locus-tag class description CR44_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CR44_RS00005 PF00308 Bacterial dnaA protein CR44_RS00005 PF11638 DnaA N-terminal domain CR44_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CR44_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CR44_RS00010 PF02767 DNA polymerase III beta subunit, central domain CR44_RS00015 PF00204 DNA gyrase B CR44_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CR44_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS00015 PF01751 Toprim domain CR44_RS00025 PF14489 QueF-like protein CR44_RS00040 PF00460 Flagella basal body rod protein CR44_RS00040 PF07559 Flagellar basal body protein FlaE CR44_RS00040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CR44_RS00045 PF03963 Flagellar hook capping protein - N-terminal region CR44_RS00055 PF07690 Major Facilitator Superfamily CR44_RS00060 PF00009 Elongation factor Tu GTP binding domain CR44_RS00060 PF03144 Elongation factor Tu domain 2 CR44_RS00060 PF00679 Elongation factor G C-terminus CR44_RS00075 PF01351 Ribonuclease HII CR44_RS00085 PF12857 TOBE-like domain CR44_RS00085 PF00005 ABC transporter CR44_RS00095 PF01545 Cation efflux family CR44_RS00115 PF04055 Radical SAM superfamily CR44_RS00125 PF03372 Endonuclease/Exonuclease/phosphatase family CR44_RS00135 PF00268 Ribonucleotide reductase, small chain CR44_RS00140 PF00795 Carbon-nitrogen hydrolase CR44_RS00150 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CR44_RS00150 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CR44_RS00155 PF00338 Ribosomal protein S10p/S20e CR44_RS00160 PF00297 Ribosomal protein L3 CR44_RS00165 PF00573 Ribosomal protein L4/L1 family CR44_RS00170 PF00276 Ribosomal protein L23 CR44_RS00175 PF00181 Ribosomal Proteins L2, RNA binding domain CR44_RS00175 PF03947 Ribosomal Proteins L2, C-terminal domain CR44_RS00180 PF00203 Ribosomal protein S19 CR44_RS00185 PF00237 Ribosomal protein L22p/L17e CR44_RS00190 PF07650 KH domain CR44_RS00190 PF00189 Ribosomal protein S3, C-terminal domain CR44_RS00195 PF00252 Ribosomal protein L16p/L10e CR44_RS00200 PF00831 Ribosomal L29 protein CR44_RS00205 PF00366 Ribosomal protein S17 CR44_RS00210 PF00238 Ribosomal protein L14p/L23e CR44_RS00215 PF00467 KOW motif CR44_RS00215 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CR44_RS00220 PF00673 ribosomal L5P family C-terminus CR44_RS00220 PF00281 Ribosomal protein L5 CR44_RS00225 PF00253 Ribosomal protein S14p/S29e CR44_RS00230 PF00410 Ribosomal protein S8 CR44_RS00235 PF00347 Ribosomal protein L6 CR44_RS00240 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CR44_RS00245 PF00333 Ribosomal protein S5, N-terminal domain CR44_RS00245 PF03719 Ribosomal protein S5, C-terminal domain CR44_RS00250 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CR44_RS00255 PF00344 SecY translocase CR44_RS00260 PF00557 Metallopeptidase family M24 CR44_RS00265 PF01176 Translation initiation factor 1A / IF-1 CR44_RS00285 PF00444 Ribosomal protein L36 CR44_RS00290 PF00416 Ribosomal protein S13/S18 CR44_RS00295 PF00411 Ribosomal protein S11 CR44_RS00300 PF00163 Ribosomal protein S4/S9 N-terminal domain CR44_RS00300 PF01479 S4 domain CR44_RS00305 PF01000 RNA polymerase Rpb3/RpoA insert domain CR44_RS00305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CR44_RS00305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CR44_RS00310 PF01196 Ribosomal protein L17 CR44_RS00325 PF02875 Mur ligase family, glutamate ligase domain CR44_RS00325 PF08245 Mur ligase middle domain CR44_RS00330 PF02261 Aspartate decarboxylase CR44_RS00335 PF12729 Four helix bundle sensory module for signal transduction CR44_RS00335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS00335 PF00672 HAMP domain CR44_RS00340 PF02575 YbaB/EbfC DNA-binding family CR44_RS00350 PF00348 Polyprenyl synthetase CR44_RS00355 PF02779 Transketolase, pyrimidine binding domain CR44_RS00355 PF02780 Transketolase, C-terminal domain CR44_RS00355 PF00456 Transketolase, thiamine diphosphate binding domain CR44_RS00360 PF00171 Aldehyde dehydrogenase family CR44_RS00370 PF13722 5TM C-terminal transporter carbon starvation CstA CR44_RS00370 PF02554 Carbon starvation protein CstA CR44_RS00380 PF07729 FCD domain CR44_RS00380 PF00392 Bacterial regulatory proteins, gntR family CR44_RS00385 PF07690 Major Facilitator Superfamily CR44_RS00390 PF00890 FAD binding domain CR44_RS00390 PF04205 FMN-binding domain CR44_RS00405 PF05690 Thiazole biosynthesis protein ThiG CR44_RS00410 PF18693 TRAM domain CR44_RS00410 PF04055 Radical SAM superfamily CR44_RS00410 PF00919 Uncharacterized protein family UPF0004 CR44_RS00415 PF09186 Domain of unknown function (DUF1949) CR44_RS00415 PF01205 Uncharacterized protein family UPF0029 CR44_RS00420 PF00483 Nucleotidyl transferase CR44_RS00425 PF00342 Phosphoglucose isomerase CR44_RS00430 PF00210 Ferritin-like domain CR44_RS00435 PF04264 YceI-like domain CR44_RS00450 PF13649 Methyltransferase domain CR44_RS00455 PF08241 Methyltransferase domain CR44_RS00455 PF04301 Protein of unknown function (DUF452) CR44_RS00460 PF00155 Aminotransferase class I and II CR44_RS00470 PF02769 AIR synthase related protein, C-terminal domain CR44_RS00470 PF00586 AIR synthase related protein, N-terminal domain CR44_RS00475 PF01142 tRNA pseudouridine synthase D (TruD) CR44_RS00485 PF02561 Flagellar protein FliS CR44_RS00490 PF07195 Flagellar hook-associated protein 2 C-terminus CR44_RS00490 PF02465 Flagellar hook-associated protein 2 N-terminus CR44_RS00510 PF02119 Flagellar P-ring protein CR44_RS00530 PF00460 Flagella basal body rod protein CR44_RS00530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CR44_RS00540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CR44_RS00540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CR44_RS00540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CR44_RS00540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CR44_RS00545 PF00483 Nucleotidyl transferase CR44_RS00545 PF01050 Mannose-6-phosphate isomerase CR44_RS00550 PF06508 Queuosine biosynthesis protein QueC CR44_RS00555 PF00749 tRNA synthetases class I (E and Q), catalytic domain CR44_RS00560 PF02325 YGGT family CR44_RS00585 PF00258 Flavodoxin CR44_RS00590 PF02664 S-Ribosylhomocysteinase (LuxS) CR44_RS00595 PF03167 Uracil DNA glycosylase superfamily CR44_RS00600 PF00453 Ribosomal protein L20 CR44_RS00605 PF01632 Ribosomal protein L35 CR44_RS00625 PF00873 AcrB/AcrD/AcrF family CR44_RS00640 PF12801 4Fe-4S binding domain CR44_RS00640 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CR44_RS00640 PF13746 4Fe-4S dicluster domain CR44_RS00645 PF01165 Ribosomal protein S21 CR44_RS00660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CR44_RS00665 PF12838 4Fe-4S dicluster domain CR44_RS00670 PF00374 Nickel-dependent hydrogenase CR44_RS00670 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CR44_RS00670 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CR44_RS00675 PF00361 Proton-conducting membrane transporter CR44_RS00675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CR44_RS00680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CR44_RS00685 PF00146 NADH dehydrogenase CR44_RS00690 PF00361 Proton-conducting membrane transporter CR44_RS00695 PF12800 4Fe-4S binding domain CR44_RS00695 PF13247 4Fe-4S dicluster domain CR44_RS00700 PF00221 Aromatic amino acid lyase CR44_RS00710 PF04205 FMN-binding domain CR44_RS00710 PF00890 FAD binding domain CR44_RS00725 PF00512 His Kinase A (phospho-acceptor) domain CR44_RS00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS00730 PF00486 Transcriptional regulatory protein, C terminal CR44_RS00730 PF00072 Response regulator receiver domain CR44_RS00740 PF01967 MoaC family CR44_RS00760 PF03605 Anaerobic c4-dicarboxylate membrane transporter CR44_RS00765 PF05992 SbmA/BacA-like family CR44_RS00770 PF01435 Peptidase family M48 CR44_RS00775 PF02652 L-lactate permease CR44_RS00780 PF00571 CBS domain CR44_RS00780 PF01595 Cyclin M transmembrane N-terminal domain CR44_RS00780 PF03471 Transporter associated domain CR44_RS00815 PF00005 ABC transporter CR44_RS00835 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CR44_RS00840 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CR44_RS00845 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CR44_RS00845 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CR44_RS00855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CR44_RS00855 PF10531 SLBB domain CR44_RS00855 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CR44_RS00860 PF00384 Molybdopterin oxidoreductase CR44_RS00860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CR44_RS00860 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CR44_RS00865 PF00146 NADH dehydrogenase CR44_RS00870 PF12838 4Fe-4S dicluster domain CR44_RS00875 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CR44_RS00880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CR44_RS00885 PF00361 Proton-conducting membrane transporter CR44_RS00885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CR44_RS00890 PF00361 Proton-conducting membrane transporter CR44_RS00895 PF00361 Proton-conducting membrane transporter CR44_RS00905 PF01891 Cobalt uptake substrate-specific transmembrane region CR44_RS00920 PF00005 ABC transporter CR44_RS00925 PF01131 DNA topoisomerase CR44_RS00925 PF01751 Toprim domain CR44_RS00925 PF01396 Topoisomerase DNA binding C4 zinc finger CR44_RS00930 PF06968 Biotin and Thiamin Synthesis associated domain CR44_RS00930 PF04055 Radical SAM superfamily CR44_RS00935 PF02254 TrkA-N domain CR44_RS00935 PF00999 Sodium/hydrogen exchanger family CR44_RS00935 PF02080 TrkA-C domain CR44_RS00940 PF00285 Citrate synthase, C-terminal domain CR44_RS00945 PF00459 Inositol monophosphatase family CR44_RS00950 PF12849 PBP superfamily domain CR44_RS00955 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS00960 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS00965 PF00005 ABC transporter CR44_RS00970 PF07690 Major Facilitator Superfamily CR44_RS00975 PF13426 PAS domain CR44_RS00975 PF08447 PAS fold CR44_RS00975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS00995 PF03453 MoeA N-terminal region (domain I and II) CR44_RS00995 PF00994 Probable molybdopterin binding domain CR44_RS00995 PF03454 MoeA C-terminal region (domain IV) CR44_RS01010 PF02391 MoaE protein CR44_RS01025 PF00330 Aconitase family (aconitate hydratase) CR44_RS01030 PF12804 MobA-like NTP transferase domain CR44_RS01035 PF02253 Phospholipase A1 CR44_RS01050 PF00113 Enolase, C-terminal TIM barrel domain CR44_RS01050 PF03952 Enolase, N-terminal domain CR44_RS01055 PF00154 recA bacterial DNA recombination protein CR44_RS01060 PF02621 Menaquinone biosynthesis CR44_RS01070 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CR44_RS01095 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CR44_RS01095 PF13288 DXP reductoisomerase C-terminal domain CR44_RS01095 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CR44_RS01110 PF00814 Glycoprotease family CR44_RS01140 PF04055 Radical SAM superfamily CR44_RS01140 PF06463 Molybdenum Cofactor Synthesis C CR44_RS01150 PF00465 Iron-containing alcohol dehydrogenase CR44_RS01180 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CR44_RS01180 PF01612 3'-5' exonuclease CR44_RS01180 PF01367 5'-3' exonuclease, C-terminal SAM fold CR44_RS01180 PF00476 DNA polymerase family A CR44_RS01185 PF01618 MotA/TolQ/ExbB proton channel family CR44_RS01190 PF13677 Membrane MotB of proton-channel complex MotA/MotB CR44_RS01190 PF00691 OmpA family CR44_RS01195 PF00037 4Fe-4S binding domain CR44_RS01200 PF00334 Nucleoside diphosphate kinase CR44_RS01210 PF01783 Ribosomal L32p protein family CR44_RS01215 PF02504 Fatty acid synthesis protein CR44_RS01220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CR44_RS01220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CR44_RS01235 PF02660 Glycerol-3-phosphate acyltransferase CR44_RS01245 PF00072 Response regulator receiver domain CR44_RS01245 PF00486 Transcriptional regulatory protein, C terminal CR44_RS01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS01250 PF00512 His Kinase A (phospho-acceptor) domain CR44_RS01255 PF00037 4Fe-4S binding domain CR44_RS01270 PF01207 Dihydrouridine synthase (Dus) CR44_RS01285 PF02590 Predicted SPOUT methyltransferase CR44_RS01290 PF01039 Carboxyl transferase domain CR44_RS01290 PF17848 Acetyl-coA carboxylase zinc finger domain CR44_RS01295 PF10417 C-terminal domain of 1-Cys peroxiredoxin CR44_RS01295 PF00578 AhpC/TSA family CR44_RS01305 PF00266 Aminotransferase class-V CR44_RS01310 PF13742 OB-fold nucleic acid binding domain CR44_RS01310 PF02601 Exonuclease VII, large subunit CR44_RS01315 PF01209 ubiE/COQ5 methyltransferase family CR44_RS01330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CR44_RS01335 PF00005 ABC transporter CR44_RS01355 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CR44_RS01355 PF02779 Transketolase, pyrimidine binding domain CR44_RS01355 PF02780 Transketolase, C-terminal domain CR44_RS01365 PF14841 FliG middle domain CR44_RS01365 PF14842 FliG N-terminal domain CR44_RS01365 PF01706 FliG C-terminal domain CR44_RS01370 PF01514 Secretory protein of YscJ/FliF family CR44_RS01370 PF08345 Flagellar M-ring protein C-terminal CR44_RS01375 PF00155 Aminotransferase class I and II CR44_RS01380 PF01817 Chorismate mutase type II CR44_RS01380 PF01842 ACT domain CR44_RS01380 PF00800 Prephenate dehydratase CR44_RS01385 PF13344 Haloacid dehalogenase-like hydrolase CR44_RS01390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CR44_RS01390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CR44_RS01405 PF01725 Ham1 family CR44_RS01415 PF00296 Luciferase-like monooxygenase CR44_RS01420 PF01497 Periplasmic binding protein CR44_RS01425 PF01032 FecCD transport family CR44_RS01430 PF00005 ABC transporter CR44_RS01435 PF05958 tRNA (Uracil-5-)-methyltransferase CR44_RS01440 PF01618 MotA/TolQ/ExbB proton channel family CR44_RS01445 PF02472 Biopolymer transport protein ExbD/TolR CR44_RS01455 PF16653 Saccharopine dehydrogenase C-terminal domain CR44_RS01455 PF03435 Saccharopine dehydrogenase NADP binding domain CR44_RS01465 PF01197 Ribosomal protein L31 CR44_RS01470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CR44_RS01475 PF00588 SpoU rRNA Methylase family CR44_RS01475 PF08032 RNA 2'-O ribose methyltransferase substrate binding CR44_RS01490 PF00155 Aminotransferase class I and II CR44_RS01495 PF01842 ACT domain CR44_RS01495 PF00742 Homoserine dehydrogenase CR44_RS01495 PF03447 Homoserine dehydrogenase, NAD binding domain CR44_RS01500 PF02021 Uncharacterised protein family UPF0102 CR44_RS01505 PF00085 Thioredoxin CR44_RS01510 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR44_RS01520 PF05173 Dihydrodipicolinate reductase, C-terminus CR44_RS01520 PF01113 Dihydrodipicolinate reductase, N-terminus CR44_RS01525 PF00156 Phosphoribosyl transferase domain CR44_RS01540 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CR44_RS01540 PF01502 Phosphoribosyl-AMP cyclohydrolase CR44_RS01550 PF01063 Amino-transferase class IV CR44_RS01585 PF00578 AhpC/TSA family CR44_RS01595 PF02677 Epoxyqueuosine reductase QueH CR44_RS01600 PF04224 Protein of unknown function, DUF417 CR44_RS01605 PF07977 FabA-like domain CR44_RS01610 PF00132 Bacterial transferase hexapeptide (six repeats) CR44_RS01610 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CR44_RS01615 PF07724 AAA domain (Cdc48 subfamily) CR44_RS01615 PF10431 C-terminal, D2-small domain, of ClpB protein CR44_RS01615 PF06689 ClpX C4-type zinc finger CR44_RS01630 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CR44_RS01630 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CR44_RS01630 PF02142 MGS-like domain CR44_RS01645 PF13426 PAS domain CR44_RS01645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS01645 PF08447 PAS fold CR44_RS01655 PF00899 ThiF family CR44_RS01660 PF01975 Survival protein SurE CR44_RS01665 PF02684 Lipid-A-disaccharide synthetase CR44_RS01680 PF01272 Transcription elongation factor, GreA/GreB, C-term CR44_RS01680 PF03449 Transcription elongation factor, N-terminal CR44_RS01685 PF01118 Semialdehyde dehydrogenase, NAD binding domain CR44_RS01685 PF02774 Semialdehyde dehydrogenase, dimerisation domain CR44_RS01695 PF01584 CheW-like domain CR44_RS01695 PF00072 Response regulator receiver domain CR44_RS01700 PF00072 Response regulator receiver domain CR44_RS01700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS01700 PF02895 Signal transducing histidine kinase, homodimeric domain CR44_RS01700 PF01584 CheW-like domain CR44_RS01700 PF01627 Hpt domain CR44_RS01705 PF01584 CheW-like domain CR44_RS01715 PF00923 Transaldolase/Fructose-6-phosphate aldolase CR44_RS01720 PF00437 Type II/IV secretion system protein CR44_RS01725 PF14693 Ribosomal protein TL5, C-terminal domain CR44_RS01725 PF01386 Ribosomal L25p family CR44_RS01730 PF01195 Peptidyl-tRNA hydrolase CR44_RS01735 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CR44_RS01745 PF02769 AIR synthase related protein, C-terminal domain CR44_RS01745 PF00586 AIR synthase related protein, N-terminal domain CR44_RS01750 PF00881 Nitroreductase family CR44_RS01755 PF01312 FlhB HrpN YscU SpaS Family CR44_RS01760 PF06965 Na+/H+ antiporter 1 CR44_RS01765 PF17755 UvrA DNA-binding domain CR44_RS01765 PF17760 UvrA interaction domain CR44_RS01795 PF04715 Anthranilate synthase component I, N terminal region CR44_RS01795 PF00425 chorismate binding enzyme CR44_RS01800 PF00591 Glycosyl transferase family, a/b domain CR44_RS01800 PF02885 Glycosyl transferase family, helical bundle domain CR44_RS01800 PF00117 Glutamine amidotransferase class-I CR44_RS01805 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CR44_RS01810 PF00291 Pyridoxal-phosphate dependent enzyme CR44_RS01815 PF00290 Tryptophan synthase alpha chain CR44_RS01825 PF04509 CheC-like family CR44_RS01825 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CR44_RS01840 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS01845 PF00005 ABC transporter CR44_RS01845 PF08402 TOBE domain CR44_RS01885 PF00563 EAL domain CR44_RS01885 PF00990 Diguanylate cyclase, GGDEF domain CR44_RS01885 PF13188 PAS domain CR44_RS01885 PF03707 Bacterial signalling protein N terminal repeat CR44_RS01890 PF13393 Histidyl-tRNA synthetase CR44_RS01895 PF00709 Adenylosuccinate synthetase CR44_RS01915 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CR44_RS01915 PF00117 Glutamine amidotransferase class-I CR44_RS01925 PF00989 PAS fold CR44_RS01925 PF00512 His Kinase A (phospho-acceptor) domain CR44_RS01925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS01930 PF00486 Transcriptional regulatory protein, C terminal CR44_RS01930 PF00072 Response regulator receiver domain CR44_RS01935 PF00115 Cytochrome C and Quinol oxidase polypeptide I CR44_RS01950 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CR44_RS01950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CR44_RS01975 PF00580 UvrD/REP helicase N-terminal domain CR44_RS01975 PF13361 UvrD-like helicase C-terminal domain CR44_RS01975 PF12705 PD-(D/E)XK nuclease superfamily CR44_RS01980 PF00572 Ribosomal protein L13 CR44_RS01985 PF00380 Ribosomal protein S9/S16 CR44_RS01990 PF00691 OmpA family CR44_RS01990 PF13488 Glycine zipper CR44_RS01995 PF05552 Conserved TM helix CR44_RS01995 PF00924 Mechanosensitive ion channel CR44_RS02000 PF13419 Haloacid dehalogenase-like hydrolase CR44_RS02005 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CR44_RS02005 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CR44_RS02005 PF10371 Domain of unknown function CR44_RS02005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CR44_RS02005 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CR44_RS02025 PF05538 Campylobacter major outer membrane protein CR44_RS02030 PF05538 Campylobacter major outer membrane protein CR44_RS02040 PF13458 Periplasmic binding protein CR44_RS02045 PF02653 Branched-chain amino acid transport system / permease component CR44_RS02050 PF11862 Domain of unknown function (DUF3382) CR44_RS02050 PF02653 Branched-chain amino acid transport system / permease component CR44_RS02055 PF12399 Branched-chain amino acid ATP-binding cassette transporter CR44_RS02055 PF00005 ABC transporter CR44_RS02060 PF00005 ABC transporter CR44_RS02065 PF01578 Cytochrome C assembly protein CR44_RS02065 PF05140 ResB-like family CR44_RS02075 PF04608 Phosphatidylglycerophosphatase A CR44_RS02080 PF14306 PUA-like domain CR44_RS02080 PF01747 ATP-sulfurylase CR44_RS02085 PF00486 Transcriptional regulatory protein, C terminal CR44_RS02085 PF00072 Response regulator receiver domain CR44_RS02090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CR44_RS02090 PF02542 YgbB family CR44_RS02095 PF01964 Radical SAM ThiC family CR44_RS02100 PF10609 NUBPL iron-transfer P-loop NTPase CR44_RS02100 PF01883 Iron-sulfur cluster assembly protein CR44_RS02105 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CR44_RS02105 PF14602 Hexapeptide repeat of succinyl-transferase CR44_RS02110 PF00005 ABC transporter CR44_RS02110 PF12848 ABC transporter CR44_RS02115 PF13085 2Fe-2S iron-sulfur cluster binding domain CR44_RS02115 PF13183 4Fe-4S dicluster domain CR44_RS02120 PF00890 FAD binding domain CR44_RS02120 PF02910 Fumarate reductase flavoprotein C-term CR44_RS02125 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CR44_RS02130 PF01790 Prolipoprotein diacylglyceryl transferase CR44_RS02140 PF11798 IMS family HHH motif CR44_RS02140 PF11799 impB/mucB/samB family C-terminal domain CR44_RS02140 PF00817 impB/mucB/samB family CR44_RS02145 PF00403 Heavy-metal-associated domain CR44_RS02160 PF03222 Tryptophan/tyrosine permease family CR44_RS02165 PF01709 Transcriptional regulator CR44_RS02170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CR44_RS02175 PF00375 Sodium:dicarboxylate symporter family CR44_RS02180 PF00375 Sodium:dicarboxylate symporter family CR44_RS02185 PF00027 Cyclic nucleotide-binding domain CR44_RS02185 PF13545 Crp-like helix-turn-helix domain CR44_RS02190 PF18364 Molybdopterin oxidoreductase N-terminal domain CR44_RS02190 PF00384 Molybdopterin oxidoreductase CR44_RS02190 PF01568 Molydopterin dinucleotide binding domain CR44_RS02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS02200 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CR44_RS02200 PF00072 Response regulator receiver domain CR44_RS02200 PF01627 Hpt domain CR44_RS02200 PF00672 HAMP domain CR44_RS02200 PF00512 His Kinase A (phospho-acceptor) domain CR44_RS02205 PF00486 Transcriptional regulatory protein, C terminal CR44_RS02205 PF00072 Response regulator receiver domain CR44_RS02210 PF01323 DSBA-like thioredoxin domain CR44_RS02215 PF02600 Disulfide bond formation protein DsbB CR44_RS02225 PF17425 Arylsulfotransferase Ig-like domain CR44_RS02225 PF05935 Arylsulfotransferase (ASST) CR44_RS02230 PF00350 Dynamin family CR44_RS02235 PF00350 Dynamin family CR44_RS02245 PF18793 Nitrous oxide reductase propeller repeat 2 CR44_RS02245 PF13473 Cupredoxin-like domain CR44_RS02245 PF18764 Nitrous oxide reductase propeller repeat CR44_RS02260 PF12838 4Fe-4S dicluster domain CR44_RS02260 PF12800 4Fe-4S binding domain CR44_RS02275 PF13237 4Fe-4S dicluster domain CR44_RS02275 PF12801 4Fe-4S binding domain CR44_RS02280 PF00005 ABC transporter CR44_RS02280 PF08402 TOBE domain CR44_RS02305 PF00072 Response regulator receiver domain CR44_RS02305 PF00486 Transcriptional regulatory protein, C terminal CR44_RS02340 PF00005 ABC transporter CR44_RS02340 PF00664 ABC transporter transmembrane region CR44_RS02375 PF02548 Ketopantoate hydroxymethyltransferase CR44_RS02385 PF17864 RuvB AAA lid domain CR44_RS02385 PF05491 RuvB C-terminal winged helix domain CR44_RS02385 PF05496 Holliday junction DNA helicase RuvB P-loop domain CR44_RS02390 PF01594 AI-2E family transporter CR44_RS02395 PF02405 Permease MlaE CR44_RS02400 PF00005 ABC transporter CR44_RS02415 PF02130 Uncharacterized protein family UPF0054 CR44_RS02440 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CR44_RS02495 PF00534 Glycosyl transferases group 1 CR44_RS02495 PF13439 Glycosyltransferase Family 4 CR44_RS02510 PF00005 ABC transporter CR44_RS02520 PF09318 Glycosyl transferase 1 domain A CR44_RS02520 PF00534 Glycosyl transferases group 1 CR44_RS02525 PF02397 Bacterial sugar transferase CR44_RS02530 PF18073 Rubredoxin metal binding domain CR44_RS02535 PF00448 SRP54-type protein, GTPase domain CR44_RS02540 PF00578 AhpC/TSA family CR44_RS02550 PF12072 Domain of unknown function (DUF3552) CR44_RS02550 PF01966 HD domain CR44_RS02595 PF00672 HAMP domain CR44_RS02595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS02595 PF17200 Single Cache domain 2 CR44_RS02600 PF00202 Aminotransferase class-III CR44_RS02605 PF00730 HhH-GPD superfamily base excision DNA repair protein CR44_RS02605 PF00633 Helix-hairpin-helix motif CR44_RS02605 PF10576 Iron-sulfur binding domain of endonuclease III CR44_RS02615 PF01116 Fructose-bisphosphate aldolase class-II CR44_RS02635 PF00815 Histidinol dehydrogenase CR44_RS02640 PF00669 Bacterial flagellin N-terminal helical region CR44_RS02645 PF04545 Sigma-70, region 4 CR44_RS02645 PF04539 Sigma-70 region 3 CR44_RS02645 PF04542 Sigma-70 region 2 CR44_RS02645 PF00140 Sigma-70 factor, region 1.2 CR44_RS02650 PF00460 Flagella basal body rod protein CR44_RS02650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CR44_RS02655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CR44_RS02655 PF00460 Flagella basal body rod protein CR44_RS02660 PF03239 Iron permease FTR1 family CR44_RS02665 PF10634 Fe2+ transport protein CR44_RS02685 PF00005 ABC transporter CR44_RS02685 PF12704 MacB-like periplasmic core domain CR44_RS02685 PF02687 FtsX-like permease family CR44_RS02695 PF04371 Porphyromonas-type peptidyl-arginine deiminase CR44_RS02700 PF16916 Dimerisation domain of Zinc Transporter CR44_RS02700 PF01545 Cation efflux family CR44_RS02705 PF00795 Carbon-nitrogen hydrolase CR44_RS02710 PF03616 Sodium/glutamate symporter CR44_RS02720 PF01554 MatE CR44_RS02725 PF00512 His Kinase A (phospho-acceptor) domain CR44_RS02725 PF07689 KaiB domain CR44_RS02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS02730 PF00486 Transcriptional regulatory protein, C terminal CR44_RS02730 PF00072 Response regulator receiver domain CR44_RS02735 PF00083 Sugar (and other) transporter CR44_RS02735 PF08946 Osmosensory transporter coiled coil CR44_RS02740 PF00005 ABC transporter CR44_RS02740 PF16326 ABC transporter C-terminal domain CR44_RS02740 PF12848 ABC transporter CR44_RS02745 PF00209 Sodium:neurotransmitter symporter family CR44_RS02750 PF01435 Peptidase family M48 CR44_RS02750 PF16491 CAAX prenyl protease N-terminal, five membrane helices CR44_RS02755 PF17827 PrmC N-terminal domain CR44_RS02755 PF05175 Methyltransferase small domain CR44_RS02770 PF03061 Thioesterase superfamily CR44_RS02790 PF00909 Ammonium Transporter Family CR44_RS02795 PF00543 Nitrogen regulatory protein P-II CR44_RS02800 PF00468 Ribosomal protein L34 CR44_RS02805 PF00825 Ribonuclease P CR44_RS02810 PF01809 Putative membrane protein insertion efficiency factor CR44_RS02815 PF14849 YidC periplasmic domain CR44_RS02815 PF02096 60Kd inner membrane protein CR44_RS02825 PF01926 50S ribosome-binding GTPase CR44_RS02825 PF12631 MnmE helical domain CR44_RS02825 PF10396 GTP-binding protein TrmE N-terminus CR44_RS02830 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CR44_RS02830 PF00586 AIR synthase related protein, N-terminal domain CR44_RS02830 PF02769 AIR synthase related protein, C-terminal domain CR44_RS02835 PF00226 DnaJ domain CR44_RS02835 PF05099 Tellurite resistance protein TerB CR44_RS02840 PF01808 AICARFT/IMPCHase bienzyme CR44_RS02840 PF02142 MGS-like domain CR44_RS02855 PF01883 Iron-sulfur cluster assembly protein CR44_RS02860 PF00672 HAMP domain CR44_RS02860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS02885 PF01795 MraW methylase family CR44_RS02895 PF13145 PPIC-type PPIASE domain CR44_RS02900 PF02491 SHS2 domain inserted in FTSA CR44_RS02905 PF12327 FtsZ family, C-terminal domain CR44_RS02905 PF00091 Tubulin/FtsZ family, GTPase domain CR44_RS02915 PF05970 PIF1-like helicase CR44_RS02915 PF02689 Helicase CR44_RS02925 PF03548 Outer membrane lipoprotein carrier protein LolA CR44_RS02930 PF02810 SEC-C motif CR44_RS02930 PF07516 SecA Wing and Scaffold domain CR44_RS02930 PF01043 SecA preprotein cross-linking domain CR44_RS02930 PF07517 SecA DEAD-like domain CR44_RS02935 PF12704 MacB-like periplasmic core domain CR44_RS02935 PF02687 FtsX-like permease family CR44_RS02950 PF07690 Major Facilitator Superfamily CR44_RS02960 PF00860 Permease family CR44_RS02965 PF04055 Radical SAM superfamily CR44_RS02970 PF08335 GlnD PII-uridylyltransferase CR44_RS02970 PF01966 HD domain CR44_RS02970 PF01909 Nucleotidyltransferase domain CR44_RS02975 PF01380 SIS domain CR44_RS02980 PF04143 Sulphur transport CR44_RS02985 PF01206 Sulfurtransferase TusA CR44_RS02990 PF01177 Asp/Glu/Hydantoin racemase CR44_RS02995 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CR44_RS03065 PF00990 Diguanylate cyclase, GGDEF domain CR44_RS03065 PF00072 Response regulator receiver domain CR44_RS03075 PF00994 Probable molybdopterin binding domain CR44_RS03075 PF02464 Competence-damaged protein CR44_RS03085 PF08264 Anticodon-binding domain of tRNA CR44_RS03085 PF00133 tRNA synthetases class I (I, L, M and V) CR44_RS03090 PF01425 Amidase CR44_RS03095 PF00478 IMP dehydrogenase / GMP reductase domain CR44_RS03095 PF00571 CBS domain CR44_RS03100 PF00561 alpha/beta hydrolase fold CR44_RS03105 PF02609 Exonuclease VII small subunit CR44_RS03115 PF08245 Mur ligase middle domain CR44_RS03115 PF01225 Mur ligase family, catalytic domain CR44_RS03115 PF02875 Mur ligase family, glutamate ligase domain CR44_RS03125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CR44_RS03130 PF00005 ABC transporter CR44_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS03155 PF00488 MutS domain V CR44_RS03155 PF01713 Smr domain CR44_RS03160 PF08495 FIST N domain CR44_RS03160 PF00990 Diguanylate cyclase, GGDEF domain CR44_RS03160 PF10442 FIST C domain CR44_RS03160 PF00563 EAL domain CR44_RS03170 PF01546 Peptidase family M20/M25/M40 CR44_RS03170 PF07687 Peptidase dimerisation domain CR44_RS03175 PF06039 Malate:quinone oxidoreductase (Mqo) CR44_RS03185 PF00391 PEP-utilising enzyme, mobile domain CR44_RS03185 PF00224 Pyruvate kinase, barrel domain CR44_RS03185 PF02887 Pyruvate kinase, alpha/beta domain CR44_RS03190 PF05193 Peptidase M16 inactive domain CR44_RS03195 PF00271 Helicase conserved C-terminal domain CR44_RS03195 PF04851 Type III restriction enzyme, res subunit CR44_RS03200 PF01474 Class-II DAHP synthetase family CR44_RS03205 PF00171 Aldehyde dehydrogenase family CR44_RS03220 PF05175 Methyltransferase small domain CR44_RS03220 PF08468 Methyltransferase small domain N-terminal CR44_RS03225 PF03692 Putative zinc- or iron-chelating domain CR44_RS03235 PF00218 Indole-3-glycerol phosphate synthase CR44_RS03245 PF03883 Peroxide stress protein YaaA CR44_RS03320 PF01867 CRISPR associated protein Cas1 CR44_RS03340 PF02785 Biotin carboxylase C-terminal domain CR44_RS03340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CR44_RS03340 PF00289 Biotin carboxylase, N-terminal domain CR44_RS03350 PF04377 Arginine-tRNA-protein transferase, C terminus CR44_RS03350 PF04376 Arginine-tRNA-protein transferase, N terminus CR44_RS03355 PF00684 DnaJ central domain CR44_RS03355 PF01556 DnaJ C terminal domain CR44_RS03355 PF00226 DnaJ domain CR44_RS03360 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CR44_RS03365 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CR44_RS03370 PF01384 Phosphate transporter family CR44_RS03375 PF00669 Bacterial flagellin N-terminal helical region CR44_RS03375 PF00700 Bacterial flagellin C-terminal helical region CR44_RS03380 PF17854 FtsK alpha domain CR44_RS03380 PF09397 Ftsk gamma domain CR44_RS03380 PF01580 FtsK/SpoIIIE family CR44_RS03395 PF00348 Polyprenyl synthetase CR44_RS03400 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CR44_RS03400 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CR44_RS03400 PF01488 Shikimate / quinate 5-dehydrogenase CR44_RS03405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CR44_RS03405 PF03129 Anticodon binding domain CR44_RS03405 PF04073 Aminoacyl-tRNA editing domain CR44_RS03415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CR44_RS03415 PF03900 Porphobilinogen deaminase, C-terminal domain CR44_RS03420 PF03631 Virulence factor BrkB CR44_RS03425 PF02913 FAD linked oxidases, C-terminal domain CR44_RS03425 PF01565 FAD binding domain CR44_RS03435 PF08525 Opacity-associated protein A N-terminal motif CR44_RS03435 PF01476 LysM domain CR44_RS03435 PF01551 Peptidase family M23 CR44_RS03440 PF00571 CBS domain CR44_RS03440 PF01769 Divalent cation transporter CR44_RS03440 PF03448 MgtE intracellular N domain CR44_RS03445 PF00293 NUDIX domain CR44_RS03455 PF00166 Chaperonin 10 Kd subunit CR44_RS03460 PF00118 TCP-1/cpn60 chaperonin family CR44_RS03465 PF00762 Ferrochelatase CR44_RS03470 PF03717 Penicillin-binding Protein dimerisation domain CR44_RS03470 PF00905 Penicillin binding protein transpeptidase domain CR44_RS03475 PF02049 Flagellar hook-basal body complex protein FliE CR44_RS03480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CR44_RS03480 PF00460 Flagella basal body rod protein CR44_RS03485 PF00460 Flagella basal body rod protein CR44_RS03490 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CR44_RS03500 PF00004 ATPase family associated with various cellular activities (AAA) CR44_RS03500 PF07724 AAA domain (Cdc48 subfamily) CR44_RS03500 PF17871 AAA lid domain CR44_RS03500 PF02861 Clp amino terminal domain, pathogenicity island component CR44_RS03500 PF10431 C-terminal, D2-small domain, of ClpB protein CR44_RS03505 PF02617 ATP-dependent Clp protease adaptor protein ClpS CR44_RS03515 PF01668 SmpB protein CR44_RS03520 PF00288 GHMP kinases N terminal domain CR44_RS03525 PF02599 Global regulator protein family CR44_RS03530 PF01509 TruB family pseudouridylate synthase (N terminal domain) CR44_RS03535 PF00580 UvrD/REP helicase N-terminal domain CR44_RS03535 PF13361 UvrD-like helicase C-terminal domain CR44_RS03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CR44_RS03555 PF00375 Sodium:dicarboxylate symporter family CR44_RS03560 PF02773 S-adenosylmethionine synthetase, C-terminal domain CR44_RS03560 PF02772 S-adenosylmethionine synthetase, central domain CR44_RS03560 PF00438 S-adenosylmethionine synthetase, N-terminal domain CR44_RS03565 PF01297 Zinc-uptake complex component A periplasmic CR44_RS03570 PF00005 ABC transporter CR44_RS03575 PF00950 ABC 3 transport family CR44_RS03580 PF00950 ABC 3 transport family CR44_RS03590 PF02699 Preprotein translocase subunit CR44_RS03595 PF02355 Protein export membrane protein CR44_RS03600 PF07549 SecD/SecF GG Motif CR44_RS03600 PF02355 Protein export membrane protein CR44_RS03610 PF13603 Leucyl-tRNA synthetase, Domain 2 CR44_RS03610 PF00133 tRNA synthetases class I (I, L, M and V) CR44_RS03610 PF09334 tRNA synthetases class I (M) CR44_RS03620 PF00990 Diguanylate cyclase, GGDEF domain CR44_RS03625 PF02875 Mur ligase family, glutamate ligase domain CR44_RS03625 PF08245 Mur ligase middle domain CR44_RS03630 PF04225 Opacity-associated protein A LysM-like domain CR44_RS03630 PF01551 Peptidase family M23 CR44_RS03640 PF00270 DEAD/DEAH box helicase CR44_RS03640 PF00271 Helicase conserved C-terminal domain CR44_RS03640 PF03461 TRCF domain CR44_RS03640 PF17757 UvrB interaction domain CR44_RS03640 PF02559 CarD-like/TRCF domain CR44_RS03670 PF13291 ACT domain CR44_RS03670 PF00291 Pyridoxal-phosphate dependent enzyme CR44_RS03680 PF17287 POTRA domain CR44_RS03680 PF08479 POTRA domain, ShlB-type CR44_RS03680 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CR44_RS03685 PF01416 tRNA pseudouridine synthase CR44_RS03695 PF01478 Type IV leader peptidase family CR44_RS03695 PF06750 Bacterial Peptidase A24 N-terminal domain CR44_RS03700 PF01255 Putative undecaprenyl diphosphate synthase CR44_RS03710 PF02441 Flavoprotein CR44_RS03710 PF04127 DNA / pantothenate metabolism flavoprotein CR44_RS03715 PF12804 MobA-like NTP transferase domain CR44_RS03715 PF00132 Bacterial transferase hexapeptide (six repeats) CR44_RS03720 PF00813 FliP family CR44_RS03735 PF02445 Quinolinate synthetase A protein CR44_RS03740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CR44_RS03745 PF12704 MacB-like periplasmic core domain CR44_RS03745 PF02687 FtsX-like permease family CR44_RS03745 PF00005 ABC transporter CR44_RS03750 PF02321 Outer membrane efflux protein CR44_RS03765 PF00486 Transcriptional regulatory protein, C terminal CR44_RS03765 PF00072 Response regulator receiver domain CR44_RS03770 PF17820 PDZ domain CR44_RS03770 PF13180 PDZ domain CR44_RS03775 PF00226 DnaJ domain CR44_RS03775 PF01556 DnaJ C terminal domain CR44_RS03780 PF13411 MerR HTH family regulatory protein CR44_RS03785 PF00999 Sodium/hydrogen exchanger family CR44_RS03785 PF02254 TrkA-N domain CR44_RS03790 PF02080 TrkA-C domain CR44_RS03790 PF00999 Sodium/hydrogen exchanger family CR44_RS03790 PF03471 Transporter associated domain CR44_RS03800 PF01925 Sulfite exporter TauE/SafE CR44_RS03805 PF00119 ATP synthase A chain CR44_RS03815 PF02581 Thiamine monophosphate synthase CR44_RS03820 PF02934 GatB/GatE catalytic domain CR44_RS03820 PF02637 GatB domain CR44_RS03825 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CR44_RS03825 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CR44_RS03830 PF00933 Glycosyl hydrolase family 3 N terminal domain CR44_RS03840 PF00892 EamA-like transporter family CR44_RS03845 PF00005 ABC transporter CR44_RS03850 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS03855 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR44_RS03860 PF01066 CDP-alcohol phosphatidyltransferase CR44_RS03870 PF00701 Dihydrodipicolinate synthetase family CR44_RS03875 PF00675 Insulinase (Peptidase family M16) CR44_RS03875 PF05193 Peptidase M16 inactive domain CR44_RS03880 PF01180 Dihydroorotate dehydrogenase CR44_RS03885 PF00005 ABC transporter CR44_RS03885 PF00664 ABC transporter transmembrane region CR44_RS03890 PF09190 DALR domain CR44_RS03890 PF01406 tRNA synthetases class I (C) catalytic domain CR44_RS03895 PF03023 Lipid II flippase MurJ CR44_RS03905 PF04851 Type III restriction enzyme, res subunit CR44_RS03905 PF08774 VRR-NUC domain CR44_RS03910 PF01555 DNA methylase CR44_RS03910 PF18273 Type III R-M EcoP15I C-terminal domain CR44_RS03930 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CR44_RS03940 PF09334 tRNA synthetases class I (M) CR44_RS03940 PF01588 Putative tRNA binding domain CR44_RS03940 PF00133 tRNA synthetases class I (I, L, M and V) CR44_RS03970 PF01568 Molydopterin dinucleotide binding domain CR44_RS03970 PF00384 Molybdopterin oxidoreductase CR44_RS03970 PF18364 Molybdopterin oxidoreductase N-terminal domain CR44_RS03975 PF04055 Radical SAM superfamily CR44_RS03990 PF01739 CheR methyltransferase, SAM binding domain CR44_RS03995 PF01339 CheB methylesterase CR44_RS03995 PF00072 Response regulator receiver domain CR44_RS04005 PF07499 RuvA, C-terminal domain CR44_RS04005 PF01330 RuvA N terminal domain CR44_RS04010 PF07478 D-ala D-ala ligase C-terminus CR44_RS04010 PF01820 D-ala D-ala ligase N-terminus CR44_RS04025 PF08245 Mur ligase middle domain CR44_RS04025 PF02875 Mur ligase family, glutamate ligase domain CR44_RS04030 PF00871 Acetokinase family CR44_RS04035 PF01515 Phosphate acetyl/butaryl transferase CR44_RS04040 PF02107 Flagellar L-ring protein CR44_RS04050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CR44_RS04050 PF00205 Thiamine pyrophosphate enzyme, central domain CR44_RS04050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CR44_RS04055 PF10369 Small subunit of acetolactate synthase CR44_RS04060 PF00132 Bacterial transferase hexapeptide (six repeats) CR44_RS04060 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CR44_RS04070 PF09335 SNARE associated Golgi protein CR44_RS04075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CR44_RS04075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CR44_RS04080 PF01842 ACT domain CR44_RS04080 PF00551 Formyl transferase CR44_RS04085 PF00588 SpoU rRNA Methylase family CR44_RS04090 PF04461 Protein of unknown function (DUF520) CR44_RS04095 PF02092 Glycyl-tRNA synthetase beta subunit CR44_RS04105 PF00206 Lyase CR44_RS04105 PF10397 Adenylosuccinate lyase C-terminus CR44_RS04110 PF00939 Sodium:sulfate symporter transmembrane region CR44_RS04130 PF01235 Sodium:alanine symporter family CR44_RS04135 PF00403 Heavy-metal-associated domain CR44_RS04170 PF01551 Peptidase family M23 CR44_RS04170 PF01476 LysM domain CR44_RS04170 PF08525 Opacity-associated protein A N-terminal motif CR44_RS04180 PF00486 Transcriptional regulatory protein, C terminal CR44_RS04180 PF00072 Response regulator receiver domain CR44_RS04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS04190 PF00764 Arginosuccinate synthase CR44_RS04195 PF18644 Phage integrase SAM-like domain CR44_RS04195 PF00589 Phage integrase family CR44_RS04200 PF01098 Cell cycle protein CR44_RS04205 PF04101 Glycosyltransferase family 28 C-terminal domain CR44_RS04205 PF03033 Glycosyltransferase family 28 N-terminal domain CR44_RS04210 PF00216 Bacterial DNA-binding protein CR44_RS04215 PF01618 MotA/TolQ/ExbB proton channel family CR44_RS04220 PF02472 Biopolymer transport protein ExbD/TolR CR44_RS04230 PF01479 S4 domain CR44_RS04235 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CR44_RS04240 PF00005 ABC transporter CR44_RS04245 PF04552 Sigma-54, DNA binding domain CR44_RS04245 PF04963 Sigma-54 factor, core binding domain CR44_RS04245 PF00309 Sigma-54 factor, Activator interacting domain (AID) CR44_RS04250 PF01761 3-dehydroquinate synthase CR44_RS04260 PF04055 Radical SAM superfamily CR44_RS04260 PF00919 Uncharacterized protein family UPF0004 CR44_RS04265 PF06480 FtsH Extracellular CR44_RS04265 PF17862 AAA+ lid domain CR44_RS04265 PF01434 Peptidase family M41 CR44_RS04265 PF00004 ATPase family associated with various cellular activities (AAA) CR44_RS04270 PF00994 Probable molybdopterin binding domain CR44_RS04285 PF00890 FAD binding domain CR44_RS04285 PF14537 Cytochrome c3 CR44_RS04295 PF01168 Alanine racemase, N-terminal domain CR44_RS04300 PF02163 Peptidase family M50 CR44_RS04300 PF17820 PDZ domain CR44_RS04305 PF00834 Ribulose-phosphate 3 epimerase family CR44_RS04315 PF00270 DEAD/DEAH box helicase CR44_RS04315 PF18074 Primosomal protein N C-terminal domain CR44_RS04315 PF17764 3′ DNA-binding domain (3′BD) CR44_RS04315 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CR44_RS04315 PF00271 Helicase conserved C-terminal domain CR44_RS04320 PF00114 Pilin (bacterial filament) CR44_RS04320 PF07963 Prokaryotic N-terminal methylation motif CR44_RS04325 PF08334 Type II secretion system (T2SS), protein G CR44_RS04325 PF07963 Prokaryotic N-terminal methylation motif CR44_RS04335 PF08334 Type II secretion system (T2SS), protein G CR44_RS04335 PF07963 Prokaryotic N-terminal methylation motif CR44_RS04350 PF12344 Ultra-violet resistance protein B CR44_RS04350 PF02151 UvrB/uvrC motif CR44_RS04350 PF17757 UvrB interaction domain CR44_RS04350 PF04851 Type III restriction enzyme, res subunit CR44_RS04350 PF00271 Helicase conserved C-terminal domain CR44_RS04360 PF13090 Polyphosphate kinase C-terminal domain 2 CR44_RS04360 PF02503 Polyphosphate kinase middle domain CR44_RS04360 PF17941 Polyphosphate kinase C-terminal domain 1 CR44_RS04360 PF13089 Polyphosphate kinase N-terminal domain CR44_RS04365 PF01717 Cobalamin-independent synthase, Catalytic domain CR44_RS04365 PF08267 Cobalamin-independent synthase, N-terminal domain CR44_RS04375 PF13847 Methyltransferase domain CR44_RS04375 PF10119 Predicted methyltransferase regulatory domain CR44_RS04380 PF00300 Histidine phosphatase superfamily (branch 1) CR44_RS04385 PF04305 Protein of unknown function (DUF455) CR44_RS04395 PF02754 Cysteine-rich domain CR44_RS04400 PF11870 Domain of unknown function (DUF3390) CR44_RS04400 PF02589 LUD domain CR44_RS04400 PF13183 4Fe-4S dicluster domain CR44_RS04405 PF02589 LUD domain CR44_RS04415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CR44_RS04420 PF03453 MoeA N-terminal region (domain I and II) CR44_RS04420 PF00994 Probable molybdopterin binding domain CR44_RS04420 PF03454 MoeA C-terminal region (domain IV) CR44_RS04435 PF01467 Cytidylyltransferase-like CR44_RS04440 PF02223 Thymidylate kinase CR44_RS04445 PF03129 Anticodon binding domain CR44_RS04445 PF13393 Histidyl-tRNA synthetase CR44_RS04450 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CR44_RS04450 PF17944 Arginine decarboxylase C-terminal helical extension CR44_RS04450 PF17810 Arginine decarboxylase helical bundle domain CR44_RS04455 PF06426 Serine acetyltransferase, N-terminal CR44_RS04455 PF00132 Bacterial transferase hexapeptide (six repeats) CR44_RS04460 PF00155 Aminotransferase class I and II CR44_RS04465 PF00535 Glycosyl transferase family 2 CR44_RS04465 PF01501 Glycosyl transferase family 8 CR44_RS04470 PF00258 Flavodoxin CR44_RS04495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CR44_RS04495 PF00205 Thiamine pyrophosphate enzyme, central domain CR44_RS04495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CR44_RS04500 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CR44_RS04500 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CR44_RS04500 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CR44_RS04510 PF00549 CoA-ligase CR44_RS04510 PF02629 CoA binding domain CR44_RS04515 PF08442 ATP-grasp domain CR44_RS04515 PF00549 CoA-ligase CR44_RS04520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CR44_RS04520 PF00056 lactate/malate dehydrogenase, NAD binding domain CR44_RS04525 PF03971 Monomeric isocitrate dehydrogenase CR44_RS04545 PF00171 Aldehyde dehydrogenase family CR44_RS04550 PF03063 Prismane/CO dehydrogenase family CR44_RS04555 PF01053 Cys/Met metabolism PLP-dependent enzyme CR44_RS04560 PF02082 Transcriptional regulator CR44_RS04565 PF00291 Pyridoxal-phosphate dependent enzyme CR44_RS04570 PF01648 4'-phosphopantetheinyl transferase superfamily CR44_RS04575 PF03748 Flagellar basal body-associated protein FliL CR44_RS04580 PF01557 Fumarylacetoacetate (FAA) hydrolase family CR44_RS04585 PF00202 Aminotransferase class-III CR44_RS04590 PF03458 UPF0126 domain CR44_RS04605 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CR44_RS04610 PF00586 AIR synthase related protein, N-terminal domain CR44_RS04610 PF02769 AIR synthase related protein, C-terminal domain CR44_RS04615 PF01924 Hydrogenase formation hypA family CR44_RS04620 PF01455 HupF/HypC family CR44_RS04625 PF02492 CobW/HypB/UreG, nucleotide-binding domain CR44_RS04630 PF08753 NikR C terminal nickel binding domain CR44_RS04630 PF01402 Ribbon-helix-helix protein, copG family CR44_RS04635 PF00708 Acylphosphatase CR44_RS04635 PF01300 Telomere recombination CR44_RS04635 PF07503 HypF finger CR44_RS04635 PF17788 HypF Kae1-like domain CR44_RS04645 PF01750 Hydrogenase maturation protease CR44_RS04650 PF01292 Prokaryotic cytochrome b561 CR44_RS04655 PF00374 Nickel-dependent hydrogenase CR44_RS04660 PF10518 TAT (twin-arginine translocation) pathway signal sequence CR44_RS04660 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CR44_RS04660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CR44_RS04670 PF03591 AzlC protein CR44_RS04675 PF10431 C-terminal, D2-small domain, of ClpB protein CR44_RS04675 PF02861 Clp amino terminal domain, pathogenicity island component CR44_RS04675 PF17871 AAA lid domain CR44_RS04675 PF07724 AAA domain (Cdc48 subfamily) CR44_RS04675 PF00004 ATPase family associated with various cellular activities (AAA) CR44_RS04680 PF13180 PDZ domain CR44_RS04680 PF03572 Peptidase family S41 CR44_RS04685 PF01259 SAICAR synthetase CR44_RS04690 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CR44_RS04705 PF01553 Acyltransferase CR44_RS04710 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CR44_RS04720 PF03372 Endonuclease/Exonuclease/phosphatase family CR44_RS04725 PF03498 Cytolethal distending toxin A/C domain CR44_RS04730 PF00183 Hsp90 protein CR44_RS04740 PF13649 Methyltransferase domain CR44_RS04745 PF13361 UvrD-like helicase C-terminal domain CR44_RS04745 PF00580 UvrD/REP helicase N-terminal domain CR44_RS04760 PF00206 Lyase CR44_RS04760 PF10415 Fumarase C C-terminus CR44_RS04765 PF10458 Valyl tRNA synthetase tRNA binding arm CR44_RS04765 PF00133 tRNA synthetases class I (I, L, M and V) CR44_RS04765 PF08264 Anticodon-binding domain of tRNA CR44_RS04775 PF00005 ABC transporter CR44_RS04775 PF09383 NIL domain CR44_RS04780 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS04790 PF04851 Type III restriction enzyme, res subunit CR44_RS04795 PF08543 Phosphomethylpyrimidine kinase CR44_RS04795 PF02581 Thiamine monophosphate synthase CR44_RS04800 PF03180 NLPA lipoprotein CR44_RS04805 PF00830 Ribosomal L28 family CR44_RS04815 PF01960 ArgJ family CR44_RS04825 PF02743 Cache domain CR44_RS04825 PF00672 HAMP domain CR44_RS04825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS04830 PF05958 tRNA (Uracil-5-)-methyltransferase CR44_RS04835 PF00106 short chain dehydrogenase CR44_RS04850 PF01702 Queuine tRNA-ribosyltransferase CR44_RS04860 PF00772 DnaB-like helicase N terminal domain CR44_RS04860 PF03796 DnaB-like helicase C terminal domain CR44_RS04865 PF04551 GcpE protein CR44_RS04875 PF01152 Bacterial-like globin CR44_RS04885 PF06434 Aconitate hydratase 2 N-terminus CR44_RS04885 PF11791 Aconitate B N-terminal domain CR44_RS04885 PF00330 Aconitase family (aconitate hydratase) CR44_RS04890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CR44_RS04890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CR44_RS04895 PF00925 GTP cyclohydrolase II CR44_RS04895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CR44_RS04900 PF03948 Ribosomal protein L9, C-terminal domain CR44_RS04900 PF01281 Ribosomal protein L9, N-terminal domain CR44_RS04905 PF00227 Proteasome subunit CR44_RS04910 PF10431 C-terminal, D2-small domain, of ClpB protein CR44_RS04910 PF07724 AAA domain (Cdc48 subfamily) CR44_RS04915 PF07650 KH domain CR44_RS04915 PF01926 50S ribosome-binding GTPase CR44_RS04935 PF00263 Bacterial type II and III secretion system protein CR44_RS04935 PF03958 Bacterial type II/III secretion system short domain CR44_RS04950 PF00437 Type II/IV secretion system protein CR44_RS04955 PF00482 Type II secretion system (T2SS), protein F CR44_RS04960 PF08447 PAS fold CR44_RS04960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS04965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS04965 PF13426 PAS domain CR44_RS04965 PF08447 PAS fold CR44_RS04975 PF02541 Ppx/GppA phosphatase family CR44_RS04980 PF01966 HD domain CR44_RS04980 PF01743 Poly A polymerase head domain CR44_RS04980 PF12627 Probable RNA and SrmB- binding site of polymerase A CR44_RS04995 PF00180 Isocitrate/isopropylmalate dehydrogenase CR44_RS05000 PF00694 Aconitase C-terminal domain CR44_RS05020 PF17763 Glutaminase/Asparaginase C-terminal domain CR44_RS05020 PF00710 Asparaginase, N-terminal CR44_RS05025 PF02646 RmuC family CR44_RS05035 PF08274 PhnA Zinc-Ribbon CR44_RS05035 PF03831 PhnA domain CR44_RS05040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CR44_RS05040 PF01411 tRNA synthetases class II (A) CR44_RS05040 PF02272 DHHA1 domain CR44_RS05050 PF02545 Maf-like protein CR44_RS05055 PF00905 Penicillin binding protein transpeptidase domain CR44_RS05055 PF00912 Transglycosylase CR44_RS05055 PF17092 Penicillin-binding protein OB-like domain CR44_RS05065 PF01245 Ribosomal protein L19 CR44_RS05070 PF01746 tRNA (Guanine-1)-methyltransferase CR44_RS05075 PF01782 RimM N-terminal domain CR44_RS05075 PF05239 PRC-barrel domain CR44_RS05085 PF00886 Ribosomal protein S16 CR44_RS05090 PF02881 SRP54-type protein, helical bundle domain CR44_RS05090 PF02978 Signal peptide binding domain CR44_RS05090 PF00448 SRP54-type protein, GTPase domain CR44_RS05095 PF13545 Crp-like helix-turn-helix domain CR44_RS05095 PF00027 Cyclic nucleotide-binding domain CR44_RS05105 PF00672 HAMP domain CR44_RS05105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS05110 PF00849 RNA pseudouridylate synthase CR44_RS05115 PF02390 Putative methyltransferase CR44_RS05115 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CR44_RS05125 PF01784 NIF3 (NGG1p interacting factor 3) CR44_RS05130 PF02091 Glycyl-tRNA synthetase alpha subunit CR44_RS05140 PF00731 AIR carboxylase CR44_RS05145 PF01136 Peptidase family U32 CR44_RS05160 PF02811 PHP domain CR44_RS05165 PF00120 Glutamine synthetase, catalytic domain CR44_RS05165 PF03951 Glutamine synthetase, beta-Grasp domain CR44_RS05190 PF12796 Ankyrin repeats (3 copies) CR44_RS05190 PF00023 Ankyrin repeat CR44_RS05195 PF06628 Catalase-related immune-responsive CR44_RS05195 PF00199 Catalase CR44_RS05205 PF05362 Lon protease (S16) C-terminal proteolytic domain CR44_RS05205 PF00004 ATPase family associated with various cellular activities (AAA) CR44_RS05205 PF02190 ATP-dependent protease La (LON) substrate-binding domain CR44_RS05210 PF13525 Outer membrane lipoprotein CR44_RS05215 PF01614 Bacterial transcriptional regulator CR44_RS05215 PF09339 IclR helix-turn-helix domain CR44_RS05220 PF00701 Dihydrodipicolinate synthetase family CR44_RS05225 PF08666 SAF domain CR44_RS05225 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CR44_RS05235 PF07690 Major Facilitator Superfamily CR44_RS05245 PF02623 FliW protein CR44_RS05265 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CR44_RS05265 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CR44_RS05270 PF07687 Peptidase dimerisation domain CR44_RS05270 PF01546 Peptidase family M20/M25/M40 CR44_RS05280 PF08003 Protein of unknown function (DUF1698) CR44_RS05285 PF01008 Initiation factor 2 subunit family CR44_RS05285 PF03061 Thioesterase superfamily CR44_RS05290 PF00753 Metallo-beta-lactamase superfamily CR44_RS05295 PF02540 NAD synthase CR44_RS05300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CR44_RS05305 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CR44_RS05310 PF00696 Amino acid kinase family CR44_RS05315 PF00291 Pyridoxal-phosphate dependent enzyme CR44_RS05320 PF02348 Cytidylyltransferase CR44_RS05330 PF00990 Diguanylate cyclase, GGDEF domain CR44_RS05335 PF00990 Diguanylate cyclase, GGDEF domain CR44_RS05340 PF11412 Disulphide bond corrector protein DsbC CR44_RS05340 PF00085 Thioredoxin CR44_RS05340 PF02683 Cytochrome C biogenesis protein transmembrane region CR44_RS05345 PF03976 Polyphosphate kinase 2 (PPK2) CR44_RS05350 PF00012 Hsp70 protein CR44_RS05355 PF01025 GrpE CR44_RS05385 PF00771 FHIPEP family CR44_RS05390 PF02082 Transcriptional regulator CR44_RS05395 PF00312 Ribosomal protein S15 CR44_RS05400 PF00425 chorismate binding enzyme CR44_RS05405 PF01063 Amino-transferase class IV CR44_RS05415 PF00005 ABC transporter CR44_RS05415 PF08402 TOBE domain CR44_RS05440 PF13847 Methyltransferase domain CR44_RS05445 PF06574 FAD synthetase CR44_RS05445 PF01687 Riboflavin kinase CR44_RS05455 PF12826 Helix-hairpin-helix motif CR44_RS05455 PF00533 BRCA1 C Terminus (BRCT) domain CR44_RS05455 PF03120 NAD-dependent DNA ligase OB-fold domain CR44_RS05455 PF01653 NAD-dependent DNA ligase adenylation domain CR44_RS05460 PF00809 Pterin binding enzyme CR44_RS05465 PF09115 DNA polymerase III, delta subunit, C terminal CR44_RS05475 PF13840 ACT domain CR44_RS05475 PF00696 Amino acid kinase family CR44_RS05475 PF01842 ACT domain CR44_RS05480 PF00293 NUDIX domain CR44_RS05485 PF04055 Radical SAM superfamily CR44_RS05485 PF06969 HemN C-terminal domain CR44_RS05490 PF02416 mttA/Hcf106 family CR44_RS05495 PF00902 Sec-independent protein translocase protein (TatC) CR44_RS05500 PF02547 Queuosine biosynthesis protein CR44_RS05510 PF01189 16S rRNA methyltransferase RsmB/F CR44_RS05510 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CR44_RS05510 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CR44_RS05515 PF03652 Holliday junction resolvase CR44_RS05520 PF02481 DNA recombination-mediator protein A CR44_RS05520 PF18255 DNA processing protein A sterile alpha motif domain CR44_RS05530 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CR44_RS05530 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CR44_RS05540 PF00773 RNB domain CR44_RS05550 PF01250 Ribosomal protein S6 CR44_RS05555 PF00436 Single-strand binding protein family CR44_RS05560 PF01084 Ribosomal protein S18 CR44_RS05565 PF00684 DnaJ central domain CR44_RS05565 PF01556 DnaJ C terminal domain CR44_RS05565 PF00226 DnaJ domain CR44_RS05570 PF00072 Response regulator receiver domain CR44_RS05570 PF00486 Transcriptional regulatory protein, C terminal CR44_RS05580 PF02132 RecR protein CR44_RS05580 PF13662 Toprim domain CR44_RS05590 PF08501 Shikimate dehydrogenase substrate binding domain CR44_RS05605 PF00464 Serine hydroxymethyltransferase CR44_RS05610 PF00152 tRNA synthetases class II (D, K and N) CR44_RS05610 PF01336 OB-fold nucleic acid binding domain CR44_RS05615 PF01475 Ferric uptake regulator family CR44_RS05625 PF00437 Type II/IV secretion system protein CR44_RS05630 PF02686 Glu-tRNAGln amidotransferase C subunit CR44_RS05640 PF15437 Plasminogen-binding protein pgbA C-terminal CR44_RS05650 PF03309 Type III pantothenate kinase CR44_RS05655 PF01634 ATP phosphoribosyltransferase CR44_RS05660 PF05525 Branched-chain amino acid transport protein CR44_RS05665 PF00149 Calcineurin-like phosphoesterase CR44_RS05670 PF02666 Phosphatidylserine decarboxylase CR44_RS05690 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CR44_RS05695 PF12837 4Fe-4S binding domain CR44_RS05695 PF12801 4Fe-4S binding domain CR44_RS05700 PF12800 4Fe-4S binding domain CR44_RS05700 PF12838 4Fe-4S dicluster domain CR44_RS05705 PF01568 Molydopterin dinucleotide binding domain CR44_RS05705 PF00384 Molybdopterin oxidoreductase CR44_RS05705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CR44_RS05710 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS05715 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS05720 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR44_RS05725 PF00005 ABC transporter CR44_RS05730 PF06071 Protein of unknown function (DUF933) CR44_RS05730 PF01926 50S ribosome-binding GTPase CR44_RS05735 PF00883 Cytosol aminopeptidase family, catalytic domain CR44_RS05745 PF00156 Phosphoribosyl transferase domain CR44_RS05755 PF02502 Ribose/Galactose Isomerase CR44_RS05760 PF02163 Peptidase family M50 CR44_RS05765 PF10502 Signal peptidase, peptidase S26 CR44_RS05770 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CR44_RS05770 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CR44_RS05780 PF00202 Aminotransferase class-III CR44_RS05810 PF01312 FlhB HrpN YscU SpaS Family CR44_RS05815 PF03717 Penicillin-binding Protein dimerisation domain CR44_RS05815 PF00905 Penicillin binding protein transpeptidase domain CR44_RS05830 PF01926 50S ribosome-binding GTPase CR44_RS05850 PF00475 Imidazoleglycerol-phosphate dehydratase CR44_RS05855 PF03330 Lytic transglycolase CR44_RS05855 PF05036 Sporulation related domain CR44_RS05860 PF01476 LysM domain CR44_RS05860 PF00877 NlpC/P60 family CR44_RS05865 PF01026 TatD related DNase CR44_RS05870 PF08448 PAS fold CR44_RS05870 PF00990 Diguanylate cyclase, GGDEF domain CR44_RS05875 PF13476 AAA domain CR44_RS05880 PF01513 ATP-NAD kinase CR44_RS05885 PF01336 OB-fold nucleic acid binding domain CR44_RS05885 PF00152 tRNA synthetases class II (D, K and N) CR44_RS05885 PF02938 GAD domain CR44_RS05895 PF00719 Inorganic pyrophosphatase CR44_RS05900 PF13302 Acetyltransferase (GNAT) domain CR44_RS05900 PF13673 Acetyltransferase (GNAT) domain CR44_RS05900 PF03352 Methyladenine glycosylase CR44_RS05900 PF00117 Glutamine amidotransferase class-I CR44_RS05900 PF00958 GMP synthase C terminal domain CR44_RS05910 PF01266 FAD dependent oxidoreductase CR44_RS05910 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CR44_RS05915 PF01520 N-acetylmuramoyl-L-alanine amidase CR44_RS05925 PF00579 tRNA synthetases class I (W and Y) CR44_RS05930 PF02824 TGS domain CR44_RS05930 PF04607 Region found in RelA / SpoT proteins CR44_RS05930 PF13291 ACT domain CR44_RS05935 PF01192 RNA polymerase Rpb6 CR44_RS05940 PF00696 Amino acid kinase family CR44_RS05955 PF00005 ABC transporter CR44_RS05955 PF09383 NIL domain CR44_RS05960 PF02390 Putative methyltransferase CR44_RS05970 PF00849 RNA pseudouridylate synthase CR44_RS05970 PF01479 S4 domain CR44_RS05975 PF01098 Cell cycle protein CR44_RS05980 PF02630 SCO1/SenC CR44_RS05985 PF00672 HAMP domain CR44_RS05985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS05985 PF13426 PAS domain CR44_RS05995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS05995 PF08447 PAS fold CR44_RS05995 PF13426 PAS domain CR44_RS06005 PF00474 Sodium:solute symporter family CR44_RS06010 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS06015 PF00005 ABC transporter CR44_RS06020 PF00497 Bacterial extracellular solute-binding proteins, family 3 CR44_RS06025 PF02581 Thiamine monophosphate synthase CR44_RS06030 PF02673 Bacitracin resistance protein BacA CR44_RS06045 PF00512 His Kinase A (phospho-acceptor) domain CR44_RS06045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS06050 PF07733 Bacterial DNA polymerase III alpha NTPase domain CR44_RS06050 PF14579 Helix-hairpin-helix motif CR44_RS06050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CR44_RS06050 PF02811 PHP domain CR44_RS06055 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CR44_RS06060 PF01619 Proline dehydrogenase CR44_RS06060 PF00171 Aldehyde dehydrogenase family CR44_RS06060 PF14850 DNA-binding domain of Proline dehydrogenase CR44_RS06060 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CR44_RS06065 PF00474 Sodium:solute symporter family CR44_RS06070 PF03264 NapC/NirT cytochrome c family, N-terminal region CR44_RS06075 PF02335 Cytochrome c552 CR44_RS06080 PF01965 DJ-1/PfpI family CR44_RS06090 PF08207 Elongation factor P (EF-P) KOW-like domain CR44_RS06090 PF01132 Elongation factor P (EF-P) OB domain CR44_RS06090 PF09285 Elongation factor P, C-terminal CR44_RS06095 PF01842 ACT domain CR44_RS06095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CR44_RS06095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CR44_RS06105 PF00575 S1 RNA binding domain CR44_RS06110 PF02401 LytB protein CR44_RS06115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CR44_RS06120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CR44_RS06120 PF03147 Ferredoxin-fold anticodon binding domain CR44_RS06120 PF03484 tRNA synthetase B5 domain CR44_RS06120 PF03483 B3/4 domain CR44_RS06120 PF01588 Putative tRNA binding domain CR44_RS06125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CR44_RS06125 PF01409 tRNA synthetases class II core domain (F) CR44_RS06130 PF01230 HIT domain CR44_RS06140 PF00013 KH domain CR44_RS06140 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CR44_RS06140 PF03725 3' exoribonuclease family, domain 2 CR44_RS06140 PF00575 S1 RNA binding domain CR44_RS06140 PF01138 3' exoribonuclease family, domain 1 CR44_RS06160 PF02843 Phosphoribosylglycinamide synthetase, C domain CR44_RS06160 PF02844 Phosphoribosylglycinamide synthetase, N domain CR44_RS06160 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CR44_RS06175 PF00117 Glutamine amidotransferase class-I CR44_RS06175 PF00958 GMP synthase C terminal domain CR44_RS06175 PF02540 NAD synthase CR44_RS06185 PF08459 UvrC Helix-hairpin-helix N-terminal CR44_RS06185 PF02151 UvrB/uvrC motif CR44_RS06185 PF01541 GIY-YIG catalytic domain CR44_RS06195 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CR44_RS06195 PF00672 HAMP domain CR44_RS06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CR44_RS06195 PF00512 His Kinase A (phospho-acceptor) domain CR44_RS06195 PF00072 Response regulator receiver domain CR44_RS06195 PF01627 Hpt domain CR44_RS06200 PF01339 CheB methylesterase CR44_RS06200 PF00072 Response regulator receiver domain CR44_RS06205 PF01243 Pyridoxamine 5'-phosphate oxidase CR44_RS06240 PF00474 Sodium:solute symporter family CR44_RS06245 PF03061 Thioesterase superfamily CR44_RS06250 PF01641 SelR domain CR44_RS06250 PF01625 Peptide methionine sulfoxide reductase CR44_RS06260 PF00137 ATP synthase subunit C CR44_RS06270 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CR44_RS06280 PF06719 AraC-type transcriptional regulator N-terminus CR44_RS06280 PF12833 Helix-turn-helix domain CR44_RS06285 PF00465 Iron-containing alcohol dehydrogenase CR44_RS06290 PF12833 Helix-turn-helix domain CR44_RS06305 PF00209 Sodium:neurotransmitter symporter family CR44_RS06310 PF02436 Conserved carboxylase domain CR44_RS06310 PF00682 HMGL-like CR44_RS06310 PF00364 Biotin-requiring enzyme CR44_RS06315 PF01293 Phosphoenolpyruvate carboxykinase CR44_RS06320 PF00206 Lyase CR44_RS06320 PF14698 Argininosuccinate lyase C-terminal CR44_RS06330 PF07664 Ferrous iron transport protein B C terminus CR44_RS06330 PF07670 Nucleoside recognition CR44_RS06330 PF02421 Ferrous iron transport protein B CR44_RS06340 PF07732 Multicopper oxidase CR44_RS06340 PF07731 Multicopper oxidase CR44_RS06360 PF00679 Elongation factor G C-terminus CR44_RS06360 PF14492 Elongation Factor G, domain II CR44_RS06360 PF03764 Elongation factor G, domain IV CR44_RS06360 PF00009 Elongation factor Tu GTP binding domain CR44_RS06360 PF03144 Elongation factor Tu domain 2 CR44_RS06365 PF00177 Ribosomal protein S7p/S5e CR44_RS06370 PF00164 Ribosomal protein S12/S23 CR44_RS06375 PF00623 RNA polymerase Rpb1, domain 2 CR44_RS06375 PF04998 RNA polymerase Rpb1, domain 5 CR44_RS06375 PF05000 RNA polymerase Rpb1, domain 4 CR44_RS06375 PF04997 RNA polymerase Rpb1, domain 1 CR44_RS06375 PF04983 RNA polymerase Rpb1, domain 3 CR44_RS06380 PF04563 RNA polymerase beta subunit CR44_RS06380 PF10385 RNA polymerase beta subunit external 1 domain CR44_RS06380 PF04560 RNA polymerase Rpb2, domain 7 CR44_RS06380 PF04565 RNA polymerase Rpb2, domain 3 CR44_RS06380 PF00562 RNA polymerase Rpb2, domain 6 CR44_RS06380 PF04561 RNA polymerase Rpb2, domain 2 CR44_RS06385 PF16320 Ribosomal protein L7/L12 dimerisation domain CR44_RS06385 PF00542 Ribosomal protein L7/L12 C-terminal domain CR44_RS06390 PF00466 Ribosomal protein L10 CR44_RS06395 PF00687 Ribosomal protein L1p/L10e family CR44_RS06400 PF03946 Ribosomal protein L11, N-terminal domain CR44_RS06400 PF00298 Ribosomal protein L11, RNA binding domain CR44_RS06405 PF02357 Transcription termination factor nusG CR44_RS06420 PF00471 Ribosomal protein L33 CR44_RS06425 PF03143 Elongation factor Tu C-terminal domain CR44_RS06425 PF03144 Elongation factor Tu domain 2 CR44_RS06425 PF00009 Elongation factor Tu GTP binding domain CR44_RS06450 PF00080 Copper/zinc superoxide dismutase (SODC) CR44_RS06460 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CR44_RS06465 PF01029 NusB family CR44_RS06470 PF00885 6,7-dimethyl-8-ribityllumazine synthase CR44_RS06475 PF00893 Small Multidrug Resistance protein CR44_RS06485 PF00793 DAHP synthetase I family CR44_RS06490 PF00892 EamA-like transporter family CR44_RS06495 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CR44_RS06495 PF01926 50S ribosome-binding GTPase CR44_RS06500 PF01202 Shikimate kinase CR44_RS06505 PF00579 tRNA synthetases class I (W and Y) CR44_RS06510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CR44_RS06510 PF02403 Seryl-tRNA synthetase N-terminal domain CR44_RS06520 PF00682 HMGL-like CR44_RS06520 PF08502 LeuA allosteric (dimerisation) domain CR44_RS06525 PF01066 CDP-alcohol phosphatidyltransferase CR44_RS06530 PF02666 Phosphatidylserine decarboxylase CR44_RS06535 PF01434 Peptidase family M41 CR44_RS06535 PF17862 AAA+ lid domain CR44_RS06535 PF00004 ATPase family associated with various cellular activities (AAA) CR44_RS06545 PF00072 Response regulator receiver domain CR44_RS06550 PF00977 Histidine biosynthesis protein CR44_RS06555 PF00117 Glutamine amidotransferase class-I CR44_RS06565 PF02719 Polysaccharide biosynthesis protein CR44_RS06570 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CR44_RS06575 PF02525 Flavodoxin-like fold CR44_RS06585 PF08245 Mur ligase middle domain CR44_RS06590 PF00953 Glycosyl transferase family 4 CR44_RS06590 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CR44_RS06595 PF01676 Metalloenzyme superfamily CR44_RS06595 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CR44_RS06605 PF00550 Phosphopantetheine attachment site CR44_RS06610 PF00109 Beta-ketoacyl synthase, N-terminal domain CR44_RS06610 PF02801 Beta-ketoacyl synthase, C-terminal domain CR44_RS06615 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CR44_RS06625 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR44_RS06625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CR44_RS06635 PF03462 PCRF domain CR44_RS06635 PF00472 RF-1 domain CR44_RS06640 PF02569 Pantoate-beta-alanine ligase CR44_RS06645 PF00919 Uncharacterized protein family UPF0004 CR44_RS06645 PF18693 TRAM domain CR44_RS06645 PF04055 Radical SAM superfamily CR44_RS06650 PF01171 PP-loop family CR44_RS06675 PF00919 Uncharacterized protein family UPF0004 CR44_RS06675 PF01938 TRAM domain CR44_RS06675 PF04055 Radical SAM superfamily CR44_RS06685 PF13184 NusA-like KH domain CR44_RS06685 PF08529 NusA N-terminal domain CR44_RS06695 PF02397 Bacterial sugar transferase CR44_RS06700 PF00534 Glycosyl transferases group 1 CR44_RS06700 PF13477 Glycosyl transferase 4-like CR44_RS06705 PF18527 STT3/PglB C-terminal beta-barrel domain CR44_RS06705 PF02516 Oligosaccharyl transferase STT3 subunit CR44_RS06710 PF13439 Glycosyltransferase Family 4 CR44_RS06710 PF00534 Glycosyl transferases group 1 CR44_RS06715 PF13439 Glycosyltransferase Family 4 CR44_RS06715 PF00534 Glycosyl transferases group 1 CR44_RS06720 PF00534 Glycosyl transferases group 1 CR44_RS06720 PF13439 Glycosyltransferase Family 4 CR44_RS06725 PF14667 Polysaccharide biosynthesis C-terminal domain CR44_RS06725 PF01943 Polysaccharide biosynthesis protein CR44_RS06730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CR44_RS06730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CR44_RS06730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CR44_RS06735 PF00535 Glycosyl transferase family 2 CR44_RS06745 PF04138 GtrA-like protein CR44_RS06750 PF01370 NAD dependent epimerase/dehydratase family CR44_RS06765 PF14743 DNA ligase OB-like domain CR44_RS06765 PF01068 ATP dependent DNA ligase domain CR44_RS06770 PF01370 NAD dependent epimerase/dehydratase family CR44_RS06775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CR44_RS06775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CR44_RS06775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CR44_RS06795 PF00535 Glycosyl transferase family 2 CR44_RS06800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CR44_RS06805 PF01522 Polysaccharide deacetylase CR44_RS06820 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CR44_RS06825 PF00534 Glycosyl transferases group 1 CR44_RS06825 PF13439 Glycosyltransferase Family 4 CR44_RS06845 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CR44_RS06850 PF13580 SIS domain CR44_RS06855 PF01467 Cytidylyltransferase-like CR44_RS06855 PF00294 pfkB family carbohydrate kinase CR44_RS06860 PF01370 NAD dependent epimerase/dehydratase family CR44_RS06865 PF08645 Polynucleotide kinase 3 phosphatase CR44_RS06875 PF03797 Autotransporter beta-domain CR44_RS06875 PF00082 Subtilase family CR44_RS06875 PF12951 Passenger-associated-transport-repeat CR44_RS06890 PF00403 Heavy-metal-associated domain CR44_RS06900 PF07497 Rho termination factor, RNA-binding domain CR44_RS06900 PF07498 Rho termination factor, N-terminal domain CR44_RS06900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CR44_RS06905 PF12170 DNA polymerase III tau subunit V interacting with alpha CR44_RS06905 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CR44_RS06905 PF12169 DNA polymerase III subunits gamma and tau domain III CR44_RS06930 PF00121 Triosephosphate isomerase CR44_RS06935 PF00162 Phosphoglycerate kinase CR44_RS06940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CR44_RS06940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CR44_RS06945 PF01467 Cytidylyltransferase-like CR44_RS06955 PF03601 Conserved hypothetical protein 698 CR44_RS06960 PF03466 LysR substrate binding domain CR44_RS06960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CR44_RS06965 PF05746 DALR anticodon binding domain CR44_RS06965 PF00750 tRNA synthetases class I (R) CR44_RS06965 PF03485 Arginyl tRNA synthetase N terminal domain CR44_RS06970 PF02416 mttA/Hcf106 family CR44_RS06975 PF00625 Guanylate kinase CR44_RS06985 PF01311 Bacterial export proteins, family 1 CR44_RS06990 PF00593 TonB dependent receptor CR44_RS06990 PF07715 TonB-dependent Receptor Plug Domain CR44_RS06995 PF00005 ABC transporter CR44_RS07000 PF00889 Elongation factor TS CR44_RS07005 PF00318 Ribosomal protein S2 CR44_RS07015 PF02578 Multi-copper polyphenol oxidoreductase laccase CR44_RS07020 PF00677 Lumazine binding domain CR44_RS07025 PF01134 Glucose inhibited division protein A CR44_RS07025 PF13932 GidA associated domain CR44_RS07030 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CR44_RS07030 PF00355 Rieske [2Fe-2S] domain CR44_RS07035 PF00032 Cytochrome b(C-terminal)/b6/petD CR44_RS07035 PF00033 Cytochrome b/b6/petB CR44_RS07065 PF04055 Radical SAM superfamily CR44_RS07070 PF01208 Uroporphyrinogen decarboxylase (URO-D) CR44_RS07080 PF02774 Semialdehyde dehydrogenase, dimerisation domain CR44_RS07080 PF01118 Semialdehyde dehydrogenase, NAD binding domain CR44_RS07085 PF00072 Response regulator receiver domain CR44_RS07085 PF00158 Sigma-54 interaction domain CR44_RS07100 PF00521 DNA gyrase/topoisomerase IV, subunit A CR44_RS07100 PF03989 DNA gyrase C-terminal domain, beta-propeller CR44_RS07120 PF00501 AMP-binding enzyme CR44_RS07120 PF13193 AMP-binding enzyme C-terminal domain CR44_RS07145 PF01361 Tautomerase enzyme CR44_RS07150 PF03144 Elongation factor Tu domain 2 CR44_RS07150 PF00679 Elongation factor G C-terminus CR44_RS07150 PF00009 Elongation factor Tu GTP binding domain CR44_RS07150 PF06421 GTP-binding protein LepA C-terminus CR44_RS07155 PF14572 Phosphoribosyl synthetase-associated domain CR44_RS07155 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CR44_RS07160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CR44_RS07160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CR44_RS07165 PF01979 Amidohydrolase family CR44_RS07205 PF03641 Possible lysine decarboxylase CR44_RS07210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CR44_RS07210 PF07992 Pyridine nucleotide-disulphide oxidoreductase CR44_RS07215 PF01645 Conserved region in glutamate synthase CR44_RS07215 PF04898 Glutamate synthase central domain CR44_RS07215 PF00310 Glutamine amidotransferases class-II CR44_RS07215 PF01493 GXGXG motif CR44_RS07220 PF01872 RibD C-terminal domain CR44_RS07220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CR44_RS07235 PF02576 RimP N-terminal domain CR44_RS07235 PF17384 RimP C-terminal SH3 domain CR44_RS07240 PF02033 Ribosome-binding factor A CR44_RS07245 PF04760 Translation initiation factor IF-2, N-terminal region CR44_RS07245 PF00009 Elongation factor Tu GTP binding domain CR44_RS07245 PF11987 Translation-initiation factor 2 CR44_RS07255 PF00288 GHMP kinases N terminal domain CR44_RS07265 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CR44_RS07270 PF02567 Phenazine biosynthesis-like protein CR44_RS07280 PF01842 ACT domain CR44_RS07280 PF02153 Prephenate dehydrogenase CR44_RS07285 PF07244 Surface antigen variable number repeat CR44_RS07285 PF01103 Surface antigen CR44_RS07290 PF01343 Peptidase family S49 CR44_RS07295 PF01979 Amidohydrolase family CR44_RS07300 PF01220 Dehydroquinase class II CR44_RS07305 PF00557 Metallopeptidase family M24 CR44_RS07305 PF01321 Creatinase/Prolidase N-terminal domain CR44_RS07310 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CR44_RS07315 PF00448 SRP54-type protein, GTPase domain CR44_RS07320 PF10609 NUBPL iron-transfer P-loop NTPase CR44_RS07330 PF04545 Sigma-70, region 4 CR44_RS07330 PF04542 Sigma-70 region 2 CR44_RS07330 PF04539 Sigma-70 region 3 CR44_RS07335 PF02154 Flagellar motor switch protein FliM CR44_RS07335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CR44_RS07340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CR44_RS07340 PF04509 CheC-like family CR44_RS07345 PF01171 PP-loop family CR44_RS07350 PF01048 Phosphorylase superfamily CR44_RS07355 PF00698 Acyl transferase domain CR44_RS07360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CR44_RS07375 PF04052 TolB amino-terminal domain CR44_RS07385 PF02472 Biopolymer transport protein ExbD/TolR CR44_RS07390 PF01618 MotA/TolQ/ExbB proton channel family CR44_RS07395 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CR44_RS07400 PF02874 ATP synthase alpha/beta family, beta-barrel domain CR44_RS07400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CR44_RS07405 PF00231 ATP synthase CR44_RS07410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CR44_RS07410 PF02874 ATP synthase alpha/beta family, beta-barrel domain CR44_RS07410 PF00306 ATP synthase alpha/beta chain, C terminal domain CR44_RS07415 PF00213 ATP synthase delta (OSCP) subunit CR44_RS07420 PF00430 ATP synthase B/B' CF(0) CR44_RS07425 PF00430 ATP synthase B/B' CF(0) CR44_RS07430 PF17762 HTH domain found in ParB protein CR44_RS07430 PF02195 ParB-like nuclease domain CR44_RS07435 PF13614 AAA domain CR44_RS07440 PF03099 Biotin/lipoate A/B protein ligase family CR44_RS07440 PF02237 Biotin protein ligase C terminal domain CR44_RS07440 PF08279 HTH domain CR44_RS07445 PF02911 Formyl transferase, C-terminal domain CR44_RS07445 PF00551 Formyl transferase CR44_RS07450 PF00696 Amino acid kinase family CR44_RS07455 PF01018 GTP1/OBG CR44_RS07455 PF01926 50S ribosome-binding GTPase CR44_RS07460 PF01016 Ribosomal L27 protein CR44_RS07465 PF00829 Ribosomal prokaryotic L21 protein CR44_RS07470 PF00034 Cytochrome c CR44_RS07470 PF03150 Di-haem cytochrome c peroxidase CR44_RS07475 PF13247 4Fe-4S dicluster domain CR44_RS07480 PF00384 Molybdopterin oxidoreductase CR44_RS07480 PF01568 Molydopterin dinucleotide binding domain CR44_RS07480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CR44_RS07485 PF01568 Molydopterin dinucleotide binding domain CR44_RS07485 PF00384 Molybdopterin oxidoreductase CR44_RS07485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CR44_RS07505 PF03841 L-seryl-tRNA selenium transferase CR44_RS07510 PF03144 Elongation factor Tu domain 2 CR44_RS07510 PF09106 Elongation factor SelB, winged helix CR44_RS07510 PF09107 Elongation factor SelB, winged helix CR44_RS07510 PF00009 Elongation factor Tu GTP binding domain CR44_RS07520 PF02348 Cytidylyltransferase CR44_RS07550 PF08666 SAF domain CR44_RS07550 PF03102 NeuB family CR44_RS07555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CR44_RS07555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CR44_RS07560 PF02621 Menaquinone biosynthesis CR44_RS07570 PF01515 Phosphate acetyl/butaryl transferase CR44_RS07570 PF03949 Malic enzyme, NAD binding domain CR44_RS07570 PF00390 Malic enzyme, N-terminal domain CR44_RS07580 PF00749 tRNA synthetases class I (E and Q), catalytic domain CR44_RS07590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CR44_RS07590 PF00289 Biotin carboxylase, N-terminal domain CR44_RS07590 PF02785 Biotin carboxylase C-terminal domain CR44_RS07595 PF00364 Biotin-requiring enzyme CR44_RS07600 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS07610 PF00692 dUTPase CR44_RS07615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CR44_RS07625 PF03807 NADP oxidoreductase coenzyme F420-dependent CR44_RS07625 PF14748 Pyrroline-5-carboxylate reductase dimerisation CR44_RS07635 PF04055 Radical SAM superfamily CR44_RS07635 PF06969 HemN C-terminal domain CR44_RS07640 PF10788 Protein of unknown function (DUF2603) CR44_RS07645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CR44_RS07645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CR44_RS07650 PF00490 Delta-aminolevulinic acid dehydratase CR44_RS07655 PF00925 GTP cyclohydrolase II CR44_RS07660 PF02527 rRNA small subunit methyltransferase G CR44_RS07675 PF01435 Peptidase family M48 CR44_RS07680 PF01168 Alanine racemase, N-terminal domain CR44_RS07680 PF00842 Alanine racemase, C-terminal domain CR44_RS07720 PF00456 Transketolase, thiamine diphosphate binding domain CR44_RS07760 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CR44_RS07765 PF02911 Formyl transferase, C-terminal domain CR44_RS07765 PF00551 Formyl transferase CR44_RS07770 PF12464 Maltose acetyltransferase CR44_RS07770 PF00132 Bacterial transferase hexapeptide (six repeats) CR44_RS07775 PF06463 Molybdenum Cofactor Synthesis C CR44_RS07775 PF04055 Radical SAM superfamily CR44_RS07785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CR44_RS07800 PF00733 Asparagine synthase CR44_RS07800 PF13537 Glutamine amidotransferase domain CR44_RS07805 PF00534 Glycosyl transferases group 1 CR44_RS07805 PF13439 Glycosyltransferase Family 4 CR44_RS07830 PF00534 Glycosyl transferases group 1 CR44_RS07835 PF13537 Glutamine amidotransferase domain CR44_RS07835 PF00733 Asparagine synthase CR44_RS07905 PF00391 PEP-utilising enzyme, mobile domain CR44_RS07905 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CR44_RS07910 PF02540 NAD synthase CR44_RS07910 PF00958 GMP synthase C terminal domain CR44_RS07910 PF00117 Glutamine amidotransferase class-I CR44_RS07915 PF00483 Nucleotidyl transferase CR44_RS07920 PF02719 Polysaccharide biosynthesis protein CR44_RS07925 PF13302 Acetyltransferase (GNAT) domain CR44_RS07930 PF00700 Bacterial flagellin C-terminal helical region CR44_RS07930 PF07196 Flagellin hook IN motif CR44_RS07930 PF00669 Bacterial flagellin N-terminal helical region CR44_RS07935 PF00700 Bacterial flagellin C-terminal helical region CR44_RS07935 PF07196 Flagellin hook IN motif CR44_RS07935 PF00669 Bacterial flagellin N-terminal helical region CR44_RS07940 PF13847 Methyltransferase domain CR44_RS07940 PF10119 Predicted methyltransferase regulatory domain CR44_RS07955 PF01594 AI-2E family transporter CR44_RS07960 PF02386 Cation transport protein CR44_RS07965 PF02080 TrkA-C domain CR44_RS07965 PF02254 TrkA-N domain CR44_RS07970 PF10415 Fumarase C C-terminus CR44_RS07970 PF00206 Lyase CR44_RS07975 PF03605 Anaerobic c4-dicarboxylate membrane transporter CR44_RS07980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS07980 PF08447 PAS fold CR44_RS07980 PF13426 PAS domain CR44_RS07990 PF00593 TonB dependent receptor CR44_RS07990 PF07715 TonB-dependent Receptor Plug Domain CR44_RS07995 PF01618 MotA/TolQ/ExbB proton channel family CR44_RS08000 PF02472 Biopolymer transport protein ExbD/TolR CR44_RS08005 PF03544 Gram-negative bacterial TonB protein C-terminal CR44_RS08010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CR44_RS08015 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS08020 PF12911 N-terminal TM domain of oligopeptide transport permease C CR44_RS08020 PF00528 Binding-protein-dependent transport system inner membrane component CR44_RS08025 PF00005 ABC transporter CR44_RS08030 PF00005 ABC transporter CR44_RS08035 PF02040 Arsenical pump membrane protein CR44_RS08055 PF03738 Glutathionylspermidine synthase preATP-grasp CR44_RS08060 PF02441 Flavoprotein CR44_RS08065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CR44_RS08065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CR44_RS08070 PF04461 Protein of unknown function (DUF520) CR44_RS08075 PF01323 DSBA-like thioredoxin domain CR44_RS08080 PF06969 HemN C-terminal domain CR44_RS08080 PF04055 Radical SAM superfamily CR44_RS08085 PF01434 Peptidase family M41 CR44_RS08085 PF17862 AAA+ lid domain CR44_RS08085 PF00004 ATPase family associated with various cellular activities (AAA) CR44_RS08090 PF13193 AMP-binding enzyme C-terminal domain CR44_RS08090 PF00501 AMP-binding enzyme CR44_RS08100 PF01261 Xylose isomerase-like TIM barrel CR44_RS08115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS08115 PF00672 HAMP domain CR44_RS08115 PF16591 Helical bimodular sensor domain CR44_RS08180 PF03741 Integral membrane protein TerC family CR44_RS08185 PF00551 Formyl transferase CR44_RS08190 PF01256 Carbohydrate kinase CR44_RS08190 PF03853 YjeF-related protein N-terminus CR44_RS08195 PF13335 Magnesium chelatase, subunit ChlI C-terminal CR44_RS08195 PF01078 Magnesium chelatase, subunit ChlI CR44_RS08200 PF01327 Polypeptide deformylase CR44_RS08210 PF00574 Clp protease CR44_RS08215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CR44_RS08215 PF05698 Bacterial trigger factor protein (TF) C-terminus CR44_RS08215 PF05697 Bacterial trigger factor protein (TF) CR44_RS08220 PF01227 GTP cyclohydrolase I CR44_RS08225 PF18269 T3SS EscN ATPase C-terminal domain CR44_RS08225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CR44_RS08230 PF00266 Aminotransferase class-V CR44_RS08235 PF01592 NifU-like N terminal domain CR44_RS08235 PF01106 NifU-like domain CR44_RS08235 PF04324 BFD-like [2Fe-2S] binding domain CR44_RS08250 PF05198 Translation initiation factor IF-3, N-terminal domain CR44_RS08250 PF00707 Translation initiation factor IF-3, C-terminal domain CR44_RS08255 PF03129 Anticodon binding domain CR44_RS08255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CR44_RS08255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CR44_RS08280 PF03653 Uncharacterised protein family (UPF0093) CR44_RS08290 PF01252 Signal peptidase (SPase) II CR44_RS08295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CR44_RS08295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CR44_RS08295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CR44_RS08295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CR44_RS08300 PF01649 Ribosomal protein S20 CR44_RS08305 PF00472 RF-1 domain CR44_RS08305 PF03462 PCRF domain CR44_RS08310 PF04237 YjbR CR44_RS08320 PF03372 Endonuclease/Exonuclease/phosphatase family CR44_RS08325 PF00884 Sulfatase CR44_RS08325 PF08019 Phosphoethanolamine transferase EptA/EptB CR44_RS08330 PF01219 Prokaryotic diacylglycerol kinase CR44_RS08340 PF02659 Putative manganese efflux pump CR44_RS08350 PF00950 ABC 3 transport family CR44_RS08355 PF00005 ABC transporter CR44_RS08360 PF03824 High-affinity nickel-transport protein CR44_RS08365 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CR44_RS08375 PF03150 Di-haem cytochrome c peroxidase CR44_RS08375 PF00034 Cytochrome c CR44_RS08380 PF00563 EAL domain CR44_RS08380 PF05231 MASE1 CR44_RS08385 PF00484 Carbonic anhydrase CR44_RS08390 PF00924 Mechanosensitive ion channel CR44_RS08405 PF01264 Chorismate synthase CR44_RS08410 PF14622 Ribonuclease-III-like CR44_RS08410 PF00035 Double-stranded RNA binding motif CR44_RS08415 PF00075 RNase H CR44_RS08425 PF08275 DNA primase catalytic core, N-terminal domain CR44_RS08425 PF01807 CHC2 zinc finger CR44_RS08445 PF03553 Na+/H+ antiporter family CR44_RS08445 PF13726 Na+-H+ antiporter family CR44_RS08455 PF03062 MBOAT, membrane-bound O-acyltransferase family CR44_RS08460 PF00920 Dehydratase family CR44_RS08465 PF00149 Calcineurin-like phosphoesterase CR44_RS08465 PF02872 5'-nucleotidase, C-terminal domain CR44_RS08470 PF06418 CTP synthase N-terminus CR44_RS08470 PF00117 Glutamine amidotransferase class-I CR44_RS08475 PF17768 RecJ OB domain CR44_RS08475 PF02272 DHHA1 domain CR44_RS08475 PF01368 DHH family CR44_RS08480 PF06965 Na+/H+ antiporter 1 CR44_RS08485 PF00005 ABC transporter CR44_RS08490 PF10615 Protein of unknown function (DUF2470) CR44_RS08490 PF01243 Pyridoxamine 5'-phosphate oxidase CR44_RS08495 PF07715 TonB-dependent Receptor Plug Domain CR44_RS08495 PF00593 TonB dependent receptor CR44_RS08500 PF01032 FecCD transport family CR44_RS08505 PF00005 ABC transporter CR44_RS08510 PF01497 Periplasmic binding protein CR44_RS08535 PF07196 Flagellin hook IN motif CR44_RS08535 PF00460 Flagella basal body rod protein CR44_RS08535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CR44_RS08535 PF07559 Flagellar basal body protein FlaE CR44_RS08545 PF01678 Diaminopimelate epimerase CR44_RS08550 PF01121 Dephospho-CoA kinase CR44_RS08555 PF01042 Endoribonuclease L-PSP CR44_RS08560 PF02769 AIR synthase related protein, C-terminal domain CR44_RS08560 PF00586 AIR synthase related protein, N-terminal domain CR44_RS08570 PF16193 AAA C-terminal domain CR44_RS08570 PF01661 Macro domain CR44_RS08570 PF12002 MgsA AAA+ ATPase C terminal CR44_RS08570 PF05496 Holliday junction DNA helicase RuvB P-loop domain CR44_RS08575 PF00892 EamA-like transporter family CR44_RS08580 PF08534 Redoxin CR44_RS08590 PF00156 Phosphoribosyl transferase domain CR44_RS08595 PF01765 Ribosome recycling factor CR44_RS08605 PF03840 Preprotein translocase SecG subunit CR44_RS08610 PF01027 Inhibitor of apoptosis-promoting Bax1 CR44_RS08660 PF00106 short chain dehydrogenase CR44_RS08670 PF13411 MerR HTH family regulatory protein CR44_RS08675 PF02511 Thymidylate synthase complementing protein CR44_RS08680 PF00732 GMC oxidoreductase CR44_RS08680 PF05199 GMC oxidoreductase CR44_RS08690 PF07681 DoxX CR44_RS08695 PF00881 Nitroreductase family CR44_RS08710 PF00849 RNA pseudouridylate synthase CR44_RS08710 PF01479 S4 domain CR44_RS08715 PF00571 CBS domain CR44_RS08715 PF01380 SIS domain CR44_RS08720 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CR44_RS08720 PF00753 Metallo-beta-lactamase superfamily CR44_RS08720 PF17770 Ribonuclease J C-terminal domain CR44_RS08725 PF00398 Ribosomal RNA adenine dimethylase CR44_RS08730 PF05977 Transmembrane secretion effector CR44_RS08735 PF00977 Histidine biosynthesis protein CR44_RS08745 PF04055 Radical SAM superfamily CR44_RS08755 PF00849 RNA pseudouridylate synthase CR44_RS08760 PF10397 Adenylosuccinate lyase C-terminus CR44_RS08760 PF00206 Lyase CR44_RS08765 PF03477 ATP cone domain CR44_RS08765 PF02867 Ribonucleotide reductase, barrel domain CR44_RS08765 PF00317 Ribonucleotide reductase, all-alpha domain CR44_RS08770 PF00324 Amino acid permease CR44_RS08775 PF02075 Crossover junction endodeoxyribonuclease RuvC CR44_RS08785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS08785 PF08447 PAS fold CR44_RS08785 PF13426 PAS domain CR44_RS08810 PF05860 haemagglutination activity domain CR44_RS08810 PF05594 Haemagluttinin repeat CR44_RS08810 PF13018 Extended Signal Peptide of Type V secretion system CR44_RS08810 PF13332 Hemagglutinin repeat CR44_RS08815 PF00270 DEAD/DEAH box helicase CR44_RS08815 PF00271 Helicase conserved C-terminal domain CR44_RS08825 PF12833 Helix-turn-helix domain CR44_RS08830 PF01970 Tripartite tricarboxylate transporter TctA family CR44_RS08835 PF01970 Tripartite tricarboxylate transporter TctA family CR44_RS08845 PF13426 PAS domain CR44_RS08845 PF08447 PAS fold CR44_RS08845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS08850 PF04748 Divergent polysaccharide deacetylase CR44_RS08860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS08860 PF08447 PAS fold CR44_RS08860 PF13426 PAS domain CR44_RS08865 PF08447 PAS fold CR44_RS08865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CR44_RS08865 PF13426 PAS domain CR44_RS08870 PF07963 Prokaryotic N-terminal methylation motif CR44_RS08870 PF00114 Pilin (bacterial filament) CR44_RS08890 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CR44_RS08890 PF00535 Glycosyl transferase family 2 CR44_RS08895 PF08447 PAS fold CR44_RS08895 PF13426 PAS domain CR44_RS08895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain