:3.30.565.10 8 219 6.0E-88 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 701 762 1.5E-27 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 Pfam PF01751 Toprim domain 419 529 7.4E-19 T 23-04-2016 IPR006171 Toprim domain CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 Pfam PF00204 DNA gyrase B 222 389 7.2E-56 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 CFF04554_RS00015 b04e17af2cb88c037e7c3cb74e3bb347 773 SMART SM00387 33 177 6.6E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS06140 0fb9a7423b35f3220190b8b5c33b7613 239 SUPERFAMILY SSF110997 163 226 3.4E-9 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CFF04554_RS06140 0fb9a7423b35f3220190b8b5c33b7613 239 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 53 152 1.2E-52 T 23-04-2016 IPR012997 Rare lipoprotein A CFF04554_RS06140 0fb9a7423b35f3220190b8b5c33b7613 239 PANTHER PTHR34183:SF2 20 143 5.5E-51 T 23-04-2016 CFF04554_RS06140 0fb9a7423b35f3220190b8b5c33b7613 239 PANTHER PTHR34183 20 143 5.5E-51 T 23-04-2016 CFF04554_RS06140 0fb9a7423b35f3220190b8b5c33b7613 239 SUPERFAMILY SSF50685 52 139 4.53E-11 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CFF04554_RS06140 0fb9a7423b35f3220190b8b5c33b7613 239 Gene3D G3DSA:3.30.70.1070 162 222 1.4E-8 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CFF04554_RS06140 0fb9a7423b35f3220190b8b5c33b7613 239 Pfam PF05036 Sporulation related domain 164 236 9.1E-12 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CFF04554_RS06140 0fb9a7423b35f3220190b8b5c33b7613 239 Pfam PF03330 Lytic transglycolase 50 139 1.0E-27 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CFF04554_RS06140 0fb9a7423b35f3220190b8b5c33b7613 239 Gene3D G3DSA:2.40.40.10 67 140 2.4E-5 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CFF04554_RS04235 9d55ae2eef17b507883269a92aeb0954 394 PANTHER PTHR30474 252 393 6.1E-70 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CFF04554_RS04235 9d55ae2eef17b507883269a92aeb0954 394 PANTHER PTHR30474 3 236 6.1E-70 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CFF04554_RS04235 9d55ae2eef17b507883269a92aeb0954 394 Pfam PF01098 Cell cycle protein 7 391 3.3E-80 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CFF04554_RS05240 a04fabc4bbd2da5beb041e9a8bf7bf70 662 Gene3D G3DSA:2.40.170.20 152 662 5.1E-47 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS05240 a04fabc4bbd2da5beb041e9a8bf7bf70 662 Gene3D G3DSA:2.170.130.10 26 149 4.9E-11 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS05240 a04fabc4bbd2da5beb041e9a8bf7bf70 662 SUPERFAMILY SSF56935 38 662 8.24E-65 T 23-04-2016 CFF04554_RS05240 a04fabc4bbd2da5beb041e9a8bf7bf70 662 PANTHER PTHR32552:SF12 30 662 7.0E-68 T 23-04-2016 CFF04554_RS05240 a04fabc4bbd2da5beb041e9a8bf7bf70 662 PANTHER PTHR32552 30 662 7.0E-68 T 23-04-2016 CFF04554_RS05240 a04fabc4bbd2da5beb041e9a8bf7bf70 662 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 148 5.5E-7 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 PANTHER PTHR11911 296 481 6.9E-231 T 23-04-2016 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 PANTHER PTHR11911 1 278 6.9E-231 T 23-04-2016 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 291 303 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 SMART SM00116 95 143 1.0E-11 T 23-04-2016 IPR000644 CBS domain CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 SMART SM00116 156 204 1.5E-5 T 23-04-2016 IPR000644 CBS domain CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 Pfam PF00571 CBS domain 95 139 6.7E-13 T 23-04-2016 IPR000644 CBS domain CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 Pfam PF00571 CBS domain 148 200 4.1E-10 T 23-04-2016 IPR000644 CBS domain CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 450 2.2E-188 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 469 2.5E-160 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 PANTHER PTHR11911:SF6 296 481 6.9E-231 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 PANTHER PTHR11911:SF6 1 278 6.9E-231 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 PIRSF PIRSF000130 1 483 3.9E-205 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 SUPERFAMILY SSF54631 62 201 1.77E-32 T 23-04-2016 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 482 83.185 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 SMART SM01240 6 469 0.0 T 23-04-2016 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 SUPERFAMILY SSF51412 2 89 1.01E-121 T 23-04-2016 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 SUPERFAMILY SSF51412 215 473 1.01E-121 T 23-04-2016 CFF04554_RS03030 786f10bd409a000cfb765c0cc6ee2ae7 483 Gene3D G3DSA:3.20.20.70 3 481 4.4E-198 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS04420 4b5bd7592fd717d5d6732d3a5bf47e7b 172 Gene3D G3DSA:1.20.1540.10 4 168 2.0E-32 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CFF04554_RS04420 4b5bd7592fd717d5d6732d3a5bf47e7b 172 SUPERFAMILY SSF144091 3 169 1.7E-37 T 23-04-2016 CFF04554_RS04420 4b5bd7592fd717d5d6732d3a5bf47e7b 172 PANTHER PTHR22936 7 168 5.7E-21 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 CFF04554_RS04420 4b5bd7592fd717d5d6732d3a5bf47e7b 172 Pfam PF01694 Rhomboid family 39 168 1.0E-26 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PRINTS PR00477 Phosphoglycerate kinase family signature 374 391 4.4E-81 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PRINTS PR00477 Phosphoglycerate kinase family signature 173 195 4.4E-81 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PRINTS PR00477 Phosphoglycerate kinase family signature 196 215 4.4E-81 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 4.4E-81 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PRINTS PR00477 Phosphoglycerate kinase family signature 12 28 4.4E-81 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PRINTS PR00477 Phosphoglycerate kinase family signature 34 56 4.4E-81 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PRINTS PR00477 Phosphoglycerate kinase family signature 351 362 4.4E-81 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 4.4E-81 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PRINTS PR00477 Phosphoglycerate kinase family signature 318 343 4.4E-81 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 Pfam PF00162 Phosphoglycerate kinase 7 388 2.6E-147 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 Gene3D G3DSA:3.40.50.1270 186 386 1.1E-79 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 Gene3D G3DSA:3.40.50.1260 6 183 1.7E-65 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PANTHER PTHR11406 1 396 6.8E-193 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 PIRSF PIRSF000724 1 401 4.4E-143 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 398 39.369 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS07275 ddb242e58b925719b589cc553619a12c 401 SUPERFAMILY SSF53748 5 396 2.36E-141 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CFF04554_RS00190 a7e117090f3d2fd84275db3b4874d600 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 78 102 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00190 a7e117090f3d2fd84275db3b4874d600 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 105 23.567 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CFF04554_RS00190 a7e117090f3d2fd84275db3b4874d600 110 Pfam PF00237 Ribosomal protein L22p/L17e 7 102 1.8E-22 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00190 a7e117090f3d2fd84275db3b4874d600 110 SUPERFAMILY SSF54843 3 104 1.57E-31 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00190 a7e117090f3d2fd84275db3b4874d600 110 PANTHER PTHR13501 3 103 5.0E-30 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CFF04554_RS00190 a7e117090f3d2fd84275db3b4874d600 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 4 102 7.0E-34 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CFF04554_RS00190 a7e117090f3d2fd84275db3b4874d600 110 Gene3D G3DSA:3.90.470.10 2 104 7.0E-31 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS02880 321af806d1a619bfaae6cce12e22e92c 380 SUPERFAMILY SSF103473 6 378 8.37E-47 T 23-04-2016 IPR020846 Major facilitator superfamily domain CFF04554_RS02880 321af806d1a619bfaae6cce12e22e92c 380 Gene3D G3DSA:1.20.1250.20 188 378 2.9E-9 T 23-04-2016 CFF04554_RS02880 321af806d1a619bfaae6cce12e22e92c 380 Gene3D G3DSA:1.20.1250.20 6 178 6.2E-23 T 23-04-2016 CFF04554_RS02880 321af806d1a619bfaae6cce12e22e92c 380 PANTHER PTHR23501:SF80 7 376 4.9E-35 T 23-04-2016 CFF04554_RS02880 321af806d1a619bfaae6cce12e22e92c 380 PANTHER PTHR23501 7 376 4.9E-35 T 23-04-2016 CFF04554_RS02880 321af806d1a619bfaae6cce12e22e92c 380 Pfam PF07690 Major Facilitator Superfamily 10 341 2.6E-29 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 Pfam PF01595 Domain of unknown function DUF21 3 196 5.2E-43 T 23-04-2016 IPR002550 Domain of unknown function DUF21 CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 Pfam PF00571 CBS domain 283 332 1.9E-8 T 23-04-2016 IPR000644 CBS domain CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 Pfam PF00571 CBS domain 214 268 1.0E-4 T 23-04-2016 IPR000644 CBS domain CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 Gene3D G3DSA:3.10.580.10 199 340 1.1E-21 T 23-04-2016 CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 SMART SM00116 222 271 2.3 T 23-04-2016 IPR000644 CBS domain CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 SMART SM00116 284 332 0.0015 T 23-04-2016 IPR000644 CBS domain CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 Gene3D G3DSA:3.30.465.10 341 426 1.6E-20 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 SMART SM01091 347 426 3.3E-22 T 23-04-2016 IPR005170 Transporter-associated domain CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 SUPERFAMILY SSF56176 346 424 3.82E-17 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 PANTHER PTHR22777 2 431 5.2E-156 T 23-04-2016 CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 Pfam PF03471 Transporter associated domain 348 424 1.2E-17 T 23-04-2016 IPR005170 Transporter-associated domain CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 SUPERFAMILY SSF54631 200 335 3.9E-29 T 23-04-2016 CFF04554_RS00750 7431f78ca7a164417939d414db75ecc9 433 PANTHER PTHR22777:SF18 2 431 5.2E-156 T 23-04-2016 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 PANTHER PTHR30034:SF0 1 344 3.7E-96 T 23-04-2016 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 SUPERFAMILY SSF103039 47 231 5.75E-28 T 23-04-2016 IPR028976 CheC-like domain CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 PANTHER PTHR30034 1 344 3.7E-96 T 23-04-2016 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 SUPERFAMILY SSF101801 251 329 1.12E-14 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 Gene3D G3DSA:3.40.1550.10 48 212 2.6E-6 T 23-04-2016 IPR028976 CheC-like domain CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 324 2.7E-105 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 2.7E-29 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 PRINTS PR00955 Flagellar motor switch protein FliM signature 92 108 2.7E-29 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 2.7E-29 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 PRINTS PR00955 Flagellar motor switch protein FliM signature 117 136 2.7E-29 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 PIRSF PIRSF002888 1 361 2.3E-112 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 Gene3D G3DSA:2.30.330.10 243 328 1.5E-11 T 23-04-2016 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 Pfam PF02154 Flagellar motor switch protein FliM 41 231 3.2E-75 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CFF04554_RS07695 cf06d5dda2c1772c788b2f655d12eed0 363 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 255 324 7.8E-16 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) CFF04554_RS02610 5b1af597a1fc72a629faea7ccbbf3afa 376 Pfam PF12704 MacB-like periplasmic core domain 23 193 3.5E-10 T 23-04-2016 IPR025857 MacB-like periplasmic core domain CFF04554_RS02610 5b1af597a1fc72a629faea7ccbbf3afa 376 Pfam PF02687 FtsX-like permease family 256 369 2.1E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CFF04554_RS02610 5b1af597a1fc72a629faea7ccbbf3afa 376 PANTHER PTHR30489 1 376 9.2E-31 T 23-04-2016 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 Gene3D G3DSA:3.30.420.40 1 203 1.8E-8 T 23-04-2016 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 Pfam PF00871 Acetokinase family 2 388 2.2E-149 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 PANTHER PTHR21060:SF11 1 399 3.3E-196 T 23-04-2016 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 PRINTS PR00471 Acetate kinase family signature 375 387 2.7E-44 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 PRINTS PR00471 Acetate kinase family signature 3 14 2.7E-44 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 PRINTS PR00471 Acetate kinase family signature 172 185 2.7E-44 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 PRINTS PR00471 Acetate kinase family signature 202 223 2.7E-44 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 PRINTS PR00471 Acetate kinase family signature 298 311 2.7E-44 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 PRINTS PR00471 Acetate kinase family signature 320 336 2.7E-44 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 Gene3D G3DSA:3.30.420.40 204 393 1.3E-78 T 23-04-2016 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 SUPERFAMILY SSF53067 1 194 4.92E-65 T 23-04-2016 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 PANTHER PTHR21060 1 399 3.3E-196 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 Hamap MF_00020 Acetate kinase [ackA]. 1 397 176.877 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 SUPERFAMILY SSF53067 157 395 1.79E-86 T 23-04-2016 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 PIRSF PIRSF000722 1 398 2.2E-151 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS04075 b0603b3de80709ebcb5665c896309853 399 TIGRFAM TIGR00016 ackA: acetate kinase 1 394 1.7E-155 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CFF04554_RS02335 a9b03a3c71d7d11bc7484266b7f2b946 178 Gene3D G3DSA:3.40.50.10610 18 176 8.4E-11 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component CFF04554_RS02335 a9b03a3c71d7d11bc7484266b7f2b946 178 SUPERFAMILY SSF159594 25 175 6.8E-11 T 23-04-2016 CFF04554_RS07940 8f594d7f8e03237fd9139ce74ca1ce92 275 SUPERFAMILY SSF109998 20 158 3.14E-22 T 23-04-2016 IPR027304 Trigger factor/SurA domain CFF04554_RS07940 8f594d7f8e03237fd9139ce74ca1ce92 275 Pfam PF13624 SurA N-terminal domain 39 122 2.3E-7 T 23-04-2016 CFF04554_RS07645 f99e624a9ed80bd514c0ae2d7166d315 221 PANTHER PTHR30212 1 209 7.3E-44 T 23-04-2016 CFF04554_RS07645 f99e624a9ed80bd514c0ae2d7166d315 221 Pfam PF03473 MOSC domain 48 159 1.5E-17 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CFF04554_RS07645 f99e624a9ed80bd514c0ae2d7166d315 221 SUPERFAMILY SSF50800 2 217 1.99E-61 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain CFF04554_RS07645 f99e624a9ed80bd514c0ae2d7166d315 221 Gene3D G3DSA:2.40.33.20 1 211 1.2E-64 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like CFF04554_RS07645 f99e624a9ed80bd514c0ae2d7166d315 221 PANTHER PTHR30212:SF2 1 209 7.3E-44 T 23-04-2016 CFF04554_RS01415 089aa54f7fa718462abeab3606acb932 236 Gene3D G3DSA:3.30.1150.10 154 236 7.4E-6 T 23-04-2016 CFF04554_RS01415 089aa54f7fa718462abeab3606acb932 236 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 164 235 7.0E-10 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CFF04554_RS01415 089aa54f7fa718462abeab3606acb932 236 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 162 234 5.2E-11 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CFF04554_RS01415 089aa54f7fa718462abeab3606acb932 236 SUPERFAMILY SSF74653 161 215 4.97E-9 T 23-04-2016 CFF04554_RS06085 cbeab96caddcf1e893197b48c78ca3f7 390 PANTHER PTHR23521 4 365 4.9E-53 T 23-04-2016 CFF04554_RS06085 cbeab96caddcf1e893197b48c78ca3f7 390 PANTHER PTHR23521:SF2 4 365 4.9E-53 T 23-04-2016 CFF04554_RS06085 cbeab96caddcf1e893197b48c78ca3f7 390 Gene3D G3DSA:1.20.1250.20 190 363 9.2E-18 T 23-04-2016 CFF04554_RS06085 cbeab96caddcf1e893197b48c78ca3f7 390 Gene3D G3DSA:1.20.1250.20 3 167 9.6E-14 T 23-04-2016 CFF04554_RS06085 cbeab96caddcf1e893197b48c78ca3f7 390 Pfam PF07690 Major Facilitator Superfamily 5 301 2.5E-19 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CFF04554_RS06085 cbeab96caddcf1e893197b48c78ca3f7 390 SUPERFAMILY SSF103473 3 360 9.16E-34 T 23-04-2016 IPR020846 Major facilitator superfamily domain CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 PANTHER PTHR19384 3 114 5.9E-34 T 23-04-2016 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 PANTHER PTHR19384 134 158 5.9E-34 T 23-04-2016 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 TIGRFAM TIGR01752 flav_long: flavodoxin 2 161 4.9E-62 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 PIRSF PIRSF038996 1 162 1.3E-58 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 Pfam PF00258 Flavodoxin 4 153 9.7E-26 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 SUPERFAMILY SSF52218 3 159 2.97E-42 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 PRINTS PR00369 Flavodoxin signature 74 84 1.1E-5 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 PRINTS PR00369 Flavodoxin signature 47 58 1.1E-5 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 PRINTS PR00369 Flavodoxin signature 3 16 1.1E-5 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 PANTHER PTHR19384:SF73 3 114 5.9E-34 T 23-04-2016 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 PANTHER PTHR19384:SF73 134 158 5.9E-34 T 23-04-2016 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 ProSitePatterns PS00201 Flavodoxin signature. 4 20 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CFF04554_RS00555 f79bc7c5eefbf05daf39db9d4641c592 162 Gene3D G3DSA:3.40.50.360 2 161 1.1E-51 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS02635 3f42ddca544c7effbd0c9c729514c8b8 289 SUPERFAMILY SSF56317 1 285 2.22E-78 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS02635 3f42ddca544c7effbd0c9c729514c8b8 289 PANTHER PTHR23088:SF11 1 286 5.8E-115 T 23-04-2016 CFF04554_RS02635 3f42ddca544c7effbd0c9c729514c8b8 289 PANTHER PTHR23088 1 286 5.8E-115 T 23-04-2016 CFF04554_RS02635 3f42ddca544c7effbd0c9c729514c8b8 289 Gene3D G3DSA:3.60.110.10 1 285 2.1E-95 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS02635 3f42ddca544c7effbd0c9c729514c8b8 289 Pfam PF00795 Carbon-nitrogen hydrolase 2 267 2.9E-49 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS07755 9a331482ee361196bce1bb85ae849f25 129 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 124 18.781 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07755 9a331482ee361196bce1bb85ae849f25 129 Gene3D G3DSA:2.60.15.10 1 85 8.8E-29 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07755 9a331482ee361196bce1bb85ae849f25 129 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 3.9E-28 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07755 9a331482ee361196bce1bb85ae849f25 129 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 84 4.0E-19 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07755 9a331482ee361196bce1bb85ae849f25 129 SUPERFAMILY SSF51344 2 84 1.57E-24 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07755 9a331482ee361196bce1bb85ae849f25 129 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 125 4.8E-35 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS07755 9a331482ee361196bce1bb85ae849f25 129 PANTHER PTHR13822 1 123 3.9E-23 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CFF04554_RS03170 bfe4089b700c3aa77171589d9eefddf0 258 PANTHER PTHR22854 2 255 1.6E-90 T 23-04-2016 CFF04554_RS03170 bfe4089b700c3aa77171589d9eefddf0 258 PANTHER PTHR22854:SF2 2 255 1.6E-90 T 23-04-2016 CFF04554_RS03170 bfe4089b700c3aa77171589d9eefddf0 258 Gene3D G3DSA:3.20.20.70 2 257 1.8E-91 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS03170 bfe4089b700c3aa77171589d9eefddf0 258 SUPERFAMILY SSF51366 11 256 1.18E-82 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CFF04554_RS03170 bfe4089b700c3aa77171589d9eefddf0 258 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 254 1.9E-83 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CFF04554_RS03170 bfe4089b700c3aa77171589d9eefddf0 258 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 257 33.154 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CFF04554_RS03170 bfe4089b700c3aa77171589d9eefddf0 258 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 69 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CFF04554_RS05895 79b22cd26e97d48a4df6935624e86d1e 414 Pfam PF00464 Serine hydroxymethyltransferase 3 378 1.1E-174 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CFF04554_RS05895 79b22cd26e97d48a4df6935624e86d1e 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 216 232 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CFF04554_RS05895 79b22cd26e97d48a4df6935624e86d1e 414 PANTHER PTHR11680 2 413 3.4E-236 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CFF04554_RS05895 79b22cd26e97d48a4df6935624e86d1e 414 PIRSF PIRSF000412 1 411 1.4E-160 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CFF04554_RS05895 79b22cd26e97d48a4df6935624e86d1e 414 SUPERFAMILY SSF53383 3 410 3.84E-172 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS05895 79b22cd26e97d48a4df6935624e86d1e 414 Gene3D G3DSA:3.90.1150.10 279 410 1.7E-49 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS05895 79b22cd26e97d48a4df6935624e86d1e 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 2 410 50.042 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CFF04554_RS05895 79b22cd26e97d48a4df6935624e86d1e 414 Gene3D G3DSA:3.40.640.10 32 278 4.1E-98 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS05730 36f72a7082674832ab6d8d8c5fca447b 135 Pfam PF13343 Bacterial extracellular solute-binding protein 83 134 1.5E-6 T 23-04-2016 CFF04554_RS05730 36f72a7082674832ab6d8d8c5fca447b 135 PANTHER PTHR30006:SF10 1 135 4.5E-26 T 23-04-2016 CFF04554_RS05730 36f72a7082674832ab6d8d8c5fca447b 135 PANTHER PTHR30006 1 135 4.5E-26 T 23-04-2016 CFF04554_RS05730 36f72a7082674832ab6d8d8c5fca447b 135 SUPERFAMILY SSF53850 32 134 1.77E-10 T 23-04-2016 CFF04554_RS05730 36f72a7082674832ab6d8d8c5fca447b 135 Gene3D G3DSA:3.40.190.10 5 128 7.8E-10 T 23-04-2016 CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 SUPERFAMILY SSF51735 3 235 1.98E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 Gene3D G3DSA:3.40.50.720 3 233 2.8E-60 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 4.0E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 4.0E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.0E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 4.0E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 4.0E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PIRSF PIRSF000126 1 241 1.5E-54 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 Pfam PF00106 short chain dehydrogenase 4 186 4.2E-51 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PANTHER PTHR24322 148 180 8.3E-68 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PANTHER PTHR24322 7 132 8.3E-68 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PANTHER PTHR24322:SF392 148 180 8.3E-68 T 23-04-2016 CFF04554_RS04870 395b7b4c9c288bf8b2c2402938731aaa 248 PANTHER PTHR24322:SF392 7 132 8.3E-68 T 23-04-2016 CFF04554_RS03570 a56a7b8a8d77365fefa155ccfb4a18d0 198 SUPERFAMILY SSF52833 6 163 5.75E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS03570 a56a7b8a8d77365fefa155ccfb4a18d0 198 Gene3D G3DSA:3.40.30.10 3 164 2.0E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS03570 a56a7b8a8d77365fefa155ccfb4a18d0 198 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CFF04554_RS08290 103f02c89f24b6cd9edb45a6fa7ff201 336 Pfam PF01594 Domain of unknown function DUF20 8 320 6.8E-55 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CFF04554_RS08290 103f02c89f24b6cd9edb45a6fa7ff201 336 PANTHER PTHR21716 6 333 2.7E-86 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CFF04554_RS08290 103f02c89f24b6cd9edb45a6fa7ff201 336 PANTHER PTHR21716:SF17 6 333 2.7E-86 T 23-04-2016 CFF04554_RS06095 4fd6eea1a34eb0a5a9959b97542c37de 87 SUPERFAMILY SSF160544 5 82 5.1E-24 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CFF04554_RS06095 4fd6eea1a34eb0a5a9959b97542c37de 87 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 78 7.3E-20 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CFF04554_RS06095 4fd6eea1a34eb0a5a9959b97542c37de 87 TIGRFAM TIGR00789 flhB_rel: FlhB domain protein 3 84 5.4E-37 T 23-04-2016 IPR004683 Type III secretion system substrate exporter FlhB-like CFF04554_RS06095 4fd6eea1a34eb0a5a9959b97542c37de 87 Gene3D G3DSA:3.40.1690.10 5 82 8.8E-27 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CFF04554_RS06095 4fd6eea1a34eb0a5a9959b97542c37de 87 PANTHER PTHR30531 4 82 1.3E-30 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CFF04554_RS07125 7ad2997d3012646f3e2eaba6c566405b 231 Pfam PF00535 Glycosyl transferase family 2 3 139 6.7E-18 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CFF04554_RS07125 7ad2997d3012646f3e2eaba6c566405b 231 PANTHER PTHR22916 1 130 2.8E-19 T 23-04-2016 CFF04554_RS07125 7ad2997d3012646f3e2eaba6c566405b 231 Gene3D G3DSA:3.90.550.10 2 125 1.5E-18 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS07125 7ad2997d3012646f3e2eaba6c566405b 231 SUPERFAMILY SSF53448 1 145 2.75E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS07620 891ea34047d8929d9879d6bd0ed98725 294 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 270 2.9E-103 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CFF04554_RS07620 891ea34047d8929d9879d6bd0ed98725 294 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 290 5.4E-120 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CFF04554_RS07620 891ea34047d8929d9879d6bd0ed98725 294 Gene3D G3DSA:3.30.1700.10 126 277 6.8E-59 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CFF04554_RS07620 891ea34047d8929d9879d6bd0ed98725 294 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 1 275 45.735 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CFF04554_RS07620 891ea34047d8929d9879d6bd0ed98725 294 SUPERFAMILY SSF54211 130 272 2.5E-50 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS07620 891ea34047d8929d9879d6bd0ed98725 294 SUPERFAMILY SSF54211 2 120 2.96E-36 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS07620 891ea34047d8929d9879d6bd0ed98725 294 Gene3D G3DSA:3.30.230.20 2 122 2.4E-39 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CFF04554_RS07620 891ea34047d8929d9879d6bd0ed98725 294 PANTHER PTHR33694 1 283 1.2E-107 T 23-04-2016 CFF04554_RS07620 891ea34047d8929d9879d6bd0ed98725 294 PANTHER PTHR33694:SF1 1 283 1.2E-107 T 23-04-2016 CFF04554_RS02120 b0b2ae45cc5ddc480cdcedb417ff6d81 413 PANTHER PTHR35334:SF2 6 413 1.2E-154 T 23-04-2016 CFF04554_RS02120 b0b2ae45cc5ddc480cdcedb417ff6d81 413 PANTHER PTHR35334 6 413 1.2E-154 T 23-04-2016 CFF04554_RS02120 b0b2ae45cc5ddc480cdcedb417ff6d81 413 Pfam PF03222 Tryptophan/tyrosine permease family 18 409 4.1E-15 T 23-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 Gene3D G3DSA:2.60.40.10 329 452 1.0E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 Pfam PF12801 4Fe-4S binding domain 68 112 4.2E-13 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 Gene3D G3DSA:3.30.70.20 196 253 4.7E-6 T 23-04-2016 CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 PANTHER PTHR24960 31 369 1.2E-38 T 23-04-2016 CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 SUPERFAMILY SSF54862 79 101 9.07E-20 T 23-04-2016 CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 SUPERFAMILY SSF54862 167 320 9.07E-20 T 23-04-2016 CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 Pfam PF13746 4Fe-4S dicluster domain 193 297 3.0E-39 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 PANTHER PTHR24960:SF45 31 369 1.2E-38 T 23-04-2016 CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 246 257 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 Gene3D G3DSA:3.30.70.20 254 282 0.001 T 23-04-2016 CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 15 451 6.7E-146 T 23-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 CFF04554_RS00610 c3b74de603e6a33e770abe7af9c08b68 467 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 328 452 4.7E-21 T 23-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain CFF04554_RS00625 c94c75e1348483ae1e03ff9833cc325c 113 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 6 89 4.0E-4 T 23-04-2016 IPR010005 Formate hydrogenlyase maturation HycH CFF04554_RS00625 c94c75e1348483ae1e03ff9833cc325c 113 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 2 91 8.2E-12 T 23-04-2016 IPR010005 Formate hydrogenlyase maturation HycH CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 13 710 9.2E-269 T 23-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 PIRSF PIRSF005419 1 715 2.0E-229 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 PANTHER PTHR30161:SF1 10 713 4.0E-287 T 23-04-2016 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 PANTHER PTHR30161 10 713 4.0E-287 T 23-04-2016 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 235 249 1.6E-53 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 154 172 1.6E-53 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 68 87 1.6E-53 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 31 44 1.6E-53 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 184 201 1.6E-53 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 135 151 1.6E-53 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CFF04554_RS05420 a2abff070eb92acfca04ee95d15e76d3 715 Pfam PF00771 FHIPEP family 24 702 6.9E-243 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CFF04554_RS02900 d214351247a8c2b3be44b3bcdd044e85 839 Pfam PF01966 HD domain 483 549 5.7E-6 T 23-04-2016 IPR006674 HD domain CFF04554_RS02900 d214351247a8c2b3be44b3bcdd044e85 839 Gene3D G3DSA:1.10.3210.10 479 605 3.4E-7 T 23-04-2016 IPR006674 HD domain CFF04554_RS02900 d214351247a8c2b3be44b3bcdd044e85 839 Gene3D G3DSA:3.30.460.10 81 176 1.3E-5 T 23-04-2016 CFF04554_RS02900 d214351247a8c2b3be44b3bcdd044e85 839 SUPERFAMILY SSF81301 81 174 8.59E-7 T 23-04-2016 CFF04554_RS02900 d214351247a8c2b3be44b3bcdd044e85 839 SUPERFAMILY SSF81891 482 598 2.47E-7 T 23-04-2016 CFF04554_RS02900 d214351247a8c2b3be44b3bcdd044e85 839 SUPERFAMILY SSF81891 387 452 2.47E-7 T 23-04-2016 CFF04554_RS02900 d214351247a8c2b3be44b3bcdd044e85 839 PANTHER PTHR13734 98 680 6.6E-25 T 23-04-2016 CFF04554_RS02900 d214351247a8c2b3be44b3bcdd044e85 839 PANTHER PTHR13734:SF45 98 680 6.6E-25 T 23-04-2016 CFF04554_RS02900 d214351247a8c2b3be44b3bcdd044e85 839 Pfam PF01909 Nucleotidyltransferase domain 78 130 1.7E-4 T 23-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CFF04554_RS01420 a922995b1452192bc359d457a5c8b2e2 404 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 137 5.1E-28 T 23-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 CFF04554_RS01420 a922995b1452192bc359d457a5c8b2e2 404 SUPERFAMILY SSF51735 2 188 8.63E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01420 a922995b1452192bc359d457a5c8b2e2 404 PANTHER PTHR12286:SF6 1 401 6.2E-156 T 23-04-2016 CFF04554_RS01420 a922995b1452192bc359d457a5c8b2e2 404 PANTHER PTHR12286 1 401 6.2E-156 T 23-04-2016 CFF04554_RS01420 a922995b1452192bc359d457a5c8b2e2 404 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 141 388 6.4E-34 T 23-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal CFF04554_RS01420 a922995b1452192bc359d457a5c8b2e2 404 Gene3D G3DSA:3.40.50.720 1 190 2.1E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS05305 6a4c5942f5224f10910b2547ff7fc96d 176 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 123 175 1.8E-14 T 23-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CFF04554_RS05305 6a4c5942f5224f10910b2547ff7fc96d 176 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 4.8E-16 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CFF04554_RS05305 6a4c5942f5224f10910b2547ff7fc96d 176 SUPERFAMILY SSF69754 4 104 1.06E-22 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CFF04554_RS05305 6a4c5942f5224f10910b2547ff7fc96d 176 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 9.1E-20 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CFF04554_RS05305 6a4c5942f5224f10910b2547ff7fc96d 176 Gene3D G3DSA:3.30.160.100 1 100 9.9E-22 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CFF04554_RS05305 6a4c5942f5224f10910b2547ff7fc96d 176 PANTHER PTHR33231 1 175 2.3E-21 T 23-04-2016 CFF04554_RS08835 c18504cda6f2bd40b0411e8983bbb4a1 530 PANTHER PTHR30255:SF2 19 530 2.2E-156 T 23-04-2016 CFF04554_RS08835 c18504cda6f2bd40b0411e8983bbb4a1 530 PANTHER PTHR30255 19 530 2.2E-156 T 23-04-2016 CFF04554_RS08835 c18504cda6f2bd40b0411e8983bbb4a1 530 Pfam PF02272 DHHA1 domain 339 401 5.7E-11 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CFF04554_RS08835 c18504cda6f2bd40b0411e8983bbb4a1 530 Pfam PF01368 DHH family 52 176 6.9E-12 T 23-04-2016 IPR001667 DDH domain CFF04554_RS08835 c18504cda6f2bd40b0411e8983bbb4a1 530 SUPERFAMILY SSF64182 29 402 7.33E-103 T 23-04-2016 CFF04554_RS08835 c18504cda6f2bd40b0411e8983bbb4a1 530 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 12 522 1.2E-160 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CFF04554_RS00025 70fe5caab1343d3437ab71a6f691b396 146 PIRSF PIRSF027377 1 134 1.5E-47 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS00025 70fe5caab1343d3437ab71a6f691b396 146 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 19 123 8.2E-38 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS00025 70fe5caab1343d3437ab71a6f691b396 146 SUPERFAMILY SSF55620 14 119 3.71E-29 T 23-04-2016 CFF04554_RS00025 70fe5caab1343d3437ab71a6f691b396 146 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 146 42.953 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS00025 70fe5caab1343d3437ab71a6f691b396 146 Gene3D G3DSA:3.30.1130.10 12 125 2.4E-34 T 23-04-2016 CFF04554_RS00025 70fe5caab1343d3437ab71a6f691b396 146 Pfam PF14489 QueF-like protein 50 125 1.2E-29 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CFF04554_RS00025 70fe5caab1343d3437ab71a6f691b396 146 PANTHER PTHR34354:SF1 6 139 4.8E-43 T 23-04-2016 CFF04554_RS00025 70fe5caab1343d3437ab71a6f691b396 146 PANTHER PTHR34354 6 139 4.8E-43 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 PANTHER PTHR11014:SF54 173 253 7.5E-74 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 PANTHER PTHR11014:SF54 2 156 7.5E-74 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 PANTHER PTHR11014:SF54 314 423 7.5E-74 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 Gene3D G3DSA:3.40.630.10 339 423 3.2E-62 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 Gene3D G3DSA:3.40.630.10 2 152 3.2E-62 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 SUPERFAMILY SSF53187 2 149 7.33E-41 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 SUPERFAMILY SSF53187 179 194 7.33E-41 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 SUPERFAMILY SSF53187 332 423 7.33E-41 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 Pfam PF01546 Peptidase family M20/M25/M40 56 420 4.1E-8 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 PRINTS PR00934 X-His dipeptidase (M25) signature 175 192 7.8E-10 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 PRINTS PR00934 X-His dipeptidase (M25) signature 77 95 7.8E-10 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 PANTHER PTHR11014 173 253 7.5E-74 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 PANTHER PTHR11014 2 156 7.5E-74 T 23-04-2016 CFF04554_RS05310 d5364c9de3b2543f69c9cf51eff03bb1 424 PANTHER PTHR11014 314 423 7.5E-74 T 23-04-2016 CFF04554_RS00580 e6a68a049451da42878bbf4114aa576f 335 Pfam PF13343 Bacterial extracellular solute-binding protein 68 299 1.3E-24 T 23-04-2016 CFF04554_RS00580 e6a68a049451da42878bbf4114aa576f 335 Gene3D G3DSA:3.40.190.10 1 115 8.5E-34 T 23-04-2016 CFF04554_RS00580 e6a68a049451da42878bbf4114aa576f 335 Gene3D G3DSA:3.40.190.10 267 323 8.5E-34 T 23-04-2016 CFF04554_RS00580 e6a68a049451da42878bbf4114aa576f 335 PANTHER PTHR30006 13 331 4.7E-112 T 23-04-2016 CFF04554_RS00580 e6a68a049451da42878bbf4114aa576f 335 Gene3D G3DSA:3.40.190.10 119 266 3.6E-47 T 23-04-2016 CFF04554_RS00580 e6a68a049451da42878bbf4114aa576f 335 SUPERFAMILY SSF53850 19 323 1.05E-79 T 23-04-2016 CFF04554_RS00580 e6a68a049451da42878bbf4114aa576f 335 PANTHER PTHR30006:SF4 13 331 4.7E-112 T 23-04-2016 CFF04554_RS00580 e6a68a049451da42878bbf4114aa576f 335 PIRSF PIRSF002825 11 335 2.7E-81 T 23-04-2016 IPR026045 Ferric binding protein CFF04554_RS05250 e23e1088d4b708c300a5e6391188ab47 215 Pfam PF13525 Outer membrane lipoprotein 34 179 4.7E-18 T 23-04-2016 CFF04554_RS05250 e23e1088d4b708c300a5e6391188ab47 215 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 7 179 2.2E-24 T 23-04-2016 IPR017689 Outer membrane protein assembly factor BamD CFF04554_RS09015 e7e89410b43c09572e6bc0b056bbaa91 90 Gene3D G3DSA:3.40.50.360 1 48 8.3E-6 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS09015 e7e89410b43c09572e6bc0b056bbaa91 90 Pfam PF12682 Flavodoxin 3 68 2.1E-19 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CFF04554_RS09015 e7e89410b43c09572e6bc0b056bbaa91 90 SUPERFAMILY SSF52218 1 48 7.96E-8 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS03165 0dc14512804bfd1678747478306e1eac 386 SUPERFAMILY SSF48452 72 200 4.03E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS03165 0dc14512804bfd1678747478306e1eac 386 SUPERFAMILY SSF48452 315 358 4.03E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS03165 0dc14512804bfd1678747478306e1eac 386 Gene3D G3DSA:1.25.40.10 295 357 9.2E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS03165 0dc14512804bfd1678747478306e1eac 386 Gene3D G3DSA:1.25.40.10 72 228 9.2E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS02390 3f1e4dce2d4508f32ff0fb5fb3a97b92 523 PRINTS PR00313 NodO calcium binding signature 203 211 2.8E-7 T 23-04-2016 CFF04554_RS02390 3f1e4dce2d4508f32ff0fb5fb3a97b92 523 PRINTS PR00313 NodO calcium binding signature 380 389 2.8E-7 T 23-04-2016 CFF04554_RS02390 3f1e4dce2d4508f32ff0fb5fb3a97b92 523 PRINTS PR00313 NodO calcium binding signature 128 139 2.8E-7 T 23-04-2016 CFF04554_RS02390 3f1e4dce2d4508f32ff0fb5fb3a97b92 523 PRINTS PR00313 NodO calcium binding signature 355 363 2.8E-7 T 23-04-2016 CFF04554_RS09050 0d7a93579b5b645feb44a3c0c5908a1a 195 PANTHER PTHR23026:SF101 1 194 2.6E-26 T 23-04-2016 CFF04554_RS09050 0d7a93579b5b645feb44a3c0c5908a1a 195 Gene3D G3DSA:3.40.109.10 1 194 1.7E-50 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CFF04554_RS09050 0d7a93579b5b645feb44a3c0c5908a1a 195 Pfam PF00881 Nitroreductase family 2 174 2.6E-29 T 23-04-2016 IPR029479 Nitroreductase CFF04554_RS09050 0d7a93579b5b645feb44a3c0c5908a1a 195 SUPERFAMILY SSF55469 1 194 1.05E-43 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CFF04554_RS09050 0d7a93579b5b645feb44a3c0c5908a1a 195 PANTHER PTHR23026 1 194 2.6E-26 T 23-04-2016 CFF04554_RS08300 5566074157b337a223a756f2b8ee4d36 216 Pfam PF02254 TrkA-N domain 4 119 2.9E-23 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CFF04554_RS08300 5566074157b337a223a756f2b8ee4d36 216 SUPERFAMILY SSF116726 136 214 5.62E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS08300 5566074157b337a223a756f2b8ee4d36 216 PANTHER PTHR16254 4 158 6.0E-36 T 23-04-2016 CFF04554_RS08300 5566074157b337a223a756f2b8ee4d36 216 Gene3D G3DSA:3.30.70.1450 147 213 8.6E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CFF04554_RS08300 5566074157b337a223a756f2b8ee4d36 216 SUPERFAMILY SSF51735 3 129 9.58E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS08300 5566074157b337a223a756f2b8ee4d36 216 Gene3D G3DSA:3.40.50.720 2 130 1.2E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07170 9cca3947bb981cc809e94f3ffaca4639 343 SUPERFAMILY SSF53756 2 339 8.24E-54 T 23-04-2016 CFF04554_RS07170 9cca3947bb981cc809e94f3ffaca4639 343 PANTHER PTHR12526 91 338 6.6E-42 T 23-04-2016 CFF04554_RS07170 9cca3947bb981cc809e94f3ffaca4639 343 Pfam PF00534 Glycosyl transferases group 1 168 314 9.1E-21 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07170 9cca3947bb981cc809e94f3ffaca4639 343 Pfam PF13439 Glycosyltransferase Family 4 96 152 9.1E-9 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07170 9cca3947bb981cc809e94f3ffaca4639 343 Gene3D G3DSA:3.40.50.2000 134 306 3.1E-23 T 23-04-2016 CFF04554_RS07660 c5757ede0dba5eb4d26583b54c35a061 159 SUPERFAMILY SSF52304 5 154 6.41E-61 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CFF04554_RS07660 c5757ede0dba5eb4d26583b54c35a061 159 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 159 67.59 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CFF04554_RS07660 c5757ede0dba5eb4d26583b54c35a061 159 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 140 1.0E-60 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CFF04554_RS07660 c5757ede0dba5eb4d26583b54c35a061 159 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 4.4E-68 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CFF04554_RS07660 c5757ede0dba5eb4d26583b54c35a061 159 Pfam PF01220 Dehydroquinase class II 6 140 2.6E-58 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CFF04554_RS07660 c5757ede0dba5eb4d26583b54c35a061 159 PANTHER PTHR21272 2 152 4.1E-81 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CFF04554_RS07660 c5757ede0dba5eb4d26583b54c35a061 159 PIRSF PIRSF001399 3 149 1.6E-61 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CFF04554_RS07660 c5757ede0dba5eb4d26583b54c35a061 159 Gene3D G3DSA:3.40.50.9100 5 148 1.5E-62 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CFF04554_RS07660 c5757ede0dba5eb4d26583b54c35a061 159 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CFF04554_RS00675 6e8faf23d218bf3c2a4a7cfe07c971f1 388 SUPERFAMILY SSF56935 74 388 2.56E-12 T 23-04-2016 CFF04554_RS00675 6e8faf23d218bf3c2a4a7cfe07c971f1 388 Pfam PF05538 Campylobacter major outer membrane protein 10 275 3.5E-11 T 23-04-2016 IPR008439 Campylobacter major outer membrane CFF04554_RS08805 f6e62968a4217ba4b7404c55d5d0abd2 434 SUPERFAMILY SSF103473 2 213 3.79E-5 T 23-04-2016 IPR020846 Major facilitator superfamily domain CFF04554_RS08805 f6e62968a4217ba4b7404c55d5d0abd2 434 PANTHER PTHR37821 2 434 7.1E-142 T 23-04-2016 CFF04554_RS08805 f6e62968a4217ba4b7404c55d5d0abd2 434 Pfam PF03553 Na+/H+ antiporter family 144 428 3.3E-60 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CFF04554_RS08805 f6e62968a4217ba4b7404c55d5d0abd2 434 Pfam PF13726 Na+-H+ antiporter family 4 90 5.8E-24 T 23-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal CFF04554_RS05905 a3010647cc02eb47360c25c2de338132 154 SUPERFAMILY SSF46785 15 147 9.64E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS05905 a3010647cc02eb47360c25c2de338132 154 Gene3D G3DSA:1.10.10.10 14 95 3.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS05905 a3010647cc02eb47360c25c2de338132 154 Pfam PF01475 Ferric uptake regulator family 23 143 3.2E-40 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CFF04554_RS05905 a3010647cc02eb47360c25c2de338132 154 PANTHER PTHR33202 1 154 4.5E-40 T 23-04-2016 CFF04554_RS06670 4302e1a604f48a187e998094de095d5a 207 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 200 21.938 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CFF04554_RS06670 4302e1a604f48a187e998094de095d5a 207 SUPERFAMILY SSF52218 1 203 8.8E-37 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS06670 4302e1a604f48a187e998094de095d5a 207 PANTHER PTHR10204:SF4 1 206 6.6E-40 T 23-04-2016 CFF04554_RS06670 4302e1a604f48a187e998094de095d5a 207 Pfam PF02525 Flavodoxin-like fold 1 188 2.7E-36 T 23-04-2016 IPR003680 Flavodoxin-like fold CFF04554_RS06670 4302e1a604f48a187e998094de095d5a 207 PANTHER PTHR10204 1 206 6.6E-40 T 23-04-2016 CFF04554_RS06670 4302e1a604f48a187e998094de095d5a 207 Gene3D G3DSA:3.40.50.360 1 202 2.3E-39 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS01230 0cd8beab4382e1c9c75fb2c95a9f1720 306 Pfam PF01207 Dihydrouridine synthase (Dus) 11 302 7.2E-80 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CFF04554_RS01230 0cd8beab4382e1c9c75fb2c95a9f1720 306 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CFF04554_RS01230 0cd8beab4382e1c9c75fb2c95a9f1720 306 Gene3D G3DSA:3.20.20.70 7 240 9.5E-75 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS01230 0cd8beab4382e1c9c75fb2c95a9f1720 306 PANTHER PTHR11082:SF25 8 305 6.0E-105 T 23-04-2016 CFF04554_RS01230 0cd8beab4382e1c9c75fb2c95a9f1720 306 PANTHER PTHR11082 8 305 6.0E-105 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CFF04554_RS01230 0cd8beab4382e1c9c75fb2c95a9f1720 306 SUPERFAMILY SSF51395 8 305 4.03E-77 T 23-04-2016 CFF04554_RS01230 0cd8beab4382e1c9c75fb2c95a9f1720 306 Gene3D G3DSA:1.10.1200.80 244 306 2.4E-20 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CFF04554_RS01230 0cd8beab4382e1c9c75fb2c95a9f1720 306 PIRSF PIRSF006621 2 306 1.1E-87 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CFF04554_RS04090 b92e3e8fe02ed53ed615c9eee9e7b1b5 207 Gene3D G3DSA:1.20.1260.10 53 205 2.9E-39 T 23-04-2016 IPR012347 Ferritin-related CFF04554_RS04090 b92e3e8fe02ed53ed615c9eee9e7b1b5 207 PANTHER PTHR36933:SF1 5 205 1.1E-18 T 23-04-2016 CFF04554_RS04090 b92e3e8fe02ed53ed615c9eee9e7b1b5 207 Pfam PF03713 Domain of unknown function (DUF305) 56 203 6.8E-33 T 23-04-2016 IPR005183 Domain of unknown function DUF305 CFF04554_RS04090 b92e3e8fe02ed53ed615c9eee9e7b1b5 207 PANTHER PTHR36933 5 205 1.1E-18 T 23-04-2016 CFF04554_RS01220 8210a22877beb25087400b87fa4c9b9e 492 Gene3D G3DSA:3.30.420.40 3 125 6.6E-32 T 23-04-2016 CFF04554_RS01220 8210a22877beb25087400b87fa4c9b9e 492 PIRSF PIRSF001267 1 469 3.2E-73 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CFF04554_RS01220 8210a22877beb25087400b87fa4c9b9e 492 Pfam PF02541 Ppx/GppA phosphatase family 22 299 1.7E-51 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CFF04554_RS01220 8210a22877beb25087400b87fa4c9b9e 492 PANTHER PTHR30005 4 420 3.8E-72 T 23-04-2016 CFF04554_RS01220 8210a22877beb25087400b87fa4c9b9e 492 SUPERFAMILY SSF53067 131 296 1.1E-36 T 23-04-2016 CFF04554_RS01220 8210a22877beb25087400b87fa4c9b9e 492 SUPERFAMILY SSF53067 4 128 2.33E-30 T 23-04-2016 CFF04554_RS01220 8210a22877beb25087400b87fa4c9b9e 492 SUPERFAMILY SSF109604 322 453 7.85E-23 T 23-04-2016 CFF04554_RS01220 8210a22877beb25087400b87fa4c9b9e 492 Gene3D G3DSA:3.30.420.150 131 297 5.8E-32 T 23-04-2016 CFF04554_RS05435 a13e346952e89ff1630a47c5e4705f08 305 PRINTS PR00095 Anthranilate synthase component I signature 151 164 1.2E-5 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CFF04554_RS05435 a13e346952e89ff1630a47c5e4705f08 305 PRINTS PR00095 Anthranilate synthase component I signature 165 178 1.2E-5 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CFF04554_RS05435 a13e346952e89ff1630a47c5e4705f08 305 PRINTS PR00095 Anthranilate synthase component I signature 243 257 1.2E-5 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CFF04554_RS05435 a13e346952e89ff1630a47c5e4705f08 305 Pfam PF00425 chorismate binding enzyme 62 300 1.6E-60 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal CFF04554_RS05435 a13e346952e89ff1630a47c5e4705f08 305 SUPERFAMILY SSF56322 33 302 7.33E-69 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CFF04554_RS05435 a13e346952e89ff1630a47c5e4705f08 305 PANTHER PTHR11236 56 301 3.9E-61 T 23-04-2016 CFF04554_RS05435 a13e346952e89ff1630a47c5e4705f08 305 Gene3D G3DSA:3.60.120.10 59 302 6.4E-68 T 23-04-2016 IPR005801 ADC synthase GO:0009058 CFF04554_RS08955 92ccbb9dec40af6a68ad5b88685bd287 185 Gene3D G3DSA:1.10.132.20 66 185 4.2E-41 T 23-04-2016 IPR023584 Ribosome recycling factor domain CFF04554_RS08955 92ccbb9dec40af6a68ad5b88685bd287 185 Pfam PF01765 Ribosome recycling factor 20 183 3.5E-59 T 23-04-2016 IPR023584 Ribosome recycling factor domain CFF04554_RS08955 92ccbb9dec40af6a68ad5b88685bd287 185 SUPERFAMILY SSF55194 3 184 3.01E-63 T 23-04-2016 IPR023584 Ribosome recycling factor domain CFF04554_RS08955 92ccbb9dec40af6a68ad5b88685bd287 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 24.549 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CFF04554_RS08955 92ccbb9dec40af6a68ad5b88685bd287 185 PANTHER PTHR20982 14 185 2.6E-68 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CFF04554_RS08955 92ccbb9dec40af6a68ad5b88685bd287 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 13 185 2.1E-69 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 CFF04554_RS06615 e6a0b814eb61f1cf9ee83caf766c59a6 381 Gene3D G3DSA:1.20.1090.10 187 381 9.9E-42 T 23-04-2016 CFF04554_RS06615 e6a0b814eb61f1cf9ee83caf766c59a6 381 Gene3D G3DSA:3.40.50.1970 1 184 6.9E-55 T 23-04-2016 CFF04554_RS06615 e6a0b814eb61f1cf9ee83caf766c59a6 381 SUPERFAMILY SSF56796 3 354 3.66E-97 T 23-04-2016 CFF04554_RS06615 e6a0b814eb61f1cf9ee83caf766c59a6 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 357 2.0E-91 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CFF04554_RS06615 e6a0b814eb61f1cf9ee83caf766c59a6 381 PANTHER PTHR11496 1 381 1.2E-91 T 23-04-2016 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 419 3.4E-173 T 23-04-2016 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 4 419 1.4E-184 T 23-04-2016 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 ProSitePatterns PS00450 Aconitase family signature 1. 294 310 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 SUPERFAMILY SSF53732 1 421 2.09E-139 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 ProSitePatterns PS01244 Aconitase family signature 2. 354 367 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 419 7.0E-154 T 23-04-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 Gene3D G3DSA:3.30.499.10 274 419 5.2E-53 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 PANTHER PTHR11670:SF34 1 421 5.1E-164 T 23-04-2016 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 PRINTS PR00415 Aconitase family signature 189 202 7.0E-22 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 PRINTS PR00415 Aconitase family signature 127 142 7.0E-22 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 PRINTS PR00415 Aconitase family signature 298 309 7.0E-22 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 PRINTS PR00415 Aconitase family signature 203 216 7.0E-22 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 PRINTS PR00415 Aconitase family signature 354 367 7.0E-22 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 PRINTS PR00415 Aconitase family signature 113 126 7.0E-22 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 Gene3D G3DSA:3.40.1060.10 160 265 2.2E-28 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 PANTHER PTHR11670 1 421 5.1E-164 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 Pfam PF00330 Aconitase family (aconitate hydratase) 7 413 2.9E-91 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 421 46.802 T 23-04-2016 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS00975 1f526d24b1d7f285db09c5582270e6bd 421 Gene3D G3DSA:3.30.499.10 1 158 1.3E-36 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 Gene3D G3DSA:3.90.25.10 189 241 3.0E-44 T 23-04-2016 CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 Gene3D G3DSA:3.90.25.10 287 339 3.0E-44 T 23-04-2016 CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 339 48.544 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 336 4.0E-132 T 23-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 Gene3D G3DSA:3.40.50.720 1 184 3.4E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 PANTHER PTHR10366 293 339 1.0E-169 T 23-04-2016 CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 PANTHER PTHR10366 3 276 1.0E-169 T 23-04-2016 CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 PANTHER PTHR10366:SF32 293 339 1.0E-169 T 23-04-2016 CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 PANTHER PTHR10366:SF32 3 276 1.0E-169 T 23-04-2016 CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 329 3.6E-124 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS02425 f46f3969e24959609b4735edef1f6a67 343 SUPERFAMILY SSF51735 2 335 2.13E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 Pfam PF00364 Biotin-requiring enzyme 551 613 3.0E-19 T 23-04-2016 IPR000089 Biotin/lipoyl attachment CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 SUPERFAMILY SSF89000 308 461 6.67E-37 T 23-04-2016 CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 Gene3D G3DSA:2.40.50.100 544 613 6.6E-23 T 23-04-2016 CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 PANTHER PTHR18866 1 613 5.7E-56 T 23-04-2016 CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 SUPERFAMILY SSF51569 4 294 1.01E-51 T 23-04-2016 CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 SUPERFAMILY SSF51230 539 613 5.37E-20 T 23-04-2016 IPR011053 Single hybrid motif CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 Pfam PF00682 HMGL-like 7 281 4.1E-14 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 PANTHER PTHR18866:SF109 1 613 5.7E-56 T 23-04-2016 CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 Gene3D G3DSA:3.20.20.70 2 291 2.4E-67 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 Pfam PF02436 Conserved carboxylase domain 307 500 6.2E-39 T 23-04-2016 IPR003379 Carboxylase, conserved domain CFF04554_RS06645 497d21303ba056cfc837b1b2acb92c40 613 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 570 587 - T 23-04-2016 IPR001882 Biotin-binding site CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.1E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.1E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.1E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.1E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 SUPERFAMILY SSF51735 6 252 1.3E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PANTHER PTHR24322 154 182 3.0E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PANTHER PTHR24322 12 138 3.0E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 Gene3D G3DSA:3.40.50.720 2 252 2.0E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.7E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.7E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 2.7E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 6.7E-46 T 23-04-2016 CFF04554_RS05270 1d388b16acccf97a4a99c6d5548e72a4 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CFF04554_RS04770 574236f71445de4ce8dee7d65a189c82 183 SUPERFAMILY SSF50370 19 182 6.4E-40 T 23-04-2016 IPR000772 Ricin B, lectin domain CFF04554_RS04770 574236f71445de4ce8dee7d65a189c82 183 Gene3D G3DSA:2.80.10.50 21 182 1.7E-25 T 23-04-2016 CFF04554_RS04770 574236f71445de4ce8dee7d65a189c82 183 Pfam PF03498 Cytolethal distending toxin A/C domain 33 172 9.1E-19 T 23-04-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 CFF04554_RS03645 599a9ad5964e5dfcdf2b678d7d189d62 419 SUPERFAMILY SSF56317 203 389 1.16E-18 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS03645 599a9ad5964e5dfcdf2b678d7d189d62 419 Gene3D G3DSA:3.60.110.10 225 382 6.1E-11 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS03645 599a9ad5964e5dfcdf2b678d7d189d62 419 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 72 419 1.4E-48 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 CFF04554_RS03645 599a9ad5964e5dfcdf2b678d7d189d62 419 PANTHER PTHR23088 188 387 4.1E-17 T 23-04-2016 CFF04554_RS03645 599a9ad5964e5dfcdf2b678d7d189d62 419 PANTHER PTHR23088:SF29 188 387 4.1E-17 T 23-04-2016 CFF04554_RS03645 599a9ad5964e5dfcdf2b678d7d189d62 419 Pfam PF00795 Carbon-nitrogen hydrolase 225 392 4.9E-9 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS05110 602a245f98a8169c402bec0b80ffdbc1 181 PIRSF PIRSF006305 1 181 4.2E-34 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CFF04554_RS05110 602a245f98a8169c402bec0b80ffdbc1 181 SUPERFAMILY SSF52972 1 180 3.53E-39 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CFF04554_RS05110 602a245f98a8169c402bec0b80ffdbc1 181 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 177 3.6E-38 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CFF04554_RS05110 602a245f98a8169c402bec0b80ffdbc1 181 Pfam PF02545 Maf-like protein 2 178 1.2E-26 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 CFF04554_RS05110 602a245f98a8169c402bec0b80ffdbc1 181 Gene3D G3DSA:3.90.950.10 2 178 1.2E-35 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CFF04554_RS00420 99a502e4a9dc9625381bfceb6ce4c27c 229 SUPERFAMILY SSF53335 22 190 1.39E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS00420 99a502e4a9dc9625381bfceb6ce4c27c 229 Gene3D G3DSA:3.40.50.150 8 187 1.2E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08855 2d625e317c4325ed85a913ff93f966c2 664 SUPERFAMILY SSF56935 413 662 1.67E-94 T 23-04-2016 CFF04554_RS08855 2d625e317c4325ed85a913ff93f966c2 664 SUPERFAMILY SSF56935 24 383 1.67E-94 T 23-04-2016 CFF04554_RS08855 2d625e317c4325ed85a913ff93f966c2 664 Pfam PF07715 TonB-dependent Receptor Plug Domain 38 145 2.8E-17 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS08855 2d625e317c4325ed85a913ff93f966c2 664 PANTHER PTHR32552 19 664 7.3E-97 T 23-04-2016 CFF04554_RS08855 2d625e317c4325ed85a913ff93f966c2 664 Gene3D G3DSA:2.170.130.10 36 146 1.7E-28 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CFF04554_RS08855 2d625e317c4325ed85a913ff93f966c2 664 PANTHER PTHR32552:SF0 19 664 7.3E-97 T 23-04-2016 CFF04554_RS08855 2d625e317c4325ed85a913ff93f966c2 664 Gene3D G3DSA:2.40.170.20 147 662 3.4E-78 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS08855 2d625e317c4325ed85a913ff93f966c2 664 Pfam PF00593 TonB dependent receptor 432 662 2.1E-19 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CFF04554_RS08065 ee5d70348520a4d167a981a5e9228a70 253 PANTHER PTHR11624 5 253 5.8E-78 T 23-04-2016 IPR033247 Transketolase family CFF04554_RS08065 ee5d70348520a4d167a981a5e9228a70 253 Gene3D G3DSA:3.40.50.970 4 251 2.9E-77 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS08065 ee5d70348520a4d167a981a5e9228a70 253 SUPERFAMILY SSF52518 4 247 1.46E-70 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS08065 ee5d70348520a4d167a981a5e9228a70 253 PANTHER PTHR11624:SF86 5 253 5.8E-78 T 23-04-2016 CFF04554_RS08065 ee5d70348520a4d167a981a5e9228a70 253 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 236 3.8E-35 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 PIRSF PIRSF001430 1 257 1.7E-65 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 257 29.018 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 PANTHER PTHR11142:SF0 1 257 9.1E-48 T 23-04-2016 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 SUPERFAMILY SSF55120 1 257 6.04E-55 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 Pfam PF01416 tRNA pseudouridine synthase 141 257 4.8E-14 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 Pfam PF01416 tRNA pseudouridine synthase 8 104 3.4E-5 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 PANTHER PTHR11142 1 257 9.1E-48 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 Gene3D G3DSA:3.30.70.580 2 105 1.6E-22 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 252 1.5E-49 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03750 36a82cd209a84a0502f2703993aea26d 257 Gene3D G3DSA:3.30.70.660 107 255 3.3E-25 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS09420 905a6766aabec7dd7c36abbb5565e005 82 SUPERFAMILY SSF69118 12 75 1.55E-6 T 23-04-2016 IPR029032 AhpD-like CFF04554_RS06205 8a47ed0ed21937ae8e50c707ccb6aba8 347 Pfam PF01497 Periplasmic binding protein 93 274 2.0E-22 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CFF04554_RS06205 8a47ed0ed21937ae8e50c707ccb6aba8 347 PANTHER PTHR30535:SF5 18 332 2.2E-36 T 23-04-2016 CFF04554_RS06205 8a47ed0ed21937ae8e50c707ccb6aba8 347 Gene3D G3DSA:3.40.50.1980 18 153 5.6E-16 T 23-04-2016 CFF04554_RS06205 8a47ed0ed21937ae8e50c707ccb6aba8 347 Gene3D G3DSA:3.40.50.1980 157 301 2.4E-21 T 23-04-2016 CFF04554_RS06205 8a47ed0ed21937ae8e50c707ccb6aba8 347 PANTHER PTHR30535 18 332 2.2E-36 T 23-04-2016 CFF04554_RS06205 8a47ed0ed21937ae8e50c707ccb6aba8 347 SUPERFAMILY SSF53807 24 332 7.85E-44 T 23-04-2016 CFF04554_RS03710 cbc39f59ee78cfe49fa60bde5f204eec 248 PANTHER PTHR13779 21 159 2.3E-53 T 23-04-2016 CFF04554_RS03710 cbc39f59ee78cfe49fa60bde5f204eec 248 PANTHER PTHR13779:SF28 21 159 2.3E-53 T 23-04-2016 CFF04554_RS03710 cbc39f59ee78cfe49fa60bde5f204eec 248 PANTHER PTHR13779:SF28 179 238 2.3E-53 T 23-04-2016 CFF04554_RS03710 cbc39f59ee78cfe49fa60bde5f204eec 248 Pfam PF05673 Protein of unknown function (DUF815) 14 241 5.3E-74 T 23-04-2016 IPR008533 Domain of unknown function DUF815 CFF04554_RS03710 cbc39f59ee78cfe49fa60bde5f204eec 248 SUPERFAMILY SSF52540 27 159 5.09E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03710 cbc39f59ee78cfe49fa60bde5f204eec 248 PANTHER PTHR13779 179 238 2.3E-53 T 23-04-2016 CFF04554_RS03710 cbc39f59ee78cfe49fa60bde5f204eec 248 Gene3D G3DSA:3.40.50.300 40 188 2.2E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08185 7c3db094b02be6be0ae745c5e6c1d2ac 217 Gene3D G3DSA:3.40.50.150 60 204 1.3E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08185 7c3db094b02be6be0ae745c5e6c1d2ac 217 PANTHER PTHR10509 64 187 1.5E-18 T 23-04-2016 CFF04554_RS08185 7c3db094b02be6be0ae745c5e6c1d2ac 217 SUPERFAMILY SSF53335 65 199 1.82E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08185 7c3db094b02be6be0ae745c5e6c1d2ac 217 PANTHER PTHR10509:SF25 64 187 1.5E-18 T 23-04-2016 CFF04554_RS08185 7c3db094b02be6be0ae745c5e6c1d2ac 217 Pfam PF13578 Methyltransferase domain 83 187 2.1E-14 T 23-04-2016 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 1 618 39.462 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 268 282 - T 23-04-2016 IPR020595 MnmG-related, conserved site CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 SMART SM01228 540 611 1.3E-31 T 23-04-2016 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 Pfam PF01134 Glucose inhibited division protein A 4 393 8.3E-162 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 PANTHER PTHR11806 2 621 0.0 T 23-04-2016 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 PANTHER PTHR11806:SF0 2 621 0.0 T 23-04-2016 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 363 386 - T 23-04-2016 IPR020595 MnmG-related, conserved site CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3 614 3.5E-259 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 Pfam PF13932 GidA associated domain 396 609 7.6E-59 T 23-04-2016 IPR026904 GidA associated domain 3 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 Gene3D G3DSA:3.50.50.60 1 169 2.1E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 SUPERFAMILY SSF51905 1 62 3.23E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 SUPERFAMILY SSF51905 93 256 3.23E-41 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.5E-6 T 23-04-2016 CFF04554_RS07365 aa15859958110f097abf37c05ec4225b 621 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 2.5E-6 T 23-04-2016 CFF04554_RS08685 1137409e2fe28a86302744ad57c2752c 509 Pfam PF00884 Sulfatase 219 489 4.3E-42 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CFF04554_RS08685 1137409e2fe28a86302744ad57c2752c 509 PANTHER PTHR30443 3 506 1.1E-160 T 23-04-2016 CFF04554_RS08685 1137409e2fe28a86302744ad57c2752c 509 SUPERFAMILY SSF53649 252 462 1.55E-19 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CFF04554_RS08685 1137409e2fe28a86302744ad57c2752c 509 PANTHER PTHR30443:SF0 3 506 1.1E-160 T 23-04-2016 CFF04554_RS08685 1137409e2fe28a86302744ad57c2752c 509 Gene3D G3DSA:3.40.720.10 323 462 8.3E-13 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CFF04554_RS08685 1137409e2fe28a86302744ad57c2752c 509 Pfam PF08019 Domain of unknown function (DUF1705) 47 194 3.7E-40 T 23-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 CFF04554_RS01480 74f445480a0aeda61ed19acb454b259a 259 Pfam PF05818 Enterobacterial TraT complement resistance protein 26 259 3.8E-72 T 23-04-2016 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 CFF04554_RS00140 0a16c920c9708e69ce80a0d963a14646 340 PIRSF PIRSF000355 1 340 4.8E-113 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CFF04554_RS00140 0a16c920c9708e69ce80a0d963a14646 340 SUPERFAMILY SSF47240 16 336 5.13E-87 T 23-04-2016 IPR009078 Ferritin-like superfamily CFF04554_RS00140 0a16c920c9708e69ce80a0d963a14646 340 PANTHER PTHR23409 35 334 2.2E-64 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CFF04554_RS00140 0a16c920c9708e69ce80a0d963a14646 340 Pfam PF00268 Ribonucleotide reductase, small chain 30 305 1.9E-65 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CFF04554_RS00140 0a16c920c9708e69ce80a0d963a14646 340 Gene3D G3DSA:1.10.620.20 16 312 1.2E-92 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 CFF04554_RS00140 0a16c920c9708e69ce80a0d963a14646 340 PANTHER PTHR23409:SF18 35 334 2.2E-64 T 23-04-2016 CFF04554_RS01015 690124a86e1adc53a7bfd3105f045318 88 PIRSF PIRSF004669 1 88 5.3E-30 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CFF04554_RS01015 690124a86e1adc53a7bfd3105f045318 88 PANTHER PTHR34040 1 88 2.9E-33 T 23-04-2016 CFF04554_RS01015 690124a86e1adc53a7bfd3105f045318 88 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 3 87 3.5E-31 T 23-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CFF04554_RS01015 690124a86e1adc53a7bfd3105f045318 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 38 53 2.7E-21 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CFF04554_RS01015 690124a86e1adc53a7bfd3105f045318 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 53 75 2.7E-21 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CFF04554_RS01015 690124a86e1adc53a7bfd3105f045318 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 17 38 2.7E-21 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CFF04554_RS01015 690124a86e1adc53a7bfd3105f045318 88 PANTHER PTHR34040:SF2 1 88 2.9E-33 T 23-04-2016 CFF04554_RS01015 690124a86e1adc53a7bfd3105f045318 88 Pfam PF01313 Bacterial export proteins, family 3 5 76 8.4E-29 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 SUPERFAMILY SSF81342 11 221 1.33E-37 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 11 224 5.9E-82 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 Gene3D G3DSA:1.20.950.20 11 220 7.7E-39 T 23-04-2016 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 PANTHER PTHR30485:SF0 2 225 9.8E-42 T 23-04-2016 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 Pfam PF01292 Prokaryotic cytochrome b561 13 218 9.0E-35 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 PANTHER PTHR30485 2 225 9.8E-42 T 23-04-2016 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 130 149 6.1E-27 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 210 223 6.1E-27 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 54 78 6.1E-27 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 15 38 6.1E-27 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CFF04554_RS04690 3f22b8d3a2dbd910d584d9e1d0d11a71 225 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 179 201 6.1E-27 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CFF04554_RS08310 2ec613af87ab542228c783f09f38257c 445 PANTHER PTHR36106 4 445 5.0E-225 T 23-04-2016 CFF04554_RS08310 2ec613af87ab542228c783f09f38257c 445 PANTHER PTHR36106:SF2 4 445 5.0E-225 T 23-04-2016 CFF04554_RS08310 2ec613af87ab542228c783f09f38257c 445 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 8 445 7.5E-200 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CFF04554_RS08310 2ec613af87ab542228c783f09f38257c 445 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 8 371 5.1E-145 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CFF04554_RS08310 2ec613af87ab542228c783f09f38257c 445 PIRSF PIRSF004539 3 445 1.4E-175 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CFF04554_RS04575 fcdb825eb356f959bf626a8507a7a3d6 205 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 173 1.1E-11 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CFF04554_RS04575 fcdb825eb356f959bf626a8507a7a3d6 205 PANTHER PTHR18901 4 185 1.0E-28 T 23-04-2016 CFF04554_RS04575 fcdb825eb356f959bf626a8507a7a3d6 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 180 1.3E-33 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS04575 fcdb825eb356f959bf626a8507a7a3d6 205 Gene3D G3DSA:3.40.50.1000 85 184 1.1E-28 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS04575 fcdb825eb356f959bf626a8507a7a3d6 205 Gene3D G3DSA:3.40.50.1000 3 22 1.1E-28 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS04575 fcdb825eb356f959bf626a8507a7a3d6 205 SUPERFAMILY SSF56784 1 185 1.6E-42 T 23-04-2016 IPR023214 HAD-like domain CFF04554_RS00865 91bb836868b8d3711b1aaaaf84294fda 217 Pfam PF02361 Cobalt transport protein 9 184 3.8E-14 T 23-04-2016 IPR003339 ABC/ECF transporter, transmembrane component CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 Gene3D G3DSA:1.10.8.60 331 440 4.6E-35 T 23-04-2016 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 Gene3D G3DSA:3.40.50.300 241 327 1.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 Gene3D G3DSA:3.40.50.300 3 109 1.5E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 Pfam PF07724 AAA domain (Cdc48 subfamily) 190 325 1.1E-37 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 Pfam PF07724 AAA domain (Cdc48 subfamily) 51 115 2.4E-6 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 332 402 2.6E-6 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 Gene3D G3DSA:1.10.8.10 209 239 6.0E-20 T 23-04-2016 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 Gene3D G3DSA:1.10.8.10 110 175 6.0E-20 T 23-04-2016 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 PANTHER PTHR11262:SF3 2 104 5.9E-178 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 PANTHER PTHR11262:SF3 214 440 5.9E-178 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 440 1.3E-190 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 SMART SM00382 48 329 8.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 SMART SM01086 332 428 7.9E-21 T 23-04-2016 IPR019489 Clp ATPase, C-terminal CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 PANTHER PTHR11262 2 104 5.9E-178 T 23-04-2016 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 PANTHER PTHR11262 214 440 5.9E-178 T 23-04-2016 CFF04554_RS04965 218d014b585947f35906cddb4cd3d1ce 440 SUPERFAMILY SSF52540 2 435 5.08E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07140 c987bf59664db57d0af18973bc592d93 372 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 141 304 1.7E-9 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CFF04554_RS07140 c987bf59664db57d0af18973bc592d93 372 Gene3D G3DSA:3.40.50.2000 191 305 3.6E-12 T 23-04-2016 CFF04554_RS07140 c987bf59664db57d0af18973bc592d93 372 SUPERFAMILY SSF53756 25 305 5.02E-21 T 23-04-2016 CFF04554_RS02220 f5c3ea022191f7f6189b09f3a49d65d6 182 SUPERFAMILY SSF46626 94 169 2.59E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS02220 f5c3ea022191f7f6189b09f3a49d65d6 182 Gene3D G3DSA:1.10.760.10 96 169 1.8E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07035 0f1a5f38fd0e326eb5d32b9a8f503749 192 SUPERFAMILY SSF51161 1 190 8.59E-43 T 23-04-2016 IPR011004 Trimeric LpxA-like CFF04554_RS07035 0f1a5f38fd0e326eb5d32b9a8f503749 192 PANTHER PTHR23416 74 190 3.7E-19 T 23-04-2016 CFF04554_RS07035 0f1a5f38fd0e326eb5d32b9a8f503749 192 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 188 3.0E-54 T 23-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like CFF04554_RS07035 0f1a5f38fd0e326eb5d32b9a8f503749 192 Gene3D G3DSA:3.40.50.20 1 72 2.3E-24 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS07035 0f1a5f38fd0e326eb5d32b9a8f503749 192 Gene3D G3DSA:2.160.10.10 75 191 2.6E-27 T 23-04-2016 CFF04554_RS07035 0f1a5f38fd0e326eb5d32b9a8f503749 192 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 86 119 0.001 T 23-04-2016 IPR001451 Hexapeptide repeat CFF04554_RS04250 90f6fa356cb802ebe3b200426930408c 137 Pfam PF01618 MotA/TolQ/ExbB proton channel family 49 136 3.2E-27 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CFF04554_RS04250 90f6fa356cb802ebe3b200426930408c 137 PANTHER PTHR30625:SF6 9 136 1.0E-26 T 23-04-2016 CFF04554_RS04250 90f6fa356cb802ebe3b200426930408c 137 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 2 136 1.0E-58 T 23-04-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 CFF04554_RS04250 90f6fa356cb802ebe3b200426930408c 137 PANTHER PTHR30625 9 136 1.0E-26 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 Pfam PF00361 Proton-conducting membrane transporter 134 422 1.9E-73 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PANTHER PTHR22773:SF50 1 552 2.3E-181 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PANTHER PTHR22773 1 552 2.3E-181 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 13 32 1.5E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 414 436 1.5E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.5E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 475 496 1.5E-8 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 1.2E-55 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 83 108 1.2E-55 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 1.2E-55 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 1.2E-55 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 158 179 1.2E-55 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 1.2E-55 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 111 131 1.2E-55 T 23-04-2016 CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 122 8.8E-20 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CFF04554_RS00835 5f1317a910f8c0ac85b913f8938212e5 603 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 598 4.1E-170 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 CFF04554_RS05295 882432c2d7f8205a42fd85d336150338 308 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 2 24 1.4E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS05295 882432c2d7f8205a42fd85d336150338 308 SUPERFAMILY SSF54523 5 61 1.88E-5 T 23-04-2016 CFF04554_RS05295 882432c2d7f8205a42fd85d336150338 308 Pfam PF13633 Prokaryotic N-terminal methylation site 3 26 7.6E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS03535 207d9703d21187b0b691f8ab8cd0b066 95 Pfam PF02049 Flagellar hook-basal body complex protein FliE 11 94 2.8E-26 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CFF04554_RS03535 207d9703d21187b0b691f8ab8cd0b066 95 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 95 16.986 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CFF04554_RS03535 207d9703d21187b0b691f8ab8cd0b066 95 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 25 41 1.5E-11 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CFF04554_RS03535 207d9703d21187b0b691f8ab8cd0b066 95 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 80 93 1.5E-11 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CFF04554_RS03535 207d9703d21187b0b691f8ab8cd0b066 95 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 59 75 1.5E-11 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CFF04554_RS03535 207d9703d21187b0b691f8ab8cd0b066 95 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 9 94 1.8E-27 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CFF04554_RS03535 207d9703d21187b0b691f8ab8cd0b066 95 PANTHER PTHR34653 3 95 5.0E-16 T 23-04-2016 CFF04554_RS00910 9c78d6ecb958447c3273c64304e5ec4f 279 SUPERFAMILY SSF161098 27 273 8.69E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00910 9c78d6ecb958447c3273c64304e5ec4f 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 277 1.7E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00910 9c78d6ecb958447c3273c64304e5ec4f 279 PANTHER PTHR30425 2 279 3.3E-92 T 23-04-2016 CFF04554_RS00910 9c78d6ecb958447c3273c64304e5ec4f 279 PANTHER PTHR30425:SF0 2 279 3.3E-92 T 23-04-2016 CFF04554_RS00910 9c78d6ecb958447c3273c64304e5ec4f 279 Gene3D G3DSA:1.10.3720.10 64 279 1.8E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS00910 9c78d6ecb958447c3273c64304e5ec4f 279 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 20 278 2.8E-77 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 165 194 2.8E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 239 266 2.8E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 268 297 2.8E-19 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 Gene3D G3DSA:1.10.287.950 162 353 1.8E-46 T 23-04-2016 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 PANTHER PTHR32089 1 52 1.2E-44 T 23-04-2016 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 PANTHER PTHR32089 164 350 1.2E-44 T 23-04-2016 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 PANTHER PTHR32089 106 139 1.2E-44 T 23-04-2016 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 SUPERFAMILY SSF58104 161 358 3.92E-51 T 23-04-2016 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 SUPERFAMILY SSF58104 41 72 3.92E-51 T 23-04-2016 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 199 292 1.2E-30 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS09305 34d38b722d09c81238d0f5d66ed87f12 361 SMART SM00283 158 357 4.7E-26 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 5.8E-22 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 50 72 5.8E-22 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 165 180 5.8E-22 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 5.8E-22 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 PANTHER PTHR11766:SF1 4 402 4.2E-183 T 23-04-2016 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 56 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 SUPERFAMILY SSF52374 25 317 1.87E-85 T 23-04-2016 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 Gene3D G3DSA:3.40.50.620 12 232 4.8E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 401 42.857 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 Gene3D G3DSA:3.10.290.10 334 400 7.0E-24 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 PANTHER PTHR11766 4 402 4.2E-183 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 SUPERFAMILY SSF55174 312 401 1.18E-16 T 23-04-2016 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 Pfam PF00579 tRNA synthetases class I (W and Y) 36 321 4.3E-69 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 401 8.9E-113 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CFF04554_RS06245 c021b1a48a0bb9d0d92185acd9517a0d 402 Gene3D G3DSA:1.10.240.10 233 333 5.5E-33 T 23-04-2016 CFF04554_RS07855 3eff89da413e239f6445a798740edd6c 225 SUPERFAMILY SSF89155 3 190 3.01E-21 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone CFF04554_RS07855 3eff89da413e239f6445a798740edd6c 225 Gene3D G3DSA:1.10.3480.10 63 186 7.3E-9 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone CFF04554_RS06310 657770207d9ac08d3b398b6a2f7921e4 110 Gene3D G3DSA:1.10.10.10 5 107 3.2E-40 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS06310 657770207d9ac08d3b398b6a2f7921e4 110 Pfam PF01638 HxlR-like helix-turn-helix 16 107 4.4E-30 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type CFF04554_RS06310 657770207d9ac08d3b398b6a2f7921e4 110 SUPERFAMILY SSF46785 1 106 1.25E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS06310 657770207d9ac08d3b398b6a2f7921e4 110 PANTHER PTHR33204:SF5 5 108 1.7E-40 T 23-04-2016 CFF04554_RS06310 657770207d9ac08d3b398b6a2f7921e4 110 PANTHER PTHR33204 5 108 1.7E-40 T 23-04-2016 CFF04554_RS00715 4b8ec6cc48ddda8a59f71e32b2932b91 87 SUPERFAMILY SSF117991 5 83 3.4E-20 T 23-04-2016 IPR027471 YbeD-like domain CFF04554_RS00715 4b8ec6cc48ddda8a59f71e32b2932b91 87 Gene3D G3DSA:3.30.70.1460 9 81 2.4E-6 T 23-04-2016 IPR027471 YbeD-like domain CFF04554_RS00715 4b8ec6cc48ddda8a59f71e32b2932b91 87 Pfam PF04359 Protein of unknown function (DUF493) 11 83 1.4E-8 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 CFF04554_RS00715 4b8ec6cc48ddda8a59f71e32b2932b91 87 ProDom PD061650 JHP0447 HP0495 CJ0253 15 87 1.0E-10 T 23-04-2016 CFF04554_RS01745 3fa0e46f12eb351503e937bff984d9a4 242 PANTHER PTHR30269 1 242 4.2E-36 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CFF04554_RS01745 3fa0e46f12eb351503e937bff984d9a4 242 Pfam PF01925 Sulfite exporter TauE/SafE 6 232 2.4E-42 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 Gene3D G3DSA:3.40.50.300 97 373 2.1E-119 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 Gene3D G3DSA:2.40.30.20 4 95 1.4E-36 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 PIRSF PIRSF039088 3 505 2.1E-261 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 503 4.3E-263 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 PANTHER PTHR15184:SF3 1 487 0.0 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 SUPERFAMILY SSF47917 374 502 6.02E-50 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 SUPERFAMILY SSF52540 98 372 5.8E-101 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 SUPERFAMILY SSF50615 12 95 1.41E-28 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 Gene3D G3DSA:1.20.150.20 374 502 2.3E-55 T 23-04-2016 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 373 498 6.5E-52 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 366 1.5E-77 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 PANTHER PTHR15184 1 487 0.0 T 23-04-2016 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 1.2E-16 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS07770 ef7e3948c6495c314ec956f1b093f259 505 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 503 52.827 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CFF04554_RS09140 b49b2352d102c39f93d6e6982dd4c9d0 135 Pfam PF00308 Bacterial dnaA protein 101 135 4.7E-8 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA CFF04554_RS09140 b49b2352d102c39f93d6e6982dd4c9d0 135 Gene3D G3DSA:3.40.50.300 93 134 1.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS09140 b49b2352d102c39f93d6e6982dd4c9d0 135 PANTHER PTHR30050:SF2 4 131 4.3E-22 T 23-04-2016 CFF04554_RS09140 b49b2352d102c39f93d6e6982dd4c9d0 135 PANTHER PTHR30050 4 131 4.3E-22 T 23-04-2016 CFF04554_RS09140 b49b2352d102c39f93d6e6982dd4c9d0 135 Pfam PF11638 DnaA N-terminal domain 5 64 3.6E-8 T 23-04-2016 IPR024633 DnaA N-terminal domain CFF04554_RS01860 7eaf9a05308e20553966887a260c09af 141 Pfam PF02050 Flagellar FliJ protein 18 134 4.4E-15 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CFF04554_RS08150 a0f4971b71405bef7352d29a1c9ef8f4 368 Gene3D G3DSA:3.40.50.2000 210 311 4.9E-11 T 23-04-2016 CFF04554_RS08150 a0f4971b71405bef7352d29a1c9ef8f4 368 PANTHER PTHR12526 149 343 6.9E-30 T 23-04-2016 CFF04554_RS08150 a0f4971b71405bef7352d29a1c9ef8f4 368 PANTHER PTHR12526 7 125 6.9E-30 T 23-04-2016 CFF04554_RS08150 a0f4971b71405bef7352d29a1c9ef8f4 368 SUPERFAMILY SSF53756 8 367 1.36E-42 T 23-04-2016 CFF04554_RS08150 a0f4971b71405bef7352d29a1c9ef8f4 368 Pfam PF00534 Glycosyl transferases group 1 203 344 1.1E-22 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS06810 d7dfa5a57e38e95877c75a71eec9898d 131 PANTHER PTHR11078 4 129 1.3E-34 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CFF04554_RS06810 d7dfa5a57e38e95877c75a71eec9898d 131 Pfam PF01029 NusB family 6 129 2.0E-29 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CFF04554_RS06810 d7dfa5a57e38e95877c75a71eec9898d 131 Gene3D G3DSA:1.10.940.10 1 129 1.2E-37 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CFF04554_RS06810 d7dfa5a57e38e95877c75a71eec9898d 131 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 129 4.0E-36 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CFF04554_RS06810 d7dfa5a57e38e95877c75a71eec9898d 131 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 2 131 19.035 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 CFF04554_RS06810 d7dfa5a57e38e95877c75a71eec9898d 131 SUPERFAMILY SSF48013 3 129 2.75E-32 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CFF04554_RS01205 da2addf4385a95bb2d2f3ad5e42a9fcd 223 Pfam PF00072 Response regulator receiver domain 3 112 2.4E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS01205 da2addf4385a95bb2d2f3ad5e42a9fcd 223 PANTHER PTHR26402 1 217 1.6E-58 T 23-04-2016 CFF04554_RS01205 da2addf4385a95bb2d2f3ad5e42a9fcd 223 Gene3D G3DSA:1.10.10.10 121 217 1.5E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS01205 da2addf4385a95bb2d2f3ad5e42a9fcd 223 Gene3D G3DSA:3.40.50.2300 1 117 3.9E-32 T 23-04-2016 CFF04554_RS01205 da2addf4385a95bb2d2f3ad5e42a9fcd 223 PANTHER PTHR26402:SF578 1 217 1.6E-58 T 23-04-2016 CFF04554_RS01205 da2addf4385a95bb2d2f3ad5e42a9fcd 223 SMART SM00448 1 112 1.8E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS01205 da2addf4385a95bb2d2f3ad5e42a9fcd 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 217 2.3E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS01205 da2addf4385a95bb2d2f3ad5e42a9fcd 223 SUPERFAMILY SSF52172 1 167 2.26E-32 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS01205 da2addf4385a95bb2d2f3ad5e42a9fcd 223 SMART SM00862 142 217 1.9E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CFF04554_RS04100 a815c9d3f2fa56443ae87617b2168b8d 153 SUPERFAMILY SSF55021 75 151 7.32E-17 T 23-04-2016 CFF04554_RS04100 a815c9d3f2fa56443ae87617b2168b8d 153 Pfam PF01842 ACT domain 4 68 7.6E-14 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CFF04554_RS04100 a815c9d3f2fa56443ae87617b2168b8d 153 SUPERFAMILY SSF55021 1 74 1.04E-19 T 23-04-2016 CFF04554_RS04100 a815c9d3f2fa56443ae87617b2168b8d 153 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 151 8.0E-41 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS04100 a815c9d3f2fa56443ae87617b2168b8d 153 PANTHER PTHR30239 1 151 1.9E-41 T 23-04-2016 CFF04554_RS04100 a815c9d3f2fa56443ae87617b2168b8d 153 Gene3D G3DSA:3.30.70.1150 81 152 7.6E-14 T 23-04-2016 CFF04554_RS04100 a815c9d3f2fa56443ae87617b2168b8d 153 Pfam PF10369 Small subunit of acetolactate synthase 82 152 1.1E-13 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CFF04554_RS04100 a815c9d3f2fa56443ae87617b2168b8d 153 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 1.0E-31 T 23-04-2016 CFF04554_RS04100 a815c9d3f2fa56443ae87617b2168b8d 153 Gene3D G3DSA:3.30.70.260 1 75 2.4E-30 T 23-04-2016 CFF04554_RS02680 5c6d14dc44c34de25d007486d6a52f71 399 Gene3D G3DSA:3.30.2010.10 191 283 8.4E-19 T 23-04-2016 CFF04554_RS02680 5c6d14dc44c34de25d007486d6a52f71 399 PANTHER PTHR10120 1 399 2.0E-86 T 23-04-2016 CFF04554_RS02680 5c6d14dc44c34de25d007486d6a52f71 399 Pfam PF01435 Peptidase family M48 198 398 1.8E-38 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CFF04554_RS02680 5c6d14dc44c34de25d007486d6a52f71 399 PANTHER PTHR10120:SF24 1 399 2.0E-86 T 23-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 CFF04554_RS02680 5c6d14dc44c34de25d007486d6a52f71 399 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 37 194 8.0E-32 T 23-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 SUPERFAMILY SSF53067 10 150 8.19E-39 T 23-04-2016 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 SMART SM00268 16 342 0.0047 T 23-04-2016 IPR004000 Actin family CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 SUPERFAMILY SSF53067 153 334 1.05E-46 T 23-04-2016 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 Gene3D G3DSA:3.30.420.40 11 162 1.0E-45 T 23-04-2016 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 PANTHER PTHR19375:SF117 10 329 6.6E-153 T 23-04-2016 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 PANTHER PTHR19375 10 329 6.6E-153 T 23-04-2016 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 8.1E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 8.1E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 8.1E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 8.1E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 8.1E-62 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 338 6.4E-155 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 Gene3D G3DSA:3.90.640.10 190 262 3.4E-26 T 23-04-2016 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 Gene3D G3DSA:3.30.420.40 163 189 2.1E-30 T 23-04-2016 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 Gene3D G3DSA:3.30.420.40 266 320 2.1E-30 T 23-04-2016 CFF04554_RS01585 74abc4e7e49030f5069a1832f0903e7e 345 Pfam PF06723 MreB/Mbl protein 12 338 3.6E-143 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CFF04554_RS02785 41130db5287ea2da94e746b4f077223d 93 Pfam PF01883 Domain of unknown function DUF59 2 65 4.2E-14 T 23-04-2016 IPR002744 Domain of unknown function DUF59 CFF04554_RS02785 41130db5287ea2da94e746b4f077223d 93 PANTHER PTHR13696:SF62 1 87 1.5E-12 T 23-04-2016 CFF04554_RS02785 41130db5287ea2da94e746b4f077223d 93 SUPERFAMILY SSF117916 2 93 3.92E-25 T 23-04-2016 CFF04554_RS02785 41130db5287ea2da94e746b4f077223d 93 PANTHER PTHR13696 1 87 1.5E-12 T 23-04-2016 CFF04554_RS09105 2af59f4bd6b097c53f1a10c14366aaf4 99 Pfam PF04993 TfoX N-terminal domain 12 69 1.7E-6 T 23-04-2016 IPR007076 TfoX, N-terminal CFF04554_RS09105 2af59f4bd6b097c53f1a10c14366aaf4 99 Gene3D G3DSA:3.30.1460.30 7 58 2.3E-5 T 23-04-2016 IPR007076 TfoX, N-terminal CFF04554_RS09105 2af59f4bd6b097c53f1a10c14366aaf4 99 SUPERFAMILY SSF159894 6 94 1.86E-12 T 23-04-2016 CFF04554_RS02245 d4de032b17a33f2eedfd816829e70fa8 151 SUPERFAMILY SSF160387 45 150 1.23E-24 T 23-04-2016 CFF04554_RS02245 d4de032b17a33f2eedfd816829e70fa8 151 Pfam PF05573 NosL 27 146 1.2E-18 T 23-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL CFF04554_RS02245 d4de032b17a33f2eedfd816829e70fa8 151 PANTHER PTHR41247 32 151 5.5E-12 T 23-04-2016 CFF04554_RS00605 7dab17ef25d9380f3bb15d58f654c398 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 8.5E-13 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CFF04554_RS00605 7dab17ef25d9380f3bb15d58f654c398 213 SUPERFAMILY SSF46689 11 81 1.64E-16 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS00605 7dab17ef25d9380f3bb15d58f654c398 213 Gene3D G3DSA:1.10.10.60 11 64 1.3E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS00605 7dab17ef25d9380f3bb15d58f654c398 213 PANTHER PTHR30055:SF76 4 210 1.2E-22 T 23-04-2016 CFF04554_RS00605 7dab17ef25d9380f3bb15d58f654c398 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.1E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CFF04554_RS00605 7dab17ef25d9380f3bb15d58f654c398 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.1E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CFF04554_RS00605 7dab17ef25d9380f3bb15d58f654c398 213 Gene3D G3DSA:1.10.357.10 65 210 1.7E-20 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CFF04554_RS00605 7dab17ef25d9380f3bb15d58f654c398 213 PANTHER PTHR30055 4 210 1.2E-22 T 23-04-2016 CFF04554_RS00020 9d1a79761216734f4984eb7e364d1780 460 PANTHER PTHR33121:SF13 299 454 3.5E-14 T 23-04-2016 CFF04554_RS00020 9d1a79761216734f4984eb7e364d1780 460 SUPERFAMILY SSF141868 227 454 7.19E-37 T 23-04-2016 IPR001633 EAL domain CFF04554_RS00020 9d1a79761216734f4984eb7e364d1780 460 PANTHER PTHR33121 299 454 3.5E-14 T 23-04-2016 CFF04554_RS00020 9d1a79761216734f4984eb7e364d1780 460 SMART SM00052 221 459 1.1E-8 T 23-04-2016 IPR001633 EAL domain CFF04554_RS00020 9d1a79761216734f4984eb7e364d1780 460 Pfam PF00563 EAL domain 228 454 1.4E-44 T 23-04-2016 IPR001633 EAL domain CFF04554_RS00020 9d1a79761216734f4984eb7e364d1780 460 Gene3D G3DSA:3.20.20.450 226 454 1.5E-29 T 23-04-2016 IPR001633 EAL domain CFF04554_RS00235 e59e4acf39659afd4c11a10a98638990 131 SUPERFAMILY SSF56047 1 131 1.7E-41 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00235 e59e4acf39659afd4c11a10a98638990 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00235 e59e4acf39659afd4c11a10a98638990 131 Pfam PF00410 Ribosomal protein S8 4 131 3.9E-45 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00235 e59e4acf39659afd4c11a10a98638990 131 Gene3D G3DSA:3.30.1370.30 1 70 5.8E-21 T 23-04-2016 CFF04554_RS00235 e59e4acf39659afd4c11a10a98638990 131 PANTHER PTHR11758 1 131 5.6E-42 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00235 e59e4acf39659afd4c11a10a98638990 131 Gene3D G3DSA:3.30.1490.10 74 131 5.3E-26 T 23-04-2016 CFF04554_RS00235 e59e4acf39659afd4c11a10a98638990 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 27.552 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS02740 cc8e492bcf3f5f4323d80b198b6b002a 112 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 3.0E-15 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CFF04554_RS02740 cc8e492bcf3f5f4323d80b198b6b002a 112 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 19.287 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CFF04554_RS02740 cc8e492bcf3f5f4323d80b198b6b002a 112 Pfam PF01809 Haemolytic domain 4 67 9.2E-21 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CFF04554_RS02740 cc8e492bcf3f5f4323d80b198b6b002a 112 PANTHER PTHR33383 1 68 2.3E-18 T 23-04-2016 CFF04554_RS02740 cc8e492bcf3f5f4323d80b198b6b002a 112 SMART SM01234 1 68 1.2E-25 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CFF04554_RS02740 cc8e492bcf3f5f4323d80b198b6b002a 112 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 8 72 9.1E-24 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor CFF04554_RS00215 e4984492f202686505926824b3f6fcec 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site CFF04554_RS00215 e4984492f202686505926824b3f6fcec 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.335 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00215 e4984492f202686505926824b3f6fcec 122 SUPERFAMILY SSF50193 1 122 2.88E-52 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00215 e4984492f202686505926824b3f6fcec 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.3E-55 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00215 e4984492f202686505926824b3f6fcec 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.1E-57 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CFF04554_RS00215 e4984492f202686505926824b3f6fcec 122 PANTHER PTHR11761 1 122 4.3E-73 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00215 e4984492f202686505926824b3f6fcec 122 Gene3D G3DSA:2.40.150.20 1 122 2.2E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00215 e4984492f202686505926824b3f6fcec 122 SMART SM01374 1 122 2.7E-85 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CFF04554_RS08640 b32884b6c3e057861b2acb2bfaab39d3 148 PIRSF PIRSF004638 1 147 4.3E-45 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 CFF04554_RS08640 b32884b6c3e057861b2acb2bfaab39d3 148 Pfam PF03653 Uncharacterised protein family (UPF0093) 4 144 2.5E-46 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 CFF04554_RS08640 b32884b6c3e057861b2acb2bfaab39d3 148 PANTHER PTHR40255 4 148 2.8E-33 T 23-04-2016 CFF04554_RS02405 0efa67392ec14eb49ef373b27fbaae93 939 SUPERFAMILY SSF51120 490 655 1.03E-7 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal CFF04554_RS02405 0efa67392ec14eb49ef373b27fbaae93 939 PRINTS PR00313 NodO calcium binding signature 574 582 1.5E-6 T 23-04-2016 CFF04554_RS02405 0efa67392ec14eb49ef373b27fbaae93 939 PRINTS PR00313 NodO calcium binding signature 233 244 1.5E-6 T 23-04-2016 CFF04554_RS02405 0efa67392ec14eb49ef373b27fbaae93 939 PRINTS PR00313 NodO calcium binding signature 801 810 1.5E-6 T 23-04-2016 CFF04554_RS02405 0efa67392ec14eb49ef373b27fbaae93 939 PRINTS PR00313 NodO calcium binding signature 596 604 1.5E-6 T 23-04-2016 CFF04554_RS02405 0efa67392ec14eb49ef373b27fbaae93 939 SUPERFAMILY SSF51120 698 927 4.84E-5 T 23-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal CFF04554_RS08795 7975b2e52843c1c3da36c49a6263f33f 295 SUPERFAMILY SSF102114 4 290 7.32E-24 T 23-04-2016 CFF04554_RS08795 7975b2e52843c1c3da36c49a6263f33f 295 PANTHER PTHR11228 5 181 2.5E-26 T 23-04-2016 CFF04554_RS08795 7975b2e52843c1c3da36c49a6263f33f 295 PANTHER PTHR11228 197 290 2.5E-26 T 23-04-2016 CFF04554_RS08795 7975b2e52843c1c3da36c49a6263f33f 295 Pfam PF13186 Iron-sulfur cluster-binding domain 223 288 3.1E-12 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain CFF04554_RS08795 7975b2e52843c1c3da36c49a6263f33f 295 Gene3D G3DSA:3.20.20.70 3 290 7.6E-22 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS08795 7975b2e52843c1c3da36c49a6263f33f 295 PANTHER PTHR11228:SF28 5 181 2.5E-26 T 23-04-2016 CFF04554_RS08795 7975b2e52843c1c3da36c49a6263f33f 295 PANTHER PTHR11228:SF28 197 290 2.5E-26 T 23-04-2016 CFF04554_RS09405 69b15491ce3560b0ba5b4457c4f70e3f 410 PANTHER PTHR22916 1 172 1.1E-21 T 23-04-2016 CFF04554_RS09405 69b15491ce3560b0ba5b4457c4f70e3f 410 Pfam PF00535 Glycosyl transferase family 2 3 135 1.3E-19 T 23-04-2016 IPR001173 Glycosyltransferase 2-like CFF04554_RS09405 69b15491ce3560b0ba5b4457c4f70e3f 410 SUPERFAMILY SSF53448 1 209 5.72E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS09405 69b15491ce3560b0ba5b4457c4f70e3f 410 Gene3D G3DSA:3.90.550.10 2 225 2.6E-29 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 PANTHER PTHR11712 2 401 2.9E-174 T 23-04-2016 CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 400 9.5E-178 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 SMART SM00825 Beta-ketoacyl synthase 4 404 1.2E-12 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 SUPERFAMILY SSF53901 2 248 1.51E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 Gene3D G3DSA:3.40.47.10 2 254 1.4E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 243 1.8E-53 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 Gene3D G3DSA:3.40.47.10 260 403 9.6E-55 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 PIRSF PIRSF000447 1 404 1.5E-162 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 SUPERFAMILY SSF53901 211 401 9.6E-66 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CFF04554_RS06955 acce7a08f61ac38d434394480691e349 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 251 358 1.4E-29 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal CFF04554_RS05950 c25854640ebcd8c6bfee7c7d8fc4cd41 419 PANTHER PTHR30588:SF0 1 416 3.5E-152 T 23-04-2016 CFF04554_RS05950 c25854640ebcd8c6bfee7c7d8fc4cd41 419 PANTHER PTHR30588 1 416 3.5E-152 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CFF04554_RS05950 c25854640ebcd8c6bfee7c7d8fc4cd41 419 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 1 399 2.4E-127 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CFF04554_RS05950 c25854640ebcd8c6bfee7c7d8fc4cd41 419 Pfam PF05525 Branched-chain amino acid transport protein 1 411 2.3E-141 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CFF04554_RS04710 6143fcf5f51cc5bb8bfe94a1b19d2fe7 220 PANTHER PTHR34979 1 219 1.8E-39 T 23-04-2016 CFF04554_RS04710 6143fcf5f51cc5bb8bfe94a1b19d2fe7 220 Pfam PF03591 AzlC protein 12 150 1.5E-35 T 23-04-2016 IPR011606 Branched-chain amino acid transport, permease CFF04554_RS08965 ed9c2c7acaba893e0ff11b11af4e5953 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 71 1.6E-17 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CFF04554_RS08965 ed9c2c7acaba893e0ff11b11af4e5953 109 Pfam PF03840 Preprotein translocase SecG subunit 4 70 2.8E-15 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CFF04554_RS02000 1b8b84e6ea91349cbd05c5e6c5086186 372 Gene3D G3DSA:3.40.50.2300 22 218 1.1E-46 T 23-04-2016 CFF04554_RS02000 1b8b84e6ea91349cbd05c5e6c5086186 372 PANTHER PTHR30483:SF6 4 366 7.9E-61 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CFF04554_RS02000 1b8b84e6ea91349cbd05c5e6c5086186 372 SUPERFAMILY SSF53822 21 366 5.1E-78 T 23-04-2016 IPR028082 Periplasmic binding protein-like I CFF04554_RS02000 1b8b84e6ea91349cbd05c5e6c5086186 372 Pfam PF13458 Periplasmic binding protein 22 362 9.9E-50 T 23-04-2016 IPR028081 Leucine-binding protein domain CFF04554_RS02000 1b8b84e6ea91349cbd05c5e6c5086186 372 PANTHER PTHR30483 4 366 7.9E-61 T 23-04-2016 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 PIRSF PIRSF000774 1 408 4.0E-69 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 8 405 6.9E-96 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 PANTHER PTHR32248:SF4 1 408 5.1E-62 T 23-04-2016 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 Pfam PF04963 Sigma-54 factor, core binding domain 73 245 6.5E-31 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 PANTHER PTHR32248 1 408 5.1E-62 T 23-04-2016 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 PRINTS PR00045 Sigma-54 factor signature 142 159 7.9E-15 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 PRINTS PR00045 Sigma-54 factor signature 310 322 7.9E-15 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 PRINTS PR00045 Sigma-54 factor signature 381 399 7.9E-15 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 PRINTS PR00045 Sigma-54 factor signature 326 337 7.9E-15 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 2 48 6.8E-15 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 Pfam PF04552 Sigma-54, DNA binding domain 253 406 2.1E-46 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding CFF04554_RS04280 a8d72b9e15226e9391927b9385e9c9e4 412 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 386 393 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CFF04554_RS05195 13586e65db36b1fbdb7528e004ecf952 165 Gene3D G3DSA:3.40.50.7700 4 160 2.0E-62 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CFF04554_RS05195 13586e65db36b1fbdb7528e004ecf952 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 160 5.9E-58 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CFF04554_RS05195 13586e65db36b1fbdb7528e004ecf952 165 PIRSF PIRSF001338 1 164 4.6E-63 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 CFF04554_RS05195 13586e65db36b1fbdb7528e004ecf952 165 SUPERFAMILY SSF52255 3 161 3.01E-58 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CFF04554_RS05195 13586e65db36b1fbdb7528e004ecf952 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 29.695 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CFF04554_RS05195 13586e65db36b1fbdb7528e004ecf952 165 PANTHER PTHR23046 4 165 9.2E-65 T 23-04-2016 CFF04554_RS05195 13586e65db36b1fbdb7528e004ecf952 165 Pfam PF00731 AIR carboxylase 4 149 2.4E-56 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CFF04554_RS05195 13586e65db36b1fbdb7528e004ecf952 165 SMART SM01001 2 153 3.8E-85 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 245 282 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 428 2.3E-151 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 SUPERFAMILY SSF53383 9 432 8.87E-109 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 Gene3D G3DSA:3.90.1150.10 337 432 3.7E-48 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 Gene3D G3DSA:3.90.1150.10 4 64 3.7E-48 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 PANTHER PTHR11986 1 433 6.4E-165 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 Pfam PF00202 Aminotransferase class-III 26 427 4.8E-101 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 Gene3D G3DSA:3.40.640.10 65 334 1.8E-70 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 PANTHER PTHR11986:SF8 1 433 6.4E-165 T 23-04-2016 CFF04554_RS02525 f227f5c319a67a87e8741feb32391b00 433 PIRSF PIRSF000521 20 432 3.7E-22 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CFF04554_RS06265 6aba87f8b2d4cd867cf3d11651248369 401 Pfam PF01551 Peptidase family M23 315 393 1.4E-13 T 23-04-2016 IPR016047 Peptidase M23 CFF04554_RS06265 6aba87f8b2d4cd867cf3d11651248369 401 Gene3D G3DSA:2.70.70.10 263 398 1.8E-20 T 23-04-2016 CFF04554_RS06265 6aba87f8b2d4cd867cf3d11651248369 401 SUPERFAMILY SSF51261 188 397 6.8E-21 T 23-04-2016 IPR011055 Duplicated hybrid motif CFF04554_RS07730 806fece14e42c4222a9cc395b677df87 173 SUPERFAMILY SSF103088 61 173 1.27E-29 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS07730 806fece14e42c4222a9cc395b677df87 173 PANTHER PTHR30128:SF18 21 171 9.0E-40 T 23-04-2016 CFF04554_RS07730 806fece14e42c4222a9cc395b677df87 173 Gene3D G3DSA:3.30.1330.60 63 172 8.3E-30 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS07730 806fece14e42c4222a9cc395b677df87 173 PRINTS PR01021 OMPA domain signature 69 91 5.8E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CFF04554_RS07730 806fece14e42c4222a9cc395b677df87 173 PRINTS PR01021 OMPA domain signature 116 132 5.8E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CFF04554_RS07730 806fece14e42c4222a9cc395b677df87 173 PRINTS PR01021 OMPA domain signature 101 116 5.8E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CFF04554_RS07730 806fece14e42c4222a9cc395b677df87 173 PANTHER PTHR30128 21 171 9.0E-40 T 23-04-2016 CFF04554_RS07730 806fece14e42c4222a9cc395b677df87 173 Pfam PF00691 OmpA family 68 165 5.4E-18 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS00530 c1e922db4ed17fe8591397f0d5ce7d32 98 PANTHER PTHR33219:SF5 1 98 2.7E-17 T 23-04-2016 CFF04554_RS00530 c1e922db4ed17fe8591397f0d5ce7d32 98 PANTHER PTHR33219 1 98 2.7E-17 T 23-04-2016 CFF04554_RS00530 c1e922db4ed17fe8591397f0d5ce7d32 98 Pfam PF02325 YGGT family 16 86 3.4E-19 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 CFF04554_RS07205 606c2ff4144e3f74b464a7b6c1454392 104 SUPERFAMILY SSF46626 17 104 3.81E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07205 606c2ff4144e3f74b464a7b6c1454392 104 Pfam PF00034 Cytochrome c 19 104 2.0E-9 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07205 606c2ff4144e3f74b464a7b6c1454392 104 Gene3D G3DSA:1.10.760.10 19 104 2.3E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS09030 edf4a9b0ed33c1ebe296083af241a400 206 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 13 199 1.1E-46 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CFF04554_RS09030 edf4a9b0ed33c1ebe296083af241a400 206 PANTHER PTHR34934 1 199 1.1E-22 T 23-04-2016 CFF04554_RS09030 edf4a9b0ed33c1ebe296083af241a400 206 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 1 205 24.316 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CFF04554_RS09030 edf4a9b0ed33c1ebe296083af241a400 206 Pfam PF02511 Thymidylate synthase complementing protein 13 190 1.6E-44 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CFF04554_RS09030 edf4a9b0ed33c1ebe296083af241a400 206 SUPERFAMILY SSF69796 1 201 3.79E-50 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CFF04554_RS08165 3824f01cb33a442bd0a9cac4e8f1281f 241 Pfam PF13489 Methyltransferase domain 34 196 8.7E-20 T 23-04-2016 CFF04554_RS08165 3824f01cb33a442bd0a9cac4e8f1281f 241 SUPERFAMILY SSF53335 32 210 1.49E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08165 3824f01cb33a442bd0a9cac4e8f1281f 241 Gene3D G3DSA:3.40.50.150 34 238 2.6E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03415 317133bdec45606940a752a976ceb001 274 SMART SM00271 203 266 3.8E-11 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03415 317133bdec45606940a752a976ceb001 274 SUPERFAMILY SSF46565 202 262 4.97E-13 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03415 317133bdec45606940a752a976ceb001 274 Gene3D G3DSA:1.10.287.110 204 262 9.6E-12 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS03415 317133bdec45606940a752a976ceb001 274 Pfam PF00226 DnaJ domain 205 262 1.2E-9 T 23-04-2016 IPR001623 DnaJ domain CFF04554_RS08205 d7465bc1d1cac66e468eae0c05cdaf2f 452 Gene3D G3DSA:3.40.50.1110 226 450 1.1E-9 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CFF04554_RS08205 d7465bc1d1cac66e468eae0c05cdaf2f 452 SUPERFAMILY SSF52266 222 287 7.33E-10 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CFF04554_RS08205 d7465bc1d1cac66e468eae0c05cdaf2f 452 SUPERFAMILY SSF52266 337 450 7.33E-10 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 SUPERFAMILY SSF48557 7 459 1.49E-137 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 Gene3D G3DSA:1.10.275.10 2 108 4.1E-42 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 458 2.0E-183 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 Gene3D G3DSA:1.20.200.10 109 375 3.1E-91 T 23-04-2016 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PANTHER PTHR11444 1 458 1.1E-218 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 Pfam PF14698 Argininosuccinate lyase C-terminal 367 432 1.0E-19 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PANTHER PTHR11444:SF3 1 458 1.1E-218 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 5.1E-60 T 23-04-2016 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 5.1E-60 T 23-04-2016 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 5.1E-60 T 23-04-2016 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 5.1E-60 T 23-04-2016 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 5.1E-60 T 23-04-2016 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 5.1E-60 T 23-04-2016 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 456 41.263 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 Gene3D G3DSA:1.10.40.30 376 432 2.0E-25 T 23-04-2016 CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 Pfam PF00206 Lyase 7 302 5.5E-75 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 3.8E-24 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 3.8E-24 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 3.8E-24 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS06655 eccd161c9168b3cd5940f3643d0a54db 462 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 3.8E-24 T 23-04-2016 IPR000362 Fumarate lyase family CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 PRINTS PR01607 Apyrase family signature 108 131 1.6E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 PRINTS PR01607 Apyrase family signature 136 156 1.6E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 PRINTS PR01607 Apyrase family signature 82 99 1.6E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 PRINTS PR01607 Apyrase family signature 325 344 1.6E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 PRINTS PR01607 Apyrase family signature 255 278 1.6E-25 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 PANTHER PTHR11575 3 372 1.6E-69 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 Pfam PF02872 5'-nucleotidase, C-terminal domain 198 351 3.5E-32 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 24 126 1.4E-4 T 23-04-2016 IPR019079 Capsule synthesis protein, CapA CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 SUPERFAMILY SSF56300 4 194 4.29E-38 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 Gene3D G3DSA:3.60.21.10 4 185 1.3E-41 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 SUPERFAMILY SSF55816 199 372 1.83E-41 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 CFF04554_RS08825 54bcf49892d86d9792ae9adb65952732 378 Gene3D G3DSA:3.90.780.10 197 372 8.4E-43 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 CFF04554_RS06735 4f858d0dcd932323990d73d5bd315a98 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 157 22.641 T 23-04-2016 IPR022973 Ribosomal protein L10 CFF04554_RS06735 4f858d0dcd932323990d73d5bd315a98 164 SUPERFAMILY SSF160369 2 156 2.22E-41 T 23-04-2016 CFF04554_RS06735 4f858d0dcd932323990d73d5bd315a98 164 PANTHER PTHR11560 1 156 3.9E-29 T 23-04-2016 CFF04554_RS06735 4f858d0dcd932323990d73d5bd315a98 164 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 23-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS06735 4f858d0dcd932323990d73d5bd315a98 164 Pfam PF00466 Ribosomal protein L10 2 94 9.5E-20 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CFF04554_RS06180 42c5452464c6d5f3ffc7db03b181fae0 172 PANTHER PTHR10286 16 172 1.3E-67 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CFF04554_RS06180 42c5452464c6d5f3ffc7db03b181fae0 172 Gene3D G3DSA:3.90.80.10 6 172 4.2E-60 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CFF04554_RS06180 42c5452464c6d5f3ffc7db03b181fae0 172 Pfam PF00719 Inorganic pyrophosphatase 17 172 1.9E-54 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CFF04554_RS06180 42c5452464c6d5f3ffc7db03b181fae0 172 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 13 172 36.407 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CFF04554_RS06180 42c5452464c6d5f3ffc7db03b181fae0 172 SUPERFAMILY SSF50324 10 172 1.7E-64 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CFF04554_RS08000 60a66bd1ac4444b71b76627c4d91ada9 195 SUPERFAMILY SSF142695 7 162 2.22E-50 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CFF04554_RS08000 60a66bd1ac4444b71b76627c4d91ada9 195 PANTHER PTHR21327 2 191 5.6E-78 T 23-04-2016 CFF04554_RS08000 60a66bd1ac4444b71b76627c4d91ada9 195 Pfam PF00925 GTP cyclohydrolase II 9 162 2.3E-56 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CFF04554_RS08000 60a66bd1ac4444b71b76627c4d91ada9 195 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 192 37.009 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CFF04554_RS08000 60a66bd1ac4444b71b76627c4d91ada9 195 PANTHER PTHR21327:SF6 2 191 5.6E-78 T 23-04-2016 CFF04554_RS08000 60a66bd1ac4444b71b76627c4d91ada9 195 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 8 190 3.2E-69 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CFF04554_RS01190 496d7b0c0f5ca8315bc445f83ce7b4a9 734 Pfam PF05872 Bacterial protein of unknown function (DUF853) 250 418 1.6E-4 T 23-04-2016 IPR033186 Helicase HerA-like C-terminal CFF04554_RS01190 496d7b0c0f5ca8315bc445f83ce7b4a9 734 Gene3D G3DSA:3.40.50.300 250 404 5.4E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01190 496d7b0c0f5ca8315bc445f83ce7b4a9 734 Gene3D G3DSA:3.40.50.300 11 71 5.4E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01190 496d7b0c0f5ca8315bc445f83ce7b4a9 734 Gene3D G3DSA:3.40.50.300 112 113 5.4E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01190 496d7b0c0f5ca8315bc445f83ce7b4a9 734 SUPERFAMILY SSF52540 119 412 7.96E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01190 496d7b0c0f5ca8315bc445f83ce7b4a9 734 SUPERFAMILY SSF52540 15 74 7.96E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01190 496d7b0c0f5ca8315bc445f83ce7b4a9 734 PANTHER PTHR30121 9 479 1.0E-24 T 23-04-2016 CFF04554_RS01190 496d7b0c0f5ca8315bc445f83ce7b4a9 734 Pfam PF01935 Domain of unknown function DUF87 16 67 3.5E-8 T 23-04-2016 IPR002789 Helicase HerA, central domain CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 SUPERFAMILY SSF75620 10 350 4.58E-128 T 23-04-2016 CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 Gene3D G3DSA:1.20.58.410 6 90 2.2E-15 T 23-04-2016 CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 PANTHER PTHR11075:SF9 1 353 1.0E-155 T 23-04-2016 CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 354 38.973 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 Pfam PF00472 RF-1 domain 208 317 1.1E-39 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 351 1.2E-156 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 Gene3D G3DSA:3.30.160.20 207 285 3.0E-32 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 Pfam PF03462 PCRF domain 11 200 1.8E-67 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 PANTHER PTHR11075 1 353 1.0E-155 T 23-04-2016 CFF04554_RS08665 a899b655ad96ce1630b1b7f82087566a 355 SMART SM00937 60 175 4.5E-52 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CFF04554_RS08330 dbafbbf95a693595acaba48fe7a25148 145 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 2 138 3.4E-65 T 23-04-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 CFF04554_RS08330 dbafbbf95a693595acaba48fe7a25148 145 Pfam PF01618 MotA/TolQ/ExbB proton channel family 46 136 5.5E-28 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CFF04554_RS08330 dbafbbf95a693595acaba48fe7a25148 145 PANTHER PTHR30625:SF6 16 139 5.7E-27 T 23-04-2016 CFF04554_RS08330 dbafbbf95a693595acaba48fe7a25148 145 PANTHER PTHR30625 16 139 5.7E-27 T 23-04-2016 CFF04554_RS03795 0f757b322efb47d6d626e1423a474570 301 PANTHER PTHR36838 1 301 1.4E-36 T 23-04-2016 CFF04554_RS03795 0f757b322efb47d6d626e1423a474570 301 Pfam PF03547 Membrane transport protein 2 151 4.6E-15 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CFF04554_RS03795 0f757b322efb47d6d626e1423a474570 301 Pfam PF03547 Membrane transport protein 155 294 8.5E-8 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CFF04554_RS06835 3b985d9dc64230faa743c01810475caa 296 SUPERFAMILY SSF103481 44 143 2.48E-14 T 23-04-2016 CFF04554_RS06835 3b985d9dc64230faa743c01810475caa 296 Pfam PF00892 EamA-like transporter family 10 140 2.9E-20 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CFF04554_RS06835 3b985d9dc64230faa743c01810475caa 296 SUPERFAMILY SSF103481 205 293 9.55E-5 T 23-04-2016 CFF04554_RS06835 3b985d9dc64230faa743c01810475caa 296 PANTHER PTHR22911 8 296 9.8E-50 T 23-04-2016 CFF04554_RS06835 3b985d9dc64230faa743c01810475caa 296 PANTHER PTHR22911:SF6 8 296 9.8E-50 T 23-04-2016 CFF04554_RS06870 6bf3b6d339420831fcc144bfa6fafd6c 244 PANTHER PTHR15362:SF5 7 244 2.2E-30 T 23-04-2016 CFF04554_RS06870 6bf3b6d339420831fcc144bfa6fafd6c 244 PANTHER PTHR15362 7 244 2.2E-30 T 23-04-2016 CFF04554_RS06870 6bf3b6d339420831fcc144bfa6fafd6c 244 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 52 74 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CFF04554_RS06870 6bf3b6d339420831fcc144bfa6fafd6c 244 Pfam PF01066 CDP-alcohol phosphatidyltransferase 10 74 8.5E-14 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CFF04554_RS06870 6bf3b6d339420831fcc144bfa6fafd6c 244 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 16 178 1.9E-45 T 23-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CFF04554_RS08005 2b66264a9289564ce257f03f7249e9d3 182 PANTHER PTHR31760:SF0 1 161 4.6E-23 T 23-04-2016 CFF04554_RS08005 2b66264a9289564ce257f03f7249e9d3 182 PIRSF PIRSF003078 3 181 4.0E-31 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CFF04554_RS08005 2b66264a9289564ce257f03f7249e9d3 182 PANTHER PTHR31760 1 161 4.6E-23 T 23-04-2016 CFF04554_RS08005 2b66264a9289564ce257f03f7249e9d3 182 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 14 163 2.7E-34 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CFF04554_RS08005 2b66264a9289564ce257f03f7249e9d3 182 Pfam PF02527 rRNA small subunit methyltransferase G 10 173 2.3E-34 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CFF04554_RS08005 2b66264a9289564ce257f03f7249e9d3 182 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 2 176 17.667 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CFF04554_RS08005 2b66264a9289564ce257f03f7249e9d3 182 Gene3D G3DSA:3.40.50.150 2 164 5.5E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08005 2b66264a9289564ce257f03f7249e9d3 182 SUPERFAMILY SSF53335 2 166 4.41E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 PANTHER PTHR32338:SF8 2 342 9.1E-117 T 23-04-2016 CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 SUPERFAMILY SSF55347 147 310 1.16E-39 T 23-04-2016 CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 138 6.0E-27 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 142 158 - T 23-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 169 312 1.4E-8 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 4 339 3.5E-101 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 336 34.537 T 23-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 Gene3D G3DSA:3.30.360.10 154 310 5.6E-42 T 23-04-2016 CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 Gene3D G3DSA:3.40.50.720 1 153 3.8E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 SMART SM00859 4 139 3.5E-37 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 SUPERFAMILY SSF51735 1 164 3.06E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS01650 141df5ef0af5147450c1da8630cc28d0 342 PANTHER PTHR32338 2 342 9.1E-117 T 23-04-2016 CFF04554_RS07355 2dd23c91e9a438cb7052aa3a5ca63e0d 229 SUPERFAMILY SSF64438 7 225 6.59E-63 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic CFF04554_RS07355 2dd23c91e9a438cb7052aa3a5ca63e0d 229 PANTHER PTHR30616 8 226 1.5E-61 T 23-04-2016 CFF04554_RS07355 2dd23c91e9a438cb7052aa3a5ca63e0d 229 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 15 223 1.0E-59 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CFF04554_RS07355 2dd23c91e9a438cb7052aa3a5ca63e0d 229 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 23 224 1.7E-43 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CFF04554_RS07355 2dd23c91e9a438cb7052aa3a5ca63e0d 229 Gene3D G3DSA:3.60.140.10 8 226 1.3E-65 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CFF04554_RS00900 a3d1f26fabf2cf2ded61292ac48a1479 340 SUPERFAMILY SSF53850 25 338 7.72E-80 T 23-04-2016 CFF04554_RS00900 a3d1f26fabf2cf2ded61292ac48a1479 340 PANTHER PTHR30570:SF0 1 332 3.6E-94 T 23-04-2016 CFF04554_RS00900 a3d1f26fabf2cf2ded61292ac48a1479 340 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 25 332 3.0E-87 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CFF04554_RS00900 a3d1f26fabf2cf2ded61292ac48a1479 340 Pfam PF12849 PBP superfamily domain 22 306 6.3E-55 T 23-04-2016 IPR024370 PBP domain CFF04554_RS00900 a3d1f26fabf2cf2ded61292ac48a1479 340 Gene3D G3DSA:3.40.190.10 100 277 1.2E-60 T 23-04-2016 CFF04554_RS00900 a3d1f26fabf2cf2ded61292ac48a1479 340 PANTHER PTHR30570 1 332 3.6E-94 T 23-04-2016 CFF04554_RS00900 a3d1f26fabf2cf2ded61292ac48a1479 340 PIRSF PIRSF002756 1 338 4.8E-109 T 23-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 Pfam PF02934 GatB/GatE catalytic domain 4 288 1.3E-114 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 SUPERFAMILY SSF89095 295 399 9.42E-29 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 SMART SM00845 326 472 6.6E-68 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 SUPERFAMILY SSF55931 3 290 2.49E-121 T 23-04-2016 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 472 3.0E-188 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 140 154 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 Pfam PF02637 GatB domain 326 472 9.4E-46 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 PANTHER PTHR11659:SF0 2 472 4.4E-231 T 23-04-2016 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 PANTHER PTHR11659 2 472 4.4E-231 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 CFF04554_RS03885 47f3280b86beea8704913be85033881c 472 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 1 472 36.924 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CFF04554_RS01560 c3b9af5debd15dafc2f2593787118e62 355 Pfam PF02677 Uncharacterized BCR, COG1636 1 175 3.5E-55 T 23-04-2016 IPR003828 Protein of unknown function DUF208 CFF04554_RS01560 c3b9af5debd15dafc2f2593787118e62 355 SUPERFAMILY SSF52402 10 112 2.81E-7 T 23-04-2016 CFF04554_RS01560 c3b9af5debd15dafc2f2593787118e62 355 Gene3D G3DSA:3.40.50.620 9 113 4.3E-5 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS01560 c3b9af5debd15dafc2f2593787118e62 355 PANTHER PTHR36701 1 187 3.4E-57 T 23-04-2016 CFF04554_RS04930 ec97b3c5a60fc6e2b79d02a166d0d12f 65 Gene3D G3DSA:3.30.450.20 8 53 3.9E-11 T 23-04-2016 CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 451 4.7E-116 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PRINTS PR01806 Virulence factor MviN signature 31 50 5.0E-53 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PRINTS PR01806 Virulence factor MviN signature 354 373 5.0E-53 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PRINTS PR01806 Virulence factor MviN signature 50 66 5.0E-53 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PRINTS PR01806 Virulence factor MviN signature 147 168 5.0E-53 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PRINTS PR01806 Virulence factor MviN signature 256 282 5.0E-53 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PRINTS PR01806 Virulence factor MviN signature 123 147 5.0E-53 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PRINTS PR01806 Virulence factor MviN signature 406 423 5.0E-53 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PANTHER PTHR11206:SF90 55 72 5.7E-35 T 23-04-2016 CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PANTHER PTHR11206:SF90 213 464 5.7E-35 T 23-04-2016 CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 Pfam PF03023 MviN-like protein 27 458 1.7E-108 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PANTHER PTHR11206 55 72 5.7E-35 T 23-04-2016 CFF04554_RS03960 6c76cb2ad1eaacba031d843c8cf77a8b 466 PANTHER PTHR11206 213 464 5.7E-35 T 23-04-2016 CFF04554_RS06350 4a1c0fb867a1d3d333c6cec4689bf1c6 242 PANTHER PTHR18966:SF152 22 239 9.0E-47 T 23-04-2016 CFF04554_RS06350 4a1c0fb867a1d3d333c6cec4689bf1c6 242 SMART SM00079 23 238 0.0018 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CFF04554_RS06350 4a1c0fb867a1d3d333c6cec4689bf1c6 242 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 239 7.8E-63 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS06350 4a1c0fb867a1d3d333c6cec4689bf1c6 242 Gene3D G3DSA:3.40.190.10 101 196 5.9E-19 T 23-04-2016 CFF04554_RS06350 4a1c0fb867a1d3d333c6cec4689bf1c6 242 SUPERFAMILY SSF53850 1 239 6.34E-64 T 23-04-2016 CFF04554_RS06350 4a1c0fb867a1d3d333c6cec4689bf1c6 242 PANTHER PTHR18966 22 239 9.0E-47 T 23-04-2016 CFF04554_RS06350 4a1c0fb867a1d3d333c6cec4689bf1c6 242 Gene3D G3DSA:3.40.190.10 201 239 3.1E-42 T 23-04-2016 CFF04554_RS06350 4a1c0fb867a1d3d333c6cec4689bf1c6 242 Gene3D G3DSA:3.40.190.10 21 100 3.1E-42 T 23-04-2016 CFF04554_RS06350 4a1c0fb867a1d3d333c6cec4689bf1c6 242 SMART SM00062 23 242 6.7E-65 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS03680 f0b8bb70b6f164071908422b8c9834cc 514 SUPERFAMILY SSF55073 358 511 1.96E-42 T 23-04-2016 IPR029787 Nucleotide cyclase CFF04554_RS03680 f0b8bb70b6f164071908422b8c9834cc 514 SMART SM00267 346 513 8.3E-41 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS03680 f0b8bb70b6f164071908422b8c9834cc 514 Gene3D G3DSA:3.30.70.270 356 511 2.8E-44 T 23-04-2016 CFF04554_RS03680 f0b8bb70b6f164071908422b8c9834cc 514 Pfam PF00990 Diguanylate cyclase, GGDEF domain 355 508 9.1E-36 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS03680 f0b8bb70b6f164071908422b8c9834cc 514 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 510 5.1E-43 T 23-04-2016 IPR000160 GGDEF domain CFF04554_RS03680 f0b8bb70b6f164071908422b8c9834cc 514 PANTHER PTHR10799:SF750 1 69 2.5E-27 T 23-04-2016 CFF04554_RS03680 f0b8bb70b6f164071908422b8c9834cc 514 PANTHER PTHR10799:SF750 386 510 2.5E-27 T 23-04-2016 CFF04554_RS03680 f0b8bb70b6f164071908422b8c9834cc 514 PANTHER PTHR10799 1 69 2.5E-27 T 23-04-2016 CFF04554_RS03680 f0b8bb70b6f164071908422b8c9834cc 514 PANTHER PTHR10799 386 510 2.5E-27 T 23-04-2016 CFF04554_RS00805 fc0a7f97c14b3286a6a0cb7f82ab59eb 406 SUPERFAMILY SSF142019 6 226 1.16E-60 T 23-04-2016 CFF04554_RS00805 fc0a7f97c14b3286a6a0cb7f82ab59eb 406 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 318 399 5.5E-23 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CFF04554_RS00805 fc0a7f97c14b3286a6a0cb7f82ab59eb 406 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 329 340 - T 23-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 CFF04554_RS00805 fc0a7f97c14b3286a6a0cb7f82ab59eb 406 SUPERFAMILY SSF142984 228 311 3.4E-20 T 23-04-2016 CFF04554_RS00805 fc0a7f97c14b3286a6a0cb7f82ab59eb 406 SUPERFAMILY SSF140490 313 404 6.8E-28 T 23-04-2016 CFF04554_RS00805 fc0a7f97c14b3286a6a0cb7f82ab59eb 406 PANTHER PTHR11780 3 400 1.6E-158 T 23-04-2016 CFF04554_RS00805 fc0a7f97c14b3286a6a0cb7f82ab59eb 406 SMART SM00928 316 361 5.8E-22 T 23-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 CFF04554_RS00805 fc0a7f97c14b3286a6a0cb7f82ab59eb 406 PANTHER PTHR11780:SF10 3 400 1.6E-158 T 23-04-2016 CFF04554_RS00805 fc0a7f97c14b3286a6a0cb7f82ab59eb 406 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 43 205 1.5E-44 T 23-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain CFF04554_RS04025 ab669a27d7a0e2f156fcb9ad8cd9a9b8 124 Pfam PF04170 NlpE N-terminal domain 30 113 1.9E-19 T 23-04-2016 IPR007298 Copper resistance lipoprotein NlpE CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 Pfam PF00390 Malic enzyme, N-terminal domain 14 146 6.6E-30 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 SMART SM01274 13 146 4.8E-84 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 PANTHER PTHR23406 1 396 7.2E-169 T 23-04-2016 CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 SUPERFAMILY SSF51735 158 407 6.53E-84 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 Gene3D G3DSA:3.40.50.10380 7 155 1.2E-52 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 Gene3D G3DSA:3.40.50.720 156 409 6.9E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 SUPERFAMILY SSF53223 7 156 1.29E-53 T 23-04-2016 CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 SMART SM00919 158 392 5.4E-142 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 PANTHER PTHR23406:SF23 1 396 7.2E-169 T 23-04-2016 CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 ProSitePatterns PS00331 Malic enzymes signature. 154 170 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CFF04554_RS07925 5b30b3e49fa366046de8c8f26f839cae 415 Pfam PF03949 Malic enzyme, NAD binding domain 160 349 1.3E-22 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CFF04554_RS05165 d52596ac5ae7845b4dda8ea29b2b8fbf 254 SUPERFAMILY SSF55120 58 226 6.88E-40 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS05165 d52596ac5ae7845b4dda8ea29b2b8fbf 254 PANTHER PTHR11079 60 224 1.0E-30 T 23-04-2016 CFF04554_RS05165 d52596ac5ae7845b4dda8ea29b2b8fbf 254 PANTHER PTHR11079:SF85 60 224 1.0E-30 T 23-04-2016 CFF04554_RS05165 d52596ac5ae7845b4dda8ea29b2b8fbf 254 Pfam PF00849 RNA pseudouridylate synthase 86 198 1.1E-23 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS03010 caf31b8323ab53ebabc802d10b73d138 363 SUPERFAMILY SSF142433 202 357 8.5E-50 T 23-04-2016 IPR008136 CinA, C-terminal CFF04554_RS03010 caf31b8323ab53ebabc802d10b73d138 363 Gene3D G3DSA:3.90.950.20 202 357 1.2E-53 T 23-04-2016 IPR008136 CinA, C-terminal CFF04554_RS03010 caf31b8323ab53ebabc802d10b73d138 363 PANTHER PTHR13939:SF0 202 356 1.1E-50 T 23-04-2016 CFF04554_RS03010 caf31b8323ab53ebabc802d10b73d138 363 Pfam PF02464 Competence-damaged protein 205 356 3.1E-53 T 23-04-2016 IPR008136 CinA, C-terminal CFF04554_RS03010 caf31b8323ab53ebabc802d10b73d138 363 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 210 356 4.2E-44 T 23-04-2016 IPR008136 CinA, C-terminal CFF04554_RS03010 caf31b8323ab53ebabc802d10b73d138 363 PANTHER PTHR13939 202 356 1.1E-50 T 23-04-2016 CFF04554_RS06255 13eee5c2a039d5b9a6170d4e10de07ed 73 Pfam PF01192 RNA polymerase Rpb6 18 63 1.9E-9 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06255 13eee5c2a039d5b9a6170d4e10de07ed 73 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 17 63 8.7E-6 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06255 13eee5c2a039d5b9a6170d4e10de07ed 73 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 4 66 12.396 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06255 13eee5c2a039d5b9a6170d4e10de07ed 73 Gene3D G3DSA:3.90.940.10 16 66 6.5E-8 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06255 13eee5c2a039d5b9a6170d4e10de07ed 73 SMART SM01409 11 65 3.5E-7 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS06255 13eee5c2a039d5b9a6170d4e10de07ed 73 SUPERFAMILY SSF63562 15 70 2.88E-14 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CFF04554_RS00935 fa090aa32ad220bd4887e5dce215704f 138 PANTHER PTHR23091:SF247 1 138 8.6E-18 T 23-04-2016 CFF04554_RS00935 fa090aa32ad220bd4887e5dce215704f 138 PANTHER PTHR23091 1 138 8.6E-18 T 23-04-2016 CFF04554_RS00935 fa090aa32ad220bd4887e5dce215704f 138 Gene3D G3DSA:3.40.630.30 1 137 5.0E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS00935 fa090aa32ad220bd4887e5dce215704f 138 Pfam PF13673 Acetyltransferase (GNAT) domain 29 137 1.5E-12 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CFF04554_RS00935 fa090aa32ad220bd4887e5dce215704f 138 SUPERFAMILY SSF55729 1 137 1.65E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS05400 25607b4bfa8650344a7fc3ddc90a036b 84 Pfam PF01381 Helix-turn-helix 22 55 2.5E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CFF04554_RS05400 25607b4bfa8650344a7fc3ddc90a036b 84 SUPERFAMILY SSF47413 22 55 1.97E-6 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CFF04554_RS05400 25607b4bfa8650344a7fc3ddc90a036b 84 Gene3D G3DSA:1.10.260.40 22 65 5.2E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CFF04554_RS06375 f946d81987a1bab4ccd9e7538c4d2124 261 Gene3D G3DSA:3.40.1350.10 154 258 2.3E-7 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CFF04554_RS06375 f946d81987a1bab4ccd9e7538c4d2124 261 Pfam PF03008 Archaea bacterial proteins of unknown function 120 206 6.2E-14 T 23-04-2016 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal CFF04554_RS06375 f946d81987a1bab4ccd9e7538c4d2124 261 SUPERFAMILY SSF52980 155 256 4.24E-5 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 4 364 3.0E-131 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 SUPERFAMILY SSF53187 3 170 2.77E-56 T 23-04-2016 CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 SUPERFAMILY SSF53187 283 364 2.77E-56 T 23-04-2016 CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 93 127 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 1 365 42.973 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 Gene3D G3DSA:3.30.70.360 180 271 1.2E-20 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 Pfam PF07687 Peptidase dimerisation domain 167 265 1.5E-13 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 SUPERFAMILY SSF55031 171 273 1.06E-19 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 Gene3D G3DSA:3.40.630.10 307 364 4.1E-63 T 23-04-2016 CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 Gene3D G3DSA:3.40.630.10 2 179 4.1E-63 T 23-04-2016 CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 PANTHER PTHR11014 2 364 1.8E-67 T 23-04-2016 CFF04554_RS03105 321ce158fe8b8becb5ef3c6fd58dcbfb 365 Pfam PF01546 Peptidase family M20/M25/M40 60 363 2.8E-36 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CFF04554_RS04080 8c9f59452467f67646332d7b0c445e53 464 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 157 457 1.9E-115 T 23-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CFF04554_RS04080 8c9f59452467f67646332d7b0c445e53 464 Pfam PF01515 Phosphate acetyl/butaryl transferase 142 458 4.9E-119 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CFF04554_RS04080 8c9f59452467f67646332d7b0c445e53 464 SUPERFAMILY SSF53659 142 461 2.92E-93 T 23-04-2016 CFF04554_RS04080 8c9f59452467f67646332d7b0c445e53 464 Gene3D G3DSA:3.40.50.10750 275 434 1.4E-62 T 23-04-2016 CFF04554_RS04080 8c9f59452467f67646332d7b0c445e53 464 PANTHER PTHR23406 5 462 1.0E-47 T 23-04-2016 CFF04554_RS04080 8c9f59452467f67646332d7b0c445e53 464 PANTHER PTHR23406:SF3 5 462 1.0E-47 T 23-04-2016 CFF04554_RS01545 946e1dccdd114da411337225d459900e 66 Gene3D G3DSA:3.30.429.20 1 59 6.2E-13 T 23-04-2016 CFF04554_RS01545 946e1dccdd114da411337225d459900e 66 SUPERFAMILY SSF55331 2 63 3.1E-13 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily CFF04554_RS01545 946e1dccdd114da411337225d459900e 66 Pfam PF01361 Tautomerase enzyme 2 61 1.2E-13 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CFF04554_RS04010 4ed0475627f9465795098cd4c108d584 183 SUPERFAMILY SSF48695 7 170 2.98E-27 T 23-04-2016 IPR011031 Multihaem cytochrome CFF04554_RS04010 4ed0475627f9465795098cd4c108d584 183 Gene3D G3DSA:1.10.3820.10 3 167 1.1E-21 T 23-04-2016 CFF04554_RS04010 4ed0475627f9465795098cd4c108d584 183 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 3 168 3.8E-44 T 23-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal CFF04554_RS04010 4ed0475627f9465795098cd4c108d584 183 PIRSF PIRSF000013 1 173 1.2E-19 T 23-04-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CFF04554_RS04010 4ed0475627f9465795098cd4c108d584 183 PANTHER PTHR30333 9 166 2.3E-19 T 23-04-2016 CFF04554_RS01105 e7afa181bacbbdb9a32c24794beef5fb 241 PANTHER PTHR11228:SF6 51 193 1.1E-18 T 23-04-2016 CFF04554_RS01105 e7afa181bacbbdb9a32c24794beef5fb 241 PANTHER PTHR11228:SF6 1 34 1.1E-18 T 23-04-2016 CFF04554_RS01105 e7afa181bacbbdb9a32c24794beef5fb 241 Gene3D G3DSA:3.20.20.70 28 174 2.3E-9 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS01105 e7afa181bacbbdb9a32c24794beef5fb 241 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 238 37.169 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CFF04554_RS01105 e7afa181bacbbdb9a32c24794beef5fb 241 SUPERFAMILY SSF102114 53 144 9.03E-8 T 23-04-2016 CFF04554_RS01105 e7afa181bacbbdb9a32c24794beef5fb 241 Pfam PF13353 4Fe-4S single cluster domain 11 166 4.0E-32 T 23-04-2016 CFF04554_RS01105 e7afa181bacbbdb9a32c24794beef5fb 241 PANTHER PTHR11228 51 193 1.1E-18 T 23-04-2016 CFF04554_RS01105 e7afa181bacbbdb9a32c24794beef5fb 241 PANTHER PTHR11228 1 34 1.1E-18 T 23-04-2016 CFF04554_RS09010 38299a55927599f0d078c4136bcc0bb1 193 Gene3D G3DSA:3.40.50.360 2 192 4.0E-39 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS09010 38299a55927599f0d078c4136bcc0bb1 193 PANTHER PTHR10204 2 192 2.5E-108 T 23-04-2016 CFF04554_RS09010 38299a55927599f0d078c4136bcc0bb1 193 SUPERFAMILY SSF52218 2 192 4.75E-38 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS09010 38299a55927599f0d078c4136bcc0bb1 193 PANTHER PTHR10204:SF36 2 192 2.5E-108 T 23-04-2016 CFF04554_RS09010 38299a55927599f0d078c4136bcc0bb1 193 Pfam PF02525 Flavodoxin-like fold 2 188 2.0E-30 T 23-04-2016 IPR003680 Flavodoxin-like fold CFF04554_RS07780 4333f40bdea7c7eb3d81e01a608b6ed8 172 Hamap MF_01398 ATP synthase subunit b [atpF]. 16 171 8.575 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CFF04554_RS07780 4333f40bdea7c7eb3d81e01a608b6ed8 172 Pfam PF00430 ATP synthase B/B' CF(0) 29 145 8.9E-11 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CFF04554_RS01085 9a672083eae9b02db0df1ae9008a2409 289 PANTHER PTHR11048 8 282 6.4E-44 T 23-04-2016 CFF04554_RS01085 9a672083eae9b02db0df1ae9008a2409 289 PANTHER PTHR11048:SF7 8 282 6.4E-44 T 23-04-2016 CFF04554_RS01085 9a672083eae9b02db0df1ae9008a2409 289 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 8 288 7.4E-94 T 23-04-2016 IPR006371 4-hydroxybenzoate polyprenyltransferase-related CFF04554_RS01085 9a672083eae9b02db0df1ae9008a2409 289 Pfam PF01040 UbiA prenyltransferase family 26 279 6.9E-46 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CFF04554_RS05870 d2984d0fe0be6c872be4c3b10e34b14e 419 Gene3D G3DSA:3.30.565.10 296 409 4.7E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS05870 d2984d0fe0be6c872be4c3b10e34b14e 419 SMART SM00387 311 413 0.001 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS05870 d2984d0fe0be6c872be4c3b10e34b14e 419 Gene3D G3DSA:1.10.287.130 203 260 1.1E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS05870 d2984d0fe0be6c872be4c3b10e34b14e 419 SUPERFAMILY SSF47384 194 263 2.55E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS05870 d2984d0fe0be6c872be4c3b10e34b14e 419 SUPERFAMILY SSF55874 277 407 1.44E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS04755 9644c3bcb3df24604e815648ad71a467 183 Gene3D G3DSA:2.80.10.50 18 182 2.2E-37 T 23-04-2016 CFF04554_RS04755 9644c3bcb3df24604e815648ad71a467 183 Pfam PF03498 Cytolethal distending toxin A/C domain 34 179 2.6E-15 T 23-04-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 CFF04554_RS04755 9644c3bcb3df24604e815648ad71a467 183 SUPERFAMILY SSF50370 21 182 5.19E-36 T 23-04-2016 IPR000772 Ricin B, lectin domain CFF04554_RS04950 9c9dcd1c22ae0bad9b4446b8aee8750f 338 SUPERFAMILY SSF55821 2 202 7.55E-78 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CFF04554_RS04950 9c9dcd1c22ae0bad9b4446b8aee8750f 338 SUPERFAMILY SSF142695 230 337 8.11E-15 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CFF04554_RS04950 9c9dcd1c22ae0bad9b4446b8aee8750f 338 PIRSF PIRSF001259 1 296 7.7E-79 T 23-04-2016 CFF04554_RS04950 9c9dcd1c22ae0bad9b4446b8aee8750f 338 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 37.042 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS04950 9c9dcd1c22ae0bad9b4446b8aee8750f 338 PANTHER PTHR21327:SF6 1 334 4.1E-102 T 23-04-2016 CFF04554_RS04950 9c9dcd1c22ae0bad9b4446b8aee8750f 338 PANTHER PTHR21327 1 334 4.1E-102 T 23-04-2016 CFF04554_RS04950 9c9dcd1c22ae0bad9b4446b8aee8750f 338 Gene3D G3DSA:3.90.870.10 1 207 4.3E-89 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CFF04554_RS04950 9c9dcd1c22ae0bad9b4446b8aee8750f 338 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 198 1.6E-73 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS04950 9c9dcd1c22ae0bad9b4446b8aee8750f 338 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 197 3.4E-78 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CFF04554_RS04400 372a137a5d30cf69746ea54937e45cc6 297 SUPERFAMILY SSF51730 2 266 5.1E-29 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CFF04554_RS04400 372a137a5d30cf69746ea54937e45cc6 297 Pfam PF02219 Methylenetetrahydrofolate reductase 127 252 2.4E-9 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CFF04554_RS04400 372a137a5d30cf69746ea54937e45cc6 297 Gene3D G3DSA:3.20.20.220 129 266 1.2E-14 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like CFF04554_RS00650 c916b3501f452b5244beb5854b90843f 211 PANTHER PTHR38601 1 211 3.2E-23 T 23-04-2016 CFF04554_RS00650 c916b3501f452b5244beb5854b90843f 211 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 124 204 4.5E-6 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CFF04554_RS00650 c916b3501f452b5244beb5854b90843f 211 PANTHER PTHR38601:SF1 1 211 3.2E-23 T 23-04-2016 CFF04554_RS00650 c916b3501f452b5244beb5854b90843f 211 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 15 187 7.0E-43 T 23-04-2016 CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 Gene3D G3DSA:3.40.50.2020 160 280 2.1E-51 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 309 48.097 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 SMART SM01400 4 120 3.0E-78 T 23-04-2016 CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 Pfam PF14572 Phosphoribosyl synthetase-associated domain 197 308 1.8E-26 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 SUPERFAMILY SSF53271 69 300 6.86E-67 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 1.9E-48 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 309 2.1E-123 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 Gene3D G3DSA:3.40.50.2020 1 159 6.0E-74 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07515 57872d036000f3ce51ceefdfb15614b3 309 PANTHER PTHR10210 1 309 5.6E-182 T 23-04-2016 CFF04554_RS02595 db1e899953e30d4c8a7d2f1ef9aa5248 173 PIRSF PIRSF017018 2 173 2.1E-70 T 23-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type CFF04554_RS02595 db1e899953e30d4c8a7d2f1ef9aa5248 173 Pfam PF10634 Fe2+ transport protein 19 169 1.4E-66 T 23-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type CFF04554_RS08110 b2e6c8443873b5f999e458dfa4ebbe97 301 Gene3D G3DSA:3.10.25.10 198 271 2.0E-6 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS08110 b2e6c8443873b5f999e458dfa4ebbe97 301 SUPERFAMILY SSF50486 198 272 8.63E-9 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CFF04554_RS08110 b2e6c8443873b5f999e458dfa4ebbe97 301 Gene3D G3DSA:3.40.50.170 3 177 1.2E-26 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS08110 b2e6c8443873b5f999e458dfa4ebbe97 301 Pfam PF00551 Formyl transferase 4 170 3.5E-12 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS08110 b2e6c8443873b5f999e458dfa4ebbe97 301 SUPERFAMILY SSF53328 3 174 3.53E-31 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS08110 b2e6c8443873b5f999e458dfa4ebbe97 301 PANTHER PTHR11138 2 242 3.2E-25 T 23-04-2016 CFF04554_RS08110 b2e6c8443873b5f999e458dfa4ebbe97 301 Pfam PF02911 Formyl transferase, C-terminal domain 198 271 3.9E-7 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 Pfam PF03129 Anticodon binding domain 325 408 1.2E-5 T 23-04-2016 IPR004154 Anticodon-binding CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 Gene3D G3DSA:3.30.930.10 3 181 1.4E-84 T 23-04-2016 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 Gene3D G3DSA:3.30.930.10 217 316 1.4E-84 T 23-04-2016 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 SUPERFAMILY SSF55681 2 315 2.59E-90 T 23-04-2016 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 PIRSF PIRSF001549 1 409 1.2E-109 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 401 4.5E-138 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 Gene3D G3DSA:3.40.50.800 324 407 7.0E-15 T 23-04-2016 IPR004154 Anticodon-binding CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 Pfam PF13393 Histidyl-tRNA synthetase 7 308 2.2E-42 T 23-04-2016 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 PANTHER PTHR11476:SF9 1 409 5.4E-160 T 23-04-2016 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 407 28.538 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 PANTHER PTHR11476 1 409 5.4E-160 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CFF04554_RS04475 56d623c8dc57172628357d97af9ddefd 409 SUPERFAMILY SSF52954 324 408 1.01E-13 T 23-04-2016 IPR004154 Anticodon-binding CFF04554_RS03815 e0a11224be1262512f0d7a7c7dd47090 432 Pfam PF02321 Outer membrane efflux protein 254 429 2.0E-20 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CFF04554_RS03815 e0a11224be1262512f0d7a7c7dd47090 432 Pfam PF02321 Outer membrane efflux protein 44 219 1.0E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CFF04554_RS03815 e0a11224be1262512f0d7a7c7dd47090 432 SUPERFAMILY SSF56954 4 430 8.5E-65 T 23-04-2016 CFF04554_RS03815 e0a11224be1262512f0d7a7c7dd47090 432 PANTHER PTHR30203 32 431 2.4E-57 T 23-04-2016 CFF04554_RS03815 e0a11224be1262512f0d7a7c7dd47090 432 Gene3D G3DSA:1.20.1600.10 34 430 1.3E-58 T 23-04-2016 CFF04554_RS03815 e0a11224be1262512f0d7a7c7dd47090 432 PANTHER PTHR30203:SF13 32 431 2.4E-57 T 23-04-2016 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 PANTHER PTHR22976:SF29 1 348 7.2E-164 T 23-04-2016 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 SUPERFAMILY SSF102114 3 332 1.29E-51 T 23-04-2016 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 PANTHER PTHR22976 1 348 7.2E-164 T 23-04-2016 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 1 348 52.754 T 23-04-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 2 345 6.4E-154 T 23-04-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 SMART SM00729 42 266 0.0045 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 Gene3D G3DSA:3.20.20.70 3 332 9.8E-60 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 PIRSF PIRSF004762 1 347 1.1E-104 T 23-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 Pfam PF04055 Radical SAM superfamily 46 216 3.4E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS04020 32d9134dac0e11e90be7ca64a00c65c2 348 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 39 345 1.5E-130 T 23-04-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 CFF04554_RS03725 154672eb963b4a687ebc0be32a601d0d 159 SMART SM00881 31 124 3.0E-20 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CFF04554_RS03725 154672eb963b4a687ebc0be32a601d0d 159 PANTHER PTHR33303 26 150 1.6E-38 T 23-04-2016 CFF04554_RS03725 154672eb963b4a687ebc0be32a601d0d 159 Gene3D G3DSA:3.40.50.720 26 153 3.4E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03725 154672eb963b4a687ebc0be32a601d0d 159 SUPERFAMILY SSF51735 27 150 1.44E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS03725 154672eb963b4a687ebc0be32a601d0d 159 Pfam PF13380 CoA binding domain 36 150 1.1E-34 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CFF04554_RS05780 f5c41458b010c8dc95119c6974d6ec15 346 SMART SM00729 3 214 4.4E-36 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CFF04554_RS05780 f5c41458b010c8dc95119c6974d6ec15 346 PANTHER PTHR13932:SF5 1 335 8.2E-87 T 23-04-2016 CFF04554_RS05780 f5c41458b010c8dc95119c6974d6ec15 346 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 2 341 1.5E-93 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- CFF04554_RS05780 f5c41458b010c8dc95119c6974d6ec15 346 Gene3D G3DSA:3.80.30.20 3 224 8.3E-30 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS05780 f5c41458b010c8dc95119c6974d6ec15 346 SUPERFAMILY SSF102114 3 331 4.19E-77 T 23-04-2016 CFF04554_RS05780 f5c41458b010c8dc95119c6974d6ec15 346 Pfam PF04055 Radical SAM superfamily 5 157 4.7E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CFF04554_RS05780 f5c41458b010c8dc95119c6974d6ec15 346 PANTHER PTHR13932 1 335 8.2E-87 T 23-04-2016 CFF04554_RS05710 dc68e104039891a4bc390c11815f6135 561 Gene3D G3DSA:3.30.420.10 465 556 6.6E-12 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS05710 dc68e104039891a4bc390c11815f6135 561 Pfam PF00665 Integrase core domain 422 555 1.2E-10 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 CFF04554_RS05710 dc68e104039891a4bc390c11815f6135 561 SUPERFAMILY SSF53098 468 556 1.52E-10 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS03060 9aec1c3acd7771fa44a47396bf90ca1a 338 PANTHER PTHR22893 1 325 3.9E-106 T 23-04-2016 CFF04554_RS03060 9aec1c3acd7771fa44a47396bf90ca1a 338 PANTHER PTHR22893:SF7 1 325 3.9E-106 T 23-04-2016 CFF04554_RS03060 9aec1c3acd7771fa44a47396bf90ca1a 338 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 317 5.9E-67 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CFF04554_RS03060 9aec1c3acd7771fa44a47396bf90ca1a 338 Gene3D G3DSA:3.20.20.70 1 326 1.2E-100 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS03060 9aec1c3acd7771fa44a47396bf90ca1a 338 SUPERFAMILY SSF51395 1 328 7.94E-94 T 23-04-2016 CFF04554_RS01040 8844c854b749816dd7b5d68eb715608d 247 Pfam PF01148 Cytidylyltransferase family 2 246 1.1E-46 T 23-04-2016 CFF04554_RS01040 8844c854b749816dd7b5d68eb715608d 247 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 207 233 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 CFF04554_RS01040 8844c854b749816dd7b5d68eb715608d 247 PANTHER PTHR13773:SF0 2 247 1.6E-39 T 23-04-2016 CFF04554_RS01040 8844c854b749816dd7b5d68eb715608d 247 PANTHER PTHR13773 2 247 1.6E-39 T 23-04-2016 CFF04554_RS01465 ba6956aec5e430b3ffd8d1c019ba5541 112 Pfam PF02021 Uncharacterised protein family UPF0102 12 99 3.4E-22 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 CFF04554_RS01465 ba6956aec5e430b3ffd8d1c019ba5541 112 SUPERFAMILY SSF52980 11 107 8.9E-27 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CFF04554_RS01465 ba6956aec5e430b3ffd8d1c019ba5541 112 PANTHER PTHR34039 1 110 6.9E-22 T 23-04-2016 CFF04554_RS01465 ba6956aec5e430b3ffd8d1c019ba5541 112 PANTHER PTHR34039:SF1 1 110 6.9E-22 T 23-04-2016 CFF04554_RS01465 ba6956aec5e430b3ffd8d1c019ba5541 112 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 112 18.368 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 CFF04554_RS01465 ba6956aec5e430b3ffd8d1c019ba5541 112 Gene3D G3DSA:3.40.1350.10 12 110 1.1E-26 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CFF04554_RS03210 d31ce909f3bd817a24e52ad3174a4328 241 PANTHER PTHR13504 2 211 1.6E-24 T 23-04-2016 CFF04554_RS03210 d31ce909f3bd817a24e52ad3174a4328 241 SUPERFAMILY SSF140931 53 232 4.71E-31 T 23-04-2016 IPR003812 Fido domain CFF04554_RS03210 d31ce909f3bd817a24e52ad3174a4328 241 Gene3D G3DSA:1.10.3290.10 11 232 7.1E-46 T 23-04-2016 IPR003812 Fido domain CFF04554_RS03210 d31ce909f3bd817a24e52ad3174a4328 241 Pfam PF02661 Fic/DOC family 78 174 3.4E-17 T 23-04-2016 IPR003812 Fido domain CFF04554_RS06905 19c226a8fe650462f14daa54a093bdc8 301 Gene3D G3DSA:3.30.450.20 40 138 1.5E-19 T 23-04-2016 CFF04554_RS06905 19c226a8fe650462f14daa54a093bdc8 301 SUPERFAMILY SSF103190 5 147 2.04E-21 T 23-04-2016 IPR029151 Periplasmic sensor domain-like CFF04554_RS07070 924b0f07c4d8a0b57f13b35d7ef39276 504 Pfam PF01943 Polysaccharide biosynthesis protein 5 285 1.2E-7 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CFF04554_RS05920 db0a44f952e83b8be9b4fb4df96ff2ab 95 SUPERFAMILY SSF141000 2 93 8.76E-24 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CFF04554_RS05920 db0a44f952e83b8be9b4fb4df96ff2ab 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 3.4E-22 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CFF04554_RS05920 db0a44f952e83b8be9b4fb4df96ff2ab 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 19.887 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CFF04554_RS05920 db0a44f952e83b8be9b4fb4df96ff2ab 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 1.6E-15 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CFF04554_RS05920 db0a44f952e83b8be9b4fb4df96ff2ab 95 PANTHER PTHR15004:SF0 1 95 7.2E-22 T 23-04-2016 CFF04554_RS05920 db0a44f952e83b8be9b4fb4df96ff2ab 95 PANTHER PTHR15004 1 95 7.2E-22 T 23-04-2016 CFF04554_RS07490 c346a78df249de1549abbccc97674244 189 Gene3D G3DSA:3.40.50.2020 79 185 4.8E-10 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07490 c346a78df249de1549abbccc97674244 189 SUPERFAMILY SSF53271 50 187 1.33E-14 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07580 41107cd12f98fe3167200f535ee9408c 68 Gene3D G3DSA:1.10.10.700 2 36 5.0E-5 T 23-04-2016 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 100 217 3.2E-31 T 23-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 Gene3D G3DSA:3.40.50.150 9 220 1.4E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 240 609 4.1E-72 T 23-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 PANTHER PTHR13847:SF182 550 609 2.1E-26 T 23-04-2016 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 PANTHER PTHR13847:SF182 199 530 2.1E-26 T 23-04-2016 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 Gene3D G3DSA:3.50.50.60 239 318 7.6E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 Gene3D G3DSA:3.50.50.60 353 430 7.6E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 Gene3D G3DSA:3.50.50.60 516 601 7.6E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 4 604 19.307 T 23-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 PANTHER PTHR13847 550 609 2.1E-26 T 23-04-2016 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 PANTHER PTHR13847 199 530 2.1E-26 T 23-04-2016 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 SUPERFAMILY SSF51905 204 293 1.36E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 SUPERFAMILY SSF51905 338 443 1.36E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CFF04554_RS06230 ec2967c8cb417c116f9bd33446ba4248 612 Pfam PF01266 FAD dependent oxidoreductase 240 578 9.6E-22 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CFF04554_RS07400 ddad1e187677c28fdcc1100efcae5c21 297 PANTHER PTHR30349 36 279 9.4E-26 T 23-04-2016 CFF04554_RS07400 ddad1e187677c28fdcc1100efcae5c21 297 Gene3D G3DSA:1.10.150.130 6 104 1.5E-13 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal CFF04554_RS07400 ddad1e187677c28fdcc1100efcae5c21 297 Pfam PF00589 Phage integrase family 139 281 3.2E-17 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CFF04554_RS07400 ddad1e187677c28fdcc1100efcae5c21 297 PANTHER PTHR30349:SF20 36 279 9.4E-26 T 23-04-2016 CFF04554_RS07400 ddad1e187677c28fdcc1100efcae5c21 297 Gene3D G3DSA:1.10.443.10 119 282 4.6E-25 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CFF04554_RS07400 ddad1e187677c28fdcc1100efcae5c21 297 SUPERFAMILY SSF56349 5 280 4.12E-44 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CFF04554_RS06005 af0dab234acca813c137f34ccf4fce91 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 19 116 1.2E-28 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CFF04554_RS06005 af0dab234acca813c137f34ccf4fce91 229 SUPERFAMILY SSF161098 19 208 1.57E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS06005 af0dab234acca813c137f34ccf4fce91 229 PANTHER PTHR30614 9 227 6.4E-74 T 23-04-2016 CFF04554_RS06005 af0dab234acca813c137f34ccf4fce91 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 221 4.2E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS06005 af0dab234acca813c137f34ccf4fce91 229 Gene3D G3DSA:1.10.3720.10 17 222 4.1E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 SUPERFAMILY SSF56219 21 259 9.03E-32 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 Gene3D G3DSA:3.60.10.10 8 263 4.1E-108 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 24 197 3.2E-11 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 PIRSF PIRSF018539 1 264 1.4E-120 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 PRINTS PR01388 Cytolethal distending toxin B signature 59 79 2.3E-56 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 PRINTS PR01388 Cytolethal distending toxin B signature 179 194 2.3E-56 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 PRINTS PR01388 Cytolethal distending toxin B signature 93 111 2.3E-56 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 PRINTS PR01388 Cytolethal distending toxin B signature 243 259 2.3E-56 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 PRINTS PR01388 Cytolethal distending toxin B signature 18 39 2.3E-56 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS04775 98b81f16f9b4ab5a7042986fcbe740c6 264 PRINTS PR01388 Cytolethal distending toxin B signature 136 155 2.3E-56 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CFF04554_RS05285 57b5487cb68703be03ec385bd4017201 128 Gene3D G3DSA:2.30.290.10 3 114 1.3E-30 T 23-04-2016 IPR024046 Flagellar assembly factor FliW domain CFF04554_RS05285 57b5487cb68703be03ec385bd4017201 128 SUPERFAMILY SSF141457 3 121 1.44E-30 T 23-04-2016 IPR024046 Flagellar assembly factor FliW domain CFF04554_RS05285 57b5487cb68703be03ec385bd4017201 128 Pfam PF02623 FliW protein 4 114 2.4E-25 T 23-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 CFF04554_RS05285 57b5487cb68703be03ec385bd4017201 128 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 1 120 18.343 T 23-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 CFF04554_RS05965 fd7e9e9c1201edba8743c55644e9447b 111 Pfam PF03927 NapD protein 1 74 5.9E-20 T 23-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly CFF04554_RS09095 9c1841a2b0001a2355da0bc977463eec 179 SUPERFAMILY SSF53167 15 174 6.81E-22 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CFF04554_RS09095 9c1841a2b0001a2355da0bc977463eec 179 Gene3D G3DSA:3.40.50.1580 15 173 1.9E-13 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CFF04554_RS09095 9c1841a2b0001a2355da0bc977463eec 179 Pfam PF01048 Phosphorylase superfamily 17 174 6.2E-9 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CFF04554_RS08100 3c4c4f72df103fc64eaf4f1335aaacef 423 Pfam PF08484 C-methyltransferase C-terminal domain 262 410 2.2E-28 T 23-04-2016 IPR013691 C-methyltransferase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 CFF04554_RS08100 3c4c4f72df103fc64eaf4f1335aaacef 423 SUPERFAMILY SSF53335 68 270 7.69E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08100 3c4c4f72df103fc64eaf4f1335aaacef 423 Pfam PF13489 Methyltransferase domain 99 253 9.4E-15 T 23-04-2016 CFF04554_RS08100 3c4c4f72df103fc64eaf4f1335aaacef 423 Pfam PF08421 Putative zinc binding domain 11 62 2.3E-6 T 23-04-2016 IPR013630 Methyltransferase putative zinc binding domain KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 CFF04554_RS08100 3c4c4f72df103fc64eaf4f1335aaacef 423 Gene3D G3DSA:3.40.50.150 94 275 3.9E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS07160 f1d6b3ff7e77532ff09fe5d4aa08d917 306 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 230 280 3.2E-9 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CFF04554_RS07160 f1d6b3ff7e77532ff09fe5d4aa08d917 306 PANTHER PTHR30160 1 280 6.2E-37 T 23-04-2016 CFF04554_RS07160 f1d6b3ff7e77532ff09fe5d4aa08d917 306 PANTHER PTHR30160:SF1 1 280 6.2E-37 T 23-04-2016 CFF04554_RS07160 f1d6b3ff7e77532ff09fe5d4aa08d917 306 Gene3D G3DSA:3.40.50.2000 168 302 5.4E-15 T 23-04-2016 CFF04554_RS07160 f1d6b3ff7e77532ff09fe5d4aa08d917 306 Gene3D G3DSA:3.40.50.2000 1 151 5.9E-24 T 23-04-2016 CFF04554_RS07160 f1d6b3ff7e77532ff09fe5d4aa08d917 306 SUPERFAMILY SSF53756 1 305 1.36E-46 T 23-04-2016 CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 Pfam PF00557 Metallopeptidase family M24 12 234 6.2E-43 T 23-04-2016 IPR000994 Peptidase M24, structural domain CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 68 81 5.5E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 160 172 5.5E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 5.5E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 5.5E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 Gene3D G3DSA:3.90.230.10 3 251 1.9E-75 T 23-04-2016 IPR000994 Peptidase M24, structural domain CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 251 1.5E-93 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 166 184 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 PANTHER PTHR10804:SF41 1 252 1.5E-84 T 23-04-2016 CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 SUPERFAMILY SSF55920 4 250 4.45E-73 T 23-04-2016 IPR000994 Peptidase M24, structural domain CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 PANTHER PTHR10804 1 252 1.5E-84 T 23-04-2016 CFF04554_RS00265 201520935b26bba819f362940c9ebddc 252 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 35.915 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CFF04554_RS01520 ec5b6a4d67f1e62ae5aa339058c7c67f 86 Gene3D G3DSA:1.10.260.40 20 85 1.4E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CFF04554_RS01520 ec5b6a4d67f1e62ae5aa339058c7c67f 86 Pfam PF01381 Helix-turn-helix 25 81 4.2E-10 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CFF04554_RS01520 ec5b6a4d67f1e62ae5aa339058c7c67f 86 SMART SM00530 23 81 4.9E-8 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CFF04554_RS01520 ec5b6a4d67f1e62ae5aa339058c7c67f 86 SUPERFAMILY SSF47413 17 84 2.53E-12 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CFF04554_RS03945 ce7fe9895e33997a18d502270ee32aee 352 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 85 104 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 CFF04554_RS03945 ce7fe9895e33997a18d502270ee32aee 352 SUPERFAMILY SSF51395 2 350 6.72E-94 T 23-04-2016 CFF04554_RS03945 ce7fe9895e33997a18d502270ee32aee 352 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 286 306 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 CFF04554_RS03945 ce7fe9895e33997a18d502270ee32aee 352 Gene3D G3DSA:3.20.20.70 6 351 1.2E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS03945 ce7fe9895e33997a18d502270ee32aee 352 Pfam PF01180 Dihydroorotate dehydrogenase 50 334 3.0E-76 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CFF04554_RS03945 ce7fe9895e33997a18d502270ee32aee 352 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 351 1.1E-119 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CFF04554_RS03945 ce7fe9895e33997a18d502270ee32aee 352 PIRSF PIRSF000164 16 351 1.2E-99 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 CFF04554_RS03945 ce7fe9895e33997a18d502270ee32aee 352 PANTHER PTHR11938 5 351 2.3E-62 T 23-04-2016 CFF04554_RS07290 6899cc7c920458688c40891092c5c75c 105 PANTHER PTHR21043 5 99 5.8E-22 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CFF04554_RS07290 6899cc7c920458688c40891092c5c75c 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 5 99 5.3E-27 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CFF04554_RS07290 6899cc7c920458688c40891092c5c75c 105 Gene3D G3DSA:3.30.460.10 2 100 1.5E-26 T 23-04-2016 CFF04554_RS07290 6899cc7c920458688c40891092c5c75c 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 101 18.477 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CFF04554_RS07290 6899cc7c920458688c40891092c5c75c 105 Pfam PF02410 Ribosomal silencing factor during starvation 6 99 2.8E-22 T 23-04-2016 CFF04554_RS07290 6899cc7c920458688c40891092c5c75c 105 SUPERFAMILY SSF81301 2 99 3.6E-26 T 23-04-2016 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 502 614 6.0E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 SMART SM00387 498 616 3.7E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 SMART SM00388 386 451 1.2E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 SUPERFAMILY SSF55874 440 614 3.8E-40 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 SUPERFAMILY SSF52172 748 868 6.64E-11 T 23-04-2016 IPR011006 CheY-like superfamily CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 Gene3D G3DSA:3.40.50.2300 906 1014 2.5E-4 T 23-04-2016 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PANTHER PTHR24423 8 15 5.7E-89 T 23-04-2016 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PANTHER PTHR24423 365 619 5.7E-89 T 23-04-2016 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PANTHER PTHR24423 716 912 5.7E-89 T 23-04-2016 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 Gene3D G3DSA:3.30.565.10 471 674 3.1E-41 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 Pfam PF00512 His Kinase A (phospho-acceptor) domain 386 450 5.7E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 SUPERFAMILY SSF47384 374 452 3.34E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PANTHER PTHR24423:SF382 8 15 5.7E-89 T 23-04-2016 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PANTHER PTHR24423:SF382 365 619 5.7E-89 T 23-04-2016 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PANTHER PTHR24423:SF382 716 912 5.7E-89 T 23-04-2016 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 555 4.6E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 594 4.6E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 613 4.6E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 569 4.6E-12 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 Pfam PF08376 Nitrate and nitrite sensing 56 289 1.2E-9 T 23-04-2016 IPR013587 Nitrate/nitrite sensing protein CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 Gene3D G3DSA:1.10.287.130 382 447 1.3E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 Gene3D G3DSA:3.40.50.2300 748 871 3.1E-13 T 23-04-2016 CFF04554_RS06525 b214d3072b2b306ca1d8d0320f565d9e 1016 Pfam PF00072 Response regulator receiver domain 758 865 1.4E-7 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CFF04554_RS04115 e568a43df4569a6d6745b73b4a875bf4 202 PANTHER PTHR30353:SF13 2 201 8.3E-61 T 23-04-2016 CFF04554_RS04115 e568a43df4569a6d6745b73b4a875bf4 202 Pfam PF09335 SNARE associated Golgi protein 34 160 3.2E-19 T 23-04-2016 IPR032816 SNARE associated Golgi protein CFF04554_RS04115 e568a43df4569a6d6745b73b4a875bf4 202 PANTHER PTHR30353 2 201 8.3E-61 T 23-04-2016 IPR032818 DedA family CFF04554_RS07375 3dd1bfb54a0bfb370f5f9d2e6630ed91 415 Pfam PF00033 Cytochrome b/b6/petB 31 215 8.4E-58 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CFF04554_RS07375 3dd1bfb54a0bfb370f5f9d2e6630ed91 415 PANTHER PTHR19271 7 411 8.7E-113 T 23-04-2016 CFF04554_RS07375 3dd1bfb54a0bfb370f5f9d2e6630ed91 415 SUPERFAMILY SSF81648 241 388 1.27E-33 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 CFF04554_RS07375 3dd1bfb54a0bfb370f5f9d2e6630ed91 415 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 395 1.2E-25 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 CFF04554_RS07375 3dd1bfb54a0bfb370f5f9d2e6630ed91 415 SUPERFAMILY SSF81342 12 289 5.65E-80 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CFF04554_RS07375 3dd1bfb54a0bfb370f5f9d2e6630ed91 415 Gene3D G3DSA:1.20.810.10 12 413 3.7E-125 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain CFF04554_RS02415 25e43d3a68a76d8b08a412090b53c0fb 462 SUPERFAMILY SSF52540 15 172 1.42E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02415 25e43d3a68a76d8b08a412090b53c0fb 462 PANTHER PTHR33295:SF8 22 403 4.4E-92 T 23-04-2016 CFF04554_RS02415 25e43d3a68a76d8b08a412090b53c0fb 462 Gene3D G3DSA:3.40.50.300 14 156 6.7E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02415 25e43d3a68a76d8b08a412090b53c0fb 462 PANTHER PTHR33295 22 403 4.4E-92 T 23-04-2016 CFF04554_RS02415 25e43d3a68a76d8b08a412090b53c0fb 462 Pfam PF13635 Domain of unknown function (DUF4143) 241 367 8.0E-12 T 23-04-2016 IPR025420 Domain of unknown function DUF4143 CFF04554_RS02415 25e43d3a68a76d8b08a412090b53c0fb 462 Pfam PF13173 AAA domain 35 169 9.7E-34 T 23-04-2016 CFF04554_RS02240 e48bd12d2fc8f4f87fa2c06994d98c81 275 Pfam PF12679 ABC-2 family transporter protein 6 274 7.6E-27 T 23-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 CFF04554_RS02240 e48bd12d2fc8f4f87fa2c06994d98c81 275 PANTHER PTHR30294 245 275 4.5E-19 T 23-04-2016 CFF04554_RS02240 e48bd12d2fc8f4f87fa2c06994d98c81 275 PANTHER PTHR30294 1 229 4.5E-19 T 23-04-2016 CFF04554_RS00730 453a6726cadacd1f4d5c55dce812f82e 557 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 16 310 6.0E-102 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CFF04554_RS00730 453a6726cadacd1f4d5c55dce812f82e 557 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 368 487 2.6E-37 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CFF04554_RS00730 453a6726cadacd1f4d5c55dce812f82e 557 PANTHER PTHR36106 13 271 1.5E-232 T 23-04-2016 CFF04554_RS00730 453a6726cadacd1f4d5c55dce812f82e 557 PANTHER PTHR36106 378 555 1.5E-232 T 23-04-2016 CFF04554_RS00730 453a6726cadacd1f4d5c55dce812f82e 557 PANTHER PTHR36106 342 347 1.5E-232 T 23-04-2016 CFF04554_RS00730 453a6726cadacd1f4d5c55dce812f82e 557 PANTHER PTHR36106:SF3 13 271 1.5E-232 T 23-04-2016 CFF04554_RS00730 453a6726cadacd1f4d5c55dce812f82e 557 PANTHER PTHR36106:SF3 378 555 1.5E-232 T 23-04-2016 CFF04554_RS00730 453a6726cadacd1f4d5c55dce812f82e 557 PANTHER PTHR36106:SF3 342 347 1.5E-232 T 23-04-2016 CFF04554_RS06755 10a12b846299b3c244a662021d753ac6 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 11.565 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE CFF04554_RS06755 10a12b846299b3c244a662021d753ac6 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 4 57 8.4E-15 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CFF04554_RS06755 10a12b846299b3c244a662021d753ac6 59 Gene3D G3DSA:1.20.5.1030 1 58 1.1E-17 T 23-04-2016 CFF04554_RS06755 10a12b846299b3c244a662021d753ac6 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 57 6.0E-13 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 SMART SM00881 4 100 5.3E-30 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 8.1E-27 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 8.1E-27 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 8.1E-27 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 8.1E-27 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 Pfam PF00549 CoA-ligase 153 272 1.0E-12 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 PIRSF PIRSF001553 1 290 3.0E-118 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 Pfam PF02629 CoA binding domain 6 99 1.6E-25 T 23-04-2016 IPR003781 CoA-binding GO:0048037 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 Gene3D G3DSA:3.40.50.261 120 288 2.8E-60 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 Gene3D G3DSA:3.40.50.720 2 119 7.6E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 7.4E-120 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 SUPERFAMILY SSF52210 123 288 7.46E-43 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 SUPERFAMILY SSF51735 1 122 6.06E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS04550 1eec7d05c516fd6526370fbf8ac4e1b4 290 PANTHER PTHR11117 1 289 1.8E-145 T 23-04-2016 CFF04554_RS00505 4a785c2045850890804b1226c423e85c 258 Pfam PF09674 Protein of unknown function (DUF2400) 27 244 6.5E-59 T 23-04-2016 IPR014127 Conserved hypothetical protein CHP02757 CFF04554_RS00505 4a785c2045850890804b1226c423e85c 258 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 25 246 9.6E-68 T 23-04-2016 IPR014127 Conserved hypothetical protein CHP02757 CFF04554_RS05340 4f020324ea42a67e3b3a36cc3ca53048 314 PANTHER PTHR30160:SF13 19 313 2.0E-15 T 23-04-2016 CFF04554_RS05340 4f020324ea42a67e3b3a36cc3ca53048 314 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 25 202 3.6E-30 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CFF04554_RS05340 4f020324ea42a67e3b3a36cc3ca53048 314 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 216 304 2.6E-10 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CFF04554_RS05340 4f020324ea42a67e3b3a36cc3ca53048 314 PANTHER PTHR30160 19 313 2.0E-15 T 23-04-2016 CFF04554_RS05340 4f020324ea42a67e3b3a36cc3ca53048 314 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 9 309 20.545 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CFF04554_RS07635 8888acc984ac7adca8185c8e5f698fbf 276 Gene3D G3DSA:3.40.50.720 1 174 1.9E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07635 8888acc984ac7adca8185c8e5f698fbf 276 PANTHER PTHR21363 1 276 2.6E-59 T 23-04-2016 CFF04554_RS07635 8888acc984ac7adca8185c8e5f698fbf 276 SUPERFAMILY SSF48179 168 276 4.31E-32 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CFF04554_RS07635 8888acc984ac7adca8185c8e5f698fbf 276 SUPERFAMILY SSF51735 2 165 1.23E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS07635 8888acc984ac7adca8185c8e5f698fbf 276 PANTHER PTHR21363:SF0 1 276 2.6E-59 T 23-04-2016 CFF04554_RS07635 8888acc984ac7adca8185c8e5f698fbf 276 Pfam PF02153 Prephenate dehydrogenase 15 267 1.7E-73 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 SUPERFAMILY SSF51735 2 142 7.77E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 2 141 7.1E-40 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 SUPERFAMILY SSF56327 142 299 1.64E-29 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 145 297 2.2E-10 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 PANTHER PTHR11540:SF16 2 298 2.7E-77 T 23-04-2016 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 PIRSF PIRSF000102 1 303 1.0E-80 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 Gene3D G3DSA:3.90.110.10 143 298 1.0E-27 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 Gene3D G3DSA:3.40.50.720 2 142 2.1E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 PANTHER PTHR11540 2 298 2.7E-77 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 1.5E-26 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 PRINTS PR00086 L-lactate dehydrogenase signature 139 157 1.5E-26 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 1.5E-26 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CFF04554_RS04560 59592f198bee80fd6d440c237c397164 306 PRINTS PR00086 L-lactate dehydrogenase signature 115 135 1.5E-26 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 TIGRFAM TIGR00260 thrC: threonine synthase 69 425 6.4E-81 T 23-04-2016 IPR004450 Threonine synthase-like CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 Gene3D G3DSA:3.40.50.1100 203 431 1.0E-74 T 23-04-2016 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 Gene3D G3DSA:3.90.1380.10 5 86 3.0E-15 T 23-04-2016 IPR029144 Threonine synthase, N-terminal CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 398 6.8E-16 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 SUPERFAMILY SSF53686 14 477 2.56E-123 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 Gene3D G3DSA:3.40.50.1100 122 202 1.5E-6 T 23-04-2016 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 PANTHER PTHR10314 56 336 6.8E-80 T 23-04-2016 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 PANTHER PTHR10314 28 39 6.8E-80 T 23-04-2016 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 PANTHER PTHR10314 366 466 6.8E-80 T 23-04-2016 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 PANTHER PTHR10314:SF1 56 336 6.8E-80 T 23-04-2016 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 PANTHER PTHR10314:SF1 28 39 6.8E-80 T 23-04-2016 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 PANTHER PTHR10314:SF1 366 466 6.8E-80 T 23-04-2016 CFF04554_RS05350 81e8667157092adc7a2008aabac517c7 479 Pfam PF14821 Threonine synthase N terminus 14 79 1.7E-10 T 23-04-2016 IPR029144 Threonine synthase, N-terminal CFF04554_RS02165 8522842675a001ab0f561495c7b2337e 229 PANTHER PTHR35891:SF1 1 229 2.0E-65 T 23-04-2016 CFF04554_RS02165 8522842675a001ab0f561495c7b2337e 229 PANTHER PTHR35891 1 229 2.0E-65 T 23-04-2016 CFF04554_RS02165 8522842675a001ab0f561495c7b2337e 229 SUPERFAMILY SSF52833 24 225 6.58E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS02165 8522842675a001ab0f561495c7b2337e 229 Pfam PF01323 DSBA-like thioredoxin domain 48 222 1.3E-6 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 CFF04554_RS02165 8522842675a001ab0f561495c7b2337e 229 Gene3D G3DSA:3.40.30.10 141 228 5.7E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS02165 8522842675a001ab0f561495c7b2337e 229 Gene3D G3DSA:3.40.30.10 6 132 5.7E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS02910 e248aaeaa91d65724ea6c814b619125a 405 PANTHER PTHR30574 6 356 6.6E-143 T 23-04-2016 CFF04554_RS02910 e248aaeaa91d65724ea6c814b619125a 405 Pfam PF04143 Sulphur transport 7 162 1.4E-24 T 23-04-2016 IPR007272 Sulphur transport domain CFF04554_RS02910 e248aaeaa91d65724ea6c814b619125a 405 Pfam PF04143 Sulphur transport 249 397 8.7E-18 T 23-04-2016 IPR007272 Sulphur transport domain CFF04554_RS02910 e248aaeaa91d65724ea6c814b619125a 405 PANTHER PTHR30574:SF6 6 356 6.6E-143 T 23-04-2016 CFF04554_RS08395 563ae5dd00f82bc0c63b167836185fa9 180 Gene3D G3DSA:3.40.50.1950 2 180 3.2E-66 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CFF04554_RS08395 563ae5dd00f82bc0c63b167836185fa9 180 PANTHER PTHR30108 2 180 1.3E-56 T 23-04-2016 CFF04554_RS08395 563ae5dd00f82bc0c63b167836185fa9 180 SUPERFAMILY SSF52507 3 180 5.1E-47 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CFF04554_RS08395 563ae5dd00f82bc0c63b167836185fa9 180 PANTHER PTHR30108:SF2 2 180 1.3E-56 T 23-04-2016 CFF04554_RS08395 563ae5dd00f82bc0c63b167836185fa9 180 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 179 3.2E-49 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 CFF04554_RS08395 563ae5dd00f82bc0c63b167836185fa9 180 Pfam PF02441 Flavoprotein 2 122 1.8E-23 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 CFF04554_RS05090 77ec969e9160400e6e4cb7e71c75050f 306 Pfam PF03547 Membrane transport protein 159 300 3.2E-13 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CFF04554_RS05090 77ec969e9160400e6e4cb7e71c75050f 306 PANTHER PTHR31752 87 305 5.8E-32 T 23-04-2016 CFF04554_RS05090 77ec969e9160400e6e4cb7e71c75050f 306 PANTHER PTHR31752:SF13 87 305 5.8E-32 T 23-04-2016 CFF04554_RS07890 63cccafbe0e97a56ea2f902dddc30491 267 Gene3D G3DSA:3.30.470.20 18 199 3.5E-21 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS07890 63cccafbe0e97a56ea2f902dddc30491 267 SUPERFAMILY SSF56059 18 182 6.87E-27 T 23-04-2016 CFF04554_RS07890 63cccafbe0e97a56ea2f902dddc30491 267 Pfam PF13535 ATP-grasp domain 19 152 5.7E-11 T 23-04-2016 CFF04554_RS07750 7c79ff436bc882cd62a2046f3d5f7bfd 199 Pfam PF01618 MotA/TolQ/ExbB proton channel family 75 178 1.9E-27 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CFF04554_RS07750 7c79ff436bc882cd62a2046f3d5f7bfd 199 PANTHER PTHR30625 97 189 1.9E-19 T 23-04-2016 CFF04554_RS08240 e5b91ee6ddc7255f262eb95d3f6eb3ea 754 Pfam PF00391 PEP-utilising enzyme, mobile domain 680 747 8.9E-11 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CFF04554_RS08240 e5b91ee6ddc7255f262eb95d3f6eb3ea 754 SUPERFAMILY SSF56059 47 205 1.41E-7 T 23-04-2016 CFF04554_RS08240 e5b91ee6ddc7255f262eb95d3f6eb3ea 754 Gene3D G3DSA:3.50.30.10 679 753 3.9E-12 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CFF04554_RS08240 e5b91ee6ddc7255f262eb95d3f6eb3ea 754 Gene3D G3DSA:3.30.1490.20 47 97 6.9E-5 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CFF04554_RS08240 e5b91ee6ddc7255f262eb95d3f6eb3ea 754 Gene3D G3DSA:3.30.470.20 157 205 3.4E-5 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CFF04554_RS08240 e5b91ee6ddc7255f262eb95d3f6eb3ea 754 SUPERFAMILY SSF52009 679 753 5.62E-14 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 PANTHER PTHR11088:SF25 6 271 3.4E-42 T 23-04-2016 CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 Pfam PF01715 IPP transferase 38 273 9.2E-42 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 SUPERFAMILY SSF52540 7 116 7.8E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 Gene3D G3DSA:3.40.50.300 5 160 6.5E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 PANTHER PTHR11088 6 271 3.4E-42 T 23-04-2016 CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 Gene3D G3DSA:1.10.287.890 190 272 8.7E-15 T 23-04-2016 CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 SUPERFAMILY SSF52540 6 36 2.22E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 SUPERFAMILY SSF52540 126 217 2.22E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 278 2.3E-58 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CFF04554_RS01080 76cbac5537d9516b822cad471d84ae83 300 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 295 19.261 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CFF04554_RS03640 b478def781f52eebfa6304de91012e01 271 Gene3D G3DSA:1.10.3470.10 53 260 1.3E-5 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS03640 b478def781f52eebfa6304de91012e01 271 PANTHER PTHR30477 2 271 4.7E-78 T 23-04-2016 CFF04554_RS03640 b478def781f52eebfa6304de91012e01 271 SUPERFAMILY SSF81345 5 263 9.02E-34 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS03640 b478def781f52eebfa6304de91012e01 271 Pfam PF00950 ABC 3 transport family 11 265 3.2E-64 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 CFF04554_RS03640 b478def781f52eebfa6304de91012e01 271 PANTHER PTHR30477:SF13 2 271 4.7E-78 T 23-04-2016 CFF04554_RS08010 a9bd82c1d4e7a3d9ac130f2006e2297e 64 Gene3D G3DSA:3.30.60.20 36 60 4.7E-4 T 23-04-2016 CFF04554_RS07155 754d1aadfe89681d30de354ca791ded5 351 Pfam PF00534 Glycosyl transferases group 1 167 325 1.6E-34 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07155 754d1aadfe89681d30de354ca791ded5 351 Pfam PF13439 Glycosyltransferase Family 4 13 157 8.2E-10 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07155 754d1aadfe89681d30de354ca791ded5 351 Gene3D G3DSA:3.40.50.2000 144 325 7.5E-30 T 23-04-2016 CFF04554_RS07155 754d1aadfe89681d30de354ca791ded5 351 PANTHER PTHR12526 118 350 7.6E-58 T 23-04-2016 CFF04554_RS07155 754d1aadfe89681d30de354ca791ded5 351 SUPERFAMILY SSF53756 3 349 1.3E-71 T 23-04-2016 CFF04554_RS07240 f93fa5d6feb34c26cdc5fefba37d9c08 537 PANTHER PTHR11669 3 379 4.3E-135 T 23-04-2016 CFF04554_RS07240 f93fa5d6feb34c26cdc5fefba37d9c08 537 Gene3D G3DSA:1.10.8.60 165 241 2.6E-28 T 23-04-2016 CFF04554_RS07240 f93fa5d6feb34c26cdc5fefba37d9c08 537 PANTHER PTHR11669:SF0 3 379 4.3E-135 T 23-04-2016 CFF04554_RS07240 f93fa5d6feb34c26cdc5fefba37d9c08 537 Gene3D G3DSA:3.40.50.300 13 164 2.5E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07240 f93fa5d6feb34c26cdc5fefba37d9c08 537 SUPERFAMILY SSF52540 31 224 9.52E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07240 f93fa5d6feb34c26cdc5fefba37d9c08 537 Pfam PF13177 DNA polymerase III, delta subunit 19 176 4.4E-46 T 23-04-2016 CFF04554_RS07240 f93fa5d6feb34c26cdc5fefba37d9c08 537 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 296 1.7E-121 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CFF04554_RS07240 f93fa5d6feb34c26cdc5fefba37d9c08 537 SMART SM00382 35 177 2.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS04320 f2041acf1c7bd84897636022df830fef 213 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CFF04554_RS04320 f2041acf1c7bd84897636022df830fef 213 Gene3D G3DSA:3.20.20.70 2 212 2.5E-82 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS04320 f2041acf1c7bd84897636022df830fef 213 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CFF04554_RS04320 f2041acf1c7bd84897636022df830fef 213 PANTHER PTHR11749 1 212 1.1E-99 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CFF04554_RS04320 f2041acf1c7bd84897636022df830fef 213 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 4.7E-79 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CFF04554_RS04320 f2041acf1c7bd84897636022df830fef 213 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 212 4.0E-89 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CFF04554_RS04320 f2041acf1c7bd84897636022df830fef 213 SUPERFAMILY SSF51366 2 212 3.1E-66 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CFF04554_RS04320 f2041acf1c7bd84897636022df830fef 213 PIRSF PIRSF001461 1 213 1.0E-89 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CFF04554_RS04415 15276c6e03352ef520d648ed60a5aab6 267 PANTHER PTHR21496:SF10 73 265 3.0E-46 T 23-04-2016 CFF04554_RS04415 15276c6e03352ef520d648ed60a5aab6 267 SUPERFAMILY SSF47240 65 220 7.14E-9 T 23-04-2016 IPR009078 Ferritin-like superfamily CFF04554_RS04415 15276c6e03352ef520d648ed60a5aab6 267 PIRSF PIRSF012318 1 267 1.6E-66 T 23-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 CFF04554_RS04415 15276c6e03352ef520d648ed60a5aab6 267 PANTHER PTHR21496 73 265 3.0E-46 T 23-04-2016 CFF04554_RS04415 15276c6e03352ef520d648ed60a5aab6 267 Pfam PF04305 Protein of unknown function (DUF455) 14 257 2.9E-73 T 23-04-2016 IPR007402 Protein of unknown function DUF455 CFF04554_RS02365 fb1f78a1ac0437d9ce353e82d1b541e7 103 Gene3D G3DSA:3.40.250.10 4 88 1.6E-16 T 23-04-2016 IPR001763 Rhodanese-like domain CFF04554_RS02365 fb1f78a1ac0437d9ce353e82d1b541e7 103 Pfam PF00581 Rhodanese-like domain 5 88 3.8E-8 T 23-04-2016 IPR001763 Rhodanese-like domain CFF04554_RS02365 fb1f78a1ac0437d9ce353e82d1b541e7 103 SUPERFAMILY SSF52821 5 100 1.7E-13 T 23-04-2016 IPR001763 Rhodanese-like domain CFF04554_RS05910 e4f49b33ab50d2b76b2f335725fdb19c 191 Pfam PF02674 Colicin V production protein 7 150 5.5E-28 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 Gene3D G3DSA:3.40.50.300 137 236 3.5E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 Gene3D G3DSA:3.40.50.300 342 398 3.5E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 Gene3D G3DSA:3.40.50.300 11 95 2.8E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 Pfam PF05970 PIF1-like helicase 10 197 5.8E-25 T 23-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 PANTHER PTHR23274 5 425 1.0E-82 T 23-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 SUPERFAMILY SSF52540 123 315 1.33E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 SUPERFAMILY SSF52540 346 405 1.33E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 SUPERFAMILY SSF52540 6 173 9.96E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 Gene3D G3DSA:3.40.50.300 96 136 2.2E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02845 38e5577f300c4002ba9c2ad05c7da424 435 Pfam PF02689 Helicase 304 399 9.1E-7 T 23-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 CFF04554_RS05200 bc7d2b295523667ed312750227ff1913 418 PANTHER PTHR30217:SF6 1 322 2.0E-123 T 23-04-2016 CFF04554_RS05200 bc7d2b295523667ed312750227ff1913 418 Pfam PF01136 Peptidase family U32 77 307 2.6E-80 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CFF04554_RS05200 bc7d2b295523667ed312750227ff1913 418 PANTHER PTHR30217 1 322 2.0E-123 T 23-04-2016 CFF04554_RS05200 bc7d2b295523667ed312750227ff1913 418 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CFF04554_RS01280 da5617345203f950fbe37ba65deb3c0f 462 SMART SM01118 2 162 2.1E-5 T 23-04-2016 IPR023577 CYTH domain CFF04554_RS01280 da5617345203f950fbe37ba65deb3c0f 462 SUPERFAMILY SSF55154 4 159 2.07E-25 T 23-04-2016 IPR033469 CYTH-like domain CFF04554_RS01280 da5617345203f950fbe37ba65deb3c0f 462 Gene3D G3DSA:2.40.320.10 3 158 4.8E-32 T 23-04-2016 IPR023577 CYTH domain CFF04554_RS06275 3c5702a6d99b4b1a7d915a11acb768a4 223 PANTHER PTHR24220 6 221 5.9E-72 T 23-04-2016 CFF04554_RS06275 3c5702a6d99b4b1a7d915a11acb768a4 223 SMART SM00382 30 218 1.7E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS06275 3c5702a6d99b4b1a7d915a11acb768a4 223 SUPERFAMILY SSF52540 4 221 5.71E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06275 3c5702a6d99b4b1a7d915a11acb768a4 223 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS06275 3c5702a6d99b4b1a7d915a11acb768a4 223 PANTHER PTHR24220:SF470 6 221 5.9E-72 T 23-04-2016 CFF04554_RS06275 3c5702a6d99b4b1a7d915a11acb768a4 223 Pfam PF00005 ABC transporter 22 168 4.2E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS06275 3c5702a6d99b4b1a7d915a11acb768a4 223 Gene3D G3DSA:3.40.50.300 4 219 5.3E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS09040 d64a931d309579accd60d1d77b2f7182 173 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 82 159 3.8E-7 T 23-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 CFF04554_RS00545 2aa8ca6919087d10d7863018edb19210 105 PIRSF PIRSF020408 1 103 1.5E-39 T 23-04-2016 IPR016772 Uncharacterised conserved protein UCP020408 CFF04554_RS00545 2aa8ca6919087d10d7863018edb19210 105 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 2 85 8.7E-17 T 23-04-2016 IPR016772 Uncharacterised conserved protein UCP020408 CFF04554_RS00885 b84da80631749e11edf4c22e5824d871 388 PANTHER PTHR32468:SF9 9 378 5.3E-40 T 23-04-2016 CFF04554_RS00885 b84da80631749e11edf4c22e5824d871 388 PANTHER PTHR32468 9 378 5.3E-40 T 23-04-2016 CFF04554_RS00885 b84da80631749e11edf4c22e5824d871 388 Pfam PF00999 Sodium/hydrogen exchanger family 13 376 1.4E-44 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CFF04554_RS00785 8c1abe65318f544f63c7b047c6ac1491 119 PANTHER PTHR11058 11 119 4.3E-32 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 CFF04554_RS00785 8c1abe65318f544f63c7b047c6ac1491 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 118 1.8E-29 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 CFF04554_RS00785 8c1abe65318f544f63c7b047c6ac1491 119 PANTHER PTHR11058:SF5 11 119 4.3E-32 T 23-04-2016 CFF04554_RS06710 bba4a40c28ced4e130070e3287a9c6e8 156 PIRSF PIRSF002122 2 156 5.0E-58 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CFF04554_RS06710 bba4a40c28ced4e130070e3287a9c6e8 156 SUPERFAMILY SSF47973 2 152 2.35E-57 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CFF04554_RS06710 bba4a40c28ced4e130070e3287a9c6e8 156 Gene3D G3DSA:1.10.455.10 6 156 5.9E-64 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CFF04554_RS06710 bba4a40c28ced4e130070e3287a9c6e8 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 156 4.3E-68 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06710 bba4a40c28ced4e130070e3287a9c6e8 156 PANTHER PTHR11205 1 156 1.9E-79 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CFF04554_RS06710 bba4a40c28ced4e130070e3287a9c6e8 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.926 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CFF04554_RS06710 bba4a40c28ced4e130070e3287a9c6e8 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 CFF04554_RS06710 bba4a40c28ced4e130070e3287a9c6e8 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 7.3E-63 T 23-04-2016 IPR023798 Ribosomal protein S7 domain CFF04554_RS05065 2556c276de3a89756e7199a7829b1017 199 PANTHER PTHR30086:SF5 1 199 4.0E-33 T 23-04-2016 CFF04554_RS05065 2556c276de3a89756e7199a7829b1017 199 Pfam PF01810 LysE type translocator 13 197 1.1E-18 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CFF04554_RS05065 2556c276de3a89756e7199a7829b1017 199 PANTHER PTHR30086 1 199 4.0E-33 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CFF04554_RS07415 cd602e395373490b0c327c5350bf41bb 76 SUPERFAMILY SSF47598 2 40 4.5E-8 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 CFF04554_RS07415 cd602e395373490b0c327c5350bf41bb 76 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 39 1.7E-4 T 23-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CFF04554_RS08225 43c85236d3794bc028cbcb5633fd2577 170 PANTHER PTHR11055 1 163 1.5E-17 T 23-04-2016 CFF04554_RS08225 43c85236d3794bc028cbcb5633fd2577 170 Pfam PF01583 Adenylylsulphate kinase 2 143 1.1E-26 T 23-04-2016 CFF04554_RS08225 43c85236d3794bc028cbcb5633fd2577 170 Gene3D G3DSA:3.40.50.300 2 163 1.5E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08225 43c85236d3794bc028cbcb5633fd2577 170 PRINTS PR01100 Shikimate kinase family signature 3 18 1.2E-5 T 23-04-2016 CFF04554_RS08225 43c85236d3794bc028cbcb5633fd2577 170 PRINTS PR01100 Shikimate kinase family signature 92 109 1.2E-5 T 23-04-2016 CFF04554_RS08225 43c85236d3794bc028cbcb5633fd2577 170 SUPERFAMILY SSF52540 2 161 1.18E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08225 43c85236d3794bc028cbcb5633fd2577 170 PANTHER PTHR11055:SF15 1 163 1.5E-17 T 23-04-2016 CFF04554_RS08720 af9d655bf0144141fd830cbdd8dbec39 513 Pfam PF06226 Protein of unknown function (DUF1007) 34 164 8.4E-13 T 23-04-2016 IPR010412 Protein of unknown function DUF1007 CFF04554_RS08720 af9d655bf0144141fd830cbdd8dbec39 513 PANTHER PTHR40659 248 506 2.1E-19 T 23-04-2016 CFF04554_RS08720 af9d655bf0144141fd830cbdd8dbec39 513 Pfam PF03824 High-affinity nickel-transport protein 265 478 1.9E-14 T 23-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CFF04554_RS00815 e2404e15172a657dead062ecaeca39bb 425 Pfam PF00146 NADH dehydrogenase 334 418 2.0E-15 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CFF04554_RS00815 e2404e15172a657dead062ecaeca39bb 425 Pfam PF00146 NADH dehydrogenase 11 321 1.6E-88 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CFF04554_RS00815 e2404e15172a657dead062ecaeca39bb 425 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 225 238 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 CFF04554_RS00815 e2404e15172a657dead062ecaeca39bb 425 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 54 69 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 CFF04554_RS00815 e2404e15172a657dead062ecaeca39bb 425 PANTHER PTHR11432 368 425 1.0E-118 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CFF04554_RS00815 e2404e15172a657dead062ecaeca39bb 425 PANTHER PTHR11432 1 291 1.0E-118 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CFF04554_RS00815 e2404e15172a657dead062ecaeca39bb 425 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 3 424 22.29 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CFF04554_RS00815 e2404e15172a657dead062ecaeca39bb 425 PANTHER PTHR11432:SF3 368 425 1.0E-118 T 23-04-2016 CFF04554_RS00815 e2404e15172a657dead062ecaeca39bb 425 PANTHER PTHR11432:SF3 1 291 1.0E-118 T 23-04-2016 CFF04554_RS08705 b17444b6ec9a29be2f835cb911d89963 302 Pfam PF00892 EamA-like transporter family 6 135 6.3E-17 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CFF04554_RS08705 b17444b6ec9a29be2f835cb911d89963 302 Pfam PF00892 EamA-like transporter family 144 285 1.7E-15 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CFF04554_RS08705 b17444b6ec9a29be2f835cb911d89963 302 PANTHER PTHR12715:SF8 1 288 5.4E-52 T 23-04-2016 CFF04554_RS08705 b17444b6ec9a29be2f835cb911d89963 302 PANTHER PTHR12715 1 288 5.4E-52 T 23-04-2016 CFF04554_RS08705 b17444b6ec9a29be2f835cb911d89963 302 SUPERFAMILY SSF103481 211 289 7.98E-8 T 23-04-2016 CFF04554_RS08705 b17444b6ec9a29be2f835cb911d89963 302 SUPERFAMILY SSF103481 40 137 7.59E-11 T 23-04-2016 CFF04554_RS01925 560dc164e4dbd63dacf68cc092147c4f 177 Pfam PF05751 FixH 5 159 1.5E-9 T 23-04-2016 IPR008620 Nitrogen fixation protein FixH CFF04554_RS02620 4b5e7093d3a34f327603e3cf5d61c7a3 165 Pfam PF08534 Redoxin 51 152 1.2E-9 T 23-04-2016 IPR013740 Redoxin GO:0016491 CFF04554_RS02620 4b5e7093d3a34f327603e3cf5d61c7a3 165 SUPERFAMILY SSF52833 3 163 4.96E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS02620 4b5e7093d3a34f327603e3cf5d61c7a3 165 Gene3D G3DSA:3.40.30.10 4 165 4.6E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS08900 3d54370fff5ef9229a8edfb3d7b6430c 249 PANTHER PTHR40572 41 249 2.7E-28 T 23-04-2016 CFF04554_RS08900 3d54370fff5ef9229a8edfb3d7b6430c 249 SMART SM00047 96 243 5.3E-4 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CFF04554_RS08900 3d54370fff5ef9229a8edfb3d7b6430c 249 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 121 243 4.8E-17 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CFF04554_RS09320 113b7784b38c48cbd84cceff864e24aa 199 Pfam PF03432 Relaxase/Mobilisation nuclease domain 34 113 2.1E-4 T 23-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 CFF04554_RS04780 e9ae7cee557c7b9ea2a388d95198b801 233 Gene3D G3DSA:2.80.10.50 70 228 6.9E-48 T 23-04-2016 CFF04554_RS04780 e9ae7cee557c7b9ea2a388d95198b801 233 PRINTS PR01387 Cytolethal distending toxin A signature 136 148 2.6E-9 T 23-04-2016 IPR015957 Cytolethal distending toxin A CFF04554_RS04780 e9ae7cee557c7b9ea2a388d95198b801 233 PRINTS PR01387 Cytolethal distending toxin A signature 173 187 2.6E-9 T 23-04-2016 IPR015957 Cytolethal distending toxin A CFF04554_RS04780 e9ae7cee557c7b9ea2a388d95198b801 233 PRINTS PR01387 Cytolethal distending toxin A signature 93 110 2.6E-9 T 23-04-2016 IPR015957 Cytolethal distending toxin A CFF04554_RS04780 e9ae7cee557c7b9ea2a388d95198b801 233 Pfam PF03498 Cytolethal distending toxin A/C domain 86 227 1.2E-33 T 23-04-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 CFF04554_RS04780 e9ae7cee557c7b9ea2a388d95198b801 233 SUPERFAMILY SSF50370 75 228 5.64E-48 T 23-04-2016 IPR000772 Ricin B, lectin domain CFF04554_RS07310 b380555e02243911cb366dd11ee20110 71 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 21.97 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CFF04554_RS07310 b380555e02243911cb366dd11ee20110 71 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 47 8.7E-22 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CFF04554_RS07310 b380555e02243911cb366dd11ee20110 71 Pfam PF02416 mttA/Hcf106 family 5 56 2.2E-19 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CFF04554_RS07310 b380555e02243911cb366dd11ee20110 71 PANTHER PTHR33162 1 60 3.1E-15 T 23-04-2016 CFF04554_RS03080 6d2c084c1233f4e314488c59b8021d9a 354 Gene3D G3DSA:2.40.110.10 109 195 1.3E-8 T 23-04-2016 CFF04554_RS03080 6d2c084c1233f4e314488c59b8021d9a 354 SUPERFAMILY SSF56645 4 195 1.83E-18 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CFF04554_RS03080 6d2c084c1233f4e314488c59b8021d9a 354 Gene3D G3DSA:1.10.540.10 4 93 1.1E-4 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 CFF04554_RS02625 71f7ca083f99a9c4f70dcef6f1d5ef69 323 SUPERFAMILY SSF55909 5 319 3.39E-98 T 23-04-2016 CFF04554_RS02625 71f7ca083f99a9c4f70dcef6f1d5ef69 323 Gene3D G3DSA:3.75.10.10 4 317 5.4E-105 T 23-04-2016 CFF04554_RS02625 71f7ca083f99a9c4f70dcef6f1d5ef69 323 PANTHER PTHR31377 6 323 4.9E-90 T 23-04-2016 CFF04554_RS02625 71f7ca083f99a9c4f70dcef6f1d5ef69 323 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 5 317 2.0E-95 T 23-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CFF04554_RS02625 71f7ca083f99a9c4f70dcef6f1d5ef69 323 PANTHER PTHR31377:SF0 6 323 4.9E-90 T 23-04-2016 CFF04554_RS00285 628c40a5ab51ed91349acd129087c2be 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 120 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site CFF04554_RS00285 628c40a5ab51ed91349acd129087c2be 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 127 4.3E-52 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00285 628c40a5ab51ed91349acd129087c2be 130 PIRSF PIRSF002131 1 130 2.4E-47 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00285 628c40a5ab51ed91349acd129087c2be 130 PANTHER PTHR11759 12 130 1.7E-54 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00285 628c40a5ab51ed91349acd129087c2be 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 31.574 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00285 628c40a5ab51ed91349acd129087c2be 130 Gene3D G3DSA:3.30.420.80 9 130 1.5E-48 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00285 628c40a5ab51ed91349acd129087c2be 130 Pfam PF00411 Ribosomal protein S11 19 129 4.8E-41 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00285 628c40a5ab51ed91349acd129087c2be 130 SUPERFAMILY SSF53137 14 130 7.85E-43 T 23-04-2016 CFF04554_RS02430 0c3281edc4cfb07456b5c75034c8a2b9 1108 SUPERFAMILY SSF53756 473 693 1.73E-18 T 23-04-2016 CFF04554_RS02430 0c3281edc4cfb07456b5c75034c8a2b9 1108 Pfam PF00534 Glycosyl transferases group 1 897 1038 1.9E-6 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS02430 0c3281edc4cfb07456b5c75034c8a2b9 1108 Pfam PF00534 Glycosyl transferases group 1 523 671 1.0E-7 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS02430 0c3281edc4cfb07456b5c75034c8a2b9 1108 SUPERFAMILY SSF53756 747 1093 2.83E-20 T 23-04-2016 CFF04554_RS02430 0c3281edc4cfb07456b5c75034c8a2b9 1108 Pfam PF13847 Methyltransferase domain 36 139 2.7E-11 T 23-04-2016 IPR025714 Methyltransferase domain CFF04554_RS02430 0c3281edc4cfb07456b5c75034c8a2b9 1108 Gene3D G3DSA:3.40.50.2000 535 654 2.3E-4 T 23-04-2016 CFF04554_RS02430 0c3281edc4cfb07456b5c75034c8a2b9 1108 PANTHER PTHR10108 41 184 7.7E-14 T 23-04-2016 CFF04554_RS02430 0c3281edc4cfb07456b5c75034c8a2b9 1108 Gene3D G3DSA:3.40.50.150 30 193 1.8E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02430 0c3281edc4cfb07456b5c75034c8a2b9 1108 SUPERFAMILY SSF53335 20 185 1.88E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02890 a5d51b654d0e4a5b981dbf08be8df81d 443 Pfam PF00860 Permease family 15 390 3.4E-33 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS02890 a5d51b654d0e4a5b981dbf08be8df81d 443 PANTHER PTHR11119:SF9 3 419 1.0E-125 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 CFF04554_RS02890 a5d51b654d0e4a5b981dbf08be8df81d 443 PANTHER PTHR11119 3 419 1.0E-125 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CFF04554_RS01610 1569acedfc80cd1633967c0755a787fc 255 Gene3D G3DSA:3.90.1170.20 56 103 1.9E-8 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CFF04554_RS01610 1569acedfc80cd1633967c0755a787fc 255 Gene3D G3DSA:3.90.1170.20 6 55 1.6E-4 T 23-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 CFF04554_RS01610 1569acedfc80cd1633967c0755a787fc 255 PANTHER PTHR11948 48 246 3.3E-29 T 23-04-2016 CFF04554_RS01610 1569acedfc80cd1633967c0755a787fc 255 SUPERFAMILY SSF54675 5 80 1.96E-6 T 23-04-2016 CFF04554_RS01610 1569acedfc80cd1633967c0755a787fc 255 Gene3D G3DSA:3.20.20.70 104 242 3.2E-34 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS01610 1569acedfc80cd1633967c0755a787fc 255 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 81 246 1.1E-30 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CFF04554_RS01610 1569acedfc80cd1633967c0755a787fc 255 PANTHER PTHR11948:SF1 48 246 3.3E-29 T 23-04-2016 CFF04554_RS01610 1569acedfc80cd1633967c0755a787fc 255 SUPERFAMILY SSF51690 81 246 1.77E-36 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 217 3.3E-70 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 PANTHER PTHR30371:SF0 8 251 1.4E-88 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 6 222 9.0E-70 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 PANTHER PTHR30371 8 251 1.4E-88 T 23-04-2016 CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 237 19.187 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 ProSitePatterns PS01218 TatC family signature. 150 169 - T 23-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 150 178 6.8E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 81 99 6.8E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 4 31 6.8E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CFF04554_RS05790 1a5ece6b186f64888fb3104ee39f62cc 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 99 125 6.8E-43 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CFF04554_RS03550 2dbfdc649ab7c8fd1823b692069ae69c 220 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 26 208 6.1E-56 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CFF04554_RS03550 2dbfdc649ab7c8fd1823b692069ae69c 220 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 220 72.12 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CFF04554_RS03550 2dbfdc649ab7c8fd1823b692069ae69c 220 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 26 191 9.2E-61 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CFF04554_RS03550 2dbfdc649ab7c8fd1823b692069ae69c 220 SUPERFAMILY SSF55729 4 212 5.83E-73 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS03550 2dbfdc649ab7c8fd1823b692069ae69c 220 PANTHER PTHR30098 14 202 1.9E-54 T 23-04-2016 CFF04554_RS05320 58c9e965c6b791827bad552efaf42519 169 SUPERFAMILY SSF54637 40 140 3.03E-15 T 23-04-2016 IPR029069 HotDog domain CFF04554_RS05320 58c9e965c6b791827bad552efaf42519 169 Gene3D G3DSA:3.10.129.10 29 149 6.5E-21 T 23-04-2016 IPR029069 HotDog domain CFF04554_RS00930 aa297262befde8a5f75aa54560e686f2 352 Pfam PF04143 Sulphur transport 210 320 4.0E-7 T 23-04-2016 IPR007272 Sulphur transport domain CFF04554_RS00930 aa297262befde8a5f75aa54560e686f2 352 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 6 344 7.4E-122 T 23-04-2016 IPR026366 Putative selenium metabolism protein, YedE family CFF04554_RS08945 e65e45289aaee7b54c7110f2b43517d9 137 Pfam PF06271 RDD family 12 129 3.1E-12 T 23-04-2016 IPR010432 RDD CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 PANTHER PTHR11075:SF6 5 369 1.1E-147 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 Gene3D G3DSA:1.20.58.410 3 114 1.0E-23 T 23-04-2016 CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 362 1.4E-157 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 SUPERFAMILY SSF75620 30 361 6.41E-126 T 23-04-2016 CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 Pfam PF00472 RF-1 domain 228 335 3.9E-41 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 Gene3D G3DSA:3.30.160.20 227 304 3.1E-38 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 Pfam PF03462 PCRF domain 30 219 1.9E-57 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 PANTHER PTHR11075 5 369 1.1E-147 T 23-04-2016 CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 37.465 T 23-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 CFF04554_RS06980 cb1cf6b5e1bcda942c0c119c03804f30 369 SMART SM00937 84 194 6.4E-56 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CFF04554_RS04275 0d4261192f39aa52c94438cc7d4b4fc2 242 SMART SM00382 28 213 7.3E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS04275 0d4261192f39aa52c94438cc7d4b4fc2 242 Gene3D G3DSA:3.40.50.300 3 230 1.9E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04275 0d4261192f39aa52c94438cc7d4b4fc2 242 PANTHER PTHR24220:SF497 5 237 7.3E-125 T 23-04-2016 CFF04554_RS04275 0d4261192f39aa52c94438cc7d4b4fc2 242 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 240 5.5E-104 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CFF04554_RS04275 0d4261192f39aa52c94438cc7d4b4fc2 242 PANTHER PTHR24220 5 237 7.3E-125 T 23-04-2016 CFF04554_RS04275 0d4261192f39aa52c94438cc7d4b4fc2 242 Pfam PF00005 ABC transporter 20 165 7.4E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS04275 0d4261192f39aa52c94438cc7d4b4fc2 242 SUPERFAMILY SSF52540 4 235 1.82E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 6.3E-24 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 SUPERFAMILY SSF55658 1 56 4.88E-17 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 6.0E-42 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 SUPERFAMILY SSF55653 61 146 4.58E-22 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 Gene3D G3DSA:3.10.430.100 62 146 2.5E-25 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 5.3E-20 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 Gene3D G3DSA:3.40.5.10 1 52 6.8E-22 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 24.127 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal CFF04554_RS04955 b566f7fde42f1a9b44c66bc2337bfbdf 147 PANTHER PTHR21368 1 145 4.0E-36 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS02355 141990dc6c604775e81094671e47ad39 367 Pfam PF01594 Domain of unknown function DUF20 23 353 3.4E-36 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CFF04554_RS02355 141990dc6c604775e81094671e47ad39 367 PANTHER PTHR21716 25 353 9.4E-30 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like CFF04554_RS02355 141990dc6c604775e81094671e47ad39 367 PANTHER PTHR21716:SF13 25 353 9.4E-30 T 23-04-2016 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 Gene3D G3DSA:1.10.1670.10 122 207 1.8E-27 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 PANTHER PTHR10359:SF18 21 208 1.2E-58 T 23-04-2016 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 PANTHER PTHR10359 21 208 1.2E-58 T 23-04-2016 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 PIRSF PIRSF001435 1 209 6.5E-42 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 2.1E-20 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 3.1E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 Hamap MF_00942 Endonuclease III [nth]. 1 209 31.989 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 SUPERFAMILY SSF48150 4 207 1.11E-57 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 Gene3D G3DSA:1.10.340.30 24 121 6.6E-30 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 SMART SM00478 39 185 2.3E-42 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CFF04554_RS02530 83f8f67afb566d0cae4d535f1a37e125 210 SMART SM00525 186 206 4.1E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CFF04554_RS01400 5fa2a5fc9946a3c4e055ca72ad14224a 263 Pfam PF13847 Methyltransferase domain 60 155 1.1E-14 T 23-04-2016 IPR025714 Methyltransferase domain CFF04554_RS01400 5fa2a5fc9946a3c4e055ca72ad14224a 263 Gene3D G3DSA:3.40.50.150 30 156 8.9E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS01400 5fa2a5fc9946a3c4e055ca72ad14224a 263 SUPERFAMILY SSF53335 27 165 2.81E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS00825 49f28e26a317e01301a0b09e7cc11d74 164 PANTHER PTHR33269:SF1 1 157 2.1E-26 T 23-04-2016 CFF04554_RS00825 49f28e26a317e01301a0b09e7cc11d74 164 PANTHER PTHR33269 1 157 2.1E-26 T 23-04-2016 CFF04554_RS00825 49f28e26a317e01301a0b09e7cc11d74 164 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 157 6.5E-26 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 CFF04554_RS07040 3426edb40c8bb0e96da6ca05f4536793 201 PANTHER PTHR30576 1 189 1.3E-92 T 23-04-2016 CFF04554_RS07040 3426edb40c8bb0e96da6ca05f4536793 201 PANTHER PTHR30576:SF8 1 189 1.3E-92 T 23-04-2016 CFF04554_RS07040 3426edb40c8bb0e96da6ca05f4536793 201 Pfam PF02397 Bacterial sugar transferase 7 181 7.7E-54 T 23-04-2016 IPR003362 Bacterial sugar transferase CFF04554_RS07875 37c1ae4cae2b7a6e69dd742b978e6072 246 Pfam PF13098 Thioredoxin-like domain 129 223 6.9E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS07875 37c1ae4cae2b7a6e69dd742b978e6072 246 Gene3D G3DSA:3.40.30.10 123 240 8.1E-13 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS07875 37c1ae4cae2b7a6e69dd742b978e6072 246 SUPERFAMILY SSF52833 109 240 6.37E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS08320 7fb78a945a1949a1dafa6c6cf407bff0 499 Pfam PF02600 Disulfide bond formation protein DsbB 12 92 1.5E-11 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CFF04554_RS08320 7fb78a945a1949a1dafa6c6cf407bff0 499 SUPERFAMILY SSF158442 13 127 4.05E-15 T 23-04-2016 CFF04554_RS00120 16cb2d97f7687a151153e97d1c02055c 182 Pfam PF03498 Cytolethal distending toxin A/C domain 24 179 1.1E-26 T 23-04-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 CFF04554_RS00120 16cb2d97f7687a151153e97d1c02055c 182 SUPERFAMILY SSF50370 13 181 2.06E-39 T 23-04-2016 IPR000772 Ricin B, lectin domain CFF04554_RS00120 16cb2d97f7687a151153e97d1c02055c 182 Gene3D G3DSA:2.80.10.50 21 181 1.3E-22 T 23-04-2016 CFF04554_RS07495 3a15111447ed00d697f05cf0dac5ae4e 182 Pfam PF03923 Uncharacterized lipoprotein 36 147 1.5E-5 T 23-04-2016 IPR005619 Uncharacterised protein family, YajG CFF04554_RS07630 5eb17df1cbb9705e21bb9c32f6fd3439 460 Pfam PF01551 Peptidase family M23 339 432 4.8E-18 T 23-04-2016 IPR016047 Peptidase M23 CFF04554_RS07630 5eb17df1cbb9705e21bb9c32f6fd3439 460 PANTHER PTHR21666 210 441 2.2E-17 T 23-04-2016 CFF04554_RS07630 5eb17df1cbb9705e21bb9c32f6fd3439 460 SUPERFAMILY SSF51261 177 436 3.24E-39 T 23-04-2016 IPR011055 Duplicated hybrid motif CFF04554_RS07630 5eb17df1cbb9705e21bb9c32f6fd3439 460 Gene3D G3DSA:2.70.70.10 296 438 2.6E-28 T 23-04-2016 CFF04554_RS06415 fafd81ae1c91ab17cc074151e48cb341 179 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 2 175 5.9E-60 T 23-04-2016 IPR006287 DJ-1 CFF04554_RS06415 fafd81ae1c91ab17cc074151e48cb341 179 PANTHER PTHR11019 2 173 6.1E-54 T 23-04-2016 CFF04554_RS06415 fafd81ae1c91ab17cc074151e48cb341 179 SUPERFAMILY SSF52317 1 177 8.71E-51 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS06415 fafd81ae1c91ab17cc074151e48cb341 179 PANTHER PTHR11019:SF4 2 173 6.1E-54 T 23-04-2016 CFF04554_RS06415 fafd81ae1c91ab17cc074151e48cb341 179 Pfam PF01965 DJ-1/PfpI family 1 162 9.3E-47 T 23-04-2016 IPR002818 DJ-1/PfpI CFF04554_RS06415 fafd81ae1c91ab17cc074151e48cb341 179 Gene3D G3DSA:3.40.50.880 1 178 8.6E-58 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01805 53397cb89f9883d70dffbced499eddf3 283 Pfam PF00005 ABC transporter 17 153 4.3E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS01805 53397cb89f9883d70dffbced499eddf3 283 SUPERFAMILY SSF52540 10 226 2.6E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01805 53397cb89f9883d70dffbced499eddf3 283 PANTHER PTHR24220 17 217 1.3E-75 T 23-04-2016 CFF04554_RS01805 53397cb89f9883d70dffbced499eddf3 283 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CFF04554_RS01805 53397cb89f9883d70dffbced499eddf3 283 Gene3D G3DSA:3.40.50.300 17 231 1.5E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01805 53397cb89f9883d70dffbced499eddf3 283 SMART SM00382 24 202 1.7E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS08390 440ee9d4a73219436e28157a9ac9e9c5 392 PANTHER PTHR30094:SF0 45 392 4.3E-46 T 23-04-2016 CFF04554_RS08390 440ee9d4a73219436e28157a9ac9e9c5 392 PANTHER PTHR30094 45 392 4.3E-46 T 23-04-2016 CFF04554_RS08390 440ee9d4a73219436e28157a9ac9e9c5 392 SUPERFAMILY SSF52440 179 289 9.21E-14 T 23-04-2016 IPR016185 Pre-ATP-grasp domain CFF04554_RS08390 440ee9d4a73219436e28157a9ac9e9c5 392 SUPERFAMILY SSF56059 13 163 7.77E-60 T 23-04-2016 CFF04554_RS08390 440ee9d4a73219436e28157a9ac9e9c5 392 SUPERFAMILY SSF56059 276 390 7.77E-60 T 23-04-2016 CFF04554_RS08390 440ee9d4a73219436e28157a9ac9e9c5 392 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 13 391 4.1E-117 T 23-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CFF04554_RS01170 30022de8268f75ed60c4cfb86c5b6d77 48 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 48 13.206 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CFF04554_RS01170 30022de8268f75ed60c4cfb86c5b6d77 48 Pfam PF01783 Ribosomal L32p protein family 2 48 8.7E-11 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CFF04554_RS01170 30022de8268f75ed60c4cfb86c5b6d77 48 SUPERFAMILY SSF57829 1 48 1.89E-11 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CFF04554_RS01170 30022de8268f75ed60c4cfb86c5b6d77 48 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 48 1.0E-15 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 SUPERFAMILY SSF63411 4 161 6.04E-65 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 152 6.0E-60 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 PANTHER PTHR35799 2 166 3.7E-88 T 23-04-2016 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 PIRSF PIRSF006160 1 162 2.2E-64 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.38 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 155 1.0E-61 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 Gene3D G3DSA:3.30.1360.80 1 163 1.8E-69 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.7E-47 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.7E-47 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.7E-47 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.7E-47 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS00560 23226a401c534af68e46b42fe7a79be4 166 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.7E-47 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CFF04554_RS02085 fe16e1a0d06c304f92db0c20e44c2abc 258 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 105 221 4.3E-16 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 CFF04554_RS02085 fe16e1a0d06c304f92db0c20e44c2abc 258 SUPERFAMILY SSF81343 2 239 1.7E-75 T 23-04-2016 CFF04554_RS02085 fe16e1a0d06c304f92db0c20e44c2abc 258 PIRSF PIRSF000177 1 255 3.9E-112 T 23-04-2016 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit GO:0006099 CFF04554_RS02085 fe16e1a0d06c304f92db0c20e44c2abc 258 Gene3D G3DSA:1.20.950.10 2 247 2.2E-90 T 23-04-2016 CFF04554_RS01110 7630c4e18f53f69e420c93d709e24157 382 Gene3D G3DSA:3.40.50.1970 1 181 1.0E-53 T 23-04-2016 CFF04554_RS01110 7630c4e18f53f69e420c93d709e24157 382 SUPERFAMILY SSF56796 1 379 1.03E-102 T 23-04-2016 CFF04554_RS01110 7630c4e18f53f69e420c93d709e24157 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 3.7E-86 T 23-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 CFF04554_RS01110 7630c4e18f53f69e420c93d709e24157 382 PANTHER PTHR11496:SF65 1 381 1.0E-144 T 23-04-2016 CFF04554_RS01110 7630c4e18f53f69e420c93d709e24157 382 Gene3D G3DSA:1.20.1090.10 183 381 1.2E-48 T 23-04-2016 CFF04554_RS01110 7630c4e18f53f69e420c93d709e24157 382 PANTHER PTHR11496 1 381 1.0E-144 T 23-04-2016 CFF04554_RS04630 1b8c4211b4cef71232c8d3282f828e65 207 PANTHER PTHR30506 1 207 9.5E-41 T 23-04-2016 CFF04554_RS04630 1b8c4211b4cef71232c8d3282f828e65 207 Pfam PF03458 UPF0126 domain 6 78 4.3E-14 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 CFF04554_RS04630 1b8c4211b4cef71232c8d3282f828e65 207 Pfam PF03458 UPF0126 domain 97 168 1.2E-17 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 CFF04554_RS04855 e54a3383c789a388e1f57e33087cf9ea 75 Pfam PF04325 Protein of unknown function (DUF465) 19 66 2.5E-15 T 23-04-2016 IPR007420 Protein of unknown function DUF465 CFF04554_RS00385 cf4afdc08e2b66e757f3652eefe2ab4b 205 Gene3D G3DSA:3.30.230.30 3 126 1.0E-35 T 23-04-2016 IPR001498 Impact, N-terminal CFF04554_RS00385 cf4afdc08e2b66e757f3652eefe2ab4b 205 Pfam PF01205 Uncharacterized protein family UPF0029 15 118 7.2E-23 T 23-04-2016 IPR001498 Impact, N-terminal CFF04554_RS00385 cf4afdc08e2b66e757f3652eefe2ab4b 205 SUPERFAMILY SSF54211 3 125 7.21E-34 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS00385 cf4afdc08e2b66e757f3652eefe2ab4b 205 PANTHER PTHR16301 1 203 7.6E-35 T 23-04-2016 IPR023582 Impact family CFF04554_RS09060 80ae0c8a9497df26e690a71710545b5a 288 PANTHER PTHR30015 1 288 1.0E-47 T 23-04-2016 CFF04554_RS09060 80ae0c8a9497df26e690a71710545b5a 288 Pfam PF14338 Mrr N-terminal domain 5 93 1.1E-13 T 23-04-2016 IPR025745 Restriction system protein Mrr-like N-terminal domain CFF04554_RS09060 80ae0c8a9497df26e690a71710545b5a 288 PANTHER PTHR30015:SF5 1 288 1.0E-47 T 23-04-2016 CFF04554_RS09060 80ae0c8a9497df26e690a71710545b5a 288 Pfam PF04471 Restriction endonuclease 145 261 1.8E-29 T 23-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 CFF04554_RS09060 80ae0c8a9497df26e690a71710545b5a 288 Gene3D G3DSA:3.40.1350.10 137 263 1.1E-12 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CFF04554_RS09060 80ae0c8a9497df26e690a71710545b5a 288 SUPERFAMILY SSF52980 147 264 6.43E-14 T 23-04-2016 IPR011335 Restriction endonuclease type II-like CFF04554_RS08715 2d120fd5da485027fa682acb5fed182e 251 Pfam PF00005 ABC transporter 18 163 3.8E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CFF04554_RS08715 2d120fd5da485027fa682acb5fed182e 251 SMART SM00382 27 211 4.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS08715 2d120fd5da485027fa682acb5fed182e 251 Gene3D G3DSA:3.40.50.300 2 209 9.1E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08715 2d120fd5da485027fa682acb5fed182e 251 PANTHER PTHR24220 4 206 3.3E-69 T 23-04-2016 CFF04554_RS08715 2d120fd5da485027fa682acb5fed182e 251 SUPERFAMILY SSF52540 3 210 2.39E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08910 e303f7541bf42d714ec77a67b80763c7 179 PANTHER PTHR10695 1 175 2.9E-42 T 23-04-2016 CFF04554_RS08910 e303f7541bf42d714ec77a67b80763c7 179 SUPERFAMILY SSF52540 3 169 1.61E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08910 e303f7541bf42d714ec77a67b80763c7 179 Pfam PF01121 Dephospho-CoA kinase 3 157 1.7E-30 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CFF04554_RS08910 e303f7541bf42d714ec77a67b80763c7 179 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 173 17.047 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CFF04554_RS08910 e303f7541bf42d714ec77a67b80763c7 179 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 163 3.9E-39 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CFF04554_RS08910 e303f7541bf42d714ec77a67b80763c7 179 Gene3D G3DSA:3.40.50.300 1 173 1.9E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 Gene3D G3DSA:3.30.230.40 3 80 3.3E-31 T 23-04-2016 CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 29 170 1.0E-57 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 PANTHER PTHR23133 5 190 2.1E-85 T 23-04-2016 CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 Gene3D G3DSA:3.30.230.40 88 190 5.7E-31 T 23-04-2016 CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 153 165 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 SUPERFAMILY SSF54211 3 80 2.28E-28 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 SUPERFAMILY SSF54211 86 175 1.64E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 PANTHER PTHR23133:SF2 5 190 2.1E-85 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CFF04554_RS06135 625f4f2f3be4217ab210f540f3dae5f4 190 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 1 190 35.549 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CFF04554_RS03430 a5f678c90f7fffdadf312c09da203064 493 PANTHER PTHR11101 1 272 1.1E-133 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 CFF04554_RS03430 a5f678c90f7fffdadf312c09da203064 493 PANTHER PTHR11101 321 490 1.1E-133 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 CFF04554_RS03430 a5f678c90f7fffdadf312c09da203064 493 Pfam PF01384 Phosphate transporter family 29 478 7.6E-110 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 CFF04554_RS05075 eeaf2b78d7896908d4a28ed68efcf9ad 158 Pfam PF14358 Domain of unknown function (DUF4405) 9 57 6.0E-8 T 23-04-2016 IPR025517 Domain of unknown function DUF4405 CFF04554_RS06315 7bed9b4c9c6e6f876100b8e35f33aa6a 211 Gene3D G3DSA:3.40.50.720 1 208 2.3E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06315 7bed9b4c9c6e6f876100b8e35f33aa6a 211 PANTHER PTHR15020 3 210 4.7E-40 T 23-04-2016 CFF04554_RS06315 7bed9b4c9c6e6f876100b8e35f33aa6a 211 Pfam PF13460 NAD(P)H-binding 9 196 3.8E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS06315 7bed9b4c9c6e6f876100b8e35f33aa6a 211 PANTHER PTHR15020:SF29 3 210 4.7E-40 T 23-04-2016 CFF04554_RS06315 7bed9b4c9c6e6f876100b8e35f33aa6a 211 SUPERFAMILY SSF51735 1 208 1.24E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain CFF04554_RS05670 123b12327bf347de00be1aa2dc6bbb6a 69 SUPERFAMILY SSF57783 3 62 5.78E-5 T 23-04-2016 CFF04554_RS06030 309e518284916900fa27ad349ca18dfd 203 Pfam PF09335 SNARE associated Golgi protein 28 146 7.0E-16 T 23-04-2016 IPR032816 SNARE associated Golgi protein CFF04554_RS06030 309e518284916900fa27ad349ca18dfd 203 PANTHER PTHR30353 1 201 3.5E-29 T 23-04-2016 IPR032818 DedA family CFF04554_RS05960 9427e54183b4652ea44e11053b4989f4 263 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 42 260 1.1E-56 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CFF04554_RS05960 9427e54183b4652ea44e11053b4989f4 263 Pfam PF02666 Phosphatidylserine decarboxylase 50 260 6.0E-46 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CFF04554_RS05960 9427e54183b4652ea44e11053b4989f4 263 PANTHER PTHR10067 6 262 6.3E-52 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CFF04554_RS01285 904fe627775106ccc23eae98c24ff6da 425 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 5 146 2.8E-21 T 23-04-2016 IPR009827 Dicarboxylate carrier MatC N-terminal CFF04554_RS04985 808aae9249797550a0e66991d0d129a9 209 Gene3D G3DSA:3.30.70.60 114 200 1.7E-6 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CFF04554_RS04135 45039214a3af6e197f7b8a221e1ec183 431 SUPERFAMILY SSF56219 17 265 6.02E-30 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS04135 45039214a3af6e197f7b8a221e1ec183 431 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 21 256 7.1E-15 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS04135 45039214a3af6e197f7b8a221e1ec183 431 Gene3D G3DSA:3.60.10.10 16 183 9.9E-13 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS06920 b7a365c974711277df5640f019b96266 174 Pfam PF02525 Flavodoxin-like fold 1 171 3.9E-37 T 23-04-2016 IPR003680 Flavodoxin-like fold CFF04554_RS06920 b7a365c974711277df5640f019b96266 174 PANTHER PTHR10204:SF42 1 172 6.3E-54 T 23-04-2016 CFF04554_RS06920 b7a365c974711277df5640f019b96266 174 SUPERFAMILY SSF52218 1 174 3.81E-43 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS06920 b7a365c974711277df5640f019b96266 174 PANTHER PTHR10204 1 172 6.3E-54 T 23-04-2016 CFF04554_RS06920 b7a365c974711277df5640f019b96266 174 Gene3D G3DSA:3.40.50.360 1 174 9.5E-43 T 23-04-2016 IPR029039 Flavoprotein-like domain CFF04554_RS07435 006b84d18919db5c5b8ac4d0b01b4c68 169 Pfam PF03350 Uncharacterized protein family, UPF0114 10 134 1.3E-33 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 CFF04554_RS07435 006b84d18919db5c5b8ac4d0b01b4c68 169 PANTHER PTHR31721 1 165 4.3E-24 T 23-04-2016 CFF04554_RS07435 006b84d18919db5c5b8ac4d0b01b4c68 169 PIRSF PIRSF026509 1 169 6.6E-46 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 CFF04554_RS06295 0439fe97682d765318901e0fda7161de 368 PANTHER PTHR30474 1 351 1.8E-90 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CFF04554_RS06295 0439fe97682d765318901e0fda7161de 368 PANTHER PTHR30474:SF1 1 351 1.8E-90 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CFF04554_RS06295 0439fe97682d765318901e0fda7161de 368 Pfam PF01098 Cell cycle protein 18 354 4.2E-90 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CFF04554_RS08050 83f2da0ad1e16211361ebf89d1ceea86 310 SUPERFAMILY SSF102114 11 268 4.71E-26 T 23-04-2016 CFF04554_RS08050 83f2da0ad1e16211361ebf89d1ceea86 310 Gene3D G3DSA:3.20.20.70 8 269 2.0E-26 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS01060 cecaa85a4688320b3cbfdd990839f5b8 245 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 140 243 6.3E-11 T 23-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 CFF04554_RS01060 cecaa85a4688320b3cbfdd990839f5b8 245 SUPERFAMILY SSF55166 135 243 7.85E-6 T 23-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CFF04554_RS02550 6dc1564bcd648f8d61c2cd7f7c6e5121 334 SUPERFAMILY SSF103088 195 314 1.96E-18 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS02550 6dc1564bcd648f8d61c2cd7f7c6e5121 334 PRINTS PR01021 OMPA domain signature 257 273 5.7E-6 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CFF04554_RS02550 6dc1564bcd648f8d61c2cd7f7c6e5121 334 PRINTS PR01021 OMPA domain signature 242 257 5.7E-6 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CFF04554_RS02550 6dc1564bcd648f8d61c2cd7f7c6e5121 334 Gene3D G3DSA:3.30.1330.60 189 314 3.5E-23 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS02550 6dc1564bcd648f8d61c2cd7f7c6e5121 334 Pfam PF00691 OmpA family 203 301 8.4E-11 T 23-04-2016 IPR006665 OmpA-like domain CFF04554_RS03865 7cc3dcef5d8d63b33982bfbc9b0077af 257 PANTHER PTHR30269:SF0 3 255 9.3E-75 T 23-04-2016 CFF04554_RS03865 7cc3dcef5d8d63b33982bfbc9b0077af 257 Pfam PF01925 Sulfite exporter TauE/SafE 11 246 1.5E-43 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CFF04554_RS03865 7cc3dcef5d8d63b33982bfbc9b0077af 257 PANTHER PTHR30269 3 255 9.3E-75 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CFF04554_RS06610 4d11cf40de70674c0344041ba5c84265 297 SUPERFAMILY SSF46689 241 287 4.93E-11 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS06610 4d11cf40de70674c0344041ba5c84265 297 Pfam PF12833 Helix-turn-helix domain 211 286 6.1E-20 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CFF04554_RS06610 4d11cf40de70674c0344041ba5c84265 297 PANTHER PTHR11019 25 296 1.6E-62 T 23-04-2016 CFF04554_RS06610 4d11cf40de70674c0344041ba5c84265 297 Pfam PF06719 AraC-type transcriptional regulator N-terminus 25 174 4.8E-37 T 23-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal CFF04554_RS06610 4d11cf40de70674c0344041ba5c84265 297 PANTHER PTHR11019:SF81 25 296 1.6E-62 T 23-04-2016 CFF04554_RS06610 4d11cf40de70674c0344041ba5c84265 297 Gene3D G3DSA:1.10.10.60 189 242 1.8E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS06610 4d11cf40de70674c0344041ba5c84265 297 Gene3D G3DSA:1.10.10.60 243 286 3.1E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS06610 4d11cf40de70674c0344041ba5c84265 297 SUPERFAMILY SSF46689 189 239 5.38E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS06610 4d11cf40de70674c0344041ba5c84265 297 SMART SM00342 205 288 4.5E-22 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CFF04554_RS01835 893ff267d20d40bfbe9b39cb412dbb62 821 SUPERFAMILY SSF82866 610 818 9.42E-30 T 23-04-2016 CFF04554_RS01835 893ff267d20d40bfbe9b39cb412dbb62 821 Gene3D G3DSA:1.20.1640.10 620 820 1.3E-30 T 23-04-2016 CFF04554_RS01835 893ff267d20d40bfbe9b39cb412dbb62 821 Gene3D G3DSA:1.20.1640.10 243 418 1.0E-31 T 23-04-2016 CFF04554_RS01835 893ff267d20d40bfbe9b39cb412dbb62 821 SUPERFAMILY SSF82866 222 411 2.35E-23 T 23-04-2016 CFF04554_RS01835 893ff267d20d40bfbe9b39cb412dbb62 821 Pfam PF03176 MMPL family 214 428 1.6E-11 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CFF04554_RS01835 893ff267d20d40bfbe9b39cb412dbb62 821 Pfam PF03176 MMPL family 593 811 1.1E-10 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CFF04554_RS01555 2b5f321b92898844a2aac157626ed549 1022 Pfam PF05359 Domain of Unknown Function (DUF748) 138 272 4.5E-12 T 23-04-2016 IPR008023 Protein of unknown function DUF748 CFF04554_RS01555 2b5f321b92898844a2aac157626ed549 1022 Pfam PF05359 Domain of Unknown Function (DUF748) 462 588 2.5E-7 T 23-04-2016 IPR008023 Protein of unknown function DUF748 CFF04554_RS01555 2b5f321b92898844a2aac157626ed549 1022 Pfam PF05359 Domain of Unknown Function (DUF748) 653 798 4.6E-29 T 23-04-2016 IPR008023 Protein of unknown function DUF748 CFF04554_RS00965 820aba960b8db037f0c1af51c67ac92f 73 Gene3D G3DSA:3.10.20.30 10 73 2.5E-10 T 23-04-2016 IPR012675 Beta-grasp domain CFF04554_RS00965 820aba960b8db037f0c1af51c67ac92f 73 Pfam PF02597 ThiS family 6 73 2.1E-11 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CFF04554_RS00965 820aba960b8db037f0c1af51c67ac92f 73 SUPERFAMILY SSF54285 2 73 2.94E-12 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CFF04554_RS08040 f2832ecd7b438f45b8c0afdf263187d3 148 SUPERFAMILY SSF110087 4 136 3.92E-42 T 23-04-2016 IPR007410 DR1885-like metal-binding protein CFF04554_RS08040 f2832ecd7b438f45b8c0afdf263187d3 148 Pfam PF04314 Protein of unknown function (DUF461) 22 129 3.8E-35 T 23-04-2016 IPR007410 DR1885-like metal-binding protein CFF04554_RS08040 f2832ecd7b438f45b8c0afdf263187d3 148 PANTHER PTHR36302 17 131 3.4E-26 T 23-04-2016 CFF04554_RS08040 f2832ecd7b438f45b8c0afdf263187d3 148 PANTHER PTHR36302:SF1 17 131 3.4E-26 T 23-04-2016 CFF04554_RS03100 4555163de11a73c5b8f4f4b6c660922c 200 PANTHER PTHR30086 1 195 1.4E-23 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CFF04554_RS03100 4555163de11a73c5b8f4f4b6c660922c 200 Pfam PF01810 LysE type translocator 16 194 7.3E-29 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CFF04554_RS02035 b85f0818706f1776a36248d9254ab04f 150 PANTHER PTHR36305 3 149 9.8E-34 T 23-04-2016 CFF04554_RS02035 b85f0818706f1776a36248d9254ab04f 150 Pfam PF04608 Phosphatidylglycerophosphatase A 3 143 6.8E-45 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CFF04554_RS02035 b85f0818706f1776a36248d9254ab04f 150 Gene3D G3DSA:1.10.3760.10 52 142 3.0E-7 T 23-04-2016 IPR027416 YutG-like domain CFF04554_RS02035 b85f0818706f1776a36248d9254ab04f 150 PIRSF PIRSF006162 1 150 2.4E-42 T 23-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CFF04554_RS02035 b85f0818706f1776a36248d9254ab04f 150 SUPERFAMILY SSF101307 3 145 1.96E-36 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CFF04554_RS04380 74d7d600be69ec96eaa4fc2428e02215 439 Pfam PF01554 MatE 238 397 4.8E-12 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CFF04554_RS04380 74d7d600be69ec96eaa4fc2428e02215 439 Pfam PF01554 MatE 15 176 1.5E-27 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CFF04554_RS04380 74d7d600be69ec96eaa4fc2428e02215 439 PIRSF PIRSF006603 4 436 6.0E-57 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CFF04554_RS04380 74d7d600be69ec96eaa4fc2428e02215 439 PANTHER PTHR11206 5 427 5.3E-47 T 23-04-2016 CFF04554_RS05805 fa7a0d977acd0681a10467b1246173d9 287 PANTHER PTHR22807 32 287 3.9E-58 T 23-04-2016 CFF04554_RS05805 fa7a0d977acd0681a10467b1246173d9 287 SUPERFAMILY SSF53335 10 286 1.98E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05805 fa7a0d977acd0681a10467b1246173d9 287 Gene3D G3DSA:3.40.50.150 89 286 6.2E-54 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05805 fa7a0d977acd0681a10467b1246173d9 287 Pfam PF01189 16S rRNA methyltransferase RsmB/F 95 284 1.5E-46 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS05805 fa7a0d977acd0681a10467b1246173d9 287 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 77 91 6.5E-20 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS05805 fa7a0d977acd0681a10467b1246173d9 287 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 173 185 6.5E-20 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS05805 fa7a0d977acd0681a10467b1246173d9 287 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 269 286 6.5E-20 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS05805 fa7a0d977acd0681a10467b1246173d9 287 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 220 236 6.5E-20 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS05805 fa7a0d977acd0681a10467b1246173d9 287 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 106 116 6.5E-20 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CFF04554_RS05890 5cdf04dc286d2f256c494f5233074b1b 180 SUPERFAMILY SSF56747 4 178 1.37E-90 T 23-04-2016 CFF04554_RS05890 5cdf04dc286d2f256c494f5233074b1b 180 Gene3D G3DSA:3.90.920.20 1 180 1.6E-92 T 23-04-2016 CFF04554_RS05890 5cdf04dc286d2f256c494f5233074b1b 180 Pfam PF08966 Domain of unknown function (DUF1882) 1 73 1.9E-34 T 23-04-2016 IPR015061 Domain of unknown function DUF1882 CFF04554_RS05360 9a6e89be9f8be8cf16366cc07d3330cf 116 Pfam PF11756 Nitrous oxide-stimulated promoter 8 105 6.1E-15 T 23-04-2016 IPR020483 Uncharacterised protein family YgbA CFF04554_RS05360 9a6e89be9f8be8cf16366cc07d3330cf 116 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 52 105 1.0E-14 T 23-04-2016 IPR020483 Uncharacterised protein family YgbA CFF04554_RS03250 daf29371a70b4b802e337a853ccda459 233 SUPERFAMILY SSF140931 59 221 1.44E-19 T 23-04-2016 IPR003812 Fido domain CFF04554_RS03250 daf29371a70b4b802e337a853ccda459 233 Gene3D G3DSA:1.10.3290.10 18 222 9.2E-23 T 23-04-2016 IPR003812 Fido domain CFF04554_RS03250 daf29371a70b4b802e337a853ccda459 233 Pfam PF02661 Fic/DOC family 81 172 5.7E-7 T 23-04-2016 IPR003812 Fido domain CFF04554_RS07710 047778d299cf2a10ddbf28c20b7ffa2b 228 SUPERFAMILY SSF53167 1 228 4.45E-66 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CFF04554_RS07710 047778d299cf2a10ddbf28c20b7ffa2b 228 Pfam PF01048 Phosphorylase superfamily 2 225 4.5E-46 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CFF04554_RS07710 047778d299cf2a10ddbf28c20b7ffa2b 228 Gene3D G3DSA:3.40.50.1580 1 226 8.8E-70 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CFF04554_RS07710 047778d299cf2a10ddbf28c20b7ffa2b 228 PANTHER PTHR21234:SF16 1 228 3.8E-41 T 23-04-2016 CFF04554_RS07710 047778d299cf2a10ddbf28c20b7ffa2b 228 PANTHER PTHR21234 1 228 3.8E-41 T 23-04-2016 IPR018017 Nucleoside phosphorylase CFF04554_RS07710 047778d299cf2a10ddbf28c20b7ffa2b 228 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 226 3.0E-56 T 23-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 CFF04554_RS06160 235255ec646b1a6ccc3abdd677d33e98 507 PANTHER PTHR11059 2 507 1.2E-48 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CFF04554_RS06160 235255ec646b1a6ccc3abdd677d33e98 507 PIRSF PIRSF003128 1 507 1.8E-108 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CFF04554_RS06160 235255ec646b1a6ccc3abdd677d33e98 507 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 465 1.9E-11 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal CFF04554_RS06160 235255ec646b1a6ccc3abdd677d33e98 507 SUPERFAMILY SSF52540 1 187 2.89E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06160 235255ec646b1a6ccc3abdd677d33e98 507 SUPERFAMILY SSF52540 269 479 2.89E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06160 235255ec646b1a6ccc3abdd677d33e98 507 Gene3D G3DSA:3.40.50.300 350 489 1.6E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06160 235255ec646b1a6ccc3abdd677d33e98 507 Gene3D G3DSA:3.40.50.300 1 188 1.6E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08710 bd235d1a10b77fe662ee15c6a642c94c 275 SUPERFAMILY SSF81345 4 257 2.62E-36 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS08710 bd235d1a10b77fe662ee15c6a642c94c 275 PANTHER PTHR30477 1 256 3.1E-69 T 23-04-2016 CFF04554_RS08710 bd235d1a10b77fe662ee15c6a642c94c 275 Gene3D G3DSA:1.10.3470.10 13 270 8.3E-12 T 23-04-2016 IPR029022 ABC transporter, BtuC-like CFF04554_RS08710 bd235d1a10b77fe662ee15c6a642c94c 275 Pfam PF00950 ABC 3 transport family 7 258 3.7E-68 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 CFF04554_RS08710 bd235d1a10b77fe662ee15c6a642c94c 275 PANTHER PTHR30477:SF0 1 256 3.1E-69 T 23-04-2016 CFF04554_RS04835 480d31f25a112aeb2f1c4371e8107adf 257 Gene3D G3DSA:3.40.190.10 21 147 9.7E-54 T 23-04-2016 CFF04554_RS04835 480d31f25a112aeb2f1c4371e8107adf 257 PANTHER PTHR30429:SF0 1 257 6.9E-123 T 23-04-2016 CFF04554_RS04835 480d31f25a112aeb2f1c4371e8107adf 257 PANTHER PTHR30429 1 257 6.9E-123 T 23-04-2016 IPR004872 Lipoprotein NlpA family CFF04554_RS04835 480d31f25a112aeb2f1c4371e8107adf 257 PIRSF PIRSF002854 2 257 8.4E-101 T 23-04-2016 IPR004872 Lipoprotein NlpA family CFF04554_RS04835 480d31f25a112aeb2f1c4371e8107adf 257 Pfam PF03180 NLPA lipoprotein 23 257 7.3E-93 T 23-04-2016 IPR004872 Lipoprotein NlpA family CFF04554_RS04835 480d31f25a112aeb2f1c4371e8107adf 257 SUPERFAMILY SSF53850 23 257 1.45E-80 T 23-04-2016 CFF04554_RS04315 10edb51d896b802416e0f3d488bd26c0 370 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 140 365 1.6E-49 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CFF04554_RS04315 10edb51d896b802416e0f3d488bd26c0 370 PANTHER PTHR22939 144 367 2.7E-49 T 23-04-2016 CFF04554_RS04315 10edb51d896b802416e0f3d488bd26c0 370 PANTHER PTHR22939:SF78 144 367 2.7E-49 T 23-04-2016 CFF04554_RS04315 10edb51d896b802416e0f3d488bd26c0 370 Pfam PF02163 Peptidase family M50 25 353 1.9E-68 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 CFF04554_RS04315 10edb51d896b802416e0f3d488bd26c0 370 Gene3D G3DSA:2.30.42.10 109 206 1.9E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS04315 10edb51d896b802416e0f3d488bd26c0 370 SUPERFAMILY SSF50156 114 205 1.43E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 PANTHER PTHR30075:SF2 3 671 4.2E-216 T 23-04-2016 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 669 4.1E-201 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 3 540 1.3E-171 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 PANTHER PTHR30075 3 671 4.2E-216 T 23-04-2016 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 4 17 3.9E-30 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 311 327 3.9E-30 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 46 58 3.9E-30 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 3.9E-30 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 239 254 3.9E-30 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS04145 60694f28c44248ad01ad956110f394f6 671 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 669 21.797 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS07735 4901bd9d2e85a07a83b8318af50b49f8 421 Gene3D G3DSA:2.130.10.10 157 404 1.1E-36 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CFF04554_RS07735 4901bd9d2e85a07a83b8318af50b49f8 421 SUPERFAMILY SSF69304 172 420 1.01E-31 T 23-04-2016 CFF04554_RS07735 4901bd9d2e85a07a83b8318af50b49f8 421 Pfam PF07676 WD40-like Beta Propeller Repeat 366 389 0.013 T 23-04-2016 IPR011659 WD40-like Beta Propeller CFF04554_RS04440 2d12196d682d6d536049e13e36a587a9 209 Pfam PF00877 NlpC/P60 family 55 165 4.0E-5 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CFF04554_RS04440 2d12196d682d6d536049e13e36a587a9 209 Gene3D G3DSA:3.90.1720.10 54 159 5.4E-8 T 23-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CFF04554_RS04440 2d12196d682d6d536049e13e36a587a9 209 SUPERFAMILY SSF54001 54 156 4.46E-5 T 23-04-2016 CFF04554_RS06185 80dca15a2ce505f1932fc00cfe717080 147 PANTHER PTHR23091:SF277 3 146 4.7E-12 T 23-04-2016 CFF04554_RS06185 80dca15a2ce505f1932fc00cfe717080 147 Gene3D G3DSA:3.40.630.30 14 146 1.8E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS06185 80dca15a2ce505f1932fc00cfe717080 147 Pfam PF13673 Acetyltransferase (GNAT) domain 50 130 4.3E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 CFF04554_RS06185 80dca15a2ce505f1932fc00cfe717080 147 PANTHER PTHR23091 3 146 4.7E-12 T 23-04-2016 CFF04554_RS06185 80dca15a2ce505f1932fc00cfe717080 147 SUPERFAMILY SSF55729 14 142 1.48E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS08170 96e974f268865cdd33877e6faf4ff23e 358 Gene3D G3DSA:3.40.50.2000 181 296 2.0E-13 T 23-04-2016 CFF04554_RS08170 96e974f268865cdd33877e6faf4ff23e 358 PANTHER PTHR12526 1 355 1.6E-49 T 23-04-2016 CFF04554_RS08170 96e974f268865cdd33877e6faf4ff23e 358 Pfam PF13439 Glycosyltransferase Family 4 13 174 1.2E-9 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS08170 96e974f268865cdd33877e6faf4ff23e 358 Pfam PF00534 Glycosyl transferases group 1 180 327 1.4E-30 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS08170 96e974f268865cdd33877e6faf4ff23e 358 SUPERFAMILY SSF53756 10 354 5.93E-57 T 23-04-2016 CFF04554_RS00310 1bf0e6c568c7acebac26df6756622191 182 Gene3D G3DSA:1.25.40.10 4 100 5.5E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS07220 5066b4eb52b2bca44fada782546591f3 76 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 4 49 1.7E-9 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type CFF04554_RS07220 5066b4eb52b2bca44fada782546591f3 76 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 4 45 4.0E-12 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type CFF04554_RS00170 d11a50ea34c106b8ab045d225c647f9b 204 Gene3D G3DSA:3.40.1370.10 56 201 1.0E-44 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00170 d11a50ea34c106b8ab045d225c647f9b 204 PANTHER PTHR10746 1 201 2.5E-50 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CFF04554_RS00170 d11a50ea34c106b8ab045d225c647f9b 204 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 204 25.589 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CFF04554_RS00170 d11a50ea34c106b8ab045d225c647f9b 204 SUPERFAMILY SSF52166 1 201 7.33E-60 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00170 d11a50ea34c106b8ab045d225c647f9b 204 Pfam PF00573 Ribosomal protein L4/L1 family 24 201 2.2E-52 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CFF04554_RS00170 d11a50ea34c106b8ab045d225c647f9b 204 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 24 201 3.3E-60 T 23-04-2016 IPR013005 50S ribosomal protein uL4 CFF04554_RS01550 c865610e73da2c3b2a6a9020590e284a 161 SUPERFAMILY SSF52833 11 159 1.24E-50 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS01550 c865610e73da2c3b2a6a9020590e284a 161 Gene3D G3DSA:3.40.30.10 10 160 4.8E-52 T 23-04-2016 IPR012336 Thioredoxin-like fold CFF04554_RS01550 c865610e73da2c3b2a6a9020590e284a 161 PANTHER PTHR10681 11 159 7.1E-50 T 23-04-2016 CFF04554_RS01550 c865610e73da2c3b2a6a9020590e284a 161 Pfam PF00578 AhpC/TSA family 14 141 2.5E-41 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CFF04554_RS01550 c865610e73da2c3b2a6a9020590e284a 161 PIRSF PIRSF000239 6 156 3.2E-29 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 CFF04554_RS03045 904403ebddeb8df673d6c5f5ad56224f 268 Pfam PF00795 Carbon-nitrogen hydrolase 21 251 9.8E-20 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS03045 904403ebddeb8df673d6c5f5ad56224f 268 SUPERFAMILY SSF56317 3 256 2.35E-40 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS03045 904403ebddeb8df673d6c5f5ad56224f 268 PANTHER PTHR23088 3 256 8.3E-24 T 23-04-2016 CFF04554_RS03045 904403ebddeb8df673d6c5f5ad56224f 268 Gene3D G3DSA:3.60.110.10 2 259 1.5E-49 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CFF04554_RS08645 855d207a73d143b94bc4488f6447cd6b 120 Pfam PF05154 TM2 domain 1 52 2.8E-12 T 23-04-2016 IPR007829 TM2 domain CFF04554_RS01360 535042a5b5512d28a2088e0b51ea6352 215 PANTHER PTHR12677 8 210 9.5E-22 T 23-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 CFF04554_RS01360 535042a5b5512d28a2088e0b51ea6352 215 Pfam PF09335 SNARE associated Golgi protein 60 173 4.0E-25 T 23-04-2016 IPR032816 SNARE associated Golgi protein CFF04554_RS09300 1436731ef9f5eb138cf9b7e1d8fe52a5 533 Pfam PF02120 Flagellar hook-length control protein FliK 418 497 5.4E-16 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 PANTHER PTHR30531:SF0 2 357 1.8E-123 T 23-04-2016 CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 5 348 5.8E-132 T 23-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 344 1.6E-124 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 SUPERFAMILY SSF160544 241 345 3.53E-41 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 PANTHER PTHR30531 2 357 1.8E-123 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 8 30 2.6E-44 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 299 320 2.6E-44 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 225 242 2.6E-44 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 269 284 2.6E-44 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 205 223 2.6E-44 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CFF04554_RS01720 e1884ec6b263ecfdb3ee6049da190fd0 357 Gene3D G3DSA:3.40.1690.10 215 352 1.7E-62 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CFF04554_RS08815 d801f8d793ce3033652c64c8b2e4ad6d 481 PANTHER PTHR13285 1 432 1.9E-138 T 23-04-2016 CFF04554_RS08815 d801f8d793ce3033652c64c8b2e4ad6d 481 PANTHER PTHR13285:SF23 1 432 1.9E-138 T 23-04-2016 CFF04554_RS08815 d801f8d793ce3033652c64c8b2e4ad6d 481 PIRSF PIRSF016636 1 481 1.2E-148 T 23-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CFF04554_RS08815 d801f8d793ce3033652c64c8b2e4ad6d 481 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 142 372 2.0E-35 T 23-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT CFF04554_RS08815 d801f8d793ce3033652c64c8b2e4ad6d 481 PIRSF PIRSF500217 1 481 5.5E-145 T 23-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 SUPERFAMILY SSF54862 1 181 8.06E-49 T 23-04-2016 CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 Pfam PF13247 4Fe-4S dicluster domain 55 165 1.2E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 PANTHER PTHR11938 142 166 2.6E-63 T 23-04-2016 CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 PANTHER PTHR11938 1 124 2.6E-63 T 23-04-2016 CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 PANTHER PTHR11938:SF96 142 166 2.6E-63 T 23-04-2016 CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 PANTHER PTHR11938:SF96 1 124 2.6E-63 T 23-04-2016 CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 Gene3D G3DSA:3.30.70.20 119 178 2.7E-21 T 23-04-2016 CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 Gene3D G3DSA:3.30.70.20 3 63 2.7E-21 T 23-04-2016 CFF04554_RS07835 931e5ad239ee6c075378db27623d73a7 184 Gene3D G3DSA:3.30.70.20 64 108 1.7E-21 T 23-04-2016 CFF04554_RS03820 a1fb00ae3c4ca4aa1913fdb622ea9248 419 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 163 342 3.4E-10 T 23-04-2016 IPR004477 ComEC/Rec2-related protein CFF04554_RS03820 a1fb00ae3c4ca4aa1913fdb622ea9248 419 Pfam PF03772 Competence protein 149 414 4.3E-20 T 23-04-2016 IPR004477 ComEC/Rec2-related protein CFF04554_RS05635 8ae073b42406f4f8a1f53d962b69b3ca 523 SUPERFAMILY SSF46689 2 50 5.38E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS05635 8ae073b42406f4f8a1f53d962b69b3ca 523 Pfam PF03237 Terminase-like family 141 508 1.7E-30 T 23-04-2016 IPR004921 Terminase, large subunit CFF04554_RS05635 8ae073b42406f4f8a1f53d962b69b3ca 523 Gene3D G3DSA:1.10.10.60 4 65 7.4E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 PANTHER PTHR10031 25 96 1.2E-15 T 23-04-2016 CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 ProSitePatterns PS00605 ATP synthase c subunit signature. 58 79 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 PRINTS PR00124 ATP synthase C subunit signature 68 93 1.2E-14 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 PRINTS PR00124 ATP synthase C subunit signature 51 66 1.2E-14 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 PRINTS PR00124 ATP synthase C subunit signature 30 49 1.2E-14 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 38 95 7.3E-14 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 Hamap MF_01396 ATP synthase subunit c [atpH]. 27 95 15.945 T 23-04-2016 CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 SUPERFAMILY SSF81333 23 97 1.44E-18 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 Gene3D G3DSA:1.20.20.10 27 94 1.1E-21 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CFF04554_RS06590 ed7bd84566d07bea33aed60bf84bd338 100 Pfam PF00137 ATP synthase subunit C 30 91 4.2E-13 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CFF04554_RS02395 7f5852f00dab16841a6337e4224bddab 73 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 39 3.4E-9 T 23-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CFF04554_RS02395 7f5852f00dab16841a6337e4224bddab 73 SUPERFAMILY SSF47598 2 41 2.45E-10 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 CFF04554_RS07325 bfe72155a11505fd98e2f4eb8e9cdb21 257 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 251 4.3E-62 T 23-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CFF04554_RS07325 bfe72155a11505fd98e2f4eb8e9cdb21 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 2.3E-22 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CFF04554_RS07325 bfe72155a11505fd98e2f4eb8e9cdb21 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 2.3E-22 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CFF04554_RS07325 bfe72155a11505fd98e2f4eb8e9cdb21 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 2.3E-22 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CFF04554_RS07325 bfe72155a11505fd98e2f4eb8e9cdb21 257 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 2.3E-22 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CFF04554_RS07325 bfe72155a11505fd98e2f4eb8e9cdb21 257 PANTHER PTHR30065:SF1 1 257 5.6E-49 T 23-04-2016 CFF04554_RS07325 bfe72155a11505fd98e2f4eb8e9cdb21 257 PANTHER PTHR30065 1 257 5.6E-49 T 23-04-2016 CFF04554_RS07325 bfe72155a11505fd98e2f4eb8e9cdb21 257 Pfam PF01311 Bacterial export proteins, family 1 13 247 9.4E-57 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CFF04554_RS05840 f00eab175f2631d4ae02c82507a50795 330 SUPERFAMILY SSF52540 4 194 1.27E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03180 17bd16510d28147668b5d150b85e2972 245 PANTHER PTHR30283 2 216 2.0E-15 T 23-04-2016 CFF04554_RS03180 17bd16510d28147668b5d150b85e2972 245 PANTHER PTHR30283:SF3 2 216 2.0E-15 T 23-04-2016 CFF04554_RS03180 17bd16510d28147668b5d150b85e2972 245 Pfam PF03883 Protein of unknown function (DUF328) 2 227 1.2E-36 T 23-04-2016 IPR005583 Peroxide stress protein YaaA CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 285 58.741 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 Gene3D G3DSA:1.20.58.180 209 282 4.5E-32 T 23-04-2016 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 245 261 1.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 Gene3D G3DSA:3.30.930.10 1 207 2.1E-100 T 23-04-2016 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 281 3.8E-145 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 282 3.3E-152 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 SUPERFAMILY SSF55681 1 283 6.46E-128 T 23-04-2016 CFF04554_RS05185 9becc7e4b1d3f97aea458b97af49b4a4 285 PANTHER PTHR30075 1 279 1.3E-212 T 23-04-2016 CFF04554_RS05655 a11769bcb2bf8f7caaa1cc67974ada00 74 Gene3D G3DSA:1.10.260.40 6 40 6.3E-5 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CFF04554_RS03720 6f9b47c23c749ab922d29c10522f142d 133 Gene3D G3DSA:2.40.50.200 33 132 1.7E-32 T 23-04-2016 IPR005220 Bacterial OB-fold CFF04554_RS03720 6f9b47c23c749ab922d29c10522f142d 133 PANTHER PTHR36571:SF1 2 132 1.1E-34 T 23-04-2016 CFF04554_RS03720 6f9b47c23c749ab922d29c10522f142d 133 PANTHER PTHR36571 2 132 1.1E-34 T 23-04-2016 CFF04554_RS03720 6f9b47c23c749ab922d29c10522f142d 133 Pfam PF04076 Bacterial OB fold (BOF) protein 33 130 1.7E-26 T 23-04-2016 IPR005220 Bacterial OB-fold CFF04554_RS03720 6f9b47c23c749ab922d29c10522f142d 133 SUPERFAMILY SSF101756 34 130 5.62E-28 T 23-04-2016 IPR005220 Bacterial OB-fold CFF04554_RS05915 f91fd5e2c0a98b1a98afd603b72f4296 353 PANTHER PTHR30486:SF6 1 350 4.5E-146 T 23-04-2016 CFF04554_RS05915 f91fd5e2c0a98b1a98afd603b72f4296 353 Gene3D G3DSA:3.40.50.300 101 344 6.0E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05915 f91fd5e2c0a98b1a98afd603b72f4296 353 Pfam PF00437 Type II/IV secretion system protein 9 266 3.5E-44 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CFF04554_RS05915 f91fd5e2c0a98b1a98afd603b72f4296 353 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 345 1.5E-133 T 23-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CFF04554_RS05915 f91fd5e2c0a98b1a98afd603b72f4296 353 PANTHER PTHR30486 1 350 4.5E-146 T 23-04-2016 CFF04554_RS05915 f91fd5e2c0a98b1a98afd603b72f4296 353 SUPERFAMILY SSF52540 5 339 1.64E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06575 aff62e995073bb4001c3efd48348d882 136 SUPERFAMILY SSF54637 5 127 1.42E-34 T 23-04-2016 IPR029069 HotDog domain CFF04554_RS06575 aff62e995073bb4001c3efd48348d882 136 PANTHER PTHR11049:SF5 5 124 1.2E-36 T 23-04-2016 CFF04554_RS06575 aff62e995073bb4001c3efd48348d882 136 Gene3D G3DSA:3.10.129.10 7 125 4.6E-35 T 23-04-2016 IPR029069 HotDog domain CFF04554_RS06575 aff62e995073bb4001c3efd48348d882 136 Pfam PF03061 Thioesterase superfamily 22 90 1.9E-15 T 23-04-2016 IPR006683 Thioesterase domain CFF04554_RS06575 aff62e995073bb4001c3efd48348d882 136 PANTHER PTHR11049 5 124 1.2E-36 T 23-04-2016 CFF04554_RS05930 7236c110dae45f68c4b3d01161d981e1 335 Gene3D G3DSA:2.140.10.10 110 242 6.1E-7 T 23-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain CFF04554_RS05930 7236c110dae45f68c4b3d01161d981e1 335 SUPERFAMILY SSF50978 83 206 1.37E-8 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CFF04554_RS05930 7236c110dae45f68c4b3d01161d981e1 335 SUPERFAMILY SSF50978 242 298 1.37E-8 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CFF04554_RS04370 08cc0bc0e95520702282535d06c3954b 348 PANTHER PTHR34219 1 348 1.2E-59 T 23-04-2016 CFF04554_RS04370 08cc0bc0e95520702282535d06c3954b 348 Pfam PF03929 PepSY-associated TM region 7 346 2.4E-44 T 23-04-2016 IPR005625 PepSY-associated TM protein CFF04554_RS04370 08cc0bc0e95520702282535d06c3954b 348 PANTHER PTHR34219:SF3 1 348 1.2E-59 T 23-04-2016 CFF04554_RS00410 8403a5d3dc7a71e0888cf2ac3326e035 126 Gene3D G3DSA:3.30.428.10 16 114 4.2E-19 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CFF04554_RS00410 8403a5d3dc7a71e0888cf2ac3326e035 126 SUPERFAMILY SSF54197 2 99 1.1E-19 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 CFF04554_RS03695 8bc1fb993bff912924e4c3611c55fcd6 137 PANTHER PTHR35024:SF2 13 136 1.0E-25 T 23-04-2016 CFF04554_RS03695 8bc1fb993bff912924e4c3611c55fcd6 137 PANTHER PTHR35024 13 136 1.0E-25 T 23-04-2016 CFF04554_RS03695 8bc1fb993bff912924e4c3611c55fcd6 137 Pfam PF04519 Polymer-forming cytoskeletal 16 111 2.8E-24 T 23-04-2016 IPR007607 Protein of unknown function DUF583 CFF04554_RS06915 14d0fcc6cff598db428533e6fefadfaf 364 Gene3D G3DSA:3.40.640.10 4 244 1.9E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CFF04554_RS06915 14d0fcc6cff598db428533e6fefadfaf 364 Gene3D G3DSA:3.90.1150.10 247 363 1.7E-38 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CFF04554_RS06915 14d0fcc6cff598db428533e6fefadfaf 364 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 360 2.6E-87 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS06915 14d0fcc6cff598db428533e6fefadfaf 364 PIRSF PIRSF000390 1 364 3.2E-90 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS06915 14d0fcc6cff598db428533e6fefadfaf 364 PANTHER PTHR30244:SF18 1 364 1.3E-122 T 23-04-2016 CFF04554_RS06915 14d0fcc6cff598db428533e6fefadfaf 364 SUPERFAMILY SSF53383 5 362 1.57E-93 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS06915 14d0fcc6cff598db428533e6fefadfaf 364 PANTHER PTHR30244 1 364 1.3E-122 T 23-04-2016 CFF04554_RS03805 3893042aed6d466cf6845c71d4defa8d 402 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 382 1.2E-52 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CFF04554_RS03805 3893042aed6d466cf6845c71d4defa8d 402 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 268 4.8E-22 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFF04554_RS03805 3893042aed6d466cf6845c71d4defa8d 402 PANTHER PTHR30572 36 385 2.4E-69 T 23-04-2016 CFF04554_RS03805 3893042aed6d466cf6845c71d4defa8d 402 Gene3D G3DSA:2.40.50.100 185 217 6.5E-20 T 23-04-2016 CFF04554_RS03805 3893042aed6d466cf6845c71d4defa8d 402 Gene3D G3DSA:2.40.50.100 64 96 6.5E-20 T 23-04-2016 CFF04554_RS03805 3893042aed6d466cf6845c71d4defa8d 402 PANTHER PTHR30572:SF3 36 385 2.4E-69 T 23-04-2016 CFF04554_RS03805 3893042aed6d466cf6845c71d4defa8d 402 SUPERFAMILY SSF111369 50 265 6.8E-25 T 23-04-2016 CFF04554_RS06545 01cf2f1fdd780f5817ca01f054973ae1 231 SUPERFAMILY SSF101386 1 229 1.35E-73 T 23-04-2016 CFF04554_RS06545 01cf2f1fdd780f5817ca01f054973ae1 231 Pfam PF08761 dUTPase 7 187 7.5E-33 T 23-04-2016 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 CFF04554_RS03755 081ce8785f6788882b6d0cecd132f04f 341 PANTHER PTHR33529 1 331 1.0E-21 T 23-04-2016 CFF04554_RS03755 081ce8785f6788882b6d0cecd132f04f 341 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 311 1.5E-34 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 CFF04554_RS05190 a854ecc9aca5ef562b2d5f95e020bfee 156 Pfam PF13118 Protein of unknown function (DUF3972) 9 131 1.5E-50 T 23-04-2016 IPR025002 Domain of unknown function DUF3972 CFF04554_RS05265 a98a609b38882ae635efa3fea599654b 409 PANTHER PTHR30536 10 409 7.2E-145 T 23-04-2016 CFF04554_RS05265 a98a609b38882ae635efa3fea599654b 409 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 20 406 1.5E-142 T 23-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CFF04554_RS05265 a98a609b38882ae635efa3fea599654b 409 PANTHER PTHR30536:SF5 10 409 7.2E-145 T 23-04-2016 CFF04554_RS07680 692896c33035dc9bf0f845ad28c61d22 289 PANTHER PTHR13696:SF3 1 273 6.6E-58 T 23-04-2016 CFF04554_RS07680 692896c33035dc9bf0f845ad28c61d22 289 SUPERFAMILY SSF52540 23 281 2.06E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07680 692896c33035dc9bf0f845ad28c61d22 289 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 207 1.5E-31 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CFF04554_RS07680 692896c33035dc9bf0f845ad28c61d22 289 PANTHER PTHR13696 1 273 6.6E-58 T 23-04-2016 CFF04554_RS07680 692896c33035dc9bf0f845ad28c61d22 289 PIRSF PIRSF003092 3 289 3.7E-71 T 23-04-2016 IPR025501 ATP binding protein MinD CFF04554_RS07680 692896c33035dc9bf0f845ad28c61d22 289 Gene3D G3DSA:3.40.50.300 21 262 2.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07985 4cdc2dee3fef7f85571ef59d9c123ea6 145 Pfam PF10788 Protein of unknown function (DUF2603) 7 137 1.5E-46 T 23-04-2016 IPR019724 Uncharacterised protein family UPF0763 CFF04554_RS07985 4cdc2dee3fef7f85571ef59d9c123ea6 145 Hamap MF_02110 UPF0763 protein . 4 145 25.222 T 23-04-2016 IPR019724 Uncharacterised protein family UPF0763 CFF04554_RS00830 2854e22bbeaf33151c485df80438fdde 102 PANTHER PTHR11434 1 97 4.0E-27 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CFF04554_RS00830 2854e22bbeaf33151c485df80438fdde 102 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 98 17.364 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CFF04554_RS00830 2854e22bbeaf33151c485df80438fdde 102 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 4 91 5.0E-21 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CFF04554_RS00425 717164e4b825f33a60f2e0e6f9f33a64 204 Pfam PF04301 Protein of unknown function (DUF452) 1 196 4.1E-28 T 23-04-2016 IPR007398 Protein of unknown function DUF452 CFF04554_RS03290 244c3abc824807129e77507c34fb2546 449 Gene3D G3DSA:3.40.50.300 19 110 6.2E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03290 244c3abc824807129e77507c34fb2546 449 Pfam PF00271 Helicase conserved C-terminal domain 28 101 8.4E-6 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS03290 244c3abc824807129e77507c34fb2546 449 SMART SM00490 12 101 3.4E-4 T 23-04-2016 IPR001650 Helicase, C-terminal CFF04554_RS03290 244c3abc824807129e77507c34fb2546 449 SUPERFAMILY SSF52540 16 149 6.33E-18 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08075 3ad86cfc07201c68288cfa5ca375b5ce 219 Pfam PF13847 Methyltransferase domain 73 207 4.3E-17 T 23-04-2016 IPR025714 Methyltransferase domain CFF04554_RS08075 3ad86cfc07201c68288cfa5ca375b5ce 219 PANTHER PTHR10108 54 164 1.4E-13 T 23-04-2016 CFF04554_RS08075 3ad86cfc07201c68288cfa5ca375b5ce 219 PANTHER PTHR10108:SF705 54 164 1.4E-13 T 23-04-2016 CFF04554_RS08075 3ad86cfc07201c68288cfa5ca375b5ce 219 Gene3D G3DSA:3.40.50.150 36 209 5.0E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08075 3ad86cfc07201c68288cfa5ca375b5ce 219 SUPERFAMILY SSF53335 29 210 2.84E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02195 bda54613a27dd4941dcb49b9f84690d5 288 SUPERFAMILY SSF50978 220 286 3.0E-12 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CFF04554_RS02195 bda54613a27dd4941dcb49b9f84690d5 288 SUPERFAMILY SSF50978 22 187 3.0E-12 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CFF04554_RS02195 bda54613a27dd4941dcb49b9f84690d5 288 Gene3D G3DSA:2.130.10.10 108 274 1.3E-4 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CFF04554_RS05000 9aa779cfdcc360141d07c944cb98b055 271 SMART SM00382 40 179 2.7E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS05000 9aa779cfdcc360141d07c944cb98b055 271 Gene3D G3DSA:3.40.50.300 33 174 6.4E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05000 9aa779cfdcc360141d07c944cb98b055 271 SUPERFAMILY SSF52540 32 244 1.47E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05000 9aa779cfdcc360141d07c944cb98b055 271 Pfam PF13401 AAA domain 43 156 1.2E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain CFF04554_RS00165 e956e749319869abc564087d02dc5105 192 Pfam PF00297 Ribosomal protein L3 93 161 1.9E-11 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00165 e956e749319869abc564087d02dc5105 192 SUPERFAMILY SSF50447 3 189 7.59E-47 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain CFF04554_RS00165 e956e749319869abc564087d02dc5105 192 PANTHER PTHR11229 96 189 4.5E-41 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS00165 e956e749319869abc564087d02dc5105 192 Gene3D G3DSA:4.10.960.10 86 150 3.4E-24 T 23-04-2016 CFF04554_RS00165 e956e749319869abc564087d02dc5105 192 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 189 1.4E-51 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CFF04554_RS02545 0f0da39f8f1a445678b8b770b1af219e 441 Pfam PF01618 MotA/TolQ/ExbB proton channel family 125 208 1.2E-7 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CFF04554_RS00375 730864f4107952b537269400238eaf18 253 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 245 1.1E-99 T 23-04-2016 CFF04554_RS00375 730864f4107952b537269400238eaf18 253 PANTHER PTHR34266 1 250 4.2E-126 T 23-04-2016 CFF04554_RS00375 730864f4107952b537269400238eaf18 253 SUPERFAMILY SSF110399 2 233 6.28E-72 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 CFF04554_RS00375 730864f4107952b537269400238eaf18 253 Gene3D G3DSA:3.20.20.70 6 250 3.0E-51 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CFF04554_RS02285 2ff283c8fafda1919339d9a10664ab6c 341 Pfam PF06250 Protein of unknown function (DUF1016) 13 329 2.3E-103 T 23-04-2016 IPR009362 Protein of unknown function DUF1016 CFF04554_RS02285 2ff283c8fafda1919339d9a10664ab6c 341 PANTHER PTHR30547 1 340 8.2E-113 T 23-04-2016 CFF04554_RS02285 2ff283c8fafda1919339d9a10664ab6c 341 PANTHER PTHR30547:SF5 1 340 8.2E-113 T 23-04-2016 CFF04554_RS03790 d4785aa5637541a2733dc1f910a5ea93 284 SUPERFAMILY SSF103481 64 141 2.62E-6 T 23-04-2016 CFF04554_RS07145 d514f5e6f6b8f891a3a66d914a159081 368 PANTHER PTHR12526 157 366 3.8E-12 T 23-04-2016 CFF04554_RS07145 d514f5e6f6b8f891a3a66d914a159081 368 Gene3D G3DSA:3.40.50.2000 201 337 8.9E-8 T 23-04-2016 CFF04554_RS07145 d514f5e6f6b8f891a3a66d914a159081 368 SUPERFAMILY SSF53756 4 366 1.38E-28 T 23-04-2016 CFF04554_RS07145 d514f5e6f6b8f891a3a66d914a159081 368 Pfam PF00534 Glycosyl transferases group 1 197 335 2.9E-15 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 CFF04554_RS01780 b97d151f329c88d8a76e1acc9fcf9aa0 139 SUPERFAMILY SSF103039 39 114 5.1E-5 T 23-04-2016 IPR028976 CheC-like domain CFF04554_RS09310 f9c320111bee3794cf2c915e7fd84a98 1157 PRINTS PR00313 NodO calcium binding signature 420 428 1.4E-7 T 23-04-2016 CFF04554_RS09310 f9c320111bee3794cf2c915e7fd84a98 1157 PRINTS PR00313 NodO calcium binding signature 440 448 1.4E-7 T 23-04-2016 CFF04554_RS09310 f9c320111bee3794cf2c915e7fd84a98 1157 PRINTS PR00313 NodO calcium binding signature 853 862 1.4E-7 T 23-04-2016 CFF04554_RS09310 f9c320111bee3794cf2c915e7fd84a98 1157 PRINTS PR00313 NodO calcium binding signature 232 243 1.4E-7 T 23-04-2016 CFF04554_RS03735 c512067aff721cf5864ebdbcd3a6de3e 785 SUPERFAMILY SSF51126 3 140 5.65E-11 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor CFF04554_RS03735 c512067aff721cf5864ebdbcd3a6de3e 785 Gene3D G3DSA:2.160.20.10 3 166 2.7E-18 T 23-04-2016 IPR012334 Pectin lyase fold CFF04554_RS03735 c512067aff721cf5864ebdbcd3a6de3e 785 Gene3D G3DSA:2.160.20.10 187 262 9.5E-4 T 23-04-2016 IPR012334 Pectin lyase fold CFF04554_RS01300 23f3171bda327092f083a3361eb6065f 357 Pfam PF12698 ABC-2 family transporter protein 25 349 5.2E-41 T 23-04-2016 CFF04554_RS01300 23f3171bda327092f083a3361eb6065f 357 PANTHER PTHR30294:SF17 1 349 4.3E-85 T 23-04-2016 CFF04554_RS01300 23f3171bda327092f083a3361eb6065f 357 PANTHER PTHR30294 1 349 4.3E-85 T 23-04-2016 CFF04554_RS04255 e41299f2b23149a8902314adbddf28c9 128 PANTHER PTHR30558 1 121 1.3E-18 T 23-04-2016 CFF04554_RS04255 e41299f2b23149a8902314adbddf28c9 128 TIGRFAM TIGR02804 ExbD_2: TonB system transport protein ExbD 7 124 1.0E-39 T 23-04-2016 IPR014171 TonB system transport protein ExbD type-2 GO:0006810|GO:0016020 CFF04554_RS04255 e41299f2b23149a8902314adbddf28c9 128 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 123 4.3E-21 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CFF04554_RS03555 ec8b551cf2bd66b2313de5f6ce10e1d0 284 Gene3D G3DSA:3.90.640.20 205 282 2.7E-6 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 CFF04554_RS06550 3a497318b643b6b5ad30a35ff1447925 238 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 219 7.8E-16 T 23-04-2016 CFF04554_RS08730 83ff6c4d881735702eada53cd952338a 116 Gene3D G3DSA:1.10.10.10 3 74 6.2E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS08730 83ff6c4d881735702eada53cd952338a 116 Pfam PF01475 Ferric uptake regulator family 12 98 2.0E-9 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CFF04554_RS08730 83ff6c4d881735702eada53cd952338a 116 SUPERFAMILY SSF46785 2 106 2.55E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CFF04554_RS07595 601502a73907ef044676a79b6a73dd39 122 Pfam PF02033 Ribosome-binding factor A 9 110 1.9E-12 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 CFF04554_RS07595 601502a73907ef044676a79b6a73dd39 122 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 23-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CFF04554_RS07595 601502a73907ef044676a79b6a73dd39 122 SUPERFAMILY SSF89919 8 101 4.84E-15 T 23-04-2016 IPR023799 Ribosome-binding factor A domain CFF04554_RS07595 601502a73907ef044676a79b6a73dd39 122 Gene3D G3DSA:3.30.300.20 7 116 4.2E-17 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta CFF04554_RS04570 8be162d61129f02c525d1563f2c7e069 357 Pfam PF03595 Voltage-dependent anion channel 45 345 8.5E-57 T 23-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CFF04554_RS04570 8be162d61129f02c525d1563f2c7e069 357 PANTHER PTHR37955:SF1 35 357 3.3E-31 T 23-04-2016 CFF04554_RS04570 8be162d61129f02c525d1563f2c7e069 357 PANTHER PTHR37955 35 357 3.3E-31 T 23-04-2016 CFF04554_RS06075 595e2655e5a0dfd9cc75882a267a3067 95 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 20 68 7.8E-11 T 23-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter CFF04554_RS01750 79783565813a6e473131d051d39462cf 168 Pfam PF03625 Domain of unknown function DUF302 77 136 7.6E-15 T 23-04-2016 IPR005180 Domain of unknown function DUF302 CFF04554_RS01750 79783565813a6e473131d051d39462cf 168 SUPERFAMILY SSF103247 49 166 3.92E-28 T 23-04-2016 IPR005180 Domain of unknown function DUF302 CFF04554_RS01750 79783565813a6e473131d051d39462cf 168 Gene3D G3DSA:3.30.310.70 42 161 3.0E-28 T 23-04-2016 IPR005180 Domain of unknown function DUF302 CFF04554_RS01870 a54a8f9de898e94a7d48d12fccd4cd28 183 Pfam PF04368 Protein of unknown function (DUF507) 1 182 2.9E-73 T 23-04-2016 IPR007463 Protein of unknown function DUF507 CFF04554_RS04340 d81715b1fb368f92fe230b165f4c9add 253 PRINTS PR00813 Bacterial general secretion pathway protein G signature 51 69 2.4E-11 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CFF04554_RS04340 d81715b1fb368f92fe230b165f4c9add 253 PRINTS PR00813 Bacterial general secretion pathway protein G signature 15 40 2.4E-11 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CFF04554_RS04340 d81715b1fb368f92fe230b165f4c9add 253 SUPERFAMILY SSF54523 16 70 3.77E-10 T 23-04-2016 CFF04554_RS00435 3e51b91ec6970faa604b92b72acd5c52 140 Gene3D G3DSA:3.40.50.880 2 96 5.1E-6 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS00435 3e51b91ec6970faa604b92b72acd5c52 140 SUPERFAMILY SSF52317 2 132 1.92E-8 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01640 aadbbe9efebd447096a40ce4a71f27ed 343 PANTHER PTHR30372:SF0 40 310 2.3E-49 T 23-04-2016 CFF04554_RS01640 aadbbe9efebd447096a40ce4a71f27ed 343 SUPERFAMILY SSF53756 1 269 2.2E-10 T 23-04-2016 CFF04554_RS01640 aadbbe9efebd447096a40ce4a71f27ed 343 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 306 2.2E-72 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CFF04554_RS01640 aadbbe9efebd447096a40ce4a71f27ed 343 Pfam PF02684 Lipid-A-disaccharide synthetase 3 303 2.6E-78 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CFF04554_RS01640 aadbbe9efebd447096a40ce4a71f27ed 343 PANTHER PTHR30372 40 310 2.3E-49 T 23-04-2016 CFF04554_RS00495 7cbc64ba4fdcaf15d58fe8eba68d467d 144 Pfam PF05130 FlgN protein 3 132 8.9E-10 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CFF04554_RS07470 7266b77bad1ee10c96f1d40394bfa009 74 SUPERFAMILY SSF47336 5 72 1.58E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CFF04554_RS07470 7266b77bad1ee10c96f1d40394bfa009 74 Gene3D G3DSA:1.10.1200.10 4 71 5.2E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain CFF04554_RS01320 32ef6c02efd51f61aefb532569e96f62 265 Pfam PF02108 Flagellar assembly protein FliH 136 259 1.5E-20 T 23-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CFF04554_RS07120 2085c21c847c9f5a24ed73ebd690b8d6 294 PIRSF PIRSF026649 2 294 2.8E-59 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CFF04554_RS07120 2085c21c847c9f5a24ed73ebd690b8d6 294 PANTHER PTHR30606:SF2 4 294 3.0E-50 T 23-04-2016 CFF04554_RS07120 2085c21c847c9f5a24ed73ebd690b8d6 294 PANTHER PTHR30606 4 294 3.0E-50 T 23-04-2016 CFF04554_RS07120 2085c21c847c9f5a24ed73ebd690b8d6 294 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 6 286 1.8E-52 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CFF04554_RS09110 d12853dbe9a6411aa160e31a081219fe 319 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 114 128 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS09110 d12853dbe9a6411aa160e31a081219fe 319 PANTHER PTHR11079 186 312 3.9E-37 T 23-04-2016 CFF04554_RS09110 d12853dbe9a6411aa160e31a081219fe 319 PANTHER PTHR11079 115 160 3.9E-37 T 23-04-2016 CFF04554_RS09110 d12853dbe9a6411aa160e31a081219fe 319 SUPERFAMILY SSF55120 205 301 1.09E-47 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS09110 d12853dbe9a6411aa160e31a081219fe 319 SUPERFAMILY SSF55120 63 178 1.09E-47 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS09110 d12853dbe9a6411aa160e31a081219fe 319 Pfam PF00849 RNA pseudouridylate synthase 79 249 1.8E-26 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CFF04554_RS00960 ac3155266a15612e5575a07c95d84c38 148 Gene3D G3DSA:3.90.1170.40 4 144 3.6E-32 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS00960 ac3155266a15612e5575a07c95d84c38 148 SUPERFAMILY SSF54690 11 142 8.37E-31 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS00960 ac3155266a15612e5575a07c95d84c38 148 Pfam PF02391 MoaE protein 23 117 3.9E-14 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CFF04554_RS09045 676e428dd3a13559ca8c54cb056eda77 144 Pfam PF07681 DoxX 20 100 1.4E-15 T 23-04-2016 IPR032808 DoxX family CFF04554_RS09045 676e428dd3a13559ca8c54cb056eda77 144 PANTHER PTHR33452 1 144 5.6E-24 T 23-04-2016 CFF04554_RS01930 1662344a88e1c6b2babc865a210361bf 786 Pfam PF12705 PD-(D/E)XK nuclease superfamily 566 782 1.6E-31 T 23-04-2016 CFF04554_RS01930 1662344a88e1c6b2babc865a210361bf 786 SUPERFAMILY SSF52540 240 528 1.77E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00490 f94d66675a6d17ab469b199fd9778ad8 67 SUPERFAMILY SSF101498 22 65 2.09E-9 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CFF04554_RS00490 f94d66675a6d17ab469b199fd9778ad8 67 Pfam PF04316 Anti-sigma-28 factor, FlgM 20 64 6.2E-10 T 23-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CFF04554_RS08775 7491f7ae6cba04778a9b5782f53bb8e8 141 SUPERFAMILY SSF53098 3 133 1.05E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS08775 7491f7ae6cba04778a9b5782f53bb8e8 141 Hamap MF_00042 Ribonuclease H [rnhA]. 1 141 26.012 T 23-04-2016 IPR022892 Ribonuclease H GO:0004523 CFF04554_RS08775 7491f7ae6cba04778a9b5782f53bb8e8 141 Pfam PF00075 RNase H 3 135 3.2E-41 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CFF04554_RS08775 7491f7ae6cba04778a9b5782f53bb8e8 141 PANTHER PTHR10642 4 133 7.6E-33 T 23-04-2016 CFF04554_RS08775 7491f7ae6cba04778a9b5782f53bb8e8 141 Gene3D G3DSA:3.30.420.10 3 137 5.0E-47 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS01810 6596a7f173d4d3b847d9e663f4151e12 124 Gene3D G3DSA:2.40.50.100 59 113 9.5E-4 T 23-04-2016 CFF04554_RS01810 6596a7f173d4d3b847d9e663f4151e12 124 SUPERFAMILY SSF50331 26 120 3.8E-8 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal CFF04554_RS02885 270fbc35ae7f5dd6cadb66771f286b7e 147 Pfam PF00156 Phosphoribosyl transferase domain 7 147 2.3E-22 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CFF04554_RS02885 270fbc35ae7f5dd6cadb66771f286b7e 147 SUPERFAMILY SSF53271 2 139 1.04E-24 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS02885 270fbc35ae7f5dd6cadb66771f286b7e 147 Gene3D G3DSA:3.40.50.2020 2 144 3.3E-27 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like CFF04554_RS01715 448064014ab290df8a8d22769b306f93 208 SUPERFAMILY SSF55469 1 205 1.02E-54 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CFF04554_RS01715 448064014ab290df8a8d22769b306f93 208 Gene3D G3DSA:3.40.109.10 1 207 4.5E-67 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 CFF04554_RS01715 448064014ab290df8a8d22769b306f93 208 PANTHER PTHR23026 1 206 9.5E-46 T 23-04-2016 CFF04554_RS01715 448064014ab290df8a8d22769b306f93 208 PANTHER PTHR23026:SF101 1 206 9.5E-46 T 23-04-2016 CFF04554_RS01715 448064014ab290df8a8d22769b306f93 208 Pfam PF00881 Nitroreductase family 9 188 1.7E-31 T 23-04-2016 IPR029479 Nitroreductase CFF04554_RS04515 76a5f20534b34ab2088ff12293061e88 147 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 5 136 5.5E-20 T 23-04-2016 IPR009936 Protein of unknown function DUF1468 CFF04554_RS07180 7c6911e9ce51fb71a3cc285eed875282 186 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 30 181 3.0E-69 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 CFF04554_RS07180 7c6911e9ce51fb71a3cc285eed875282 186 PANTHER PTHR30390:SF6 1 182 5.4E-80 T 23-04-2016 CFF04554_RS07180 7c6911e9ce51fb71a3cc285eed875282 186 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 185 37.945 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 CFF04554_RS07180 7c6911e9ce51fb71a3cc285eed875282 186 SUPERFAMILY SSF53697 3 183 1.45E-54 T 23-04-2016 CFF04554_RS07180 7c6911e9ce51fb71a3cc285eed875282 186 PANTHER PTHR30390 1 182 5.4E-80 T 23-04-2016 CFF04554_RS07180 7c6911e9ce51fb71a3cc285eed875282 186 Pfam PF13580 SIS domain 10 142 1.8E-30 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CFF04554_RS07180 7c6911e9ce51fb71a3cc285eed875282 186 Gene3D G3DSA:3.40.50.10490 4 183 5.4E-63 T 23-04-2016 CFF04554_RS05970 1e1b39ddff483f5f803ccec6a13a125d 299 SUPERFAMILY SSF50978 111 297 1.69E-20 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CFF04554_RS05970 1e1b39ddff483f5f803ccec6a13a125d 299 SUPERFAMILY SSF50978 26 61 1.69E-20 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CFF04554_RS05970 1e1b39ddff483f5f803ccec6a13a125d 299 Gene3D G3DSA:2.130.10.10 30 298 3.8E-13 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CFF04554_RS05970 1e1b39ddff483f5f803ccec6a13a125d 299 SMART SM00320 260 297 1.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 CFF04554_RS05970 1e1b39ddff483f5f803ccec6a13a125d 299 SMART SM00320 144 182 25.0 T 23-04-2016 IPR001680 WD40 repeat GO:0005515 CFF04554_RS07740 8610ea28c31f8a1d817c02bfd3f6e61e 270 Pfam PF13103 TonB C terminal 179 260 1.1E-16 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 CFF04554_RS08460 66ebc64b499b57d181593dfa31b5972d 172 Pfam PF03787 RAMP superfamily 14 165 1.4E-7 T 23-04-2016 IPR005537 CRISPR type III-associated RAMP protein CFF04554_RS00110 40f674bfcdef789f9916375c346e616c 53 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 15 47 7.2E-8 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 CFF04554_RS07115 470744dad227ac189047944dc1f39eff 322 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 294 2.6E-69 T 23-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 CFF04554_RS07115 470744dad227ac189047944dc1f39eff 322 PANTHER PTHR30160 2 320 9.4E-29 T 23-04-2016 CFF04554_RS07115 470744dad227ac189047944dc1f39eff 322 Gene3D G3DSA:3.40.50.2000 2 144 5.9E-25 T 23-04-2016 CFF04554_RS07115 470744dad227ac189047944dc1f39eff 322 PANTHER PTHR30160:SF1 2 320 9.4E-29 T 23-04-2016 CFF04554_RS07115 470744dad227ac189047944dc1f39eff 322 SUPERFAMILY SSF53756 2 321 2.93E-55 T 23-04-2016 CFF04554_RS07115 470744dad227ac189047944dc1f39eff 322 Gene3D G3DSA:3.40.50.2000 164 321 1.6E-26 T 23-04-2016 CFF04554_RS07115 470744dad227ac189047944dc1f39eff 322 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 287 4.0E-42 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CFF04554_RS07615 00da0ded7f30ee0e2b8133b33c2a7206 134 SUPERFAMILY SSF53067 2 79 6.47E-9 T 23-04-2016 CFF04554_RS07615 00da0ded7f30ee0e2b8133b33c2a7206 134 Gene3D G3DSA:3.30.420.40 15 79 8.4E-5 T 23-04-2016 CFF04554_RS06875 88c663d7bef796becfc2b4f4811548cd 205 Pfam PF02666 Phosphatidylserine decarboxylase 47 201 4.7E-7 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CFF04554_RS06875 88c663d7bef796becfc2b4f4811548cd 205 PANTHER PTHR35809 19 200 4.2E-13 T 23-04-2016 CFF04554_RS08780 5aff485730775823ad5eeed9b3945a62 336 SUPERFAMILY SSF48452 73 172 6.21E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS08780 5aff485730775823ad5eeed9b3945a62 336 Gene3D G3DSA:1.25.40.10 73 203 1.8E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS08780 5aff485730775823ad5eeed9b3945a62 336 Pfam PF13181 Tetratricopeptide repeat 112 141 0.091 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS08780 5aff485730775823ad5eeed9b3945a62 336 Pfam PF13176 Tetratricopeptide repeat 74 106 6.8E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CFF04554_RS07215 f5277d3238642091a8be43cad9136c24 104 Pfam PF00034 Cytochrome c 19 104 4.7E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07215 f5277d3238642091a8be43cad9136c24 104 SUPERFAMILY SSF46626 8 104 6.07E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS07215 f5277d3238642091a8be43cad9136c24 104 Gene3D G3DSA:1.10.760.10 19 104 7.6E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS02410 22d4efe2096fffefc6a8e44a317da20b 1110 PRINTS PR00313 NodO calcium binding signature 439 447 6.4E-10 T 23-04-2016 CFF04554_RS02410 22d4efe2096fffefc6a8e44a317da20b 1110 PRINTS PR00313 NodO calcium binding signature 980 989 6.4E-10 T 23-04-2016 CFF04554_RS02410 22d4efe2096fffefc6a8e44a317da20b 1110 PRINTS PR00313 NodO calcium binding signature 419 427 6.4E-10 T 23-04-2016 CFF04554_RS02410 22d4efe2096fffefc6a8e44a317da20b 1110 PRINTS PR00313 NodO calcium binding signature 231 242 6.4E-10 T 23-04-2016 CFF04554_RS01970 86ee848ae44719b47c1ae37f615b1749 186 ProDom PD315620 CJ0990C 23 177 6.0E-5 T 23-04-2016 IPR020525 Uncharacterised protein family Cj0990c CFF04554_RS00990 ac93f0d9e2cc244540be7c223b5e707a 238 Pfam PF11741 AMIN domain 153 235 6.9E-14 T 23-04-2016 IPR021731 AMIN domain CFF04554_RS05175 6af842ae496a027a170257baa56d6194 237 Pfam PF02591 C4-type zinc ribbon domain 198 230 3.2E-12 T 23-04-2016 IPR003743 C4-type zinc ribbon domain CFF04554_RS05175 6af842ae496a027a170257baa56d6194 237 PANTHER PTHR39082 1 235 1.9E-26 T 23-04-2016 CFF04554_RS06605 ea3f946f258fb28fa2a28ab90f758dc7 99 Pfam PF13453 Transcription factor zinc-finger 2 43 2.0E-20 T 23-04-2016 IPR027392 Transcription factor zinc-finger CFF04554_RS02005 cf801ca5d0d4d5b746e49325ff06ae69 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 1.5E-41 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CFF04554_RS02005 cf801ca5d0d4d5b746e49325ff06ae69 298 PANTHER PTHR11795 1 290 2.3E-109 T 23-04-2016 CFF04554_RS02005 cf801ca5d0d4d5b746e49325ff06ae69 298 PANTHER PTHR11795:SF371 1 290 2.3E-109 T 23-04-2016 CFF04554_RS04705 1a39d2fb52234e61b79808f951f1f349 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 99 6.1E-16 T 23-04-2016 IPR008407 Branched-chain amino acid transport, AzlD CFF04554_RS04705 1a39d2fb52234e61b79808f951f1f349 103 PIRSF PIRSF003203 1 103 8.8E-24 T 23-04-2016 IPR008407 Branched-chain amino acid transport, AzlD CFF04554_RS08800 edf31cb1e341de0982573365bfb02cc6 232 Pfam PF04402 Protein of unknown function (DUF541) 36 203 1.4E-15 T 23-04-2016 IPR007497 Protein of unknown function DUF541 CFF04554_RS08800 edf31cb1e341de0982573365bfb02cc6 232 PIRSF PIRSF029033 1 232 8.0E-59 T 23-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein CFF04554_RS05505 8efa78fcff0774efab0e2b31a9d3c3e1 116 Pfam PF16083 LydA holin phage, holin superfamily III 18 93 6.0E-12 T 23-04-2016 IPR032126 LydA-like holin CFF04554_RS05765 74da81132acf67874142f199cc02af21 180 Pfam PF12163 DNA replication regulator 1 180 1.5E-75 T 23-04-2016 IPR021011 DNA replication regulator, HobA CFF04554_RS00075 8c3fc58e66e56af2579a87f3b996f2fc 189 SUPERFAMILY SSF53098 3 180 1.82E-47 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS00075 8c3fc58e66e56af2579a87f3b996f2fc 189 PANTHER PTHR10954 4 179 1.4E-42 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 CFF04554_RS00075 8c3fc58e66e56af2579a87f3b996f2fc 189 Gene3D G3DSA:3.30.420.10 4 144 9.7E-32 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CFF04554_RS00075 8c3fc58e66e56af2579a87f3b996f2fc 189 Pfam PF01351 Ribonuclease HII 5 180 1.2E-32 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain CFF04554_RS06065 512f7e7c068d4ed7e2a2316b87e607f8 118 SUPERFAMILY SSF46626 6 115 9.16E-11 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS06065 512f7e7c068d4ed7e2a2316b87e607f8 118 Pfam PF00034 Cytochrome c 28 113 4.9E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS06065 512f7e7c068d4ed7e2a2316b87e607f8 118 Gene3D G3DSA:1.10.760.10 37 117 1.3E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS08600 18eb88f96766e43fc696a04dcf4093b5 91 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 84 2.8E-9 T 23-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CFF04554_RS02690 f9a1d9e2c60fc9da376748c9077f6b28 159 Pfam PF13664 Domain of unknown function (DUF4149) 11 120 7.0E-14 T 23-04-2016 IPR025423 Domain of unknown function DUF4149 CFF04554_RS07050 3c9f7cf6016970c161def7fc6da47a51 758 Pfam PF02516 Oligosaccharyl transferase STT3 subunit 19 530 7.0E-54 T 23-04-2016 IPR003674 Oligosaccharyl transferase, STT3 subunit GO:0004576|GO:0006486|GO:0016020 UniPathway: UPA00378 CFF04554_RS03675 b8edd45dff2f16de31d864b14f82d075 179 Pfam PF04390 Lipopolysaccharide-assembly 8 167 9.3E-10 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CFF04554_RS05885 6449916d53ebff9e43aff4773e351621 255 SUPERFAMILY SSF110997 182 251 1.57E-5 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CFF04554_RS05885 6449916d53ebff9e43aff4773e351621 255 Gene3D G3DSA:3.30.70.1070 180 249 1.4E-4 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CFF04554_RS05885 6449916d53ebff9e43aff4773e351621 255 Pfam PF05036 Sporulation related domain 183 242 1.4E-5 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 CFF04554_RS01185 134d4d1bb9d3e37ed928f146347b9150 375 Gene3D G3DSA:2.40.10.220 247 349 6.8E-4 T 23-04-2016 CFF04554_RS01840 b9af0e62ec00ca5b0a7fe359c981f443 191 PANTHER PTHR34606 36 191 7.4E-14 T 23-04-2016 CFF04554_RS01840 b9af0e62ec00ca5b0a7fe359c981f443 191 SMART SM00749 52 115 0.18 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria CFF04554_RS01840 b9af0e62ec00ca5b0a7fe359c981f443 191 SMART SM00749 128 190 31.0 T 23-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria CFF04554_RS01840 b9af0e62ec00ca5b0a7fe359c981f443 191 Pfam PF04972 BON domain 48 113 4.3E-14 T 23-04-2016 IPR007055 BON domain CFF04554_RS01840 b9af0e62ec00ca5b0a7fe359c981f443 191 Pfam PF04972 BON domain 126 189 4.9E-6 T 23-04-2016 IPR007055 BON domain CFF04554_RS01590 ef3385350bae40a74302e74c5d0f33f6 250 Pfam PF04085 rod shape-determining protein MreC 154 246 1.8E-14 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CFF04554_RS07455 0027ee9de7c9f1a9728b6e3241727156 161 Pfam PF02169 LPP20 lipoprotein 69 148 1.8E-7 T 23-04-2016 IPR024952 Lipoprotein LPP20-like CFF04554_RS07455 0027ee9de7c9f1a9728b6e3241727156 161 PIRSF PIRSF028687 1 161 3.9E-38 T 23-04-2016 IPR007293 Flagellar protein FlgP CFF04554_RS03225 a3b18b884bd04e6e1aae8b07bd54ba69 141 Pfam PF10881 Protein of unknown function (DUF2726) 13 115 1.4E-9 T 23-04-2016 IPR024402 Domain of unknown function DUF2726 CFF04554_RS01495 73e7757e29f81f7614932bcbc5c9b0b6 177 Pfam PF09624 Protein of unknown function (DUF2393) 19 177 6.4E-40 T 23-04-2016 IPR013417 Conserved hypothetical protein CHP02588 CFF04554_RS03275 d4acc2161ff276f45309672b2206c401 223 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 23 151 6.7E-10 T 23-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system CFF04554_RS02095 3878d4d21a76bb127daa103a9abb4d2b 183 SUPERFAMILY SSF89155 2 178 9.94E-10 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone CFF04554_RS02095 3878d4d21a76bb127daa103a9abb4d2b 183 Gene3D G3DSA:1.10.3480.10 85 178 2.1E-5 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone CFF04554_RS06120 dd5ad44e3565c656d5d113f0ef3ed122 155 Pfam PF03968 OstA-like protein 23 132 6.4E-16 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal CFF04554_RS06120 dd5ad44e3565c656d5d113f0ef3ed122 155 Gene3D G3DSA:2.60.450.10 19 149 1.2E-19 T 23-04-2016 CFF04554_RS02490 2fd59cdbfdf5ec396dc780ff8d429463 429 Pfam PF06097 Bacterial protein of unknown function (DUF945) 19 367 2.9E-8 T 23-04-2016 IPR010352 Protein of unknown function DUF945 CFF04554_RS01915 20db0074ba528942e2126438a77e66b6 72 Pfam PF13179 Family of unknown function (DUF4006) 1 63 3.8E-30 T 23-04-2016 IPR025065 Protein of unknown function DUF4006 CFF04554_RS00740 75dc134895ced9dd8a8fa1f779919df5 268 Pfam PF01435 Peptidase family M48 71 255 2.1E-37 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CFF04554_RS00740 75dc134895ced9dd8a8fa1f779919df5 268 PANTHER PTHR22726 6 264 4.4E-63 T 23-04-2016 CFF04554_RS00740 75dc134895ced9dd8a8fa1f779919df5 268 Gene3D G3DSA:3.30.2010.10 67 154 1.5E-16 T 23-04-2016 CFF04554_RS07230 8dcea727d48ff4bbd687e304188c7c95 42 Gene3D G3DSA:1.25.40.10 1 35 8.3E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS07230 8dcea727d48ff4bbd687e304188c7c95 42 SUPERFAMILY SSF81901 1 40 2.49E-5 T 23-04-2016 CFF04554_RS08045 d9f947641fb594f2f0fcbcfb6bb39677 740 SUPERFAMILY SSF53756 285 522 1.44E-10 T 23-04-2016 CFF04554_RS07015 d43ac344383f475cb8a86bcddc3cf29b 203 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 28 130 6.0E-24 T 23-04-2016 IPR007172 Domain of unknown function DUF374 CFF04554_RS07015 d43ac344383f475cb8a86bcddc3cf29b 203 Pfam PF04028 Domain of unknown function (DUF374) 62 129 2.2E-27 T 23-04-2016 IPR007172 Domain of unknown function DUF374 CFF04554_RS02225 e2d6a1c1f2318d48d3308a82f7b452dc 147 SUPERFAMILY SSF46626 76 141 5.24E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS02225 e2d6a1c1f2318d48d3308a82f7b452dc 147 Gene3D G3DSA:1.10.760.10 77 141 2.9E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CFF04554_RS01990 0df32bccb9ca02d01f845644ca5e606e 406 SUPERFAMILY SSF56935 260 406 1.28E-17 T 23-04-2016 CFF04554_RS01990 0df32bccb9ca02d01f845644ca5e606e 406 SUPERFAMILY SSF56935 24 227 1.28E-17 T 23-04-2016 CFF04554_RS01990 0df32bccb9ca02d01f845644ca5e606e 406 Gene3D G3DSA:2.40.160.10 33 141 1.5E-10 T 23-04-2016 IPR023614 Porin domain CFF04554_RS01990 0df32bccb9ca02d01f845644ca5e606e 406 Gene3D G3DSA:2.40.160.10 198 404 1.5E-10 T 23-04-2016 IPR023614 Porin domain CFF04554_RS01990 0df32bccb9ca02d01f845644ca5e606e 406 Pfam PF05538 Campylobacter major outer membrane protein 1 406 1.6E-104 T 23-04-2016 IPR008439 Campylobacter major outer membrane CFF04554_RS05520 b105c2ef084d9c60bdbbc40cd60a915b 117 Pfam PF07087 Protein of unknown function (DUF1353) 21 107 6.1E-19 T 23-04-2016 IPR010767 Campylobacter phage CGC-2007, Cje0229 CFF04554_RS08760 defe9d73c1d8eec97369609c582f745c 407 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 128 385 2.9E-6 T 23-04-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 CFF04554_RS08760 defe9d73c1d8eec97369609c582f745c 407 SUPERFAMILY SSF53756 111 401 9.84E-6 T 23-04-2016 CFF04554_RS02485 c8c45758a0b90cfe9862622ed0ed31a5 189 Pfam PF09335 SNARE associated Golgi protein 25 142 4.9E-15 T 23-04-2016 IPR032816 SNARE associated Golgi protein CFF04554_RS02485 c8c45758a0b90cfe9862622ed0ed31a5 189 PANTHER PTHR30353 1 189 1.2E-25 T 23-04-2016 IPR032818 DedA family CFF04554_RS07785 84f4d09e57f2dadf4d24c8b1f7c75322 140 Pfam PF00430 ATP synthase B/B' CF(0) 10 122 9.2E-13 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CFF04554_RS04000 0333551a90d47b2fc02c4ec474190b1e 326 SUPERFAMILY SSF63418 22 91 7.98E-5 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CFF04554_RS08455 d7e272387d939818efdc4d48b0e7d92a 454 Gene3D G3DSA:1.25.40.180 350 412 5.7E-4 T 23-04-2016 IPR016021 MIF4G-like domain CFF04554_RS06535 5093b27fa3c183610ba86709de198227 136 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 1 90 1.5E-4 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CFF04554_RS06535 5093b27fa3c183610ba86709de198227 136 Gene3D G3DSA:2.30.110.10 3 94 8.9E-10 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CFF04554_RS06535 5093b27fa3c183610ba86709de198227 136 SUPERFAMILY SSF50475 2 135 1.43E-16 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CFF04554_RS07725 a02811a9d74d7eaa4dfc408cde24437e 293 Gene3D G3DSA:1.25.40.10 186 284 9.2E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS07725 a02811a9d74d7eaa4dfc408cde24437e 293 SUPERFAMILY SSF48452 182 287 3.84E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CFF04554_RS03705 30a6f012eebe1bf75cea1f86b53130bb 201 Pfam PF12118 SprA-related family 29 190 8.5E-32 T 23-04-2016 IPR021973 SprA-related family CFF04554_RS05630 e18e6cc282dcd828d3de2c4005b7f9ef 353 Pfam PF04860 Phage portal protein 75 348 4.0E-27 T 23-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein CFF04554_RS02480 0dfcedd285ddb0a010d75edbd47b3997 194 Pfam PF04366 Las17-binding protein actin regulator 89 174 1.9E-11 T 23-04-2016 IPR007461 Ysc84 actin-binding domain CFF04554_RS03370 8d3c17ac32e7af60127096b1420711f8 99 Pfam PF01548 Transposase 3 98 4.8E-14 T 23-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CFF04554_RS01225 45311d1892d89e261751cdabc0a8a02b 204 Pfam PF13114 RecO N terminal 1 70 3.1E-33 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal CFF04554_RS04910 9688a385dd6cf6e9f91aa73623f66bf7 305 Pfam PF11867 Domain of unknown function (DUF3387) 23 275 3.8E-9 T 23-04-2016 IPR021810 Protein of unknown function DUF3387 CFF04554_RS03470 90dc6645719c9566e6ca35e2f7b80f1d 130 Pfam PF04186 FxsA cytoplasmic membrane protein 6 93 3.2E-7 T 23-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CFF04554_RS09355 dace10f3517f39e49f4e8871d53f8483 62 Pfam PF13449 Esterase-like activity of phytase 3 43 8.7E-7 T 23-04-2016 IPR027372 Phytase-like domain CFF04554_RS03490 b5fffa225f45a8e9d9493c1579b67111 238 Pfam PF15436 Plasminogen-binding protein pgbA N-terminal 29 236 3.3E-80 T 23-04-2016 IPR029276 Plasminogen-binding protein PgbA, N-terminal CFF04554_RS02875 5d37069f2fabb03d17c4f597fe0c3bc6 390 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 40 174 8.3E-6 T 23-04-2016 CFF04554_RS02315 b6d28a98a646cc6f021b892b16e4a011 937 PRINTS PR00313 NodO calcium binding signature 795 804 2.0E-6 T 23-04-2016 CFF04554_RS02315 b6d28a98a646cc6f021b892b16e4a011 937 PRINTS PR00313 NodO calcium binding signature 588 596 2.0E-6 T 23-04-2016 CFF04554_RS02315 b6d28a98a646cc6f021b892b16e4a011 937 PRINTS PR00313 NodO calcium binding signature 233 244 2.0E-6 T 23-04-2016 CFF04554_RS02315 b6d28a98a646cc6f021b892b16e4a011 937 PRINTS PR00313 NodO calcium binding signature 566 574 2.0E-6 T 23-04-2016