locus-tag	class	description
CFVI03293_RS00005	PF11638	DnaA N-terminal domain
CFVI03293_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
CFVI03293_RS00005	PF00308	Bacterial dnaA  protein
CFVI03293_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
CFVI03293_RS00010	PF02767	DNA polymerase III beta subunit, central domain
CFVI03293_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
CFVI03293_RS00015	PF01751	Toprim domain
CFVI03293_RS00015	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS00015	PF00986	DNA gyrase B subunit, carboxyl terminus
CFVI03293_RS00015	PF00204	DNA gyrase B
CFVI03293_RS00025	PF14489	QueF-like protein
CFVI03293_RS00040	PF07559	Flagellar basal body protein FlaE
CFVI03293_RS00040	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFVI03293_RS00040	PF00460	Flagella basal body rod protein
CFVI03293_RS00045	PF03963	Flagellar hook capping protein - N-terminal region
CFVI03293_RS00055	PF07690	Major Facilitator Superfamily
CFVI03293_RS00060	PF00009	Elongation factor Tu GTP binding domain
CFVI03293_RS00060	PF00679	Elongation factor G C-terminus
CFVI03293_RS00060	PF03144	Elongation factor Tu domain 2
CFVI03293_RS00075	PF01351	Ribonuclease HII
CFVI03293_RS00080	PF03741	Integral membrane protein TerC family
CFVI03293_RS00085	PF08402	TOBE domain
CFVI03293_RS00085	PF00005	ABC transporter
CFVI03293_RS00095	PF01545	Cation efflux family
CFVI03293_RS00115	PF04055	Radical SAM superfamily
CFVI03293_RS00125	PF03372	Endonuclease/Exonuclease/phosphatase family
CFVI03293_RS00140	PF00268	Ribonucleotide reductase, small chain
CFVI03293_RS00145	PF00795	Carbon-nitrogen hydrolase
CFVI03293_RS00155	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
CFVI03293_RS00155	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
CFVI03293_RS00160	PF00338	Ribosomal protein S10p/S20e
CFVI03293_RS00165	PF00297	Ribosomal protein L3
CFVI03293_RS00170	PF00573	Ribosomal protein L4/L1 family
CFVI03293_RS00175	PF00276	Ribosomal protein L23
CFVI03293_RS00180	PF03947	Ribosomal Proteins L2, C-terminal domain
CFVI03293_RS00180	PF00181	Ribosomal Proteins L2, RNA binding domain
CFVI03293_RS00185	PF00203	Ribosomal protein S19
CFVI03293_RS00190	PF00237	Ribosomal protein L22p/L17e
CFVI03293_RS00195	PF07650	KH domain
CFVI03293_RS00195	PF00189	Ribosomal protein S3, C-terminal domain
CFVI03293_RS00200	PF00252	Ribosomal protein L16p/L10e
CFVI03293_RS00205	PF00831	Ribosomal L29 protein
CFVI03293_RS00210	PF00366	Ribosomal protein S17
CFVI03293_RS00215	PF00238	Ribosomal protein L14p/L23e
CFVI03293_RS00220	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
CFVI03293_RS00220	PF00467	KOW motif
CFVI03293_RS00225	PF00281	Ribosomal protein L5
CFVI03293_RS00225	PF00673	ribosomal L5P family C-terminus
CFVI03293_RS00230	PF00253	Ribosomal protein S14p/S29e
CFVI03293_RS00235	PF00410	Ribosomal protein S8
CFVI03293_RS00240	PF00347	Ribosomal protein L6
CFVI03293_RS00245	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
CFVI03293_RS00250	PF00333	Ribosomal protein S5, N-terminal domain
CFVI03293_RS00250	PF03719	Ribosomal protein S5, C-terminal domain
CFVI03293_RS00255	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
CFVI03293_RS00260	PF00344	SecY translocase
CFVI03293_RS00265	PF00557	Metallopeptidase family M24
CFVI03293_RS00270	PF01176	Translation initiation factor 1A / IF-1
CFVI03293_RS00275	PF00444	Ribosomal protein L36
CFVI03293_RS00280	PF00416	Ribosomal protein S13/S18
CFVI03293_RS00285	PF00411	Ribosomal protein S11
CFVI03293_RS00290	PF01479	S4 domain
CFVI03293_RS00290	PF00163	Ribosomal protein S4/S9 N-terminal domain
CFVI03293_RS00295	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
CFVI03293_RS00295	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
CFVI03293_RS00295	PF01000	RNA polymerase Rpb3/RpoA insert domain
CFVI03293_RS00300	PF01196	Ribosomal protein L17
CFVI03293_RS00315	PF08245	Mur ligase middle domain
CFVI03293_RS00315	PF02875	Mur ligase family, glutamate ligase domain
CFVI03293_RS00320	PF02261	Aspartate decarboxylase
CFVI03293_RS00325	PF12729	Four helix bundle sensory module for signal transduction
CFVI03293_RS00325	PF00672	HAMP domain
CFVI03293_RS00325	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS00330	PF02575	YbaB/EbfC DNA-binding family
CFVI03293_RS00340	PF00348	Polyprenyl synthetase
CFVI03293_RS00345	PF02779	Transketolase, pyrimidine binding domain
CFVI03293_RS00345	PF00456	Transketolase, thiamine diphosphate binding domain
CFVI03293_RS00345	PF02780	Transketolase, C-terminal domain
CFVI03293_RS00350	PF00171	Aldehyde dehydrogenase family
CFVI03293_RS00360	PF02554	Carbon starvation protein CstA
CFVI03293_RS00360	PF13722	5TM C-terminal transporter carbon starvation CstA
CFVI03293_RS00375	PF05690	Thiazole biosynthesis protein ThiG
CFVI03293_RS00380	PF00919	Uncharacterized protein family UPF0004
CFVI03293_RS00380	PF04055	Radical SAM superfamily
CFVI03293_RS00380	PF18693	TRAM domain
CFVI03293_RS00385	PF01205	Uncharacterized protein family UPF0029
CFVI03293_RS00385	PF09186	Domain of unknown function (DUF1949)
CFVI03293_RS00390	PF00483	Nucleotidyl transferase
CFVI03293_RS00395	PF00342	Phosphoglucose isomerase
CFVI03293_RS00400	PF00210	Ferritin-like domain
CFVI03293_RS00405	PF04264	YceI-like domain
CFVI03293_RS00420	PF13649	Methyltransferase domain
CFVI03293_RS00425	PF08241	Methyltransferase domain
CFVI03293_RS00425	PF04301	Protein of unknown function (DUF452)
CFVI03293_RS00430	PF00155	Aminotransferase class I and II
CFVI03293_RS00440	PF00586	AIR synthase related protein, N-terminal domain
CFVI03293_RS00440	PF02769	AIR synthase related protein, C-terminal domain
CFVI03293_RS00445	PF01142	tRNA pseudouridine synthase D (TruD)
CFVI03293_RS00455	PF02561	Flagellar protein FliS
CFVI03293_RS00460	PF02465	Flagellar hook-associated protein 2 N-terminus
CFVI03293_RS00460	PF07196	Flagellin hook IN motif
CFVI03293_RS00460	PF07195	Flagellar hook-associated protein 2 C-terminus
CFVI03293_RS00480	PF02119	Flagellar P-ring protein
CFVI03293_RS00500	PF00460	Flagella basal body rod protein
CFVI03293_RS00500	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFVI03293_RS00510	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CFVI03293_RS00510	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CFVI03293_RS00510	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CFVI03293_RS00510	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CFVI03293_RS00515	PF01050	Mannose-6-phosphate isomerase
CFVI03293_RS00515	PF00483	Nucleotidyl transferase
CFVI03293_RS00520	PF06508	Queuosine biosynthesis protein QueC
CFVI03293_RS00525	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CFVI03293_RS00555	PF00258	Flavodoxin
CFVI03293_RS00560	PF02664	S-Ribosylhomocysteinase (LuxS)
CFVI03293_RS00565	PF03167	Uracil DNA glycosylase superfamily
CFVI03293_RS00570	PF00453	Ribosomal protein L20
CFVI03293_RS00575	PF01632	Ribosomal protein L35
CFVI03293_RS00590	PF02321	Outer membrane efflux protein
CFVI03293_RS00595	PF00873	AcrB/AcrD/AcrF family
CFVI03293_RS00610	PF13746	4Fe-4S dicluster domain
CFVI03293_RS00610	PF11614	IG-like fold at C-terminal of FixG, putative oxidoreductase
CFVI03293_RS00610	PF12801	4Fe-4S binding domain
CFVI03293_RS00615	PF01165	Ribosomal protein S21
CFVI03293_RS00630	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
CFVI03293_RS00635	PF12838	4Fe-4S dicluster domain
CFVI03293_RS00640	PF00374	Nickel-dependent hydrogenase
CFVI03293_RS00640	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
CFVI03293_RS00640	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
CFVI03293_RS00645	PF00361	Proton-conducting membrane transporter
CFVI03293_RS00645	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CFVI03293_RS00650	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
CFVI03293_RS00655	PF00146	NADH dehydrogenase
CFVI03293_RS00660	PF00361	Proton-conducting membrane transporter
CFVI03293_RS00665	PF12800	4Fe-4S binding domain
CFVI03293_RS00665	PF13247	4Fe-4S dicluster domain
CFVI03293_RS00670	PF00221	Aromatic amino acid lyase
CFVI03293_RS00680	PF00890	FAD binding domain
CFVI03293_RS00680	PF04205	FMN-binding domain
CFVI03293_RS00700	PF00486	Transcriptional regulatory protein, C terminal
CFVI03293_RS00700	PF00072	Response regulator receiver domain
CFVI03293_RS00710	PF01967	MoaC family
CFVI03293_RS00730	PF03605	Anaerobic c4-dicarboxylate membrane transporter
CFVI03293_RS00735	PF05992	SbmA/BacA-like family
CFVI03293_RS00745	PF02652	L-lactate permease
CFVI03293_RS00750	PF01595	Cyclin M transmembrane N-terminal domain
CFVI03293_RS00750	PF00571	CBS domain
CFVI03293_RS00750	PF03471	Transporter associated domain
CFVI03293_RS00785	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
CFVI03293_RS00790	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
CFVI03293_RS00795	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
CFVI03293_RS00795	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
CFVI03293_RS00805	PF10531	SLBB domain
CFVI03293_RS00805	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CFVI03293_RS00805	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
CFVI03293_RS00810	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CFVI03293_RS00810	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
CFVI03293_RS00810	PF00384	Molybdopterin oxidoreductase
CFVI03293_RS00815	PF00146	NADH dehydrogenase
CFVI03293_RS00820	PF12838	4Fe-4S dicluster domain
CFVI03293_RS00825	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
CFVI03293_RS00830	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
CFVI03293_RS00835	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
CFVI03293_RS00835	PF00361	Proton-conducting membrane transporter
CFVI03293_RS00840	PF00361	Proton-conducting membrane transporter
CFVI03293_RS00845	PF00361	Proton-conducting membrane transporter
CFVI03293_RS00855	PF01891	Cobalt uptake substrate-specific transmembrane region
CFVI03293_RS00870	PF00005	ABC transporter
CFVI03293_RS00875	PF01751	Toprim domain
CFVI03293_RS00875	PF01396	Topoisomerase DNA binding C4 zinc finger
CFVI03293_RS00875	PF01131	DNA topoisomerase
CFVI03293_RS00880	PF06968	Biotin and Thiamin Synthesis associated domain
CFVI03293_RS00880	PF04055	Radical SAM superfamily
CFVI03293_RS00885	PF00999	Sodium/hydrogen exchanger family
CFVI03293_RS00885	PF02080	TrkA-C domain
CFVI03293_RS00885	PF02254	TrkA-N domain
CFVI03293_RS00890	PF00285	Citrate synthase, C-terminal domain
CFVI03293_RS00895	PF00459	Inositol monophosphatase family
CFVI03293_RS00900	PF12849	PBP superfamily domain
CFVI03293_RS00905	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS00910	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS00915	PF00005	ABC transporter
CFVI03293_RS00920	PF07690	Major Facilitator Superfamily
CFVI03293_RS00925	PF08447	PAS fold
CFVI03293_RS00925	PF13426	PAS domain
CFVI03293_RS00925	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS00945	PF03453	MoeA N-terminal region (domain I and II)
CFVI03293_RS00945	PF03454	MoeA C-terminal region (domain IV)
CFVI03293_RS00945	PF00994	Probable molybdopterin binding domain
CFVI03293_RS00960	PF02391	MoaE protein
CFVI03293_RS00975	PF00330	Aconitase family (aconitate hydratase)
CFVI03293_RS00980	PF12804	MobA-like NTP transferase domain
CFVI03293_RS00985	PF02253	Phospholipase A1
CFVI03293_RS01000	PF00113	Enolase, C-terminal TIM barrel domain
CFVI03293_RS01000	PF03952	Enolase, N-terminal domain
CFVI03293_RS01005	PF00154	recA bacterial DNA recombination protein
CFVI03293_RS01010	PF02621	Menaquinone biosynthesis
CFVI03293_RS01020	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
CFVI03293_RS01045	PF13288	DXP reductoisomerase C-terminal domain
CFVI03293_RS01045	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
CFVI03293_RS01045	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
CFVI03293_RS01050	PF03352	Methyladenine glycosylase
CFVI03293_RS01050	PF00117	Glutamine amidotransferase class-I
CFVI03293_RS01050	PF00958	GMP synthase C terminal domain
CFVI03293_RS01050	PF13302	Acetyltransferase (GNAT) domain
CFVI03293_RS01050	PF13673	Acetyltransferase (GNAT) domain
CFVI03293_RS01055	PF00860	Permease family
CFVI03293_RS01070	PF00814	Glycoprotease family
CFVI03293_RS01100	PF06463	Molybdenum Cofactor Synthesis C
CFVI03293_RS01100	PF04055	Radical SAM superfamily
CFVI03293_RS01110	PF00465	Iron-containing alcohol dehydrogenase 
CFVI03293_RS01140	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
CFVI03293_RS01140	PF00476	DNA polymerase family A
CFVI03293_RS01140	PF01612	3'-5' exonuclease
CFVI03293_RS01140	PF01367	5'-3' exonuclease, C-terminal SAM fold
CFVI03293_RS01145	PF01618	MotA/TolQ/ExbB proton channel family
CFVI03293_RS01150	PF00691	OmpA family
CFVI03293_RS01150	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
CFVI03293_RS01155	PF00037	4Fe-4S binding domain
CFVI03293_RS01160	PF00334	Nucleoside diphosphate kinase
CFVI03293_RS01170	PF01783	Ribosomal L32p protein family
CFVI03293_RS01175	PF02504	Fatty acid synthesis protein
CFVI03293_RS01180	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
CFVI03293_RS01180	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
CFVI03293_RS01195	PF02660	Glycerol-3-phosphate acyltransferase
CFVI03293_RS01205	PF00072	Response regulator receiver domain
CFVI03293_RS01205	PF00486	Transcriptional regulatory protein, C terminal
CFVI03293_RS01210	PF00512	His Kinase A (phospho-acceptor) domain
CFVI03293_RS01210	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS01215	PF00037	4Fe-4S binding domain
CFVI03293_RS01230	PF01207	Dihydrouridine synthase (Dus)
CFVI03293_RS01245	PF02590	Predicted SPOUT methyltransferase
CFVI03293_RS01250	PF17848	Acetyl-coA carboxylase zinc finger domain
CFVI03293_RS01250	PF01039	Carboxyl transferase domain
CFVI03293_RS01255	PF10417	C-terminal domain of 1-Cys peroxiredoxin
CFVI03293_RS01255	PF00578	AhpC/TSA family
CFVI03293_RS01265	PF00266	Aminotransferase class-V
CFVI03293_RS01270	PF02601	Exonuclease VII, large subunit
CFVI03293_RS01270	PF13742	OB-fold nucleic acid binding domain
CFVI03293_RS01275	PF01209	ubiE/COQ5 methyltransferase family
CFVI03293_RS01290	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
CFVI03293_RS01295	PF00005	ABC transporter
CFVI03293_RS01315	PF02779	Transketolase, pyrimidine binding domain
CFVI03293_RS01315	PF02780	Transketolase, C-terminal domain
CFVI03293_RS01315	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
CFVI03293_RS01325	PF14842	FliG N-terminal domain
CFVI03293_RS01325	PF14841	FliG middle domain
CFVI03293_RS01325	PF01706	FliG C-terminal domain
CFVI03293_RS01330	PF01514	Secretory protein of YscJ/FliF family
CFVI03293_RS01330	PF08345	Flagellar M-ring protein C-terminal
CFVI03293_RS01335	PF00155	Aminotransferase class I and II
CFVI03293_RS01340	PF01817	Chorismate mutase type II
CFVI03293_RS01340	PF01842	ACT domain
CFVI03293_RS01340	PF00800	Prephenate dehydratase
CFVI03293_RS01350	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CFVI03293_RS01350	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CFVI03293_RS01365	PF01725	Ham1 family
CFVI03293_RS01375	PF00296	Luciferase-like monooxygenase
CFVI03293_RS01380	PF01497	Periplasmic binding protein
CFVI03293_RS01385	PF01032	FecCD transport family
CFVI03293_RS01390	PF00005	ABC transporter
CFVI03293_RS01400	PF01618	MotA/TolQ/ExbB proton channel family
CFVI03293_RS01405	PF02472	Biopolymer transport protein ExbD/TolR
CFVI03293_RS01415	PF16653	Saccharopine dehydrogenase C-terminal domain
CFVI03293_RS01415	PF03435	Saccharopine dehydrogenase NADP binding domain
CFVI03293_RS01425	PF01197	Ribosomal protein L31
CFVI03293_RS01430	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
CFVI03293_RS01435	PF00588	SpoU rRNA Methylase family
CFVI03293_RS01435	PF08032	RNA 2'-O ribose methyltransferase substrate binding
CFVI03293_RS01450	PF00155	Aminotransferase class I and II
CFVI03293_RS01455	PF01842	ACT domain
CFVI03293_RS01455	PF00742	Homoserine dehydrogenase
CFVI03293_RS01455	PF03447	Homoserine dehydrogenase, NAD binding domain
CFVI03293_RS01460	PF02021	Uncharacterised protein family UPF0102
CFVI03293_RS01465	PF00085	Thioredoxin
CFVI03293_RS01470	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFVI03293_RS01480	PF01113	Dihydrodipicolinate reductase, N-terminus
CFVI03293_RS01480	PF05173	Dihydrodipicolinate reductase, C-terminus
CFVI03293_RS01485	PF00156	Phosphoribosyl transferase domain
CFVI03293_RS01500	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
CFVI03293_RS01500	PF01502	Phosphoribosyl-AMP cyclohydrolase
CFVI03293_RS01510	PF01063	Amino-transferase class IV
CFVI03293_RS01545	PF00578	AhpC/TSA family
CFVI03293_RS01555	PF02677	Epoxyqueuosine reductase QueH
CFVI03293_RS01560	PF07977	FabA-like domain
CFVI03293_RS01565	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
CFVI03293_RS01565	PF00132	Bacterial transferase hexapeptide (six repeats)
CFVI03293_RS01570	PF06689	ClpX C4-type zinc finger
CFVI03293_RS01570	PF10431	C-terminal, D2-small domain, of ClpB protein 
CFVI03293_RS01570	PF07724	AAA domain (Cdc48 subfamily)
CFVI03293_RS01585	PF02142	MGS-like domain
CFVI03293_RS01585	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CFVI03293_RS01585	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CFVI03293_RS01600	PF13426	PAS domain
CFVI03293_RS01600	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS01600	PF08447	PAS fold
CFVI03293_RS01610	PF00899	ThiF family
CFVI03293_RS01615	PF01975	Survival protein SurE
CFVI03293_RS01620	PF02684	Lipid-A-disaccharide synthetase
CFVI03293_RS01625	PF01272	Transcription elongation factor, GreA/GreB, C-term
CFVI03293_RS01625	PF03449	Transcription elongation factor, N-terminal
CFVI03293_RS01630	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CFVI03293_RS01630	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CFVI03293_RS01640	PF01584	CheW-like domain
CFVI03293_RS01640	PF00072	Response regulator receiver domain
CFVI03293_RS01645	PF01627	Hpt domain
CFVI03293_RS01645	PF01584	CheW-like domain
CFVI03293_RS01645	PF02895	Signal transducing histidine kinase, homodimeric domain
CFVI03293_RS01645	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS01645	PF00072	Response regulator receiver domain
CFVI03293_RS01650	PF01584	CheW-like domain
CFVI03293_RS01660	PF00923	Transaldolase/Fructose-6-phosphate aldolase
CFVI03293_RS01665	PF00437	Type II/IV secretion system protein
CFVI03293_RS01670	PF14693	Ribosomal protein TL5, C-terminal domain
CFVI03293_RS01670	PF01386	Ribosomal L25p family
CFVI03293_RS01675	PF01195	Peptidyl-tRNA hydrolase
CFVI03293_RS01680	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
CFVI03293_RS01690	PF02769	AIR synthase related protein, C-terminal domain
CFVI03293_RS01690	PF00586	AIR synthase related protein, N-terminal domain
CFVI03293_RS01695	PF00881	Nitroreductase family
CFVI03293_RS01700	PF01312	FlhB HrpN YscU SpaS Family
CFVI03293_RS01705	PF06965	Na+/H+ antiporter 1
CFVI03293_RS01710	PF17760	UvrA interaction domain
CFVI03293_RS01710	PF17755	UvrA DNA-binding domain
CFVI03293_RS01710	PF00005	ABC transporter
CFVI03293_RS01735	PF00425	chorismate binding enzyme
CFVI03293_RS01735	PF04715	Anthranilate synthase component I, N terminal region
CFVI03293_RS01740	PF00591	Glycosyl transferase family, a/b domain
CFVI03293_RS01740	PF02885	Glycosyl transferase family, helical bundle domain
CFVI03293_RS01740	PF00117	Glutamine amidotransferase class-I
CFVI03293_RS01745	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
CFVI03293_RS01750	PF00291	Pyridoxal-phosphate dependent enzyme
CFVI03293_RS01755	PF00290	Tryptophan synthase alpha chain
CFVI03293_RS01765	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
CFVI03293_RS01765	PF04509	CheC-like family
CFVI03293_RS01780	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS01785	PF00005	ABC transporter
CFVI03293_RS01785	PF08402	TOBE domain
CFVI03293_RS01825	PF13188	PAS domain
CFVI03293_RS01825	PF03707	Bacterial signalling protein N terminal repeat
CFVI03293_RS01825	PF00990	Diguanylate cyclase, GGDEF domain
CFVI03293_RS01825	PF00563	EAL domain
CFVI03293_RS01830	PF13393	Histidyl-tRNA synthetase
CFVI03293_RS01835	PF00709	Adenylosuccinate synthetase
CFVI03293_RS01855	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
CFVI03293_RS01855	PF00117	Glutamine amidotransferase class-I
CFVI03293_RS01865	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS01865	PF00989	PAS fold
CFVI03293_RS01865	PF00512	His Kinase A (phospho-acceptor) domain
CFVI03293_RS01870	PF00486	Transcriptional regulatory protein, C terminal
CFVI03293_RS01870	PF00072	Response regulator receiver domain
CFVI03293_RS01875	PF00115	Cytochrome C and Quinol oxidase polypeptide I
CFVI03293_RS01890	PF14715	N-terminal domain of cytochrome oxidase-cbb3, FixP 
CFVI03293_RS01890	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
CFVI03293_RS01915	PF13361	UvrD-like helicase C-terminal domain
CFVI03293_RS01915	PF00580	UvrD/REP helicase N-terminal domain
CFVI03293_RS01915	PF12705	PD-(D/E)XK nuclease superfamily
CFVI03293_RS01920	PF00572	Ribosomal protein L13
CFVI03293_RS01925	PF00380	Ribosomal protein S9/S16
CFVI03293_RS01930	PF00691	OmpA family
CFVI03293_RS01930	PF13488	Glycine zipper
CFVI03293_RS01935	PF05552	Conserved TM helix
CFVI03293_RS01935	PF00924	Mechanosensitive ion channel
CFVI03293_RS01940	PF13419	Haloacid dehalogenase-like hydrolase
CFVI03293_RS01945	PF10371	Domain of unknown function
CFVI03293_RS01945	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
CFVI03293_RS01945	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
CFVI03293_RS01945	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
CFVI03293_RS01945	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CFVI03293_RS01965	PF05538	Campylobacter major outer membrane protein
CFVI03293_RS01970	PF05538	Campylobacter major outer membrane protein
CFVI03293_RS01980	PF13458	Periplasmic binding protein
CFVI03293_RS01985	PF02653	Branched-chain amino acid transport system / permease component
CFVI03293_RS01990	PF11862	Domain of unknown function (DUF3382)
CFVI03293_RS01990	PF02653	Branched-chain amino acid transport system / permease component
CFVI03293_RS01995	PF00005	ABC transporter
CFVI03293_RS01995	PF12399	Branched-chain amino acid ATP-binding cassette transporter
CFVI03293_RS02000	PF00005	ABC transporter
CFVI03293_RS02005	PF05140	ResB-like family 
CFVI03293_RS02005	PF01578	Cytochrome C assembly protein
CFVI03293_RS02015	PF04608	Phosphatidylglycerophosphatase A
CFVI03293_RS02020	PF14306	PUA-like domain
CFVI03293_RS02020	PF01747	ATP-sulfurylase
CFVI03293_RS02025	PF00072	Response regulator receiver domain
CFVI03293_RS02025	PF00486	Transcriptional regulatory protein, C terminal
CFVI03293_RS02030	PF02542	YgbB family
CFVI03293_RS02030	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CFVI03293_RS02035	PF01964	Radical SAM ThiC family
CFVI03293_RS02040	PF01883	Iron-sulfur cluster assembly protein
CFVI03293_RS02040	PF10609	NUBPL iron-transfer P-loop NTPase
CFVI03293_RS02045	PF14602	Hexapeptide repeat of succinyl-transferase
CFVI03293_RS02045	PF14789	Tetrahydrodipicolinate N-succinyltransferase middle
CFVI03293_RS02050	PF00005	ABC transporter
CFVI03293_RS02050	PF12848	ABC transporter
CFVI03293_RS02055	PF13183	4Fe-4S dicluster domain
CFVI03293_RS02055	PF13085	2Fe-2S iron-sulfur cluster binding domain
CFVI03293_RS02060	PF00890	FAD binding domain
CFVI03293_RS02060	PF02910	Fumarate reductase flavoprotein C-term
CFVI03293_RS02065	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
CFVI03293_RS02070	PF01790	Prolipoprotein diacylglyceryl transferase
CFVI03293_RS02080	PF11799	impB/mucB/samB family C-terminal domain
CFVI03293_RS02080	PF00817	impB/mucB/samB family
CFVI03293_RS02080	PF11798	IMS family HHH motif
CFVI03293_RS02085	PF00403	Heavy-metal-associated domain
CFVI03293_RS02100	PF03222	Tryptophan/tyrosine permease family
CFVI03293_RS02105	PF01709	Transcriptional regulator
CFVI03293_RS02110	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
CFVI03293_RS02115	PF00375	Sodium:dicarboxylate symporter family
CFVI03293_RS02120	PF13545	Crp-like helix-turn-helix domain
CFVI03293_RS02120	PF00027	Cyclic nucleotide-binding domain
CFVI03293_RS02125	PF00384	Molybdopterin oxidoreductase
CFVI03293_RS02125	PF01568	Molydopterin dinucleotide binding domain
CFVI03293_RS02125	PF18364	Molybdopterin oxidoreductase N-terminal domain
CFVI03293_RS02140	PF02954	Bacterial regulatory protein, Fis family
CFVI03293_RS02140	PF00158	Sigma-54 interaction domain
CFVI03293_RS02140	PF00072	Response regulator receiver domain
CFVI03293_RS02145	PF01323	DSBA-like thioredoxin domain
CFVI03293_RS02150	PF02600	Disulfide bond formation protein DsbB
CFVI03293_RS02160	PF17425	Arylsulfotransferase Ig-like domain
CFVI03293_RS02160	PF05935	Arylsulfotransferase (ASST)
CFVI03293_RS02165	PF00350	Dynamin family
CFVI03293_RS02170	PF00350	Dynamin family
CFVI03293_RS02180	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
CFVI03293_RS02180	PF18764	Nitrous oxide reductase propeller repeat
CFVI03293_RS02180	PF18793	Nitrous oxide reductase propeller repeat 2
CFVI03293_RS02210	PF12838	4Fe-4S dicluster domain
CFVI03293_RS02210	PF12800	4Fe-4S binding domain
CFVI03293_RS02225	PF12801	4Fe-4S binding domain
CFVI03293_RS02225	PF13237	4Fe-4S dicluster domain
CFVI03293_RS02230	PF00005	ABC transporter
CFVI03293_RS02230	PF08402	TOBE domain
CFVI03293_RS02255	PF00486	Transcriptional regulatory protein, C terminal
CFVI03293_RS02255	PF00072	Response regulator receiver domain
CFVI03293_RS02295	PF13635	Domain of unknown function (DUF4143)
CFVI03293_RS02295	PF13173	AAA domain
CFVI03293_RS02305	PF15738	Bacterial toxin of type II toxin-antitoxin system, YafQ 
CFVI03293_RS02345	PF02548	Ketopantoate hydroxymethyltransferase
CFVI03293_RS02355	PF17864	RuvB AAA lid domain
CFVI03293_RS02355	PF05491	RuvB C-terminal winged helix domain
CFVI03293_RS02355	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CFVI03293_RS02360	PF01594	AI-2E family transporter
CFVI03293_RS02370	PF00005	ABC transporter
CFVI03293_RS02385	PF02130	Uncharacterized protein family UPF0054
CFVI03293_RS02405	PF00664	ABC transporter transmembrane region
CFVI03293_RS02405	PF00005	ABC transporter
CFVI03293_RS02435	PF13439	Glycosyltransferase Family 4
CFVI03293_RS02435	PF00534	Glycosyl transferases group 1
CFVI03293_RS02450	PF00005	ABC transporter
CFVI03293_RS02465	PF02397	Bacterial sugar transferase
CFVI03293_RS02470	PF18073	Rubredoxin metal binding domain
CFVI03293_RS02475	PF00448	SRP54-type protein, GTPase domain
CFVI03293_RS02480	PF00578	AhpC/TSA family
CFVI03293_RS02490	PF12072	Domain of unknown function (DUF3552)
CFVI03293_RS02490	PF01966	HD domain
CFVI03293_RS02535	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS02535	PF17200	Single Cache domain 2
CFVI03293_RS02535	PF00672	HAMP domain
CFVI03293_RS02540	PF00202	Aminotransferase class-III
CFVI03293_RS02545	PF00730	HhH-GPD superfamily base excision DNA repair protein
CFVI03293_RS02545	PF10576	Iron-sulfur binding domain of endonuclease III
CFVI03293_RS02545	PF00633	Helix-hairpin-helix motif
CFVI03293_RS02555	PF01116	Fructose-bisphosphate aldolase class-II
CFVI03293_RS02575	PF00815	Histidinol dehydrogenase
CFVI03293_RS02580	PF00669	Bacterial flagellin N-terminal helical region
CFVI03293_RS02585	PF04542	Sigma-70 region 2 
CFVI03293_RS02585	PF04539	Sigma-70 region 3
CFVI03293_RS02585	PF00140	Sigma-70 factor, region 1.2
CFVI03293_RS02585	PF04545	Sigma-70, region 4
CFVI03293_RS02590	PF00460	Flagella basal body rod protein
CFVI03293_RS02590	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFVI03293_RS02595	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFVI03293_RS02595	PF00460	Flagella basal body rod protein
CFVI03293_RS02600	PF03239	Iron permease FTR1 family
CFVI03293_RS02605	PF10634	Fe2+ transport protein
CFVI03293_RS02625	PF00005	ABC transporter
CFVI03293_RS02635	PF04371	Porphyromonas-type peptidyl-arginine deiminase
CFVI03293_RS02640	PF16916	Dimerisation domain of Zinc Transporter
CFVI03293_RS02640	PF01545	Cation efflux family
CFVI03293_RS02645	PF00795	Carbon-nitrogen hydrolase
CFVI03293_RS02650	PF03616	Sodium/glutamate symporter
CFVI03293_RS02660	PF01554	MatE
CFVI03293_RS02665	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS02665	PF07689	KaiB domain
CFVI03293_RS02665	PF00512	His Kinase A (phospho-acceptor) domain
CFVI03293_RS02670	PF00072	Response regulator receiver domain
CFVI03293_RS02670	PF00486	Transcriptional regulatory protein, C terminal
CFVI03293_RS02675	PF00083	Sugar (and other) transporter
CFVI03293_RS02675	PF08946	Osmosensory transporter coiled coil
CFVI03293_RS02680	PF16326	ABC transporter C-terminal domain
CFVI03293_RS02680	PF12848	ABC transporter
CFVI03293_RS02680	PF00005	ABC transporter
CFVI03293_RS02685	PF00209	Sodium:neurotransmitter symporter family
CFVI03293_RS02690	PF16491	CAAX prenyl protease N-terminal, five membrane helices
CFVI03293_RS02690	PF01435	Peptidase family M48
CFVI03293_RS02695	PF17827	PrmC N-terminal domain
CFVI03293_RS02695	PF05175	Methyltransferase small domain
CFVI03293_RS02710	PF03061	Thioesterase superfamily
CFVI03293_RS02730	PF00909	Ammonium Transporter Family
CFVI03293_RS02735	PF00543	Nitrogen regulatory protein P-II
CFVI03293_RS02740	PF00468	Ribosomal protein L34
CFVI03293_RS02745	PF00825	Ribonuclease P
CFVI03293_RS02750	PF01809	Putative membrane protein insertion efficiency factor
CFVI03293_RS02755	PF02096	60Kd inner membrane protein
CFVI03293_RS02755	PF14849	YidC periplasmic domain
CFVI03293_RS02765	PF12631	MnmE helical domain
CFVI03293_RS02765	PF10396	GTP-binding protein TrmE N-terminus
CFVI03293_RS02765	PF01926	50S ribosome-binding GTPase
CFVI03293_RS02770	PF02769	AIR synthase related protein, C-terminal domain
CFVI03293_RS02770	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
CFVI03293_RS02770	PF00586	AIR synthase related protein, N-terminal domain
CFVI03293_RS02775	PF05099	Tellurite resistance protein TerB
CFVI03293_RS02775	PF00226	DnaJ domain
CFVI03293_RS02780	PF01808	AICARFT/IMPCHase bienzyme
CFVI03293_RS02780	PF02142	MGS-like domain
CFVI03293_RS02795	PF01883	Iron-sulfur cluster assembly protein
CFVI03293_RS02800	PF00672	HAMP domain
CFVI03293_RS02800	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS02805	PF01063	Amino-transferase class IV
CFVI03293_RS02825	PF01795	MraW methylase family
CFVI03293_RS02835	PF13145	PPIC-type PPIASE domain
CFVI03293_RS02840	PF02491	SHS2 domain inserted in FTSA
CFVI03293_RS02845	PF12327	FtsZ family, C-terminal domain
CFVI03293_RS02845	PF00091	Tubulin/FtsZ family, GTPase domain
CFVI03293_RS02855	PF02689	Helicase
CFVI03293_RS02855	PF05970	PIF1-like helicase
CFVI03293_RS02865	PF03548	Outer membrane lipoprotein carrier protein LolA
CFVI03293_RS02870	PF07516	SecA Wing and Scaffold domain
CFVI03293_RS02870	PF07517	SecA DEAD-like domain
CFVI03293_RS02870	PF01043	SecA preprotein cross-linking domain
CFVI03293_RS02870	PF02810	SEC-C motif
CFVI03293_RS02875	PF12704	MacB-like periplasmic core domain
CFVI03293_RS02875	PF02687	FtsX-like permease family
CFVI03293_RS02890	PF07690	Major Facilitator Superfamily
CFVI03293_RS02900	PF00860	Permease family
CFVI03293_RS02905	PF04055	Radical SAM superfamily
CFVI03293_RS02910	PF08335	GlnD PII-uridylyltransferase
CFVI03293_RS02910	PF01842	ACT domain
CFVI03293_RS02910	PF01966	HD domain
CFVI03293_RS02915	PF01380	SIS domain
CFVI03293_RS02920	PF04143	Sulphur transport
CFVI03293_RS02925	PF01206	Sulfurtransferase TusA
CFVI03293_RS02930	PF01177	Asp/Glu/Hydantoin racemase
CFVI03293_RS02935	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
CFVI03293_RS03010	PF00072	Response regulator receiver domain
CFVI03293_RS03010	PF00990	Diguanylate cyclase, GGDEF domain
CFVI03293_RS03020	PF02464	Competence-damaged protein
CFVI03293_RS03020	PF00994	Probable molybdopterin binding domain
CFVI03293_RS03030	PF00133	tRNA synthetases class I (I, L, M and V)
CFVI03293_RS03030	PF08264	Anticodon-binding domain of tRNA
CFVI03293_RS03035	PF01425	Amidase
CFVI03293_RS03040	PF00478	IMP dehydrogenase / GMP reductase domain
CFVI03293_RS03040	PF00571	CBS domain
CFVI03293_RS03045	PF00561	alpha/beta hydrolase fold
CFVI03293_RS03050	PF02609	Exonuclease VII small subunit
CFVI03293_RS03060	PF01225	Mur ligase family, catalytic domain
CFVI03293_RS03060	PF02875	Mur ligase family, glutamate ligase domain
CFVI03293_RS03060	PF08245	Mur ligase middle domain
CFVI03293_RS03070	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
CFVI03293_RS03075	PF12857	TOBE-like domain
CFVI03293_RS03075	PF17850	CysA C-terminal regulatory domain
CFVI03293_RS03075	PF00005	ABC transporter
CFVI03293_RS03080	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS03100	PF00488	MutS domain V
CFVI03293_RS03100	PF01713	Smr domain
CFVI03293_RS03105	PF00563	EAL domain
CFVI03293_RS03105	PF08495	FIST N domain
CFVI03293_RS03105	PF10442	FIST C domain
CFVI03293_RS03105	PF00990	Diguanylate cyclase, GGDEF domain
CFVI03293_RS03115	PF01546	Peptidase family M20/M25/M40
CFVI03293_RS03115	PF07687	Peptidase dimerisation domain
CFVI03293_RS03120	PF06039	Malate:quinone oxidoreductase (Mqo)
CFVI03293_RS03130	PF02887	Pyruvate kinase, alpha/beta domain
CFVI03293_RS03130	PF00391	PEP-utilising enzyme, mobile domain
CFVI03293_RS03130	PF00224	Pyruvate kinase, barrel domain
CFVI03293_RS03135	PF05193	Peptidase M16 inactive domain
CFVI03293_RS03140	PF04851	Type III restriction enzyme, res subunit
CFVI03293_RS03140	PF00271	Helicase conserved C-terminal domain
CFVI03293_RS03145	PF01474	Class-II DAHP synthetase family
CFVI03293_RS03150	PF00171	Aldehyde dehydrogenase family
CFVI03293_RS03155	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFVI03293_RS03165	PF05175	Methyltransferase small domain
CFVI03293_RS03165	PF08468	Methyltransferase small domain N-terminal
CFVI03293_RS03170	PF03692	Putative zinc- or iron-chelating domain
CFVI03293_RS03180	PF00218	Indole-3-glycerol phosphate synthase
CFVI03293_RS03190	PF03883	Peroxide stress protein YaaA
CFVI03293_RS03220	PF02785	Biotin carboxylase C-terminal domain
CFVI03293_RS03220	PF00289	Biotin carboxylase, N-terminal domain
CFVI03293_RS03220	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CFVI03293_RS03230	PF04376	Arginine-tRNA-protein transferase, N terminus
CFVI03293_RS03230	PF04377	Arginine-tRNA-protein transferase, C terminus
CFVI03293_RS03235	PF00684	DnaJ central domain
CFVI03293_RS03235	PF01556	DnaJ C terminal domain
CFVI03293_RS03235	PF00226	DnaJ domain
CFVI03293_RS03240	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
CFVI03293_RS03245	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
CFVI03293_RS03250	PF01384	Phosphate transporter family
CFVI03293_RS03255	PF00669	Bacterial flagellin N-terminal helical region
CFVI03293_RS03255	PF00700	Bacterial flagellin C-terminal helical region
CFVI03293_RS03260	PF17854	FtsK alpha domain
CFVI03293_RS03260	PF09397	Ftsk gamma domain
CFVI03293_RS03260	PF01580	FtsK/SpoIIIE family
CFVI03293_RS03275	PF00348	Polyprenyl synthetase
CFVI03293_RS03280	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
CFVI03293_RS03280	PF01488	Shikimate / quinate 5-dehydrogenase
CFVI03293_RS03280	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
CFVI03293_RS03285	PF04073	Aminoacyl-tRNA editing domain
CFVI03293_RS03285	PF03129	Anticodon binding domain
CFVI03293_RS03285	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CFVI03293_RS03295	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
CFVI03293_RS03295	PF03900	Porphobilinogen deaminase, C-terminal domain
CFVI03293_RS03300	PF03631	Virulence factor BrkB
CFVI03293_RS03305	PF02913	FAD linked oxidases, C-terminal domain
CFVI03293_RS03305	PF01565	FAD binding domain 
CFVI03293_RS03315	PF01551	Peptidase family M23
CFVI03293_RS03315	PF08525	Opacity-associated protein A N-terminal motif
CFVI03293_RS03315	PF01476	LysM domain
CFVI03293_RS03320	PF01769	Divalent cation transporter
CFVI03293_RS03320	PF00571	CBS domain
CFVI03293_RS03320	PF03448	MgtE intracellular N domain
CFVI03293_RS03325	PF00293	NUDIX domain
CFVI03293_RS03335	PF00166	Chaperonin 10 Kd subunit
CFVI03293_RS03340	PF00118	TCP-1/cpn60 chaperonin family
CFVI03293_RS03345	PF00762	Ferrochelatase
CFVI03293_RS03350	PF03717	Penicillin-binding Protein dimerisation domain
CFVI03293_RS03350	PF00905	Penicillin binding protein transpeptidase domain
CFVI03293_RS03355	PF02049	Flagellar hook-basal body complex protein FliE
CFVI03293_RS03360	PF00460	Flagella basal body rod protein
CFVI03293_RS03360	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFVI03293_RS03365	PF00460	Flagella basal body rod protein
CFVI03293_RS03370	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
CFVI03293_RS03380	PF00004	ATPase family associated with various cellular activities (AAA)
CFVI03293_RS03380	PF07724	AAA domain (Cdc48 subfamily)
CFVI03293_RS03380	PF02861	Clp amino terminal domain, pathogenicity island component
CFVI03293_RS03380	PF10431	C-terminal, D2-small domain, of ClpB protein 
CFVI03293_RS03380	PF17871	AAA lid domain
CFVI03293_RS03385	PF02617	ATP-dependent Clp protease adaptor protein ClpS
CFVI03293_RS03395	PF01668	SmpB protein
CFVI03293_RS03400	PF00288	GHMP kinases N terminal domain
CFVI03293_RS03405	PF02599	Global regulator protein family
CFVI03293_RS03410	PF01509	TruB family pseudouridylate synthase (N terminal domain)
CFVI03293_RS03415	PF13361	UvrD-like helicase C-terminal domain
CFVI03293_RS03415	PF00580	UvrD/REP helicase N-terminal domain
CFVI03293_RS03420	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFVI03293_RS03435	PF00375	Sodium:dicarboxylate symporter family
CFVI03293_RS03440	PF02773	S-adenosylmethionine synthetase, C-terminal domain
CFVI03293_RS03440	PF02772	S-adenosylmethionine synthetase, central domain
CFVI03293_RS03440	PF00438	S-adenosylmethionine synthetase, N-terminal domain
CFVI03293_RS03445	PF01297	Zinc-uptake complex component A periplasmic
CFVI03293_RS03450	PF00005	ABC transporter
CFVI03293_RS03455	PF00950	ABC 3 transport family
CFVI03293_RS03460	PF00950	ABC 3 transport family
CFVI03293_RS03470	PF02699	Preprotein translocase subunit
CFVI03293_RS03475	PF02355	Protein export membrane protein
CFVI03293_RS03480	PF07549	SecD/SecF GG Motif
CFVI03293_RS03480	PF02355	Protein export membrane protein
CFVI03293_RS03490	PF13603	Leucyl-tRNA synthetase, Domain 2
CFVI03293_RS03490	PF00133	tRNA synthetases class I (I, L, M and V)
CFVI03293_RS03490	PF09334	tRNA synthetases class I (M)
CFVI03293_RS03500	PF00990	Diguanylate cyclase, GGDEF domain
CFVI03293_RS03505	PF08245	Mur ligase middle domain
CFVI03293_RS03505	PF02875	Mur ligase family, glutamate ligase domain
CFVI03293_RS03510	PF01551	Peptidase family M23
CFVI03293_RS03510	PF04225	Opacity-associated protein A LysM-like domain
CFVI03293_RS03520	PF02559	CarD-like/TRCF domain
CFVI03293_RS03520	PF17757	UvrB interaction domain
CFVI03293_RS03520	PF03461	TRCF domain
CFVI03293_RS03520	PF00271	Helicase conserved C-terminal domain
CFVI03293_RS03520	PF00270	DEAD/DEAH box helicase
CFVI03293_RS03545	PF13380	CoA binding domain
CFVI03293_RS03550	PF00291	Pyridoxal-phosphate dependent enzyme
CFVI03293_RS03550	PF13291	ACT domain
CFVI03293_RS03570	PF01416	tRNA pseudouridine synthase
CFVI03293_RS03580	PF06750	Bacterial Peptidase A24 N-terminal domain
CFVI03293_RS03580	PF01478	Type IV leader peptidase family
CFVI03293_RS03585	PF01255	Putative undecaprenyl diphosphate synthase
CFVI03293_RS03595	PF02441	Flavoprotein
CFVI03293_RS03595	PF04127	DNA / pantothenate metabolism flavoprotein
CFVI03293_RS03600	PF00132	Bacterial transferase hexapeptide (six repeats)
CFVI03293_RS03600	PF12804	MobA-like NTP transferase domain
CFVI03293_RS03605	PF00813	FliP family
CFVI03293_RS03620	PF02445	Quinolinate synthetase A protein
CFVI03293_RS03625	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
CFVI03293_RS03630	PF00005	ABC transporter
CFVI03293_RS03630	PF12704	MacB-like periplasmic core domain
CFVI03293_RS03630	PF02687	FtsX-like permease family
CFVI03293_RS03635	PF02321	Outer membrane efflux protein
CFVI03293_RS03650	PF00486	Transcriptional regulatory protein, C terminal
CFVI03293_RS03650	PF00072	Response regulator receiver domain
CFVI03293_RS03655	PF17820	PDZ domain
CFVI03293_RS03655	PF13180	PDZ domain
CFVI03293_RS03660	PF01556	DnaJ C terminal domain
CFVI03293_RS03660	PF00226	DnaJ domain
CFVI03293_RS03665	PF13411	MerR HTH family regulatory protein
CFVI03293_RS03670	PF02254	TrkA-N domain
CFVI03293_RS03670	PF00999	Sodium/hydrogen exchanger family
CFVI03293_RS03700	PF00694	Aconitase C-terminal domain
CFVI03293_RS03705	PF00180	Isocitrate/isopropylmalate dehydrogenase
CFVI03293_RS03720	PF12627	Probable RNA and SrmB- binding site of polymerase A
CFVI03293_RS03720	PF01743	Poly A polymerase head domain
CFVI03293_RS03720	PF01966	HD domain
CFVI03293_RS03725	PF02541	Ppx/GppA phosphatase family
CFVI03293_RS03735	PF13426	PAS domain
CFVI03293_RS03735	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS03735	PF08447	PAS fold
CFVI03293_RS03745	PF00482	Type II secretion system (T2SS), protein F
CFVI03293_RS03750	PF00437	Type II/IV secretion system protein
CFVI03293_RS03765	PF07660	Secretin and TonB N terminus short domain
CFVI03293_RS03765	PF03958	Bacterial type II/III secretion system short domain
CFVI03293_RS03765	PF00263	Bacterial type II and III secretion system protein
CFVI03293_RS03765	PF11741	AMIN domain
CFVI03293_RS03785	PF07650	KH domain
CFVI03293_RS03785	PF01926	50S ribosome-binding GTPase
CFVI03293_RS03790	PF07724	AAA domain (Cdc48 subfamily)
CFVI03293_RS03790	PF10431	C-terminal, D2-small domain, of ClpB protein 
CFVI03293_RS03795	PF00227	Proteasome subunit
CFVI03293_RS03800	PF03948	Ribosomal protein L9, C-terminal domain
CFVI03293_RS03800	PF01281	Ribosomal protein L9, N-terminal domain
CFVI03293_RS03805	PF00925	GTP cyclohydrolase II
CFVI03293_RS03805	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
CFVI03293_RS03810	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
CFVI03293_RS03810	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
CFVI03293_RS03815	PF00330	Aconitase family (aconitate hydratase)
CFVI03293_RS03815	PF11791	Aconitate B N-terminal domain
CFVI03293_RS03815	PF06434	Aconitate hydratase 2 N-terminus
CFVI03293_RS03830	PF01152	Bacterial-like globin
CFVI03293_RS03845	PF12161	HsdM N-terminal domain
CFVI03293_RS03845	PF02384	N-6 DNA Methylase
CFVI03293_RS03870	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
CFVI03293_RS03870	PF11867	Domain of unknown function (DUF3387)
CFVI03293_RS03870	PF18766	SWI2/SNF2 ATPase
CFVI03293_RS03880	PF04551	GcpE protein
CFVI03293_RS03885	PF00772	DnaB-like helicase N terminal domain
CFVI03293_RS03885	PF03796	DnaB-like helicase C terminal domain
CFVI03293_RS03895	PF01702	Queuine tRNA-ribosyltransferase
CFVI03293_RS03910	PF00106	short chain dehydrogenase
CFVI03293_RS03915	PF05958	tRNA (Uracil-5-)-methyltransferase
CFVI03293_RS03920	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS03920	PF00672	HAMP domain
CFVI03293_RS03920	PF02743	Cache domain
CFVI03293_RS03930	PF01960	ArgJ family
CFVI03293_RS03940	PF00830	Ribosomal L28 family
CFVI03293_RS03945	PF03180	NLPA lipoprotein
CFVI03293_RS03950	PF02581	Thiamine monophosphate synthase
CFVI03293_RS03950	PF08543	Phosphomethylpyrimidine kinase
CFVI03293_RS03955	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS03960	PF00005	ABC transporter
CFVI03293_RS03960	PF09383	NIL domain
CFVI03293_RS03965	PF10458	Valyl tRNA synthetase tRNA binding arm
CFVI03293_RS03965	PF08264	Anticodon-binding domain of tRNA
CFVI03293_RS03965	PF00133	tRNA synthetases class I (I, L, M and V)
CFVI03293_RS03970	PF00206	Lyase
CFVI03293_RS03970	PF10415	Fumarase C C-terminus
CFVI03293_RS03985	PF13361	UvrD-like helicase C-terminal domain
CFVI03293_RS03985	PF00580	UvrD/REP helicase N-terminal domain
CFVI03293_RS03990	PF13649	Methyltransferase domain
CFVI03293_RS04000	PF00183	Hsp90 protein
CFVI03293_RS04005	PF03498	Cytolethal distending toxin A/C domain
CFVI03293_RS04010	PF03372	Endonuclease/Exonuclease/phosphatase family
CFVI03293_RS04020	PF03498	Cytolethal distending toxin A/C domain
CFVI03293_RS04025	PF03372	Endonuclease/Exonuclease/phosphatase family
CFVI03293_RS04035	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
CFVI03293_RS04040	PF01553	Acyltransferase
CFVI03293_RS04055	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
CFVI03293_RS04060	PF01259	SAICAR synthetase
CFVI03293_RS04065	PF13180	PDZ domain
CFVI03293_RS04065	PF03572	Peptidase family S41
CFVI03293_RS04070	PF07724	AAA domain (Cdc48 subfamily)
CFVI03293_RS04070	PF02861	Clp amino terminal domain, pathogenicity island component
CFVI03293_RS04070	PF00004	ATPase family associated with various cellular activities (AAA)
CFVI03293_RS04070	PF17871	AAA lid domain
CFVI03293_RS04070	PF10431	C-terminal, D2-small domain, of ClpB protein 
CFVI03293_RS04090	PF00374	Nickel-dependent hydrogenase
CFVI03293_RS04095	PF01292	Prokaryotic cytochrome b561
CFVI03293_RS04100	PF01750	Hydrogenase maturation protease
CFVI03293_RS04110	PF01300	Telomere recombination
CFVI03293_RS04110	PF17788	HypF Kae1-like domain
CFVI03293_RS04110	PF00708	Acylphosphatase
CFVI03293_RS04110	PF07503	HypF finger
CFVI03293_RS04115	PF01402	Ribbon-helix-helix protein, copG family
CFVI03293_RS04115	PF08753	NikR C terminal nickel binding domain
CFVI03293_RS04120	PF02492	CobW/HypB/UreG, nucleotide-binding domain
CFVI03293_RS04125	PF01455	HupF/HypC family
CFVI03293_RS04130	PF01924	Hydrogenase formation hypA family
CFVI03293_RS04135	PF00586	AIR synthase related protein, N-terminal domain
CFVI03293_RS04135	PF02769	AIR synthase related protein, C-terminal domain
CFVI03293_RS04140	PF01155	Hydrogenase/urease nickel incorporation, metallochaperone, hypA
CFVI03293_RS04155	PF03458	UPF0126 domain
CFVI03293_RS04160	PF00202	Aminotransferase class-III
CFVI03293_RS04165	PF01557	Fumarylacetoacetate (FAA) hydrolase family
CFVI03293_RS04170	PF03748	Flagellar basal body-associated protein FliL
CFVI03293_RS04175	PF01648	4'-phosphopantetheinyl transferase superfamily
CFVI03293_RS04180	PF00291	Pyridoxal-phosphate dependent enzyme
CFVI03293_RS04185	PF02082	Transcriptional regulator
CFVI03293_RS04190	PF01053	Cys/Met metabolism PLP-dependent enzyme
CFVI03293_RS04195	PF03063	Prismane/CO dehydrogenase family
CFVI03293_RS04200	PF00171	Aldehyde dehydrogenase family
CFVI03293_RS04220	PF03971	Monomeric isocitrate dehydrogenase
CFVI03293_RS04225	PF00056	lactate/malate dehydrogenase, NAD binding domain
CFVI03293_RS04225	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
CFVI03293_RS04230	PF00549	CoA-ligase
CFVI03293_RS04230	PF08442	ATP-grasp domain
CFVI03293_RS04235	PF00549	CoA-ligase
CFVI03293_RS04235	PF02629	CoA binding domain
CFVI03293_RS04245	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
CFVI03293_RS04245	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
CFVI03293_RS04245	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
CFVI03293_RS04250	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CFVI03293_RS04250	PF00205	Thiamine pyrophosphate enzyme, central domain
CFVI03293_RS04250	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CFVI03293_RS04280	PF00258	Flavodoxin
CFVI03293_RS04290	PF00535	Glycosyl transferase family 2
CFVI03293_RS04290	PF01501	Glycosyl transferase family 8
CFVI03293_RS04295	PF00155	Aminotransferase class I and II
CFVI03293_RS04300	PF06426	Serine acetyltransferase, N-terminal 
CFVI03293_RS04300	PF00132	Bacterial transferase hexapeptide (six repeats)
CFVI03293_RS04305	PF17810	Arginine decarboxylase helical bundle domain
CFVI03293_RS04305	PF17944	Arginine decarboxylase C-terminal helical extension
CFVI03293_RS04305	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
CFVI03293_RS04310	PF03129	Anticodon binding domain
CFVI03293_RS04310	PF13393	Histidyl-tRNA synthetase
CFVI03293_RS04315	PF02223	Thymidylate kinase
CFVI03293_RS04320	PF01467	Cytidylyltransferase-like
CFVI03293_RS04335	PF00994	Probable molybdopterin binding domain
CFVI03293_RS04335	PF03453	MoeA N-terminal region (domain I and II)
CFVI03293_RS04335	PF03454	MoeA C-terminal region (domain IV)
CFVI03293_RS04340	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CFVI03293_RS04350	PF02589	LUD domain
CFVI03293_RS04355	PF11870	Domain of unknown function (DUF3390)
CFVI03293_RS04355	PF02589	LUD domain
CFVI03293_RS04355	PF13183	4Fe-4S dicluster domain
CFVI03293_RS04360	PF02754	Cysteine-rich domain
CFVI03293_RS04370	PF04305	Protein of unknown function (DUF455)
CFVI03293_RS04375	PF00300	Histidine phosphatase superfamily (branch 1)
CFVI03293_RS04390	PF08267	Cobalamin-independent synthase, N-terminal domain
CFVI03293_RS04390	PF01717	Cobalamin-independent synthase, Catalytic domain
CFVI03293_RS04400	PF13089	Polyphosphate kinase N-terminal domain
CFVI03293_RS04400	PF17941	Polyphosphate kinase C-terminal domain 1
CFVI03293_RS04400	PF02503	Polyphosphate kinase middle domain
CFVI03293_RS04400	PF13090	Polyphosphate kinase C-terminal domain 2
CFVI03293_RS04420	PF00271	Helicase conserved C-terminal domain
CFVI03293_RS04420	PF17757	UvrB interaction domain
CFVI03293_RS04420	PF12344	Ultra-violet resistance protein B
CFVI03293_RS04420	PF02151	UvrB/uvrC motif
CFVI03293_RS04420	PF04851	Type III restriction enzyme, res subunit
CFVI03293_RS04445	PF08334	Type II secretion system (T2SS), protein G
CFVI03293_RS04445	PF07963	Prokaryotic N-terminal methylation motif
CFVI03293_RS04450	PF00114	Pilin (bacterial filament)
CFVI03293_RS04450	PF07963	Prokaryotic N-terminal methylation motif
CFVI03293_RS04455	PF00270	DEAD/DEAH box helicase
CFVI03293_RS04455	PF18074	Primosomal protein N C-terminal domain
CFVI03293_RS04455	PF00271	Helicase conserved C-terminal domain
CFVI03293_RS04455	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
CFVI03293_RS04455	PF17764	3′ DNA-binding domain (3′BD)
CFVI03293_RS04465	PF00834	Ribulose-phosphate 3 epimerase family
CFVI03293_RS04470	PF02163	Peptidase family M50
CFVI03293_RS04470	PF17820	PDZ domain
CFVI03293_RS04475	PF01168	Alanine racemase, N-terminal domain
CFVI03293_RS04480	PF00994	Probable molybdopterin binding domain
CFVI03293_RS04485	PF01434	Peptidase family M41
CFVI03293_RS04485	PF06480	FtsH Extracellular
CFVI03293_RS04485	PF17862	AAA+ lid domain
CFVI03293_RS04485	PF00004	ATPase family associated with various cellular activities (AAA)
CFVI03293_RS04490	PF04055	Radical SAM superfamily
CFVI03293_RS04490	PF00919	Uncharacterized protein family UPF0004
CFVI03293_RS04500	PF01761	3-dehydroquinate synthase
CFVI03293_RS04505	PF04552	Sigma-54, DNA binding domain
CFVI03293_RS04505	PF04963	Sigma-54 factor, core binding domain
CFVI03293_RS04505	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
CFVI03293_RS04510	PF00005	ABC transporter
CFVI03293_RS04515	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
CFVI03293_RS04520	PF01479	S4 domain
CFVI03293_RS04530	PF02472	Biopolymer transport protein ExbD/TolR
CFVI03293_RS04535	PF01618	MotA/TolQ/ExbB proton channel family
CFVI03293_RS04540	PF00216	Bacterial DNA-binding protein
CFVI03293_RS04545	PF04101	Glycosyltransferase family 28 C-terminal domain
CFVI03293_RS04545	PF03033	Glycosyltransferase family 28 N-terminal domain
CFVI03293_RS04550	PF01098	Cell cycle protein
CFVI03293_RS04555	PF18644	Phage integrase SAM-like domain
CFVI03293_RS04555	PF00589	Phage integrase family
CFVI03293_RS04560	PF00764	Arginosuccinate synthase
CFVI03293_RS04565	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS04570	PF00072	Response regulator receiver domain
CFVI03293_RS04570	PF00486	Transcriptional regulatory protein, C terminal
CFVI03293_RS04580	PF08525	Opacity-associated protein A N-terminal motif
CFVI03293_RS04580	PF01551	Peptidase family M23
CFVI03293_RS04580	PF01476	LysM domain
CFVI03293_RS04615	PF00403	Heavy-metal-associated domain
CFVI03293_RS04635	PF02086	D12 class N6 adenine-specific DNA methyltransferase
CFVI03293_RS04640	PF02092	Glycyl-tRNA synthetase beta subunit
CFVI03293_RS04655	PF00588	SpoU rRNA Methylase family
CFVI03293_RS04660	PF00551	Formyl transferase
CFVI03293_RS04660	PF01842	ACT domain
CFVI03293_RS04665	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
CFVI03293_RS04665	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
CFVI03293_RS04670	PF09335	SNARE associated Golgi protein
CFVI03293_RS04680	PF00132	Bacterial transferase hexapeptide (six repeats)
CFVI03293_RS04680	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
CFVI03293_RS04685	PF10369	Small subunit of acetolactate synthase
CFVI03293_RS04690	PF00205	Thiamine pyrophosphate enzyme, central domain
CFVI03293_RS04690	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
CFVI03293_RS04690	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
CFVI03293_RS04700	PF02107	Flagellar L-ring protein
CFVI03293_RS04705	PF01515	Phosphate acetyl/butaryl transferase
CFVI03293_RS04710	PF00871	Acetokinase family
CFVI03293_RS04715	PF02875	Mur ligase family, glutamate ligase domain
CFVI03293_RS04715	PF08245	Mur ligase middle domain
CFVI03293_RS04730	PF01820	D-ala D-ala ligase N-terminus
CFVI03293_RS04730	PF07478	D-ala D-ala ligase C-terminus
CFVI03293_RS04735	PF07499	RuvA, C-terminal domain
CFVI03293_RS04735	PF01330	RuvA N terminal domain
CFVI03293_RS04745	PF00072	Response regulator receiver domain
CFVI03293_RS04745	PF01339	CheB methylesterase
CFVI03293_RS04750	PF01739	CheR methyltransferase, SAM binding domain
CFVI03293_RS04765	PF04055	Radical SAM superfamily
CFVI03293_RS04790	PF01588	Putative tRNA binding domain
CFVI03293_RS04790	PF00133	tRNA synthetases class I (I, L, M and V)
CFVI03293_RS04790	PF09334	tRNA synthetases class I (M)
CFVI03293_RS04800	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
CFVI03293_RS04815	PF00271	Helicase conserved C-terminal domain
CFVI03293_RS04815	PF00270	DEAD/DEAH box helicase
CFVI03293_RS04820	PF03023	Lipid II flippase MurJ
CFVI03293_RS04825	PF01406	tRNA synthetases class I (C) catalytic domain
CFVI03293_RS04825	PF09190	DALR domain
CFVI03293_RS04830	PF00664	ABC transporter transmembrane region
CFVI03293_RS04830	PF00005	ABC transporter
CFVI03293_RS04835	PF01180	Dihydroorotate dehydrogenase
CFVI03293_RS04840	PF05193	Peptidase M16 inactive domain
CFVI03293_RS04840	PF00675	Insulinase (Peptidase family M16)
CFVI03293_RS04845	PF00701	Dihydrodipicolinate synthetase family
CFVI03293_RS04855	PF01066	CDP-alcohol phosphatidyltransferase
CFVI03293_RS04860	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFVI03293_RS04865	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS04870	PF00005	ABC transporter
CFVI03293_RS04875	PF00892	EamA-like transporter family
CFVI03293_RS04885	PF00933	Glycosyl hydrolase family 3 N terminal domain
CFVI03293_RS04890	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
CFVI03293_RS04890	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CFVI03293_RS04895	PF02637	GatB domain
CFVI03293_RS04895	PF02934	GatB/GatE catalytic domain
CFVI03293_RS04900	PF02581	Thiamine monophosphate synthase
CFVI03293_RS04910	PF00119	ATP synthase A chain
CFVI03293_RS04915	PF01925	Sulfite exporter TauE/SafE
CFVI03293_RS04925	PF03471	Transporter associated domain
CFVI03293_RS04925	PF00999	Sodium/hydrogen exchanger family
CFVI03293_RS04925	PF02080	TrkA-C domain
CFVI03293_RS04930	PF00999	Sodium/hydrogen exchanger family
CFVI03293_RS04930	PF02254	TrkA-N domain
CFVI03293_RS04945	PF00710	Asparaginase, N-terminal
CFVI03293_RS04945	PF17763	Glutaminase/Asparaginase C-terminal domain
CFVI03293_RS04950	PF02646	RmuC family
CFVI03293_RS04960	PF03831	PhnA domain
CFVI03293_RS04960	PF08274	PhnA Zinc-Ribbon 
CFVI03293_RS04965	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CFVI03293_RS04965	PF01411	tRNA synthetases class II (A)
CFVI03293_RS04965	PF02272	DHHA1 domain
CFVI03293_RS04975	PF02545	Maf-like protein
CFVI03293_RS04980	PF17092	Penicillin-binding protein OB-like domain
CFVI03293_RS04980	PF00912	Transglycosylase
CFVI03293_RS04980	PF00905	Penicillin binding protein transpeptidase domain
CFVI03293_RS04990	PF01245	Ribosomal protein L19
CFVI03293_RS04995	PF01746	tRNA (Guanine-1)-methyltransferase
CFVI03293_RS05000	PF05239	PRC-barrel domain
CFVI03293_RS05000	PF01782	RimM N-terminal domain
CFVI03293_RS05010	PF00886	Ribosomal protein S16
CFVI03293_RS05015	PF02978	Signal peptide binding domain
CFVI03293_RS05015	PF00448	SRP54-type protein, GTPase domain
CFVI03293_RS05015	PF02881	SRP54-type protein, helical bundle domain
CFVI03293_RS05020	PF00939	Sodium:sulfate symporter transmembrane region
CFVI03293_RS05025	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS05025	PF00672	HAMP domain
CFVI03293_RS05030	PF00849	RNA pseudouridylate synthase
CFVI03293_RS05035	PF02390	Putative methyltransferase 
CFVI03293_RS05035	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
CFVI03293_RS05045	PF01784	NIF3 (NGG1p interacting factor 3)
CFVI03293_RS05050	PF02091	Glycyl-tRNA synthetase alpha subunit
CFVI03293_RS05060	PF00731	AIR carboxylase
CFVI03293_RS05065	PF01136	Peptidase family U32
CFVI03293_RS05080	PF02811	PHP domain
CFVI03293_RS05085	PF03951	Glutamine synthetase, beta-Grasp domain
CFVI03293_RS05085	PF00120	Glutamine synthetase, catalytic domain
CFVI03293_RS05095	PF00023	Ankyrin repeat
CFVI03293_RS05095	PF12796	Ankyrin repeats (3 copies)
CFVI03293_RS05100	PF00199	Catalase
CFVI03293_RS05100	PF06628	Catalase-related immune-responsive
CFVI03293_RS05110	PF00004	ATPase family associated with various cellular activities (AAA)
CFVI03293_RS05110	PF05362	Lon protease (S16) C-terminal proteolytic domain
CFVI03293_RS05110	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
CFVI03293_RS05115	PF13525	Outer membrane lipoprotein
CFVI03293_RS05120	PF01614	Bacterial transcriptional regulator
CFVI03293_RS05120	PF09339	IclR helix-turn-helix domain
CFVI03293_RS05125	PF00701	Dihydrodipicolinate synthetase family
CFVI03293_RS05130	PF08666	SAF domain
CFVI03293_RS05130	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
CFVI03293_RS05140	PF07690	Major Facilitator Superfamily
CFVI03293_RS05150	PF02623	FliW protein
CFVI03293_RS05170	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
CFVI03293_RS05170	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
CFVI03293_RS05180	PF08003	Protein of unknown function (DUF1698)
CFVI03293_RS05185	PF03061	Thioesterase superfamily
CFVI03293_RS05185	PF01008	Initiation factor 2 subunit family
CFVI03293_RS05190	PF00753	Metallo-beta-lactamase superfamily
CFVI03293_RS05195	PF02540	NAD synthase
CFVI03293_RS05200	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CFVI03293_RS05205	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
CFVI03293_RS05210	PF00696	Amino acid kinase family
CFVI03293_RS05215	PF00291	Pyridoxal-phosphate dependent enzyme
CFVI03293_RS05220	PF02348	Cytidylyltransferase
CFVI03293_RS05230	PF00990	Diguanylate cyclase, GGDEF domain
CFVI03293_RS05235	PF00990	Diguanylate cyclase, GGDEF domain
CFVI03293_RS05235	PF00072	Response regulator receiver domain
CFVI03293_RS05240	PF11412	Disulphide bond corrector protein DsbC
CFVI03293_RS05240	PF00085	Thioredoxin
CFVI03293_RS05240	PF02683	Cytochrome C biogenesis protein transmembrane region
CFVI03293_RS05440	PF13401	AAA domain
CFVI03293_RS05440	PF09077	Mu B transposition protein, C terminal 
CFVI03293_RS05460	PF03976	Polyphosphate kinase 2 (PPK2)
CFVI03293_RS05465	PF00012	Hsp70 protein
CFVI03293_RS05470	PF01025	GrpE
CFVI03293_RS05500	PF00771	FHIPEP family
CFVI03293_RS05505	PF02082	Transcriptional regulator
CFVI03293_RS05510	PF00312	Ribosomal protein S15
CFVI03293_RS05515	PF00425	chorismate binding enzyme
CFVI03293_RS05520	PF01063	Amino-transferase class IV
CFVI03293_RS05530	PF08402	TOBE domain
CFVI03293_RS05530	PF00005	ABC transporter
CFVI03293_RS05560	PF13847	Methyltransferase domain
CFVI03293_RS05565	PF06574	FAD synthetase
CFVI03293_RS05565	PF01687	Riboflavin kinase
CFVI03293_RS05575	PF01653	NAD-dependent DNA ligase adenylation domain
CFVI03293_RS05575	PF03120	NAD-dependent DNA ligase OB-fold domain
CFVI03293_RS05575	PF12826	Helix-hairpin-helix motif
CFVI03293_RS05575	PF00533	BRCA1 C Terminus (BRCT) domain
CFVI03293_RS05580	PF00809	Pterin binding enzyme
CFVI03293_RS05585	PF09115	DNA polymerase III, delta subunit, C terminal
CFVI03293_RS05595	PF00696	Amino acid kinase family
CFVI03293_RS05595	PF01842	ACT domain
CFVI03293_RS05595	PF13840	ACT domain 
CFVI03293_RS05600	PF00293	NUDIX domain
CFVI03293_RS05605	PF06969	HemN C-terminal domain
CFVI03293_RS05605	PF04055	Radical SAM superfamily
CFVI03293_RS05610	PF02416	mttA/Hcf106 family
CFVI03293_RS05615	PF00902	Sec-independent protein translocase protein (TatC)
CFVI03293_RS05620	PF02547	Queuosine biosynthesis protein
CFVI03293_RS05630	PF01189	16S rRNA methyltransferase RsmB/F
CFVI03293_RS05630	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
CFVI03293_RS05630	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
CFVI03293_RS05635	PF03652	Holliday junction resolvase
CFVI03293_RS05640	PF18255	DNA processing protein A sterile alpha motif domain
CFVI03293_RS05640	PF02481	DNA recombination-mediator protein A
CFVI03293_RS05645	PF04748	Divergent polysaccharide deacetylase
CFVI03293_RS05650	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
CFVI03293_RS05650	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
CFVI03293_RS05660	PF00773	RNB domain
CFVI03293_RS05670	PF01250	Ribosomal protein S6
CFVI03293_RS05675	PF00436	Single-strand binding protein family
CFVI03293_RS05680	PF01084	Ribosomal protein S18
CFVI03293_RS05685	PF00226	DnaJ domain
CFVI03293_RS05685	PF01556	DnaJ C terminal domain
CFVI03293_RS05685	PF00684	DnaJ central domain
CFVI03293_RS05690	PF00072	Response regulator receiver domain
CFVI03293_RS05690	PF00486	Transcriptional regulatory protein, C terminal
CFVI03293_RS05700	PF13662	Toprim domain
CFVI03293_RS05700	PF02132	RecR protein
CFVI03293_RS05705	PF08501	Shikimate dehydrogenase substrate binding domain
CFVI03293_RS05720	PF00464	Serine hydroxymethyltransferase
CFVI03293_RS05725	PF01336	OB-fold nucleic acid binding domain
CFVI03293_RS05725	PF00152	tRNA synthetases class II (D, K and N) 
CFVI03293_RS05730	PF01475	Ferric uptake regulator family
CFVI03293_RS05740	PF00437	Type II/IV secretion system protein
CFVI03293_RS05745	PF02686	Glu-tRNAGln amidotransferase C subunit
CFVI03293_RS05755	PF15437	Plasminogen-binding protein pgbA C-terminal
CFVI03293_RS05765	PF03309	Type III pantothenate kinase
CFVI03293_RS05770	PF01634	ATP phosphoribosyltransferase
CFVI03293_RS05775	PF05525	Branched-chain amino acid transport protein
CFVI03293_RS05780	PF00149	Calcineurin-like phosphoesterase
CFVI03293_RS05785	PF02666	Phosphatidylserine decarboxylase
CFVI03293_RS05805	PF03892	Nitrate reductase cytochrome c-type subunit (NapB)
CFVI03293_RS05810	PF12801	4Fe-4S binding domain
CFVI03293_RS05810	PF12837	4Fe-4S binding domain
CFVI03293_RS05815	PF12838	4Fe-4S dicluster domain
CFVI03293_RS05815	PF12800	4Fe-4S binding domain
CFVI03293_RS05820	PF00384	Molybdopterin oxidoreductase
CFVI03293_RS05820	PF01568	Molydopterin dinucleotide binding domain
CFVI03293_RS05820	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CFVI03293_RS05825	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS05830	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS05835	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFVI03293_RS05840	PF00005	ABC transporter
CFVI03293_RS05845	PF01926	50S ribosome-binding GTPase
CFVI03293_RS05845	PF06071	Protein of unknown function (DUF933)
CFVI03293_RS05850	PF00883	Cytosol aminopeptidase family, catalytic domain
CFVI03293_RS05860	PF00156	Phosphoribosyl transferase domain
CFVI03293_RS05870	PF02502	Ribose/Galactose Isomerase
CFVI03293_RS05875	PF02163	Peptidase family M50
CFVI03293_RS05880	PF10502	Signal peptidase, peptidase S26 
CFVI03293_RS05885	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
CFVI03293_RS05885	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
CFVI03293_RS05895	PF00202	Aminotransferase class-III
CFVI03293_RS05920	PF01312	FlhB HrpN YscU SpaS Family
CFVI03293_RS05925	PF00905	Penicillin binding protein transpeptidase domain
CFVI03293_RS05925	PF03717	Penicillin-binding Protein dimerisation domain
CFVI03293_RS05940	PF01926	50S ribosome-binding GTPase
CFVI03293_RS05960	PF00475	Imidazoleglycerol-phosphate dehydratase
CFVI03293_RS05965	PF03330	Lytic transglycolase
CFVI03293_RS05965	PF05036	Sporulation related domain
CFVI03293_RS05970	PF01476	LysM domain
CFVI03293_RS05970	PF00877	NlpC/P60 family
CFVI03293_RS05975	PF01026	TatD related DNase
CFVI03293_RS05980	PF00990	Diguanylate cyclase, GGDEF domain
CFVI03293_RS05980	PF00072	Response regulator receiver domain
CFVI03293_RS05985	PF13476	AAA domain
CFVI03293_RS05990	PF01513	ATP-NAD kinase
CFVI03293_RS05995	PF01336	OB-fold nucleic acid binding domain
CFVI03293_RS05995	PF00152	tRNA synthetases class II (D, K and N) 
CFVI03293_RS05995	PF02938	GAD domain
CFVI03293_RS06005	PF00719	Inorganic pyrophosphatase
CFVI03293_RS06010	PF13302	Acetyltransferase (GNAT) domain
CFVI03293_RS06010	PF00117	Glutamine amidotransferase class-I
CFVI03293_RS06010	PF00958	GMP synthase C terminal domain
CFVI03293_RS06010	PF13673	Acetyltransferase (GNAT) domain
CFVI03293_RS06010	PF03352	Methyladenine glycosylase
CFVI03293_RS06020	PF00005	ABC transporter
CFVI03293_RS06025	PF01032	FecCD transport family
CFVI03293_RS06030	PF01497	Periplasmic binding protein
CFVI03293_RS06045	PF07715	TonB-dependent Receptor Plug Domain
CFVI03293_RS06045	PF00593	TonB dependent receptor
CFVI03293_RS06055	PF05430	S-adenosyl-L-methionine-dependent methyltransferase
CFVI03293_RS06055	PF01266	FAD dependent oxidoreductase
CFVI03293_RS06060	PF01520	N-acetylmuramoyl-L-alanine amidase
CFVI03293_RS06065	PF00478	IMP dehydrogenase / GMP reductase domain
CFVI03293_RS06070	PF00579	tRNA synthetases class I (W and Y)
CFVI03293_RS06075	PF13291	ACT domain
CFVI03293_RS06075	PF02824	TGS domain
CFVI03293_RS06075	PF04607	Region found in RelA / SpoT proteins
CFVI03293_RS06080	PF01192	RNA polymerase Rpb6 
CFVI03293_RS06085	PF00696	Amino acid kinase family
CFVI03293_RS06100	PF00005	ABC transporter
CFVI03293_RS06100	PF09383	NIL domain
CFVI03293_RS06105	PF02390	Putative methyltransferase 
CFVI03293_RS06115	PF00849	RNA pseudouridylate synthase
CFVI03293_RS06115	PF01479	S4 domain
CFVI03293_RS06120	PF01098	Cell cycle protein
CFVI03293_RS06125	PF02630	SCO1/SenC
CFVI03293_RS06130	PF13426	PAS domain
CFVI03293_RS06130	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS06130	PF00672	HAMP domain
CFVI03293_RS06135	PF01638	HxlR-like helix-turn-helix
CFVI03293_RS06140	PF13460	NAD(P)H-binding 
CFVI03293_RS06150	PF08447	PAS fold
CFVI03293_RS06150	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS06150	PF13426	PAS domain
CFVI03293_RS06195	PF13651	Adenine-specific methyltransferase EcoRI
CFVI03293_RS06250	PF12728	Helix-turn-helix domain
CFVI03293_RS06250	PF02661	Fic/DOC family
CFVI03293_RS06265	PF13614	AAA domain
CFVI03293_RS06305	PF01464	Transglycosylase SLT domain
CFVI03293_RS06315	PF01751	Toprim domain
CFVI03293_RS06315	PF01131	DNA topoisomerase
CFVI03293_RS06345	PF02534	Type IV secretory system Conjugative DNA transfer
CFVI03293_RS06350	PF00437	Type II/IV secretion system protein
CFVI03293_RS06355	PF03743	Bacterial conjugation TrbI-like protein 
CFVI03293_RS06360	PF03524	Conjugal transfer protein
CFVI03293_RS06375	PF04335	VirB8 protein
CFVI03293_RS06400	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
CFVI03293_RS06410	PF13356	Arm DNA-binding domain
CFVI03293_RS06410	PF00589	Phage integrase family
CFVI03293_RS06425	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS06430	PF00005	ABC transporter
CFVI03293_RS06435	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFVI03293_RS06440	PF00497	Bacterial extracellular solute-binding proteins, family 3
CFVI03293_RS06445	PF02581	Thiamine monophosphate synthase
CFVI03293_RS06450	PF02673	Bacitracin resistance protein BacA
CFVI03293_RS06455	PF00266	Aminotransferase class-V
CFVI03293_RS06465	PF00512	His Kinase A (phospho-acceptor) domain
CFVI03293_RS06465	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS06470	PF02811	PHP domain
CFVI03293_RS06470	PF14579	Helix-hairpin-helix motif
CFVI03293_RS06470	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
CFVI03293_RS06470	PF07733	Bacterial DNA polymerase III alpha NTPase domain
CFVI03293_RS06475	PF00076	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
CFVI03293_RS06480	PF14850	DNA-binding domain of Proline dehydrogenase
CFVI03293_RS06480	PF00171	Aldehyde dehydrogenase family
CFVI03293_RS06480	PF01619	Proline dehydrogenase
CFVI03293_RS06480	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
CFVI03293_RS06485	PF00474	Sodium:solute symporter family
CFVI03293_RS06490	PF03264	NapC/NirT cytochrome c family, N-terminal region
CFVI03293_RS06495	PF02335	Cytochrome c552
CFVI03293_RS06500	PF01965	DJ-1/PfpI family
CFVI03293_RS06505	PF09285	Elongation factor P, C-terminal
CFVI03293_RS06505	PF08207	Elongation factor P (EF-P) KOW-like domain
CFVI03293_RS06505	PF01132	Elongation factor P (EF-P) OB domain
CFVI03293_RS06510	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CFVI03293_RS06510	PF01842	ACT domain
CFVI03293_RS06510	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CFVI03293_RS06520	PF00575	S1 RNA binding domain
CFVI03293_RS06525	PF02401	LytB protein
CFVI03293_RS06530	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
CFVI03293_RS06535	PF03147	Ferredoxin-fold anticodon binding domain
CFVI03293_RS06535	PF03484	tRNA synthetase B5 domain
CFVI03293_RS06535	PF03483	B3/4 domain
CFVI03293_RS06535	PF01588	Putative tRNA binding domain
CFVI03293_RS06535	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
CFVI03293_RS06540	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
CFVI03293_RS06540	PF01409	tRNA synthetases class II core domain (F)
CFVI03293_RS06545	PF01230	HIT domain
CFVI03293_RS06555	PF03725	3' exoribonuclease family, domain 2
CFVI03293_RS06555	PF01138	3' exoribonuclease family, domain 1
CFVI03293_RS06555	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
CFVI03293_RS06555	PF00013	KH domain
CFVI03293_RS06555	PF00575	S1 RNA binding domain
CFVI03293_RS06575	PF02843	Phosphoribosylglycinamide synthetase, C domain
CFVI03293_RS06575	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
CFVI03293_RS06575	PF02844	Phosphoribosylglycinamide synthetase, N domain
CFVI03293_RS06590	PF02540	NAD synthase
CFVI03293_RS06590	PF00958	GMP synthase C terminal domain
CFVI03293_RS06590	PF00117	Glutamine amidotransferase class-I
CFVI03293_RS06600	PF02151	UvrB/uvrC motif
CFVI03293_RS06600	PF01541	GIY-YIG catalytic domain
CFVI03293_RS06600	PF08459	UvrC Helix-hairpin-helix N-terminal
CFVI03293_RS06610	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
CFVI03293_RS06610	PF01627	Hpt domain
CFVI03293_RS06610	PF00512	His Kinase A (phospho-acceptor) domain
CFVI03293_RS06610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS06610	PF00672	HAMP domain
CFVI03293_RS06610	PF00072	Response regulator receiver domain
CFVI03293_RS06615	PF00072	Response regulator receiver domain
CFVI03293_RS06615	PF01339	CheB methylesterase
CFVI03293_RS06620	PF01243	Pyridoxamine 5'-phosphate oxidase
CFVI03293_RS06655	PF00474	Sodium:solute symporter family
CFVI03293_RS06660	PF03061	Thioesterase superfamily
CFVI03293_RS06665	PF01641	SelR domain
CFVI03293_RS06665	PF01625	Peptide methionine sulfoxide reductase
CFVI03293_RS06675	PF00137	ATP synthase subunit C
CFVI03293_RS06685	PF02694	Uncharacterised BCR, YnfA/UPF0060 family
CFVI03293_RS06695	PF06719	AraC-type transcriptional regulator N-terminus
CFVI03293_RS06695	PF12833	Helix-turn-helix domain
CFVI03293_RS06700	PF00465	Iron-containing alcohol dehydrogenase 
CFVI03293_RS06705	PF12833	Helix-turn-helix domain
CFVI03293_RS06725	PF00209	Sodium:neurotransmitter symporter family
CFVI03293_RS06730	PF00364	Biotin-requiring enzyme
CFVI03293_RS06730	PF02436	Conserved carboxylase domain
CFVI03293_RS06730	PF00682	HMGL-like
CFVI03293_RS06735	PF01293	Phosphoenolpyruvate carboxykinase
CFVI03293_RS06740	PF14698	Argininosuccinate lyase C-terminal
CFVI03293_RS06740	PF00206	Lyase
CFVI03293_RS06750	PF07670	Nucleoside recognition
CFVI03293_RS06750	PF07664	Ferrous iron transport protein B C terminus
CFVI03293_RS06750	PF02421	Ferrous iron transport protein B
CFVI03293_RS06755	PF02525	Flavodoxin-like fold
CFVI03293_RS06770	PF07732	Multicopper oxidase
CFVI03293_RS06770	PF07731	Multicopper oxidase
CFVI03293_RS06790	PF03144	Elongation factor Tu domain 2
CFVI03293_RS06790	PF03764	Elongation factor G, domain IV
CFVI03293_RS06790	PF14492	Elongation Factor G, domain II
CFVI03293_RS06790	PF00679	Elongation factor G C-terminus
CFVI03293_RS06790	PF00009	Elongation factor Tu GTP binding domain
CFVI03293_RS06795	PF00177	Ribosomal protein S7p/S5e
CFVI03293_RS06800	PF00164	Ribosomal protein S12/S23
CFVI03293_RS06805	PF00623	RNA polymerase Rpb1, domain 2
CFVI03293_RS06805	PF04983	RNA polymerase Rpb1, domain 3
CFVI03293_RS06805	PF04998	RNA polymerase Rpb1, domain 5
CFVI03293_RS06805	PF04997	RNA polymerase Rpb1, domain 1
CFVI03293_RS06805	PF05000	RNA polymerase Rpb1, domain 4
CFVI03293_RS06810	PF10385	RNA polymerase beta subunit external 1 domain
CFVI03293_RS06810	PF04565	RNA polymerase Rpb2, domain 3
CFVI03293_RS06810	PF00562	RNA polymerase Rpb2, domain 6
CFVI03293_RS06810	PF04563	RNA polymerase beta subunit
CFVI03293_RS06810	PF04560	RNA polymerase Rpb2, domain 7
CFVI03293_RS06810	PF04561	RNA polymerase Rpb2, domain 2
CFVI03293_RS06815	PF00542	Ribosomal protein L7/L12 C-terminal domain
CFVI03293_RS06815	PF16320	Ribosomal protein L7/L12 dimerisation domain
CFVI03293_RS06820	PF00466	Ribosomal protein L10
CFVI03293_RS06825	PF00687	Ribosomal protein L1p/L10e family
CFVI03293_RS06830	PF00298	Ribosomal protein L11, RNA binding domain
CFVI03293_RS06830	PF03946	Ribosomal protein L11, N-terminal domain
CFVI03293_RS06835	PF02357	Transcription termination factor nusG
CFVI03293_RS06850	PF00471	Ribosomal protein L33
CFVI03293_RS06855	PF00009	Elongation factor Tu GTP binding domain
CFVI03293_RS06855	PF03144	Elongation factor Tu domain 2
CFVI03293_RS06855	PF03143	Elongation factor Tu C-terminal domain
CFVI03293_RS06880	PF00080	Copper/zinc superoxide dismutase (SODC)
CFVI03293_RS06890	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
CFVI03293_RS06895	PF01029	NusB family
CFVI03293_RS06900	PF00885	6,7-dimethyl-8-ribityllumazine synthase
CFVI03293_RS06905	PF00893	Small Multidrug Resistance protein
CFVI03293_RS06915	PF00793	DAHP synthetase I family
CFVI03293_RS06920	PF00892	EamA-like transporter family
CFVI03293_RS06925	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
CFVI03293_RS06925	PF01926	50S ribosome-binding GTPase
CFVI03293_RS06930	PF01202	Shikimate kinase
CFVI03293_RS06935	PF00579	tRNA synthetases class I (W and Y)
CFVI03293_RS06940	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CFVI03293_RS06940	PF02403	Seryl-tRNA synthetase N-terminal domain
CFVI03293_RS06950	PF08502	LeuA allosteric (dimerisation) domain
CFVI03293_RS06950	PF00682	HMGL-like
CFVI03293_RS06955	PF01066	CDP-alcohol phosphatidyltransferase
CFVI03293_RS06960	PF02666	Phosphatidylserine decarboxylase
CFVI03293_RS06965	PF01434	Peptidase family M41
CFVI03293_RS06965	PF17862	AAA+ lid domain
CFVI03293_RS06965	PF00004	ATPase family associated with various cellular activities (AAA)
CFVI03293_RS06975	PF00072	Response regulator receiver domain
CFVI03293_RS06980	PF00977	Histidine biosynthesis protein
CFVI03293_RS06985	PF00117	Glutamine amidotransferase class-I
CFVI03293_RS06995	PF02719	Polysaccharide biosynthesis protein
CFVI03293_RS07000	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CFVI03293_RS07005	PF02525	Flavodoxin-like fold
CFVI03293_RS07015	PF08245	Mur ligase middle domain
CFVI03293_RS07020	PF00953	Glycosyl transferase family 4
CFVI03293_RS07020	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
CFVI03293_RS07025	PF01676	Metalloenzyme superfamily
CFVI03293_RS07025	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
CFVI03293_RS07035	PF00550	Phosphopantetheine attachment site
CFVI03293_RS07040	PF02801	Beta-ketoacyl synthase, C-terminal domain
CFVI03293_RS07040	PF00109	Beta-ketoacyl synthase, N-terminal domain
CFVI03293_RS07045	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
CFVI03293_RS07055	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
CFVI03293_RS07055	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFVI03293_RS07065	PF00472	RF-1 domain
CFVI03293_RS07065	PF03462	PCRF domain
CFVI03293_RS07070	PF02569	Pantoate-beta-alanine ligase
CFVI03293_RS07075	PF00919	Uncharacterized protein family UPF0004
CFVI03293_RS07075	PF18693	TRAM domain
CFVI03293_RS07075	PF04055	Radical SAM superfamily
CFVI03293_RS07080	PF01171	PP-loop family
CFVI03293_RS07100	PF04028	Domain of unknown function (DUF374)
CFVI03293_RS07105	PF01938	TRAM domain
CFVI03293_RS07105	PF04055	Radical SAM superfamily
CFVI03293_RS07105	PF00919	Uncharacterized protein family UPF0004
CFVI03293_RS07115	PF13184	NusA-like KH domain
CFVI03293_RS07115	PF08529	NusA N-terminal domain
CFVI03293_RS07120	PF14602	Hexapeptide repeat of succinyl-transferase
CFVI03293_RS07120	PF12464	Maltose acetyltransferase 
CFVI03293_RS07120	PF00132	Bacterial transferase hexapeptide (six repeats)
CFVI03293_RS07125	PF02397	Bacterial sugar transferase
CFVI03293_RS07130	PF00534	Glycosyl transferases group 1
CFVI03293_RS07130	PF13477	Glycosyl transferase 4-like
CFVI03293_RS07135	PF18527	STT3/PglB C-terminal beta-barrel domain
CFVI03293_RS07135	PF02516	Oligosaccharyl transferase STT3 subunit
CFVI03293_RS07140	PF00534	Glycosyl transferases group 1
CFVI03293_RS07140	PF13439	Glycosyltransferase Family 4
CFVI03293_RS07145	PF13439	Glycosyltransferase Family 4
CFVI03293_RS07145	PF00534	Glycosyl transferases group 1
CFVI03293_RS07150	PF00534	Glycosyl transferases group 1
CFVI03293_RS07150	PF13439	Glycosyltransferase Family 4
CFVI03293_RS07155	PF01943	Polysaccharide biosynthesis protein
CFVI03293_RS07155	PF14667	Polysaccharide biosynthesis C-terminal domain
CFVI03293_RS07160	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CFVI03293_RS07160	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CFVI03293_RS07160	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CFVI03293_RS07165	PF00535	Glycosyl transferase family 2
CFVI03293_RS07175	PF04138	GtrA-like protein
CFVI03293_RS07180	PF01370	NAD dependent epimerase/dehydratase family
CFVI03293_RS07195	PF14743	DNA ligase OB-like domain
CFVI03293_RS07195	PF01068	ATP dependent DNA ligase domain
CFVI03293_RS07200	PF01370	NAD dependent epimerase/dehydratase family
CFVI03293_RS07205	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
CFVI03293_RS07205	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
CFVI03293_RS07205	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
CFVI03293_RS07225	PF00535	Glycosyl transferase family 2
CFVI03293_RS07230	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
CFVI03293_RS07235	PF01522	Polysaccharide deacetylase
CFVI03293_RS07250	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
CFVI03293_RS07255	PF13439	Glycosyltransferase Family 4
CFVI03293_RS07255	PF00534	Glycosyl transferases group 1
CFVI03293_RS07260	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
CFVI03293_RS07275	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
CFVI03293_RS07280	PF13580	SIS domain
CFVI03293_RS07285	PF01177	Asp/Glu/Hydantoin racemase
CFVI03293_RS07290	PF00294	pfkB family carbohydrate kinase
CFVI03293_RS07290	PF01467	Cytidylyltransferase-like
CFVI03293_RS07295	PF01370	NAD dependent epimerase/dehydratase family
CFVI03293_RS07300	PF08645	Polynucleotide kinase 3 phosphatase
CFVI03293_RS07315	PF12951	Passenger-associated-transport-repeat
CFVI03293_RS07315	PF00082	Subtilase family
CFVI03293_RS07315	PF03797	Autotransporter beta-domain
CFVI03293_RS07330	PF00403	Heavy-metal-associated domain
CFVI03293_RS07335	PF07498	Rho termination factor, N-terminal domain
CFVI03293_RS07335	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CFVI03293_RS07335	PF07497	Rho termination factor, RNA-binding domain
CFVI03293_RS07340	PF12169	DNA polymerase III subunits gamma and tau domain III
CFVI03293_RS07340	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
CFVI03293_RS07340	PF12170	DNA polymerase III tau subunit V interacting with alpha
CFVI03293_RS07365	PF00121	Triosephosphate isomerase
CFVI03293_RS07370	PF00162	Phosphoglycerate kinase
CFVI03293_RS07375	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CFVI03293_RS07375	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
CFVI03293_RS07380	PF01467	Cytidylyltransferase-like
CFVI03293_RS07390	PF03601	Conserved hypothetical protein 698
CFVI03293_RS07395	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
CFVI03293_RS07395	PF03466	LysR substrate binding domain
CFVI03293_RS07400	PF03485	Arginyl tRNA synthetase N terminal domain
CFVI03293_RS07400	PF05746	DALR anticodon binding domain
CFVI03293_RS07400	PF00750	tRNA synthetases class I (R)
CFVI03293_RS07405	PF02416	mttA/Hcf106 family
CFVI03293_RS07410	PF00625	Guanylate kinase
CFVI03293_RS07420	PF01311	Bacterial export proteins, family 1
CFVI03293_RS07425	PF07715	TonB-dependent Receptor Plug Domain
CFVI03293_RS07425	PF00593	TonB dependent receptor
CFVI03293_RS07430	PF00005	ABC transporter
CFVI03293_RS07435	PF00889	Elongation factor TS
CFVI03293_RS07440	PF00318	Ribosomal protein S2
CFVI03293_RS07450	PF02578	Multi-copper polyphenol oxidoreductase laccase
CFVI03293_RS07455	PF00677	Lumazine binding domain
CFVI03293_RS07460	PF01134	Glucose inhibited division protein A
CFVI03293_RS07460	PF13932	GidA associated domain
CFVI03293_RS07465	PF00355	Rieske [2Fe-2S] domain
CFVI03293_RS07465	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
CFVI03293_RS07470	PF00032	Cytochrome b(C-terminal)/b6/petD
CFVI03293_RS07470	PF00033	Cytochrome b/b6/petB
CFVI03293_RS07500	PF04055	Radical SAM superfamily
CFVI03293_RS07505	PF01208	Uroporphyrinogen decarboxylase (URO-D)
CFVI03293_RS07515	PF02774	Semialdehyde dehydrogenase, dimerisation domain
CFVI03293_RS07515	PF01118	Semialdehyde dehydrogenase, NAD binding domain
CFVI03293_RS07520	PF00158	Sigma-54 interaction domain
CFVI03293_RS07520	PF00072	Response regulator receiver domain
CFVI03293_RS07535	PF00521	DNA gyrase/topoisomerase IV, subunit A
CFVI03293_RS07535	PF03989	DNA gyrase C-terminal domain, beta-propeller
CFVI03293_RS07555	PF13193	AMP-binding enzyme C-terminal domain
CFVI03293_RS07555	PF00501	AMP-binding enzyme
CFVI03293_RS07580	PF01361	Tautomerase enzyme
CFVI03293_RS07585	PF06421	GTP-binding protein LepA C-terminus
CFVI03293_RS07585	PF03144	Elongation factor Tu domain 2
CFVI03293_RS07585	PF00009	Elongation factor Tu GTP binding domain
CFVI03293_RS07585	PF00679	Elongation factor G C-terminus
CFVI03293_RS07590	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
CFVI03293_RS07590	PF14572	Phosphoribosyl synthetase-associated domain
CFVI03293_RS07595	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CFVI03293_RS07595	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CFVI03293_RS07600	PF01979	Amidohydrolase family
CFVI03293_RS07610	PF08334	Type II secretion system (T2SS), protein G
CFVI03293_RS07610	PF07963	Prokaryotic N-terminal methylation motif
CFVI03293_RS07640	PF03641	Possible lysine decarboxylase
CFVI03293_RS07645	PF07992	Pyridine nucleotide-disulphide oxidoreductase
CFVI03293_RS07645	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CFVI03293_RS07650	PF01645	Conserved region in glutamate synthase
CFVI03293_RS07650	PF01493	GXGXG motif
CFVI03293_RS07650	PF04898	Glutamate synthase central domain
CFVI03293_RS07650	PF00310	Glutamine amidotransferases class-II
CFVI03293_RS07655	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
CFVI03293_RS07655	PF01872	RibD C-terminal domain
CFVI03293_RS07670	PF17384	RimP C-terminal SH3 domain
CFVI03293_RS07670	PF02576	RimP N-terminal domain
CFVI03293_RS07675	PF02033	Ribosome-binding factor A
CFVI03293_RS07680	PF04760	Translation initiation factor IF-2, N-terminal region
CFVI03293_RS07680	PF11987	Translation-initiation factor 2
CFVI03293_RS07680	PF00009	Elongation factor Tu GTP binding domain
CFVI03293_RS07690	PF00288	GHMP kinases N terminal domain
CFVI03293_RS07700	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
CFVI03293_RS07705	PF02567	Phenazine biosynthesis-like protein
CFVI03293_RS07715	PF01842	ACT domain
CFVI03293_RS07715	PF02153	Prephenate dehydrogenase
CFVI03293_RS07720	PF01103	Surface antigen
CFVI03293_RS07720	PF07244	Surface antigen variable number repeat
CFVI03293_RS07725	PF03473	MOSC domain
CFVI03293_RS07730	PF01343	Peptidase family S49
CFVI03293_RS07735	PF01979	Amidohydrolase family
CFVI03293_RS07740	PF01220	Dehydroquinase class II
CFVI03293_RS07745	PF01321	Creatinase/Prolidase N-terminal domain
CFVI03293_RS07745	PF00557	Metallopeptidase family M24
CFVI03293_RS07750	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
CFVI03293_RS07755	PF00448	SRP54-type protein, GTPase domain
CFVI03293_RS07760	PF10609	NUBPL iron-transfer P-loop NTPase
CFVI03293_RS07770	PF04542	Sigma-70 region 2 
CFVI03293_RS07770	PF04539	Sigma-70 region 3
CFVI03293_RS07770	PF04545	Sigma-70, region 4
CFVI03293_RS07775	PF02154	Flagellar motor switch protein FliM
CFVI03293_RS07775	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
CFVI03293_RS07780	PF04509	CheC-like family
CFVI03293_RS07780	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
CFVI03293_RS07785	PF01171	PP-loop family
CFVI03293_RS07790	PF01048	Phosphorylase superfamily
CFVI03293_RS07795	PF00698	Acyl transferase domain
CFVI03293_RS07800	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CFVI03293_RS07815	PF04052	TolB amino-terminal domain
CFVI03293_RS07825	PF02472	Biopolymer transport protein ExbD/TolR
CFVI03293_RS07830	PF01618	MotA/TolQ/ExbB proton channel family
CFVI03293_RS07835	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
CFVI03293_RS07840	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CFVI03293_RS07840	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CFVI03293_RS07845	PF00231	ATP synthase
CFVI03293_RS07850	PF02874	ATP synthase alpha/beta family, beta-barrel domain
CFVI03293_RS07850	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CFVI03293_RS07850	PF00306	ATP synthase alpha/beta chain, C terminal domain
CFVI03293_RS07855	PF00213	ATP synthase delta (OSCP) subunit
CFVI03293_RS07860	PF00430	ATP synthase B/B' CF(0)
CFVI03293_RS07865	PF00430	ATP synthase B/B' CF(0)
CFVI03293_RS07870	PF17762	HTH domain found in ParB protein
CFVI03293_RS07870	PF02195	ParB-like nuclease domain
CFVI03293_RS07875	PF13614	AAA domain
CFVI03293_RS07880	PF02237	Biotin protein ligase C terminal domain
CFVI03293_RS07880	PF03099	Biotin/lipoate A/B protein ligase family
CFVI03293_RS07880	PF08279	HTH domain
CFVI03293_RS07885	PF00551	Formyl transferase
CFVI03293_RS07885	PF02911	Formyl transferase, C-terminal domain
CFVI03293_RS07890	PF00696	Amino acid kinase family
CFVI03293_RS07895	PF01018	GTP1/OBG
CFVI03293_RS07895	PF01926	50S ribosome-binding GTPase
CFVI03293_RS07900	PF01016	Ribosomal L27 protein
CFVI03293_RS07905	PF00829	Ribosomal prokaryotic L21 protein
CFVI03293_RS07910	PF03150	Di-haem cytochrome c peroxidase
CFVI03293_RS07910	PF00034	Cytochrome c
CFVI03293_RS07930	PF02348	Cytidylyltransferase
CFVI03293_RS07940	PF09107	Elongation factor SelB, winged helix 
CFVI03293_RS07940	PF09105	Elongation factor SelB, winged helix 
CFVI03293_RS07940	PF03144	Elongation factor Tu domain 2
CFVI03293_RS07940	PF09106	Elongation factor SelB, winged helix 
CFVI03293_RS07940	PF00009	Elongation factor Tu GTP binding domain
CFVI03293_RS07945	PF03841	L-seryl-tRNA selenium transferase
CFVI03293_RS07965	PF00384	Molybdopterin oxidoreductase
CFVI03293_RS07965	PF01568	Molydopterin dinucleotide binding domain
CFVI03293_RS07965	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CFVI03293_RS07970	PF01568	Molydopterin dinucleotide binding domain
CFVI03293_RS07970	PF00384	Molybdopterin oxidoreductase
CFVI03293_RS07970	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
CFVI03293_RS07975	PF13247	4Fe-4S dicluster domain
CFVI03293_RS07980	PF03150	Di-haem cytochrome c peroxidase
CFVI03293_RS07980	PF00034	Cytochrome c
CFVI03293_RS07995	PF03102	NeuB family
CFVI03293_RS07995	PF08666	SAF domain
CFVI03293_RS08000	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CFVI03293_RS08000	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
CFVI03293_RS08005	PF02621	Menaquinone biosynthesis
CFVI03293_RS08015	PF01515	Phosphate acetyl/butaryl transferase
CFVI03293_RS08015	PF03949	Malic enzyme, NAD binding domain
CFVI03293_RS08015	PF00390	Malic enzyme, N-terminal domain
CFVI03293_RS08025	PF00749	tRNA synthetases class I (E and Q), catalytic domain
CFVI03293_RS08035	PF02785	Biotin carboxylase C-terminal domain
CFVI03293_RS08035	PF00289	Biotin carboxylase, N-terminal domain
CFVI03293_RS08035	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
CFVI03293_RS08040	PF00364	Biotin-requiring enzyme
CFVI03293_RS08045	PF00692	dUTPase
CFVI03293_RS08050	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CFVI03293_RS08060	PF14748	Pyrroline-5-carboxylate reductase dimerisation
CFVI03293_RS08060	PF03807	NADP oxidoreductase coenzyme F420-dependent
CFVI03293_RS08070	PF06969	HemN C-terminal domain
CFVI03293_RS08070	PF04055	Radical SAM superfamily
CFVI03293_RS08075	PF10788	Protein of unknown function (DUF2603)
CFVI03293_RS08080	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
CFVI03293_RS08080	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
CFVI03293_RS08085	PF00490	Delta-aminolevulinic acid dehydratase
CFVI03293_RS08090	PF00925	GTP cyclohydrolase II
CFVI03293_RS08095	PF02527	rRNA small subunit methyltransferase G
CFVI03293_RS08110	PF01435	Peptidase family M48
CFVI03293_RS08115	PF01168	Alanine racemase, N-terminal domain
CFVI03293_RS08115	PF00842	Alanine racemase, C-terminal domain
CFVI03293_RS08155	PF00456	Transketolase, thiamine diphosphate binding domain
CFVI03293_RS08195	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
CFVI03293_RS08200	PF02911	Formyl transferase, C-terminal domain
CFVI03293_RS08200	PF00551	Formyl transferase
CFVI03293_RS08205	PF00132	Bacterial transferase hexapeptide (six repeats)
CFVI03293_RS08205	PF14602	Hexapeptide repeat of succinyl-transferase
CFVI03293_RS08205	PF12464	Maltose acetyltransferase 
CFVI03293_RS08220	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
CFVI03293_RS08235	PF13537	Glutamine amidotransferase domain
CFVI03293_RS08235	PF00733	Asparagine synthase
CFVI03293_RS08240	PF13439	Glycosyltransferase Family 4
CFVI03293_RS08240	PF00534	Glycosyl transferases group 1
CFVI03293_RS08260	PF00534	Glycosyl transferases group 1
CFVI03293_RS08265	PF13537	Glutamine amidotransferase domain
CFVI03293_RS08265	PF00733	Asparagine synthase
CFVI03293_RS08330	PF00391	PEP-utilising enzyme, mobile domain
CFVI03293_RS08330	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
CFVI03293_RS08335	PF00117	Glutamine amidotransferase class-I
CFVI03293_RS08335	PF02540	NAD synthase
CFVI03293_RS08335	PF00958	GMP synthase C terminal domain
CFVI03293_RS08340	PF00483	Nucleotidyl transferase
CFVI03293_RS08345	PF02719	Polysaccharide biosynthesis protein
CFVI03293_RS08350	PF13302	Acetyltransferase (GNAT) domain
CFVI03293_RS08355	PF00700	Bacterial flagellin C-terminal helical region
CFVI03293_RS08355	PF00669	Bacterial flagellin N-terminal helical region
CFVI03293_RS08355	PF07196	Flagellin hook IN motif
CFVI03293_RS08360	PF00700	Bacterial flagellin C-terminal helical region
CFVI03293_RS08360	PF07196	Flagellin hook IN motif
CFVI03293_RS08360	PF00669	Bacterial flagellin N-terminal helical region
CFVI03293_RS08365	PF13847	Methyltransferase domain
CFVI03293_RS08365	PF10119	Predicted methyltransferase regulatory domain
CFVI03293_RS08380	PF01594	AI-2E family transporter
CFVI03293_RS08385	PF02386	Cation transport protein
CFVI03293_RS08390	PF02254	TrkA-N domain
CFVI03293_RS08390	PF02080	TrkA-C domain
CFVI03293_RS08395	PF00206	Lyase
CFVI03293_RS08395	PF10415	Fumarase C C-terminus
CFVI03293_RS08400	PF03605	Anaerobic c4-dicarboxylate membrane transporter
CFVI03293_RS08405	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS08405	PF13426	PAS domain
CFVI03293_RS08405	PF08447	PAS fold
CFVI03293_RS08420	PF01618	MotA/TolQ/ExbB proton channel family
CFVI03293_RS08425	PF02472	Biopolymer transport protein ExbD/TolR
CFVI03293_RS08430	PF03544	Gram-negative bacterial TonB protein C-terminal
CFVI03293_RS08435	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
CFVI03293_RS08440	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS08445	PF12911	N-terminal TM domain of oligopeptide transport permease C
CFVI03293_RS08445	PF00528	Binding-protein-dependent transport system inner membrane component
CFVI03293_RS08450	PF00005	ABC transporter
CFVI03293_RS08455	PF00005	ABC transporter
CFVI03293_RS08460	PF02040	Arsenical pump membrane protein
CFVI03293_RS08480	PF03738	Glutathionylspermidine synthase preATP-grasp
CFVI03293_RS08485	PF02441	Flavoprotein
CFVI03293_RS08490	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CFVI03293_RS08490	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CFVI03293_RS08495	PF04461	Protein of unknown function (DUF520)
CFVI03293_RS08500	PF01323	DSBA-like thioredoxin domain
CFVI03293_RS08505	PF04055	Radical SAM superfamily
CFVI03293_RS08505	PF06969	HemN C-terminal domain
CFVI03293_RS08510	PF01434	Peptidase family M41
CFVI03293_RS08510	PF17862	AAA+ lid domain
CFVI03293_RS08510	PF00004	ATPase family associated with various cellular activities (AAA)
CFVI03293_RS08515	PF00501	AMP-binding enzyme
CFVI03293_RS08515	PF13193	AMP-binding enzyme C-terminal domain
CFVI03293_RS08520	PF03349	Outer membrane protein transport protein (OMPP1/FadL/TodX)
CFVI03293_RS08525	PF01261	Xylose isomerase-like TIM barrel
CFVI03293_RS08600	PF03741	Integral membrane protein TerC family
CFVI03293_RS08605	PF00551	Formyl transferase
CFVI03293_RS08610	PF01256	Carbohydrate kinase
CFVI03293_RS08610	PF03853	YjeF-related protein N-terminus
CFVI03293_RS08615	PF01078	Magnesium chelatase, subunit ChlI
CFVI03293_RS08615	PF13335	Magnesium chelatase, subunit ChlI C-terminal
CFVI03293_RS08620	PF01327	Polypeptide deformylase
CFVI03293_RS08630	PF00574	Clp protease
CFVI03293_RS08635	PF05698	Bacterial trigger factor protein (TF) C-terminus
CFVI03293_RS08635	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
CFVI03293_RS08635	PF05697	Bacterial trigger factor protein (TF)
CFVI03293_RS08640	PF01227	GTP cyclohydrolase I
CFVI03293_RS08645	PF18269	T3SS EscN ATPase C-terminal domain
CFVI03293_RS08645	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
CFVI03293_RS08650	PF00266	Aminotransferase class-V
CFVI03293_RS08655	PF01592	NifU-like N terminal domain
CFVI03293_RS08655	PF01106	NifU-like domain
CFVI03293_RS08655	PF04324	BFD-like [2Fe-2S] binding domain
CFVI03293_RS08675	PF05198	Translation initiation factor IF-3, N-terminal domain
CFVI03293_RS08675	PF00707	Translation initiation factor IF-3, C-terminal domain
CFVI03293_RS08680	PF03129	Anticodon binding domain
CFVI03293_RS08680	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
CFVI03293_RS08680	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
CFVI03293_RS08735	PF03653	Uncharacterised protein family (UPF0093)
CFVI03293_RS08745	PF01252	Signal peptidase (SPase) II
CFVI03293_RS08750	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
CFVI03293_RS08750	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CFVI03293_RS08750	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
CFVI03293_RS08750	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
CFVI03293_RS08755	PF01649	Ribosomal protein S20
CFVI03293_RS08760	PF03462	PCRF domain
CFVI03293_RS08760	PF00472	RF-1 domain
CFVI03293_RS08765	PF04237	YjbR
CFVI03293_RS08775	PF03372	Endonuclease/Exonuclease/phosphatase family
CFVI03293_RS08780	PF00884	Sulfatase
CFVI03293_RS08780	PF08019	Phosphoethanolamine transferase EptA/EptB
CFVI03293_RS08785	PF01219	Prokaryotic diacylglycerol kinase
CFVI03293_RS08805	PF00950	ABC 3 transport family
CFVI03293_RS08810	PF00005	ABC transporter
CFVI03293_RS08820	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
CFVI03293_RS08830	PF03150	Di-haem cytochrome c peroxidase
CFVI03293_RS08830	PF00034	Cytochrome c
CFVI03293_RS08835	PF05231	MASE1
CFVI03293_RS08835	PF00563	EAL domain
CFVI03293_RS08840	PF00484	Carbonic anhydrase
CFVI03293_RS08845	PF00924	Mechanosensitive ion channel
CFVI03293_RS08860	PF01264	Chorismate synthase
CFVI03293_RS08865	PF14622	Ribonuclease-III-like
CFVI03293_RS08865	PF00035	Double-stranded RNA binding motif
CFVI03293_RS08870	PF00075	RNase H
CFVI03293_RS08880	PF01807	CHC2 zinc finger
CFVI03293_RS08880	PF08275	DNA primase catalytic core, N-terminal domain
CFVI03293_RS08900	PF03553	Na+/H+ antiporter family
CFVI03293_RS08900	PF13726	Na+-H+ antiporter family
CFVI03293_RS08910	PF03062	MBOAT, membrane-bound O-acyltransferase family
CFVI03293_RS08915	PF00920	Dehydratase family
CFVI03293_RS08920	PF02872	5'-nucleotidase, C-terminal domain
CFVI03293_RS08920	PF00149	Calcineurin-like phosphoesterase
CFVI03293_RS08925	PF06418	CTP synthase N-terminus
CFVI03293_RS08925	PF00117	Glutamine amidotransferase class-I
CFVI03293_RS08930	PF17768	RecJ OB domain
CFVI03293_RS08930	PF02272	DHHA1 domain
CFVI03293_RS08930	PF01368	DHH family
CFVI03293_RS08935	PF06965	Na+/H+ antiporter 1
CFVI03293_RS08940	PF14659	Phage integrase, N-terminal SAM-like domain
CFVI03293_RS08940	PF00589	Phage integrase family
CFVI03293_RS08960	PF00436	Single-strand binding protein family
CFVI03293_RS09010	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
CFVI03293_RS09035	PF00437	Type II/IV secretion system protein
CFVI03293_RS09045	PF02534	Type IV secretory system Conjugative DNA transfer
CFVI03293_RS09070	PF01751	Toprim domain
CFVI03293_RS09070	PF01131	DNA topoisomerase
CFVI03293_RS09080	PF13651	Adenine-specific methyltransferase EcoRI
CFVI03293_RS09110	PF00005	ABC transporter
CFVI03293_RS09115	PF01243	Pyridoxamine 5'-phosphate oxidase
CFVI03293_RS09115	PF10615	Protein of unknown function (DUF2470)
CFVI03293_RS09125	PF07715	TonB-dependent Receptor Plug Domain
CFVI03293_RS09125	PF00593	TonB dependent receptor
CFVI03293_RS09130	PF01032	FecCD transport family
CFVI03293_RS09135	PF00005	ABC transporter
CFVI03293_RS09140	PF01497	Periplasmic binding protein
CFVI03293_RS09165	PF07559	Flagellar basal body protein FlaE
CFVI03293_RS09165	PF00460	Flagella basal body rod protein
CFVI03293_RS09165	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
CFVI03293_RS09165	PF07196	Flagellin hook IN motif
CFVI03293_RS09175	PF01678	Diaminopimelate epimerase
CFVI03293_RS09180	PF01121	Dephospho-CoA kinase
CFVI03293_RS09185	PF01042	Endoribonuclease L-PSP
CFVI03293_RS09190	PF02769	AIR synthase related protein, C-terminal domain
CFVI03293_RS09190	PF00586	AIR synthase related protein, N-terminal domain
CFVI03293_RS09200	PF16193	AAA C-terminal domain
CFVI03293_RS09200	PF01661	Macro domain
CFVI03293_RS09200	PF05496	Holliday junction DNA helicase RuvB P-loop domain
CFVI03293_RS09200	PF12002	MgsA AAA+ ATPase C terminal
CFVI03293_RS09205	PF00892	EamA-like transporter family
CFVI03293_RS09210	PF08534	Redoxin
CFVI03293_RS09220	PF00156	Phosphoribosyl transferase domain
CFVI03293_RS09225	PF01765	Ribosome recycling factor
CFVI03293_RS09235	PF03840	Preprotein translocase SecG subunit
CFVI03293_RS09240	PF01027	Inhibitor of apoptosis-promoting Bax1
CFVI03293_RS09280	PF02525	Flavodoxin-like fold
CFVI03293_RS09305	PF02511	Thymidylate synthase complementing protein
CFVI03293_RS09310	PF05199	GMC oxidoreductase
CFVI03293_RS09310	PF00732	GMC oxidoreductase
CFVI03293_RS09320	PF07681	DoxX
CFVI03293_RS09325	PF00881	Nitroreductase family
CFVI03293_RS09345	PF00849	RNA pseudouridylate synthase
CFVI03293_RS09345	PF01479	S4 domain
CFVI03293_RS09350	PF00571	CBS domain
CFVI03293_RS09350	PF01380	SIS domain
CFVI03293_RS09355	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
CFVI03293_RS09355	PF17770	Ribonuclease J C-terminal domain
CFVI03293_RS09355	PF00753	Metallo-beta-lactamase superfamily
CFVI03293_RS09360	PF00398	Ribosomal RNA adenine dimethylase
CFVI03293_RS09365	PF05977	Transmembrane secretion effector
CFVI03293_RS09370	PF00977	Histidine biosynthesis protein
CFVI03293_RS09380	PF04055	Radical SAM superfamily
CFVI03293_RS09390	PF00849	RNA pseudouridylate synthase
CFVI03293_RS09395	PF00206	Lyase
CFVI03293_RS09395	PF10397	Adenylosuccinate lyase C-terminus
CFVI03293_RS09400	PF02867	Ribonucleotide reductase, barrel domain
CFVI03293_RS09400	PF03477	ATP cone domain
CFVI03293_RS09400	PF00317	Ribonucleotide reductase, all-alpha domain
CFVI03293_RS09405	PF00324	Amino acid permease
CFVI03293_RS09410	PF02075	Crossover junction endodeoxyribonuclease RuvC
CFVI03293_RS09420	PF11638	DnaA N-terminal domain
CFVI03293_RS09420	PF00308	Bacterial dnaA  protein
CFVI03293_RS09420	PF08299	Bacterial dnaA protein helix-turn-helix
CFVI03293_RS09440	PF01751	Toprim domain
CFVI03293_RS09440	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS09440	PF00986	DNA gyrase B subunit, carboxyl terminus
CFVI03293_RS09440	PF00204	DNA gyrase B
CFVI03293_RS09510	PF03144	Elongation factor Tu domain 2
CFVI03293_RS09510	PF00009	Elongation factor Tu GTP binding domain
CFVI03293_RS09510	PF00679	Elongation factor G C-terminus
CFVI03293_RS09770	PF02779	Transketolase, pyrimidine binding domain
CFVI03293_RS09770	PF00456	Transketolase, thiamine diphosphate binding domain
CFVI03293_RS09770	PF02780	Transketolase, C-terminal domain
CFVI03293_RS09790	PF13722	5TM C-terminal transporter carbon starvation CstA
CFVI03293_RS09790	PF02554	Carbon starvation protein CstA
CFVI03293_RS09845	PF00155	Aminotransferase class I and II
CFVI03293_RS09995	PF08299	Bacterial dnaA protein helix-turn-helix
CFVI03293_RS09995	PF11638	DnaA N-terminal domain
CFVI03293_RS09995	PF00308	Bacterial dnaA  protein
CFVI03293_RS10020	PF00204	DNA gyrase B
CFVI03293_RS10020	PF01751	Toprim domain
CFVI03293_RS10020	PF00986	DNA gyrase B subunit, carboxyl terminus
CFVI03293_RS10020	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
CFVI03293_RS10085	PF01351	Ribonuclease HII
CFVI03293_RS10170	PF11638	DnaA N-terminal domain
CFVI03293_RS10170	PF08299	Bacterial dnaA protein helix-turn-helix
CFVI03293_RS10170	PF00308	Bacterial dnaA  protein
CFVI03293_RS10200	PF08447	PAS fold
CFVI03293_RS10200	PF13426	PAS domain
CFVI03293_RS10200	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS10210	PF01420	Type I restriction modification DNA specificity domain
CFVI03293_RS10215	PF13847	Methyltransferase domain
CFVI03293_RS10215	PF10119	Predicted methyltransferase regulatory domain
CFVI03293_RS10280	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS10280	PF13426	PAS domain
CFVI03293_RS10280	PF08447	PAS fold
CFVI03293_RS10290	PF18674	TarS beta-glycosyltransferase C-terminal domain 1
CFVI03293_RS10290	PF00535	Glycosyl transferase family 2
CFVI03293_RS10295	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS10295	PF00672	HAMP domain
CFVI03293_RS10295	PF02743	Cache domain
CFVI03293_RS10300	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
CFVI03293_RS10300	PF08447	PAS fold
CFVI03293_RS10300	PF13426	PAS domain
