CFTSP3_RS00005	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CFTSP3_RS00010	SM00480	DNA polymerase III beta subunit
CFTSP3_RS00015	SM00387	Histidine kinase-like ATPases
CFTSP3_RS00015	SM00433	TopoisomeraseII
CFTSP3_RS00020	SM00052	Putative diguanylate phosphodiesterase
CFTSP3_RS00085	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS00090	SM00671	Sel1-like repeats.
CFTSP3_RS00150	SM01403	CFTSP3_RS00150
CFTSP3_RS00170	SM01382	CFTSP3_RS00170
CFTSP3_RS00170	SM01383	CFTSP3_RS00170
CFTSP3_RS00185	SM00322	K homology RNA-binding domain
CFTSP3_RS00205	SM01374	CFTSP3_RS00205
CFTSP3_RS00210	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CFTSP3_RS00290	SM00363	S4 RNA-binding domain
CFTSP3_RS00290	SM01390	CFTSP3_RS00290
CFTSP3_RS00295	SM00662	RNA polymerases D
CFTSP3_RS00325	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS00335	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFTSP3_RS00345	SM00861	Transketolase, pyrimidine binding domain
CFTSP3_RS00370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CFTSP3_RS00370	SM00895	CFTSP3_RS00370
CFTSP3_RS00400	SM00876	Biotin and Thiamin Synthesis associated domain
CFTSP3_RS00425	SM00867	YceI-like domain 
CFTSP3_RS00585	SM00986	Uracil DNA glycosylase superfamily
CFTSP3_RS00585	SM00987	UreE urease accessory protein, C-terminal domain 
CFTSP3_RS00720	SM00448	cheY-homologous receiver domain
CFTSP3_RS00720	SM00862	Transcriptional regulatory protein, C terminal
CFTSP3_RS00770	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFTSP3_RS00770	SM01091	Transporter associated domain
CFTSP3_RS00805	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS00845	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CFTSP3_RS00850	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CFTSP3_RS00850	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CFTSP3_RS00910	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS00915	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CFTSP3_RS00915	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CFTSP3_RS00915	SM00493	CFTSP3_RS00915
CFTSP3_RS00920	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS00920	SM00876	Biotin and Thiamin Synthesis associated domain
CFTSP3_RS00955	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS00965	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS00985	SM00852	Probable molybdopterin binding domain
CFTSP3_RS00990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS01040	SM01192	CFTSP3_RS01040
CFTSP3_RS01040	SM01193	CFTSP3_RS01040
CFTSP3_RS01045	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS01105	SM00028	Tetratricopeptide repeats
CFTSP3_RS01130	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS01170	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CFTSP3_RS01170	SM00474	3'-5' exonuclease
CFTSP3_RS01170	SM00475	5'-3' exonuclease
CFTSP3_RS01170	SM00479	CFTSP3_RS01170
CFTSP3_RS01170	SM00482	DNA polymerase A domain
CFTSP3_RS01190	SM00562	CFTSP3_RS01190
CFTSP3_RS01225	SM01207	CFTSP3_RS01225
CFTSP3_RS01230	SM00905	Dihydroneopterin aldolase
CFTSP3_RS01235	SM00448	cheY-homologous receiver domain
CFTSP3_RS01235	SM00862	Transcriptional regulatory protein, C terminal
CFTSP3_RS01240	SM00387	Histidine kinase-like ATPases
CFTSP3_RS01240	SM00388	His Kinase A (phosphoacceptor) domain
CFTSP3_RS01310	SM01118	CFTSP3_RS01310
CFTSP3_RS01325	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS01345	SM00861	Transketolase, pyrimidine binding domain
CFTSP3_RS01370	SM00830	Chorismate mutase type II
CFTSP3_RS01420	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS01465	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CFTSP3_RS01535	SM00244	prohibitin homologues
CFTSP3_RS01545	SM00530	Helix-turn-helix XRE-family like proteins 
CFTSP3_RS01600	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS01600	SM00994	ClpX C4-type zinc finger
CFTSP3_RS01600	SM01086	C-terminal, D2-small domain, of ClpB protein
CFTSP3_RS01605	SM00268	Actin
CFTSP3_RS01615	SM00851	MGS-like domain
CFTSP3_RS01615	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CFTSP3_RS01630	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFTSP3_RS01630	SM00091	PAS domain
CFTSP3_RS01630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS01665	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CFTSP3_RS01675	SM00260	Two component signalling adaptor domain
CFTSP3_RS01675	SM00448	cheY-homologous receiver domain
CFTSP3_RS01680	SM00073	Histidine Phosphotransfer domain
CFTSP3_RS01680	SM00260	Two component signalling adaptor domain
CFTSP3_RS01680	SM00387	Histidine kinase-like ATPases
CFTSP3_RS01680	SM00448	cheY-homologous receiver domain
CFTSP3_RS01680	SM01231	CFTSP3_RS01680
CFTSP3_RS01685	SM00260	Two component signalling adaptor domain
CFTSP3_RS01700	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS01770	SM00487	DEAD-like helicases superfamily
CFTSP3_RS01770	SM00490	helicase superfamily c-terminal domain
CFTSP3_RS01845	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS01880	SM00749	bacterial OsmY and nodulation domain
CFTSP3_RS01885	SM00052	Putative diguanylate phosphodiesterase
CFTSP3_RS01885	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFTSP3_RS01885	SM00091	PAS domain
CFTSP3_RS01885	SM00267	diguanylate cyclase
CFTSP3_RS01895	SM00788	Adenylosuccinate synthetase
CFTSP3_RS01915	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CFTSP3_RS01925	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CFTSP3_RS01925	SM00091	PAS domain
CFTSP3_RS01925	SM00387	Histidine kinase-like ATPases
CFTSP3_RS01930	SM00448	cheY-homologous receiver domain
CFTSP3_RS01930	SM00862	Transcriptional regulatory protein, C terminal
CFTSP3_RS02005	SM00890	Domain of unknown function
CFTSP3_RS02055	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02060	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02085	SM00448	cheY-homologous receiver domain
CFTSP3_RS02110	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02185	SM00100	Cyclic nucleotide-monophosphate binding domain
CFTSP3_RS02185	SM00419	helix_turn_helix, cAMP Regulatory protein
CFTSP3_RS02200	SM00388	His Kinase A (phosphoacceptor) domain
CFTSP3_RS02205	SM00448	cheY-homologous receiver domain
CFTSP3_RS02205	SM00862	Transcriptional regulatory protein, C terminal
CFTSP3_RS02255	SM00710	Parallel beta-helix repeats
CFTSP3_RS02280	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFTSP3_RS02300	SM00388	His Kinase A (phosphoacceptor) domain
CFTSP3_RS02305	SM00448	cheY-homologous receiver domain
CFTSP3_RS02305	SM00862	Transcriptional regulatory protein, C terminal
CFTSP3_RS02340	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02360	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02385	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02400	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02495	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02515	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02520	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02520	SM00962	SRP54-type protein, GTPase domain
CFTSP3_RS02535	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFTSP3_RS02575	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFTSP3_RS02580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS02590	SM00478	endonuclease III
CFTSP3_RS02590	SM00525	CFTSP3_RS02590
CFTSP3_RS02670	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02710	SM00387	Histidine kinase-like ATPases
CFTSP3_RS02710	SM00388	His Kinase A (phosphoacceptor) domain
CFTSP3_RS02715	SM00448	cheY-homologous receiver domain
CFTSP3_RS02715	SM00862	Transcriptional regulatory protein, C terminal
CFTSP3_RS02725	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS02780	SM00938	Nitrogen regulatory protein P-II
CFTSP3_RS02795	SM01234	CFTSP3_RS02795
CFTSP3_RS02805	SM01245	CFTSP3_RS02805
CFTSP3_RS02820	SM00271	DnaJ molecular chaperone homology domain
CFTSP3_RS02825	SM00798	AICARFT/IMPCHase bienzyme
CFTSP3_RS02825	SM00851	MGS-like domain
CFTSP3_RS02845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS02845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CFTSP3_RS02875	SM01007	Class II Aldolase and Adducin N-terminal domain
CFTSP3_RS02885	SM00842	Cell division protein FtsA
CFTSP3_RS02890	SM00864	Tubulin/FtsZ family, GTPase domain
CFTSP3_RS02890	SM00865	Tubulin/FtsZ family, C-terminal domain
CFTSP3_RS02915	SM00957	SecA DEAD-like domain
CFTSP3_RS02915	SM00958	SecA preprotein cross-linking domain
CFTSP3_RS03005	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFTSP3_RS03035	SM00267	diguanylate cyclase
CFTSP3_RS03065	SM00116	Domain in cystathionine beta-synthase and other proteins.
CFTSP3_RS03065	SM01240	CFTSP3_RS03065
CFTSP3_RS03100	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS03110	SM00062	Bacterial periplasmic substrate-binding proteins
CFTSP3_RS03125	SM00463	Small MutS-related domain
CFTSP3_RS03125	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CFTSP3_RS03125	SM00534	ATPase domain of DNA mismatch repair MUTS family
CFTSP3_RS03130	SM00052	Putative diguanylate phosphodiesterase
CFTSP3_RS03130	SM00267	diguanylate cyclase
CFTSP3_RS03165	SM00487	DEAD-like helicases superfamily
CFTSP3_RS03165	SM00490	helicase superfamily c-terminal domain
CFTSP3_RS03275	SM00487	DEAD-like helicases superfamily
CFTSP3_RS03320	SM00894	Excalibur calcium-binding domain
CFTSP3_RS03560	SM00487	DEAD-like helicases superfamily
CFTSP3_RS03560	SM00490	helicase superfamily c-terminal domain
CFTSP3_RS03595	SM00878	Biotin carboxylase C-terminal domain
CFTSP3_RS03610	SM00271	DnaJ molecular chaperone homology domain
CFTSP3_RS03635	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS03635	SM00843	CFTSP3_RS03635
CFTSP3_RS03695	SM00924	MgtE intracellular N domain
CFTSP3_RS03710	SM00883	Chaperonin 10 Kd subunit
CFTSP3_RS03755	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS03755	SM01086	C-terminal, D2-small domain, of ClpB protein
CFTSP3_RS03825	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS03845	SM01323	CFTSP3_RS03845
CFTSP3_RS03875	SM00267	diguanylate cyclase
CFTSP3_RS03895	SM00487	DEAD-like helicases superfamily
CFTSP3_RS03895	SM00490	helicase superfamily c-terminal domain
CFTSP3_RS03895	SM00982	CFTSP3_RS03895
CFTSP3_RS03895	SM01058	CarD-like/TRCF domain
CFTSP3_RS03910	SM00478	endonuclease III
CFTSP3_RS03920	SM00881	CoA binding domain
CFTSP3_RS03930	SM00912	haemagglutination activity domain
CFTSP3_RS04005	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS04020	SM00388	His Kinase A (phosphoacceptor) domain
CFTSP3_RS04025	SM00448	cheY-homologous receiver domain
CFTSP3_RS04025	SM00862	Transcriptional regulatory protein, C terminal
CFTSP3_RS04030	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFTSP3_RS04035	SM00271	DnaJ molecular chaperone homology domain
CFTSP3_RS04040	SM00422	helix_turn_helix, mercury resistance
CFTSP3_RS04080	SM00845	GatB domain
CFTSP3_RS04105	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS04115	SM00062	Bacterial periplasmic substrate-binding proteins
CFTSP3_RS04130	SM01130	CFTSP3_RS04130
CFTSP3_RS04145	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS04160	SM00487	DEAD-like helicases superfamily
CFTSP3_RS04160	SM00490	helicase superfamily c-terminal domain
CFTSP3_RS04195	SM00100	Cyclic nucleotide-monophosphate binding domain
CFTSP3_RS04195	SM00419	helix_turn_helix, cAMP Regulatory protein
CFTSP3_RS04220	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS04235	SM00138	Methyltransferase, chemotaxis proteins 
CFTSP3_RS04250	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CFTSP3_RS04350	SM00998	Adenylosuccinate lyase C-terminus
CFTSP3_RS04425	SM00448	cheY-homologous receiver domain
CFTSP3_RS04425	SM00862	Transcriptional regulatory protein, C terminal
CFTSP3_RS04430	SM00387	Histidine kinase-like ATPases
CFTSP3_RS04430	SM00388	His Kinase A (phosphoacceptor) domain
CFTSP3_RS04455	SM00411	bacterial (prokaryotic) histone like domain
CFTSP3_RS04475	SM00363	S4 RNA-binding domain
CFTSP3_RS04485	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS04505	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS04510	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS04515	SM00852	Probable molybdopterin binding domain
CFTSP3_RS04535	SM00342	helix_turn_helix, arabinose operon control protein
CFTSP3_RS04545	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFTSP3_RS04555	SM00479	CFTSP3_RS04555
CFTSP3_RS04560	SM00487	DEAD-like helicases superfamily
CFTSP3_RS04560	SM00490	helicase superfamily c-terminal domain
CFTSP3_RS04595	SM00487	DEAD-like helicases superfamily
CFTSP3_RS04595	SM00490	helicase superfamily c-terminal domain
CFTSP3_RS04625	SM00855	Phosphoglycerate mutase family
CFTSP3_RS04665	SM00852	Probable molybdopterin binding domain
CFTSP3_RS04750	SM00881	CoA binding domain
CFTSP3_RS04915	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS04915	SM01086	C-terminal, D2-small domain, of ClpB protein
CFTSP3_RS04920	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CFTSP3_RS04920	SM00245	tail specific protease
CFTSP3_RS04935	SM01211	CFTSP3_RS04935
CFTSP3_RS04945	SM00563	Phosphate acyltransferases
CFTSP3_RS04970	SM00387	Histidine kinase-like ATPases
CFTSP3_RS04975	SM00450	Rhodanese Homology Domain
CFTSP3_RS05015	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS05015	SM00930	CFTSP3_RS05015
CFTSP3_RS05055	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS05070	SM00248	ankyrin repeats
CFTSP3_RS05090	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS05110	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS05140	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS05140	SM01086	C-terminal, D2-small domain, of ClpB protein
CFTSP3_RS05170	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS05180	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS05195	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS05225	SM01329	CFTSP3_RS05225
CFTSP3_RS05295	SM00870	CFTSP3_RS05295
CFTSP3_RS05315	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CFTSP3_RS05365	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS05365	SM00962	SRP54-type protein, GTPase domain
CFTSP3_RS05365	SM00963	SRP54-type protein, helical bundle domain
CFTSP3_RS05370	SM00419	helix_turn_helix, cAMP Regulatory protein
CFTSP3_RS05380	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS05415	SM01001	AIR carboxylase
CFTSP3_RS05440	SM01230	CFTSP3_RS05440
CFTSP3_RS05460	SM00248	ankyrin repeats
CFTSP3_RS05465	SM01060	CFTSP3_RS05465
CFTSP3_RS05475	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS05475	SM00464	Found in ATP-dependent protease La (LON)
CFTSP3_RS05485	SM00346	helix_turn_helix isocitrate lyase regulation
CFTSP3_RS05490	SM01130	CFTSP3_RS05490
CFTSP3_RS05560	SM00849	Metallo-beta-lactamase superfamily
CFTSP3_RS05600	SM00267	diguanylate cyclase
CFTSP3_RS05605	SM00267	diguanylate cyclase
CFTSP3_RS05665	SM01387	CFTSP3_RS05665
CFTSP3_RS05685	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS05715	SM00904	Riboflavin kinase
CFTSP3_RS05720	SM00363	S4 RNA-binding domain
CFTSP3_RS05725	SM00292	breast cancer carboxy-terminal domain
CFTSP3_RS05725	SM00532	Ligase N family
CFTSP3_RS05755	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS05785	SM00732	Likely ribonuclease with RNase H fold.
CFTSP3_RS05810	SM00955	CFTSP3_RS05810
CFTSP3_RS05835	SM00271	DnaJ molecular chaperone homology domain
CFTSP3_RS05840	SM00448	cheY-homologous receiver domain
CFTSP3_RS05840	SM00862	Transcriptional regulatory protein, C terminal
CFTSP3_RS05845	SM00387	Histidine kinase-like ATPases
CFTSP3_RS05855	SM00869	Autotransporter beta-domain
CFTSP3_RS05955	SM00320	WD40 repeats
CFTSP3_RS05980	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CFTSP3_RS05995	SM00062	Bacterial periplasmic substrate-binding proteins
CFTSP3_RS06000	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS06130	SM00257	Lysin motif
CFTSP3_RS06140	SM00267	diguanylate cyclase
CFTSP3_RS06140	SM00448	cheY-homologous receiver domain
CFTSP3_RS06145	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS06185	SM00646	CFTSP3_RS06185
CFTSP3_RS06200	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CFTSP3_RS06200	SM00954	Region found in RelA / SpoT proteins
CFTSP3_RS06205	SM01409	CFTSP3_RS06205
CFTSP3_RS06225	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS06235	SM00060	Fibronectin type 3 domain
CFTSP3_RS06240	SM00363	S4 RNA-binding domain
CFTSP3_RS06255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS06265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS06330	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS06335	SM00062	Bacterial periplasmic substrate-binding proteins
CFTSP3_RS06360	SM00387	Histidine kinase-like ATPases
CFTSP3_RS06360	SM00388	His Kinase A (phosphoacceptor) domain
CFTSP3_RS06365	SM00481	DNA polymerase alpha chain like domain
CFTSP3_RS06370	SM00360	RNA recognition motif
CFTSP3_RS06405	SM00841	Elongation factor P, C-terminal
CFTSP3_RS06405	SM01185	CFTSP3_RS06405
CFTSP3_RS06420	SM00316	Ribosomal protein S1-like RNA-binding domain
CFTSP3_RS06435	SM00873	B3/4 domain
CFTSP3_RS06435	SM00874	tRNA synthetase B5 domain
CFTSP3_RS06435	SM00896	Ferredoxin-fold anticodon binding domain
CFTSP3_RS06455	SM00316	Ribosomal protein S1-like RNA-binding domain
CFTSP3_RS06455	SM00322	K homology RNA-binding domain
CFTSP3_RS06475	SM01209	CFTSP3_RS06475
CFTSP3_RS06475	SM01210	CFTSP3_RS06475
CFTSP3_RS06485	SM00986	Uracil DNA glycosylase superfamily
CFTSP3_RS06485	SM00987	UreE urease accessory protein, C-terminal domain 
CFTSP3_RS06500	SM00465	GIY-YIG type nucleases (URI domain)
CFTSP3_RS06510	SM00387	Histidine kinase-like ATPases
CFTSP3_RS06510	SM00388	His Kinase A (phosphoacceptor) domain
CFTSP3_RS06515	SM00448	cheY-homologous receiver domain
CFTSP3_RS06595	SM00342	helix_turn_helix, arabinose operon control protein
CFTSP3_RS06605	SM00342	helix_turn_helix, arabinose operon control protein
CFTSP3_RS06640	SM00899	CFTSP3_RS06640
CFTSP3_RS06660	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS06665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS06675	SM00838	Elongation factor G C-terminus
CFTSP3_RS06675	SM00889	Elongation factor G, domain IV
CFTSP3_RS06690	SM00663	RNA polymerase I subunit A N-terminus
CFTSP3_RS06715	SM00649	Ribosomal protein L11/L12
CFTSP3_RS06720	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CFTSP3_RS06720	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CFTSP3_RS06775	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CFTSP3_RS06830	SM00028	Tetratricopeptide repeats
CFTSP3_RS06835	SM00917	LeuA allosteric (dimerisation) domain
CFTSP3_RS06850	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS06860	SM00448	cheY-homologous receiver domain
CFTSP3_RS06870	SM01211	CFTSP3_RS06870
CFTSP3_RS06915	SM00822	CFTSP3_RS06915
CFTSP3_RS06925	SM00825	Beta-ketoacyl synthase
CFTSP3_RS06935	SM00671	Sel1-like repeats.
CFTSP3_RS06950	SM00937	CFTSP3_RS06950
CFTSP3_RS06960	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS06990	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS07000	SM00316	Ribosomal protein S1-like RNA-binding domain
CFTSP3_RS07045	SM00984	UDP binding domain
CFTSP3_RS07095	SM00984	UDP binding domain
CFTSP3_RS07195	SM00869	Autotransporter beta-domain
CFTSP3_RS07215	SM00671	Sel1-like repeats.
CFTSP3_RS07220	SM00357	Cold shock protein domain
CFTSP3_RS07220	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS07220	SM00959	Rho termination factor, N-terminal domain
CFTSP3_RS07225	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS07230	SM00671	Sel1-like repeats.
CFTSP3_RS07240	SM00530	Helix-turn-helix XRE-family like proteins 
CFTSP3_RS07260	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CFTSP3_RS07285	SM00836	DALR anticodon binding domain
CFTSP3_RS07285	SM01016	Arginyl tRNA synthetase N terminal dom
CFTSP3_RS07295	SM00072	Guanylate kinase homologues.
CFTSP3_RS07315	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS07345	SM01228	CFTSP3_RS07345
CFTSP3_RS07405	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CFTSP3_RS07410	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS07410	SM00448	cheY-homologous receiver domain
CFTSP3_RS07425	SM00434	DNA Topoisomerase IV
CFTSP3_RS07475	SM00838	Elongation factor G C-terminus
CFTSP3_RS07480	SM01400	CFTSP3_RS07480
CFTSP3_RS07635	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS07635	SM00962	SRP54-type protein, GTPase domain
CFTSP3_RS07675	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CFTSP3_RS07720	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS07750	SM00470	ParB-like nuclease domain
CFTSP3_RS07805	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CFTSP3_RS07870	SM00858	CFTSP3_RS07870
CFTSP3_RS07875	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CFTSP3_RS07890	SM00919	Malic enzyme, NAD binding domain
CFTSP3_RS07890	SM01274	CFTSP3_RS07890
CFTSP3_RS07895	SM00347	helix_turn_helix multiple antibiotic resistance protein
CFTSP3_RS07910	SM00878	Biotin carboxylase C-terminal domain
CFTSP3_RS07955	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS07970	SM01004	Delta-aminolevulinic acid dehydratase
CFTSP3_RS08000	SM01005	Alanine racemase, C-terminal domain
CFTSP3_RS08045	SM00861	Transketolase, pyrimidine binding domain
CFTSP3_RS08055	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS08340	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS08345	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS08395	SM00729	Elongator protein 3, MiaB family, Radical SAM
CFTSP3_RS08400	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS08415	SM00518	AP endonuclease family 2
CFTSP3_RS08430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS08510	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS08520	SM00267	diguanylate cyclase
CFTSP3_RS08540	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS08555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CFTSP3_RS08570	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CFTSP3_RS08625	SM00937	CFTSP3_RS08625
CFTSP3_RS08675	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS08700	SM00052	Putative diguanylate phosphodiesterase
CFTSP3_RS08700	SM00267	diguanylate cyclase
CFTSP3_RS08705	SM00947	Carbonic anhydrase
CFTSP3_RS08730	SM00358	Double-stranded RNA binding motif
CFTSP3_RS08730	SM00535	Ribonuclease III family
CFTSP3_RS08740	SM00028	Tetratricopeptide repeats
CFTSP3_RS08745	SM00400	zinc finger
CFTSP3_RS08745	SM00493	CFTSP3_RS08745
CFTSP3_RS08805	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS08825	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS08840	SM01060	CFTSP3_RS08840
CFTSP3_RS08860	SM00047	Lysozyme subfamily 2
CFTSP3_RS08890	SM00382	ATPases associated with a variety of cellular activities
CFTSP3_RS08960	SM00869	Autotransporter beta-domain
CFTSP3_RS08990	SM00422	helix_turn_helix, mercury resistance
CFTSP3_RS09030	SM00363	S4 RNA-binding domain
CFTSP3_RS09040	SM00849	Metallo-beta-lactamase superfamily
CFTSP3_RS09045	SM00650	Ribosomal RNA adenine dimethylases
CFTSP3_RS09080	SM00998	Adenylosuccinate lyase C-terminus
