RC12_RS00135	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RC12_RS00135	PWY-6148	tetrahydromethanopterin biosynthesis
RC12_RS00135	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RC12_RS00135	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RC12_RS00140	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RC12_RS00140	PWY-6416	quinate degradation II
RC12_RS00140	PWY-6707	gallate biosynthesis
RC12_RS00235	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RC12_RS00235	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RC12_RS00245	PWY-5392	reductive TCA cycle II
RC12_RS00245	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RC12_RS00245	PWY-5690	TCA cycle II (plants and fungi)
RC12_RS00245	PWY-5913	TCA cycle VI (obligate autotrophs)
RC12_RS00245	PWY-6728	methylaspartate cycle
RC12_RS00245	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RC12_RS00245	PWY-7254	TCA cycle VII (acetate-producers)
RC12_RS00245	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RC12_RS00295	PWY-3341	L-proline biosynthesis III
RC12_RS00295	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RC12_RS00335	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS00345	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS00390	PWY-4381	fatty acid biosynthesis initiation I
RC12_RS00390	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RC12_RS00390	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RC12_RS00395	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RC12_RS00395	PWY-6153	autoinducer AI-2 biosynthesis I
RC12_RS00395	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
RC12_RS00450	PWY-6825	phosphatidylcholine biosynthesis V
RC12_RS00455	PWY-4381	fatty acid biosynthesis initiation I
RC12_RS00455	PWY-5743	3-hydroxypropanoate cycle
RC12_RS00455	PWY-5744	glyoxylate assimilation
RC12_RS00455	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RC12_RS00455	PWY-6679	jadomycin biosynthesis
RC12_RS00455	PWY-6722	candicidin biosynthesis
RC12_RS00455	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RC12_RS00470	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
RC12_RS00480	PWY-2201	folate transformations I
RC12_RS00480	PWY-5497	purine nucleobases degradation II (anaerobic)
RC12_RS00490	PWY-702	L-methionine biosynthesis II
RC12_RS00600	PWY-2201	folate transformations I
RC12_RS00610	PWY-2201	folate transformations I
RC12_RS00630	PWY-6703	preQ<sub>0</sub> biosynthesis
RC12_RS00635	PWY-6823	molybdenum cofactor biosynthesis
RC12_RS00655	PWY-2781	<i>cis</i>-zeatin biosynthesis
RC12_RS00675	PWY-6854	ethylene biosynthesis III (microbes)
RC12_RS00730	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RC12_RS00730	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RC12_RS00735	PWY-6938	NADH repair
RC12_RS00765	PWY-5663	tetrahydrobiopterin biosynthesis I
RC12_RS00765	PWY-5664	tetrahydrobiopterin biosynthesis II
RC12_RS00765	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RC12_RS00765	PWY-6703	preQ<sub>0</sub> biosynthesis
RC12_RS00765	PWY-6983	tetrahydrobiopterin biosynthesis III
RC12_RS00765	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RC12_RS00770	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS00775	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RC12_RS00775	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RC12_RS00775	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RC12_RS00775	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RC12_RS00780	PWY-2941	L-lysine biosynthesis II
RC12_RS00780	PWY-2942	L-lysine biosynthesis III
RC12_RS00780	PWY-5097	L-lysine biosynthesis VI
RC12_RS00810	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
RC12_RS00845	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RC12_RS00845	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RC12_RS00855	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RC12_RS00855	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RC12_RS00875	PWY-5381	pyridine nucleotide cycling (plants)
RC12_RS00880	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RC12_RS00880	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RC12_RS00880	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RC12_RS00880	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RC12_RS00880	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RC12_RS00880	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RC12_RS00880	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RC12_RS00880	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RC12_RS00890	PWY-5686	UMP biosynthesis
RC12_RS00910	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
RC12_RS00910	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RC12_RS00910	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
RC12_RS00910	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RC12_RS00925	PWY-6823	molybdenum cofactor biosynthesis
RC12_RS00925	PWY-6891	thiazole biosynthesis II (Bacillus)
RC12_RS00925	PWY-6892	thiazole biosynthesis I (E. coli)
RC12_RS00925	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RC12_RS01005	PWY-7039	phosphatidate metabolism, as a signaling molecule
RC12_RS01015	PWY-5686	UMP biosynthesis
RC12_RS01150	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RC12_RS01325	PWY-4983	L-citrulline-nitric oxide cycle
RC12_RS01325	PWY-4984	urea cycle
RC12_RS01325	PWY-5	canavanine biosynthesis
RC12_RS01325	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RC12_RS01325	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RC12_RS01470	PWY-5057	L-valine degradation II
RC12_RS01470	PWY-5076	L-leucine degradation III
RC12_RS01470	PWY-5078	L-isoleucine degradation II
RC12_RS01470	PWY-5101	L-isoleucine biosynthesis II
RC12_RS01470	PWY-5103	L-isoleucine biosynthesis III
RC12_RS01470	PWY-5104	L-isoleucine biosynthesis IV
RC12_RS01470	PWY-5108	L-isoleucine biosynthesis V
RC12_RS01490	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RC12_RS01490	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RC12_RS01490	PWY-5989	stearate biosynthesis II (bacteria and plants)
RC12_RS01490	PWY-5994	palmitate biosynthesis I (animals and fungi)
RC12_RS01490	PWY-6113	superpathway of mycolate biosynthesis
RC12_RS01490	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RC12_RS01490	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RC12_RS01490	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RC12_RS01490	PWY-7663	gondoate biosynthesis (anaerobic)
RC12_RS01490	PWY-7664	oleate biosynthesis IV (anaerobic)
RC12_RS01490	PWYG-321	mycolate biosynthesis
RC12_RS01515	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RC12_RS01515	PWY-5686	UMP biosynthesis
RC12_RS01515	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RC12_RS01525	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RC12_RS01525	PWY-5723	Rubisco shunt
RC12_RS01560	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RC12_RS01560	PWY-622	starch biosynthesis
RC12_RS01575	PWY-5381	pyridine nucleotide cycling (plants)
RC12_RS01575	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RC12_RS01575	PWY-6596	adenosine nucleotides degradation I
RC12_RS01575	PWY-6606	guanosine nucleotides degradation II
RC12_RS01575	PWY-6607	guanosine nucleotides degradation I
RC12_RS01575	PWY-6608	guanosine nucleotides degradation III
RC12_RS01575	PWY-7185	UTP and CTP dephosphorylation I
RC12_RS01610	PWY-2201	folate transformations I
RC12_RS01610	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RC12_RS01630	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RC12_RS01650	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
RC12_RS01660	PWY-2941	L-lysine biosynthesis II
RC12_RS01660	PWY-2942	L-lysine biosynthesis III
RC12_RS01660	PWY-5097	L-lysine biosynthesis VI
RC12_RS01670	PWY-3461	L-tyrosine biosynthesis II
RC12_RS01670	PWY-3462	L-phenylalanine biosynthesis II
RC12_RS01670	PWY-6120	L-tyrosine biosynthesis III
RC12_RS01670	PWY-6627	salinosporamide A biosynthesis
RC12_RS01670	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RC12_RS01670	PWY-7626	bacilysin biosynthesis
RC12_RS01695	PWY-6891	thiazole biosynthesis II (Bacillus)
RC12_RS01695	PWY-6892	thiazole biosynthesis I (E. coli)
RC12_RS01695	PWY-7560	methylerythritol phosphate pathway II
RC12_RS01710	PWY-5839	menaquinol-7 biosynthesis
RC12_RS01710	PWY-5844	menaquinol-9 biosynthesis
RC12_RS01710	PWY-5849	menaquinol-6 biosynthesis
RC12_RS01710	PWY-5890	menaquinol-10 biosynthesis
RC12_RS01710	PWY-5891	menaquinol-11 biosynthesis
RC12_RS01710	PWY-5892	menaquinol-12 biosynthesis
RC12_RS01710	PWY-5895	menaquinol-13 biosynthesis
RC12_RS01730	PWY-4381	fatty acid biosynthesis initiation I
RC12_RS01750	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RC12_RS01750	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RC12_RS01750	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RC12_RS01750	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RC12_RS01750	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RC12_RS01750	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RC12_RS01750	PWY-7205	CMP phosphorylation
RC12_RS01750	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RC12_RS01750	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RC12_RS01750	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS01750	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RC12_RS01750	PWY-7224	purine deoxyribonucleosides salvage
RC12_RS01750	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RC12_RS01750	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RC12_RS01815	PWY-5958	acridone alkaloid biosynthesis
RC12_RS01815	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RC12_RS01815	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RC12_RS01820	PWY-5958	acridone alkaloid biosynthesis
RC12_RS01820	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RC12_RS01820	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RC12_RS01870	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RC12_RS01870	PWY-6148	tetrahydromethanopterin biosynthesis
RC12_RS01870	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RC12_RS01870	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RC12_RS01885	PWY-6749	CMP-legionaminate biosynthesis I
RC12_RS01985	PWY-5686	UMP biosynthesis
RC12_RS01995	PWY-6167	flavin biosynthesis II (archaea)
RC12_RS01995	PWY-6168	flavin biosynthesis III (fungi)
RC12_RS02000	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RC12_RS02000	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RC12_RS02015	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RC12_RS02025	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RC12_RS02040	PWY-1042	glycolysis IV (plant cytosol)
RC12_RS02040	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RC12_RS02040	PWY-5484	glycolysis II (from fructose 6-phosphate)
RC12_RS02040	PWY-5723	Rubisco shunt
RC12_RS02040	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RC12_RS02040	PWY-6886	1-butanol autotrophic biosynthesis
RC12_RS02040	PWY-6901	superpathway of glucose and xylose degradation
RC12_RS02040	PWY-7003	glycerol degradation to butanol
RC12_RS02040	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RC12_RS02040	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RC12_RS02045	PWY-7254	TCA cycle VII (acetate-producers)
RC12_RS02050	PWY-3961	phosphopantothenate biosynthesis II
RC12_RS02090	PWY-1622	formaldehyde assimilation I (serine pathway)
RC12_RS02090	PWY-181	photorespiration
RC12_RS02090	PWY-2161	folate polyglutamylation
RC12_RS02090	PWY-2201	folate transformations I
RC12_RS02090	PWY-3661	glycine betaine degradation I
RC12_RS02090	PWY-3661-1	glycine betaine degradation II (mammalian)
RC12_RS02090	PWY-3841	folate transformations II
RC12_RS02090	PWY-5497	purine nucleobases degradation II (anaerobic)
RC12_RS02105	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RC12_RS02125	PWY-3781	aerobic respiration I (cytochrome c)
RC12_RS02125	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RC12_RS02125	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RC12_RS02125	PWY-5690	TCA cycle II (plants and fungi)
RC12_RS02125	PWY-6728	methylaspartate cycle
RC12_RS02125	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RC12_RS02125	PWY-7254	TCA cycle VII (acetate-producers)
RC12_RS02125	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RC12_RS02130	PWY-3781	aerobic respiration I (cytochrome c)
RC12_RS02130	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RC12_RS02130	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RC12_RS02130	PWY-5690	TCA cycle II (plants and fungi)
RC12_RS02130	PWY-6728	methylaspartate cycle
RC12_RS02130	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RC12_RS02130	PWY-7254	TCA cycle VII (acetate-producers)
RC12_RS02130	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RC12_RS02150	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
RC12_RS02240	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RC12_RS02240	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RC12_RS02245	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RC12_RS02245	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RC12_RS02245	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RC12_RS02250	PWY-1042	glycolysis IV (plant cytosol)
RC12_RS02250	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RC12_RS02250	PWY-5484	glycolysis II (from fructose 6-phosphate)
RC12_RS02250	PWY-5723	Rubisco shunt
RC12_RS02250	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RC12_RS02250	PWY-6886	1-butanol autotrophic biosynthesis
RC12_RS02250	PWY-6901	superpathway of glucose and xylose degradation
RC12_RS02250	PWY-7003	glycerol degradation to butanol
RC12_RS02250	PWY-7124	ethylene biosynthesis V (engineered)
RC12_RS02250	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RC12_RS02260	PWY-5367	petroselinate biosynthesis
RC12_RS02260	PWY-5515	L-arabinose degradation II
RC12_RS02260	PWY-5525	D-glucuronate degradation I
RC12_RS02260	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RC12_RS02260	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RC12_RS02260	PWY-5989	stearate biosynthesis II (bacteria and plants)
RC12_RS02260	PWY-5994	palmitate biosynthesis I (animals and fungi)
RC12_RS02260	PWY-6113	superpathway of mycolate biosynthesis
RC12_RS02260	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RC12_RS02260	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RC12_RS02260	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RC12_RS02260	PWY-7663	gondoate biosynthesis (anaerobic)
RC12_RS02260	PWY-7664	oleate biosynthesis IV (anaerobic)
RC12_RS02260	PWYG-321	mycolate biosynthesis
RC12_RS02265	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RC12_RS02265	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RC12_RS02270	PWY-3781	aerobic respiration I (cytochrome c)
RC12_RS02270	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RC12_RS02270	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RC12_RS02270	PWY-5690	TCA cycle II (plants and fungi)
RC12_RS02270	PWY-6728	methylaspartate cycle
RC12_RS02270	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RC12_RS02270	PWY-7254	TCA cycle VII (acetate-producers)
RC12_RS02270	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RC12_RS02275	PWY-3781	aerobic respiration I (cytochrome c)
RC12_RS02275	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RC12_RS02275	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RC12_RS02275	PWY-5690	TCA cycle II (plants and fungi)
RC12_RS02275	PWY-6728	methylaspartate cycle
RC12_RS02275	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RC12_RS02275	PWY-7254	TCA cycle VII (acetate-producers)
RC12_RS02275	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RC12_RS02285	PWY-6899	base-degraded thiamin salvage
RC12_RS02285	PWY-7356	thiamin salvage IV (yeast)
RC12_RS02300	PWY-4381	fatty acid biosynthesis initiation I
RC12_RS02300	PWY-5743	3-hydroxypropanoate cycle
RC12_RS02300	PWY-5744	glyoxylate assimilation
RC12_RS02300	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RC12_RS02300	PWY-6679	jadomycin biosynthesis
RC12_RS02300	PWY-6722	candicidin biosynthesis
RC12_RS02300	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RC12_RS02330	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RC12_RS02330	PWY-5723	Rubisco shunt
RC12_RS02340	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
RC12_RS02385	PWY-5198	factor 420 biosynthesis
RC12_RS02385	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
RC12_RS02385	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
RC12_RS02600	PWY-6123	inosine-5'-phosphate biosynthesis I
RC12_RS02600	PWY-6124	inosine-5'-phosphate biosynthesis II
RC12_RS02600	PWY-7234	inosine-5'-phosphate biosynthesis III
RC12_RS02605	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RC12_RS02605	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RC12_RS02605	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RC12_RS02610	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RC12_RS02610	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RC12_RS02610	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RC12_RS02620	PWY-5667	CDP-diacylglycerol biosynthesis I
RC12_RS02620	PWY-5981	CDP-diacylglycerol biosynthesis III
RC12_RS02620	PWY-6453	stigma estolide biosynthesis
RC12_RS02620	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RC12_RS02620	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
RC12_RS02620	PWY-7587	oleate biosynthesis III (cyanobacteria)
RC12_RS02620	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
RC12_RS02680	PWY-5913	TCA cycle VI (obligate autotrophs)
RC12_RS02680	PWY-6549	L-glutamine biosynthesis III
RC12_RS02680	PWY-6728	methylaspartate cycle
RC12_RS02680	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RC12_RS02680	PWY-7124	ethylene biosynthesis V (engineered)
RC12_RS02680	PWY-7254	TCA cycle VII (acetate-producers)
RC12_RS02680	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RC12_RS02690	PWY-5392	reductive TCA cycle II
RC12_RS02690	PWY-5537	pyruvate fermentation to acetate V
RC12_RS02690	PWY-5538	pyruvate fermentation to acetate VI
RC12_RS02690	PWY-5690	TCA cycle II (plants and fungi)
RC12_RS02690	PWY-5913	TCA cycle VI (obligate autotrophs)
RC12_RS02690	PWY-6728	methylaspartate cycle
RC12_RS02690	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RC12_RS02690	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RC12_RS02695	PWY-5392	reductive TCA cycle II
RC12_RS02695	PWY-5537	pyruvate fermentation to acetate V
RC12_RS02695	PWY-5538	pyruvate fermentation to acetate VI
RC12_RS02695	PWY-5690	TCA cycle II (plants and fungi)
RC12_RS02695	PWY-5913	TCA cycle VI (obligate autotrophs)
RC12_RS02695	PWY-6728	methylaspartate cycle
RC12_RS02695	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RC12_RS02695	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RC12_RS02735	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RC12_RS02750	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RC12_RS02750	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RC12_RS02755	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
RC12_RS02755	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
RC12_RS02755	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
RC12_RS02755	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
RC12_RS02755	PWY-6978	plastoquinol-9 biosynthesis II
RC12_RS02820	PWY-3341	L-proline biosynthesis III
RC12_RS02820	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RC12_RS02860	PWY-6167	flavin biosynthesis II (archaea)
RC12_RS02860	PWY-6168	flavin biosynthesis III (fungi)
RC12_RS02860	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RC12_RS02870	PWY-5101	L-isoleucine biosynthesis II
RC12_RS02870	PWY-5103	L-isoleucine biosynthesis III
RC12_RS02870	PWY-5104	L-isoleucine biosynthesis IV
RC12_RS02870	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RC12_RS02870	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RC12_RS02870	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RC12_RS02870	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RC12_RS02875	PWY-5101	L-isoleucine biosynthesis II
RC12_RS02875	PWY-5103	L-isoleucine biosynthesis III
RC12_RS02875	PWY-5104	L-isoleucine biosynthesis IV
RC12_RS02875	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RC12_RS02875	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RC12_RS02875	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RC12_RS02875	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RC12_RS02885	PWY-6700	queuosine biosynthesis
RC12_RS02910	PWY-2941	L-lysine biosynthesis II
RC12_RS02910	PWY-2942	L-lysine biosynthesis III
RC12_RS02910	PWY-5097	L-lysine biosynthesis VI
RC12_RS02910	PWY-6559	spermidine biosynthesis II
RC12_RS02910	PWY-6562	norspermidine biosynthesis
RC12_RS02910	PWY-7153	grixazone biosynthesis
RC12_RS02925	PWY-6614	tetrahydrofolate biosynthesis
RC12_RS02945	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RC12_RS02945	PWY-6167	flavin biosynthesis II (archaea)
RC12_RS02945	PWY-6168	flavin biosynthesis III (fungi)
RC12_RS02985	PWY-1042	glycolysis IV (plant cytosol)
RC12_RS02985	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RC12_RS02985	PWY-5484	glycolysis II (from fructose 6-phosphate)
RC12_RS02985	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RC12_RS02985	PWY-7385	1,3-propanediol biosynthesis (engineered)
RC12_RS03140	PWY-5103	L-isoleucine biosynthesis III
RC12_RS03140	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RC12_RS03160	PWY-6825	phosphatidylcholine biosynthesis V
RC12_RS03175	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS03185	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RC12_RS03185	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RC12_RS03185	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RC12_RS03215	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RC12_RS03215	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RC12_RS03280	PWY-1281	sulfoacetaldehyde degradation I
RC12_RS03280	PWY-5482	pyruvate fermentation to acetate II
RC12_RS03280	PWY-5485	pyruvate fermentation to acetate IV
RC12_RS03280	PWY-5497	purine nucleobases degradation II (anaerobic)
RC12_RS03280	PWY-6637	sulfolactate degradation II
RC12_RS03285	PWY-5482	pyruvate fermentation to acetate II
RC12_RS03285	PWY-5485	pyruvate fermentation to acetate IV
RC12_RS03285	PWY-5497	purine nucleobases degradation II (anaerobic)
RC12_RS03300	PWY-2201	folate transformations I
RC12_RS03330	PWY-381	nitrate reduction II (assimilatory)
RC12_RS03330	PWY-5675	nitrate reduction V (assimilatory)
RC12_RS03330	PWY-6549	L-glutamine biosynthesis III
RC12_RS03330	PWY-6963	ammonia assimilation cycle I
RC12_RS03330	PWY-6964	ammonia assimilation cycle II
RC12_RS03345	PWY-6123	inosine-5'-phosphate biosynthesis I
RC12_RS03345	PWY-7234	inosine-5'-phosphate biosynthesis III
RC12_RS03370	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
RC12_RS03400	PWY-6829	tRNA methylation (yeast)
RC12_RS03400	PWY-7285	methylwyosine biosynthesis
RC12_RS03400	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RC12_RS03410	PWY-5691	urate degradation to allantoin I
RC12_RS03410	PWY-7394	urate degradation to allantoin II
RC12_RS03415	PWY-6164	3-dehydroquinate biosynthesis I
RC12_RS03430	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RC12_RS03535	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RC12_RS03535	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RC12_RS03550	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RC12_RS03550	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RC12_RS03580	PWY-5686	UMP biosynthesis
RC12_RS03590	PWY-2941	L-lysine biosynthesis II
RC12_RS03590	PWY-2942	L-lysine biosynthesis III
RC12_RS03590	PWY-5097	L-lysine biosynthesis VI
RC12_RS03625	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RC12_RS03690	PWY-6936	seleno-amino acid biosynthesis
RC12_RS03690	PWY-7274	D-cycloserine biosynthesis
RC12_RS03695	PWY-40	putrescine biosynthesis I
RC12_RS03695	PWY-43	putrescine biosynthesis II
RC12_RS03695	PWY-6305	putrescine biosynthesis IV
RC12_RS03695	PWY-6834	spermidine biosynthesis III
RC12_RS03705	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RC12_RS03705	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RC12_RS03705	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RC12_RS03705	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RC12_RS03705	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RC12_RS03705	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RC12_RS03825	PWY-2201	folate transformations I
RC12_RS03825	PWY-5497	purine nucleobases degradation II (anaerobic)
RC12_RS03860	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RC12_RS03860	PWY-5667	CDP-diacylglycerol biosynthesis I
RC12_RS03860	PWY-6453	stigma estolide biosynthesis
RC12_RS03860	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RC12_RS03860	PWY-7587	oleate biosynthesis III (cyanobacteria)
RC12_RS03930	PWY-5747	2-methylcitrate cycle II
RC12_RS03955	PWY-5484	glycolysis II (from fructose 6-phosphate)
RC12_RS03980	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RC12_RS03990	PWY-5669	phosphatidylethanolamine biosynthesis I
RC12_RS04020	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RC12_RS04030	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RC12_RS04030	PWY-2201	folate transformations I
RC12_RS04030	PWY-3841	folate transformations II
RC12_RS04030	PWY-5030	L-histidine degradation III
RC12_RS04030	PWY-5497	purine nucleobases degradation II (anaerobic)
RC12_RS04030	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RC12_RS04040	PWY-6823	molybdenum cofactor biosynthesis
RC12_RS04045	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RC12_RS04045	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RC12_RS04060	PWY-5958	acridone alkaloid biosynthesis
RC12_RS04060	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RC12_RS04060	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RC12_RS04195	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RC12_RS04240	PWY-6004	glycine betaine biosynthesis V (from glycine)
RC12_RS04245	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RC12_RS04280	PWY-6936	seleno-amino acid biosynthesis
RC12_RS04355	PWY-6605	adenine and adenosine salvage II
RC12_RS04355	PWY-6610	adenine and adenosine salvage IV
RC12_RS04375	PWY-4983	L-citrulline-nitric oxide cycle
RC12_RS04375	PWY-4984	urea cycle
RC12_RS04375	PWY-5	canavanine biosynthesis
RC12_RS04375	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RC12_RS04375	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RC12_RS04380	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RC12_RS04380	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RC12_RS04535	PWY-43	putrescine biosynthesis II
RC12_RS04550	PWY-6123	inosine-5'-phosphate biosynthesis I
RC12_RS04550	PWY-6124	inosine-5'-phosphate biosynthesis II
RC12_RS04550	PWY-7234	inosine-5'-phosphate biosynthesis III
RC12_RS04560	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RC12_RS04560	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RC12_RS04560	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RC12_RS04740	PWY-4981	L-proline biosynthesis II (from arginine)
RC12_RS04740	PWY-4984	urea cycle
RC12_RS04740	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RC12_RS04745	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RC12_RS04745	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RC12_RS04750	PWY-6168	flavin biosynthesis III (fungi)
RC12_RS04750	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RC12_RS04810	PWY-6164	3-dehydroquinate biosynthesis I
RC12_RS04820	PWY-6700	queuosine biosynthesis
RC12_RS04890	PWY-2941	L-lysine biosynthesis II
RC12_RS04890	PWY-2942	L-lysine biosynthesis III
RC12_RS04890	PWY-5097	L-lysine biosynthesis VI
RC12_RS04890	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RC12_RS04890	PWY-6559	spermidine biosynthesis II
RC12_RS04890	PWY-6562	norspermidine biosynthesis
RC12_RS04890	PWY-7153	grixazone biosynthesis
RC12_RS04890	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RC12_RS04970	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RC12_RS04970	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RC12_RS04970	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RC12_RS04970	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RC12_RS04990	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RC12_RS04990	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RC12_RS04990	PWY-6897	thiamin salvage II
RC12_RS04990	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RC12_RS04990	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RC12_RS04990	PWY-7356	thiamin salvage IV (yeast)
RC12_RS04990	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RC12_RS04995	PWY-6892	thiazole biosynthesis I (E. coli)
RC12_RS04995	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RC12_RS05000	PWY-6891	thiazole biosynthesis II (Bacillus)
RC12_RS05000	PWY-6892	thiazole biosynthesis I (E. coli)
RC12_RS05045	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RC12_RS05045	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RC12_RS05060	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RC12_RS05060	PWY-6596	adenosine nucleotides degradation I
RC12_RS05060	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS05065	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RC12_RS05100	PWY-5269	cardiolipin biosynthesis II
RC12_RS05100	PWY-5668	cardiolipin biosynthesis I
RC12_RS05145	PWY-3341	L-proline biosynthesis III
RC12_RS05145	PWY-4981	L-proline biosynthesis II (from arginine)
RC12_RS05145	PWY-6344	L-ornithine degradation II (Stickland reaction)
RC12_RS05165	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RC12_RS05165	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RC12_RS05170	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RC12_RS05170	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RC12_RS05170	PWY-6897	thiamin salvage II
RC12_RS05170	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RC12_RS05170	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RC12_RS05170	PWY-7356	thiamin salvage IV (yeast)
RC12_RS05170	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RC12_RS05175	PWY-6910	hydroxymethylpyrimidine salvage
RC12_RS05175	PWY-7356	thiamin salvage IV (yeast)
RC12_RS05175	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RC12_RS05205	PWY-2161	folate polyglutamylation
RC12_RS05245	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RC12_RS05245	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RC12_RS05255	PWY-5686	UMP biosynthesis
RC12_RS05285	PWY-7560	methylerythritol phosphate pathway II
RC12_RS05335	PWY-5669	phosphatidylethanolamine biosynthesis I
RC12_RS05415	PWY-3821	galactose degradation III
RC12_RS05415	PWY-6317	galactose degradation I (Leloir pathway)
RC12_RS05415	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RC12_RS05415	PWY-6527	stachyose degradation
RC12_RS05415	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RC12_RS05415	PWY-7344	UDP-D-galactose biosynthesis
RC12_RS05440	PWY-3221	dTDP-L-rhamnose biosynthesis II
RC12_RS05440	PWY-6808	dTDP-D-forosamine biosynthesis
RC12_RS05440	PWY-6942	dTDP-D-desosamine biosynthesis
RC12_RS05440	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RC12_RS05440	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RC12_RS05440	PWY-6974	dTDP-L-olivose biosynthesis
RC12_RS05440	PWY-6976	dTDP-L-mycarose biosynthesis
RC12_RS05440	PWY-7104	dTDP-L-megosamine biosynthesis
RC12_RS05440	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RC12_RS05440	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RC12_RS05440	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RC12_RS05440	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RC12_RS05440	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RC12_RS05440	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RC12_RS05440	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RC12_RS05440	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RC12_RS05440	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
RC12_RS05440	PWY-7688	RC12_RS05440
RC12_RS05445	PWY-3221	dTDP-L-rhamnose biosynthesis II
RC12_RS05445	PWY-6808	dTDP-D-forosamine biosynthesis
RC12_RS05445	PWY-6942	dTDP-D-desosamine biosynthesis
RC12_RS05445	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RC12_RS05445	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
RC12_RS05445	PWY-6974	dTDP-L-olivose biosynthesis
RC12_RS05445	PWY-6976	dTDP-L-mycarose biosynthesis
RC12_RS05445	PWY-7104	dTDP-L-megosamine biosynthesis
RC12_RS05445	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
RC12_RS05445	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
RC12_RS05445	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
RC12_RS05445	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
RC12_RS05445	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
RC12_RS05445	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
RC12_RS05445	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
RC12_RS05445	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
RC12_RS05445	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
RC12_RS05445	PWY-7688	RC12_RS05445
RC12_RS05450	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RC12_RS05450	PWY-7688	RC12_RS05450
RC12_RS05455	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
RC12_RS05455	PWY-7688	RC12_RS05455
RC12_RS05525	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
RC12_RS05560	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS05650	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS05745	PWY-5667	CDP-diacylglycerol biosynthesis I
RC12_RS05745	PWY-5981	CDP-diacylglycerol biosynthesis III
RC12_RS05755	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RC12_RS05755	PWY-6153	autoinducer AI-2 biosynthesis I
RC12_RS05755	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
RC12_RS05770	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RC12_RS05770	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RC12_RS05770	PWY-6936	seleno-amino acid biosynthesis
RC12_RS05770	PWY-702	L-methionine biosynthesis II
RC12_RS05775	PWY-2201	folate transformations I
RC12_RS05775	PWY-3841	folate transformations II
RC12_RS05855	PWY-6167	flavin biosynthesis II (archaea)
RC12_RS05855	PWY-6168	flavin biosynthesis III (fungi)
RC12_RS05855	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS05965	PWY-7294	xylose degradation IV
RC12_RS05965	PWY-7295	L-arabinose degradation IV
RC12_RS05985	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RC12_RS05985	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RC12_RS06010	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS06020	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RC12_RS06020	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RC12_RS06020	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RC12_RS06120	PWY-723	alkylnitronates degradation
RC12_RS06200	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
RC12_RS06200	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
RC12_RS06205	PWY-7183	pyrimidine nucleobases salvage I
RC12_RS06215	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RC12_RS06235	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RC12_RS06240	PWY-1042	glycolysis IV (plant cytosol)
RC12_RS06240	PWY-1622	formaldehyde assimilation I (serine pathway)
RC12_RS06240	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RC12_RS06240	PWY-5484	glycolysis II (from fructose 6-phosphate)
RC12_RS06240	PWY-5723	Rubisco shunt
RC12_RS06240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RC12_RS06240	PWY-6143	CMP-pseudaminate biosynthesis
RC12_RS06240	PWY-6886	1-butanol autotrophic biosynthesis
RC12_RS06240	PWY-6901	superpathway of glucose and xylose degradation
RC12_RS06240	PWY-7003	glycerol degradation to butanol
RC12_RS06240	PWY-7124	ethylene biosynthesis V (engineered)
RC12_RS06240	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RC12_RS06240	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
RC12_RS06240	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
RC12_RS06240	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
RC12_RS06240	PWY-7719	RC12_RS06240
RC12_RS06280	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RC12_RS06280	PWY-6143	CMP-pseudaminate biosynthesis
RC12_RS06315	PWY-6143	CMP-pseudaminate biosynthesis
RC12_RS06360	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RC12_RS06360	PWY-5368	dimorphecolate biosynthesis
RC12_RS06360	PWY-5995	linoleate biosynthesis I (plants)
RC12_RS06360	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RC12_RS06360	PWY-6803	phosphatidylcholine acyl editing
RC12_RS06360	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RC12_RS06360	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RC12_RS06360	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RC12_RS06360	PWY-7470	phosphatidylcholine biosynthesis VII
RC12_RS06360	PWY-7618	ricinoleate biosynthesis
RC12_RS06370	PWY-7294	xylose degradation IV
RC12_RS06370	PWY-7295	L-arabinose degradation IV
RC12_RS06370	PWY-7560	methylerythritol phosphate pathway II
RC12_RS06375	PWY-5667	CDP-diacylglycerol biosynthesis I
RC12_RS06375	PWY-5981	CDP-diacylglycerol biosynthesis III
RC12_RS06390	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RC12_RS06390	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
RC12_RS06395	PWY-6803	phosphatidylcholine acyl editing
RC12_RS06395	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RC12_RS06395	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RC12_RS06395	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
RC12_RS06430	PWY-5674	nitrate reduction IV (dissimilatory)
RC12_RS06475	PWY-5392	reductive TCA cycle II
RC12_RS06475	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RC12_RS06475	PWY-5690	TCA cycle II (plants and fungi)
RC12_RS06475	PWY-5913	TCA cycle VI (obligate autotrophs)
RC12_RS06475	PWY-6728	methylaspartate cycle
RC12_RS06475	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RC12_RS06475	PWY-7254	TCA cycle VII (acetate-producers)
RC12_RS06475	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RC12_RS06480	PWY-6749	CMP-legionaminate biosynthesis I
RC12_RS06490	PWY-5198	factor 420 biosynthesis
RC12_RS06490	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
RC12_RS06490	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
RC12_RS06520	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
RC12_RS06600	PWY-6123	inosine-5'-phosphate biosynthesis I
RC12_RS06600	PWY-6124	inosine-5'-phosphate biosynthesis II
RC12_RS06600	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS06600	PWY-7234	inosine-5'-phosphate biosynthesis III
RC12_RS06625	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RC12_RS06625	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RC12_RS06625	PWY-5989	stearate biosynthesis II (bacteria and plants)
RC12_RS06625	PWY-6113	superpathway of mycolate biosynthesis
RC12_RS06625	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RC12_RS06625	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RC12_RS06625	PWY-7663	gondoate biosynthesis (anaerobic)
RC12_RS06625	PWY-7664	oleate biosynthesis IV (anaerobic)
RC12_RS06625	PWYG-321	mycolate biosynthesis
RC12_RS06630	PWY-1042	glycolysis IV (plant cytosol)
RC12_RS06630	PWY-5484	glycolysis II (from fructose 6-phosphate)
RC12_RS06630	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RC12_RS06630	PWY-7003	glycerol degradation to butanol
RC12_RS06635	PWY-1042	glycolysis IV (plant cytosol)
RC12_RS06635	PWY-5484	glycolysis II (from fructose 6-phosphate)
RC12_RS06635	PWY-6886	1-butanol autotrophic biosynthesis
RC12_RS06635	PWY-6901	superpathway of glucose and xylose degradation
RC12_RS06635	PWY-7003	glycerol degradation to butanol
RC12_RS06640	PWY-1042	glycolysis IV (plant cytosol)
RC12_RS06640	PWY-5484	glycolysis II (from fructose 6-phosphate)
RC12_RS06640	PWY-6901	superpathway of glucose and xylose degradation
RC12_RS06640	PWY-7003	glycerol degradation to butanol
RC12_RS06645	PWY-5381	pyridine nucleotide cycling (plants)
RC12_RS06645	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RC12_RS06660	PWY-6749	CMP-legionaminate biosynthesis I
RC12_RS06670	PWY-6012	acyl carrier protein metabolism I
RC12_RS06670	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RC12_RS06815	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
RC12_RS06820	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
RC12_RS06835	PWY-5481	pyruvate fermentation to lactate
RC12_RS06835	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
RC12_RS06835	PWY-6901	superpathway of glucose and xylose degradation
RC12_RS06940	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RC12_RS06940	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RC12_RS06940	PWY-6896	thiamin salvage I
RC12_RS06940	PWY-6897	thiamin salvage II
RC12_RS06955	PWY-6825	phosphatidylcholine biosynthesis V
RC12_RS07090	PWY-3781	aerobic respiration I (cytochrome c)
RC12_RS07090	PWY-4521	arsenite oxidation I (respiratory)
RC12_RS07090	PWY-6692	Fe(II) oxidation
RC12_RS07090	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RC12_RS07095	PWY-3781	aerobic respiration I (cytochrome c)
RC12_RS07095	PWY-4521	arsenite oxidation I (respiratory)
RC12_RS07095	PWY-6692	Fe(II) oxidation
RC12_RS07095	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RC12_RS07115	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RC12_RS07115	PWY-5686	UMP biosynthesis
RC12_RS07115	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RC12_RS07135	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS07160	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RC12_RS07160	PWY-6853	ethylene biosynthesis II (microbes)
RC12_RS07160	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RC12_RS07165	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RC12_RS07220	PWY-6562	norspermidine biosynthesis
RC12_RS07235	PWY-6823	molybdenum cofactor biosynthesis
RC12_RS07240	PWY-6823	molybdenum cofactor biosynthesis
RC12_RS07265	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RC12_RS07265	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RC12_RS07265	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RC12_RS07275	PWY-2941	L-lysine biosynthesis II
RC12_RS07275	PWY-5097	L-lysine biosynthesis VI
RC12_RS07295	PWY-3801	sucrose degradation II (sucrose synthase)
RC12_RS07295	PWY-5054	sorbitol biosynthesis I
RC12_RS07295	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RC12_RS07295	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RC12_RS07295	PWY-5659	GDP-mannose biosynthesis
RC12_RS07295	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RC12_RS07295	PWY-621	sucrose degradation III (sucrose invertase)
RC12_RS07295	PWY-622	starch biosynthesis
RC12_RS07295	PWY-6981	chitin biosynthesis
RC12_RS07295	PWY-6992	1,5-anhydrofructose degradation
RC12_RS07295	PWY-7238	sucrose biosynthesis II
RC12_RS07295	PWY-7347	sucrose biosynthesis III
RC12_RS07295	PWY-7385	1,3-propanediol biosynthesis (engineered)
RC12_RS07300	PWY-3801	sucrose degradation II (sucrose synthase)
RC12_RS07300	PWY-6527	stachyose degradation
RC12_RS07300	PWY-7238	sucrose biosynthesis II
RC12_RS07300	PWY-7343	UDP-glucose biosynthesis
RC12_RS07690	PWY-7560	methylerythritol phosphate pathway II
RC12_RS07700	PWY-5278	sulfite oxidation III
RC12_RS07700	PWY-5340	sulfate activation for sulfonation
RC12_RS07700	PWY-6683	sulfate reduction III (assimilatory)
RC12_RS07700	PWY-6932	selenate reduction
RC12_RS07705	PWY-5269	cardiolipin biosynthesis II
RC12_RS07705	PWY-5668	cardiolipin biosynthesis I
RC12_RS07720	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RC12_RS07720	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RC12_RS07785	PWY-5525	D-glucuronate degradation I
RC12_RS07845	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RC12_RS07900	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RC12_RS07900	PWY-5723	Rubisco shunt
RC12_RS07900	PWY-6891	thiazole biosynthesis II (Bacillus)
RC12_RS07900	PWY-6892	thiazole biosynthesis I (E. coli)
RC12_RS07900	PWY-6901	superpathway of glucose and xylose degradation
RC12_RS07900	PWY-7560	methylerythritol phosphate pathway II
RC12_RS07935	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RC12_RS07935	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RC12_RS08060	PWY-1042	glycolysis IV (plant cytosol)
RC12_RS08060	PWY-1622	formaldehyde assimilation I (serine pathway)
RC12_RS08060	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RC12_RS08060	PWY-5484	glycolysis II (from fructose 6-phosphate)
RC12_RS08060	PWY-5723	Rubisco shunt
RC12_RS08060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RC12_RS08060	PWY-6886	1-butanol autotrophic biosynthesis
RC12_RS08060	PWY-6901	superpathway of glucose and xylose degradation
RC12_RS08060	PWY-7003	glycerol degradation to butanol
RC12_RS08060	PWY-7124	ethylene biosynthesis V (engineered)
RC12_RS08060	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RC12_RS08080	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RC12_RS08080	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RC12_RS08105	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RC12_RS08280	PWY-2201	folate transformations I
RC12_RS08365	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RC12_RS08370	PWY-6871	3-methylbutanol biosynthesis
RC12_RS08420	PWY-6700	queuosine biosynthesis
RC12_RS08495	PWY-5101	L-isoleucine biosynthesis II
RC12_RS08495	PWY-5103	L-isoleucine biosynthesis III
RC12_RS08495	PWY-5104	L-isoleucine biosynthesis IV
RC12_RS08495	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RC12_RS08510	PWY-6703	preQ<sub>0</sub> biosynthesis
RC12_RS08545	PWY-6123	inosine-5'-phosphate biosynthesis I
RC12_RS08545	PWY-6124	inosine-5'-phosphate biosynthesis II
RC12_RS08545	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RC12_RS08545	PWY-7234	inosine-5'-phosphate biosynthesis III
RC12_RS08550	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RC12_RS08550	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RC12_RS08550	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RC12_RS08550	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RC12_RS08550	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RC12_RS08550	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RC12_RS08550	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RC12_RS08550	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RC12_RS08560	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RC12_RS08560	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RC12_RS08560	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RC12_RS08560	PWY-6936	seleno-amino acid biosynthesis
RC12_RS08560	PWY-702	L-methionine biosynthesis II
RC12_RS08565	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RC12_RS08565	PWY-7177	UTP and CTP dephosphorylation II
RC12_RS08565	PWY-7185	UTP and CTP dephosphorylation I
