locus-tag class description FFA43_RS00005 PF00308 Bacterial dnaA protein FFA43_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix FFA43_RS00005 PF11638 DnaA N-terminal domain FFA43_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FFA43_RS00010 PF02767 DNA polymerase III beta subunit, central domain FFA43_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FFA43_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus FFA43_RS00015 PF00204 DNA gyrase B FFA43_RS00015 PF01751 Toprim domain FFA43_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS00025 PF14489 QueF-like protein FFA43_RS00045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFA43_RS00045 PF00460 Flagella basal body rod protein FFA43_RS00045 PF07559 Flagellar basal body protein FlaE FFA43_RS00050 PF03963 Flagellar hook capping protein - N-terminal region FFA43_RS00060 PF00009 Elongation factor Tu GTP binding domain FFA43_RS00060 PF00679 Elongation factor G C-terminus FFA43_RS00060 PF03144 Elongation factor Tu domain 2 FFA43_RS00075 PF01351 Ribonuclease HII FFA43_RS00100 PF00534 Glycosyl transferases group 1 FFA43_RS00100 PF13439 Glycosyltransferase Family 4 FFA43_RS00105 PF08402 TOBE domain FFA43_RS00105 PF00005 ABC transporter FFA43_RS00110 PF02719 Polysaccharide biosynthesis protein FFA43_RS00115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFA43_RS00125 PF00551 Formyl transferase FFA43_RS00125 PF02911 Formyl transferase, C-terminal domain FFA43_RS00135 PF13537 Glutamine amidotransferase domain FFA43_RS00135 PF00733 Asparagine synthase FFA43_RS00140 PF08666 SAF domain FFA43_RS00140 PF03102 NeuB family FFA43_RS00150 PF02350 UDP-N-acetylglucosamine 2-epimerase FFA43_RS00155 PF01370 NAD dependent epimerase/dehydratase family FFA43_RS00155 PF02911 Formyl transferase, C-terminal domain FFA43_RS00155 PF00551 Formyl transferase FFA43_RS00160 PF01575 MaoC like domain FFA43_RS00175 PF01555 DNA methylase FFA43_RS00185 PF01381 Helix-turn-helix FFA43_RS00190 PF02350 UDP-N-acetylglucosamine 2-epimerase FFA43_RS00195 PF02585 GlcNAc-PI de-N-acetylase FFA43_RS00200 PF02350 UDP-N-acetylglucosamine 2-epimerase FFA43_RS00215 PF00483 Nucleotidyl transferase FFA43_RS00220 PF02348 Cytidylyltransferase FFA43_RS00225 PF02348 Cytidylyltransferase FFA43_RS00230 PF02348 Cytidylyltransferase FFA43_RS00235 PF00202 Aminotransferase class-III FFA43_RS00255 PF00005 ABC transporter FFA43_RS00255 PF00664 ABC transporter transmembrane region FFA43_RS00285 PF13537 Glutamine amidotransferase domain FFA43_RS00285 PF00733 Asparagine synthase FFA43_RS00320 PF00535 Glycosyl transferase family 2 FFA43_RS00335 PF13537 Glutamine amidotransferase domain FFA43_RS00335 PF00733 Asparagine synthase FFA43_RS00340 PF08240 Alcohol dehydrogenase GroES-like domain FFA43_RS00340 PF00107 Zinc-binding dehydrogenase FFA43_RS00355 PF02350 UDP-N-acetylglucosamine 2-epimerase FFA43_RS00360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FFA43_RS00360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FFA43_RS00360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FFA43_RS00370 PF03372 Endonuclease/Exonuclease/phosphatase family FFA43_RS00380 PF02397 Bacterial sugar transferase FFA43_RS00405 PF04055 Radical SAM superfamily FFA43_RS00410 PF07963 Prokaryotic N-terminal methylation motif FFA43_RS00410 PF08334 Type II secretion system (T2SS), protein G FFA43_RS00415 PF00268 Ribonucleotide reductase, small chain FFA43_RS00420 PF00795 Carbon-nitrogen hydrolase FFA43_RS00430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FFA43_RS00430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FFA43_RS00435 PF00338 Ribosomal protein S10p/S20e FFA43_RS00440 PF00297 Ribosomal protein L3 FFA43_RS00445 PF00573 Ribosomal protein L4/L1 family FFA43_RS00450 PF00276 Ribosomal protein L23 FFA43_RS00455 PF00181 Ribosomal Proteins L2, RNA binding domain FFA43_RS00455 PF03947 Ribosomal Proteins L2, C-terminal domain FFA43_RS00460 PF00203 Ribosomal protein S19 FFA43_RS00465 PF00237 Ribosomal protein L22p/L17e FFA43_RS00470 PF07650 KH domain FFA43_RS00470 PF00189 Ribosomal protein S3, C-terminal domain FFA43_RS00475 PF00252 Ribosomal protein L16p/L10e FFA43_RS00480 PF00831 Ribosomal L29 protein FFA43_RS00485 PF00366 Ribosomal protein S17 FFA43_RS00490 PF00238 Ribosomal protein L14p/L23e FFA43_RS00495 PF00467 KOW motif FFA43_RS00495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FFA43_RS00500 PF00673 ribosomal L5P family C-terminus FFA43_RS00500 PF00281 Ribosomal protein L5 FFA43_RS00505 PF00253 Ribosomal protein S14p/S29e FFA43_RS00510 PF00410 Ribosomal protein S8 FFA43_RS00515 PF00347 Ribosomal protein L6 FFA43_RS00520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FFA43_RS00525 PF00333 Ribosomal protein S5, N-terminal domain FFA43_RS00525 PF03719 Ribosomal protein S5, C-terminal domain FFA43_RS00530 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FFA43_RS00535 PF00344 SecY translocase FFA43_RS00540 PF00557 Metallopeptidase family M24 FFA43_RS00545 PF01176 Translation initiation factor 1A / IF-1 FFA43_RS00550 PF00444 Ribosomal protein L36 FFA43_RS00555 PF00416 Ribosomal protein S13/S18 FFA43_RS00560 PF00411 Ribosomal protein S11 FFA43_RS00565 PF01479 S4 domain FFA43_RS00565 PF00163 Ribosomal protein S4/S9 N-terminal domain FFA43_RS00570 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FFA43_RS00570 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FFA43_RS00570 PF01000 RNA polymerase Rpb3/RpoA insert domain FFA43_RS00575 PF01196 Ribosomal protein L17 FFA43_RS00580 PF01106 NifU-like domain FFA43_RS00590 PF02875 Mur ligase family, glutamate ligase domain FFA43_RS00590 PF08245 Mur ligase middle domain FFA43_RS00595 PF02261 Aspartate decarboxylase FFA43_RS00600 PF00550 Phosphopantetheine attachment site FFA43_RS00600 PF00551 Formyl transferase FFA43_RS00600 PF00668 Condensation domain FFA43_RS00600 PF13193 AMP-binding enzyme C-terminal domain FFA43_RS00600 PF00501 AMP-binding enzyme FFA43_RS00605 PF17200 Single Cache domain 2 FFA43_RS00605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS00605 PF00672 HAMP domain FFA43_RS00610 PF02575 YbaB/EbfC DNA-binding family FFA43_RS00620 PF00348 Polyprenyl synthetase FFA43_RS00625 PF02779 Transketolase, pyrimidine binding domain FFA43_RS00625 PF00456 Transketolase, thiamine diphosphate binding domain FFA43_RS00625 PF02780 Transketolase, C-terminal domain FFA43_RS00630 PF03167 Uracil DNA glycosylase superfamily FFA43_RS00635 PF00453 Ribosomal protein L20 FFA43_RS00640 PF01632 Ribosomal protein L35 FFA43_RS00645 PF13416 Bacterial extracellular solute-binding protein FFA43_RS00660 PF00873 AcrB/AcrD/AcrF family FFA43_RS00665 PF00529 HlyD membrane-fusion protein of T1SS FFA43_RS00665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFA43_RS00670 PF00440 Bacterial regulatory proteins, tetR family FFA43_RS00675 PF12801 4Fe-4S binding domain FFA43_RS00675 PF13746 4Fe-4S dicluster domain FFA43_RS00675 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FFA43_RS00680 PF01165 Ribosomal protein S21 FFA43_RS00695 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FFA43_RS00700 PF12838 4Fe-4S dicluster domain FFA43_RS00705 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FFA43_RS00705 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FFA43_RS00705 PF00374 Nickel-dependent hydrogenase FFA43_RS00710 PF00361 Proton-conducting membrane transporter FFA43_RS00710 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FFA43_RS00715 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FFA43_RS00720 PF00146 NADH dehydrogenase FFA43_RS00725 PF00361 Proton-conducting membrane transporter FFA43_RS00730 PF12800 4Fe-4S binding domain FFA43_RS00730 PF13247 4Fe-4S dicluster domain FFA43_RS00735 PF00221 Aromatic amino acid lyase FFA43_RS00765 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS00765 PF00072 Response regulator receiver domain FFA43_RS00775 PF01967 MoaC family FFA43_RS00800 PF01435 Peptidase family M48 FFA43_RS00805 PF05992 SbmA/BacA-like family FFA43_RS00810 PF03605 Anaerobic c4-dicarboxylate membrane transporter FFA43_RS00815 PF03471 Transporter associated domain FFA43_RS00815 PF01595 Cyclin M transmembrane N-terminal domain FFA43_RS00815 PF00571 CBS domain FFA43_RS00845 PF01751 Toprim domain FFA43_RS00845 PF01131 DNA topoisomerase FFA43_RS00845 PF01396 Topoisomerase DNA binding C4 zinc finger FFA43_RS00850 PF04055 Radical SAM superfamily FFA43_RS00850 PF06968 Biotin and Thiamin Synthesis associated domain FFA43_RS00855 PF02080 TrkA-C domain FFA43_RS00855 PF02254 TrkA-N domain FFA43_RS00855 PF00999 Sodium/hydrogen exchanger family FFA43_RS00860 PF00285 Citrate synthase, C-terminal domain FFA43_RS00865 PF00459 Inositol monophosphatase family FFA43_RS00870 PF12849 PBP superfamily domain FFA43_RS00875 PF00528 Binding-protein-dependent transport system inner membrane component FFA43_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component FFA43_RS00885 PF00005 ABC transporter FFA43_RS00895 PF07690 Major Facilitator Superfamily FFA43_RS00900 PF02743 Cache domain FFA43_RS00900 PF00672 HAMP domain FFA43_RS00900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS00910 PF00994 Probable molybdopterin binding domain FFA43_RS00910 PF03454 MoeA C-terminal region (domain IV) FFA43_RS00910 PF03453 MoeA N-terminal region (domain I and II) FFA43_RS00920 PF00583 Acetyltransferase (GNAT) family FFA43_RS00925 PF00672 HAMP domain FFA43_RS00925 PF02743 Cache domain FFA43_RS00925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS00935 PF02391 MoaE protein FFA43_RS00945 PF05670 NFACT protein RNA binding domain FFA43_RS00950 PF00330 Aconitase family (aconitate hydratase) FFA43_RS00955 PF12804 MobA-like NTP transferase domain FFA43_RS00960 PF02253 Phospholipase A1 FFA43_RS00975 PF03952 Enolase, N-terminal domain FFA43_RS00975 PF00113 Enolase, C-terminal TIM barrel domain FFA43_RS00980 PF00154 recA bacterial DNA recombination protein FFA43_RS00985 PF02621 Menaquinone biosynthesis FFA43_RS00995 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FFA43_RS01020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FFA43_RS01020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FFA43_RS01020 PF13288 DXP reductoisomerase C-terminal domain FFA43_RS01025 PF00860 Permease family FFA43_RS01035 PF00814 Glycoprotease family FFA43_RS01065 PF04055 Radical SAM superfamily FFA43_RS01065 PF06463 Molybdenum Cofactor Synthesis C FFA43_RS01075 PF00465 Iron-containing alcohol dehydrogenase FFA43_RS01090 PF04452 RNA methyltransferase FFA43_RS01100 PF01367 5'-3' exonuclease, C-terminal SAM fold FFA43_RS01100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FFA43_RS01100 PF00476 DNA polymerase family A FFA43_RS01100 PF01612 3'-5' exonuclease FFA43_RS01105 PF01618 MotA/TolQ/ExbB proton channel family FFA43_RS01110 PF00691 OmpA family FFA43_RS01110 PF13677 Membrane MotB of proton-channel complex MotA/MotB FFA43_RS01115 PF00037 4Fe-4S binding domain FFA43_RS01120 PF00334 Nucleoside diphosphate kinase FFA43_RS01130 PF01783 Ribosomal L32p protein family FFA43_RS01135 PF02504 Fatty acid synthesis protein FFA43_RS01140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFA43_RS01140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFA43_RS01150 PF02660 Glycerol-3-phosphate acyltransferase FFA43_RS01160 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS01160 PF00072 Response regulator receiver domain FFA43_RS01165 PF00512 His Kinase A (phospho-acceptor) domain FFA43_RS01165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS01170 PF00037 4Fe-4S binding domain FFA43_RS01185 PF01207 Dihydrouridine synthase (Dus) FFA43_RS01200 PF02590 Predicted SPOUT methyltransferase FFA43_RS01205 PF17848 Acetyl-coA carboxylase zinc finger domain FFA43_RS01205 PF01039 Carboxyl transferase domain FFA43_RS01210 PF00578 AhpC/TSA family FFA43_RS01210 PF10417 C-terminal domain of 1-Cys peroxiredoxin FFA43_RS01235 PF13401 AAA domain FFA43_RS01235 PF09077 Mu B transposition protein, C terminal FFA43_RS01465 PF00266 Aminotransferase class-V FFA43_RS01470 PF13742 OB-fold nucleic acid binding domain FFA43_RS01470 PF02601 Exonuclease VII, large subunit FFA43_RS01475 PF01209 ubiE/COQ5 methyltransferase family FFA43_RS01485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFA43_RS01490 PF00005 ABC transporter FFA43_RS01510 PF02779 Transketolase, pyrimidine binding domain FFA43_RS01510 PF02780 Transketolase, C-terminal domain FFA43_RS01510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FFA43_RS01520 PF14842 FliG N-terminal domain FFA43_RS01520 PF01706 FliG C-terminal domain FFA43_RS01520 PF14841 FliG middle domain FFA43_RS01525 PF08345 Flagellar M-ring protein C-terminal FFA43_RS01525 PF01514 Secretory protein of YscJ/FliF family FFA43_RS01530 PF00155 Aminotransferase class I and II FFA43_RS01535 PF01842 ACT domain FFA43_RS01535 PF01817 Chorismate mutase type II FFA43_RS01535 PF00800 Prephenate dehydratase FFA43_RS01545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FFA43_RS01545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FFA43_RS01560 PF01725 Ham1 family FFA43_RS01565 PF00593 TonB dependent receptor FFA43_RS01565 PF07715 TonB-dependent Receptor Plug Domain FFA43_RS01570 PF00296 Luciferase-like monooxygenase FFA43_RS01575 PF01497 Periplasmic binding protein FFA43_RS01585 PF00005 ABC transporter FFA43_RS01595 PF01618 MotA/TolQ/ExbB proton channel family FFA43_RS01600 PF02472 Biopolymer transport protein ExbD/TolR FFA43_RS01615 PF16653 Saccharopine dehydrogenase C-terminal domain FFA43_RS01615 PF03435 Saccharopine dehydrogenase NADP binding domain FFA43_RS01625 PF01197 Ribosomal protein L31 FFA43_RS01630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFA43_RS01635 PF08032 RNA 2'-O ribose methyltransferase substrate binding FFA43_RS01635 PF00588 SpoU rRNA Methylase family FFA43_RS01650 PF00155 Aminotransferase class I and II FFA43_RS01655 PF00742 Homoserine dehydrogenase FFA43_RS01655 PF03447 Homoserine dehydrogenase, NAD binding domain FFA43_RS01655 PF01842 ACT domain FFA43_RS01660 PF02021 Uncharacterised protein family UPF0102 FFA43_RS01665 PF00085 Thioredoxin FFA43_RS01670 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFA43_RS01680 PF01113 Dihydrodipicolinate reductase, N-terminus FFA43_RS01680 PF05173 Dihydrodipicolinate reductase, C-terminus FFA43_RS01685 PF13537 Glutamine amidotransferase domain FFA43_RS01685 PF00156 Phosphoribosyl transferase domain FFA43_RS01700 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FFA43_RS01700 PF01502 Phosphoribosyl-AMP cyclohydrolase FFA43_RS01710 PF01063 Amino-transferase class IV FFA43_RS01720 PF00578 AhpC/TSA family FFA43_RS01730 PF02677 Epoxyqueuosine reductase QueH FFA43_RS01755 PF00033 Cytochrome b/b6/petB FFA43_RS01755 PF00032 Cytochrome b(C-terminal)/b6/petD FFA43_RS01760 PF00355 Rieske [2Fe-2S] domain FFA43_RS01760 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FFA43_RS01765 PF01810 LysE type translocator FFA43_RS01770 PF01134 Glucose inhibited division protein A FFA43_RS01770 PF13932 GidA associated domain FFA43_RS01775 PF00677 Lumazine binding domain FFA43_RS01780 PF02578 Multi-copper polyphenol oxidoreductase laccase FFA43_RS01790 PF00318 Ribosomal protein S2 FFA43_RS01795 PF00889 Elongation factor TS FFA43_RS01800 PF00005 ABC transporter FFA43_RS01810 PF01311 Bacterial export proteins, family 1 FFA43_RS01820 PF00625 Guanylate kinase FFA43_RS01825 PF02416 mttA/Hcf106 family FFA43_RS01830 PF03485 Arginyl tRNA synthetase N terminal domain FFA43_RS01830 PF05746 DALR anticodon binding domain FFA43_RS01830 PF00750 tRNA synthetases class I (R) FFA43_RS01835 PF03466 LysR substrate binding domain FFA43_RS01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFA43_RS01840 PF03601 Conserved hypothetical protein 698 FFA43_RS01845 PF01467 Cytidylyltransferase-like FFA43_RS01850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FFA43_RS01850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FFA43_RS01855 PF00162 Phosphoglycerate kinase FFA43_RS01860 PF00121 Triosephosphate isomerase FFA43_RS01880 PF12169 DNA polymerase III subunits gamma and tau domain III FFA43_RS01880 PF12170 DNA polymerase III tau subunit V interacting with alpha FFA43_RS01880 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FFA43_RS01885 PF07497 Rho termination factor, RNA-binding domain FFA43_RS01885 PF07498 Rho termination factor, N-terminal domain FFA43_RS01885 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFA43_RS01890 PF13395 HNH endonuclease FFA43_RS01890 PF18541 RuvC endonuclease subdomain 3 FFA43_RS01895 PF18541 RuvC endonuclease subdomain 3 FFA43_RS01895 PF13395 HNH endonuclease FFA43_RS01900 PF01867 CRISPR associated protein Cas1 FFA43_RS01905 PF09827 CRISPR associated protein Cas2 FFA43_RS01910 PF00248 Aldo/keto reductase family FFA43_RS01915 PF00403 Heavy-metal-associated domain FFA43_RS01945 PF00535 Glycosyl transferase family 2 FFA43_RS01950 PF01522 Polysaccharide deacetylase FFA43_RS01965 PF00534 Glycosyl transferases group 1 FFA43_RS01965 PF13439 Glycosyltransferase Family 4 FFA43_RS01970 PF01522 Polysaccharide deacetylase FFA43_RS01980 PF00534 Glycosyl transferases group 1 FFA43_RS01980 PF13439 Glycosyltransferase Family 4 FFA43_RS01990 PF03279 Bacterial lipid A biosynthesis acyltransferase FFA43_RS02000 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FFA43_RS02000 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FFA43_RS02000 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FFA43_RS02005 PF01370 NAD dependent epimerase/dehydratase family FFA43_RS02010 PF01068 ATP dependent DNA ligase domain FFA43_RS02010 PF14743 DNA ligase OB-like domain FFA43_RS02020 PF07690 Major Facilitator Superfamily FFA43_RS02025 PF01370 NAD dependent epimerase/dehydratase family FFA43_RS02030 PF14667 Polysaccharide biosynthesis C-terminal domain FFA43_RS02030 PF01943 Polysaccharide biosynthesis protein FFA43_RS02035 PF13439 Glycosyltransferase Family 4 FFA43_RS02035 PF00534 Glycosyl transferases group 1 FFA43_RS02045 PF00534 Glycosyl transferases group 1 FFA43_RS02045 PF13439 Glycosyltransferase Family 4 FFA43_RS02050 PF02516 Oligosaccharyl transferase STT3 subunit FFA43_RS02050 PF18527 STT3/PglB C-terminal beta-barrel domain FFA43_RS02055 PF00534 Glycosyl transferases group 1 FFA43_RS02055 PF13477 Glycosyl transferase 4-like FFA43_RS02060 PF02397 Bacterial sugar transferase FFA43_RS02065 PF17836 PglD N-terminal domain FFA43_RS02065 PF00132 Bacterial transferase hexapeptide (six repeats) FFA43_RS02070 PF00483 Nucleotidyl transferase FFA43_RS02075 PF00342 Phosphoglucose isomerase FFA43_RS02080 PF00210 Ferritin-like domain FFA43_RS02100 PF13649 Methyltransferase domain FFA43_RS02105 PF08241 Methyltransferase domain FFA43_RS02105 PF04301 Protein of unknown function (DUF452) FFA43_RS02110 PF00155 Aminotransferase class I and II FFA43_RS02125 PF01142 tRNA pseudouridine synthase D (TruD) FFA43_RS02145 PF07196 Flagellin hook IN motif FFA43_RS02145 PF02465 Flagellar hook-associated protein 2 N-terminus FFA43_RS02145 PF07195 Flagellar hook-associated protein 2 C-terminus FFA43_RS02165 PF02119 Flagellar P-ring protein FFA43_RS02185 PF07196 Flagellin hook IN motif FFA43_RS02185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFA43_RS02195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FFA43_RS02195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FFA43_RS02195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FFA43_RS02195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FFA43_RS02200 PF06508 Queuosine biosynthesis protein QueC FFA43_RS02205 PF00749 tRNA synthetases class I (E and Q), catalytic domain FFA43_RS02210 PF02325 YGGT family FFA43_RS02235 PF00258 Flavodoxin FFA43_RS02240 PF03222 Tryptophan/tyrosine permease family FFA43_RS02245 PF01709 Transcriptional regulator FFA43_RS02250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FFA43_RS02255 PF00375 Sodium:dicarboxylate symporter family FFA43_RS02260 PF13545 Crp-like helix-turn-helix domain FFA43_RS02260 PF00027 Cyclic nucleotide-binding domain FFA43_RS02265 PF00384 Molybdopterin oxidoreductase FFA43_RS02265 PF18364 Molybdopterin oxidoreductase N-terminal domain FFA43_RS02265 PF01568 Molydopterin dinucleotide binding domain FFA43_RS02280 PF00072 Response regulator receiver domain FFA43_RS02280 PF04397 LytTr DNA-binding domain FFA43_RS02285 PF01323 DSBA-like thioredoxin domain FFA43_RS02290 PF02600 Disulfide bond formation protein DsbB FFA43_RS02300 PF17425 Arylsulfotransferase Ig-like domain FFA43_RS02300 PF05935 Arylsulfotransferase (ASST) FFA43_RS02315 PF00403 Heavy-metal-associated domain FFA43_RS02325 PF01790 Prolipoprotein diacylglyceryl transferase FFA43_RS02330 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FFA43_RS02335 PF00890 FAD binding domain FFA43_RS02335 PF02910 Fumarate reductase flavoprotein C-term FFA43_RS02340 PF13183 4Fe-4S dicluster domain FFA43_RS02340 PF13085 2Fe-2S iron-sulfur cluster binding domain FFA43_RS02350 PF02664 S-Ribosylhomocysteinase (LuxS) FFA43_RS02355 PF00361 Proton-conducting membrane transporter FFA43_RS02360 PF00361 Proton-conducting membrane transporter FFA43_RS02365 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FFA43_RS02365 PF00361 Proton-conducting membrane transporter FFA43_RS02370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FFA43_RS02375 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FFA43_RS02380 PF12838 4Fe-4S dicluster domain FFA43_RS02385 PF00146 NADH dehydrogenase FFA43_RS02390 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FFA43_RS02390 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FFA43_RS02390 PF00384 Molybdopterin oxidoreductase FFA43_RS02395 PF10531 SLBB domain FFA43_RS02395 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FFA43_RS02395 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FFA43_RS02405 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FFA43_RS02405 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FFA43_RS02410 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FFA43_RS02415 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FFA43_RS02420 PF00350 Dynamin family FFA43_RS02425 PF00350 Dynamin family FFA43_RS02435 PF13473 Cupredoxin-like domain FFA43_RS02435 PF18764 Nitrous oxide reductase propeller repeat FFA43_RS02435 PF18793 Nitrous oxide reductase propeller repeat 2 FFA43_RS02450 PF12800 4Fe-4S binding domain FFA43_RS02450 PF12838 4Fe-4S dicluster domain FFA43_RS02465 PF12801 4Fe-4S binding domain FFA43_RS02465 PF13237 4Fe-4S dicluster domain FFA43_RS02470 PF08402 TOBE domain FFA43_RS02470 PF00005 ABC transporter FFA43_RS02490 PF03061 Thioesterase superfamily FFA43_RS02510 PF00909 Ammonium Transporter Family FFA43_RS02515 PF00543 Nitrogen regulatory protein P-II FFA43_RS02520 PF00468 Ribosomal protein L34 FFA43_RS02525 PF00825 Ribonuclease P FFA43_RS02530 PF01809 Putative membrane protein insertion efficiency factor FFA43_RS02535 PF14849 YidC periplasmic domain FFA43_RS02535 PF02096 60Kd inner membrane protein FFA43_RS02545 PF01926 50S ribosome-binding GTPase FFA43_RS02545 PF12631 MnmE helical domain FFA43_RS02545 PF10396 GTP-binding protein TrmE N-terminus FFA43_RS02550 PF02769 AIR synthase related protein, C-terminal domain FFA43_RS02550 PF00586 AIR synthase related protein, N-terminal domain FFA43_RS02550 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FFA43_RS02555 PF00226 DnaJ domain FFA43_RS02555 PF05099 Tellurite resistance protein TerB FFA43_RS02560 PF01808 AICARFT/IMPCHase bienzyme FFA43_RS02560 PF02142 MGS-like domain FFA43_RS02575 PF01883 Iron-sulfur cluster assembly protein FFA43_RS02580 PF00672 HAMP domain FFA43_RS02580 PF02743 Cache domain FFA43_RS02580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS02585 PF01063 Amino-transferase class IV FFA43_RS02605 PF01795 MraW methylase family FFA43_RS02620 PF02491 SHS2 domain inserted in FTSA FFA43_RS02625 PF12327 FtsZ family, C-terminal domain FFA43_RS02625 PF00091 Tubulin/FtsZ family, GTPase domain FFA43_RS02635 PF02689 Helicase FFA43_RS02635 PF05970 PIF1-like helicase FFA43_RS02645 PF03548 Outer membrane lipoprotein carrier protein LolA FFA43_RS02650 PF01043 SecA preprotein cross-linking domain FFA43_RS02650 PF07516 SecA Wing and Scaffold domain FFA43_RS02650 PF07517 SecA DEAD-like domain FFA43_RS02650 PF02810 SEC-C motif FFA43_RS02655 PF02687 FtsX-like permease family FFA43_RS02655 PF12704 MacB-like periplasmic core domain FFA43_RS02680 PF00860 Permease family FFA43_RS02685 PF04055 Radical SAM superfamily FFA43_RS02690 PF01966 HD domain FFA43_RS02690 PF01842 ACT domain FFA43_RS02690 PF08335 GlnD PII-uridylyltransferase FFA43_RS02695 PF01380 SIS domain FFA43_RS02705 PF00512 His Kinase A (phospho-acceptor) domain FFA43_RS02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS02705 PF00989 PAS fold FFA43_RS02705 PF11808 Phosphate regulon sensor protein PhoR FFA43_RS02710 PF00072 Response regulator receiver domain FFA43_RS02710 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS02715 PF03916 Polysulphide reductase, NrfD FFA43_RS02720 PF13247 4Fe-4S dicluster domain FFA43_RS02725 PF01568 Molydopterin dinucleotide binding domain FFA43_RS02725 PF00384 Molybdopterin oxidoreductase FFA43_RS02725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFA43_RS02725 PF10518 TAT (twin-arginine translocation) pathway signal sequence FFA43_RS02730 PF04143 Sulphur transport FFA43_RS02735 PF01206 Sulfurtransferase TusA FFA43_RS02740 PF01177 Asp/Glu/Hydantoin racemase FFA43_RS02745 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FFA43_RS02770 PF10531 SLBB domain FFA43_RS02820 PF00990 Diguanylate cyclase, GGDEF domain FFA43_RS02820 PF00072 Response regulator receiver domain FFA43_RS02825 PF02040 Arsenical pump membrane protein FFA43_RS02835 PF02464 Competence-damaged protein FFA43_RS02835 PF00994 Probable molybdopterin binding domain FFA43_RS02845 PF00133 tRNA synthetases class I (I, L, M and V) FFA43_RS02845 PF08264 Anticodon-binding domain of tRNA FFA43_RS02850 PF01425 Amidase FFA43_RS02855 PF00571 CBS domain FFA43_RS02855 PF00478 IMP dehydrogenase / GMP reductase domain FFA43_RS02860 PF00561 alpha/beta hydrolase fold FFA43_RS02875 PF02630 SCO1/SenC FFA43_RS02880 PF01098 Cell cycle protein FFA43_RS02885 PF00849 RNA pseudouridylate synthase FFA43_RS02885 PF01479 S4 domain FFA43_RS02895 PF02390 Putative methyltransferase FFA43_RS02900 PF00005 ABC transporter FFA43_RS02900 PF09383 NIL domain FFA43_RS02915 PF00696 Amino acid kinase family FFA43_RS02920 PF01192 RNA polymerase Rpb6 FFA43_RS02925 PF02824 TGS domain FFA43_RS02925 PF13291 ACT domain FFA43_RS02925 PF04607 Region found in RelA / SpoT proteins FFA43_RS02930 PF00579 tRNA synthetases class I (W and Y) FFA43_RS02940 PF01520 N-acetylmuramoyl-L-alanine amidase FFA43_RS02945 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FFA43_RS02945 PF01266 FAD dependent oxidoreductase FFA43_RS02955 PF00958 GMP synthase C terminal domain FFA43_RS02955 PF13673 Acetyltransferase (GNAT) domain FFA43_RS02955 PF03352 Methyladenine glycosylase FFA43_RS02955 PF00117 Glutamine amidotransferase class-I FFA43_RS02955 PF13302 Acetyltransferase (GNAT) domain FFA43_RS02960 PF00719 Inorganic pyrophosphatase FFA43_RS02970 PF02938 GAD domain FFA43_RS02970 PF00152 tRNA synthetases class II (D, K and N) FFA43_RS02970 PF01336 OB-fold nucleic acid binding domain FFA43_RS02975 PF01513 ATP-NAD kinase FFA43_RS02980 PF13476 AAA domain FFA43_RS02985 PF00072 Response regulator receiver domain FFA43_RS02985 PF00990 Diguanylate cyclase, GGDEF domain FFA43_RS02990 PF01026 TatD related DNase FFA43_RS03000 PF03330 Lytic transglycolase FFA43_RS03000 PF05036 Sporulation related domain FFA43_RS03005 PF00475 Imidazoleglycerol-phosphate dehydratase FFA43_RS03025 PF01926 50S ribosome-binding GTPase FFA43_RS03040 PF03717 Penicillin-binding Protein dimerisation domain FFA43_RS03040 PF00905 Penicillin binding protein transpeptidase domain FFA43_RS03045 PF01312 FlhB HrpN YscU SpaS Family FFA43_RS03070 PF00202 Aminotransferase class-III FFA43_RS03080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FFA43_RS03080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FFA43_RS03085 PF10502 Signal peptidase, peptidase S26 FFA43_RS03095 PF02502 Ribose/Galactose Isomerase FFA43_RS03105 PF00156 Phosphoribosyl transferase domain FFA43_RS03115 PF00883 Cytosol aminopeptidase family, catalytic domain FFA43_RS03120 PF06071 Protein of unknown function (DUF933) FFA43_RS03120 PF01926 50S ribosome-binding GTPase FFA43_RS03125 PF01568 Molydopterin dinucleotide binding domain FFA43_RS03125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFA43_RS03125 PF00384 Molybdopterin oxidoreductase FFA43_RS03130 PF12800 4Fe-4S binding domain FFA43_RS03130 PF12838 4Fe-4S dicluster domain FFA43_RS03135 PF12801 4Fe-4S binding domain FFA43_RS03135 PF12837 4Fe-4S binding domain FFA43_RS03140 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FFA43_RS03160 PF02666 Phosphatidylserine decarboxylase FFA43_RS03165 PF00149 Calcineurin-like phosphoesterase FFA43_RS03170 PF05525 Branched-chain amino acid transport protein FFA43_RS03175 PF01634 ATP phosphoribosyltransferase FFA43_RS03180 PF03309 Type III pantothenate kinase FFA43_RS03190 PF15437 Plasminogen-binding protein pgbA C-terminal FFA43_RS03200 PF02686 Glu-tRNAGln amidotransferase C subunit FFA43_RS03205 PF00437 Type II/IV secretion system protein FFA43_RS03215 PF01475 Ferric uptake regulator family FFA43_RS03220 PF01336 OB-fold nucleic acid binding domain FFA43_RS03220 PF00152 tRNA synthetases class II (D, K and N) FFA43_RS03225 PF00464 Serine hydroxymethyltransferase FFA43_RS03240 PF08501 Shikimate dehydrogenase substrate binding domain FFA43_RS03245 PF02132 RecR protein FFA43_RS03245 PF13662 Toprim domain FFA43_RS03255 PF00072 Response regulator receiver domain FFA43_RS03255 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS03260 PF00684 DnaJ central domain FFA43_RS03260 PF01556 DnaJ C terminal domain FFA43_RS03260 PF00226 DnaJ domain FFA43_RS03265 PF01084 Ribosomal protein S18 FFA43_RS03270 PF00436 Single-strand binding protein family FFA43_RS03275 PF01250 Ribosomal protein S6 FFA43_RS03285 PF00773 RNB domain FFA43_RS03295 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FFA43_RS03295 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FFA43_RS03300 PF04748 Divergent polysaccharide deacetylase FFA43_RS03305 PF02481 DNA recombination-mediator protein A FFA43_RS03305 PF18255 DNA processing protein A sterile alpha motif domain FFA43_RS03310 PF03652 Holliday junction resolvase FFA43_RS03315 PF01189 16S rRNA methyltransferase RsmB/F FFA43_RS03315 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FFA43_RS03315 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FFA43_RS03325 PF02547 Queuosine biosynthesis protein FFA43_RS03330 PF00902 Sec-independent protein translocase protein (TatC) FFA43_RS03335 PF02416 mttA/Hcf106 family FFA43_RS03340 PF04055 Radical SAM superfamily FFA43_RS03340 PF06969 HemN C-terminal domain FFA43_RS03345 PF00293 NUDIX domain FFA43_RS03350 PF13840 ACT domain FFA43_RS03350 PF01842 ACT domain FFA43_RS03350 PF00696 Amino acid kinase family FFA43_RS03365 PF00809 Pterin binding enzyme FFA43_RS03370 PF01653 NAD-dependent DNA ligase adenylation domain FFA43_RS03370 PF00533 BRCA1 C Terminus (BRCT) domain FFA43_RS03370 PF03120 NAD-dependent DNA ligase OB-fold domain FFA43_RS03370 PF12826 Helix-hairpin-helix motif FFA43_RS03375 PF01728 FtsJ-like methyltransferase FFA43_RS03375 PF01479 S4 domain FFA43_RS03380 PF01687 Riboflavin kinase FFA43_RS03380 PF06574 FAD synthetase FFA43_RS03385 PF13847 Methyltransferase domain FFA43_RS03400 PF01063 Amino-transferase class IV FFA43_RS03405 PF00425 chorismate binding enzyme FFA43_RS03410 PF00312 Ribosomal protein S15 FFA43_RS03415 PF02082 Transcriptional regulator FFA43_RS03420 PF00771 FHIPEP family FFA43_RS03445 PF01025 GrpE FFA43_RS03450 PF00012 Hsp70 protein FFA43_RS03460 PF03976 Polyphosphate kinase 2 (PPK2) FFA43_RS03465 PF00085 Thioredoxin FFA43_RS03465 PF02683 Cytochrome C biogenesis protein transmembrane region FFA43_RS03465 PF11412 Disulphide bond corrector protein DsbC FFA43_RS03470 PF00990 Diguanylate cyclase, GGDEF domain FFA43_RS03475 PF00990 Diguanylate cyclase, GGDEF domain FFA43_RS03485 PF02348 Cytidylyltransferase FFA43_RS03490 PF00291 Pyridoxal-phosphate dependent enzyme FFA43_RS03495 PF00696 Amino acid kinase family FFA43_RS03500 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FFA43_RS03505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFA43_RS03510 PF02540 NAD synthase FFA43_RS03515 PF00753 Metallo-beta-lactamase superfamily FFA43_RS03525 PF08003 Protein of unknown function (DUF1698) FFA43_RS03530 PF01546 Peptidase family M20/M25/M40 FFA43_RS03530 PF07687 Peptidase dimerisation domain FFA43_RS03535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FFA43_RS03535 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FFA43_RS03555 PF02623 FliW protein FFA43_RS03560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFA43_RS03565 PF00005 ABC transporter FFA43_RS03565 PF12704 MacB-like periplasmic core domain FFA43_RS03565 PF02687 FtsX-like permease family FFA43_RS03570 PF02321 Outer membrane efflux protein FFA43_RS03585 PF00072 Response regulator receiver domain FFA43_RS03585 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS03590 PF17820 PDZ domain FFA43_RS03590 PF13180 PDZ domain FFA43_RS03595 PF00226 DnaJ domain FFA43_RS03595 PF01556 DnaJ C terminal domain FFA43_RS03600 PF13411 MerR HTH family regulatory protein FFA43_RS03605 PF00999 Sodium/hydrogen exchanger family FFA43_RS03605 PF02254 TrkA-N domain FFA43_RS03610 PF03471 Transporter associated domain FFA43_RS03610 PF00999 Sodium/hydrogen exchanger family FFA43_RS03610 PF02080 TrkA-C domain FFA43_RS03615 PF01925 Sulfite exporter TauE/SafE FFA43_RS03620 PF00119 ATP synthase A chain FFA43_RS03630 PF02581 Thiamine monophosphate synthase FFA43_RS03635 PF02934 GatB/GatE catalytic domain FFA43_RS03635 PF02637 GatB domain FFA43_RS03640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FFA43_RS03640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FFA43_RS03645 PF00933 Glycosyl hydrolase family 3 N terminal domain FFA43_RS03655 PF00892 EamA-like transporter family FFA43_RS03660 PF00005 ABC transporter FFA43_RS03665 PF00528 Binding-protein-dependent transport system inner membrane component FFA43_RS03670 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFA43_RS03675 PF01066 CDP-alcohol phosphatidyltransferase FFA43_RS03685 PF00701 Dihydrodipicolinate synthetase family FFA43_RS03690 PF00675 Insulinase (Peptidase family M16) FFA43_RS03690 PF05193 Peptidase M16 inactive domain FFA43_RS03695 PF01180 Dihydroorotate dehydrogenase FFA43_RS03700 PF00005 ABC transporter FFA43_RS03700 PF00664 ABC transporter transmembrane region FFA43_RS03705 PF01406 tRNA synthetases class I (C) catalytic domain FFA43_RS03705 PF09190 DALR domain FFA43_RS03710 PF03023 Lipid II flippase MurJ FFA43_RS03715 PF00270 DEAD/DEAH box helicase FFA43_RS03715 PF00271 Helicase conserved C-terminal domain FFA43_RS03730 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FFA43_RS03740 PF00133 tRNA synthetases class I (I, L, M and V) FFA43_RS03740 PF01588 Putative tRNA binding domain FFA43_RS03740 PF09334 tRNA synthetases class I (M) FFA43_RS03770 PF12951 Passenger-associated-transport-repeat FFA43_RS03770 PF00082 Subtilase family FFA43_RS03770 PF03797 Autotransporter beta-domain FFA43_RS03790 PF04055 Radical SAM superfamily FFA43_RS03800 PF01739 CheR methyltransferase, SAM binding domain FFA43_RS03805 PF01339 CheB methylesterase FFA43_RS03805 PF00072 Response regulator receiver domain FFA43_RS03815 PF01330 RuvA N terminal domain FFA43_RS03815 PF07499 RuvA, C-terminal domain FFA43_RS03820 PF01820 D-ala D-ala ligase N-terminus FFA43_RS03820 PF07478 D-ala D-ala ligase C-terminus FFA43_RS03835 PF02875 Mur ligase family, glutamate ligase domain FFA43_RS03835 PF08245 Mur ligase middle domain FFA43_RS03845 PF00871 Acetokinase family FFA43_RS03850 PF01515 Phosphate acetyl/butaryl transferase FFA43_RS03855 PF02107 Flagellar L-ring protein FFA43_RS03860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFA43_RS03860 PF00205 Thiamine pyrophosphate enzyme, central domain FFA43_RS03860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFA43_RS03865 PF10369 Small subunit of acetolactate synthase FFA43_RS03870 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FFA43_RS03870 PF00132 Bacterial transferase hexapeptide (six repeats) FFA43_RS03875 PF09335 SNARE associated Golgi protein FFA43_RS03880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FFA43_RS03880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FFA43_RS03885 PF02445 Quinolinate synthetase A protein FFA43_RS03890 PF08448 PAS fold FFA43_RS03890 PF08447 PAS fold FFA43_RS03890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS03900 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS03900 PF00072 Response regulator receiver domain FFA43_RS03910 PF01568 Molydopterin dinucleotide binding domain FFA43_RS03910 PF18364 Molybdopterin oxidoreductase N-terminal domain FFA43_RS03910 PF00384 Molybdopterin oxidoreductase FFA43_RS03920 PF00551 Formyl transferase FFA43_RS03920 PF01842 ACT domain FFA43_RS03925 PF00588 SpoU rRNA Methylase family FFA43_RS03935 PF02092 Glycyl-tRNA synthetase beta subunit FFA43_RS03940 PF02086 D12 class N6 adenine-specific DNA methyltransferase FFA43_RS03945 PF00206 Lyase FFA43_RS03945 PF10397 Adenylosuccinate lyase C-terminus FFA43_RS03950 PF00939 Sodium:sulfate symporter transmembrane region FFA43_RS04015 PF00072 Response regulator receiver domain FFA43_RS04015 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS04025 PF03458 UPF0126 domain FFA43_RS04030 PF00202 Aminotransferase class-III FFA43_RS04035 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFA43_RS04040 PF03748 Flagellar basal body-associated protein FliL FFA43_RS04045 PF01648 4'-phosphopantetheinyl transferase superfamily FFA43_RS04050 PF00291 Pyridoxal-phosphate dependent enzyme FFA43_RS04060 PF01053 Cys/Met metabolism PLP-dependent enzyme FFA43_RS04065 PF03063 Prismane/CO dehydrogenase family FFA43_RS04070 PF00171 Aldehyde dehydrogenase family FFA43_RS04085 PF01960 ArgJ family FFA43_RS04120 PF00830 Ribosomal L28 family FFA43_RS04125 PF03180 NLPA lipoprotein FFA43_RS04130 PF08543 Phosphomethylpyrimidine kinase FFA43_RS04135 PF00528 Binding-protein-dependent transport system inner membrane component FFA43_RS04140 PF09383 NIL domain FFA43_RS04140 PF00005 ABC transporter FFA43_RS04150 PF08264 Anticodon-binding domain of tRNA FFA43_RS04150 PF10458 Valyl tRNA synthetase tRNA binding arm FFA43_RS04150 PF00133 tRNA synthetases class I (I, L, M and V) FFA43_RS04155 PF00206 Lyase FFA43_RS04155 PF10415 Fumarase C C-terminus FFA43_RS04170 PF13361 UvrD-like helicase C-terminal domain FFA43_RS04170 PF00580 UvrD/REP helicase N-terminal domain FFA43_RS04175 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FFA43_RS04175 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FFA43_RS04190 PF13183 4Fe-4S dicluster domain FFA43_RS04190 PF13085 2Fe-2S iron-sulfur cluster binding domain FFA43_RS04200 PF00183 Hsp90 protein FFA43_RS04220 PF00171 Aldehyde dehydrogenase family FFA43_RS04225 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFA43_RS04235 PF05175 Methyltransferase small domain FFA43_RS04240 PF03692 Putative zinc- or iron-chelating domain FFA43_RS04250 PF00218 Indole-3-glycerol phosphate synthase FFA43_RS04260 PF03883 Peroxide stress protein YaaA FFA43_RS04265 PF00216 Bacterial DNA-binding protein FFA43_RS04275 PF07690 Major Facilitator Superfamily FFA43_RS04285 PF02785 Biotin carboxylase C-terminal domain FFA43_RS04285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFA43_RS04285 PF00289 Biotin carboxylase, N-terminal domain FFA43_RS04295 PF04377 Arginine-tRNA-protein transferase, C terminus FFA43_RS04295 PF04376 Arginine-tRNA-protein transferase, N terminus FFA43_RS04305 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FFA43_RS04310 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FFA43_RS04315 PF01384 Phosphate transporter family FFA43_RS04320 PF00669 Bacterial flagellin N-terminal helical region FFA43_RS04320 PF00700 Bacterial flagellin C-terminal helical region FFA43_RS04325 PF09397 Ftsk gamma domain FFA43_RS04325 PF01580 FtsK/SpoIIIE family FFA43_RS04325 PF17854 FtsK alpha domain FFA43_RS04340 PF00348 Polyprenyl synthetase FFA43_RS04345 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FFA43_RS04345 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FFA43_RS04345 PF01488 Shikimate / quinate 5-dehydrogenase FFA43_RS04350 PF04073 Aminoacyl-tRNA editing domain FFA43_RS04350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFA43_RS04350 PF03129 Anticodon binding domain FFA43_RS04360 PF03900 Porphobilinogen deaminase, C-terminal domain FFA43_RS04360 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FFA43_RS04370 PF03062 MBOAT, membrane-bound O-acyltransferase family FFA43_RS04375 PF03631 Virulence factor BrkB FFA43_RS04380 PF01565 FAD binding domain FFA43_RS04380 PF02913 FAD linked oxidases, C-terminal domain FFA43_RS04390 PF01551 Peptidase family M23 FFA43_RS04390 PF04225 Opacity-associated protein A LysM-like domain FFA43_RS04395 PF00571 CBS domain FFA43_RS04395 PF03448 MgtE intracellular N domain FFA43_RS04395 PF01769 Divalent cation transporter FFA43_RS04400 PF00293 NUDIX domain FFA43_RS04410 PF00166 Chaperonin 10 Kd subunit FFA43_RS04415 PF00118 TCP-1/cpn60 chaperonin family FFA43_RS04425 PF02646 RmuC family FFA43_RS04430 PF00710 Asparaginase, N-terminal FFA43_RS04430 PF17763 Glutaminase/Asparaginase C-terminal domain FFA43_RS04450 PF00694 Aconitase C-terminal domain FFA43_RS04455 PF00180 Isocitrate/isopropylmalate dehydrogenase FFA43_RS04470 PF12627 Probable RNA and SrmB- binding site of polymerase A FFA43_RS04470 PF01966 HD domain FFA43_RS04470 PF01743 Poly A polymerase head domain FFA43_RS04475 PF02541 Ppx/GppA phosphatase family FFA43_RS04480 PF09424 Yqey-like protein FFA43_RS04490 PF00482 Type II secretion system (T2SS), protein F FFA43_RS04495 PF00437 Type II/IV secretion system protein FFA43_RS04495 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FFA43_RS04510 PF03958 Bacterial type II/III secretion system short domain FFA43_RS04510 PF00263 Bacterial type II and III secretion system protein FFA43_RS04530 PF01926 50S ribosome-binding GTPase FFA43_RS04530 PF07650 KH domain FFA43_RS04535 PF07724 AAA domain (Cdc48 subfamily) FFA43_RS04535 PF10431 C-terminal, D2-small domain, of ClpB protein FFA43_RS04540 PF00227 Proteasome subunit FFA43_RS04545 PF03948 Ribosomal protein L9, C-terminal domain FFA43_RS04545 PF01281 Ribosomal protein L9, N-terminal domain FFA43_RS04550 PF00925 GTP cyclohydrolase II FFA43_RS04550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FFA43_RS04555 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FFA43_RS04555 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FFA43_RS04560 PF00330 Aconitase family (aconitate hydratase) FFA43_RS04560 PF06434 Aconitate hydratase 2 N-terminus FFA43_RS04560 PF11791 Aconitate B N-terminal domain FFA43_RS04565 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FFA43_RS04565 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain FFA43_RS04565 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FFA43_RS04575 PF00990 Diguanylate cyclase, GGDEF domain FFA43_RS04585 PF04551 GcpE protein FFA43_RS04590 PF00772 DnaB-like helicase N terminal domain FFA43_RS04590 PF03796 DnaB-like helicase C terminal domain FFA43_RS04600 PF01702 Queuine tRNA-ribosyltransferase FFA43_RS04615 PF00106 short chain dehydrogenase FFA43_RS04620 PF05958 tRNA (Uracil-5-)-methyltransferase FFA43_RS04625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS04625 PF16591 Helical bimodular sensor domain FFA43_RS04625 PF00672 HAMP domain FFA43_RS04635 PF13419 Haloacid dehalogenase-like hydrolase FFA43_RS04640 PF03971 Monomeric isocitrate dehydrogenase FFA43_RS04645 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FFA43_RS04645 PF00056 lactate/malate dehydrogenase, NAD binding domain FFA43_RS04655 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FFA43_RS04655 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FFA43_RS04655 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FFA43_RS04660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFA43_RS04660 PF00205 Thiamine pyrophosphate enzyme, central domain FFA43_RS04660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFA43_RS04670 PF00258 Flavodoxin FFA43_RS04680 PF01168 Alanine racemase, N-terminal domain FFA43_RS04685 PF17820 PDZ domain FFA43_RS04685 PF02163 Peptidase family M50 FFA43_RS04690 PF00834 Ribulose-phosphate 3 epimerase family FFA43_RS04695 PF07733 Bacterial DNA polymerase III alpha NTPase domain FFA43_RS04695 PF11490 DNA polymerase III polC-type N-terminus II FFA43_RS04695 PF00929 Exonuclease FFA43_RS04695 PF01336 OB-fold nucleic acid binding domain FFA43_RS04695 PF14579 Helix-hairpin-helix motif FFA43_RS04695 PF02811 PHP domain FFA43_RS04695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FFA43_RS04700 PF00270 DEAD/DEAH box helicase FFA43_RS04700 PF00271 Helicase conserved C-terminal domain FFA43_RS04700 PF17764 3′ DNA-binding domain (3′BD) FFA43_RS04700 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FFA43_RS04700 PF18074 Primosomal protein N C-terminal domain FFA43_RS04705 PF07963 Prokaryotic N-terminal methylation motif FFA43_RS04705 PF08334 Type II secretion system (T2SS), protein G FFA43_RS04710 PF07963 Prokaryotic N-terminal methylation motif FFA43_RS04710 PF08334 Type II secretion system (T2SS), protein G FFA43_RS04715 PF08334 Type II secretion system (T2SS), protein G FFA43_RS04715 PF07963 Prokaryotic N-terminal methylation motif FFA43_RS04730 PF13426 PAS domain FFA43_RS04730 PF00672 HAMP domain FFA43_RS04730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS04735 PF02151 UvrB/uvrC motif FFA43_RS04735 PF04851 Type III restriction enzyme, res subunit FFA43_RS04735 PF00271 Helicase conserved C-terminal domain FFA43_RS04735 PF17757 UvrB interaction domain FFA43_RS04735 PF12344 Ultra-violet resistance protein B FFA43_RS04750 PF02503 Polyphosphate kinase middle domain FFA43_RS04750 PF13090 Polyphosphate kinase C-terminal domain 2 FFA43_RS04750 PF13089 Polyphosphate kinase N-terminal domain FFA43_RS04750 PF17941 Polyphosphate kinase C-terminal domain 1 FFA43_RS04755 PF08267 Cobalamin-independent synthase, N-terminal domain FFA43_RS04755 PF01717 Cobalamin-independent synthase, Catalytic domain FFA43_RS04770 PF04305 Protein of unknown function (DUF455) FFA43_RS04785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFA43_RS04790 PF03453 MoeA N-terminal region (domain I and II) FFA43_RS04790 PF03454 MoeA C-terminal region (domain IV) FFA43_RS04790 PF00994 Probable molybdopterin binding domain FFA43_RS04805 PF01467 Cytidylyltransferase-like FFA43_RS04810 PF02223 Thymidylate kinase FFA43_RS04815 PF13393 Histidyl-tRNA synthetase FFA43_RS04815 PF03129 Anticodon binding domain FFA43_RS04820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FFA43_RS04820 PF17810 Arginine decarboxylase helical bundle domain FFA43_RS04820 PF17944 Arginine decarboxylase C-terminal helical extension FFA43_RS04825 PF06426 Serine acetyltransferase, N-terminal FFA43_RS04825 PF00132 Bacterial transferase hexapeptide (six repeats) FFA43_RS04830 PF00155 Aminotransferase class I and II FFA43_RS04835 PF01501 Glycosyl transferase family 8 FFA43_RS04835 PF00535 Glycosyl transferase family 2 FFA43_RS04840 PF00994 Probable molybdopterin binding domain FFA43_RS04845 PF17862 AAA+ lid domain FFA43_RS04845 PF00004 ATPase family associated with various cellular activities (AAA) FFA43_RS04845 PF01434 Peptidase family M41 FFA43_RS04850 PF04055 Radical SAM superfamily FFA43_RS04850 PF00919 Uncharacterized protein family UPF0004 FFA43_RS04860 PF01761 3-dehydroquinate synthase FFA43_RS04865 PF00309 Sigma-54 factor, Activator interacting domain (AID) FFA43_RS04865 PF04963 Sigma-54 factor, core binding domain FFA43_RS04865 PF04552 Sigma-54, DNA binding domain FFA43_RS04870 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFA43_RS04870 PF00005 ABC transporter FFA43_RS04880 PF01479 S4 domain FFA43_RS04885 PF00216 Bacterial DNA-binding protein FFA43_RS04890 PF04101 Glycosyltransferase family 28 C-terminal domain FFA43_RS04890 PF03033 Glycosyltransferase family 28 N-terminal domain FFA43_RS04895 PF01098 Cell cycle protein FFA43_RS04900 PF00589 Phage integrase family FFA43_RS04900 PF18644 Phage integrase SAM-like domain FFA43_RS04905 PF00764 Arginosuccinate synthase FFA43_RS04915 PF02618 YceG-like family FFA43_RS04925 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FFA43_RS04930 PF00586 AIR synthase related protein, N-terminal domain FFA43_RS04930 PF02769 AIR synthase related protein, C-terminal domain FFA43_RS04935 PF01924 Hydrogenase formation hypA family FFA43_RS04940 PF01455 HupF/HypC family FFA43_RS04945 PF02492 CobW/HypB/UreG, nucleotide-binding domain FFA43_RS04950 PF01402 Ribbon-helix-helix protein, copG family FFA43_RS04950 PF08753 NikR C terminal nickel binding domain FFA43_RS04955 PF07503 HypF finger FFA43_RS04955 PF01300 Telomere recombination FFA43_RS04955 PF17788 HypF Kae1-like domain FFA43_RS04955 PF00708 Acylphosphatase FFA43_RS04965 PF01750 Hydrogenase maturation protease FFA43_RS04970 PF01292 Prokaryotic cytochrome b561 FFA43_RS04975 PF00374 Nickel-dependent hydrogenase FFA43_RS04980 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FFA43_RS04980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FFA43_RS04980 PF10518 TAT (twin-arginine translocation) pathway signal sequence FFA43_RS04990 PF03591 AzlC protein FFA43_RS04995 PF00072 Response regulator receiver domain FFA43_RS04995 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS05000 PF00512 His Kinase A (phospho-acceptor) domain FFA43_RS05000 PF02743 Cache domain FFA43_RS05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS05010 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FFA43_RS05010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFA43_RS05015 PF13247 4Fe-4S dicluster domain FFA43_RS05020 PF03916 Polysulphide reductase, NrfD FFA43_RS05035 PF05573 NosL FFA43_RS05050 PF00005 ABC transporter FFA43_RS05065 PF00004 ATPase family associated with various cellular activities (AAA) FFA43_RS05065 PF07724 AAA domain (Cdc48 subfamily) FFA43_RS05065 PF10431 C-terminal, D2-small domain, of ClpB protein FFA43_RS05065 PF02861 Clp amino terminal domain, pathogenicity island component FFA43_RS05065 PF17871 AAA lid domain FFA43_RS05080 PF00005 ABC transporter FFA43_RS05090 PF07715 TonB-dependent Receptor Plug Domain FFA43_RS05100 PF03572 Peptidase family S41 FFA43_RS05100 PF13180 PDZ domain FFA43_RS05105 PF01259 SAICAR synthetase FFA43_RS05110 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FFA43_RS05125 PF01553 Acyltransferase FFA43_RS05130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FFA43_RS05150 PF03498 Cytolethal distending toxin A/C domain FFA43_RS05155 PF03372 Endonuclease/Exonuclease/phosphatase family FFA43_RS05170 PF01474 Class-II DAHP synthetase family FFA43_RS05180 PF00813 FliP family FFA43_RS05185 PF02801 Beta-ketoacyl synthase, C-terminal domain FFA43_RS05185 PF00109 Beta-ketoacyl synthase, N-terminal domain FFA43_RS05200 PF02801 Beta-ketoacyl synthase, C-terminal domain FFA43_RS05200 PF00109 Beta-ketoacyl synthase, N-terminal domain FFA43_RS05210 PF04820 Tryptophan halogenase FFA43_RS05230 PF03061 Thioesterase superfamily FFA43_RS05250 PF00550 Phosphopantetheine attachment site FFA43_RS05275 PF12804 MobA-like NTP transferase domain FFA43_RS05275 PF00132 Bacterial transferase hexapeptide (six repeats) FFA43_RS05280 PF04127 DNA / pantothenate metabolism flavoprotein FFA43_RS05280 PF02441 Flavoprotein FFA43_RS05290 PF01255 Putative undecaprenyl diphosphate synthase FFA43_RS05295 PF01478 Type IV leader peptidase family FFA43_RS05295 PF06750 Bacterial Peptidase A24 N-terminal domain FFA43_RS05305 PF01416 tRNA pseudouridine synthase FFA43_RS05310 PF13291 ACT domain FFA43_RS05310 PF00291 Pyridoxal-phosphate dependent enzyme FFA43_RS05320 PF04076 Bacterial OB fold (BOF) protein FFA43_RS05340 PF03461 TRCF domain FFA43_RS05340 PF02559 CarD-like/TRCF domain FFA43_RS05340 PF00271 Helicase conserved C-terminal domain FFA43_RS05340 PF00270 DEAD/DEAH box helicase FFA43_RS05340 PF17757 UvrB interaction domain FFA43_RS05350 PF04225 Opacity-associated protein A LysM-like domain FFA43_RS05350 PF01551 Peptidase family M23 FFA43_RS05360 PF00990 Diguanylate cyclase, GGDEF domain FFA43_RS05370 PF09334 tRNA synthetases class I (M) FFA43_RS05370 PF13603 Leucyl-tRNA synthetase, Domain 2 FFA43_RS05370 PF00133 tRNA synthetases class I (I, L, M and V) FFA43_RS05380 PF02355 Protein export membrane protein FFA43_RS05380 PF07549 SecD/SecF GG Motif FFA43_RS05385 PF02355 Protein export membrane protein FFA43_RS05390 PF02699 Preprotein translocase subunit FFA43_RS05400 PF00950 ABC 3 transport family FFA43_RS05405 PF00950 ABC 3 transport family FFA43_RS05410 PF00005 ABC transporter FFA43_RS05415 PF01297 Zinc-uptake complex component A periplasmic FFA43_RS05420 PF02773 S-adenosylmethionine synthetase, C-terminal domain FFA43_RS05420 PF02772 S-adenosylmethionine synthetase, central domain FFA43_RS05420 PF00438 S-adenosylmethionine synthetase, N-terminal domain FFA43_RS05425 PF00375 Sodium:dicarboxylate symporter family FFA43_RS05440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFA43_RS05445 PF13361 UvrD-like helicase C-terminal domain FFA43_RS05445 PF00580 UvrD/REP helicase N-terminal domain FFA43_RS05450 PF01509 TruB family pseudouridylate synthase (N terminal domain) FFA43_RS05455 PF02599 Global regulator protein family FFA43_RS05460 PF00288 GHMP kinases N terminal domain FFA43_RS05465 PF01668 SmpB protein FFA43_RS05475 PF02617 ATP-dependent Clp protease adaptor protein ClpS FFA43_RS05480 PF00004 ATPase family associated with various cellular activities (AAA) FFA43_RS05480 PF07724 AAA domain (Cdc48 subfamily) FFA43_RS05480 PF17871 AAA lid domain FFA43_RS05480 PF02861 Clp amino terminal domain, pathogenicity island component FFA43_RS05480 PF10431 C-terminal, D2-small domain, of ClpB protein FFA43_RS05490 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FFA43_RS05495 PF00460 Flagella basal body rod protein FFA43_RS05500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFA43_RS05500 PF00460 Flagella basal body rod protein FFA43_RS05505 PF02049 Flagellar hook-basal body complex protein FliE FFA43_RS05510 PF03717 Penicillin-binding Protein dimerisation domain FFA43_RS05510 PF00905 Penicillin binding protein transpeptidase domain FFA43_RS05515 PF00762 Ferrochelatase FFA43_RS05520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFA43_RS05520 PF02272 DHHA1 domain FFA43_RS05520 PF01411 tRNA synthetases class II (A) FFA43_RS05530 PF02545 Maf-like protein FFA43_RS05535 PF00905 Penicillin binding protein transpeptidase domain FFA43_RS05535 PF17092 Penicillin-binding protein OB-like domain FFA43_RS05535 PF00912 Transglycosylase FFA43_RS05545 PF01245 Ribosomal protein L19 FFA43_RS05550 PF01746 tRNA (Guanine-1)-methyltransferase FFA43_RS05555 PF05239 PRC-barrel domain FFA43_RS05555 PF01782 RimM N-terminal domain FFA43_RS05565 PF00886 Ribosomal protein S16 FFA43_RS05570 PF02881 SRP54-type protein, helical bundle domain FFA43_RS05570 PF02978 Signal peptide binding domain FFA43_RS05570 PF00448 SRP54-type protein, GTPase domain FFA43_RS05575 PF13545 Crp-like helix-turn-helix domain FFA43_RS05575 PF00027 Cyclic nucleotide-binding domain FFA43_RS05585 PF00005 ABC transporter FFA43_RS05600 PF01891 Cobalt uptake substrate-specific transmembrane region FFA43_RS05610 PF00849 RNA pseudouridylate synthase FFA43_RS05615 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FFA43_RS05615 PF02390 Putative methyltransferase FFA43_RS05625 PF01784 NIF3 (NGG1p interacting factor 3) FFA43_RS05630 PF02091 Glycyl-tRNA synthetase alpha subunit FFA43_RS05640 PF00731 AIR carboxylase FFA43_RS05645 PF01136 Peptidase family U32 FFA43_RS05655 PF02811 PHP domain FFA43_RS05660 PF00120 Glutamine synthetase, catalytic domain FFA43_RS05660 PF03951 Glutamine synthetase, beta-Grasp domain FFA43_RS05670 PF12796 Ankyrin repeats (3 copies) FFA43_RS05670 PF00023 Ankyrin repeat FFA43_RS05675 PF06628 Catalase-related immune-responsive FFA43_RS05675 PF00199 Catalase FFA43_RS05685 PF00004 ATPase family associated with various cellular activities (AAA) FFA43_RS05685 PF02190 ATP-dependent protease La (LON) substrate-binding domain FFA43_RS05685 PF05362 Lon protease (S16) C-terminal proteolytic domain FFA43_RS05690 PF13525 Outer membrane lipoprotein FFA43_RS05695 PF00271 Helicase conserved C-terminal domain FFA43_RS05695 PF04851 Type III restriction enzyme, res subunit FFA43_RS05700 PF05193 Peptidase M16 inactive domain FFA43_RS05700 PF00675 Insulinase (Peptidase family M16) FFA43_RS05705 PF00224 Pyruvate kinase, barrel domain FFA43_RS05705 PF00391 PEP-utilising enzyme, mobile domain FFA43_RS05705 PF02887 Pyruvate kinase, alpha/beta domain FFA43_RS05715 PF06039 Malate:quinone oxidoreductase (Mqo) FFA43_RS05720 PF07687 Peptidase dimerisation domain FFA43_RS05720 PF01546 Peptidase family M20/M25/M40 FFA43_RS05730 PF00563 EAL domain FFA43_RS05730 PF08495 FIST N domain FFA43_RS05730 PF00990 Diguanylate cyclase, GGDEF domain FFA43_RS05730 PF10442 FIST C domain FFA43_RS05735 PF00488 MutS domain V FFA43_RS05735 PF01713 Smr domain FFA43_RS05755 PF00528 Binding-protein-dependent transport system inner membrane component FFA43_RS05760 PF00005 ABC transporter FFA43_RS05770 PF08245 Mur ligase middle domain FFA43_RS05770 PF02875 Mur ligase family, glutamate ligase domain FFA43_RS05770 PF01225 Mur ligase family, catalytic domain FFA43_RS05785 PF05175 Methyltransferase small domain FFA43_RS05785 PF17827 PrmC N-terminal domain FFA43_RS05790 PF01435 Peptidase family M48 FFA43_RS05790 PF16491 CAAX prenyl protease N-terminal, five membrane helices FFA43_RS05795 PF00209 Sodium:neurotransmitter symporter family FFA43_RS05800 PF12848 ABC transporter FFA43_RS05800 PF16326 ABC transporter C-terminal domain FFA43_RS05800 PF00005 ABC transporter FFA43_RS05805 PF00083 Sugar (and other) transporter FFA43_RS05810 PF01740 STAS domain FFA43_RS05810 PF00916 Sulfate permease family FFA43_RS05815 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS05815 PF00072 Response regulator receiver domain FFA43_RS05820 PF07689 KaiB domain FFA43_RS05820 PF00512 His Kinase A (phospho-acceptor) domain FFA43_RS05820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS05825 PF01554 MatE FFA43_RS05835 PF03616 Sodium/glutamate symporter FFA43_RS05845 PF00795 Carbon-nitrogen hydrolase FFA43_RS05850 PF16916 Dimerisation domain of Zinc Transporter FFA43_RS05850 PF01545 Cation efflux family FFA43_RS05855 PF04371 Porphyromonas-type peptidyl-arginine deiminase FFA43_RS05860 PF00085 Thioredoxin FFA43_RS05865 PF02687 FtsX-like permease family FFA43_RS05865 PF00005 ABC transporter FFA43_RS05865 PF12704 MacB-like periplasmic core domain FFA43_RS05885 PF10634 Fe2+ transport protein FFA43_RS05890 PF03239 Iron permease FTR1 family FFA43_RS05895 PF00460 Flagella basal body rod protein FFA43_RS05895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFA43_RS05900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFA43_RS05900 PF00460 Flagella basal body rod protein FFA43_RS05905 PF04545 Sigma-70, region 4 FFA43_RS05905 PF04539 Sigma-70 region 3 FFA43_RS05905 PF04542 Sigma-70 region 2 FFA43_RS05905 PF00140 Sigma-70 factor, region 1.2 FFA43_RS05910 PF00669 Bacterial flagellin N-terminal helical region FFA43_RS05915 PF00815 Histidinol dehydrogenase FFA43_RS05935 PF01116 Fructose-bisphosphate aldolase class-II FFA43_RS05945 PF00633 Helix-hairpin-helix motif FFA43_RS05945 PF00730 HhH-GPD superfamily base excision DNA repair protein FFA43_RS05945 PF10576 Iron-sulfur binding domain of endonuclease III FFA43_RS05950 PF00202 Aminotransferase class-III FFA43_RS05955 PF01867 CRISPR associated protein Cas1 FFA43_RS05970 PF18019 HD domain FFA43_RS05970 PF00270 DEAD/DEAH box helicase FFA43_RS05970 PF00271 Helicase conserved C-terminal domain FFA43_RS05995 PF10531 SLBB domain FFA43_RS06025 PF09335 SNARE associated Golgi protein FFA43_RS06035 PF01966 HD domain FFA43_RS06035 PF12072 Domain of unknown function (DUF3552) FFA43_RS06045 PF00578 AhpC/TSA family FFA43_RS06050 PF00448 SRP54-type protein, GTPase domain FFA43_RS06055 PF18073 Rubredoxin metal binding domain FFA43_RS06120 PF02548 Ketopantoate hydroxymethyltransferase FFA43_RS06130 PF17864 RuvB AAA lid domain FFA43_RS06130 PF05491 RuvB C-terminal winged helix domain FFA43_RS06130 PF05496 Holliday junction DNA helicase RuvB P-loop domain FFA43_RS06135 PF01594 AI-2E family transporter FFA43_RS06140 PF02405 Permease MlaE FFA43_RS06145 PF00005 ABC transporter FFA43_RS06160 PF02130 Uncharacterized protein family UPF0054 FFA43_RS06175 PF02130 Uncharacterized protein family UPF0054 FFA43_RS06190 PF00474 Sodium:solute symporter family FFA43_RS06195 PF00528 Binding-protein-dependent transport system inner membrane component FFA43_RS06200 PF00005 ABC transporter FFA43_RS06205 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFA43_RS06210 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFA43_RS06215 PF02581 Thiamine monophosphate synthase FFA43_RS06220 PF02673 Bacitracin resistance protein BacA FFA43_RS06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS06235 PF00512 His Kinase A (phospho-acceptor) domain FFA43_RS06245 PF07733 Bacterial DNA polymerase III alpha NTPase domain FFA43_RS06245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FFA43_RS06245 PF02811 PHP domain FFA43_RS06245 PF14579 Helix-hairpin-helix motif FFA43_RS06250 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FFA43_RS06255 PF03264 NapC/NirT cytochrome c family, N-terminal region FFA43_RS06260 PF02335 Cytochrome c552 FFA43_RS06265 PF01965 DJ-1/PfpI family FFA43_RS06280 PF08207 Elongation factor P (EF-P) KOW-like domain FFA43_RS06280 PF09285 Elongation factor P, C-terminal FFA43_RS06280 PF01132 Elongation factor P (EF-P) OB domain FFA43_RS06285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFA43_RS06285 PF01842 ACT domain FFA43_RS06285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFA43_RS06295 PF00575 S1 RNA binding domain FFA43_RS06300 PF02401 LytB protein FFA43_RS06305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFA43_RS06310 PF01588 Putative tRNA binding domain FFA43_RS06310 PF03147 Ferredoxin-fold anticodon binding domain FFA43_RS06310 PF03484 tRNA synthetase B5 domain FFA43_RS06310 PF03483 B3/4 domain FFA43_RS06310 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FFA43_RS06315 PF01409 tRNA synthetases class II core domain (F) FFA43_RS06315 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FFA43_RS06320 PF01230 HIT domain FFA43_RS06330 PF03725 3' exoribonuclease family, domain 2 FFA43_RS06330 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FFA43_RS06330 PF00013 KH domain FFA43_RS06330 PF00575 S1 RNA binding domain FFA43_RS06330 PF01138 3' exoribonuclease family, domain 1 FFA43_RS06350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FFA43_RS06350 PF02843 Phosphoribosylglycinamide synthetase, C domain FFA43_RS06350 PF02844 Phosphoribosylglycinamide synthetase, N domain FFA43_RS06365 PF00958 GMP synthase C terminal domain FFA43_RS06365 PF02540 NAD synthase FFA43_RS06365 PF00117 Glutamine amidotransferase class-I FFA43_RS06375 PF01541 GIY-YIG catalytic domain FFA43_RS06375 PF08459 UvrC Helix-hairpin-helix N-terminal FFA43_RS06375 PF02151 UvrB/uvrC motif FFA43_RS06385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FFA43_RS06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS06385 PF00512 His Kinase A (phospho-acceptor) domain FFA43_RS06385 PF00072 Response regulator receiver domain FFA43_RS06385 PF01627 Hpt domain FFA43_RS06385 PF00672 HAMP domain FFA43_RS06390 PF00072 Response regulator receiver domain FFA43_RS06390 PF01339 CheB methylesterase FFA43_RS06440 PF03061 Thioesterase superfamily FFA43_RS06445 PF01641 SelR domain FFA43_RS06445 PF01625 Peptide methionine sulfoxide reductase FFA43_RS06455 PF00137 ATP synthase subunit C FFA43_RS06505 PF00465 Iron-containing alcohol dehydrogenase FFA43_RS06510 PF00209 Sodium:neurotransmitter symporter family FFA43_RS06515 PF00364 Biotin-requiring enzyme FFA43_RS06515 PF00682 HMGL-like FFA43_RS06515 PF02436 Conserved carboxylase domain FFA43_RS06520 PF01293 Phosphoenolpyruvate carboxykinase FFA43_RS06525 PF00206 Lyase FFA43_RS06525 PF14698 Argininosuccinate lyase C-terminal FFA43_RS06530 PF05227 CHASE3 domain FFA43_RS06530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS06530 PF00672 HAMP domain FFA43_RS06535 PF02583 Metal-sensitive transcriptional repressor FFA43_RS06540 PF01545 Cation efflux family FFA43_RS06540 PF16916 Dimerisation domain of Zinc Transporter FFA43_RS06550 PF02421 Ferrous iron transport protein B FFA43_RS06550 PF07664 Ferrous iron transport protein B C terminus FFA43_RS06550 PF07670 Nucleoside recognition FFA43_RS06565 PF14492 Elongation Factor G, domain II FFA43_RS06565 PF03144 Elongation factor Tu domain 2 FFA43_RS06565 PF03764 Elongation factor G, domain IV FFA43_RS06565 PF00679 Elongation factor G C-terminus FFA43_RS06565 PF00009 Elongation factor Tu GTP binding domain FFA43_RS06570 PF00177 Ribosomal protein S7p/S5e FFA43_RS06575 PF00164 Ribosomal protein S12/S23 FFA43_RS06580 PF04997 RNA polymerase Rpb1, domain 1 FFA43_RS06580 PF04983 RNA polymerase Rpb1, domain 3 FFA43_RS06580 PF05000 RNA polymerase Rpb1, domain 4 FFA43_RS06580 PF04998 RNA polymerase Rpb1, domain 5 FFA43_RS06580 PF00623 RNA polymerase Rpb1, domain 2 FFA43_RS06585 PF04560 RNA polymerase Rpb2, domain 7 FFA43_RS06585 PF04563 RNA polymerase beta subunit FFA43_RS06585 PF04561 RNA polymerase Rpb2, domain 2 FFA43_RS06585 PF04565 RNA polymerase Rpb2, domain 3 FFA43_RS06585 PF10385 RNA polymerase beta subunit external 1 domain FFA43_RS06585 PF00562 RNA polymerase Rpb2, domain 6 FFA43_RS06590 PF16320 Ribosomal protein L7/L12 dimerisation domain FFA43_RS06590 PF00542 Ribosomal protein L7/L12 C-terminal domain FFA43_RS06595 PF00466 Ribosomal protein L10 FFA43_RS06600 PF00687 Ribosomal protein L1p/L10e family FFA43_RS06605 PF03946 Ribosomal protein L11, N-terminal domain FFA43_RS06605 PF00298 Ribosomal protein L11, RNA binding domain FFA43_RS06610 PF02357 Transcription termination factor nusG FFA43_RS06625 PF00471 Ribosomal protein L33 FFA43_RS06630 PF03144 Elongation factor Tu domain 2 FFA43_RS06630 PF00009 Elongation factor Tu GTP binding domain FFA43_RS06630 PF03143 Elongation factor Tu C-terminal domain FFA43_RS06660 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FFA43_RS06665 PF01029 NusB family FFA43_RS06670 PF00885 6,7-dimethyl-8-ribityllumazine synthase FFA43_RS06675 PF00893 Small Multidrug Resistance protein FFA43_RS06685 PF00793 DAHP synthetase I family FFA43_RS06690 PF00892 EamA-like transporter family FFA43_RS06695 PF01926 50S ribosome-binding GTPase FFA43_RS06695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FFA43_RS06700 PF01202 Shikimate kinase FFA43_RS06705 PF00579 tRNA synthetases class I (W and Y) FFA43_RS06710 PF02403 Seryl-tRNA synthetase N-terminal domain FFA43_RS06710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFA43_RS06720 PF00682 HMGL-like FFA43_RS06720 PF08502 LeuA allosteric (dimerisation) domain FFA43_RS06725 PF01066 CDP-alcohol phosphatidyltransferase FFA43_RS06735 PF01434 Peptidase family M41 FFA43_RS06735 PF00004 ATPase family associated with various cellular activities (AAA) FFA43_RS06735 PF17862 AAA+ lid domain FFA43_RS06745 PF00072 Response regulator receiver domain FFA43_RS06750 PF00977 Histidine biosynthesis protein FFA43_RS06755 PF00117 Glutamine amidotransferase class-I FFA43_RS06765 PF02719 Polysaccharide biosynthesis protein FFA43_RS06770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFA43_RS06795 PF00501 AMP-binding enzyme FFA43_RS06795 PF13193 AMP-binding enzyme C-terminal domain FFA43_RS06800 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FFA43_RS06800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FFA43_RS06810 PF01555 DNA methylase FFA43_RS06820 PF08245 Mur ligase middle domain FFA43_RS06825 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FFA43_RS06825 PF00953 Glycosyl transferase family 4 FFA43_RS06830 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FFA43_RS06830 PF01676 Metalloenzyme superfamily FFA43_RS06850 PF00550 Phosphopantetheine attachment site FFA43_RS06855 PF00109 Beta-ketoacyl synthase, N-terminal domain FFA43_RS06855 PF02801 Beta-ketoacyl synthase, C-terminal domain FFA43_RS06860 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FFA43_RS06875 PF03462 PCRF domain FFA43_RS06875 PF00472 RF-1 domain FFA43_RS06880 PF02569 Pantoate-beta-alanine ligase FFA43_RS06885 PF00919 Uncharacterized protein family UPF0004 FFA43_RS06885 PF04055 Radical SAM superfamily FFA43_RS06885 PF18693 TRAM domain FFA43_RS06890 PF01171 PP-loop family FFA43_RS06910 PF04028 Domain of unknown function (DUF374) FFA43_RS06915 PF01938 TRAM domain FFA43_RS06915 PF04055 Radical SAM superfamily FFA43_RS06915 PF00919 Uncharacterized protein family UPF0004 FFA43_RS06925 PF08529 NusA N-terminal domain FFA43_RS06925 PF13184 NusA-like KH domain FFA43_RS06930 PF00672 HAMP domain FFA43_RS06930 PF02743 Cache domain FFA43_RS06930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS06935 PF09186 Domain of unknown function (DUF1949) FFA43_RS06935 PF01205 Uncharacterized protein family UPF0029 FFA43_RS06940 PF04055 Radical SAM superfamily FFA43_RS06940 PF06968 Biotin and Thiamin Synthesis associated domain FFA43_RS06945 PF05690 Thiazole biosynthesis protein ThiG FFA43_RS06950 PF00899 ThiF family FFA43_RS06955 PF00939 Sodium:sulfate symporter transmembrane region FFA43_RS06965 PF00890 FAD binding domain FFA43_RS06965 PF04205 FMN-binding domain FFA43_RS06975 PF07729 FCD domain FFA43_RS06975 PF00392 Bacterial regulatory proteins, gntR family FFA43_RS06995 PF13722 5TM C-terminal transporter carbon starvation CstA FFA43_RS06995 PF02554 Carbon starvation protein CstA FFA43_RS07010 PF12848 ABC transporter FFA43_RS07010 PF00005 ABC transporter FFA43_RS07015 PF14602 Hexapeptide repeat of succinyl-transferase FFA43_RS07015 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FFA43_RS07020 PF01883 Iron-sulfur cluster assembly protein FFA43_RS07020 PF10609 NUBPL iron-transfer P-loop NTPase FFA43_RS07025 PF01964 Radical SAM ThiC family FFA43_RS07030 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FFA43_RS07030 PF02542 YgbB family FFA43_RS07035 PF00072 Response regulator receiver domain FFA43_RS07035 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS07045 PF04608 Phosphatidylglycerophosphatase A FFA43_RS07055 PF05140 ResB-like family FFA43_RS07055 PF01578 Cytochrome C assembly protein FFA43_RS07060 PF00005 ABC transporter FFA43_RS07065 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFA43_RS07065 PF00005 ABC transporter FFA43_RS07070 PF11862 Domain of unknown function (DUF3382) FFA43_RS07070 PF02653 Branched-chain amino acid transport system / permease component FFA43_RS07075 PF02653 Branched-chain amino acid transport system / permease component FFA43_RS07080 PF13458 Periplasmic binding protein FFA43_RS07085 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FFA43_RS07085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFA43_RS07090 PF05538 Campylobacter major outer membrane protein FFA43_RS07095 PF05538 Campylobacter major outer membrane protein FFA43_RS07110 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FFA43_RS07110 PF10371 Domain of unknown function FFA43_RS07110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFA43_RS07110 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FFA43_RS07110 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FFA43_RS07115 PF13419 Haloacid dehalogenase-like hydrolase FFA43_RS07120 PF05552 Conserved TM helix FFA43_RS07120 PF00924 Mechanosensitive ion channel FFA43_RS07125 PF05736 OprF membrane domain FFA43_RS07125 PF00691 OmpA family FFA43_RS07130 PF00380 Ribosomal protein S9/S16 FFA43_RS07135 PF00572 Ribosomal protein L13 FFA43_RS07140 PF12705 PD-(D/E)XK nuclease superfamily FFA43_RS07140 PF00580 UvrD/REP helicase N-terminal domain FFA43_RS07140 PF13361 UvrD-like helicase C-terminal domain FFA43_RS07165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFA43_RS07165 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FFA43_RS07180 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFA43_RS07185 PF00072 Response regulator receiver domain FFA43_RS07185 PF00486 Transcriptional regulatory protein, C terminal FFA43_RS07190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS07190 PF08447 PAS fold FFA43_RS07200 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FFA43_RS07200 PF00117 Glutamine amidotransferase class-I FFA43_RS07225 PF00709 Adenylosuccinate synthetase FFA43_RS07230 PF13393 Histidyl-tRNA synthetase FFA43_RS07235 PF00990 Diguanylate cyclase, GGDEF domain FFA43_RS07235 PF00563 EAL domain FFA43_RS07235 PF03707 Bacterial signalling protein N terminal repeat FFA43_RS07265 PF03459 TOBE domain FFA43_RS07280 PF00005 ABC transporter FFA43_RS07280 PF08402 TOBE domain FFA43_RS07285 PF00528 Binding-protein-dependent transport system inner membrane component FFA43_RS07300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFA43_RS07300 PF04509 CheC-like family FFA43_RS07310 PF00290 Tryptophan synthase alpha chain FFA43_RS07315 PF00291 Pyridoxal-phosphate dependent enzyme FFA43_RS07320 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FFA43_RS07325 PF00117 Glutamine amidotransferase class-I FFA43_RS07325 PF02885 Glycosyl transferase family, helical bundle domain FFA43_RS07325 PF00591 Glycosyl transferase family, a/b domain FFA43_RS07330 PF00425 chorismate binding enzyme FFA43_RS07330 PF04715 Anthranilate synthase component I, N terminal region FFA43_RS07340 PF00939 Sodium:sulfate symporter transmembrane region FFA43_RS07345 PF17760 UvrA interaction domain FFA43_RS07345 PF17755 UvrA DNA-binding domain FFA43_RS07345 PF00005 ABC transporter FFA43_RS07350 PF06965 Na+/H+ antiporter 1 FFA43_RS07355 PF01312 FlhB HrpN YscU SpaS Family FFA43_RS07360 PF00881 Nitroreductase family FFA43_RS07365 PF00586 AIR synthase related protein, N-terminal domain FFA43_RS07365 PF02769 AIR synthase related protein, C-terminal domain FFA43_RS07375 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FFA43_RS07380 PF01195 Peptidyl-tRNA hydrolase FFA43_RS07385 PF01386 Ribosomal L25p family FFA43_RS07385 PF14693 Ribosomal protein TL5, C-terminal domain FFA43_RS07390 PF00437 Type II/IV secretion system protein FFA43_RS07395 PF00923 Transaldolase/Fructose-6-phosphate aldolase FFA43_RS07405 PF01584 CheW-like domain FFA43_RS07410 PF00072 Response regulator receiver domain FFA43_RS07410 PF02895 Signal transducing histidine kinase, homodimeric domain FFA43_RS07410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFA43_RS07410 PF01584 CheW-like domain FFA43_RS07410 PF01627 Hpt domain FFA43_RS07415 PF00072 Response regulator receiver domain FFA43_RS07415 PF01584 CheW-like domain FFA43_RS07425 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFA43_RS07425 PF02774 Semialdehyde dehydrogenase, dimerisation domain FFA43_RS07430 PF01272 Transcription elongation factor, GreA/GreB, C-term FFA43_RS07430 PF03449 Transcription elongation factor, N-terminal FFA43_RS07435 PF02684 Lipid-A-disaccharide synthetase FFA43_RS07440 PF01975 Survival protein SurE FFA43_RS07445 PF00899 ThiF family FFA43_RS07465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFA43_RS07465 PF02142 MGS-like domain FFA43_RS07465 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FFA43_RS07480 PF06689 ClpX C4-type zinc finger FFA43_RS07480 PF07724 AAA domain (Cdc48 subfamily) FFA43_RS07480 PF10431 C-terminal, D2-small domain, of ClpB protein FFA43_RS07485 PF00132 Bacterial transferase hexapeptide (six repeats) FFA43_RS07485 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FFA43_RS07490 PF07977 FabA-like domain FFA43_RS07505 PF07690 Major Facilitator Superfamily FFA43_RS07515 PF04055 Radical SAM superfamily FFA43_RS07520 PF01208 Uroporphyrinogen decarboxylase (URO-D) FFA43_RS07530 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFA43_RS07530 PF02774 Semialdehyde dehydrogenase, dimerisation domain FFA43_RS07535 PF00072 Response regulator receiver domain FFA43_RS07535 PF00158 Sigma-54 interaction domain FFA43_RS07550 PF00521 DNA gyrase/topoisomerase IV, subunit A FFA43_RS07550 PF03989 DNA gyrase C-terminal domain, beta-propeller FFA43_RS07555 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFA43_RS07555 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFA43_RS07575 PF00501 AMP-binding enzyme FFA43_RS07575 PF13193 AMP-binding enzyme C-terminal domain FFA43_RS07600 PF01361 Tautomerase enzyme FFA43_RS07605 PF03144 Elongation factor Tu domain 2 FFA43_RS07605 PF06421 GTP-binding protein LepA C-terminus FFA43_RS07605 PF00679 Elongation factor G C-terminus FFA43_RS07605 PF00009 Elongation factor Tu GTP binding domain FFA43_RS07610 PF14572 Phosphoribosyl synthetase-associated domain FFA43_RS07610 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FFA43_RS07615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFA43_RS07615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFA43_RS07620 PF01979 Amidohydrolase family FFA43_RS07625 PF07963 Prokaryotic N-terminal methylation motif FFA43_RS07625 PF08334 Type II secretion system (T2SS), protein G FFA43_RS07630 PF07963 Prokaryotic N-terminal methylation motif FFA43_RS07630 PF08334 Type II secretion system (T2SS), protein G FFA43_RS07645 PF03641 Possible lysine decarboxylase FFA43_RS07650 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFA43_RS07650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FFA43_RS07655 PF04898 Glutamate synthase central domain FFA43_RS07655 PF01645 Conserved region in glutamate synthase FFA43_RS07655 PF01493 GXGXG motif FFA43_RS07655 PF00310 Glutamine amidotransferases class-II FFA43_RS07660 PF01872 RibD C-terminal domain FFA43_RS07660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FFA43_RS07670 PF02576 RimP N-terminal domain FFA43_RS07670 PF17384 RimP C-terminal SH3 domain FFA43_RS07675 PF02033 Ribosome-binding factor A FFA43_RS07680 PF00009 Elongation factor Tu GTP binding domain FFA43_RS07680 PF11987 Translation-initiation factor 2 FFA43_RS07680 PF04760 Translation initiation factor IF-2, N-terminal region FFA43_RS07690 PF00288 GHMP kinases N terminal domain FFA43_RS07700 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FFA43_RS07705 PF02567 Phenazine biosynthesis-like protein FFA43_RS07715 PF02153 Prephenate dehydrogenase FFA43_RS07715 PF01842 ACT domain FFA43_RS07720 PF07244 Surface antigen variable number repeat FFA43_RS07720 PF01103 Surface antigen FFA43_RS07725 PF03473 MOSC domain FFA43_RS07730 PF01343 Peptidase family S49 FFA43_RS07735 PF01979 Amidohydrolase family FFA43_RS07740 PF01220 Dehydroquinase class II FFA43_RS07745 PF01321 Creatinase/Prolidase N-terminal domain FFA43_RS07745 PF00557 Metallopeptidase family M24 FFA43_RS07750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FFA43_RS07755 PF00448 SRP54-type protein, GTPase domain FFA43_RS07760 PF10609 NUBPL iron-transfer P-loop NTPase FFA43_RS07770 PF04542 Sigma-70 region 2 FFA43_RS07770 PF04539 Sigma-70 region 3 FFA43_RS07770 PF04545 Sigma-70, region 4 FFA43_RS07775 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFA43_RS07775 PF02154 Flagellar motor switch protein FliM FFA43_RS07780 PF04509 CheC-like family FFA43_RS07780 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFA43_RS07785 PF01171 PP-loop family FFA43_RS07790 PF01048 Phosphorylase superfamily FFA43_RS07795 PF00698 Acyl transferase domain FFA43_RS07800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFA43_RS07810 PF00691 OmpA family FFA43_RS07825 PF02472 Biopolymer transport protein ExbD/TolR FFA43_RS07830 PF01618 MotA/TolQ/ExbB proton channel family FFA43_RS07835 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FFA43_RS07840 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFA43_RS07840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFA43_RS07845 PF00231 ATP synthase FFA43_RS07850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFA43_RS07850 PF00306 ATP synthase alpha/beta chain, C terminal domain FFA43_RS07850 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFA43_RS07855 PF00213 ATP synthase delta (OSCP) subunit FFA43_RS07860 PF00430 ATP synthase B/B' CF(0) FFA43_RS07865 PF00430 ATP synthase B/B' CF(0) FFA43_RS07870 PF02195 ParB-like nuclease domain FFA43_RS07870 PF17762 HTH domain found in ParB protein FFA43_RS07875 PF13614 AAA domain FFA43_RS07880 PF02237 Biotin protein ligase C terminal domain FFA43_RS07880 PF08279 HTH domain FFA43_RS07880 PF03099 Biotin/lipoate A/B protein ligase family FFA43_RS07885 PF02911 Formyl transferase, C-terminal domain FFA43_RS07885 PF00551 Formyl transferase FFA43_RS07890 PF00696 Amino acid kinase family FFA43_RS07895 PF01018 GTP1/OBG FFA43_RS07895 PF01926 50S ribosome-binding GTPase FFA43_RS07900 PF01016 Ribosomal L27 protein FFA43_RS07905 PF00829 Ribosomal prokaryotic L21 protein FFA43_RS07920 PF03150 Di-haem cytochrome c peroxidase FFA43_RS07920 PF00034 Cytochrome c FFA43_RS07925 PF13247 4Fe-4S dicluster domain FFA43_RS07950 PF03841 L-seryl-tRNA selenium transferase FFA43_RS07955 PF09107 Elongation factor SelB, winged helix FFA43_RS07955 PF09106 Elongation factor SelB, winged helix FFA43_RS07955 PF09105 Elongation factor SelB, winged helix FFA43_RS07955 PF03144 Elongation factor Tu domain 2 FFA43_RS07955 PF00009 Elongation factor Tu GTP binding domain FFA43_RS07965 PF02348 Cytidylyltransferase FFA43_RS07995 PF03102 NeuB family FFA43_RS07995 PF08666 SAF domain FFA43_RS08000 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FFA43_RS08000 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FFA43_RS08005 PF02621 Menaquinone biosynthesis FFA43_RS08020 PF00390 Malic enzyme, N-terminal domain FFA43_RS08020 PF03949 Malic enzyme, NAD binding domain FFA43_RS08020 PF01515 Phosphate acetyl/butaryl transferase FFA43_RS08025 PF00749 tRNA synthetases class I (E and Q), catalytic domain FFA43_RS08035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFA43_RS08035 PF00289 Biotin carboxylase, N-terminal domain FFA43_RS08035 PF02785 Biotin carboxylase C-terminal domain FFA43_RS08040 PF00364 Biotin-requiring enzyme FFA43_RS08045 PF00528 Binding-protein-dependent transport system inner membrane component FFA43_RS08055 PF00692 dUTPase FFA43_RS08060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFA43_RS08075 PF06969 HemN C-terminal domain FFA43_RS08075 PF04055 Radical SAM superfamily FFA43_RS08080 PF10788 Protein of unknown function (DUF2603) FFA43_RS08085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFA43_RS08085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFA43_RS08090 PF00490 Delta-aminolevulinic acid dehydratase FFA43_RS08095 PF00925 GTP cyclohydrolase II FFA43_RS08100 PF02527 rRNA small subunit methyltransferase G FFA43_RS08115 PF01435 Peptidase family M48 FFA43_RS08120 PF00842 Alanine racemase, C-terminal domain FFA43_RS08120 PF01168 Alanine racemase, N-terminal domain FFA43_RS08135 PF04314 Copper chaperone PCu(A)C FFA43_RS08140 PF02719 Polysaccharide biosynthesis protein FFA43_RS08145 PF13302 Acetyltransferase (GNAT) domain FFA43_RS08150 PF00669 Bacterial flagellin N-terminal helical region FFA43_RS08150 PF00700 Bacterial flagellin C-terminal helical region FFA43_RS08150 PF07196 Flagellin hook IN motif FFA43_RS08160 PF00669 Bacterial flagellin N-terminal helical region FFA43_RS08160 PF07196 Flagellin hook IN motif FFA43_RS08160 PF00700 Bacterial flagellin C-terminal helical region FFA43_RS08165 PF13847 Methyltransferase domain FFA43_RS08165 PF10119 Predicted methyltransferase regulatory domain FFA43_RS08180 PF03605 Anaerobic c4-dicarboxylate membrane transporter FFA43_RS08185 PF00206 Lyase FFA43_RS08185 PF10415 Fumarase C C-terminus FFA43_RS08190 PF00082 Subtilase family FFA43_RS08190 PF03797 Autotransporter beta-domain FFA43_RS08190 PF12951 Passenger-associated-transport-repeat FFA43_RS08195 PF01594 AI-2E family transporter FFA43_RS08200 PF01925 Sulfite exporter TauE/SafE FFA43_RS08215 PF01261 Xylose isomerase-like TIM barrel FFA43_RS08225 PF13193 AMP-binding enzyme C-terminal domain FFA43_RS08225 PF00501 AMP-binding enzyme FFA43_RS08230 PF17862 AAA+ lid domain FFA43_RS08230 PF01434 Peptidase family M41 FFA43_RS08230 PF00004 ATPase family associated with various cellular activities (AAA) FFA43_RS08240 PF04055 Radical SAM superfamily FFA43_RS08240 PF06969 HemN C-terminal domain FFA43_RS08250 PF04461 Protein of unknown function (DUF520) FFA43_RS08255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFA43_RS08255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFA43_RS08260 PF02441 Flavoprotein FFA43_RS08265 PF03738 Glutathionylspermidine synthase preATP-grasp FFA43_RS08290 PF07715 TonB-dependent Receptor Plug Domain FFA43_RS08290 PF00593 TonB dependent receptor FFA43_RS08295 PF01618 MotA/TolQ/ExbB proton channel family FFA43_RS08300 PF02472 Biopolymer transport protein ExbD/TolR FFA43_RS08305 PF03544 Gram-negative bacterial TonB protein C-terminal FFA43_RS08310 PF18766 SWI2/SNF2 ATPase FFA43_RS08310 PF12008 Type I restriction and modification enzyme - subunit R C terminal FFA43_RS08310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FFA43_RS08330 PF02384 N-6 DNA Methylase FFA43_RS08330 PF12161 HsdM N-terminal domain FFA43_RS08335 PF00080 Copper/zinc superoxide dismutase (SODC) FFA43_RS08365 PF03741 Integral membrane protein TerC family FFA43_RS08370 PF00551 Formyl transferase FFA43_RS08375 PF03853 YjeF-related protein N-terminus FFA43_RS08375 PF01256 Carbohydrate kinase FFA43_RS08380 PF01078 Magnesium chelatase, subunit ChlI FFA43_RS08380 PF13335 Magnesium chelatase, subunit ChlI C-terminal FFA43_RS08385 PF01327 Polypeptide deformylase FFA43_RS08395 PF00574 Clp protease FFA43_RS08400 PF05698 Bacterial trigger factor protein (TF) C-terminus FFA43_RS08400 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFA43_RS08400 PF05697 Bacterial trigger factor protein (TF) FFA43_RS08405 PF01227 GTP cyclohydrolase I FFA43_RS08410 PF18269 T3SS EscN ATPase C-terminal domain FFA43_RS08410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFA43_RS08415 PF00266 Aminotransferase class-V FFA43_RS08420 PF01106 NifU-like domain FFA43_RS08420 PF01592 NifU-like N terminal domain FFA43_RS08420 PF04324 BFD-like [2Fe-2S] binding domain FFA43_RS08430 PF01814 Hemerythrin HHE cation binding domain FFA43_RS08435 PF00707 Translation initiation factor IF-3, C-terminal domain FFA43_RS08435 PF05198 Translation initiation factor IF-3, N-terminal domain FFA43_RS08440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFA43_RS08440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFA43_RS08440 PF03129 Anticodon binding domain FFA43_RS08460 PF03653 Uncharacterised protein family (UPF0093) FFA43_RS08470 PF01252 Signal peptidase (SPase) II FFA43_RS08475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FFA43_RS08475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FFA43_RS08475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FFA43_RS08475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FFA43_RS08480 PF01649 Ribosomal protein S20 FFA43_RS08485 PF03462 PCRF domain FFA43_RS08485 PF00472 RF-1 domain FFA43_RS08495 PF04237 YjbR FFA43_RS08505 PF03372 Endonuclease/Exonuclease/phosphatase family FFA43_RS08510 PF00884 Sulfatase FFA43_RS08510 PF08019 Phosphoethanolamine transferase EptA/EptB FFA43_RS08525 PF02659 Putative manganese efflux pump FFA43_RS08535 PF00950 ABC 3 transport family FFA43_RS08540 PF00005 ABC transporter FFA43_RS08550 PF01297 Zinc-uptake complex component A periplasmic FFA43_RS08560 PF05958 tRNA (Uracil-5-)-methyltransferase FFA43_RS08560 PF01938 TRAM domain FFA43_RS08565 PF14376 Haem-binding domain FFA43_RS08565 PF00034 Cytochrome c FFA43_RS08565 PF03150 Di-haem cytochrome c peroxidase FFA43_RS08570 PF00563 EAL domain FFA43_RS08570 PF00990 Diguanylate cyclase, GGDEF domain FFA43_RS08570 PF03707 Bacterial signalling protein N terminal repeat FFA43_RS08570 PF13188 PAS domain FFA43_RS08575 PF00484 Carbonic anhydrase FFA43_RS08580 PF00924 Mechanosensitive ion channel FFA43_RS08585 PF01264 Chorismate synthase FFA43_RS08590 PF14622 Ribonuclease-III-like FFA43_RS08590 PF00035 Double-stranded RNA binding motif FFA43_RS08595 PF00075 RNase H FFA43_RS08605 PF01807 CHC2 zinc finger FFA43_RS08605 PF08275 DNA primase catalytic core, N-terminal domain FFA43_RS08635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFA43_RS08635 PF00672 HAMP domain FFA43_RS08635 PF12729 Four helix bundle sensory module for signal transduction FFA43_RS08645 PF13726 Na+-H+ antiporter family FFA43_RS08645 PF03553 Na+/H+ antiporter family FFA43_RS08650 PF03222 Tryptophan/tyrosine permease family FFA43_RS08655 PF00920 Dehydratase family FFA43_RS08665 PF06418 CTP synthase N-terminus FFA43_RS08665 PF00117 Glutamine amidotransferase class-I FFA43_RS08670 PF17768 RecJ OB domain FFA43_RS08670 PF02272 DHHA1 domain FFA43_RS08670 PF01368 DHH family FFA43_RS08675 PF06965 Na+/H+ antiporter 1 FFA43_RS08680 PF10615 Protein of unknown function (DUF2470) FFA43_RS08680 PF01243 Pyridoxamine 5'-phosphate oxidase FFA43_RS08695 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFA43_RS08695 PF00460 Flagella basal body rod protein FFA43_RS08695 PF07196 Flagellin hook IN motif FFA43_RS08695 PF07559 Flagellar basal body protein FlaE FFA43_RS08705 PF01678 Diaminopimelate epimerase FFA43_RS08710 PF01121 Dephospho-CoA kinase FFA43_RS08715 PF01042 Endoribonuclease L-PSP FFA43_RS08720 PF00586 AIR synthase related protein, N-terminal domain FFA43_RS08720 PF02769 AIR synthase related protein, C-terminal domain FFA43_RS08725 PF05496 Holliday junction DNA helicase RuvB P-loop domain FFA43_RS08725 PF12002 MgsA AAA+ ATPase C terminal FFA43_RS08725 PF01661 Macro domain FFA43_RS08725 PF16193 AAA C-terminal domain FFA43_RS08730 PF00892 EamA-like transporter family FFA43_RS08735 PF08534 Redoxin FFA43_RS08745 PF00156 Phosphoribosyl transferase domain FFA43_RS08750 PF01765 Ribosome recycling factor FFA43_RS08760 PF03840 Preprotein translocase SecG subunit FFA43_RS08765 PF01027 Inhibitor of apoptosis-promoting Bax1 FFA43_RS08770 PF02525 Flavodoxin-like fold FFA43_RS08785 PF02525 Flavodoxin-like fold FFA43_RS08825 PF13356 Arm DNA-binding domain FFA43_RS08825 PF14659 Phage integrase, N-terminal SAM-like domain FFA43_RS08825 PF00589 Phage integrase family FFA43_RS08855 PF02525 Flavodoxin-like fold FFA43_RS08865 PF00106 short chain dehydrogenase FFA43_RS08890 PF13411 MerR HTH family regulatory protein FFA43_RS08895 PF02511 Thymidylate synthase complementing protein FFA43_RS08900 PF05199 GMC oxidoreductase FFA43_RS08900 PF00732 GMC oxidoreductase FFA43_RS08920 PF00881 Nitroreductase family FFA43_RS08935 PF00849 RNA pseudouridylate synthase FFA43_RS08935 PF01479 S4 domain FFA43_RS08940 PF01380 SIS domain FFA43_RS08940 PF00571 CBS domain FFA43_RS08945 PF00753 Metallo-beta-lactamase superfamily FFA43_RS08945 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FFA43_RS08945 PF17770 Ribonuclease J C-terminal domain FFA43_RS08950 PF00398 Ribosomal RNA adenine dimethylase FFA43_RS08955 PF05977 Transmembrane secretion effector FFA43_RS08960 PF00977 Histidine biosynthesis protein FFA43_RS08970 PF04055 Radical SAM superfamily FFA43_RS08980 PF00849 RNA pseudouridylate synthase FFA43_RS08985 PF10397 Adenylosuccinate lyase C-terminus FFA43_RS08985 PF00206 Lyase FFA43_RS08990 PF02867 Ribonucleotide reductase, barrel domain FFA43_RS08990 PF03477 ATP cone domain FFA43_RS08990 PF00317 Ribonucleotide reductase, all-alpha domain FFA43_RS08995 PF00324 Amino acid permease FFA43_RS09000 PF02075 Crossover junction endodeoxyribonuclease RuvC FFA43_RS09055 PF01381 Helix-turn-helix