locus-tag class description BKM79_RS00005 PF11638 DnaA N-terminal domain BKM79_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix BKM79_RS00005 PF00308 Bacterial dnaA protein BKM79_RS00015 PF00204 DNA gyrase B BKM79_RS00015 PF01751 Toprim domain BKM79_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus BKM79_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM79_RS00030 PF13726 Na+-H+ antiporter family BKM79_RS00030 PF03553 Na+/H+ antiporter family BKM79_RS00035 PF01493 GXGXG motif BKM79_RS00035 PF04898 Glutamate synthase central domain BKM79_RS00035 PF00310 Glutamine amidotransferases class-II BKM79_RS00035 PF01645 Conserved region in glutamate synthase BKM79_RS00045 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM79_RS00045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BKM79_RS00050 PF01351 Ribonuclease HII BKM79_RS00060 PF02915 Rubrerythrin BKM79_RS00065 PF00920 Dehydratase family BKM79_RS00070 PF07274 Protein of unknown function (DUF1440) BKM79_RS00080 PF06508 Queuosine biosynthesis protein QueC BKM79_RS00095 PF00672 HAMP domain BKM79_RS00095 PF12729 Four helix bundle sensory module for signal transduction BKM79_RS00095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKM79_RS00100 PF00034 Cytochrome c BKM79_RS00100 PF03150 Di-haem cytochrome c peroxidase BKM79_RS00105 PF01557 Fumarylacetoacetate (FAA) hydrolase family BKM79_RS00115 PF00206 Lyase BKM79_RS00115 PF10397 Adenylosuccinate lyase C-terminus BKM79_RS00120 PF03477 ATP cone domain BKM79_RS00120 PF02867 Ribonucleotide reductase, barrel domain BKM79_RS00120 PF00317 Ribonucleotide reductase, all-alpha domain BKM79_RS00130 PF02511 Thymidylate synthase complementing protein BKM79_RS00140 PF01368 DHH family BKM79_RS00140 PF02272 DHHA1 domain BKM79_RS00140 PF17768 RecJ OB domain BKM79_RS00195 PF07690 Major Facilitator Superfamily BKM79_RS00215 PF03144 Elongation factor Tu domain 2 BKM79_RS00215 PF00679 Elongation factor G C-terminus BKM79_RS00215 PF00009 Elongation factor Tu GTP binding domain BKM79_RS00230 PF03963 Flagellar hook capping protein - N-terminal region BKM79_RS00235 PF00460 Flagella basal body rod protein BKM79_RS00235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKM79_RS00235 PF07559 Flagellar basal body protein FlaE BKM79_RS00260 PF00939 Sodium:sulfate symporter transmembrane region BKM79_RS00265 PF00939 Sodium:sulfate symporter transmembrane region BKM79_RS00280 PF00939 Sodium:sulfate symporter transmembrane region BKM79_RS00285 PF00939 Sodium:sulfate symporter transmembrane region BKM79_RS00320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BKM79_RS00320 PF04509 CheC-like family BKM79_RS00325 PF02154 Flagellar motor switch protein FliM BKM79_RS00325 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BKM79_RS00330 PF04539 Sigma-70 region 3 BKM79_RS00330 PF04545 Sigma-70, region 4 BKM79_RS00330 PF04542 Sigma-70 region 2 BKM79_RS00340 PF10609 NUBPL iron-transfer P-loop NTPase BKM79_RS00345 PF00448 SRP54-type protein, GTPase domain BKM79_RS00350 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BKM79_RS00355 PF01220 Dehydroquinase class II BKM79_RS00360 PF01979 Amidohydrolase family BKM79_RS00365 PF01343 Peptidase family S49 BKM79_RS00385 PF02589 LUD domain BKM79_RS00385 PF11870 Domain of unknown function (DUF3390) BKM79_RS00385 PF13183 4Fe-4S dicluster domain BKM79_RS00390 PF02754 Cysteine-rich domain BKM79_RS00395 PF02652 L-lactate permease BKM79_RS00405 PF03372 Endonuclease/Exonuclease/phosphatase family BKM79_RS00410 PF03498 Cytolethal distending toxin A/C domain BKM79_RS00420 PF01654 Cytochrome bd terminal oxidase subunit I BKM79_RS00425 PF02322 Cytochrome bd terminal oxidase subunit II BKM79_RS00430 PF01177 Asp/Glu/Hydantoin racemase BKM79_RS00435 PF03167 Uracil DNA glycosylase superfamily BKM79_RS00440 PF00206 Lyase BKM79_RS00440 PF10415 Fumarase C C-terminus BKM79_RS00445 PF03605 Anaerobic c4-dicarboxylate membrane transporter BKM79_RS00475 PF00829 Ribosomal prokaryotic L21 protein BKM79_RS00480 PF01016 Ribosomal L27 protein BKM79_RS00485 PF01926 50S ribosome-binding GTPase BKM79_RS00485 PF01018 GTP1/OBG BKM79_RS00490 PF00696 Amino acid kinase family BKM79_RS00495 PF02911 Formyl transferase, C-terminal domain BKM79_RS00495 PF00551 Formyl transferase BKM79_RS00500 PF08279 HTH domain BKM79_RS00500 PF02237 Biotin protein ligase C terminal domain BKM79_RS00500 PF03099 Biotin/lipoate A/B protein ligase family BKM79_RS00505 PF13614 AAA domain BKM79_RS00510 PF02195 ParB-like nuclease domain BKM79_RS00510 PF17762 HTH domain found in ParB protein BKM79_RS00520 PF00430 ATP synthase B/B' CF(0) BKM79_RS00525 PF00213 ATP synthase delta (OSCP) subunit BKM79_RS00530 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKM79_RS00530 PF00306 ATP synthase alpha/beta chain, C terminal domain BKM79_RS00530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKM79_RS00535 PF00231 ATP synthase BKM79_RS00540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKM79_RS00540 PF02874 ATP synthase alpha/beta family, beta-barrel domain BKM79_RS00545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BKM79_RS00550 PF01618 MotA/TolQ/ExbB proton channel family BKM79_RS00555 PF02472 Biopolymer transport protein ExbD/TolR BKM79_RS00570 PF00691 OmpA family BKM79_RS00570 PF00223 Photosystem I psaA/psaB protein BKM79_RS00580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BKM79_RS00585 PF00698 Acyl transferase domain BKM79_RS00590 PF01048 Phosphorylase superfamily BKM79_RS00595 PF01171 PP-loop family BKM79_RS00610 PF02130 Uncharacterized protein family UPF0054 BKM79_RS00630 PF01258 Prokaryotic dksA/traR C4-type zinc finger BKM79_RS00635 PF02590 Predicted SPOUT methyltransferase BKM79_RS00640 PF17848 Acetyl-coA carboxylase zinc finger domain BKM79_RS00640 PF01039 Carboxyl transferase domain BKM79_RS00645 PF00459 Inositol monophosphatase family BKM79_RS00665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BKM79_RS00675 PF00288 GHMP kinases N terminal domain BKM79_RS00685 PF04760 Translation initiation factor IF-2, N-terminal region BKM79_RS00685 PF11987 Translation-initiation factor 2 BKM79_RS00685 PF00009 Elongation factor Tu GTP binding domain BKM79_RS00690 PF02033 Ribosome-binding factor A BKM79_RS00695 PF02576 RimP N-terminal domain BKM79_RS00695 PF17384 RimP C-terminal SH3 domain BKM79_RS00700 PF12102 Domain of unknown function (DUF3578) BKM79_RS00700 PF07728 AAA domain (dynein-related subfamily) BKM79_RS00715 PF00005 ABC transporter BKM79_RS00725 PF00672 HAMP domain BKM79_RS00725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKM79_RS00725 PF17200 Single Cache domain 2 BKM79_RS00735 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM79_RS00740 PF00085 Thioredoxin BKM79_RS00745 PF02021 Uncharacterised protein family UPF0102 BKM79_RS00755 PF00155 Aminotransferase class I and II BKM79_RS00775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BKM79_RS00785 PF04452 RNA methyltransferase BKM79_RS00835 PF02659 Putative manganese efflux pump BKM79_RS00850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BKM79_RS00850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BKM79_RS00865 PF16653 Saccharopine dehydrogenase C-terminal domain BKM79_RS00865 PF03435 Saccharopine dehydrogenase NADP binding domain BKM79_RS00870 PF00005 ABC transporter BKM79_RS00870 PF08402 TOBE domain BKM79_RS00880 PF13416 Bacterial extracellular solute-binding protein BKM79_RS00895 PF07715 TonB-dependent Receptor Plug Domain BKM79_RS00895 PF00593 TonB dependent receptor BKM79_RS00900 PF01618 MotA/TolQ/ExbB proton channel family BKM79_RS00905 PF02472 Biopolymer transport protein ExbD/TolR BKM79_RS00920 PF00571 CBS domain BKM79_RS00920 PF03471 Transporter associated domain BKM79_RS00920 PF01595 Cyclin M transmembrane N-terminal domain BKM79_RS00930 PF03831 PhnA domain BKM79_RS00930 PF08274 PhnA Zinc-Ribbon BKM79_RS00935 PF03741 Integral membrane protein TerC family BKM79_RS00940 PF00551 Formyl transferase BKM79_RS00945 PF03853 YjeF-related protein N-terminus BKM79_RS00945 PF01256 Carbohydrate kinase BKM79_RS00955 PF01078 Magnesium chelatase, subunit ChlI BKM79_RS00955 PF13335 Magnesium chelatase, subunit ChlI C-terminal BKM79_RS00960 PF01327 Polypeptide deformylase BKM79_RS00965 PF00574 Clp protease BKM79_RS00970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BKM79_RS00970 PF05698 Bacterial trigger factor protein (TF) C-terminus BKM79_RS00970 PF05697 Bacterial trigger factor protein (TF) BKM79_RS00975 PF01227 GTP cyclohydrolase I BKM79_RS00980 PF18269 T3SS EscN ATPase C-terminal domain BKM79_RS00980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKM79_RS00985 PF00156 Phosphoribosyl transferase domain BKM79_RS00990 PF01113 Dihydrodipicolinate reductase, N-terminus BKM79_RS00990 PF05173 Dihydrodipicolinate reductase, C-terminus BKM79_RS00995 PF05496 Holliday junction DNA helicase RuvB P-loop domain BKM79_RS00995 PF12002 MgsA AAA+ ATPase C terminal BKM79_RS00995 PF16193 AAA C-terminal domain BKM79_RS00995 PF01661 Macro domain BKM79_RS01015 PF09278 MerR, DNA binding BKM79_RS01015 PF00376 MerR family regulatory protein BKM79_RS01020 PF07282 Putative transposase DNA-binding domain BKM79_RS01020 PF01385 Probable transposase BKM79_RS01020 PF12323 Helix-turn-helix domain BKM79_RS01035 PF00009 Elongation factor Tu GTP binding domain BKM79_RS01035 PF03764 Elongation factor G, domain IV BKM79_RS01035 PF14492 Elongation Factor G, domain II BKM79_RS01035 PF00679 Elongation factor G C-terminus BKM79_RS01050 PF03600 Citrate transporter BKM79_RS01055 PF03169 OPT oligopeptide transporter protein BKM79_RS01060 PF02673 Bacitracin resistance protein BacA BKM79_RS01065 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKM79_RS01065 PF03129 Anticodon binding domain BKM79_RS01065 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BKM79_RS01070 PF00707 Translation initiation factor IF-3, C-terminal domain BKM79_RS01070 PF05198 Translation initiation factor IF-3, N-terminal domain BKM79_RS01085 PF03797 Autotransporter beta-domain BKM79_RS01085 PF02395 Immunoglobulin A1 protease BKM79_RS01115 PF02774 Semialdehyde dehydrogenase, dimerisation domain BKM79_RS01115 PF01118 Semialdehyde dehydrogenase, NAD binding domain BKM79_RS01125 PF00696 Amino acid kinase family BKM79_RS01130 PF00202 Aminotransferase class-III BKM79_RS01140 PF00132 Bacterial transferase hexapeptide (six repeats) BKM79_RS01145 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BKM79_RS01145 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BKM79_RS01150 PF00268 Ribonucleotide reductase, small chain BKM79_RS01160 PF00156 Phosphoribosyl transferase domain BKM79_RS01165 PF01765 Ribosome recycling factor BKM79_RS01170 PF03840 Preprotein translocase SecG subunit BKM79_RS01175 PF01027 Inhibitor of apoptosis-promoting Bax1 BKM79_RS01180 PF00484 Carbonic anhydrase BKM79_RS01185 PF00924 Mechanosensitive ion channel BKM79_RS01195 PF00266 Aminotransferase class-V BKM79_RS01200 PF01814 Hemerythrin HHE cation binding domain BKM79_RS01210 PF01632 Ribosomal protein L35 BKM79_RS01215 PF00453 Ribosomal protein L20 BKM79_RS01220 PF17202 Single cache domain 3 BKM79_RS01220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKM79_RS01220 PF00672 HAMP domain BKM79_RS01245 PF00083 Sugar (and other) transporter BKM79_RS01255 PF01967 MoaC family BKM79_RS01260 PF04359 Protein of unknown function (DUF493) BKM79_RS01270 PF03372 Endonuclease/Exonuclease/phosphatase family BKM79_RS01275 PF00884 Sulfatase BKM79_RS01275 PF08019 Phosphoethanolamine transferase EptA/EptB BKM79_RS01280 PF01219 Prokaryotic diacylglycerol kinase BKM79_RS01290 PF04909 Amidohydrolase BKM79_RS01300 PF01209 ubiE/COQ5 methyltransferase family BKM79_RS01305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKM79_RS01305 PF00672 HAMP domain BKM79_RS01305 PF17200 Single Cache domain 2 BKM79_RS01310 PF02535 ZIP Zinc transporter BKM79_RS01315 PF01568 Molydopterin dinucleotide binding domain BKM79_RS01315 PF18364 Molybdopterin oxidoreductase N-terminal domain BKM79_RS01315 PF00384 Molybdopterin oxidoreductase BKM79_RS01335 PF01145 SPFH domain / Band 7 family BKM79_RS01340 PF01063 Amino-transferase class IV BKM79_RS01345 PF01361 Tautomerase enzyme BKM79_RS01350 PF00578 AhpC/TSA family BKM79_RS01355 PF02677 Epoxyqueuosine reductase QueH BKM79_RS01360 PF07977 FabA-like domain BKM79_RS01365 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BKM79_RS01365 PF00132 Bacterial transferase hexapeptide (six repeats) BKM79_RS01370 PF06689 ClpX C4-type zinc finger BKM79_RS01370 PF07724 AAA domain (Cdc48 subfamily) BKM79_RS01370 PF10431 C-terminal, D2-small domain, of ClpB protein BKM79_RS01385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKM79_RS01385 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BKM79_RS01385 PF02142 MGS-like domain BKM79_RS01405 PF01584 CheW-like domain BKM79_RS01410 PF01627 Hpt domain BKM79_RS01410 PF01584 CheW-like domain BKM79_RS01410 PF02895 Signal transducing histidine kinase, homodimeric domain BKM79_RS01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM79_RS01410 PF00072 Response regulator receiver domain BKM79_RS01415 PF01584 CheW-like domain BKM79_RS01415 PF00072 Response regulator receiver domain BKM79_RS01425 PF03449 Transcription elongation factor, N-terminal BKM79_RS01425 PF01272 Transcription elongation factor, GreA/GreB, C-term BKM79_RS01430 PF02684 Lipid-A-disaccharide synthetase BKM79_RS01455 PF13673 Acetyltransferase (GNAT) domain BKM79_RS01460 PF02261 Aspartate decarboxylase BKM79_RS01465 PF02569 Pantoate-beta-alanine ligase BKM79_RS01470 PF02548 Ketopantoate hydroxymethyltransferase BKM79_RS01475 PF00905 Penicillin binding protein transpeptidase domain BKM79_RS01510 PF00155 Aminotransferase class I and II BKM79_RS01515 PF00202 Aminotransferase class-III BKM79_RS01525 PF00893 Small Multidrug Resistance protein BKM79_RS01535 PF14693 Ribosomal protein TL5, C-terminal domain BKM79_RS01535 PF01386 Ribosomal L25p family BKM79_RS01540 PF01195 Peptidyl-tRNA hydrolase BKM79_RS01550 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BKM79_RS01550 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BKM79_RS01560 PF00800 Prephenate dehydratase BKM79_RS01560 PF01817 Chorismate mutase type II BKM79_RS01560 PF01842 ACT domain BKM79_RS01565 PF00155 Aminotransferase class I and II BKM79_RS01570 PF08345 Flagellar M-ring protein C-terminal BKM79_RS01570 PF01514 Secretory protein of YscJ/FliF family BKM79_RS01575 PF14841 FliG middle domain BKM79_RS01575 PF14842 FliG N-terminal domain BKM79_RS01575 PF01706 FliG C-terminal domain BKM79_RS01600 PF01209 ubiE/COQ5 methyltransferase family BKM79_RS01605 PF13742 OB-fold nucleic acid binding domain BKM79_RS01605 PF02601 Exonuclease VII, large subunit BKM79_RS01610 PF00266 Aminotransferase class-V BKM79_RS01615 PF01042 Endoribonuclease L-PSP BKM79_RS01620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BKM79_RS01620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BKM79_RS01630 PF01783 Ribosomal L32p protein family BKM79_RS01640 PF00334 Nucleoside diphosphate kinase BKM79_RS01645 PF00037 4Fe-4S binding domain BKM79_RS01650 PF10417 C-terminal domain of 1-Cys peroxiredoxin BKM79_RS01650 PF00578 AhpC/TSA family BKM79_RS01660 PF13677 Membrane MotB of proton-channel complex MotA/MotB BKM79_RS01660 PF00691 OmpA family BKM79_RS01665 PF01618 MotA/TolQ/ExbB proton channel family BKM79_RS01670 PF01612 3'-5' exonuclease BKM79_RS01670 PF00476 DNA polymerase family A BKM79_RS01670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BKM79_RS01670 PF01367 5'-3' exonuclease, C-terminal SAM fold BKM79_RS01675 PF00083 Sugar (and other) transporter BKM79_RS01675 PF07690 Major Facilitator Superfamily BKM79_RS01680 PF01156 Inosine-uridine preferring nucleoside hydrolase BKM79_RS01685 PF09335 SNARE associated Golgi protein BKM79_RS01690 PF17760 UvrA interaction domain BKM79_RS01690 PF17755 UvrA DNA-binding domain BKM79_RS01690 PF00005 ABC transporter BKM79_RS01705 PF04715 Anthranilate synthase component I, N terminal region BKM79_RS01705 PF00425 chorismate binding enzyme BKM79_RS01710 PF02885 Glycosyl transferase family, helical bundle domain BKM79_RS01710 PF00117 Glutamine amidotransferase class-I BKM79_RS01710 PF00591 Glycosyl transferase family, a/b domain BKM79_RS01715 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BKM79_RS01720 PF00291 Pyridoxal-phosphate dependent enzyme BKM79_RS01725 PF00290 Tryptophan synthase alpha chain BKM79_RS01735 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BKM79_RS01735 PF04509 CheC-like family BKM79_RS01750 PF00037 4Fe-4S binding domain BKM79_RS01755 PF00072 Response regulator receiver domain BKM79_RS01755 PF00486 Transcriptional regulatory protein, C terminal BKM79_RS01765 PF02660 Glycerol-3-phosphate acyltransferase BKM79_RS01770 PF00034 Cytochrome c BKM79_RS01770 PF03150 Di-haem cytochrome c peroxidase BKM79_RS01780 PF01252 Signal peptidase (SPase) II BKM79_RS01785 PF06969 HemN C-terminal domain BKM79_RS01785 PF04055 Radical SAM superfamily BKM79_RS01795 PF02321 Outer membrane efflux protein BKM79_RS01800 PF00873 AcrB/AcrD/AcrF family BKM79_RS01805 PF13533 Biotin-lipoyl like BKM79_RS01820 PF01165 Ribosomal protein S21 BKM79_RS01835 PF03738 Glutathionylspermidine synthase preATP-grasp BKM79_RS01840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKM79_RS01840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKM79_RS01845 PF04461 Protein of unknown function (DUF520) BKM79_RS01860 PF17862 AAA+ lid domain BKM79_RS01860 PF06480 FtsH Extracellular BKM79_RS01860 PF01434 Peptidase family M41 BKM79_RS01860 PF00004 ATPase family associated with various cellular activities (AAA) BKM79_RS01865 PF01794 Ferric reductase like transmembrane component BKM79_RS01870 PF00174 Oxidoreductase molybdopterin binding domain BKM79_RS01880 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BKM79_RS01885 PF01029 NusB family BKM79_RS01890 PF00885 6,7-dimethyl-8-ribityllumazine synthase BKM79_RS01895 PF00793 DAHP synthetase I family BKM79_RS01910 PF01202 Shikimate kinase BKM79_RS01915 PF00579 tRNA synthetases class I (W and Y) BKM79_RS01935 PF00391 PEP-utilising enzyme, mobile domain BKM79_RS01935 PF00224 Pyruvate kinase, barrel domain BKM79_RS01935 PF02887 Pyruvate kinase, alpha/beta domain BKM79_RS01945 PF03309 Type III pantothenate kinase BKM79_RS01955 PF15437 Plasminogen-binding protein pgbA C-terminal BKM79_RS01975 PF01475 Ferric uptake regulator family BKM79_RS01980 PF01336 OB-fold nucleic acid binding domain BKM79_RS01980 PF00152 tRNA synthetases class II (D, K and N) BKM79_RS01985 PF00464 Serine hydroxymethyltransferase BKM79_RS02000 PF08501 Shikimate dehydrogenase substrate binding domain BKM79_RS02010 PF01790 Prolipoprotein diacylglyceryl transferase BKM79_RS02015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BKM79_RS02020 PF00890 FAD binding domain BKM79_RS02020 PF02910 Fumarate reductase flavoprotein C-term BKM79_RS02025 PF13183 4Fe-4S dicluster domain BKM79_RS02025 PF13085 2Fe-2S iron-sulfur cluster binding domain BKM79_RS02030 PF01926 50S ribosome-binding GTPase BKM79_RS02030 PF12631 MnmE helical domain BKM79_RS02030 PF10396 GTP-binding protein TrmE N-terminus BKM79_RS02050 PF00732 GMC oxidoreductase BKM79_RS02050 PF05199 GMC oxidoreductase BKM79_RS02105 PF12848 ABC transporter BKM79_RS02105 PF00005 ABC transporter BKM79_RS02120 PF01205 Uncharacterized protein family UPF0029 BKM79_RS02120 PF09186 Domain of unknown function (DUF1949) BKM79_RS02160 PF08245 Mur ligase middle domain BKM79_RS02165 PF00953 Glycosyl transferase family 4 BKM79_RS02170 PF01676 Metalloenzyme superfamily BKM79_RS02170 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BKM79_RS02190 PF00890 FAD binding domain BKM79_RS02190 PF02910 Fumarate reductase flavoprotein C-term BKM79_RS02195 PF13085 2Fe-2S iron-sulfur cluster binding domain BKM79_RS02195 PF13183 4Fe-4S dicluster domain BKM79_RS02200 PF02754 Cysteine-rich domain BKM79_RS02205 PF03070 TENA/THI-4/PQQC family BKM79_RS02210 PF00550 Phosphopantetheine attachment site BKM79_RS02215 PF00109 Beta-ketoacyl synthase, N-terminal domain BKM79_RS02215 PF02801 Beta-ketoacyl synthase, C-terminal domain BKM79_RS02220 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BKM79_RS02225 PF00593 TonB dependent receptor BKM79_RS02225 PF07715 TonB-dependent Receptor Plug Domain BKM79_RS02235 PF00593 TonB dependent receptor BKM79_RS02235 PF07715 TonB-dependent Receptor Plug Domain BKM79_RS02240 PF00293 NUDIX domain BKM79_RS02245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKM79_RS02245 PF13426 PAS domain BKM79_RS02245 PF08447 PAS fold BKM79_RS02255 PF00830 Ribosomal L28 family BKM79_RS02260 PF00834 Ribulose-phosphate 3 epimerase family BKM79_RS02265 PF02811 PHP domain BKM79_RS02265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKM79_RS02265 PF14579 Helix-hairpin-helix motif BKM79_RS02265 PF00929 Exonuclease BKM79_RS02265 PF11490 DNA polymerase III polC-type N-terminus II BKM79_RS02265 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKM79_RS02265 PF14480 DNA polymerase III polC-type N-terminus I BKM79_RS02270 PF01964 Radical SAM ThiC family BKM79_RS02290 PF04028 Domain of unknown function (DUF374) BKM79_RS02295 PF01938 TRAM domain BKM79_RS02295 PF00919 Uncharacterized protein family UPF0004 BKM79_RS02295 PF04055 Radical SAM superfamily BKM79_RS02305 PF13184 NusA-like KH domain BKM79_RS02305 PF08529 NusA N-terminal domain BKM79_RS02315 PF04055 Radical SAM superfamily BKM79_RS02320 PF05193 Peptidase M16 inactive domain BKM79_RS02325 PF00271 Helicase conserved C-terminal domain BKM79_RS02325 PF04851 Type III restriction enzyme, res subunit BKM79_RS02330 PF01152 Bacterial-like globin BKM79_RS02340 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS02345 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS02350 PF00005 ABC transporter BKM79_RS02395 PF02357 Transcription termination factor nusG BKM79_RS02400 PF00298 Ribosomal protein L11, RNA binding domain BKM79_RS02400 PF03946 Ribosomal protein L11, N-terminal domain BKM79_RS02405 PF00687 Ribosomal protein L1p/L10e family BKM79_RS02410 PF00466 Ribosomal protein L10 BKM79_RS02415 PF16320 Ribosomal protein L7/L12 dimerisation domain BKM79_RS02415 PF00542 Ribosomal protein L7/L12 C-terminal domain BKM79_RS02420 PF04560 RNA polymerase Rpb2, domain 7 BKM79_RS02420 PF00562 RNA polymerase Rpb2, domain 6 BKM79_RS02420 PF04563 RNA polymerase beta subunit BKM79_RS02420 PF04561 RNA polymerase Rpb2, domain 2 BKM79_RS02420 PF10385 RNA polymerase beta subunit external 1 domain BKM79_RS02420 PF04565 RNA polymerase Rpb2, domain 3 BKM79_RS02435 PF00701 Dihydrodipicolinate synthetase family BKM79_RS02445 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BKM79_RS02445 PF08666 SAF domain BKM79_RS02460 PF07690 Major Facilitator Superfamily BKM79_RS02480 PF00164 Ribosomal protein S12/S23 BKM79_RS02485 PF00177 Ribosomal protein S7p/S5e BKM79_RS02490 PF03764 Elongation factor G, domain IV BKM79_RS02490 PF14492 Elongation Factor G, domain II BKM79_RS02490 PF00009 Elongation factor Tu GTP binding domain BKM79_RS02490 PF03144 Elongation factor Tu domain 2 BKM79_RS02490 PF00679 Elongation factor G C-terminus BKM79_RS02520 PF00218 Indole-3-glycerol phosphate synthase BKM79_RS02545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BKM79_RS02545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BKM79_RS02550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BKM79_RS02560 PF02545 Maf-like protein BKM79_RS02565 PF00912 Transglycosylase BKM79_RS02565 PF00905 Penicillin binding protein transpeptidase domain BKM79_RS02565 PF17092 Penicillin-binding protein OB-like domain BKM79_RS02575 PF02583 Metal-sensitive transcriptional repressor BKM79_RS02580 PF13180 PDZ domain BKM79_RS02580 PF03572 Peptidase family S41 BKM79_RS02585 PF01259 SAICAR synthetase BKM79_RS02605 PF01553 Acyltransferase BKM79_RS02610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BKM79_RS02615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM79_RS02615 PF00183 Hsp90 protein BKM79_RS02620 PF00581 Rhodanese-like domain BKM79_RS02640 PF02049 Flagellar hook-basal body complex protein FliE BKM79_RS02645 PF00460 Flagella basal body rod protein BKM79_RS02645 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKM79_RS02650 PF00460 Flagella basal body rod protein BKM79_RS02665 PF03971 Monomeric isocitrate dehydrogenase BKM79_RS02670 PF00056 lactate/malate dehydrogenase, NAD binding domain BKM79_RS02670 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BKM79_RS02675 PF08442 ATP-grasp domain BKM79_RS02675 PF00549 CoA-ligase BKM79_RS02680 PF00549 CoA-ligase BKM79_RS02680 PF02629 CoA binding domain BKM79_RS02690 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BKM79_RS02690 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BKM79_RS02690 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BKM79_RS02695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKM79_RS02715 PF00348 Polyprenyl synthetase BKM79_RS02725 PF03129 Anticodon binding domain BKM79_RS02725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BKM79_RS02725 PF04073 Aminoacyl-tRNA editing domain BKM79_RS02735 PF03900 Porphobilinogen deaminase, C-terminal domain BKM79_RS02735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BKM79_RS02750 PF07195 Flagellar hook-associated protein 2 C-terminus BKM79_RS02750 PF02465 Flagellar hook-associated protein 2 N-terminus BKM79_RS02750 PF07196 Flagellin hook IN motif BKM79_RS02755 PF02561 Flagellar protein FliS BKM79_RS02770 PF08207 Elongation factor P (EF-P) KOW-like domain BKM79_RS02770 PF09285 Elongation factor P, C-terminal BKM79_RS02770 PF01132 Elongation factor P (EF-P) OB domain BKM79_RS02805 PF00171 Aldehyde dehydrogenase family BKM79_RS02810 PF07992 Pyridine nucleotide-disulphide oxidoreductase BKM79_RS02825 PF00772 DnaB-like helicase N terminal domain BKM79_RS02825 PF03796 DnaB-like helicase C terminal domain BKM79_RS02840 PF13099 Domain of unknown function (DUF3944) BKM79_RS02840 PF03981 Ubiquinol-cytochrome C chaperone BKM79_RS02845 PF13099 Domain of unknown function (DUF3944) BKM79_RS02845 PF03981 Ubiquinol-cytochrome C chaperone BKM79_RS02895 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BKM79_RS02895 PF00925 GTP cyclohydrolase II BKM79_RS02900 PF09424 Yqey-like protein BKM79_RS02905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BKM79_RS02905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BKM79_RS02905 PF00205 Thiamine pyrophosphate enzyme, central domain BKM79_RS02910 PF10369 Small subunit of acetolactate synthase BKM79_RS02915 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BKM79_RS02915 PF00132 Bacterial transferase hexapeptide (six repeats) BKM79_RS02920 PF02547 Queuosine biosynthesis protein BKM79_RS02925 PF00902 Sec-independent protein translocase protein (TatC) BKM79_RS02930 PF02416 mttA/Hcf106 family BKM79_RS02935 PF06969 HemN C-terminal domain BKM79_RS02935 PF04055 Radical SAM superfamily BKM79_RS02940 PF00293 NUDIX domain BKM79_RS02945 PF01842 ACT domain BKM79_RS02945 PF13840 ACT domain BKM79_RS02945 PF00696 Amino acid kinase family BKM79_RS02960 PF00809 Pterin binding enzyme BKM79_RS02965 PF00533 BRCA1 C Terminus (BRCT) domain BKM79_RS02965 PF01653 NAD-dependent DNA ligase adenylation domain BKM79_RS02965 PF03120 NAD-dependent DNA ligase OB-fold domain BKM79_RS02980 PF01687 Riboflavin kinase BKM79_RS02980 PF06574 FAD synthetase BKM79_RS02985 PF13847 Methyltransferase domain BKM79_RS03000 PF03458 UPF0126 domain BKM79_RS03010 PF00633 Helix-hairpin-helix motif BKM79_RS03010 PF10576 Iron-sulfur binding domain of endonuclease III BKM79_RS03010 PF00730 HhH-GPD superfamily base excision DNA repair protein BKM79_RS03045 PF03475 3-alpha domain BKM79_RS03045 PF03473 MOSC domain BKM79_RS03065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BKM79_RS03075 PF02321 Outer membrane efflux protein BKM79_RS03095 PF03062 MBOAT, membrane-bound O-acyltransferase family BKM79_RS03100 PF00210 Ferritin-like domain BKM79_RS03105 PF12849 PBP superfamily domain BKM79_RS03110 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS03115 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS03120 PF00005 ABC transporter BKM79_RS03130 PF01554 MatE BKM79_RS03150 PF02492 CobW/HypB/UreG, nucleotide-binding domain BKM79_RS03155 PF01455 HupF/HypC family BKM79_RS03165 PF02769 AIR synthase related protein, C-terminal domain BKM79_RS03165 PF00586 AIR synthase related protein, N-terminal domain BKM79_RS03170 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BKM79_RS03185 PF00773 RNB domain BKM79_RS03190 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BKM79_RS03190 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BKM79_RS03220 PF00719 Inorganic pyrophosphatase BKM79_RS03230 PF00152 tRNA synthetases class II (D, K and N) BKM79_RS03230 PF02938 GAD domain BKM79_RS03230 PF01336 OB-fold nucleic acid binding domain BKM79_RS03235 PF01513 ATP-NAD kinase BKM79_RS03240 PF13476 AAA domain BKM79_RS03245 PF00990 Diguanylate cyclase, GGDEF domain BKM79_RS03245 PF00072 Response regulator receiver domain BKM79_RS03250 PF01026 TatD related DNase BKM79_RS03255 PF01476 LysM domain BKM79_RS03255 PF00877 NlpC/P60 family BKM79_RS03260 PF05036 Sporulation related domain BKM79_RS03260 PF03330 Lytic transglycolase BKM79_RS03280 PF01926 50S ribosome-binding GTPase BKM79_RS03290 PF03717 Penicillin-binding Protein dimerisation domain BKM79_RS03290 PF00905 Penicillin binding protein transpeptidase domain BKM79_RS03295 PF01321 Creatinase/Prolidase N-terminal domain BKM79_RS03295 PF00557 Metallopeptidase family M24 BKM79_RS03300 PF00854 POT family BKM79_RS03305 PF00854 POT family BKM79_RS03310 PF00854 POT family BKM79_RS03325 PF01926 50S ribosome-binding GTPase BKM79_RS03325 PF07650 KH domain BKM79_RS03330 PF10431 C-terminal, D2-small domain, of ClpB protein BKM79_RS03330 PF07724 AAA domain (Cdc48 subfamily) BKM79_RS03345 PF00764 Arginosuccinate synthase BKM79_RS03350 PF01479 S4 domain BKM79_RS03355 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BKM79_RS03360 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKM79_RS03360 PF00005 ABC transporter BKM79_RS03365 PF00309 Sigma-54 factor, Activator interacting domain (AID) BKM79_RS03365 PF04963 Sigma-54 factor, core binding domain BKM79_RS03365 PF04552 Sigma-54, DNA binding domain BKM79_RS03370 PF03605 Anaerobic c4-dicarboxylate membrane transporter BKM79_RS03390 PF02669 K+-transporting ATPase, c chain BKM79_RS03430 PF04551 GcpE protein BKM79_RS03435 PF02107 Flagellar L-ring protein BKM79_RS03440 PF01515 Phosphate acetyl/butaryl transferase BKM79_RS03445 PF00871 Acetokinase family BKM79_RS03465 PF01795 MraW methylase family BKM79_RS03475 PF02491 SHS2 domain inserted in FTSA BKM79_RS03480 PF00091 Tubulin/FtsZ family, GTPase domain BKM79_RS03480 PF12327 FtsZ family, C-terminal domain BKM79_RS03485 PF00460 Flagella basal body rod protein BKM79_RS03485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKM79_RS03490 PF00460 Flagella basal body rod protein BKM79_RS03490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKM79_RS03505 PF01136 Peptidase family U32 BKM79_RS03510 PF00731 AIR carboxylase BKM79_RS03520 PF02091 Glycyl-tRNA synthetase alpha subunit BKM79_RS03540 PF00849 RNA pseudouridylate synthase BKM79_RS03545 PF02978 Signal peptide binding domain BKM79_RS03545 PF02881 SRP54-type protein, helical bundle domain BKM79_RS03545 PF00448 SRP54-type protein, GTPase domain BKM79_RS03550 PF00886 Ribosomal protein S16 BKM79_RS03565 PF01746 tRNA (Guanine-1)-methyltransferase BKM79_RS03570 PF01245 Ribosomal protein L19 BKM79_RS03575 PF00576 HIUase/Transthyretin family BKM79_RS03580 PF01474 Class-II DAHP synthetase family BKM79_RS03585 PF03960 ArsC family BKM79_RS03595 PF14579 Helix-hairpin-helix motif BKM79_RS03595 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BKM79_RS03595 PF07733 Bacterial DNA polymerase III alpha NTPase domain BKM79_RS03595 PF02811 PHP domain BKM79_RS03605 PF00669 Bacterial flagellin N-terminal helical region BKM79_RS03615 PF17827 PrmC N-terminal domain BKM79_RS03615 PF05175 Methyltransferase small domain BKM79_RS03630 PF00994 Probable molybdopterin binding domain BKM79_RS03635 PF01544 CorA-like Mg2+ transporter protein BKM79_RS03655 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS03675 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKM79_RS03755 PF07715 TonB-dependent Receptor Plug Domain BKM79_RS03755 PF00593 TonB dependent receptor BKM79_RS03765 PF01025 GrpE BKM79_RS03780 PF12706 Beta-lactamase superfamily domain BKM79_RS03790 PF00155 Aminotransferase class I and II BKM79_RS03795 PF00132 Bacterial transferase hexapeptide (six repeats) BKM79_RS03795 PF06426 Serine acetyltransferase, N-terminal BKM79_RS03800 PF17810 Arginine decarboxylase helical bundle domain BKM79_RS03800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BKM79_RS03800 PF17944 Arginine decarboxylase C-terminal helical extension BKM79_RS03805 PF03129 Anticodon binding domain BKM79_RS03805 PF13393 Histidyl-tRNA synthetase BKM79_RS03810 PF02223 Thymidylate kinase BKM79_RS03815 PF01467 Cytidylyltransferase-like BKM79_RS03820 PF02441 Flavoprotein BKM79_RS03830 PF03180 NLPA lipoprotein BKM79_RS03835 PF03180 NLPA lipoprotein BKM79_RS03840 PF03180 NLPA lipoprotein BKM79_RS03845 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS03850 PF09383 NIL domain BKM79_RS03850 PF00005 ABC transporter BKM79_RS03865 PF00580 UvrD/REP helicase N-terminal domain BKM79_RS03865 PF13361 UvrD-like helicase C-terminal domain BKM79_RS03875 PF08534 Redoxin BKM79_RS03890 PF13187 4Fe-4S dicluster domain BKM79_RS03890 PF12801 4Fe-4S binding domain BKM79_RS03895 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BKM79_RS03925 PF01743 Poly A polymerase head domain BKM79_RS03925 PF13735 tRNA nucleotidyltransferase domain 2 putative BKM79_RS03925 PF12627 Probable RNA and SrmB- binding site of polymerase A BKM79_RS03930 PF01842 ACT domain BKM79_RS03930 PF00551 Formyl transferase BKM79_RS03935 PF00266 Aminotransferase class-V BKM79_RS03945 PF00512 His Kinase A (phospho-acceptor) domain BKM79_RS03945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM79_RS03955 PF08245 Mur ligase middle domain BKM79_RS03955 PF02875 Mur ligase family, glutamate ligase domain BKM79_RS03955 PF01225 Mur ligase family, catalytic domain BKM79_RS03970 PF07478 D-ala D-ala ligase C-terminus BKM79_RS03970 PF01820 D-ala D-ala ligase N-terminus BKM79_RS03990 PF01406 tRNA synthetases class I (C) catalytic domain BKM79_RS03990 PF09190 DALR domain BKM79_RS03995 PF00664 ABC transporter transmembrane region BKM79_RS03995 PF00005 ABC transporter BKM79_RS04000 PF01180 Dihydroorotate dehydrogenase BKM79_RS04010 PF00701 Dihydrodipicolinate synthetase family BKM79_RS04025 PF00753 Metallo-beta-lactamase superfamily BKM79_RS04030 PF02540 NAD synthase BKM79_RS04040 PF00291 Pyridoxal-phosphate dependent enzyme BKM79_RS04045 PF02348 Cytidylyltransferase BKM79_RS04060 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKM79_RS04075 PF00813 FliP family BKM79_RS04085 PF02441 Flavoprotein BKM79_RS04085 PF04127 DNA / pantothenate metabolism flavoprotein BKM79_RS04110 PF01416 tRNA pseudouridine synthase BKM79_RS04115 PF00291 Pyridoxal-phosphate dependent enzyme BKM79_RS04115 PF13291 ACT domain BKM79_RS04135 PF03553 Na+/H+ antiporter family BKM79_RS04140 PF00106 short chain dehydrogenase BKM79_RS04150 PF06434 Aconitate hydratase 2 N-terminus BKM79_RS04150 PF00330 Aconitase family (aconitate hydratase) BKM79_RS04150 PF11791 Aconitate B N-terminal domain BKM79_RS04155 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BKM79_RS04155 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BKM79_RS04165 PF00133 tRNA synthetases class I (I, L, M and V) BKM79_RS04165 PF09334 tRNA synthetases class I (M) BKM79_RS04165 PF01588 Putative tRNA binding domain BKM79_RS04175 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BKM79_RS04200 PF00749 tRNA synthetases class I (E and Q), catalytic domain BKM79_RS04205 PF00149 Calcineurin-like phosphoesterase BKM79_RS04210 PF02666 Phosphatidylserine decarboxylase BKM79_RS04215 PF01312 FlhB HrpN YscU SpaS Family BKM79_RS04225 PF07690 Major Facilitator Superfamily BKM79_RS04250 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BKM79_RS04250 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BKM79_RS04255 PF10502 Signal peptidase, peptidase S26 BKM79_RS04260 PF03454 MoeA C-terminal region (domain IV) BKM79_RS04260 PF03453 MoeA N-terminal region (domain I and II) BKM79_RS04260 PF00994 Probable molybdopterin binding domain BKM79_RS04265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BKM79_RS04275 PF00117 Glutamine amidotransferase class-I BKM79_RS04275 PF00591 Glycosyl transferase family, a/b domain BKM79_RS04275 PF02885 Glycosyl transferase family, helical bundle domain BKM79_RS04285 PF18644 Phage integrase SAM-like domain BKM79_RS04285 PF00589 Phage integrase family BKM79_RS04295 PF02600 Disulfide bond formation protein DsbB BKM79_RS04340 PF00771 FHIPEP family BKM79_RS04345 PF02082 Transcriptional regulator BKM79_RS04350 PF00312 Ribosomal protein S15 BKM79_RS04360 PF00669 Bacterial flagellin N-terminal helical region BKM79_RS04360 PF00700 Bacterial flagellin C-terminal helical region BKM79_RS04385 PF00072 Response regulator receiver domain BKM79_RS04385 PF00486 Transcriptional regulatory protein, C terminal BKM79_RS04390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BKM79_RS04390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BKM79_RS04390 PF01842 ACT domain BKM79_RS04400 PF00575 S1 RNA binding domain BKM79_RS04405 PF02401 LytB protein BKM79_RS04410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BKM79_RS04420 PF01409 tRNA synthetases class II core domain (F) BKM79_RS04420 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BKM79_RS04425 PF01230 HIT domain BKM79_RS04440 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS04445 PF00005 ABC transporter BKM79_RS04450 PF01235 Sodium:alanine symporter family BKM79_RS04455 PF00588 SpoU rRNA Methylase family BKM79_RS04460 PF01168 Alanine racemase, N-terminal domain BKM79_RS04460 PF00842 Alanine racemase, C-terminal domain BKM79_RS04485 PF02630 SCO1/SenC BKM79_RS04495 PF00216 Bacterial DNA-binding protein BKM79_RS04505 PF03061 Thioesterase superfamily BKM79_RS04515 PF13722 5TM C-terminal transporter carbon starvation CstA BKM79_RS04515 PF02554 Carbon starvation protein CstA BKM79_RS04520 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BKM79_RS04520 PF14572 Phosphoribosyl synthetase-associated domain BKM79_RS04525 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS04530 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS04540 PF00005 ABC transporter BKM79_RS04545 PF01739 CheR methyltransferase, SAM binding domain BKM79_RS04550 PF01339 CheB methylesterase BKM79_RS04550 PF00072 Response regulator receiver domain BKM79_RS04555 PF02502 Ribose/Galactose Isomerase BKM79_RS04565 PF00156 Phosphoribosyl transferase domain BKM79_RS04580 PF06071 Protein of unknown function (DUF933) BKM79_RS04580 PF01926 50S ribosome-binding GTPase BKM79_RS04585 PF14698 Argininosuccinate lyase C-terminal BKM79_RS04585 PF00206 Lyase BKM79_RS04590 PF01293 Phosphoenolpyruvate carboxykinase BKM79_RS04595 PF00364 Biotin-requiring enzyme BKM79_RS04595 PF00682 HMGL-like BKM79_RS04595 PF02436 Conserved carboxylase domain BKM79_RS04600 PF00209 Sodium:neurotransmitter symporter family BKM79_RS04605 PF00209 Sodium:neurotransmitter symporter family BKM79_RS04625 PF00501 AMP-binding enzyme BKM79_RS04625 PF01553 Acyltransferase BKM79_RS04670 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS04680 PF01043 SecA preprotein cross-linking domain BKM79_RS04680 PF07516 SecA Wing and Scaffold domain BKM79_RS04680 PF02810 SEC-C motif BKM79_RS04680 PF07517 SecA DEAD-like domain BKM79_RS04685 PF03548 Outer membrane lipoprotein carrier protein LolA BKM79_RS04695 PF02689 Helicase BKM79_RS04695 PF05970 PIF1-like helicase BKM79_RS04705 PF00795 Carbon-nitrogen hydrolase BKM79_RS04710 PF16916 Dimerisation domain of Zinc Transporter BKM79_RS04710 PF01545 Cation efflux family BKM79_RS04715 PF04371 Porphyromonas-type peptidyl-arginine deiminase BKM79_RS04725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKM79_RS04725 PF00672 HAMP domain BKM79_RS04725 PF02743 Cache domain BKM79_RS04735 PF02142 MGS-like domain BKM79_RS04735 PF01808 AICARFT/IMPCHase bienzyme BKM79_RS04740 PF00226 DnaJ domain BKM79_RS04740 PF05099 Tellurite resistance protein TerB BKM79_RS04745 PF02769 AIR synthase related protein, C-terminal domain BKM79_RS04745 PF00586 AIR synthase related protein, N-terminal domain BKM79_RS04745 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BKM79_RS04760 PF14849 YidC periplasmic domain BKM79_RS04760 PF02096 60Kd inner membrane protein BKM79_RS04765 PF01809 Putative membrane protein insertion efficiency factor BKM79_RS04770 PF00825 Ribonuclease P BKM79_RS04775 PF00468 Ribosomal protein L34 BKM79_RS04795 PF03061 Thioesterase superfamily BKM79_RS04830 PF08003 Protein of unknown function (DUF1698) BKM79_RS04845 PF00565 Staphylococcal nuclease homologue BKM79_RS04850 PF07687 Peptidase dimerisation domain BKM79_RS04850 PF01546 Peptidase family M20/M25/M40 BKM79_RS04860 PF00497 Bacterial extracellular solute-binding proteins, family 3 BKM79_RS04870 PF03883 Peroxide stress protein YaaA BKM79_RS04875 PF01546 Peptidase family M20/M25/M40 BKM79_RS04875 PF07687 Peptidase dimerisation domain BKM79_RS04895 PF17437 Family of unknown function (DUF5416) BKM79_RS04905 PF04055 Radical SAM superfamily BKM79_RS04905 PF06969 HemN C-terminal domain BKM79_RS04910 PF10788 Protein of unknown function (DUF2603) BKM79_RS04915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BKM79_RS04915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BKM79_RS04920 PF00490 Delta-aminolevulinic acid dehydratase BKM79_RS04925 PF00925 GTP cyclohydrolase II BKM79_RS04930 PF02527 rRNA small subunit methyltransferase G BKM79_RS04940 PF03601 Conserved hypothetical protein 698 BKM79_RS04945 PF03466 LysR substrate binding domain BKM79_RS04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BKM79_RS04950 PF00140 Sigma-70 factor, region 1.2 BKM79_RS04950 PF04545 Sigma-70, region 4 BKM79_RS04950 PF04539 Sigma-70 region 3 BKM79_RS04950 PF04542 Sigma-70 region 2 BKM79_RS04970 PF17862 AAA+ lid domain BKM79_RS04970 PF06480 FtsH Extracellular BKM79_RS04970 PF01434 Peptidase family M41 BKM79_RS04970 PF00004 ATPase family associated with various cellular activities (AAA) BKM79_RS04995 PF01702 Queuine tRNA-ribosyltransferase BKM79_RS05015 PF05140 ResB-like family BKM79_RS05015 PF01578 Cytochrome C assembly protein BKM79_RS05020 PF00005 ABC transporter BKM79_RS05025 PF12399 Branched-chain amino acid ATP-binding cassette transporter BKM79_RS05025 PF00005 ABC transporter BKM79_RS05030 PF11862 Domain of unknown function (DUF3382) BKM79_RS05030 PF02653 Branched-chain amino acid transport system / permease component BKM79_RS05035 PF02653 Branched-chain amino acid transport system / permease component BKM79_RS05070 PF00072 Response regulator receiver domain BKM79_RS05070 PF00158 Sigma-54 interaction domain BKM79_RS05115 PF00873 AcrB/AcrD/AcrF family BKM79_RS05125 PF04376 Arginine-tRNA-protein transferase, N terminus BKM79_RS05125 PF04377 Arginine-tRNA-protein transferase, C terminus BKM79_RS05135 PF00289 Biotin carboxylase, N-terminal domain BKM79_RS05135 PF02785 Biotin carboxylase C-terminal domain BKM79_RS05135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKM79_RS05145 PF04101 Glycosyltransferase family 28 C-terminal domain BKM79_RS05145 PF03033 Glycosyltransferase family 28 N-terminal domain BKM79_RS05165 PF02581 Thiamine monophosphate synthase BKM79_RS05170 PF06968 Biotin and Thiamin Synthesis associated domain BKM79_RS05170 PF04055 Radical SAM superfamily BKM79_RS05175 PF05690 Thiazole biosynthesis protein ThiG BKM79_RS05180 PF00899 ThiF family BKM79_RS05180 PF00581 Rhodanese-like domain BKM79_RS05200 PF02146 Sir2 family BKM79_RS05220 PF02875 Mur ligase family, glutamate ligase domain BKM79_RS05220 PF08245 Mur ligase middle domain BKM79_RS05220 PF01225 Mur ligase family, catalytic domain BKM79_RS05240 PF00571 CBS domain BKM79_RS05240 PF00478 IMP dehydrogenase / GMP reductase domain BKM79_RS05245 PF01425 Amidase BKM79_RS05255 PF00133 tRNA synthetases class I (I, L, M and V) BKM79_RS05255 PF08264 Anticodon-binding domain of tRNA BKM79_RS05265 PF00583 Acetyltransferase (GNAT) family BKM79_RS05270 PF00881 Nitroreductase family BKM79_RS05285 PF17820 PDZ domain BKM79_RS05285 PF02163 Peptidase family M50 BKM79_RS05295 PF01250 Ribosomal protein S6 BKM79_RS05300 PF00436 Single-strand binding protein family BKM79_RS05310 PF02190 ATP-dependent protease La (LON) substrate-binding domain BKM79_RS05310 PF05362 Lon protease (S16) C-terminal proteolytic domain BKM79_RS05310 PF00004 ATPase family associated with various cellular activities (AAA) BKM79_RS05320 PF02623 FliW protein BKM79_RS05325 PF14748 Pyrroline-5-carboxylate reductase dimerisation BKM79_RS05325 PF03807 NADP oxidoreductase coenzyme F420-dependent BKM79_RS05350 PF02581 Thiamine monophosphate synthase BKM79_RS05355 PF08543 Phosphomethylpyrimidine kinase BKM79_RS05370 PF02559 CarD-like/TRCF domain BKM79_RS05370 PF00270 DEAD/DEAH box helicase BKM79_RS05370 PF00271 Helicase conserved C-terminal domain BKM79_RS05370 PF17757 UvrB interaction domain BKM79_RS05370 PF03461 TRCF domain BKM79_RS05380 PF04225 Opacity-associated protein A LysM-like domain BKM79_RS05380 PF01551 Peptidase family M23 BKM79_RS05410 PF07549 SecD/SecF GG Motif BKM79_RS05410 PF02355 Protein export membrane protein BKM79_RS05415 PF02355 Protein export membrane protein BKM79_RS05420 PF02699 Preprotein translocase subunit BKM79_RS05430 PF02772 S-adenosylmethionine synthetase, central domain BKM79_RS05430 PF02773 S-adenosylmethionine synthetase, C-terminal domain BKM79_RS05430 PF00438 S-adenosylmethionine synthetase, N-terminal domain BKM79_RS05435 PF00375 Sodium:dicarboxylate symporter family BKM79_RS05440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BKM79_RS05440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BKM79_RS05445 PF08439 Oligopeptidase F BKM79_RS05445 PF01432 Peptidase family M3 BKM79_RS05460 PF01509 TruB family pseudouridylate synthase (N terminal domain) BKM79_RS05465 PF02599 Global regulator protein family BKM79_RS05470 PF00288 GHMP kinases N terminal domain BKM79_RS05475 PF01668 SmpB protein BKM79_RS05485 PF02617 ATP-dependent Clp protease adaptor protein ClpS BKM79_RS05490 PF17871 AAA lid domain BKM79_RS05490 PF07724 AAA domain (Cdc48 subfamily) BKM79_RS05490 PF02861 Clp amino terminal domain, pathogenicity island component BKM79_RS05490 PF10431 C-terminal, D2-small domain, of ClpB protein BKM79_RS05490 PF00004 ATPase family associated with various cellular activities (AAA) BKM79_RS05495 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BKM79_RS05505 PF01914 MarC family integral membrane protein BKM79_RS05510 PF01641 SelR domain BKM79_RS05515 PF04305 Protein of unknown function (DUF455) BKM79_RS05520 PF01066 CDP-alcohol phosphatidyltransferase BKM79_RS05530 PF00004 ATPase family associated with various cellular activities (AAA) BKM79_RS05530 PF17862 AAA+ lid domain BKM79_RS05530 PF01434 Peptidase family M41 BKM79_RS05540 PF00072 Response regulator receiver domain BKM79_RS05555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BKM79_RS05565 PF00132 Bacterial transferase hexapeptide (six repeats) BKM79_RS05565 PF17836 PglD N-terminal domain BKM79_RS05570 PF02397 Bacterial sugar transferase BKM79_RS05575 PF00534 Glycosyl transferases group 1 BKM79_RS05575 PF13477 Glycosyl transferase 4-like BKM79_RS05585 PF13439 Glycosyltransferase Family 4 BKM79_RS05585 PF00534 Glycosyl transferases group 1 BKM79_RS05590 PF00535 Glycosyl transferase family 2 BKM79_RS05595 PF00534 Glycosyl transferases group 1 BKM79_RS05595 PF13439 Glycosyltransferase Family 4 BKM79_RS05605 PF16363 GDP-mannose 4,6 dehydratase BKM79_RS05615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BKM79_RS05625 PF00535 Glycosyl transferase family 2 BKM79_RS05630 PF00535 Glycosyl transferase family 2 BKM79_RS05630 PF01501 Glycosyl transferase family 8 BKM79_RS05640 PF00535 Glycosyl transferase family 2 BKM79_RS05640 PF01501 Glycosyl transferase family 8 BKM79_RS05650 PF06002 Alpha-2,3-sialyltransferase (CST-I) BKM79_RS05655 PF08666 SAF domain BKM79_RS05655 PF03102 NeuB family BKM79_RS05670 PF02348 Cytidylyltransferase BKM79_RS05670 PF13472 GDSL-like Lipase/Acylhydrolase family BKM79_RS05680 PF00535 Glycosyl transferase family 2 BKM79_RS05690 PF13580 SIS domain BKM79_RS05695 PF00294 pfkB family carbohydrate kinase BKM79_RS05695 PF01467 Cytidylyltransferase-like BKM79_RS05700 PF01370 NAD dependent epimerase/dehydratase family BKM79_RS05705 PF08645 Polynucleotide kinase 3 phosphatase BKM79_RS05720 PF00403 Heavy-metal-associated domain BKM79_RS05725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BKM79_RS05725 PF07497 Rho termination factor, RNA-binding domain BKM79_RS05725 PF07498 Rho termination factor, N-terminal domain BKM79_RS05760 PF06738 Putative threonine/serine exporter BKM79_RS05760 PF12821 Threonine/Serine exporter, ThrE BKM79_RS05775 PF09335 SNARE associated Golgi protein BKM79_RS05790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BKM79_RS05795 PF01709 Transcriptional regulator BKM79_RS05800 PF00893 Small Multidrug Resistance protein BKM79_RS05805 PF00893 Small Multidrug Resistance protein BKM79_RS05820 PF00625 Guanylate kinase BKM79_RS05830 PF01311 Bacterial export proteins, family 1 BKM79_RS05840 PF00889 Elongation factor TS BKM79_RS05845 PF00318 Ribosomal protein S2 BKM79_RS05865 PF00355 Rieske [2Fe-2S] domain BKM79_RS05865 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BKM79_RS05870 PF02040 Arsenical pump membrane protein BKM79_RS05875 PF01134 Glucose inhibited division protein A BKM79_RS05875 PF13932 GidA associated domain BKM79_RS05885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKM79_RS05885 PF08447 PAS fold BKM79_RS05885 PF13426 PAS domain BKM79_RS05895 PF00375 Sodium:dicarboxylate symporter family BKM79_RS05910 PF01979 Amidohydrolase family BKM79_RS05915 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BKM79_RS05915 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BKM79_RS05920 PF02637 GatB domain BKM79_RS05920 PF02934 GatB/GatE catalytic domain BKM79_RS05925 PF02664 S-Ribosylhomocysteinase (LuxS) BKM79_RS05935 PF03180 NLPA lipoprotein BKM79_RS05940 PF08267 Cobalamin-independent synthase, N-terminal domain BKM79_RS05940 PF01717 Cobalamin-independent synthase, Catalytic domain BKM79_RS05945 PF02219 Methylenetetrahydrofolate reductase BKM79_RS05955 PF00119 ATP synthase A chain BKM79_RS05960 PF18073 Rubredoxin metal binding domain BKM79_RS05965 PF00448 SRP54-type protein, GTPase domain BKM79_RS05980 PF12072 Domain of unknown function (DUF3552) BKM79_RS05980 PF01966 HD domain BKM79_RS05995 PF03631 Virulence factor BrkB BKM79_RS06000 PF02913 FAD linked oxidases, C-terminal domain BKM79_RS06000 PF01565 FAD binding domain BKM79_RS06010 PF08525 Opacity-associated protein A N-terminal motif BKM79_RS06010 PF01551 Peptidase family M23 BKM79_RS06010 PF01476 LysM domain BKM79_RS06020 PF02578 Multi-copper polyphenol oxidoreductase laccase BKM79_RS06025 PF00677 Lumazine binding domain BKM79_RS06035 PF00166 Chaperonin 10 Kd subunit BKM79_RS06040 PF00118 TCP-1/cpn60 chaperonin family BKM79_RS06050 PF00486 Transcriptional regulatory protein, C terminal BKM79_RS06050 PF00072 Response regulator receiver domain BKM79_RS06075 PF00072 Response regulator receiver domain BKM79_RS06075 PF00486 Transcriptional regulatory protein, C terminal BKM79_RS06080 PF00595 PDZ domain BKM79_RS06085 PF01556 DnaJ C terminal domain BKM79_RS06085 PF00226 DnaJ domain BKM79_RS06090 PF13411 MerR HTH family regulatory protein BKM79_RS06095 PF02254 TrkA-N domain BKM79_RS06095 PF00999 Sodium/hydrogen exchanger family BKM79_RS06105 PF13419 Haloacid dehalogenase-like hydrolase BKM79_RS06125 PF02541 Ppx/GppA phosphatase family BKM79_RS06130 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BKM79_RS06145 PF07690 Major Facilitator Superfamily BKM79_RS06155 PF01208 Uroporphyrinogen decarboxylase (URO-D) BKM79_RS06160 PF04055 Radical SAM superfamily BKM79_RS06180 PF02540 NAD synthase BKM79_RS06180 PF00117 Glutamine amidotransferase class-I BKM79_RS06180 PF00958 GMP synthase C terminal domain BKM79_RS06190 PF02844 Phosphoribosylglycinamide synthetase, N domain BKM79_RS06190 PF02843 Phosphoribosylglycinamide synthetase, C domain BKM79_RS06190 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BKM79_RS06205 PF03725 3' exoribonuclease family, domain 2 BKM79_RS06205 PF01138 3' exoribonuclease family, domain 1 BKM79_RS06205 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BKM79_RS06205 PF00575 S1 RNA binding domain BKM79_RS06205 PF00013 KH domain BKM79_RS06215 PF01361 Tautomerase enzyme BKM79_RS06225 PF07690 Major Facilitator Superfamily BKM79_RS06230 PF01451 Low molecular weight phosphotyrosine protein phosphatase BKM79_RS06235 PF05538 Campylobacter major outer membrane protein BKM79_RS06240 PF00684 DnaJ central domain BKM79_RS06240 PF01556 DnaJ C terminal domain BKM79_RS06240 PF00226 DnaJ domain BKM79_RS06245 PF00486 Transcriptional regulatory protein, C terminal BKM79_RS06245 PF00072 Response regulator receiver domain BKM79_RS06255 PF02132 RecR protein BKM79_RS06255 PF13662 Toprim domain BKM79_RS06260 PF01750 Hydrogenase maturation protease BKM79_RS06265 PF01292 Prokaryotic cytochrome b561 BKM79_RS06270 PF00374 Nickel-dependent hydrogenase BKM79_RS06275 PF10518 TAT (twin-arginine translocation) pathway signal sequence BKM79_RS06275 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BKM79_RS06275 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BKM79_RS06285 PF11741 AMIN domain BKM79_RS06285 PF01520 N-acetylmuramoyl-L-alanine amidase BKM79_RS06295 PF00579 tRNA synthetases class I (W and Y) BKM79_RS06300 PF02824 TGS domain BKM79_RS06300 PF04607 Region found in RelA / SpoT proteins BKM79_RS06300 PF13291 ACT domain BKM79_RS06305 PF01192 RNA polymerase Rpb6 BKM79_RS06310 PF00696 Amino acid kinase family BKM79_RS06325 PF09383 NIL domain BKM79_RS06325 PF00005 ABC transporter BKM79_RS06340 PF01479 S4 domain BKM79_RS06340 PF00849 RNA pseudouridylate synthase BKM79_RS06360 PF02386 Cation transport protein BKM79_RS06365 PF02254 TrkA-N domain BKM79_RS06365 PF02080 TrkA-C domain BKM79_RS06370 PF02621 Menaquinone biosynthesis BKM79_RS06380 PF03949 Malic enzyme, NAD binding domain BKM79_RS06380 PF00390 Malic enzyme, N-terminal domain BKM79_RS06380 PF01515 Phosphate acetyl/butaryl transferase BKM79_RS06385 PF00749 tRNA synthetases class I (E and Q), catalytic domain BKM79_RS06395 PF00289 Biotin carboxylase, N-terminal domain BKM79_RS06395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BKM79_RS06395 PF02785 Biotin carboxylase C-terminal domain BKM79_RS06400 PF00364 Biotin-requiring enzyme BKM79_RS06405 PF00692 dUTPase BKM79_RS06410 PF02719 Polysaccharide biosynthesis protein BKM79_RS06420 PF16221 winged helix-turn-helix BKM79_RS06420 PF16254 Domain of unknown function (DUF4910) BKM79_RS06420 PF09940 Domain of unknown function (DUF2172) BKM79_RS06455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BKM79_RS06455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BKM79_RS06480 PF00550 Phosphopantetheine attachment site BKM79_RS06480 PF13193 AMP-binding enzyme C-terminal domain BKM79_RS06480 PF00501 AMP-binding enzyme BKM79_RS06480 PF00668 Condensation domain BKM79_RS06500 PF02348 Cytidylyltransferase BKM79_RS06510 PF13302 Acetyltransferase (GNAT) domain BKM79_RS06515 PF00977 Histidine biosynthesis protein BKM79_RS06520 PF00117 Glutamine amidotransferase class-I BKM79_RS06530 PF08666 SAF domain BKM79_RS06530 PF03102 NeuB family BKM79_RS06540 PF16363 GDP-mannose 4,6 dehydratase BKM79_RS06545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BKM79_RS06575 PF03102 NeuB family BKM79_RS06575 PF08666 SAF domain BKM79_RS06580 PF02350 UDP-N-acetylglucosamine 2-epimerase BKM79_RS06585 PF00483 Nucleotidyl transferase BKM79_RS06595 PF02348 Cytidylyltransferase BKM79_RS06625 PF00669 Bacterial flagellin N-terminal helical region BKM79_RS06625 PF07196 Flagellin hook IN motif BKM79_RS06625 PF00700 Bacterial flagellin C-terminal helical region BKM79_RS06630 PF00700 Bacterial flagellin C-terminal helical region BKM79_RS06630 PF07196 Flagellin hook IN motif BKM79_RS06630 PF00669 Bacterial flagellin N-terminal helical region BKM79_RS06645 PF07963 Prokaryotic N-terminal methylation motif BKM79_RS06645 PF08334 Type II secretion system (T2SS), protein G BKM79_RS06650 PF00814 Glycoprotease family BKM79_RS06660 PF13288 DXP reductoisomerase C-terminal domain BKM79_RS06660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BKM79_RS06660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BKM79_RS06675 PF05670 NFACT protein RNA binding domain BKM79_RS06680 PF12804 MobA-like NTP transferase domain BKM79_RS06685 PF02253 Phospholipase A1 BKM79_RS06690 PF01032 FecCD transport family BKM79_RS06695 PF01032 FecCD transport family BKM79_RS06705 PF01497 Periplasmic binding protein BKM79_RS06720 PF02335 Cytochrome c552 BKM79_RS06725 PF03264 NapC/NirT cytochrome c family, N-terminal region BKM79_RS06730 PF02503 Polyphosphate kinase middle domain BKM79_RS06730 PF13090 Polyphosphate kinase C-terminal domain 2 BKM79_RS06730 PF17941 Polyphosphate kinase C-terminal domain 1 BKM79_RS06730 PF13089 Polyphosphate kinase N-terminal domain BKM79_RS06745 PF17864 RuvB AAA lid domain BKM79_RS06745 PF05491 RuvB C-terminal winged helix domain BKM79_RS06745 PF05496 Holliday junction DNA helicase RuvB P-loop domain BKM79_RS06750 PF01594 AI-2E family transporter BKM79_RS06755 PF00206 Lyase BKM79_RS06755 PF10415 Fumarase C C-terminus BKM79_RS06765 PF01380 SIS domain BKM79_RS06775 PF04055 Radical SAM superfamily BKM79_RS06780 PF00860 Permease family BKM79_RS06785 PF00156 Phosphoribosyl transferase domain BKM79_RS06790 PF04333 MlaA lipoprotein BKM79_RS06805 PF01725 Ham1 family BKM79_RS06810 PF07690 Major Facilitator Superfamily BKM79_RS06835 PF13098 Thioredoxin-like domain BKM79_RS06845 PF00258 Flavodoxin BKM79_RS06875 PF01042 Endoribonuclease L-PSP BKM79_RS06890 PF10397 Adenylosuccinate lyase C-terminus BKM79_RS06890 PF00206 Lyase BKM79_RS06900 PF04023 FeoA domain BKM79_RS06910 PF10518 TAT (twin-arginine translocation) pathway signal sequence BKM79_RS06910 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BKM79_RS06910 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BKM79_RS06920 PF00121 Triosephosphate isomerase BKM79_RS06930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BKM79_RS06930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BKM79_RS06935 PF01467 Cytidylyltransferase-like BKM79_RS06950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BKM79_RS06950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BKM79_RS06950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BKM79_RS06950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BKM79_RS06955 PF03748 Flagellar basal body-associated protein FliL BKM79_RS06960 PF01648 4'-phosphopantetheinyl transferase superfamily BKM79_RS06985 PF05159 Capsule polysaccharide biosynthesis protein BKM79_RS06995 PF00483 Nucleotidyl transferase BKM79_RS07000 PF00117 Glutamine amidotransferase class-I BKM79_RS07010 PF01209 ubiE/COQ5 methyltransferase family BKM79_RS07065 PF13419 Haloacid dehalogenase-like hydrolase BKM79_RS07095 PF01467 Cytidylyltransferase-like BKM79_RS07100 PF01380 SIS domain BKM79_RS07100 PF00571 CBS domain BKM79_RS07105 PF02563 Polysaccharide biosynthesis/export protein BKM79_RS07105 PF10531 SLBB domain BKM79_RS07115 PF00005 ABC transporter BKM79_RS07120 PF01061 ABC-2 type transporter BKM79_RS07145 PF01171 PP-loop family BKM79_RS07150 PF00919 Uncharacterized protein family UPF0004 BKM79_RS07150 PF04055 Radical SAM superfamily BKM79_RS07155 PF03462 PCRF domain BKM79_RS07155 PF00472 RF-1 domain BKM79_RS07190 PF02119 Flagellar P-ring protein BKM79_RS07245 PF00263 Bacterial type II and III secretion system protein BKM79_RS07245 PF07655 Secretin N-terminal domain BKM79_RS07260 PF13419 Haloacid dehalogenase-like hydrolase BKM79_RS07265 PF00691 OmpA family BKM79_RS07265 PF05736 OprF membrane domain BKM79_RS07270 PF00380 Ribosomal protein S9/S16 BKM79_RS07275 PF00572 Ribosomal protein L13 BKM79_RS07310 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BKM79_RS07310 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BKM79_RS07325 PF00115 Cytochrome C and Quinol oxidase polypeptide I BKM79_RS07330 PF00486 Transcriptional regulatory protein, C terminal BKM79_RS07330 PF00072 Response regulator receiver domain BKM79_RS07335 PF08448 PAS fold BKM79_RS07335 PF08447 PAS fold BKM79_RS07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BKM79_RS07345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BKM79_RS07345 PF00117 Glutamine amidotransferase class-I BKM79_RS07365 PF00709 Adenylosuccinate synthetase BKM79_RS07375 PF04143 Sulphur transport BKM79_RS07380 PF01206 Sulfurtransferase TusA BKM79_RS07385 PF00474 Sodium:solute symporter family BKM79_RS07390 PF14850 DNA-binding domain of Proline dehydrogenase BKM79_RS07390 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BKM79_RS07390 PF01619 Proline dehydrogenase BKM79_RS07390 PF00171 Aldehyde dehydrogenase family BKM79_RS07405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKM79_RS07405 PF13426 PAS domain BKM79_RS07405 PF08447 PAS fold BKM79_RS07425 PF13247 4Fe-4S dicluster domain BKM79_RS07430 PF00384 Molybdopterin oxidoreductase BKM79_RS07430 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKM79_RS07430 PF01568 Molydopterin dinucleotide binding domain BKM79_RS07440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BKM79_RS07440 PF00384 Molybdopterin oxidoreductase BKM79_RS07440 PF01568 Molydopterin dinucleotide binding domain BKM79_RS07440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BKM79_RS07440 PF00037 4Fe-4S binding domain BKM79_RS07455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BKM79_RS07475 PF00994 Probable molybdopterin binding domain BKM79_RS07475 PF03454 MoeA C-terminal region (domain IV) BKM79_RS07475 PF03453 MoeA N-terminal region (domain I and II) BKM79_RS07480 PF09827 CRISPR associated protein Cas2 BKM79_RS07485 PF01867 CRISPR associated protein Cas1 BKM79_RS07490 PF18541 RuvC endonuclease subdomain 3 BKM79_RS07490 PF13395 HNH endonuclease BKM79_RS07505 PF02769 AIR synthase related protein, C-terminal domain BKM79_RS07505 PF00586 AIR synthase related protein, N-terminal domain BKM79_RS07510 PF01121 Dephospho-CoA kinase BKM79_RS07525 PF00210 Ferritin-like domain BKM79_RS07530 PF00342 Phosphoglucose isomerase BKM79_RS07535 PF00483 Nucleotidyl transferase BKM79_RS07540 PF16177 Acetyl-coenzyme A synthetase N-terminus BKM79_RS07540 PF13193 AMP-binding enzyme C-terminal domain BKM79_RS07540 PF00501 AMP-binding enzyme BKM79_RS07550 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS07555 PF12849 PBP superfamily domain BKM79_RS07560 PF03746 LamB/YcsF family BKM79_RS07565 PF02682 Carboxyltransferase domain, subdomain C and D BKM79_RS07570 PF02626 Carboxyltransferase domain, subdomain A and B BKM79_RS07580 PF02525 Flavodoxin-like fold BKM79_RS07585 PF01638 HxlR-like helix-turn-helix BKM79_RS07620 PF02384 N-6 DNA Methylase BKM79_RS07630 PF13460 NAD(P)H-binding BKM79_RS07635 PF01638 HxlR-like helix-turn-helix BKM79_RS07655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BKM79_RS07655 PF17200 Single Cache domain 2 BKM79_RS07655 PF00672 HAMP domain BKM79_RS07665 PF00361 Proton-conducting membrane transporter BKM79_RS07670 PF00361 Proton-conducting membrane transporter BKM79_RS07675 PF00361 Proton-conducting membrane transporter BKM79_RS07675 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BKM79_RS07680 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BKM79_RS07685 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BKM79_RS07690 PF12838 4Fe-4S dicluster domain BKM79_RS07695 PF00146 NADH dehydrogenase BKM79_RS07715 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BKM79_RS07720 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BKM79_RS07725 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BKM79_RS07730 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BKM79_RS07740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BKM79_RS07740 PF00005 ABC transporter BKM79_RS07745 PF12911 N-terminal TM domain of oligopeptide transport permease C BKM79_RS07745 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS07750 PF00528 Binding-protein-dependent transport system inner membrane component BKM79_RS07765 PF00042 Globin BKM79_RS07765 PF00970 Oxidoreductase FAD-binding domain BKM79_RS07765 PF00175 Oxidoreductase NAD-binding domain BKM79_RS07770 PF00005 ABC transporter BKM79_RS07780 PF00753 Metallo-beta-lactamase superfamily BKM79_RS07785 PF01176 Translation initiation factor 1A / IF-1 BKM79_RS07790 PF00444 Ribosomal protein L36 BKM79_RS07795 PF00416 Ribosomal protein S13/S18 BKM79_RS07800 PF00411 Ribosomal protein S11 BKM79_RS07805 PF01479 S4 domain BKM79_RS07805 PF00163 Ribosomal protein S4/S9 N-terminal domain BKM79_RS07810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BKM79_RS07810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BKM79_RS07810 PF01000 RNA polymerase Rpb3/RpoA insert domain BKM79_RS07815 PF01196 Ribosomal protein L17 BKM79_RS07820 PF08029 HisG, C-terminal domain BKM79_RS07820 PF01634 ATP phosphoribosyltransferase BKM79_RS07825 PF00815 Histidinol dehydrogenase BKM79_RS07830 PF08645 Polynucleotide kinase 3 phosphatase BKM79_RS07830 PF00475 Imidazoleglycerol-phosphate dehydratase BKM79_RS07835 PF00117 Glutamine amidotransferase class-I BKM79_RS07840 PF00977 Histidine biosynthesis protein BKM79_RS07850 PF00977 Histidine biosynthesis protein BKM79_RS07855 PF01502 Phosphoribosyl-AMP cyclohydrolase BKM79_RS07855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BKM79_RS07860 PF14602 Hexapeptide repeat of succinyl-transferase BKM79_RS07860 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BKM79_RS07865 PF01883 Iron-sulfur cluster assembly protein BKM79_RS07865 PF10609 NUBPL iron-transfer P-loop NTPase BKM79_RS07870 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BKM79_RS07870 PF02542 YgbB family BKM79_RS07875 PF14306 PUA-like domain BKM79_RS07875 PF01747 ATP-sulfurylase BKM79_RS07880 PF04608 Phosphatidylglycerophosphatase A BKM79_RS07890 PF00472 RF-1 domain BKM79_RS07890 PF03462 PCRF domain BKM79_RS07900 PF07715 TonB-dependent Receptor Plug Domain BKM79_RS07900 PF00593 TonB dependent receptor BKM79_RS07905 PF01032 FecCD transport family BKM79_RS07910 PF00005 ABC transporter BKM79_RS07925 PF00083 Sugar (and other) transporter BKM79_RS07960 PF01872 RibD C-terminal domain BKM79_RS07960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BKM79_RS07970 PF03315 Serine dehydratase beta chain BKM79_RS07970 PF03313 Serine dehydratase alpha chain BKM79_RS07990 PF01618 MotA/TolQ/ExbB proton channel family BKM79_RS07995 PF02472 Biopolymer transport protein ExbD/TolR BKM79_RS08020 PF01264 Chorismate synthase BKM79_RS08025 PF00035 Double-stranded RNA binding motif BKM79_RS08025 PF14622 Ribonuclease-III-like BKM79_RS08030 PF00075 RNase H BKM79_RS08055 PF02875 Mur ligase family, glutamate ligase domain BKM79_RS08055 PF08245 Mur ligase middle domain BKM79_RS08060 PF02575 YbaB/EbfC DNA-binding family BKM79_RS08070 PF00348 Polyprenyl synthetase BKM79_RS08075 PF00456 Transketolase, thiamine diphosphate binding domain BKM79_RS08075 PF02780 Transketolase, C-terminal domain BKM79_RS08075 PF02779 Transketolase, pyrimidine binding domain BKM79_RS08080 PF02405 Permease MlaE BKM79_RS08105 PF00557 Metallopeptidase family M24 BKM79_RS08110 PF01177 Asp/Glu/Hydantoin racemase BKM79_RS08115 PF00877 NlpC/P60 family BKM79_RS08145 PF10634 Fe2+ transport protein BKM79_RS08165 PF00005 ABC transporter BKM79_RS08230 PF03952 Enolase, N-terminal domain BKM79_RS08230 PF00113 Enolase, C-terminal TIM barrel domain BKM79_RS08235 PF00154 recA bacterial DNA recombination protein BKM79_RS08245 PF01313 Bacterial export proteins, family 3 BKM79_RS08250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BKM79_RS08270 PF00459 Inositol monophosphatase family BKM79_RS08275 PF00285 Citrate synthase, C-terminal domain BKM79_RS08285 PF06968 Biotin and Thiamin Synthesis associated domain BKM79_RS08285 PF04055 Radical SAM superfamily BKM79_RS08290 PF01751 Toprim domain BKM79_RS08290 PF01396 Topoisomerase DNA binding C4 zinc finger BKM79_RS08290 PF01131 DNA topoisomerase BKM79_RS08300 PF00344 SecY translocase BKM79_RS08305 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BKM79_RS08310 PF03719 Ribosomal protein S5, C-terminal domain BKM79_RS08310 PF00333 Ribosomal protein S5, N-terminal domain BKM79_RS08320 PF00347 Ribosomal protein L6 BKM79_RS08325 PF00410 Ribosomal protein S8 BKM79_RS08330 PF00253 Ribosomal protein S14p/S29e BKM79_RS08335 PF00673 ribosomal L5P family C-terminus BKM79_RS08335 PF00281 Ribosomal protein L5 BKM79_RS08340 PF00467 KOW motif BKM79_RS08340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BKM79_RS08345 PF00238 Ribosomal protein L14p/L23e BKM79_RS08350 PF00366 Ribosomal protein S17 BKM79_RS08355 PF00831 Ribosomal L29 protein BKM79_RS08360 PF00252 Ribosomal protein L16p/L10e BKM79_RS08365 PF00189 Ribosomal protein S3, C-terminal domain BKM79_RS08365 PF07650 KH domain BKM79_RS08370 PF00237 Ribosomal protein L22p/L17e BKM79_RS08375 PF00203 Ribosomal protein S19 BKM79_RS08380 PF03947 Ribosomal Proteins L2, C-terminal domain BKM79_RS08380 PF00181 Ribosomal Proteins L2, RNA binding domain BKM79_RS08385 PF00276 Ribosomal protein L23 BKM79_RS08390 PF00573 Ribosomal protein L4/L1 family BKM79_RS08395 PF00297 Ribosomal protein L3 BKM79_RS08400 PF00338 Ribosomal protein S10p/S20e BKM79_RS08405 PF00849 RNA pseudouridylate synthase BKM79_RS08405 PF01479 S4 domain BKM79_RS08410 PF00753 Metallo-beta-lactamase superfamily BKM79_RS08410 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BKM79_RS08410 PF17770 Ribonuclease J C-terminal domain BKM79_RS08415 PF00398 Ribosomal RNA adenine dimethylase BKM79_RS08425 PF04055 Radical SAM superfamily BKM79_RS08460 PF00694 Aconitase C-terminal domain BKM79_RS08465 PF00330 Aconitase family (aconitate hydratase) BKM79_RS08475 PF00682 HMGL-like BKM79_RS08475 PF08502 LeuA allosteric (dimerisation) domain BKM79_RS08490 PF14489 QueF-like protein BKM79_RS08495 PF07559 Flagellar basal body protein FlaE BKM79_RS08495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BKM79_RS08495 PF00460 Flagella basal body rod protein BKM79_RS08495 PF07196 Flagellin hook IN motif BKM79_RS08500 PF02075 Crossover junction endodeoxyribonuclease RuvC