locus-tag class description RC39_RS00030 PF07690 Major Facilitator Superfamily RC39_RS00050 PF03144 Elongation factor Tu domain 2 RC39_RS00050 PF00009 Elongation factor Tu GTP binding domain RC39_RS00050 PF00679 Elongation factor G C-terminus RC39_RS00065 PF03963 Flagellar hook capping protein - N-terminal region RC39_RS00070 PF07559 Flagellar basal body protein FlaE RC39_RS00070 PF00460 Flagella basal body rod protein RC39_RS00070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RC39_RS00100 PF03641 Possible lysine decarboxylase RC39_RS00105 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RC39_RS00105 PF04509 CheC-like family RC39_RS00110 PF02154 Flagellar motor switch protein FliM RC39_RS00110 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RC39_RS00115 PF04539 Sigma-70 region 3 RC39_RS00115 PF04545 Sigma-70, region 4 RC39_RS00115 PF04542 Sigma-70 region 2 RC39_RS00125 PF10609 NUBPL iron-transfer P-loop NTPase RC39_RS00130 PF00448 SRP54-type protein, GTPase domain RC39_RS00135 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RC39_RS00140 PF01220 Dehydroquinase class II RC39_RS00145 PF01979 Amidohydrolase family RC39_RS00150 PF01343 Peptidase family S49 RC39_RS00175 PF02589 LUD domain RC39_RS00175 PF13183 4Fe-4S dicluster domain RC39_RS00175 PF11870 Domain of unknown function (DUF3390) RC39_RS00180 PF02754 Cysteine-rich domain RC39_RS00185 PF02652 L-lactate permease RC39_RS00200 PF03498 Cytolethal distending toxin A/C domain RC39_RS00210 PF01654 Cytochrome bd terminal oxidase subunit I RC39_RS00215 PF02322 Cytochrome bd terminal oxidase subunit II RC39_RS00235 PF01177 Asp/Glu/Hydantoin racemase RC39_RS00240 PF03167 Uracil DNA glycosylase superfamily RC39_RS00245 PF10415 Fumarase C C-terminus RC39_RS00245 PF00206 Lyase RC39_RS00250 PF03605 Anaerobic c4-dicarboxylate membrane transporter RC39_RS00280 PF00829 Ribosomal prokaryotic L21 protein RC39_RS00285 PF01016 Ribosomal L27 protein RC39_RS00290 PF01018 GTP1/OBG RC39_RS00290 PF01926 50S ribosome-binding GTPase RC39_RS00295 PF00696 Amino acid kinase family RC39_RS00300 PF00551 Formyl transferase RC39_RS00300 PF02911 Formyl transferase, C-terminal domain RC39_RS00305 PF08279 HTH domain RC39_RS00305 PF03099 Biotin/lipoate A/B protein ligase family RC39_RS00305 PF02237 Biotin protein ligase C terminal domain RC39_RS00310 PF13614 AAA domain RC39_RS00315 PF17762 HTH domain found in ParB protein RC39_RS00315 PF02195 ParB-like nuclease domain RC39_RS00325 PF00430 ATP synthase B/B' CF(0) RC39_RS00330 PF00213 ATP synthase delta (OSCP) subunit RC39_RS00335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RC39_RS00335 PF02874 ATP synthase alpha/beta family, beta-barrel domain RC39_RS00335 PF00306 ATP synthase alpha/beta chain, C terminal domain RC39_RS00340 PF00231 ATP synthase RC39_RS00345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RC39_RS00345 PF02874 ATP synthase alpha/beta family, beta-barrel domain RC39_RS00350 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RC39_RS00355 PF01618 MotA/TolQ/ExbB proton channel family RC39_RS00360 PF02472 Biopolymer transport protein ExbD/TolR RC39_RS00375 PF00223 Photosystem I psaA/psaB protein RC39_RS00375 PF00691 OmpA family RC39_RS00385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RC39_RS00390 PF00698 Acyl transferase domain RC39_RS00395 PF01048 Phosphorylase superfamily RC39_RS00400 PF01171 PP-loop family RC39_RS00415 PF02130 Uncharacterized protein family UPF0054 RC39_RS00420 PF01207 Dihydrouridine synthase (Dus) RC39_RS00430 PF01258 Prokaryotic dksA/traR C4-type zinc finger RC39_RS00435 PF02590 Predicted SPOUT methyltransferase RC39_RS00440 PF17848 Acetyl-coA carboxylase zinc finger domain RC39_RS00440 PF01039 Carboxyl transferase domain RC39_RS00445 PF00459 Inositol monophosphatase family RC39_RS00450 PF01103 Surface antigen RC39_RS00450 PF07244 Surface antigen variable number repeat RC39_RS00465 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase RC39_RS00475 PF00288 GHMP kinases N terminal domain RC39_RS00485 PF04760 Translation initiation factor IF-2, N-terminal region RC39_RS00485 PF11987 Translation-initiation factor 2 RC39_RS00485 PF00009 Elongation factor Tu GTP binding domain RC39_RS00490 PF02033 Ribosome-binding factor A RC39_RS00495 PF17384 RimP C-terminal SH3 domain RC39_RS00495 PF02576 RimP N-terminal domain RC39_RS00510 PF00950 ABC 3 transport family RC39_RS00515 PF00005 ABC transporter RC39_RS00535 PF05199 GMC oxidoreductase RC39_RS00535 PF00732 GMC oxidoreductase RC39_RS00545 PF07992 Pyridine nucleotide-disulphide oxidoreductase RC39_RS00550 PF00085 Thioredoxin RC39_RS00555 PF02021 Uncharacterised protein family UPF0102 RC39_RS00560 PF00742 Homoserine dehydrogenase RC39_RS00560 PF03447 Homoserine dehydrogenase, NAD binding domain RC39_RS00560 PF01842 ACT domain RC39_RS00565 PF00155 Aminotransferase class I and II RC39_RS00580 PF08032 RNA 2'-O ribose methyltransferase substrate binding RC39_RS00580 PF00588 SpoU rRNA Methylase family RC39_RS00585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RC39_RS00590 PF01197 Ribosomal protein L31 RC39_RS00595 PF04452 RNA methyltransferase RC39_RS00620 PF04055 Radical SAM superfamily RC39_RS00620 PF06463 Molybdenum Cofactor Synthesis C RC39_RS00645 PF02659 Putative manganese efflux pump RC39_RS00660 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RC39_RS00660 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RC39_RS00665 PF16653 Saccharopine dehydrogenase C-terminal domain RC39_RS00665 PF03435 Saccharopine dehydrogenase NADP binding domain RC39_RS00670 PF08402 TOBE domain RC39_RS00670 PF00005 ABC transporter RC39_RS00680 PF13416 Bacterial extracellular solute-binding protein RC39_RS00690 PF05992 SbmA/BacA-like family RC39_RS00695 PF03471 Transporter associated domain RC39_RS00695 PF01595 Cyclin M transmembrane N-terminal domain RC39_RS00695 PF00571 CBS domain RC39_RS00705 PF08274 PhnA Zinc-Ribbon RC39_RS00705 PF03831 PhnA domain RC39_RS00710 PF03741 Integral membrane protein TerC family RC39_RS00715 PF00551 Formyl transferase RC39_RS00720 PF01256 Carbohydrate kinase RC39_RS00720 PF03853 YjeF-related protein N-terminus RC39_RS00730 PF01078 Magnesium chelatase, subunit ChlI RC39_RS00730 PF13335 Magnesium chelatase, subunit ChlI C-terminal RC39_RS00735 PF01327 Polypeptide deformylase RC39_RS00740 PF00574 Clp protease RC39_RS00745 PF05698 Bacterial trigger factor protein (TF) C-terminus RC39_RS00745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RC39_RS00745 PF05697 Bacterial trigger factor protein (TF) RC39_RS00750 PF01227 GTP cyclohydrolase I RC39_RS00755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RC39_RS00755 PF18269 T3SS EscN ATPase C-terminal domain RC39_RS00760 PF00156 Phosphoribosyl transferase domain RC39_RS00765 PF01113 Dihydrodipicolinate reductase, N-terminus RC39_RS00765 PF05173 Dihydrodipicolinate reductase, C-terminus RC39_RS00770 PF12002 MgsA AAA+ ATPase C terminal RC39_RS00770 PF16193 AAA C-terminal domain RC39_RS00770 PF05496 Holliday junction DNA helicase RuvB P-loop domain RC39_RS00770 PF01661 Macro domain RC39_RS00785 PF03600 Citrate transporter RC39_RS00790 PF03169 OPT oligopeptide transporter protein RC39_RS00795 PF02673 Bacitracin resistance protein BacA RC39_RS00800 PF03129 Anticodon binding domain RC39_RS00800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RC39_RS00800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RC39_RS00805 PF05198 Translation initiation factor IF-3, N-terminal domain RC39_RS00805 PF00707 Translation initiation factor IF-3, C-terminal domain RC39_RS00830 PF01118 Semialdehyde dehydrogenase, NAD binding domain RC39_RS00830 PF02774 Semialdehyde dehydrogenase, dimerisation domain RC39_RS00840 PF00696 Amino acid kinase family RC39_RS00845 PF00202 Aminotransferase class-III RC39_RS00855 PF00132 Bacterial transferase hexapeptide (six repeats) RC39_RS00860 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RC39_RS00860 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RC39_RS00865 PF00268 Ribonucleotide reductase, small chain RC39_RS00875 PF00156 Phosphoribosyl transferase domain RC39_RS00880 PF01765 Ribosome recycling factor RC39_RS00885 PF03840 Preprotein translocase SecG subunit RC39_RS00890 PF01027 Inhibitor of apoptosis-promoting Bax1 RC39_RS00895 PF00484 Carbonic anhydrase RC39_RS00900 PF00924 Mechanosensitive ion channel RC39_RS00905 PF01106 NifU-like domain RC39_RS00905 PF04324 BFD-like [2Fe-2S] binding domain RC39_RS00905 PF01592 NifU-like N terminal domain RC39_RS00910 PF00266 Aminotransferase class-V RC39_RS00915 PF01814 Hemerythrin HHE cation binding domain RC39_RS00925 PF01632 Ribosomal protein L35 RC39_RS00930 PF00453 Ribosomal protein L20 RC39_RS00935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RC39_RS00935 PF00672 HAMP domain RC39_RS00965 PF01967 MoaC family RC39_RS00970 PF04359 Protein of unknown function (DUF493) RC39_RS00980 PF03372 Endonuclease/Exonuclease/phosphatase family RC39_RS00985 PF08019 Phosphoethanolamine transferase EptA/EptB RC39_RS00985 PF00884 Sulfatase RC39_RS00990 PF01219 Prokaryotic diacylglycerol kinase RC39_RS01000 PF04909 Amidohydrolase RC39_RS01010 PF05958 tRNA (Uracil-5-)-methyltransferase RC39_RS01060 PF06114 IrrE N-terminal-like domain RC39_RS01080 PF02535 ZIP Zinc transporter RC39_RS01110 PF01145 SPFH domain / Band 7 family RC39_RS01115 PF01063 Amino-transferase class IV RC39_RS01120 PF01361 Tautomerase enzyme RC39_RS01125 PF00578 AhpC/TSA family RC39_RS01130 PF02677 Epoxyqueuosine reductase QueH RC39_RS01135 PF07977 FabA-like domain RC39_RS01140 PF00132 Bacterial transferase hexapeptide (six repeats) RC39_RS01140 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 RC39_RS01145 PF06689 ClpX C4-type zinc finger RC39_RS01145 PF07724 AAA domain (Cdc48 subfamily) RC39_RS01145 PF10431 C-terminal, D2-small domain, of ClpB protein RC39_RS01160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RC39_RS01160 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RC39_RS01160 PF02142 MGS-like domain RC39_RS01170 PF00923 Transaldolase/Fructose-6-phosphate aldolase RC39_RS01180 PF01584 CheW-like domain RC39_RS01185 PF00072 Response regulator receiver domain RC39_RS01185 PF02895 Signal transducing histidine kinase, homodimeric domain RC39_RS01185 PF01584 CheW-like domain RC39_RS01185 PF01627 Hpt domain RC39_RS01185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RC39_RS01190 PF01584 CheW-like domain RC39_RS01190 PF00072 Response regulator receiver domain RC39_RS01200 PF03449 Transcription elongation factor, N-terminal RC39_RS01200 PF01272 Transcription elongation factor, GreA/GreB, C-term RC39_RS01205 PF02684 Lipid-A-disaccharide synthetase RC39_RS01215 PF07690 Major Facilitator Superfamily RC39_RS01220 PF01975 Survival protein SurE RC39_RS01230 PF00905 Penicillin binding protein transpeptidase domain RC39_RS01235 PF12857 TOBE-like domain RC39_RS01235 PF00005 ABC transporter RC39_RS01235 PF17850 CysA C-terminal regulatory domain RC39_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS01260 PF04301 Protein of unknown function (DUF452) RC39_RS01265 PF00155 Aminotransferase class I and II RC39_RS01270 PF00202 Aminotransferase class-III RC39_RS01280 PF00893 Small Multidrug Resistance protein RC39_RS01290 PF01386 Ribosomal L25p family RC39_RS01290 PF14693 Ribosomal protein TL5, C-terminal domain RC39_RS01295 PF01195 Peptidyl-tRNA hydrolase RC39_RS01305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RC39_RS01305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RC39_RS01315 PF00800 Prephenate dehydratase RC39_RS01315 PF01842 ACT domain RC39_RS01315 PF01817 Chorismate mutase type II RC39_RS01320 PF00155 Aminotransferase class I and II RC39_RS01325 PF08345 Flagellar M-ring protein C-terminal RC39_RS01325 PF01514 Secretory protein of YscJ/FliF family RC39_RS01330 PF01706 FliG C-terminal domain RC39_RS01330 PF14841 FliG middle domain RC39_RS01330 PF14842 FliG N-terminal domain RC39_RS01340 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RC39_RS01340 PF02780 Transketolase, C-terminal domain RC39_RS01340 PF02779 Transketolase, pyrimidine binding domain RC39_RS01355 PF01209 ubiE/COQ5 methyltransferase family RC39_RS01360 PF02601 Exonuclease VII, large subunit RC39_RS01360 PF13742 OB-fold nucleic acid binding domain RC39_RS01365 PF00266 Aminotransferase class-V RC39_RS01370 PF01042 Endoribonuclease L-PSP RC39_RS01375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RC39_RS01375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RC39_RS01380 PF02504 Fatty acid synthesis protein RC39_RS01385 PF01783 Ribosomal L32p protein family RC39_RS01395 PF00334 Nucleoside diphosphate kinase RC39_RS01400 PF00037 4Fe-4S binding domain RC39_RS01405 PF00578 AhpC/TSA family RC39_RS01405 PF10417 C-terminal domain of 1-Cys peroxiredoxin RC39_RS01410 PF01312 FlhB HrpN YscU SpaS Family RC39_RS01415 PF00691 OmpA family RC39_RS01415 PF13677 Membrane MotB of proton-channel complex MotA/MotB RC39_RS01420 PF01618 MotA/TolQ/ExbB proton channel family RC39_RS01425 PF01612 3'-5' exonuclease RC39_RS01425 PF00476 DNA polymerase family A RC39_RS01425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RC39_RS01425 PF01367 5'-3' exonuclease, C-terminal SAM fold RC39_RS01430 PF00083 Sugar (and other) transporter RC39_RS01430 PF07690 Major Facilitator Superfamily RC39_RS01435 PF01156 Inosine-uridine preferring nucleoside hydrolase RC39_RS01445 PF17755 UvrA DNA-binding domain RC39_RS01445 PF00005 ABC transporter RC39_RS01445 PF17760 UvrA interaction domain RC39_RS01450 PF01925 Sulfite exporter TauE/SafE RC39_RS01460 PF04715 Anthranilate synthase component I, N terminal region RC39_RS01460 PF00425 chorismate binding enzyme RC39_RS01465 PF00117 Glutamine amidotransferase class-I RC39_RS01465 PF02885 Glycosyl transferase family, helical bundle domain RC39_RS01465 PF00591 Glycosyl transferase family, a/b domain RC39_RS01470 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RC39_RS01475 PF00291 Pyridoxal-phosphate dependent enzyme RC39_RS01480 PF00290 Tryptophan synthase alpha chain RC39_RS01490 PF04509 CheC-like family RC39_RS01490 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RC39_RS01505 PF00037 4Fe-4S binding domain RC39_RS01510 PF00072 Response regulator receiver domain RC39_RS01510 PF00486 Transcriptional regulatory protein, C terminal RC39_RS01520 PF02660 Glycerol-3-phosphate acyltransferase RC39_RS01525 PF00034 Cytochrome c RC39_RS01525 PF03150 Di-haem cytochrome c peroxidase RC39_RS01530 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RC39_RS01530 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RC39_RS01530 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RC39_RS01530 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RC39_RS01535 PF01252 Signal peptidase (SPase) II RC39_RS01540 PF03653 Uncharacterised protein family (UPF0093) RC39_RS01545 PF04055 Radical SAM superfamily RC39_RS01545 PF06969 HemN C-terminal domain RC39_RS01555 PF02321 Outer membrane efflux protein RC39_RS01560 PF00873 AcrB/AcrD/AcrF family RC39_RS01565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RC39_RS01565 PF00529 HlyD membrane-fusion protein of T1SS RC39_RS01580 PF01165 Ribosomal protein S21 RC39_RS01590 PF03738 Glutathionylspermidine synthase preATP-grasp RC39_RS01595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RC39_RS01595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RC39_RS01600 PF04461 Protein of unknown function (DUF520) RC39_RS01615 PF06480 FtsH Extracellular RC39_RS01615 PF17862 AAA+ lid domain RC39_RS01615 PF01434 Peptidase family M41 RC39_RS01615 PF00004 ATPase family associated with various cellular activities (AAA) RC39_RS01620 PF01794 Ferric reductase like transmembrane component RC39_RS01625 PF00174 Oxidoreductase molybdopterin binding domain RC39_RS01630 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RC39_RS01635 PF01029 NusB family RC39_RS01640 PF00885 6,7-dimethyl-8-ribityllumazine synthase RC39_RS01645 PF00793 DAHP synthetase I family RC39_RS01655 PF01926 50S ribosome-binding GTPase RC39_RS01655 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RC39_RS01660 PF01202 Shikimate kinase RC39_RS01665 PF00579 tRNA synthetases class I (W and Y) RC39_RS01670 PF02403 Seryl-tRNA synthetase N-terminal domain RC39_RS01670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RC39_RS01685 PF02887 Pyruvate kinase, alpha/beta domain RC39_RS01685 PF00391 PEP-utilising enzyme, mobile domain RC39_RS01685 PF00224 Pyruvate kinase, barrel domain RC39_RS01690 PF06039 Malate:quinone oxidoreductase (Mqo) RC39_RS01695 PF03309 Type III pantothenate kinase RC39_RS01705 PF15437 Plasminogen-binding protein pgbA C-terminal RC39_RS01715 PF02686 Glu-tRNAGln amidotransferase C subunit RC39_RS01725 PF01475 Ferric uptake regulator family RC39_RS01730 PF00152 tRNA synthetases class II (D, K and N) RC39_RS01730 PF01336 OB-fold nucleic acid binding domain RC39_RS01735 PF00464 Serine hydroxymethyltransferase RC39_RS01750 PF08501 Shikimate dehydrogenase substrate binding domain RC39_RS01760 PF01790 Prolipoprotein diacylglyceryl transferase RC39_RS01765 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RC39_RS01770 PF02910 Fumarate reductase flavoprotein C-term RC39_RS01770 PF00890 FAD binding domain RC39_RS01775 PF13085 2Fe-2S iron-sulfur cluster binding domain RC39_RS01775 PF13183 4Fe-4S dicluster domain RC39_RS01780 PF10396 GTP-binding protein TrmE N-terminus RC39_RS01780 PF12631 MnmE helical domain RC39_RS01780 PF01926 50S ribosome-binding GTPase RC39_RS01800 PF05199 GMC oxidoreductase RC39_RS01800 PF00732 GMC oxidoreductase RC39_RS01850 PF12848 ABC transporter RC39_RS01850 PF00005 ABC transporter RC39_RS01865 PF09186 Domain of unknown function (DUF1949) RC39_RS01865 PF01205 Uncharacterized protein family UPF0029 RC39_RS01885 PF08245 Mur ligase middle domain RC39_RS01890 PF00953 Glycosyl transferase family 4 RC39_RS01895 PF01676 Metalloenzyme superfamily RC39_RS01895 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RC39_RS01915 PF02910 Fumarate reductase flavoprotein C-term RC39_RS01915 PF00890 FAD binding domain RC39_RS01920 PF13183 4Fe-4S dicluster domain RC39_RS01920 PF13085 2Fe-2S iron-sulfur cluster binding domain RC39_RS01925 PF02754 Cysteine-rich domain RC39_RS01930 PF03070 TENA/THI-4/PQQC family RC39_RS01935 PF00550 Phosphopantetheine attachment site RC39_RS01940 PF02801 Beta-ketoacyl synthase, C-terminal domain RC39_RS01940 PF00109 Beta-ketoacyl synthase, N-terminal domain RC39_RS01945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RC39_RS01950 PF07715 TonB-dependent Receptor Plug Domain RC39_RS01950 PF00593 TonB dependent receptor RC39_RS01955 PF00293 NUDIX domain RC39_RS01960 PF00672 HAMP domain RC39_RS01960 PF17200 Single Cache domain 2 RC39_RS01960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RC39_RS01970 PF00830 Ribosomal L28 family RC39_RS01975 PF00834 Ribulose-phosphate 3 epimerase family RC39_RS01980 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RC39_RS01980 PF14480 DNA polymerase III polC-type N-terminus I RC39_RS01980 PF11490 DNA polymerase III polC-type N-terminus II RC39_RS01980 PF07733 Bacterial DNA polymerase III alpha NTPase domain RC39_RS01980 PF14579 Helix-hairpin-helix motif RC39_RS01980 PF02811 PHP domain RC39_RS01980 PF00929 Exonuclease RC39_RS01985 PF01964 Radical SAM ThiC family RC39_RS02005 PF04028 Domain of unknown function (DUF374) RC39_RS02010 PF04055 Radical SAM superfamily RC39_RS02010 PF01938 TRAM domain RC39_RS02010 PF00919 Uncharacterized protein family UPF0004 RC39_RS02020 PF13184 NusA-like KH domain RC39_RS02020 PF08529 NusA N-terminal domain RC39_RS02030 PF04055 Radical SAM superfamily RC39_RS02035 PF05193 Peptidase M16 inactive domain RC39_RS02040 PF00271 Helicase conserved C-terminal domain RC39_RS02040 PF04851 Type III restriction enzyme, res subunit RC39_RS02045 PF01152 Bacterial-like globin RC39_RS02055 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS02060 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS02065 PF00005 ABC transporter RC39_RS02090 PF03143 Elongation factor Tu C-terminal domain RC39_RS02090 PF00009 Elongation factor Tu GTP binding domain RC39_RS02090 PF03144 Elongation factor Tu domain 2 RC39_RS02095 PF00471 Ribosomal protein L33 RC39_RS02110 PF02357 Transcription termination factor nusG RC39_RS02115 PF00298 Ribosomal protein L11, RNA binding domain RC39_RS02115 PF03946 Ribosomal protein L11, N-terminal domain RC39_RS02120 PF00687 Ribosomal protein L1p/L10e family RC39_RS02125 PF00466 Ribosomal protein L10 RC39_RS02130 PF00542 Ribosomal protein L7/L12 C-terminal domain RC39_RS02130 PF16320 Ribosomal protein L7/L12 dimerisation domain RC39_RS02135 PF04565 RNA polymerase Rpb2, domain 3 RC39_RS02135 PF10385 RNA polymerase beta subunit external 1 domain RC39_RS02135 PF00562 RNA polymerase Rpb2, domain 6 RC39_RS02135 PF04561 RNA polymerase Rpb2, domain 2 RC39_RS02135 PF04563 RNA polymerase beta subunit RC39_RS02135 PF04560 RNA polymerase Rpb2, domain 7 RC39_RS02140 PF04998 RNA polymerase Rpb1, domain 5 RC39_RS02140 PF05000 RNA polymerase Rpb1, domain 4 RC39_RS02140 PF04983 RNA polymerase Rpb1, domain 3 RC39_RS02140 PF00623 RNA polymerase Rpb1, domain 2 RC39_RS02140 PF04997 RNA polymerase Rpb1, domain 1 RC39_RS02145 PF00164 Ribosomal protein S12/S23 RC39_RS02150 PF00177 Ribosomal protein S7p/S5e RC39_RS02155 PF14492 Elongation Factor G, domain II RC39_RS02155 PF03764 Elongation factor G, domain IV RC39_RS02155 PF00009 Elongation factor Tu GTP binding domain RC39_RS02155 PF03144 Elongation factor Tu domain 2 RC39_RS02155 PF00679 Elongation factor G C-terminus RC39_RS02185 PF00218 Indole-3-glycerol phosphate synthase RC39_RS02200 PF00762 Ferrochelatase RC39_RS02205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RC39_RS02205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RC39_RS02210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RC39_RS02215 PF02272 DHHA1 domain RC39_RS02215 PF01411 tRNA synthetases class II (A) RC39_RS02215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RC39_RS02220 PF02545 Maf-like protein RC39_RS02225 PF00912 Transglycosylase RC39_RS02225 PF00905 Penicillin binding protein transpeptidase domain RC39_RS02225 PF17092 Penicillin-binding protein OB-like domain RC39_RS02230 PF07724 AAA domain (Cdc48 subfamily) RC39_RS02230 PF10431 C-terminal, D2-small domain, of ClpB protein RC39_RS02230 PF00004 ATPase family associated with various cellular activities (AAA) RC39_RS02230 PF17871 AAA lid domain RC39_RS02230 PF02861 Clp amino terminal domain, pathogenicity island component RC39_RS02235 PF02583 Metal-sensitive transcriptional repressor RC39_RS02240 PF13180 PDZ domain RC39_RS02240 PF03572 Peptidase family S41 RC39_RS02245 PF01259 SAICAR synthetase RC39_RS02250 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RC39_RS02265 PF01553 Acyltransferase RC39_RS02270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RC39_RS02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RC39_RS02275 PF00183 Hsp90 protein RC39_RS02280 PF00581 Rhodanese-like domain RC39_RS02300 PF02049 Flagellar hook-basal body complex protein FliE RC39_RS02305 PF00460 Flagella basal body rod protein RC39_RS02305 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RC39_RS02310 PF00460 Flagella basal body rod protein RC39_RS02325 PF03971 Monomeric isocitrate dehydrogenase RC39_RS02330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RC39_RS02330 PF00056 lactate/malate dehydrogenase, NAD binding domain RC39_RS02335 PF08442 ATP-grasp domain RC39_RS02335 PF00549 CoA-ligase RC39_RS02340 PF00549 CoA-ligase RC39_RS02340 PF02629 CoA binding domain RC39_RS02350 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RC39_RS02350 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RC39_RS02350 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RC39_RS02355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RC39_RS02375 PF00348 Polyprenyl synthetase RC39_RS02380 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RC39_RS02380 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RC39_RS02380 PF01488 Shikimate / quinate 5-dehydrogenase RC39_RS02385 PF04073 Aminoacyl-tRNA editing domain RC39_RS02385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RC39_RS02385 PF03129 Anticodon binding domain RC39_RS02395 PF03900 Porphobilinogen deaminase, C-terminal domain RC39_RS02395 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RC39_RS02400 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RC39_RS02410 PF07195 Flagellar hook-associated protein 2 C-terminus RC39_RS02410 PF07196 Flagellin hook IN motif RC39_RS02410 PF02465 Flagellar hook-associated protein 2 N-terminus RC39_RS02415 PF02561 Flagellar protein FliS RC39_RS02430 PF09285 Elongation factor P, C-terminal RC39_RS02430 PF01132 Elongation factor P (EF-P) OB domain RC39_RS02430 PF08207 Elongation factor P (EF-P) KOW-like domain RC39_RS02465 PF00171 Aldehyde dehydrogenase family RC39_RS02470 PF07992 Pyridine nucleotide-disulphide oxidoreductase RC39_RS02485 PF00772 DnaB-like helicase N terminal domain RC39_RS02485 PF03796 DnaB-like helicase C terminal domain RC39_RS02505 PF00925 GTP cyclohydrolase II RC39_RS02505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RC39_RS02510 PF09424 Yqey-like protein RC39_RS02515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RC39_RS02515 PF00205 Thiamine pyrophosphate enzyme, central domain RC39_RS02515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RC39_RS02520 PF10369 Small subunit of acetolactate synthase RC39_RS02525 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD RC39_RS02525 PF00132 Bacterial transferase hexapeptide (six repeats) RC39_RS02530 PF02547 Queuosine biosynthesis protein RC39_RS02535 PF00902 Sec-independent protein translocase protein (TatC) RC39_RS02540 PF02416 mttA/Hcf106 family RC39_RS02545 PF06969 HemN C-terminal domain RC39_RS02545 PF04055 Radical SAM superfamily RC39_RS02550 PF00293 NUDIX domain RC39_RS02555 PF00696 Amino acid kinase family RC39_RS02555 PF01842 ACT domain RC39_RS02555 PF13840 ACT domain RC39_RS02570 PF00809 Pterin binding enzyme RC39_RS02575 PF01653 NAD-dependent DNA ligase adenylation domain RC39_RS02575 PF03120 NAD-dependent DNA ligase OB-fold domain RC39_RS02575 PF00533 BRCA1 C Terminus (BRCT) domain RC39_RS02590 PF01687 Riboflavin kinase RC39_RS02590 PF06574 FAD synthetase RC39_RS02595 PF13847 Methyltransferase domain RC39_RS02610 PF03458 UPF0126 domain RC39_RS02620 PF10576 Iron-sulfur binding domain of endonuclease III RC39_RS02620 PF00730 HhH-GPD superfamily base excision DNA repair protein RC39_RS02620 PF00633 Helix-hairpin-helix motif RC39_RS02630 PF01116 Fructose-bisphosphate aldolase class-II RC39_RS02650 PF00209 Sodium:neurotransmitter symporter family RC39_RS02660 PF02683 Cytochrome C biogenesis protein transmembrane region RC39_RS02660 PF11412 Disulphide bond corrector protein DsbC RC39_RS02660 PF00085 Thioredoxin RC39_RS02665 PF03976 Polyphosphate kinase 2 (PPK2) RC39_RS02670 PF01546 Peptidase family M20/M25/M40 RC39_RS02670 PF07687 Peptidase dimerisation domain RC39_RS02675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RC39_RS02680 PF12704 MacB-like periplasmic core domain RC39_RS02680 PF02687 FtsX-like permease family RC39_RS02680 PF00005 ABC transporter RC39_RS02685 PF02321 Outer membrane efflux protein RC39_RS02700 PF03062 MBOAT, membrane-bound O-acyltransferase family RC39_RS02705 PF00210 Ferritin-like domain RC39_RS02710 PF12849 PBP superfamily domain RC39_RS02715 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS02720 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS02725 PF00005 ABC transporter RC39_RS02730 PF01554 MatE RC39_RS02745 PF00708 Acylphosphatase RC39_RS02745 PF17788 HypF Kae1-like domain RC39_RS02745 PF07503 HypF finger RC39_RS02745 PF01300 Telomere recombination RC39_RS02750 PF02492 CobW/HypB/UreG, nucleotide-binding domain RC39_RS02755 PF01455 HupF/HypC family RC39_RS02760 PF01924 Hydrogenase formation hypA family RC39_RS02765 PF00586 AIR synthase related protein, N-terminal domain RC39_RS02765 PF02769 AIR synthase related protein, C-terminal domain RC39_RS02770 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RC39_RS02780 PF00773 RNB domain RC39_RS02785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RC39_RS02785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RC39_RS02795 PF17782 DprA winged helix domain RC39_RS02795 PF02481 DNA recombination-mediator protein A RC39_RS02800 PF03652 Holliday junction resolvase RC39_RS02805 PF01189 16S rRNA methyltransferase RsmB/F RC39_RS02805 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF RC39_RS02805 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF RC39_RS02810 PF01625 Peptide methionine sulfoxide reductase RC39_RS02815 PF00719 Inorganic pyrophosphatase RC39_RS02825 PF01336 OB-fold nucleic acid binding domain RC39_RS02825 PF02938 GAD domain RC39_RS02825 PF00152 tRNA synthetases class II (D, K and N) RC39_RS02830 PF01513 ATP-NAD kinase RC39_RS02835 PF13476 AAA domain RC39_RS02840 PF00072 Response regulator receiver domain RC39_RS02840 PF00990 Diguanylate cyclase, GGDEF domain RC39_RS02845 PF01026 TatD related DNase RC39_RS02850 PF00877 NlpC/P60 family RC39_RS02850 PF01476 LysM domain RC39_RS02855 PF05036 Sporulation related domain RC39_RS02855 PF03330 Lytic transglycolase RC39_RS02875 PF01926 50S ribosome-binding GTPase RC39_RS02885 PF00905 Penicillin binding protein transpeptidase domain RC39_RS02885 PF03717 Penicillin-binding Protein dimerisation domain RC39_RS02890 PF01321 Creatinase/Prolidase N-terminal domain RC39_RS02890 PF00557 Metallopeptidase family M24 RC39_RS02980 PF04231 Endonuclease I RC39_RS03055 PF07650 KH domain RC39_RS03055 PF01926 50S ribosome-binding GTPase RC39_RS03060 PF10431 C-terminal, D2-small domain, of ClpB protein RC39_RS03060 PF07724 AAA domain (Cdc48 subfamily) RC39_RS03065 PF00227 Proteasome subunit RC39_RS03070 PF01281 Ribosomal protein L9, N-terminal domain RC39_RS03070 PF03948 Ribosomal protein L9, C-terminal domain RC39_RS03075 PF00764 Arginosuccinate synthase RC39_RS03080 PF01479 S4 domain RC39_RS03085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RC39_RS03090 PF12399 Branched-chain amino acid ATP-binding cassette transporter RC39_RS03090 PF00005 ABC transporter RC39_RS03095 PF04552 Sigma-54, DNA binding domain RC39_RS03095 PF04963 Sigma-54 factor, core binding domain RC39_RS03095 PF00309 Sigma-54 factor, Activator interacting domain (AID) RC39_RS03100 PF03605 Anaerobic c4-dicarboxylate membrane transporter RC39_RS03105 PF03814 Potassium-transporting ATPase A subunit RC39_RS03115 PF02669 K+-transporting ATPase, c chain RC39_RS03120 PF13493 Domain of unknown function (DUF4118) RC39_RS03120 PF02702 Osmosensitive K+ channel His kinase sensor domain RC39_RS03120 PF00512 His Kinase A (phospho-acceptor) domain RC39_RS03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RC39_RS03125 PF17757 UvrB interaction domain RC39_RS03125 PF12344 Ultra-violet resistance protein B RC39_RS03125 PF02151 UvrB/uvrC motif RC39_RS03125 PF00271 Helicase conserved C-terminal domain RC39_RS03125 PF04851 Type III restriction enzyme, res subunit RC39_RS03145 PF18074 Primosomal protein N C-terminal domain RC39_RS03145 PF00270 DEAD/DEAH box helicase RC39_RS03145 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RC39_RS03145 PF17764 3′ DNA-binding domain (3′BD) RC39_RS03145 PF00271 Helicase conserved C-terminal domain RC39_RS03150 PF00483 Nucleotidyl transferase RC39_RS03170 PF04551 GcpE protein RC39_RS03175 PF02107 Flagellar L-ring protein RC39_RS03180 PF01515 Phosphate acetyl/butaryl transferase RC39_RS03185 PF00871 Acetokinase family RC39_RS03200 PF01795 MraW methylase family RC39_RS03205 PF13145 PPIC-type PPIASE domain RC39_RS03210 PF02491 SHS2 domain inserted in FTSA RC39_RS03215 PF00091 Tubulin/FtsZ family, GTPase domain RC39_RS03215 PF12327 FtsZ family, C-terminal domain RC39_RS03220 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RC39_RS03220 PF00460 Flagella basal body rod protein RC39_RS03225 PF00460 Flagella basal body rod protein RC39_RS03225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RC39_RS03230 PF00120 Glutamine synthetase, catalytic domain RC39_RS03230 PF03951 Glutamine synthetase, beta-Grasp domain RC39_RS03240 PF01136 Peptidase family U32 RC39_RS03245 PF00731 AIR carboxylase RC39_RS03255 PF02091 Glycyl-tRNA synthetase alpha subunit RC39_RS03260 PF01784 NIF3 (NGG1p interacting factor 3) RC39_RS03270 PF02390 Putative methyltransferase RC39_RS03270 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) RC39_RS03275 PF00849 RNA pseudouridylate synthase RC39_RS03280 PF02978 Signal peptide binding domain RC39_RS03280 PF02881 SRP54-type protein, helical bundle domain RC39_RS03280 PF00448 SRP54-type protein, GTPase domain RC39_RS03285 PF00886 Ribosomal protein S16 RC39_RS03295 PF01782 RimM N-terminal domain RC39_RS03295 PF05239 PRC-barrel domain RC39_RS03300 PF01746 tRNA (Guanine-1)-methyltransferase RC39_RS03305 PF01245 Ribosomal protein L19 RC39_RS03310 PF00576 HIUase/Transthyretin family RC39_RS03315 PF01474 Class-II DAHP synthetase family RC39_RS03320 PF03960 ArsC family RC39_RS03325 PF14579 Helix-hairpin-helix motif RC39_RS03325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RC39_RS03325 PF07733 Bacterial DNA polymerase III alpha NTPase domain RC39_RS03325 PF02811 PHP domain RC39_RS03330 PF01168 Alanine racemase, N-terminal domain RC39_RS03335 PF00669 Bacterial flagellin N-terminal helical region RC39_RS03345 PF17827 PrmC N-terminal domain RC39_RS03345 PF05175 Methyltransferase small domain RC39_RS03350 PF01435 Peptidase family M48 RC39_RS03360 PF00994 Probable molybdopterin binding domain RC39_RS03365 PF01544 CorA-like Mg2+ transporter protein RC39_RS03385 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS03405 PF00497 Bacterial extracellular solute-binding proteins, family 3 RC39_RS03445 PF01025 GrpE RC39_RS03450 PF00012 Hsp70 protein RC39_RS03490 PF00155 Aminotransferase class I and II RC39_RS03495 PF00132 Bacterial transferase hexapeptide (six repeats) RC39_RS03495 PF06426 Serine acetyltransferase, N-terminal RC39_RS03500 PF17944 Arginine decarboxylase C-terminal helical extension RC39_RS03500 PF17810 Arginine decarboxylase helical bundle domain RC39_RS03500 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RC39_RS03505 PF13393 Histidyl-tRNA synthetase RC39_RS03505 PF03129 Anticodon binding domain RC39_RS03510 PF02223 Thymidylate kinase RC39_RS03515 PF01467 Cytidylyltransferase-like RC39_RS03520 PF02441 Flavoprotein RC39_RS03530 PF03180 NLPA lipoprotein RC39_RS03535 PF03180 NLPA lipoprotein RC39_RS03540 PF03180 NLPA lipoprotein RC39_RS03545 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS03550 PF09383 NIL domain RC39_RS03550 PF00005 ABC transporter RC39_RS03555 PF10458 Valyl tRNA synthetase tRNA binding arm RC39_RS03555 PF08264 Anticodon-binding domain of tRNA RC39_RS03555 PF00133 tRNA synthetases class I (I, L, M and V) RC39_RS03565 PF00580 UvrD/REP helicase N-terminal domain RC39_RS03565 PF13361 UvrD-like helicase C-terminal domain RC39_RS03575 PF08534 Redoxin RC39_RS03580 PF01568 Molydopterin dinucleotide binding domain RC39_RS03580 PF00384 Molybdopterin oxidoreductase RC39_RS03580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RC39_RS03585 PF12800 4Fe-4S binding domain RC39_RS03585 PF12838 4Fe-4S dicluster domain RC39_RS03590 PF13187 4Fe-4S dicluster domain RC39_RS03590 PF12801 4Fe-4S binding domain RC39_RS03595 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) RC39_RS03625 PF01743 Poly A polymerase head domain RC39_RS03625 PF12627 Probable RNA and SrmB- binding site of polymerase A RC39_RS03625 PF13735 tRNA nucleotidyltransferase domain 2 putative RC39_RS03630 PF00551 Formyl transferase RC39_RS03630 PF01842 ACT domain RC39_RS03635 PF00266 Aminotransferase class-V RC39_RS03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RC39_RS03645 PF00512 His Kinase A (phospho-acceptor) domain RC39_RS03650 PF02875 Mur ligase family, glutamate ligase domain RC39_RS03650 PF08245 Mur ligase middle domain RC39_RS03665 PF01820 D-ala D-ala ligase N-terminus RC39_RS03665 PF07478 D-ala D-ala ligase C-terminus RC39_RS03670 PF07499 RuvA, C-terminal domain RC39_RS03670 PF01330 RuvA N terminal domain RC39_RS03680 PF03023 Lipid II flippase MurJ RC39_RS03685 PF09190 DALR domain RC39_RS03685 PF01406 tRNA synthetases class I (C) catalytic domain RC39_RS03690 PF00664 ABC transporter transmembrane region RC39_RS03690 PF00005 ABC transporter RC39_RS03695 PF01180 Dihydroorotate dehydrogenase RC39_RS03700 PF05193 Peptidase M16 inactive domain RC39_RS03700 PF00675 Insulinase (Peptidase family M16) RC39_RS03705 PF00701 Dihydrodipicolinate synthetase family RC39_RS03720 PF00753 Metallo-beta-lactamase superfamily RC39_RS03725 PF02540 NAD synthase RC39_RS03730 PF02606 Tetraacyldisaccharide-1-P 4'-kinase RC39_RS03735 PF00291 Pyridoxal-phosphate dependent enzyme RC39_RS03740 PF02348 Cytidylyltransferase RC39_RS03750 PF00497 Bacterial extracellular solute-binding proteins, family 3 RC39_RS03755 PF00813 FliP family RC39_RS03760 PF12804 MobA-like NTP transferase domain RC39_RS03760 PF00132 Bacterial transferase hexapeptide (six repeats) RC39_RS03765 PF04127 DNA / pantothenate metabolism flavoprotein RC39_RS03765 PF02441 Flavoprotein RC39_RS03775 PF01255 Putative undecaprenyl diphosphate synthase RC39_RS03790 PF01416 tRNA pseudouridine synthase RC39_RS03795 PF00291 Pyridoxal-phosphate dependent enzyme RC39_RS03795 PF13291 ACT domain RC39_RS03810 PF05958 tRNA (Uracil-5-)-methyltransferase RC39_RS03815 PF03553 Na+/H+ antiporter family RC39_RS03820 PF00106 short chain dehydrogenase RC39_RS03830 PF00330 Aconitase family (aconitate hydratase) RC39_RS03830 PF11791 Aconitate B N-terminal domain RC39_RS03830 PF06434 Aconitate hydratase 2 N-terminus RC39_RS03835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RC39_RS03835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RC39_RS03845 PF01588 Putative tRNA binding domain RC39_RS03845 PF00133 tRNA synthetases class I (I, L, M and V) RC39_RS03845 PF09334 tRNA synthetases class I (M) RC39_RS03855 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain RC39_RS03880 PF00749 tRNA synthetases class I (E and Q), catalytic domain RC39_RS03885 PF00149 Calcineurin-like phosphoesterase RC39_RS03890 PF02666 Phosphatidylserine decarboxylase RC39_RS03895 PF01312 FlhB HrpN YscU SpaS Family RC39_RS03905 PF07690 Major Facilitator Superfamily RC39_RS03920 PF00202 Aminotransferase class-III RC39_RS03930 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RC39_RS03930 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RC39_RS03935 PF10502 Signal peptidase, peptidase S26 RC39_RS03940 PF03453 MoeA N-terminal region (domain I and II) RC39_RS03940 PF03454 MoeA C-terminal region (domain IV) RC39_RS03940 PF00994 Probable molybdopterin binding domain RC39_RS03945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RC39_RS03960 PF02885 Glycosyl transferase family, helical bundle domain RC39_RS03960 PF00117 Glutamine amidotransferase class-I RC39_RS03960 PF00591 Glycosyl transferase family, a/b domain RC39_RS03965 PF04715 Anthranilate synthase component I, N terminal region RC39_RS03965 PF00425 chorismate binding enzyme RC39_RS03970 PF00589 Phage integrase family RC39_RS03970 PF18644 Phage integrase SAM-like domain RC39_RS03980 PF02600 Disulfide bond formation protein DsbB RC39_RS03985 PF17425 Arylsulfotransferase Ig-like domain RC39_RS03985 PF05935 Arylsulfotransferase (ASST) RC39_RS03995 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RC39_RS04025 PF00771 FHIPEP family RC39_RS04030 PF02082 Transcriptional regulator RC39_RS04035 PF00312 Ribosomal protein S15 RC39_RS04040 PF01580 FtsK/SpoIIIE family RC39_RS04040 PF09397 Ftsk gamma domain RC39_RS04040 PF17854 FtsK alpha domain RC39_RS04045 PF00669 Bacterial flagellin N-terminal helical region RC39_RS04045 PF00700 Bacterial flagellin C-terminal helical region RC39_RS04060 PF16326 ABC transporter C-terminal domain RC39_RS04060 PF12848 ABC transporter RC39_RS04060 PF00005 ABC transporter RC39_RS04065 PF16736 Single Cache-like RC39_RS04065 PF00512 His Kinase A (phospho-acceptor) domain RC39_RS04065 PF00989 PAS fold RC39_RS04065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RC39_RS04070 PF00072 Response regulator receiver domain RC39_RS04070 PF00486 Transcriptional regulatory protein, C terminal RC39_RS04075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RC39_RS04075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RC39_RS04075 PF01842 ACT domain RC39_RS04085 PF00575 S1 RNA binding domain RC39_RS04090 PF02401 LytB protein RC39_RS04095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RC39_RS04100 PF03483 B3/4 domain RC39_RS04100 PF03147 Ferredoxin-fold anticodon binding domain RC39_RS04100 PF01588 Putative tRNA binding domain RC39_RS04100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RC39_RS04100 PF03484 tRNA synthetase B5 domain RC39_RS04105 PF01409 tRNA synthetases class II core domain (F) RC39_RS04105 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RC39_RS04110 PF01230 HIT domain RC39_RS04125 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS04130 PF00005 ABC transporter RC39_RS04135 PF01235 Sodium:alanine symporter family RC39_RS04140 PF00588 SpoU rRNA Methylase family RC39_RS04145 PF01168 Alanine racemase, N-terminal domain RC39_RS04145 PF00842 Alanine racemase, C-terminal domain RC39_RS04175 PF02630 SCO1/SenC RC39_RS04180 PF00291 Pyridoxal-phosphate dependent enzyme RC39_RS04185 PF00216 Bacterial DNA-binding protein RC39_RS04195 PF03061 Thioesterase superfamily RC39_RS04205 PF13722 5TM C-terminal transporter carbon starvation CstA RC39_RS04205 PF02554 Carbon starvation protein CstA RC39_RS04210 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RC39_RS04210 PF14572 Phosphoribosyl synthetase-associated domain RC39_RS04215 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS04220 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS04225 PF00497 Bacterial extracellular solute-binding proteins, family 3 RC39_RS04230 PF00005 ABC transporter RC39_RS04235 PF01739 CheR methyltransferase, SAM binding domain RC39_RS04240 PF00072 Response regulator receiver domain RC39_RS04240 PF01339 CheB methylesterase RC39_RS04245 PF02502 Ribose/Galactose Isomerase RC39_RS04255 PF00156 Phosphoribosyl transferase domain RC39_RS04265 PF00883 Cytosol aminopeptidase family, catalytic domain RC39_RS04270 PF01926 50S ribosome-binding GTPase RC39_RS04270 PF06071 Protein of unknown function (DUF933) RC39_RS04275 PF00206 Lyase RC39_RS04275 PF14698 Argininosuccinate lyase C-terminal RC39_RS04280 PF01293 Phosphoenolpyruvate carboxykinase RC39_RS04285 PF00682 HMGL-like RC39_RS04285 PF02436 Conserved carboxylase domain RC39_RS04285 PF00364 Biotin-requiring enzyme RC39_RS04290 PF00209 Sodium:neurotransmitter symporter family RC39_RS04295 PF00209 Sodium:neurotransmitter symporter family RC39_RS04300 PF00137 ATP synthase subunit C RC39_RS04335 PF06986 Type-1V conjugative transfer system mating pair stabilisation RC39_RS04345 PF01553 Acyltransferase RC39_RS04345 PF00501 AMP-binding enzyme RC39_RS04345 PF13193 AMP-binding enzyme C-terminal domain RC39_RS04390 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS04400 PF01043 SecA preprotein cross-linking domain RC39_RS04400 PF02810 SEC-C motif RC39_RS04400 PF07516 SecA Wing and Scaffold domain RC39_RS04400 PF07517 SecA DEAD-like domain RC39_RS04405 PF03548 Outer membrane lipoprotein carrier protein LolA RC39_RS04415 PF02689 Helicase RC39_RS04415 PF05970 PIF1-like helicase RC39_RS04425 PF00795 Carbon-nitrogen hydrolase RC39_RS04430 PF16916 Dimerisation domain of Zinc Transporter RC39_RS04430 PF01545 Cation efflux family RC39_RS04435 PF04371 Porphyromonas-type peptidyl-arginine deiminase RC39_RS04445 PF00672 HAMP domain RC39_RS04445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RC39_RS04450 PF02142 MGS-like domain RC39_RS04450 PF01808 AICARFT/IMPCHase bienzyme RC39_RS04455 PF00226 DnaJ domain RC39_RS04455 PF05099 Tellurite resistance protein TerB RC39_RS04460 PF02769 AIR synthase related protein, C-terminal domain RC39_RS04460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RC39_RS04460 PF00586 AIR synthase related protein, N-terminal domain RC39_RS04465 PF10396 GTP-binding protein TrmE N-terminus RC39_RS04465 PF01926 50S ribosome-binding GTPase RC39_RS04465 PF12631 MnmE helical domain RC39_RS04475 PF02096 60Kd inner membrane protein RC39_RS04475 PF14849 YidC periplasmic domain RC39_RS04480 PF01809 Putative membrane protein insertion efficiency factor RC39_RS04485 PF00825 Ribonuclease P RC39_RS04490 PF00468 Ribosomal protein L34 RC39_RS04510 PF03061 Thioesterase superfamily RC39_RS04540 PF01814 Hemerythrin HHE cation binding domain RC39_RS04545 PF08003 Protein of unknown function (DUF1698) RC39_RS04560 PF00565 Staphylococcal nuclease homologue RC39_RS04565 PF07687 Peptidase dimerisation domain RC39_RS04565 PF01546 Peptidase family M20/M25/M40 RC39_RS04570 PF08946 Osmosensory transporter coiled coil RC39_RS04570 PF00083 Sugar (and other) transporter RC39_RS04575 PF00497 Bacterial extracellular solute-binding proteins, family 3 RC39_RS04580 PF16668 Adhesin from Campylobacter RC39_RS04585 PF03883 Peroxide stress protein YaaA RC39_RS04590 PF01726 LexA DNA binding domain RC39_RS04590 PF00717 Peptidase S24-like RC39_RS04690 PF06074 Protein of unknown function (DUF935) RC39_RS04730 PF07687 Peptidase dimerisation domain RC39_RS04730 PF01546 Peptidase family M20/M25/M40 RC39_RS04745 PF07690 Major Facilitator Superfamily RC39_RS04760 PF17437 Family of unknown function (DUF5416) RC39_RS04765 PF13183 4Fe-4S dicluster domain RC39_RS04765 PF02754 Cysteine-rich domain RC39_RS04765 PF02665 Nitrate reductase gamma subunit RC39_RS04770 PF04055 Radical SAM superfamily RC39_RS04770 PF06969 HemN C-terminal domain RC39_RS04775 PF10788 Protein of unknown function (DUF2603) RC39_RS04780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RC39_RS04780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RC39_RS04785 PF00490 Delta-aminolevulinic acid dehydratase RC39_RS04790 PF00925 GTP cyclohydrolase II RC39_RS04795 PF02527 rRNA small subunit methyltransferase G RC39_RS04805 PF03601 Conserved hypothetical protein 698 RC39_RS04810 PF03466 LysR substrate binding domain RC39_RS04810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RC39_RS04815 PF04539 Sigma-70 region 3 RC39_RS04815 PF04545 Sigma-70, region 4 RC39_RS04815 PF00140 Sigma-70 factor, region 1.2 RC39_RS04815 PF04542 Sigma-70 region 2 RC39_RS04835 PF01434 Peptidase family M41 RC39_RS04835 PF06480 FtsH Extracellular RC39_RS04835 PF17862 AAA+ lid domain RC39_RS04835 PF00004 ATPase family associated with various cellular activities (AAA) RC39_RS04840 PF04055 Radical SAM superfamily RC39_RS04840 PF00919 Uncharacterized protein family UPF0004 RC39_RS04850 PF01761 3-dehydroquinate synthase RC39_RS04860 PF01702 Queuine tRNA-ribosyltransferase RC39_RS04880 PF01578 Cytochrome C assembly protein RC39_RS04880 PF05140 ResB-like family RC39_RS04885 PF00005 ABC transporter RC39_RS04890 PF12399 Branched-chain amino acid ATP-binding cassette transporter RC39_RS04890 PF00005 ABC transporter RC39_RS04895 PF02653 Branched-chain amino acid transport system / permease component RC39_RS04895 PF11862 Domain of unknown function (DUF3382) RC39_RS04900 PF02653 Branched-chain amino acid transport system / permease component RC39_RS04905 PF13458 Periplasmic binding protein RC39_RS04910 PF13458 Periplasmic binding protein RC39_RS04930 PF02774 Semialdehyde dehydrogenase, dimerisation domain RC39_RS04930 PF01118 Semialdehyde dehydrogenase, NAD binding domain RC39_RS04935 PF00158 Sigma-54 interaction domain RC39_RS04935 PF00072 Response regulator receiver domain RC39_RS04950 PF00521 DNA gyrase/topoisomerase IV, subunit A RC39_RS04950 PF03989 DNA gyrase C-terminal domain, beta-propeller RC39_RS04965 PF00009 Elongation factor Tu GTP binding domain RC39_RS04965 PF06421 GTP-binding protein LepA C-terminus RC39_RS04965 PF03144 Elongation factor Tu domain 2 RC39_RS04965 PF00679 Elongation factor G C-terminus RC39_RS04975 PF00529 HlyD membrane-fusion protein of T1SS RC39_RS04975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RC39_RS04980 PF00873 AcrB/AcrD/AcrF family RC39_RS04990 PF04376 Arginine-tRNA-protein transferase, N terminus RC39_RS04990 PF04377 Arginine-tRNA-protein transferase, C terminus RC39_RS05000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RC39_RS05000 PF00289 Biotin carboxylase, N-terminal domain RC39_RS05000 PF02785 Biotin carboxylase C-terminal domain RC39_RS05005 PF01098 Cell cycle protein RC39_RS05010 PF03033 Glycosyltransferase family 28 N-terminal domain RC39_RS05010 PF04101 Glycosyltransferase family 28 C-terminal domain RC39_RS05025 PF12833 Helix-turn-helix domain RC39_RS05030 PF02581 Thiamine monophosphate synthase RC39_RS05035 PF06968 Biotin and Thiamin Synthesis associated domain RC39_RS05035 PF04055 Radical SAM superfamily RC39_RS05040 PF05690 Thiazole biosynthesis protein ThiG RC39_RS05045 PF00899 ThiF family RC39_RS05045 PF00581 Rhodanese-like domain RC39_RS05060 PF01546 Peptidase family M20/M25/M40 RC39_RS05060 PF07687 Peptidase dimerisation domain RC39_RS05070 PF02146 Sir2 family RC39_RS05075 PF01713 Smr domain RC39_RS05075 PF00488 MutS domain V RC39_RS05085 PF02875 Mur ligase family, glutamate ligase domain RC39_RS05085 PF01225 Mur ligase family, catalytic domain RC39_RS05085 PF08245 Mur ligase middle domain RC39_RS05100 PF00571 CBS domain RC39_RS05100 PF00478 IMP dehydrogenase / GMP reductase domain RC39_RS05105 PF01425 Amidase RC39_RS05115 PF00133 tRNA synthetases class I (I, L, M and V) RC39_RS05115 PF08264 Anticodon-binding domain of tRNA RC39_RS05120 PF00994 Probable molybdopterin binding domain RC39_RS05120 PF02464 Competence-damaged protein RC39_RS05130 PF00881 Nitroreductase family RC39_RS05135 PF00881 Nitroreductase family RC39_RS05140 PF01066 CDP-alcohol phosphatidyltransferase RC39_RS05145 PF02163 Peptidase family M50 RC39_RS05145 PF17820 PDZ domain RC39_RS05150 PF04393 Protein of unknown function (DUF535) RC39_RS05155 PF01250 Ribosomal protein S6 RC39_RS05160 PF00436 Single-strand binding protein family RC39_RS05165 PF01084 Ribosomal protein S18 RC39_RS05170 PF05362 Lon protease (S16) C-terminal proteolytic domain RC39_RS05170 PF02190 ATP-dependent protease La (LON) substrate-binding domain RC39_RS05170 PF00004 ATPase family associated with various cellular activities (AAA) RC39_RS05180 PF02623 FliW protein RC39_RS05185 PF14748 Pyrroline-5-carboxylate reductase dimerisation RC39_RS05185 PF03807 NADP oxidoreductase coenzyme F420-dependent RC39_RS05210 PF02581 Thiamine monophosphate synthase RC39_RS05215 PF08543 Phosphomethylpyrimidine kinase RC39_RS05230 PF00271 Helicase conserved C-terminal domain RC39_RS05230 PF03461 TRCF domain RC39_RS05230 PF17757 UvrB interaction domain RC39_RS05230 PF00270 DEAD/DEAH box helicase RC39_RS05230 PF02559 CarD-like/TRCF domain RC39_RS05240 PF01551 Peptidase family M23 RC39_RS05240 PF04225 Opacity-associated protein A LysM-like domain RC39_RS05245 PF08245 Mur ligase middle domain RC39_RS05245 PF02875 Mur ligase family, glutamate ligase domain RC39_RS05260 PF00133 tRNA synthetases class I (I, L, M and V) RC39_RS05260 PF09334 tRNA synthetases class I (M) RC39_RS05260 PF13603 Leucyl-tRNA synthetase, Domain 2 RC39_RS05265 PF02355 Protein export membrane protein RC39_RS05265 PF07549 SecD/SecF GG Motif RC39_RS05270 PF02355 Protein export membrane protein RC39_RS05275 PF02699 Preprotein translocase subunit RC39_RS05285 PF00438 S-adenosylmethionine synthetase, N-terminal domain RC39_RS05285 PF02772 S-adenosylmethionine synthetase, central domain RC39_RS05285 PF02773 S-adenosylmethionine synthetase, C-terminal domain RC39_RS05290 PF00375 Sodium:dicarboxylate symporter family RC39_RS05295 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RC39_RS05295 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RC39_RS05300 PF01432 Peptidase family M3 RC39_RS05300 PF08439 Oligopeptidase F RC39_RS05310 PF13361 UvrD-like helicase C-terminal domain RC39_RS05310 PF00580 UvrD/REP helicase N-terminal domain RC39_RS05315 PF01509 TruB family pseudouridylate synthase (N terminal domain) RC39_RS05320 PF02599 Global regulator protein family RC39_RS05325 PF00288 GHMP kinases N terminal domain RC39_RS05330 PF01668 SmpB protein RC39_RS05340 PF02617 ATP-dependent Clp protease adaptor protein ClpS RC39_RS05345 PF00004 ATPase family associated with various cellular activities (AAA) RC39_RS05345 PF07724 AAA domain (Cdc48 subfamily) RC39_RS05345 PF17871 AAA lid domain RC39_RS05345 PF02861 Clp amino terminal domain, pathogenicity island component RC39_RS05345 PF10431 C-terminal, D2-small domain, of ClpB protein RC39_RS05350 PF03588 Leucyl/phenylalanyl-tRNA protein transferase RC39_RS05355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RC39_RS05355 PF08447 PAS fold RC39_RS05355 PF13426 PAS domain RC39_RS05360 PF01914 MarC family integral membrane protein RC39_RS05365 PF01641 SelR domain RC39_RS05370 PF04305 Protein of unknown function (DUF455) RC39_RS05375 PF01066 CDP-alcohol phosphatidyltransferase RC39_RS05385 PF01434 Peptidase family M41 RC39_RS05385 PF17862 AAA+ lid domain RC39_RS05385 PF00004 ATPase family associated with various cellular activities (AAA) RC39_RS05395 PF00072 Response regulator receiver domain RC39_RS05405 PF02719 Polysaccharide biosynthesis protein RC39_RS05410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RC39_RS05415 PF17836 PglD N-terminal domain RC39_RS05415 PF00132 Bacterial transferase hexapeptide (six repeats) RC39_RS05420 PF02397 Bacterial sugar transferase RC39_RS05425 PF00534 Glycosyl transferases group 1 RC39_RS05425 PF13477 Glycosyl transferase 4-like RC39_RS05430 PF18527 STT3/PglB C-terminal beta-barrel domain RC39_RS05430 PF02516 Oligosaccharyl transferase STT3 subunit RC39_RS05435 PF13439 Glycosyltransferase Family 4 RC39_RS05435 PF00534 Glycosyl transferases group 1 RC39_RS05440 PF00535 Glycosyl transferase family 2 RC39_RS05445 PF00534 Glycosyl transferases group 1 RC39_RS05445 PF13439 Glycosyltransferase Family 4 RC39_RS05450 PF00664 ABC transporter transmembrane region RC39_RS05450 PF00005 ABC transporter RC39_RS05455 PF16363 GDP-mannose 4,6 dehydratase RC39_RS05465 PF01075 Glycosyltransferase family 9 (heptosyltransferase) RC39_RS05470 PF03279 Bacterial lipid A biosynthesis acyltransferase RC39_RS05475 PF00535 Glycosyl transferase family 2 RC39_RS05480 PF00483 Nucleotidyl transferase RC39_RS05485 PF16363 GDP-mannose 4,6 dehydratase RC39_RS05495 PF05523 WxcM-like, C-terminal RC39_RS05505 PF02911 Formyl transferase, C-terminal domain RC39_RS05505 PF00551 Formyl transferase RC39_RS05510 PF00535 Glycosyl transferase family 2 RC39_RS05515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RC39_RS05545 PF00535 Glycosyl transferase family 2 RC39_RS05555 PF03062 MBOAT, membrane-bound O-acyltransferase family RC39_RS05565 PF13580 SIS domain RC39_RS05570 PF00294 pfkB family carbohydrate kinase RC39_RS05570 PF01467 Cytidylyltransferase-like RC39_RS05575 PF01370 NAD dependent epimerase/dehydratase family RC39_RS05580 PF08645 Polynucleotide kinase 3 phosphatase RC39_RS05595 PF00403 Heavy-metal-associated domain RC39_RS05600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RC39_RS05600 PF07498 Rho termination factor, N-terminal domain RC39_RS05600 PF07497 Rho termination factor, RNA-binding domain RC39_RS05605 PF12170 DNA polymerase III tau subunit V interacting with alpha RC39_RS05605 PF12169 DNA polymerase III subunits gamma and tau domain III RC39_RS05615 PF00403 Heavy-metal-associated domain RC39_RS05635 PF06738 Putative threonine/serine exporter RC39_RS05635 PF12821 Threonine/Serine exporter, ThrE RC39_RS05645 PF09335 SNARE associated Golgi protein RC39_RS05660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RC39_RS05665 PF01709 Transcriptional regulator RC39_RS05670 PF00893 Small Multidrug Resistance protein RC39_RS05675 PF00893 Small Multidrug Resistance protein RC39_RS05680 PF00750 tRNA synthetases class I (R) RC39_RS05680 PF05746 DALR anticodon binding domain RC39_RS05680 PF03485 Arginyl tRNA synthetase N terminal domain RC39_RS05685 PF02416 mttA/Hcf106 family RC39_RS05690 PF00625 Guanylate kinase RC39_RS05700 PF01311 Bacterial export proteins, family 1 RC39_RS05705 PF00005 ABC transporter RC39_RS05710 PF00889 Elongation factor TS RC39_RS05715 PF00318 Ribosomal protein S2 RC39_RS05730 PF00033 Cytochrome b/b6/petB RC39_RS05730 PF00032 Cytochrome b(C-terminal)/b6/petD RC39_RS05735 PF00355 Rieske [2Fe-2S] domain RC39_RS05735 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal RC39_RS05740 PF02040 Arsenical pump membrane protein RC39_RS05745 PF13932 GidA associated domain RC39_RS05745 PF01134 Glucose inhibited division protein A RC39_RS05755 PF13426 PAS domain RC39_RS05755 PF08447 PAS fold RC39_RS05755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RC39_RS05765 PF00375 Sodium:dicarboxylate symporter family RC39_RS05775 PF01384 Phosphate transporter family RC39_RS05780 PF01979 Amidohydrolase family RC39_RS05785 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RC39_RS05785 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RC39_RS05790 PF02934 GatB/GatE catalytic domain RC39_RS05790 PF02637 GatB domain RC39_RS05795 PF02664 S-Ribosylhomocysteinase (LuxS) RC39_RS05800 PF14226 non-haem dioxygenase in morphine synthesis N-terminal RC39_RS05800 PF03171 2OG-Fe(II) oxygenase superfamily RC39_RS05805 PF03180 NLPA lipoprotein RC39_RS05810 PF08267 Cobalamin-independent synthase, N-terminal domain RC39_RS05810 PF01717 Cobalamin-independent synthase, Catalytic domain RC39_RS05815 PF02219 Methylenetetrahydrofolate reductase RC39_RS05825 PF00119 ATP synthase A chain RC39_RS05830 PF18073 Rubredoxin metal binding domain RC39_RS05835 PF00448 SRP54-type protein, GTPase domain RC39_RS05850 PF12072 Domain of unknown function (DUF3552) RC39_RS05850 PF01966 HD domain RC39_RS05865 PF03631 Virulence factor BrkB RC39_RS05870 PF01565 FAD binding domain RC39_RS05870 PF02913 FAD linked oxidases, C-terminal domain RC39_RS05880 PF01476 LysM domain RC39_RS05880 PF08525 Opacity-associated protein A N-terminal motif RC39_RS05880 PF01551 Peptidase family M23 RC39_RS05890 PF02578 Multi-copper polyphenol oxidoreductase laccase RC39_RS05895 PF00677 Lumazine binding domain RC39_RS05905 PF00166 Chaperonin 10 Kd subunit RC39_RS05910 PF00118 TCP-1/cpn60 chaperonin family RC39_RS05915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RC39_RS05920 PF00486 Transcriptional regulatory protein, C terminal RC39_RS05920 PF00072 Response regulator receiver domain RC39_RS05925 PF01814 Hemerythrin HHE cation binding domain RC39_RS05945 PF00072 Response regulator receiver domain RC39_RS05945 PF00486 Transcriptional regulatory protein, C terminal RC39_RS05950 PF13180 PDZ domain RC39_RS05950 PF17820 PDZ domain RC39_RS05955 PF01556 DnaJ C terminal domain RC39_RS05955 PF00226 DnaJ domain RC39_RS05960 PF13411 MerR HTH family regulatory protein RC39_RS05965 PF00999 Sodium/hydrogen exchanger family RC39_RS05965 PF02254 TrkA-N domain RC39_RS05975 PF13419 Haloacid dehalogenase-like hydrolase RC39_RS05980 PF02092 Glycyl-tRNA synthetase beta subunit RC39_RS05985 PF01551 Peptidase family M23 RC39_RS05995 PF02541 Ppx/GppA phosphatase family RC39_RS06000 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ RC39_RS06005 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RC39_RS06015 PF07690 Major Facilitator Superfamily RC39_RS06025 PF01208 Uroporphyrinogen decarboxylase (URO-D) RC39_RS06030 PF04055 Radical SAM superfamily RC39_RS06040 PF08459 UvrC Helix-hairpin-helix N-terminal RC39_RS06040 PF02151 UvrB/uvrC motif RC39_RS06040 PF01541 GIY-YIG catalytic domain RC39_RS06050 PF00958 GMP synthase C terminal domain RC39_RS06050 PF00117 Glutamine amidotransferase class-I RC39_RS06050 PF02540 NAD synthase RC39_RS06060 PF02844 Phosphoribosylglycinamide synthetase, N domain RC39_RS06060 PF02843 Phosphoribosylglycinamide synthetase, C domain RC39_RS06060 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RC39_RS06075 PF03725 3' exoribonuclease family, domain 2 RC39_RS06075 PF01138 3' exoribonuclease family, domain 1 RC39_RS06075 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RC39_RS06075 PF00013 KH domain RC39_RS06075 PF00575 S1 RNA binding domain RC39_RS06095 PF07690 Major Facilitator Superfamily RC39_RS06100 PF01451 Low molecular weight phosphotyrosine protein phosphatase RC39_RS06105 PF05538 Campylobacter major outer membrane protein RC39_RS06110 PF01556 DnaJ C terminal domain RC39_RS06110 PF00684 DnaJ central domain RC39_RS06110 PF00226 DnaJ domain RC39_RS06115 PF00486 Transcriptional regulatory protein, C terminal RC39_RS06115 PF00072 Response regulator receiver domain RC39_RS06125 PF02132 RecR protein RC39_RS06125 PF13662 Toprim domain RC39_RS06130 PF01750 Hydrogenase maturation protease RC39_RS06135 PF01292 Prokaryotic cytochrome b561 RC39_RS06140 PF00374 Nickel-dependent hydrogenase RC39_RS06145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RC39_RS06145 PF10518 TAT (twin-arginine translocation) pathway signal sequence RC39_RS06145 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RC39_RS06150 PF05430 S-adenosyl-L-methionine-dependent methyltransferase RC39_RS06150 PF01266 FAD dependent oxidoreductase RC39_RS06155 PF11741 AMIN domain RC39_RS06155 PF01520 N-acetylmuramoyl-L-alanine amidase RC39_RS06165 PF00579 tRNA synthetases class I (W and Y) RC39_RS06170 PF02824 TGS domain RC39_RS06170 PF04607 Region found in RelA / SpoT proteins RC39_RS06170 PF13291 ACT domain RC39_RS06175 PF01192 RNA polymerase Rpb6 RC39_RS06180 PF00696 Amino acid kinase family RC39_RS06195 PF09383 NIL domain RC39_RS06195 PF00005 ABC transporter RC39_RS06200 PF02390 Putative methyltransferase RC39_RS06210 PF00849 RNA pseudouridylate synthase RC39_RS06210 PF01479 S4 domain RC39_RS06215 PF01098 Cell cycle protein RC39_RS06230 PF02386 Cation transport protein RC39_RS06235 PF02080 TrkA-C domain RC39_RS06235 PF02254 TrkA-N domain RC39_RS06240 PF02621 Menaquinone biosynthesis RC39_RS06250 PF03949 Malic enzyme, NAD binding domain RC39_RS06250 PF01515 Phosphate acetyl/butaryl transferase RC39_RS06250 PF00390 Malic enzyme, N-terminal domain RC39_RS06255 PF00749 tRNA synthetases class I (E and Q), catalytic domain RC39_RS06265 PF00289 Biotin carboxylase, N-terminal domain RC39_RS06265 PF02785 Biotin carboxylase C-terminal domain RC39_RS06265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RC39_RS06270 PF00364 Biotin-requiring enzyme RC39_RS06275 PF00692 dUTPase RC39_RS06280 PF02719 Polysaccharide biosynthesis protein RC39_RS06285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RC39_RS06300 PF00501 AMP-binding enzyme RC39_RS06300 PF00550 Phosphopantetheine attachment site RC39_RS06300 PF00668 Condensation domain RC39_RS06300 PF13193 AMP-binding enzyme C-terminal domain RC39_RS06305 PF02911 Formyl transferase, C-terminal domain RC39_RS06305 PF00551 Formyl transferase RC39_RS06320 PF02348 Cytidylyltransferase RC39_RS06330 PF13302 Acetyltransferase (GNAT) domain RC39_RS06335 PF13302 Acetyltransferase (GNAT) domain RC39_RS06340 PF00977 Histidine biosynthesis protein RC39_RS06345 PF00117 Glutamine amidotransferase class-I RC39_RS06355 PF03102 NeuB family RC39_RS06355 PF08666 SAF domain RC39_RS06375 PF00669 Bacterial flagellin N-terminal helical region RC39_RS06375 PF07196 Flagellin hook IN motif RC39_RS06375 PF00700 Bacterial flagellin C-terminal helical region RC39_RS06380 PF00669 Bacterial flagellin N-terminal helical region RC39_RS06380 PF07196 Flagellin hook IN motif RC39_RS06380 PF00700 Bacterial flagellin C-terminal helical region RC39_RS06395 PF07963 Prokaryotic N-terminal methylation motif RC39_RS06395 PF08334 Type II secretion system (T2SS), protein G RC39_RS06400 PF00814 Glycoprotease family RC39_RS06410 PF13288 DXP reductoisomerase C-terminal domain RC39_RS06410 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RC39_RS06410 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RC39_RS06425 PF05670 NFACT protein RNA binding domain RC39_RS06430 PF12804 MobA-like NTP transferase domain RC39_RS06435 PF02253 Phospholipase A1 RC39_RS06440 PF01032 FecCD transport family RC39_RS06445 PF01032 FecCD transport family RC39_RS06450 PF00005 ABC transporter RC39_RS06455 PF01497 Periplasmic binding protein RC39_RS06470 PF02335 Cytochrome c552 RC39_RS06475 PF03264 NapC/NirT cytochrome c family, N-terminal region RC39_RS06480 PF17941 Polyphosphate kinase C-terminal domain 1 RC39_RS06480 PF13090 Polyphosphate kinase C-terminal domain 2 RC39_RS06480 PF02503 Polyphosphate kinase middle domain RC39_RS06480 PF13089 Polyphosphate kinase N-terminal domain RC39_RS06505 PF05491 RuvB C-terminal winged helix domain RC39_RS06505 PF17864 RuvB AAA lid domain RC39_RS06505 PF05496 Holliday junction DNA helicase RuvB P-loop domain RC39_RS06510 PF01594 AI-2E family transporter RC39_RS06515 PF00206 Lyase RC39_RS06515 PF10415 Fumarase C C-terminus RC39_RS06520 PF01380 SIS domain RC39_RS06530 PF04055 Radical SAM superfamily RC39_RS06535 PF00860 Permease family RC39_RS06540 PF00156 Phosphoribosyl transferase domain RC39_RS06545 PF04333 MlaA lipoprotein RC39_RS06560 PF01725 Ham1 family RC39_RS06565 PF07690 Major Facilitator Superfamily RC39_RS06575 PF03841 L-seryl-tRNA selenium transferase RC39_RS06580 PF09106 Elongation factor SelB, winged helix RC39_RS06580 PF00009 Elongation factor Tu GTP binding domain RC39_RS06580 PF09107 Elongation factor SelB, winged helix RC39_RS06580 PF03144 Elongation factor Tu domain 2 RC39_RS06585 PF13098 Thioredoxin-like domain RC39_RS06595 PF00258 Flavodoxin RC39_RS06610 PF00199 Catalase RC39_RS06610 PF06628 Catalase-related immune-responsive RC39_RS06620 PF13309 HTH domain RC39_RS06620 PF08348 YheO-like PAS domain RC39_RS06625 PF01042 Endoribonuclease L-PSP RC39_RS06630 PF03606 C4-dicarboxylate anaerobic carrier RC39_RS06635 PF01053 Cys/Met metabolism PLP-dependent enzyme RC39_RS06640 PF10397 Adenylosuccinate lyase C-terminus RC39_RS06640 PF00206 Lyase RC39_RS06650 PF04023 FeoA domain RC39_RS06655 PF07670 Nucleoside recognition RC39_RS06655 PF02421 Ferrous iron transport protein B RC39_RS06655 PF07664 Ferrous iron transport protein B C terminus RC39_RS06660 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal RC39_RS06660 PF10518 TAT (twin-arginine translocation) pathway signal sequence RC39_RS06660 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RC39_RS06670 PF00121 Triosephosphate isomerase RC39_RS06675 PF00162 Phosphoglycerate kinase RC39_RS06680 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RC39_RS06680 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RC39_RS06685 PF01467 Cytidylyltransferase-like RC39_RS06700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RC39_RS06700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RC39_RS06700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RC39_RS06700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RC39_RS06705 PF03748 Flagellar basal body-associated protein FliL RC39_RS06710 PF01648 4'-phosphopantetheinyl transferase superfamily RC39_RS06720 PF00067 Cytochrome P450 RC39_RS06730 PF05159 Capsule polysaccharide biosynthesis protein RC39_RS06735 PF05159 Capsule polysaccharide biosynthesis protein RC39_RS06745 PF00483 Nucleotidyl transferase RC39_RS06750 PF00117 Glutamine amidotransferase class-I RC39_RS06755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RC39_RS06755 PF00391 PEP-utilising enzyme, mobile domain RC39_RS06760 PF01209 ubiE/COQ5 methyltransferase family RC39_RS06835 PF13419 Haloacid dehalogenase-like hydrolase RC39_RS06850 PF00483 Nucleotidyl transferase RC39_RS06855 PF13580 SIS domain RC39_RS06860 PF08544 GHMP kinases C terminal RC39_RS06860 PF00288 GHMP kinases N terminal domain RC39_RS06865 PF01370 NAD dependent epimerase/dehydratase family RC39_RS06870 PF16363 GDP-mannose 4,6 dehydratase RC39_RS06875 PF01370 NAD dependent epimerase/dehydratase family RC39_RS06880 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase RC39_RS06885 PF00535 Glycosyl transferase family 2 RC39_RS06885 PF01501 Glycosyl transferase family 8 RC39_RS06900 PF00535 Glycosyl transferase family 2 RC39_RS06900 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RC39_RS06910 PF01380 SIS domain RC39_RS06910 PF00571 CBS domain RC39_RS06915 PF02563 Polysaccharide biosynthesis/export protein RC39_RS06915 PF10531 SLBB domain RC39_RS06925 PF00005 ABC transporter RC39_RS06930 PF01061 ABC-2 type transporter RC39_RS06955 PF01171 PP-loop family RC39_RS06960 PF00919 Uncharacterized protein family UPF0004 RC39_RS06960 PF04055 Radical SAM superfamily RC39_RS06965 PF00472 RF-1 domain RC39_RS06965 PF03462 PCRF domain RC39_RS06975 PF01142 tRNA pseudouridine synthase D (TruD) RC39_RS06980 PF00586 AIR synthase related protein, N-terminal domain RC39_RS06980 PF02769 AIR synthase related protein, C-terminal domain RC39_RS07000 PF02119 Flagellar P-ring protein RC39_RS07020 PF07196 Flagellin hook IN motif RC39_RS07020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RC39_RS07030 PF01925 Sulfite exporter TauE/SafE RC39_RS07035 PF00482 Type II secretion system (T2SS), protein F RC39_RS07040 PF00437 Type II/IV secretion system protein RC39_RS07065 PF10371 Domain of unknown function RC39_RS07065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RC39_RS07065 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RC39_RS07065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RC39_RS07065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RC39_RS07070 PF13419 Haloacid dehalogenase-like hydrolase RC39_RS07075 PF00691 OmpA family RC39_RS07075 PF05736 OprF membrane domain RC39_RS07080 PF00380 Ribosomal protein S9/S16 RC39_RS07085 PF00572 Ribosomal protein L13 RC39_RS07090 PF13361 UvrD-like helicase C-terminal domain RC39_RS07090 PF00580 UvrD/REP helicase N-terminal domain RC39_RS07090 PF12705 PD-(D/E)XK nuclease superfamily RC39_RS07095 PF12705 PD-(D/E)XK nuclease superfamily RC39_RS07120 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP RC39_RS07120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RC39_RS07135 PF00115 Cytochrome C and Quinol oxidase polypeptide I RC39_RS07140 PF00072 Response regulator receiver domain RC39_RS07140 PF00486 Transcriptional regulatory protein, C terminal RC39_RS07145 PF08448 PAS fold RC39_RS07145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RC39_RS07145 PF08447 PAS fold RC39_RS07155 PF00117 Glutamine amidotransferase class-I RC39_RS07155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RC39_RS07175 PF00709 Adenylosuccinate synthetase RC39_RS07185 PF04143 Sulphur transport RC39_RS07190 PF01206 Sulfurtransferase TusA RC39_RS07195 PF00474 Sodium:solute symporter family RC39_RS07200 PF18327 Proline utilization A proline dehydrogenase N-terminal domain RC39_RS07200 PF14850 DNA-binding domain of Proline dehydrogenase RC39_RS07200 PF01619 Proline dehydrogenase RC39_RS07200 PF00171 Aldehyde dehydrogenase family RC39_RS07205 PF00586 AIR synthase related protein, N-terminal domain RC39_RS07205 PF02769 AIR synthase related protein, C-terminal domain RC39_RS07215 PF02743 Cache domain RC39_RS07215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RC39_RS07215 PF00672 HAMP domain RC39_RS07225 PF02634 FdhD/NarQ family RC39_RS07235 PF13247 4Fe-4S dicluster domain RC39_RS07240 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RC39_RS07240 PF01568 Molydopterin dinucleotide binding domain RC39_RS07240 PF00384 Molybdopterin oxidoreductase RC39_RS07245 PF01568 Molydopterin dinucleotide binding domain RC39_RS07245 PF00384 Molybdopterin oxidoreductase RC39_RS07245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RC39_RS07245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RC39_RS07245 PF00037 4Fe-4S binding domain RC39_RS07260 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RC39_RS07265 PF07731 Multicopper oxidase RC39_RS07265 PF07732 Multicopper oxidase RC39_RS07275 PF02391 MoaE protein RC39_RS07280 PF03453 MoeA N-terminal region (domain I and II) RC39_RS07280 PF03454 MoeA C-terminal region (domain IV) RC39_RS07280 PF00994 Probable molybdopterin binding domain RC39_RS07285 PF09827 CRISPR associated protein Cas2 RC39_RS07305 PF02769 AIR synthase related protein, C-terminal domain RC39_RS07305 PF00586 AIR synthase related protein, N-terminal domain RC39_RS07310 PF01121 Dephospho-CoA kinase RC39_RS07315 PF01678 Diaminopimelate epimerase RC39_RS07320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RC39_RS07330 PF00210 Ferritin-like domain RC39_RS07335 PF00342 Phosphoglucose isomerase RC39_RS07340 PF00483 Nucleotidyl transferase RC39_RS07350 PF00005 ABC transporter RC39_RS07355 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS07360 PF12849 PBP superfamily domain RC39_RS07365 PF03746 LamB/YcsF family RC39_RS07370 PF02682 Carboxyltransferase domain, subdomain C and D RC39_RS07375 PF02626 Carboxyltransferase domain, subdomain A and B RC39_RS07385 PF02525 Flavodoxin-like fold RC39_RS07390 PF01638 HxlR-like helix-turn-helix RC39_RS07400 PF00107 Zinc-binding dehydrogenase RC39_RS07400 PF08240 Alcohol dehydrogenase GroES-like domain RC39_RS07420 PF02661 Fic/DOC family RC39_RS07420 PF13784 Fic/DOC family N-terminal RC39_RS07440 PF07690 Major Facilitator Superfamily RC39_RS07445 PF13460 NAD(P)H-binding RC39_RS07450 PF01638 HxlR-like helix-turn-helix RC39_RS07460 PF01022 Bacterial regulatory protein, arsR family RC39_RS07480 PF00361 Proton-conducting membrane transporter RC39_RS07485 PF00361 Proton-conducting membrane transporter RC39_RS07490 PF00361 Proton-conducting membrane transporter RC39_RS07490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RC39_RS07495 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RC39_RS07500 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 RC39_RS07505 PF12838 4Fe-4S dicluster domain RC39_RS07510 PF00146 NADH dehydrogenase RC39_RS07515 PF01568 Molydopterin dinucleotide binding domain RC39_RS07515 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RC39_RS07515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RC39_RS07515 PF00384 Molybdopterin oxidoreductase RC39_RS07515 PF12838 4Fe-4S dicluster domain RC39_RS07530 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit RC39_RS07535 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit RC39_RS07540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit RC39_RS07545 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 RC39_RS07550 PF00005 ABC transporter RC39_RS07555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RC39_RS07555 PF00005 ABC transporter RC39_RS07560 PF12911 N-terminal TM domain of oligopeptide transport permease C RC39_RS07560 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS07570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RC39_RS07575 PF00384 Molybdopterin oxidoreductase RC39_RS07575 PF01568 Molydopterin dinucleotide binding domain RC39_RS07575 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RC39_RS07580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RC39_RS07580 PF01568 Molydopterin dinucleotide binding domain RC39_RS07580 PF00384 Molybdopterin oxidoreductase RC39_RS07585 PF01568 Molydopterin dinucleotide binding domain RC39_RS07585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RC39_RS07585 PF00384 Molybdopterin oxidoreductase RC39_RS07590 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RC39_RS07590 PF00384 Molybdopterin oxidoreductase RC39_RS07590 PF01568 Molydopterin dinucleotide binding domain RC39_RS07595 PF13247 4Fe-4S dicluster domain RC39_RS07595 PF12800 4Fe-4S binding domain RC39_RS07610 PF00970 Oxidoreductase FAD-binding domain RC39_RS07610 PF00042 Globin RC39_RS07610 PF00175 Oxidoreductase NAD-binding domain RC39_RS07615 PF00005 ABC transporter RC39_RS07620 PF07690 Major Facilitator Superfamily RC39_RS07635 PF01176 Translation initiation factor 1A / IF-1 RC39_RS07640 PF00444 Ribosomal protein L36 RC39_RS07645 PF00416 Ribosomal protein S13/S18 RC39_RS07650 PF00411 Ribosomal protein S11 RC39_RS07655 PF00163 Ribosomal protein S4/S9 N-terminal domain RC39_RS07655 PF01479 S4 domain RC39_RS07660 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RC39_RS07660 PF01000 RNA polymerase Rpb3/RpoA insert domain RC39_RS07660 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RC39_RS07665 PF01196 Ribosomal protein L17 RC39_RS07670 PF08029 HisG, C-terminal domain RC39_RS07670 PF01634 ATP phosphoribosyltransferase RC39_RS07675 PF00815 Histidinol dehydrogenase RC39_RS07680 PF00475 Imidazoleglycerol-phosphate dehydratase RC39_RS07680 PF08645 Polynucleotide kinase 3 phosphatase RC39_RS07685 PF00117 Glutamine amidotransferase class-I RC39_RS07690 PF00977 Histidine biosynthesis protein RC39_RS07700 PF00977 Histidine biosynthesis protein RC39_RS07705 PF01502 Phosphoribosyl-AMP cyclohydrolase RC39_RS07705 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RC39_RS07710 PF14602 Hexapeptide repeat of succinyl-transferase RC39_RS07710 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle RC39_RS07715 PF01883 Iron-sulfur cluster assembly protein RC39_RS07715 PF10609 NUBPL iron-transfer P-loop NTPase RC39_RS07720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RC39_RS07720 PF02542 YgbB family RC39_RS07725 PF00072 Response regulator receiver domain RC39_RS07725 PF00486 Transcriptional regulatory protein, C terminal RC39_RS07730 PF14306 PUA-like domain RC39_RS07730 PF01747 ATP-sulfurylase RC39_RS07735 PF04608 Phosphatidylglycerophosphatase A RC39_RS07740 PF01649 Ribosomal protein S20 RC39_RS07745 PF00472 RF-1 domain RC39_RS07745 PF03462 PCRF domain RC39_RS07750 PF10615 Protein of unknown function (DUF2470) RC39_RS07750 PF01243 Pyridoxamine 5'-phosphate oxidase RC39_RS07755 PF07715 TonB-dependent Receptor Plug Domain RC39_RS07755 PF00593 TonB dependent receptor RC39_RS07760 PF01032 FecCD transport family RC39_RS07765 PF00005 ABC transporter RC39_RS07770 PF01497 Periplasmic binding protein RC39_RS07785 PF14815 NUDIX domain RC39_RS07785 PF00730 HhH-GPD superfamily base excision DNA repair protein RC39_RS07815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RC39_RS07815 PF01872 RibD C-terminal domain RC39_RS07825 PF03313 Serine dehydratase alpha chain RC39_RS07825 PF03315 Serine dehydratase beta chain RC39_RS07845 PF01618 MotA/TolQ/ExbB proton channel family RC39_RS07850 PF02472 Biopolymer transport protein ExbD/TolR RC39_RS07875 PF01264 Chorismate synthase RC39_RS07880 PF00035 Double-stranded RNA binding motif RC39_RS07880 PF14622 Ribonuclease-III-like RC39_RS07885 PF00075 RNase H RC39_RS07895 PF01807 CHC2 zinc finger RC39_RS07895 PF08275 DNA primase catalytic core, N-terminal domain RC39_RS07910 PF08245 Mur ligase middle domain RC39_RS07910 PF02875 Mur ligase family, glutamate ligase domain RC39_RS07915 PF02575 YbaB/EbfC DNA-binding family RC39_RS07925 PF00348 Polyprenyl synthetase RC39_RS07930 PF00456 Transketolase, thiamine diphosphate binding domain RC39_RS07930 PF02780 Transketolase, C-terminal domain RC39_RS07930 PF02779 Transketolase, pyrimidine binding domain RC39_RS07935 PF02405 Permease MlaE RC39_RS07940 PF00005 ABC transporter RC39_RS07950 PF03886 ABC-type transport auxiliary lipoprotein component RC39_RS07950 PF02470 MlaD protein RC39_RS07960 PF00557 Metallopeptidase family M24 RC39_RS07965 PF01177 Asp/Glu/Hydantoin racemase RC39_RS07970 PF00877 NlpC/P60 family RC39_RS07975 PF06965 Na+/H+ antiporter 1 RC39_RS07980 PF06965 Na+/H+ antiporter 1 RC39_RS07995 PF03239 Iron permease FTR1 family RC39_RS08000 PF10634 Fe2+ transport protein RC39_RS08020 PF00005 ABC transporter RC39_RS08075 PF14743 DNA ligase OB-like domain RC39_RS08075 PF01068 ATP dependent DNA ligase domain RC39_RS08090 PF03952 Enolase, N-terminal domain RC39_RS08090 PF00113 Enolase, C-terminal TIM barrel domain RC39_RS08095 PF00154 recA bacterial DNA recombination protein RC39_RS08100 PF02621 Menaquinone biosynthesis RC39_RS08105 PF01313 Bacterial export proteins, family 3 RC39_RS08110 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RC39_RS08120 PF00459 Inositol monophosphatase family RC39_RS08125 PF00285 Citrate synthase, C-terminal domain RC39_RS08135 PF06968 Biotin and Thiamin Synthesis associated domain RC39_RS08135 PF04055 Radical SAM superfamily RC39_RS08140 PF01751 Toprim domain RC39_RS08140 PF01396 Topoisomerase DNA binding C4 zinc finger RC39_RS08140 PF01131 DNA topoisomerase RC39_RS08155 PF00528 Binding-protein-dependent transport system inner membrane component RC39_RS08170 PF13416 Bacterial extracellular solute-binding protein RC39_RS08185 PF00344 SecY translocase RC39_RS08190 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RC39_RS08195 PF00333 Ribosomal protein S5, N-terminal domain RC39_RS08195 PF03719 Ribosomal protein S5, C-terminal domain RC39_RS08200 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RC39_RS08205 PF00347 Ribosomal protein L6 RC39_RS08210 PF00410 Ribosomal protein S8 RC39_RS08215 PF00253 Ribosomal protein S14p/S29e RC39_RS08220 PF00673 ribosomal L5P family C-terminus RC39_RS08220 PF00281 Ribosomal protein L5 RC39_RS08225 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RC39_RS08225 PF00467 KOW motif RC39_RS08230 PF00238 Ribosomal protein L14p/L23e RC39_RS08235 PF00366 Ribosomal protein S17 RC39_RS08240 PF00831 Ribosomal L29 protein RC39_RS08245 PF00252 Ribosomal protein L16p/L10e RC39_RS08250 PF07650 KH domain RC39_RS08250 PF00189 Ribosomal protein S3, C-terminal domain RC39_RS08255 PF00237 Ribosomal protein L22p/L17e RC39_RS08260 PF00203 Ribosomal protein S19 RC39_RS08265 PF00181 Ribosomal Proteins L2, RNA binding domain RC39_RS08265 PF03947 Ribosomal Proteins L2, C-terminal domain RC39_RS08270 PF00276 Ribosomal protein L23 RC39_RS08275 PF00573 Ribosomal protein L4/L1 family RC39_RS08280 PF00297 Ribosomal protein L3 RC39_RS08285 PF00338 Ribosomal protein S10p/S20e RC39_RS08290 PF01479 S4 domain RC39_RS08290 PF00849 RNA pseudouridylate synthase RC39_RS08295 PF00753 Metallo-beta-lactamase superfamily RC39_RS08295 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RC39_RS08295 PF17770 Ribonuclease J C-terminal domain RC39_RS08300 PF00398 Ribosomal RNA adenine dimethylase RC39_RS08310 PF04055 Radical SAM superfamily RC39_RS08330 PF05686 Glycosyl transferase family 90 RC39_RS08350 PF00694 Aconitase C-terminal domain RC39_RS08355 PF00330 Aconitase family (aconitate hydratase) RC39_RS08360 PF00180 Isocitrate/isopropylmalate dehydrogenase RC39_RS08365 PF08502 LeuA allosteric (dimerisation) domain RC39_RS08365 PF00682 HMGL-like RC39_RS08385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RC39_RS08390 PF02086 D12 class N6 adenine-specific DNA methyltransferase RC39_RS08405 PF05315 ICEA Protein RC39_RS08410 PF01555 DNA methylase RC39_RS08415 PF14489 QueF-like protein RC39_RS08425 PF07559 Flagellar basal body protein FlaE RC39_RS08425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RC39_RS08425 PF00460 Flagella basal body rod protein RC39_RS08425 PF07196 Flagellin hook IN motif RC39_RS08430 PF02075 Crossover junction endodeoxyribonuclease RuvC RC39_RS08435 PF11638 DnaA N-terminal domain RC39_RS08435 PF08299 Bacterial dnaA protein helix-turn-helix RC39_RS08435 PF00308 Bacterial dnaA protein RC39_RS08440 PF02768 DNA polymerase III beta subunit, C-terminal domain RC39_RS08440 PF00712 DNA polymerase III beta subunit, N-terminal domain RC39_RS08440 PF02767 DNA polymerase III beta subunit, central domain RC39_RS08445 PF01751 Toprim domain RC39_RS08445 PF00204 DNA gyrase B RC39_RS08445 PF00986 DNA gyrase B subunit, carboxyl terminus RC39_RS08445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RC39_RS08460 PF13726 Na+-H+ antiporter family RC39_RS08460 PF03553 Na+/H+ antiporter family RC39_RS08465 PF00310 Glutamine amidotransferases class-II RC39_RS08465 PF04898 Glutamate synthase central domain RC39_RS08465 PF01645 Conserved region in glutamate synthase RC39_RS08465 PF01493 GXGXG motif RC39_RS08470 PF07992 Pyridine nucleotide-disulphide oxidoreductase RC39_RS08470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RC39_RS08475 PF01351 Ribonuclease HII RC39_RS08485 PF02915 Rubrerythrin RC39_RS08490 PF00920 Dehydratase family RC39_RS08495 PF07274 Protein of unknown function (DUF1440) RC39_RS08505 PF06508 Queuosine biosynthesis protein QueC RC39_RS08520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RC39_RS08520 PF00672 HAMP domain RC39_RS08520 PF12729 Four helix bundle sensory module for signal transduction RC39_RS08525 PF00034 Cytochrome c RC39_RS08525 PF03150 Di-haem cytochrome c peroxidase RC39_RS08525 PF14376 Haem-binding domain RC39_RS08530 PF01557 Fumarylacetoacetate (FAA) hydrolase family RC39_RS08535 PF00849 RNA pseudouridylate synthase RC39_RS08540 PF10397 Adenylosuccinate lyase C-terminus RC39_RS08540 PF00206 Lyase RC39_RS08545 PF02867 Ribonucleotide reductase, barrel domain RC39_RS08545 PF00317 Ribonucleotide reductase, all-alpha domain RC39_RS08545 PF03477 ATP cone domain RC39_RS08550 PF00375 Sodium:dicarboxylate symporter family RC39_RS08555 PF02511 Thymidylate synthase complementing protein RC39_RS08560 PF06418 CTP synthase N-terminus RC39_RS08560 PF00117 Glutamine amidotransferase class-I RC39_RS08565 PF01368 DHH family RC39_RS08565 PF17768 RecJ OB domain RC39_RS08565 PF02272 DHHA1 domain RC39_RS08570 PF00710 Asparaginase, N-terminal RC39_RS08570 PF17763 Glutaminase/Asparaginase C-terminal domain RC39_RS08665 PF01051 Initiator Replication protein RC39_RS08700 PF10124 Mu-like prophage major head subunit gpT RC39_RS08780 PF00672 HAMP domain RC39_RS08780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RC39_RS08780 PF17200 Single Cache domain 2