locus-tag class description BD29_RS00005 PF11638 DnaA N-terminal domain BD29_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix BD29_RS00005 PF00308 Bacterial dnaA protein BD29_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BD29_RS00010 PF02767 DNA polymerase III beta subunit, central domain BD29_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BD29_RS00015 PF00204 DNA gyrase B BD29_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus BD29_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD29_RS00015 PF01751 Toprim domain BD29_RS00030 PF03553 Na+/H+ antiporter family BD29_RS00030 PF13726 Na+-H+ antiporter family BD29_RS00035 PF00310 Glutamine amidotransferases class-II BD29_RS00035 PF01645 Conserved region in glutamate synthase BD29_RS00035 PF01493 GXGXG motif BD29_RS00035 PF04898 Glutamate synthase central domain BD29_RS00040 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD29_RS00040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BD29_RS00045 PF01351 Ribonuclease HII BD29_RS00055 PF02915 Rubrerythrin BD29_RS00060 PF00920 Dehydratase family BD29_RS00065 PF07274 Protein of unknown function (DUF1440) BD29_RS00075 PF06508 Queuosine biosynthesis protein QueC BD29_RS00090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS00090 PF12729 Four helix bundle sensory module for signal transduction BD29_RS00090 PF00672 HAMP domain BD29_RS00095 PF00034 Cytochrome c BD29_RS00095 PF03150 Di-haem cytochrome c peroxidase BD29_RS00095 PF14376 Haem-binding domain BD29_RS00100 PF01557 Fumarylacetoacetate (FAA) hydrolase family BD29_RS00105 PF00849 RNA pseudouridylate synthase BD29_RS00110 PF00206 Lyase BD29_RS00110 PF10397 Adenylosuccinate lyase C-terminus BD29_RS00115 PF00317 Ribonucleotide reductase, all-alpha domain BD29_RS00115 PF02867 Ribonucleotide reductase, barrel domain BD29_RS00115 PF03477 ATP cone domain BD29_RS00120 PF00375 Sodium:dicarboxylate symporter family BD29_RS00125 PF02511 Thymidylate synthase complementing protein BD29_RS00130 PF00117 Glutamine amidotransferase class-I BD29_RS00130 PF06418 CTP synthase N-terminus BD29_RS00135 PF01368 DHH family BD29_RS00135 PF02272 DHHA1 domain BD29_RS00135 PF17768 RecJ OB domain BD29_RS00140 PF00710 Asparaginase, N-terminal BD29_RS00140 PF17763 Glutaminase/Asparaginase C-terminal domain BD29_RS00185 PF05140 ResB-like family BD29_RS00185 PF01578 Cytochrome C assembly protein BD29_RS00210 PF07690 Major Facilitator Superfamily BD29_RS00230 PF00679 Elongation factor G C-terminus BD29_RS00230 PF00009 Elongation factor Tu GTP binding domain BD29_RS00230 PF03144 Elongation factor Tu domain 2 BD29_RS00245 PF03963 Flagellar hook capping protein - N-terminal region BD29_RS00250 PF00460 Flagella basal body rod protein BD29_RS00250 PF07559 Flagellar basal body protein FlaE BD29_RS00250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD29_RS00275 PF00939 Sodium:sulfate symporter transmembrane region BD29_RS00290 PF00939 Sodium:sulfate symporter transmembrane region BD29_RS00300 PF03641 Possible lysine decarboxylase BD29_RS00305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BD29_RS00305 PF04509 CheC-like family BD29_RS00310 PF02154 Flagellar motor switch protein FliM BD29_RS00310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BD29_RS00315 PF04539 Sigma-70 region 3 BD29_RS00315 PF04545 Sigma-70, region 4 BD29_RS00315 PF04542 Sigma-70 region 2 BD29_RS00325 PF10609 NUBPL iron-transfer P-loop NTPase BD29_RS00330 PF00448 SRP54-type protein, GTPase domain BD29_RS00335 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BD29_RS00340 PF01220 Dehydroquinase class II BD29_RS00345 PF01979 Amidohydrolase family BD29_RS00350 PF01343 Peptidase family S49 BD29_RS00365 PF01814 Hemerythrin HHE cation binding domain BD29_RS00370 PF01814 Hemerythrin HHE cation binding domain BD29_RS00380 PF01814 Hemerythrin HHE cation binding domain BD29_RS00390 PF11870 Domain of unknown function (DUF3390) BD29_RS00390 PF13183 4Fe-4S dicluster domain BD29_RS00390 PF02589 LUD domain BD29_RS00395 PF02754 Cysteine-rich domain BD29_RS00400 PF02652 L-lactate permease BD29_RS00405 PF03498 Cytolethal distending toxin A/C domain BD29_RS00410 PF03372 Endonuclease/Exonuclease/phosphatase family BD29_RS00425 PF01654 Cytochrome bd terminal oxidase subunit I BD29_RS00430 PF02322 Cytochrome bd terminal oxidase subunit II BD29_RS00435 PF01177 Asp/Glu/Hydantoin racemase BD29_RS00440 PF03167 Uracil DNA glycosylase superfamily BD29_RS00445 PF10415 Fumarase C C-terminus BD29_RS00445 PF00206 Lyase BD29_RS00450 PF03605 Anaerobic c4-dicarboxylate membrane transporter BD29_RS00480 PF00829 Ribosomal prokaryotic L21 protein BD29_RS00485 PF01016 Ribosomal L27 protein BD29_RS00490 PF01926 50S ribosome-binding GTPase BD29_RS00490 PF01018 GTP1/OBG BD29_RS00495 PF00696 Amino acid kinase family BD29_RS00500 PF00551 Formyl transferase BD29_RS00500 PF02911 Formyl transferase, C-terminal domain BD29_RS00505 PF02237 Biotin protein ligase C terminal domain BD29_RS00505 PF03099 Biotin/lipoate A/B protein ligase family BD29_RS00505 PF08279 HTH domain BD29_RS00510 PF13614 AAA domain BD29_RS00515 PF17762 HTH domain found in ParB protein BD29_RS00515 PF02195 ParB-like nuclease domain BD29_RS00525 PF00430 ATP synthase B/B' CF(0) BD29_RS00530 PF00213 ATP synthase delta (OSCP) subunit BD29_RS00535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD29_RS00535 PF00306 ATP synthase alpha/beta chain, C terminal domain BD29_RS00535 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD29_RS00540 PF00231 ATP synthase BD29_RS00545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD29_RS00545 PF02874 ATP synthase alpha/beta family, beta-barrel domain BD29_RS00550 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BD29_RS00555 PF01618 MotA/TolQ/ExbB proton channel family BD29_RS00560 PF02472 Biopolymer transport protein ExbD/TolR BD29_RS00575 PF00691 OmpA family BD29_RS00575 PF00223 Photosystem I psaA/psaB protein BD29_RS00585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD29_RS00590 PF00698 Acyl transferase domain BD29_RS00595 PF01048 Phosphorylase superfamily BD29_RS00600 PF01171 PP-loop family BD29_RS00615 PF02130 Uncharacterized protein family UPF0054 BD29_RS00625 PF01207 Dihydrouridine synthase (Dus) BD29_RS00635 PF01258 Prokaryotic dksA/traR C4-type zinc finger BD29_RS00640 PF02590 Predicted SPOUT methyltransferase BD29_RS00645 PF01039 Carboxyl transferase domain BD29_RS00645 PF17848 Acetyl-coA carboxylase zinc finger domain BD29_RS00650 PF00459 Inositol monophosphatase family BD29_RS00655 PF01103 Surface antigen BD29_RS00655 PF07244 Surface antigen variable number repeat BD29_RS00670 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BD29_RS00680 PF00288 GHMP kinases N terminal domain BD29_RS00690 PF04760 Translation initiation factor IF-2, N-terminal region BD29_RS00690 PF11987 Translation-initiation factor 2 BD29_RS00690 PF00009 Elongation factor Tu GTP binding domain BD29_RS00695 PF02033 Ribosome-binding factor A BD29_RS00700 PF17384 RimP C-terminal SH3 domain BD29_RS00700 PF02576 RimP N-terminal domain BD29_RS00705 PF12102 Domain of unknown function (DUF3578) BD29_RS00705 PF07728 AAA domain (dynein-related subfamily) BD29_RS00715 PF00950 ABC 3 transport family BD29_RS00720 PF00005 ABC transporter BD29_RS00730 PF00672 HAMP domain BD29_RS00730 PF02743 Cache domain BD29_RS00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS00740 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD29_RS00745 PF00085 Thioredoxin BD29_RS00750 PF02021 Uncharacterised protein family UPF0102 BD29_RS00755 PF00742 Homoserine dehydrogenase BD29_RS00755 PF01842 ACT domain BD29_RS00755 PF03447 Homoserine dehydrogenase, NAD binding domain BD29_RS00760 PF00155 Aminotransferase class I and II BD29_RS00775 PF08032 RNA 2'-O ribose methyltransferase substrate binding BD29_RS00775 PF00588 SpoU rRNA Methylase family BD29_RS00780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BD29_RS00785 PF01197 Ribosomal protein L31 BD29_RS00790 PF04452 RNA methyltransferase BD29_RS00815 PF06463 Molybdenum Cofactor Synthesis C BD29_RS00815 PF04055 Radical SAM superfamily BD29_RS00840 PF02659 Putative manganese efflux pump BD29_RS00855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BD29_RS00855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BD29_RS00860 PF16653 Saccharopine dehydrogenase C-terminal domain BD29_RS00860 PF03435 Saccharopine dehydrogenase NADP binding domain BD29_RS00865 PF00005 ABC transporter BD29_RS00865 PF08402 TOBE domain BD29_RS00875 PF13416 Bacterial extracellular solute-binding protein BD29_RS00885 PF05992 SbmA/BacA-like family BD29_RS00890 PF00571 CBS domain BD29_RS00890 PF03471 Transporter associated domain BD29_RS00890 PF01595 Cyclin M transmembrane N-terminal domain BD29_RS00900 PF08274 PhnA Zinc-Ribbon BD29_RS00900 PF03831 PhnA domain BD29_RS00905 PF03741 Integral membrane protein TerC family BD29_RS00910 PF00551 Formyl transferase BD29_RS00915 PF01256 Carbohydrate kinase BD29_RS00915 PF03853 YjeF-related protein N-terminus BD29_RS00925 PF01078 Magnesium chelatase, subunit ChlI BD29_RS00925 PF13335 Magnesium chelatase, subunit ChlI C-terminal BD29_RS00930 PF01327 Polypeptide deformylase BD29_RS00935 PF00574 Clp protease BD29_RS00940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BD29_RS00940 PF05698 Bacterial trigger factor protein (TF) C-terminus BD29_RS00940 PF05697 Bacterial trigger factor protein (TF) BD29_RS00945 PF01227 GTP cyclohydrolase I BD29_RS00950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD29_RS00950 PF18269 T3SS EscN ATPase C-terminal domain BD29_RS00955 PF00156 Phosphoribosyl transferase domain BD29_RS00960 PF01113 Dihydrodipicolinate reductase, N-terminus BD29_RS00960 PF05173 Dihydrodipicolinate reductase, C-terminus BD29_RS00965 PF05496 Holliday junction DNA helicase RuvB P-loop domain BD29_RS00965 PF12002 MgsA AAA+ ATPase C terminal BD29_RS00965 PF01661 Macro domain BD29_RS00965 PF16193 AAA C-terminal domain BD29_RS00990 PF03600 Citrate transporter BD29_RS00995 PF03169 OPT oligopeptide transporter protein BD29_RS01000 PF02673 Bacitracin resistance protein BacA BD29_RS01005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD29_RS01005 PF03129 Anticodon binding domain BD29_RS01005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD29_RS01010 PF05198 Translation initiation factor IF-3, N-terminal domain BD29_RS01010 PF00707 Translation initiation factor IF-3, C-terminal domain BD29_RS01020 PF02395 Immunoglobulin A1 protease BD29_RS01020 PF03797 Autotransporter beta-domain BD29_RS01045 PF02774 Semialdehyde dehydrogenase, dimerisation domain BD29_RS01045 PF01118 Semialdehyde dehydrogenase, NAD binding domain BD29_RS01055 PF00696 Amino acid kinase family BD29_RS01060 PF00202 Aminotransferase class-III BD29_RS01070 PF00132 Bacterial transferase hexapeptide (six repeats) BD29_RS01075 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BD29_RS01075 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BD29_RS01080 PF00268 Ribonucleotide reductase, small chain BD29_RS01090 PF00156 Phosphoribosyl transferase domain BD29_RS01095 PF01765 Ribosome recycling factor BD29_RS01100 PF03840 Preprotein translocase SecG subunit BD29_RS01105 PF01027 Inhibitor of apoptosis-promoting Bax1 BD29_RS01110 PF00484 Carbonic anhydrase BD29_RS01115 PF00924 Mechanosensitive ion channel BD29_RS01120 PF01592 NifU-like N terminal domain BD29_RS01120 PF04324 BFD-like [2Fe-2S] binding domain BD29_RS01120 PF01106 NifU-like domain BD29_RS01125 PF00266 Aminotransferase class-V BD29_RS01130 PF01814 Hemerythrin HHE cation binding domain BD29_RS01140 PF01632 Ribosomal protein L35 BD29_RS01145 PF00453 Ribosomal protein L20 BD29_RS01150 PF00672 HAMP domain BD29_RS01150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS01150 PF17202 Single cache domain 3 BD29_RS01175 PF00083 Sugar (and other) transporter BD29_RS01185 PF01967 MoaC family BD29_RS01190 PF04359 Protein of unknown function (DUF493) BD29_RS01200 PF03372 Endonuclease/Exonuclease/phosphatase family BD29_RS01205 PF08019 Phosphoethanolamine transferase EptA/EptB BD29_RS01205 PF00884 Sulfatase BD29_RS01210 PF01219 Prokaryotic diacylglycerol kinase BD29_RS01220 PF04909 Amidohydrolase BD29_RS01230 PF01209 ubiE/COQ5 methyltransferase family BD29_RS01235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS01235 PF00672 HAMP domain BD29_RS01235 PF02743 Cache domain BD29_RS01240 PF02535 ZIP Zinc transporter BD29_RS01245 PF00384 Molybdopterin oxidoreductase BD29_RS01245 PF18364 Molybdopterin oxidoreductase N-terminal domain BD29_RS01245 PF01568 Molydopterin dinucleotide binding domain BD29_RS01265 PF01145 SPFH domain / Band 7 family BD29_RS01270 PF01063 Amino-transferase class IV BD29_RS01275 PF01361 Tautomerase enzyme BD29_RS01280 PF00578 AhpC/TSA family BD29_RS01285 PF02677 Epoxyqueuosine reductase QueH BD29_RS01290 PF07977 FabA-like domain BD29_RS01295 PF00132 Bacterial transferase hexapeptide (six repeats) BD29_RS01295 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BD29_RS01300 PF10431 C-terminal, D2-small domain, of ClpB protein BD29_RS01300 PF06689 ClpX C4-type zinc finger BD29_RS01300 PF07724 AAA domain (Cdc48 subfamily) BD29_RS01315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD29_RS01315 PF02142 MGS-like domain BD29_RS01315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BD29_RS01325 PF00923 Transaldolase/Fructose-6-phosphate aldolase BD29_RS01335 PF01584 CheW-like domain BD29_RS01340 PF02895 Signal transducing histidine kinase, homodimeric domain BD29_RS01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD29_RS01340 PF01584 CheW-like domain BD29_RS01340 PF00072 Response regulator receiver domain BD29_RS01340 PF01627 Hpt domain BD29_RS01345 PF01584 CheW-like domain BD29_RS01345 PF00072 Response regulator receiver domain BD29_RS01355 PF03449 Transcription elongation factor, N-terminal BD29_RS01355 PF01272 Transcription elongation factor, GreA/GreB, C-term BD29_RS01360 PF02684 Lipid-A-disaccharide synthetase BD29_RS01375 PF01555 DNA methylase BD29_RS01390 PF07690 Major Facilitator Superfamily BD29_RS01395 PF01975 Survival protein SurE BD29_RS01405 PF13673 Acetyltransferase (GNAT) domain BD29_RS01410 PF02261 Aspartate decarboxylase BD29_RS01415 PF02569 Pantoate-beta-alanine ligase BD29_RS01420 PF02548 Ketopantoate hydroxymethyltransferase BD29_RS01425 PF00905 Penicillin binding protein transpeptidase domain BD29_RS01430 PF00005 ABC transporter BD29_RS01430 PF12857 TOBE-like domain BD29_RS01435 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS01455 PF04301 Protein of unknown function (DUF452) BD29_RS01460 PF00155 Aminotransferase class I and II BD29_RS01465 PF00202 Aminotransferase class-III BD29_RS01475 PF00893 Small Multidrug Resistance protein BD29_RS01485 PF01386 Ribosomal L25p family BD29_RS01485 PF14693 Ribosomal protein TL5, C-terminal domain BD29_RS01490 PF01195 Peptidyl-tRNA hydrolase BD29_RS01500 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BD29_RS01500 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BD29_RS01510 PF00800 Prephenate dehydratase BD29_RS01510 PF01817 Chorismate mutase type II BD29_RS01510 PF01842 ACT domain BD29_RS01515 PF00155 Aminotransferase class I and II BD29_RS01520 PF08345 Flagellar M-ring protein C-terminal BD29_RS01520 PF01514 Secretory protein of YscJ/FliF family BD29_RS01525 PF01706 FliG C-terminal domain BD29_RS01525 PF14842 FliG N-terminal domain BD29_RS01525 PF14841 FliG middle domain BD29_RS01535 PF02780 Transketolase, C-terminal domain BD29_RS01535 PF02779 Transketolase, pyrimidine binding domain BD29_RS01535 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BD29_RS01550 PF01209 ubiE/COQ5 methyltransferase family BD29_RS01555 PF13742 OB-fold nucleic acid binding domain BD29_RS01555 PF02601 Exonuclease VII, large subunit BD29_RS01560 PF00266 Aminotransferase class-V BD29_RS01565 PF01042 Endoribonuclease L-PSP BD29_RS01570 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BD29_RS01570 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BD29_RS01575 PF02504 Fatty acid synthesis protein BD29_RS01580 PF01783 Ribosomal L32p protein family BD29_RS01590 PF00334 Nucleoside diphosphate kinase BD29_RS01595 PF00037 4Fe-4S binding domain BD29_RS01600 PF10417 C-terminal domain of 1-Cys peroxiredoxin BD29_RS01600 PF00578 AhpC/TSA family BD29_RS01605 PF01312 FlhB HrpN YscU SpaS Family BD29_RS01610 PF00691 OmpA family BD29_RS01610 PF13677 Membrane MotB of proton-channel complex MotA/MotB BD29_RS01615 PF01618 MotA/TolQ/ExbB proton channel family BD29_RS01620 PF01367 5'-3' exonuclease, C-terminal SAM fold BD29_RS01620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BD29_RS01620 PF01612 3'-5' exonuclease BD29_RS01620 PF00476 DNA polymerase family A BD29_RS01625 PF07690 Major Facilitator Superfamily BD29_RS01625 PF00083 Sugar (and other) transporter BD29_RS01630 PF01156 Inosine-uridine preferring nucleoside hydrolase BD29_RS01640 PF17755 UvrA DNA-binding domain BD29_RS01640 PF17760 UvrA interaction domain BD29_RS01640 PF00005 ABC transporter BD29_RS01645 PF01925 Sulfite exporter TauE/SafE BD29_RS01655 PF00425 chorismate binding enzyme BD29_RS01655 PF04715 Anthranilate synthase component I, N terminal region BD29_RS01660 PF00591 Glycosyl transferase family, a/b domain BD29_RS01660 PF00117 Glutamine amidotransferase class-I BD29_RS01660 PF02885 Glycosyl transferase family, helical bundle domain BD29_RS01665 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BD29_RS01670 PF00291 Pyridoxal-phosphate dependent enzyme BD29_RS01675 PF00290 Tryptophan synthase alpha chain BD29_RS01685 PF04509 CheC-like family BD29_RS01685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BD29_RS01700 PF00037 4Fe-4S binding domain BD29_RS01705 PF00486 Transcriptional regulatory protein, C terminal BD29_RS01705 PF00072 Response regulator receiver domain BD29_RS01715 PF02660 Glycerol-3-phosphate acyltransferase BD29_RS01720 PF00034 Cytochrome c BD29_RS01720 PF03150 Di-haem cytochrome c peroxidase BD29_RS01725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BD29_RS01725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BD29_RS01725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BD29_RS01725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BD29_RS01730 PF01252 Signal peptidase (SPase) II BD29_RS01735 PF03653 Uncharacterised protein family (UPF0093) BD29_RS01740 PF06969 HemN C-terminal domain BD29_RS01740 PF04055 Radical SAM superfamily BD29_RS01750 PF02321 Outer membrane efflux protein BD29_RS01755 PF00873 AcrB/AcrD/AcrF family BD29_RS01760 PF00529 HlyD membrane-fusion protein of T1SS BD29_RS01760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BD29_RS01775 PF01165 Ribosomal protein S21 BD29_RS01790 PF03738 Glutathionylspermidine synthase preATP-grasp BD29_RS01795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD29_RS01795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD29_RS01800 PF04461 Protein of unknown function (DUF520) BD29_RS01815 PF01434 Peptidase family M41 BD29_RS01815 PF00004 ATPase family associated with various cellular activities (AAA) BD29_RS01815 PF17862 AAA+ lid domain BD29_RS01815 PF06480 FtsH Extracellular BD29_RS01820 PF01794 Ferric reductase like transmembrane component BD29_RS01825 PF00174 Oxidoreductase molybdopterin binding domain BD29_RS01830 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BD29_RS01835 PF01029 NusB family BD29_RS01840 PF00885 6,7-dimethyl-8-ribityllumazine synthase BD29_RS01845 PF00793 DAHP synthetase I family BD29_RS01855 PF01926 50S ribosome-binding GTPase BD29_RS01855 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BD29_RS01860 PF01202 Shikimate kinase BD29_RS01865 PF00579 tRNA synthetases class I (W and Y) BD29_RS01870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD29_RS01870 PF02403 Seryl-tRNA synthetase N-terminal domain BD29_RS01885 PF00391 PEP-utilising enzyme, mobile domain BD29_RS01885 PF00224 Pyruvate kinase, barrel domain BD29_RS01885 PF02887 Pyruvate kinase, alpha/beta domain BD29_RS01890 PF06039 Malate:quinone oxidoreductase (Mqo) BD29_RS01895 PF03309 Type III pantothenate kinase BD29_RS01905 PF15437 Plasminogen-binding protein pgbA C-terminal BD29_RS01915 PF02686 Glu-tRNAGln amidotransferase C subunit BD29_RS01925 PF01475 Ferric uptake regulator family BD29_RS01930 PF01336 OB-fold nucleic acid binding domain BD29_RS01930 PF00152 tRNA synthetases class II (D, K and N) BD29_RS01935 PF00464 Serine hydroxymethyltransferase BD29_RS01950 PF08501 Shikimate dehydrogenase substrate binding domain BD29_RS01960 PF01790 Prolipoprotein diacylglyceryl transferase BD29_RS01965 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BD29_RS01970 PF00890 FAD binding domain BD29_RS01970 PF02910 Fumarate reductase flavoprotein C-term BD29_RS01975 PF13183 4Fe-4S dicluster domain BD29_RS01975 PF13085 2Fe-2S iron-sulfur cluster binding domain BD29_RS01980 PF12631 MnmE helical domain BD29_RS01980 PF10396 GTP-binding protein TrmE N-terminus BD29_RS01980 PF01926 50S ribosome-binding GTPase BD29_RS02000 PF05199 GMC oxidoreductase BD29_RS02000 PF00732 GMC oxidoreductase BD29_RS02055 PF12848 ABC transporter BD29_RS02055 PF00005 ABC transporter BD29_RS02070 PF09186 Domain of unknown function (DUF1949) BD29_RS02070 PF01205 Uncharacterized protein family UPF0029 BD29_RS02110 PF08245 Mur ligase middle domain BD29_RS02115 PF00953 Glycosyl transferase family 4 BD29_RS02120 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BD29_RS02120 PF01676 Metalloenzyme superfamily BD29_RS02140 PF02910 Fumarate reductase flavoprotein C-term BD29_RS02140 PF00890 FAD binding domain BD29_RS02145 PF13085 2Fe-2S iron-sulfur cluster binding domain BD29_RS02145 PF13183 4Fe-4S dicluster domain BD29_RS02150 PF02754 Cysteine-rich domain BD29_RS02155 PF03070 TENA/THI-4/PQQC family BD29_RS02160 PF00550 Phosphopantetheine attachment site BD29_RS02165 PF02801 Beta-ketoacyl synthase, C-terminal domain BD29_RS02165 PF00109 Beta-ketoacyl synthase, N-terminal domain BD29_RS02170 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BD29_RS02175 PF00593 TonB dependent receptor BD29_RS02175 PF07715 TonB-dependent Receptor Plug Domain BD29_RS02180 PF00293 NUDIX domain BD29_RS02185 PF02743 Cache domain BD29_RS02185 PF00672 HAMP domain BD29_RS02185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS02195 PF00830 Ribosomal L28 family BD29_RS02200 PF00834 Ribulose-phosphate 3 epimerase family BD29_RS02205 PF11490 DNA polymerase III polC-type N-terminus II BD29_RS02205 PF14480 DNA polymerase III polC-type N-terminus I BD29_RS02205 PF00929 Exonuclease BD29_RS02205 PF02811 PHP domain BD29_RS02205 PF14579 Helix-hairpin-helix motif BD29_RS02205 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD29_RS02205 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD29_RS02210 PF01964 Radical SAM ThiC family BD29_RS02230 PF04028 Domain of unknown function (DUF374) BD29_RS02235 PF00919 Uncharacterized protein family UPF0004 BD29_RS02235 PF01938 TRAM domain BD29_RS02235 PF04055 Radical SAM superfamily BD29_RS02245 PF08529 NusA N-terminal domain BD29_RS02245 PF13184 NusA-like KH domain BD29_RS02255 PF04055 Radical SAM superfamily BD29_RS02260 PF05193 Peptidase M16 inactive domain BD29_RS02265 PF00271 Helicase conserved C-terminal domain BD29_RS02265 PF04851 Type III restriction enzyme, res subunit BD29_RS02270 PF01152 Bacterial-like globin BD29_RS02275 PF00027 Cyclic nucleotide-binding domain BD29_RS02280 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS02285 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS02290 PF00005 ABC transporter BD29_RS02315 PF00009 Elongation factor Tu GTP binding domain BD29_RS02315 PF03144 Elongation factor Tu domain 2 BD29_RS02315 PF03143 Elongation factor Tu C-terminal domain BD29_RS02320 PF00471 Ribosomal protein L33 BD29_RS02335 PF02357 Transcription termination factor nusG BD29_RS02340 PF03946 Ribosomal protein L11, N-terminal domain BD29_RS02340 PF00298 Ribosomal protein L11, RNA binding domain BD29_RS02345 PF00687 Ribosomal protein L1p/L10e family BD29_RS02350 PF00466 Ribosomal protein L10 BD29_RS02355 PF00542 Ribosomal protein L7/L12 C-terminal domain BD29_RS02355 PF16320 Ribosomal protein L7/L12 dimerisation domain BD29_RS02360 PF10385 RNA polymerase beta subunit external 1 domain BD29_RS02360 PF04561 RNA polymerase Rpb2, domain 2 BD29_RS02360 PF04565 RNA polymerase Rpb2, domain 3 BD29_RS02360 PF00562 RNA polymerase Rpb2, domain 6 BD29_RS02360 PF04563 RNA polymerase beta subunit BD29_RS02360 PF04560 RNA polymerase Rpb2, domain 7 BD29_RS02365 PF04997 RNA polymerase Rpb1, domain 1 BD29_RS02365 PF00623 RNA polymerase Rpb1, domain 2 BD29_RS02365 PF04983 RNA polymerase Rpb1, domain 3 BD29_RS02365 PF05000 RNA polymerase Rpb1, domain 4 BD29_RS02365 PF04998 RNA polymerase Rpb1, domain 5 BD29_RS02370 PF00164 Ribosomal protein S12/S23 BD29_RS02375 PF00177 Ribosomal protein S7p/S5e BD29_RS02380 PF00679 Elongation factor G C-terminus BD29_RS02380 PF00009 Elongation factor Tu GTP binding domain BD29_RS02380 PF14492 Elongation Factor G, domain II BD29_RS02380 PF03144 Elongation factor Tu domain 2 BD29_RS02380 PF03764 Elongation factor G, domain IV BD29_RS02410 PF00218 Indole-3-glycerol phosphate synthase BD29_RS02440 PF00762 Ferrochelatase BD29_RS02445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BD29_RS02445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BD29_RS02450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD29_RS02455 PF01411 tRNA synthetases class II (A) BD29_RS02455 PF02272 DHHA1 domain BD29_RS02455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BD29_RS02460 PF02545 Maf-like protein BD29_RS02465 PF17092 Penicillin-binding protein OB-like domain BD29_RS02465 PF00912 Transglycosylase BD29_RS02465 PF00905 Penicillin binding protein transpeptidase domain BD29_RS02470 PF10431 C-terminal, D2-small domain, of ClpB protein BD29_RS02470 PF00004 ATPase family associated with various cellular activities (AAA) BD29_RS02470 PF02861 Clp amino terminal domain, pathogenicity island component BD29_RS02470 PF07724 AAA domain (Cdc48 subfamily) BD29_RS02470 PF17871 AAA lid domain BD29_RS02475 PF02583 Metal-sensitive transcriptional repressor BD29_RS02480 PF03572 Peptidase family S41 BD29_RS02480 PF13180 PDZ domain BD29_RS02485 PF01259 SAICAR synthetase BD29_RS02490 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BD29_RS02505 PF01553 Acyltransferase BD29_RS02510 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BD29_RS02515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD29_RS02515 PF00183 Hsp90 protein BD29_RS02520 PF00581 Rhodanese-like domain BD29_RS02540 PF02049 Flagellar hook-basal body complex protein FliE BD29_RS02545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD29_RS02545 PF00460 Flagella basal body rod protein BD29_RS02550 PF00460 Flagella basal body rod protein BD29_RS02565 PF03971 Monomeric isocitrate dehydrogenase BD29_RS02570 PF00056 lactate/malate dehydrogenase, NAD binding domain BD29_RS02570 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BD29_RS02575 PF08442 ATP-grasp domain BD29_RS02575 PF00549 CoA-ligase BD29_RS02580 PF00549 CoA-ligase BD29_RS02580 PF02629 CoA binding domain BD29_RS02590 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BD29_RS02590 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BD29_RS02590 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BD29_RS02595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD29_RS02615 PF00348 Polyprenyl synthetase BD29_RS02620 PF01488 Shikimate / quinate 5-dehydrogenase BD29_RS02620 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BD29_RS02620 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BD29_RS02625 PF03129 Anticodon binding domain BD29_RS02625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BD29_RS02625 PF04073 Aminoacyl-tRNA editing domain BD29_RS02635 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BD29_RS02635 PF03900 Porphobilinogen deaminase, C-terminal domain BD29_RS02640 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BD29_RS02650 PF02465 Flagellar hook-associated protein 2 N-terminus BD29_RS02650 PF07196 Flagellin hook IN motif BD29_RS02650 PF07195 Flagellar hook-associated protein 2 C-terminus BD29_RS02655 PF02561 Flagellar protein FliS BD29_RS02670 PF09285 Elongation factor P, C-terminal BD29_RS02670 PF01132 Elongation factor P (EF-P) OB domain BD29_RS02670 PF08207 Elongation factor P (EF-P) KOW-like domain BD29_RS02705 PF00171 Aldehyde dehydrogenase family BD29_RS02710 PF07992 Pyridine nucleotide-disulphide oxidoreductase BD29_RS02725 PF00772 DnaB-like helicase N terminal domain BD29_RS02725 PF03796 DnaB-like helicase C terminal domain BD29_RS02780 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BD29_RS02780 PF00925 GTP cyclohydrolase II BD29_RS02785 PF09424 Yqey-like protein BD29_RS02790 PF00205 Thiamine pyrophosphate enzyme, central domain BD29_RS02790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BD29_RS02790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD29_RS02795 PF10369 Small subunit of acetolactate synthase BD29_RS02800 PF00132 Bacterial transferase hexapeptide (six repeats) BD29_RS02800 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BD29_RS02805 PF02547 Queuosine biosynthesis protein BD29_RS02810 PF00902 Sec-independent protein translocase protein (TatC) BD29_RS02815 PF02416 mttA/Hcf106 family BD29_RS02820 PF06969 HemN C-terminal domain BD29_RS02820 PF04055 Radical SAM superfamily BD29_RS02825 PF00293 NUDIX domain BD29_RS02830 PF00696 Amino acid kinase family BD29_RS02830 PF01842 ACT domain BD29_RS02830 PF13840 ACT domain BD29_RS02845 PF00809 Pterin binding enzyme BD29_RS02850 PF00533 BRCA1 C Terminus (BRCT) domain BD29_RS02850 PF01653 NAD-dependent DNA ligase adenylation domain BD29_RS02850 PF03120 NAD-dependent DNA ligase OB-fold domain BD29_RS02865 PF01687 Riboflavin kinase BD29_RS02865 PF06574 FAD synthetase BD29_RS02870 PF13847 Methyltransferase domain BD29_RS02885 PF03458 UPF0126 domain BD29_RS02895 PF10576 Iron-sulfur binding domain of endonuclease III BD29_RS02895 PF00633 Helix-hairpin-helix motif BD29_RS02895 PF00730 HhH-GPD superfamily base excision DNA repair protein BD29_RS02905 PF01116 Fructose-bisphosphate aldolase class-II BD29_RS02925 PF00209 Sodium:neurotransmitter symporter family BD29_RS02930 PF03475 3-alpha domain BD29_RS02930 PF03473 MOSC domain BD29_RS02935 PF11412 Disulphide bond corrector protein DsbC BD29_RS02935 PF02683 Cytochrome C biogenesis protein transmembrane region BD29_RS02935 PF00085 Thioredoxin BD29_RS02940 PF03976 Polyphosphate kinase 2 (PPK2) BD29_RS02945 PF01546 Peptidase family M20/M25/M40 BD29_RS02945 PF07687 Peptidase dimerisation domain BD29_RS02950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BD29_RS02955 PF12704 MacB-like periplasmic core domain BD29_RS02955 PF02687 FtsX-like permease family BD29_RS02955 PF00005 ABC transporter BD29_RS02960 PF02321 Outer membrane efflux protein BD29_RS02975 PF03062 MBOAT, membrane-bound O-acyltransferase family BD29_RS02980 PF00210 Ferritin-like domain BD29_RS02985 PF12849 PBP superfamily domain BD29_RS02990 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS02995 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS03000 PF00005 ABC transporter BD29_RS03010 PF01554 MatE BD29_RS03025 PF01300 Telomere recombination BD29_RS03025 PF17788 HypF Kae1-like domain BD29_RS03025 PF00708 Acylphosphatase BD29_RS03025 PF07503 HypF finger BD29_RS03030 PF02492 CobW/HypB/UreG, nucleotide-binding domain BD29_RS03035 PF01455 HupF/HypC family BD29_RS03040 PF01924 Hydrogenase formation hypA family BD29_RS03045 PF02769 AIR synthase related protein, C-terminal domain BD29_RS03045 PF00586 AIR synthase related protein, N-terminal domain BD29_RS03050 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BD29_RS03060 PF00773 RNB domain BD29_RS03065 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BD29_RS03065 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BD29_RS03075 PF17782 DprA winged helix domain BD29_RS03075 PF02481 DNA recombination-mediator protein A BD29_RS03080 PF03652 Holliday junction resolvase BD29_RS03085 PF01189 16S rRNA methyltransferase RsmB/F BD29_RS03085 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BD29_RS03085 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BD29_RS03090 PF01625 Peptide methionine sulfoxide reductase BD29_RS03095 PF00719 Inorganic pyrophosphatase BD29_RS03105 PF02938 GAD domain BD29_RS03105 PF00152 tRNA synthetases class II (D, K and N) BD29_RS03105 PF01336 OB-fold nucleic acid binding domain BD29_RS03110 PF01513 ATP-NAD kinase BD29_RS03115 PF13476 AAA domain BD29_RS03120 PF00990 Diguanylate cyclase, GGDEF domain BD29_RS03120 PF00072 Response regulator receiver domain BD29_RS03125 PF01026 TatD related DNase BD29_RS03130 PF01476 LysM domain BD29_RS03130 PF00877 NlpC/P60 family BD29_RS03135 PF05036 Sporulation related domain BD29_RS03135 PF03330 Lytic transglycolase BD29_RS03155 PF01926 50S ribosome-binding GTPase BD29_RS03165 PF03717 Penicillin-binding Protein dimerisation domain BD29_RS03165 PF00905 Penicillin binding protein transpeptidase domain BD29_RS03170 PF01321 Creatinase/Prolidase N-terminal domain BD29_RS03170 PF00557 Metallopeptidase family M24 BD29_RS03175 PF00854 POT family BD29_RS03180 PF00854 POT family BD29_RS03195 PF01926 50S ribosome-binding GTPase BD29_RS03195 PF07650 KH domain BD29_RS03200 PF07724 AAA domain (Cdc48 subfamily) BD29_RS03200 PF10431 C-terminal, D2-small domain, of ClpB protein BD29_RS03205 PF00227 Proteasome subunit BD29_RS03210 PF03948 Ribosomal protein L9, C-terminal domain BD29_RS03210 PF01281 Ribosomal protein L9, N-terminal domain BD29_RS03215 PF00764 Arginosuccinate synthase BD29_RS03220 PF01479 S4 domain BD29_RS03225 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BD29_RS03230 PF12399 Branched-chain amino acid ATP-binding cassette transporter BD29_RS03230 PF00005 ABC transporter BD29_RS03235 PF00309 Sigma-54 factor, Activator interacting domain (AID) BD29_RS03235 PF04963 Sigma-54 factor, core binding domain BD29_RS03235 PF04552 Sigma-54, DNA binding domain BD29_RS03240 PF03605 Anaerobic c4-dicarboxylate membrane transporter BD29_RS03250 PF03814 Potassium-transporting ATPase A subunit BD29_RS03260 PF02669 K+-transporting ATPase, c chain BD29_RS03265 PF13493 Domain of unknown function (DUF4118) BD29_RS03265 PF00512 His Kinase A (phospho-acceptor) domain BD29_RS03265 PF02702 Osmosensitive K+ channel His kinase sensor domain BD29_RS03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD29_RS03270 PF12344 Ultra-violet resistance protein B BD29_RS03270 PF02151 UvrB/uvrC motif BD29_RS03270 PF04851 Type III restriction enzyme, res subunit BD29_RS03270 PF00271 Helicase conserved C-terminal domain BD29_RS03270 PF17757 UvrB interaction domain BD29_RS03290 PF17764 3′ DNA-binding domain (3′BD) BD29_RS03290 PF00270 DEAD/DEAH box helicase BD29_RS03290 PF00271 Helicase conserved C-terminal domain BD29_RS03290 PF18074 Primosomal protein N C-terminal domain BD29_RS03290 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BD29_RS03295 PF00483 Nucleotidyl transferase BD29_RS03300 PF00117 Glutamine amidotransferase class-I BD29_RS03305 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BD29_RS03305 PF00391 PEP-utilising enzyme, mobile domain BD29_RS03310 PF01209 ubiE/COQ5 methyltransferase family BD29_RS03345 PF06114 IrrE N-terminal-like domain BD29_RS03385 PF04551 GcpE protein BD29_RS03390 PF02107 Flagellar L-ring protein BD29_RS03395 PF01515 Phosphate acetyl/butaryl transferase BD29_RS03400 PF00871 Acetokinase family BD29_RS03415 PF01795 MraW methylase family BD29_RS03420 PF13145 PPIC-type PPIASE domain BD29_RS03425 PF02491 SHS2 domain inserted in FTSA BD29_RS03430 PF00091 Tubulin/FtsZ family, GTPase domain BD29_RS03430 PF12327 FtsZ family, C-terminal domain BD29_RS03435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD29_RS03435 PF00460 Flagella basal body rod protein BD29_RS03440 PF00460 Flagella basal body rod protein BD29_RS03440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD29_RS03445 PF00120 Glutamine synthetase, catalytic domain BD29_RS03445 PF03951 Glutamine synthetase, beta-Grasp domain BD29_RS03455 PF01136 Peptidase family U32 BD29_RS03460 PF00731 AIR carboxylase BD29_RS03470 PF02091 Glycyl-tRNA synthetase alpha subunit BD29_RS03475 PF01784 NIF3 (NGG1p interacting factor 3) BD29_RS03485 PF02390 Putative methyltransferase BD29_RS03485 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BD29_RS03490 PF00849 RNA pseudouridylate synthase BD29_RS03495 PF00448 SRP54-type protein, GTPase domain BD29_RS03495 PF02978 Signal peptide binding domain BD29_RS03495 PF02881 SRP54-type protein, helical bundle domain BD29_RS03500 PF00886 Ribosomal protein S16 BD29_RS03510 PF05239 PRC-barrel domain BD29_RS03510 PF01782 RimM N-terminal domain BD29_RS03515 PF01746 tRNA (Guanine-1)-methyltransferase BD29_RS03520 PF01245 Ribosomal protein L19 BD29_RS03525 PF00576 HIUase/Transthyretin family BD29_RS03530 PF01474 Class-II DAHP synthetase family BD29_RS03535 PF03960 ArsC family BD29_RS03545 PF07733 Bacterial DNA polymerase III alpha NTPase domain BD29_RS03545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BD29_RS03545 PF02811 PHP domain BD29_RS03545 PF14579 Helix-hairpin-helix motif BD29_RS03550 PF01168 Alanine racemase, N-terminal domain BD29_RS03555 PF00669 Bacterial flagellin N-terminal helical region BD29_RS03565 PF05175 Methyltransferase small domain BD29_RS03565 PF17827 PrmC N-terminal domain BD29_RS03570 PF01435 Peptidase family M48 BD29_RS03580 PF00994 Probable molybdopterin binding domain BD29_RS03585 PF01544 CorA-like Mg2+ transporter protein BD29_RS03600 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD29_RS03640 PF01025 GrpE BD29_RS03645 PF00012 Hsp70 protein BD29_RS03655 PF12706 Beta-lactamase superfamily domain BD29_RS03665 PF00155 Aminotransferase class I and II BD29_RS03670 PF06426 Serine acetyltransferase, N-terminal BD29_RS03670 PF00132 Bacterial transferase hexapeptide (six repeats) BD29_RS03675 PF17810 Arginine decarboxylase helical bundle domain BD29_RS03675 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BD29_RS03675 PF17944 Arginine decarboxylase C-terminal helical extension BD29_RS03680 PF13393 Histidyl-tRNA synthetase BD29_RS03680 PF03129 Anticodon binding domain BD29_RS03685 PF02223 Thymidylate kinase BD29_RS03690 PF01467 Cytidylyltransferase-like BD29_RS03695 PF02441 Flavoprotein BD29_RS03705 PF03180 NLPA lipoprotein BD29_RS03710 PF03180 NLPA lipoprotein BD29_RS03715 PF03180 NLPA lipoprotein BD29_RS03720 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS03725 PF00005 ABC transporter BD29_RS03725 PF09383 NIL domain BD29_RS03730 PF00133 tRNA synthetases class I (I, L, M and V) BD29_RS03730 PF08264 Anticodon-binding domain of tRNA BD29_RS03730 PF10458 Valyl tRNA synthetase tRNA binding arm BD29_RS03740 PF00580 UvrD/REP helicase N-terminal domain BD29_RS03740 PF13361 UvrD-like helicase C-terminal domain BD29_RS03750 PF08534 Redoxin BD29_RS03755 PF00384 Molybdopterin oxidoreductase BD29_RS03755 PF01568 Molydopterin dinucleotide binding domain BD29_RS03755 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD29_RS03760 PF12838 4Fe-4S dicluster domain BD29_RS03760 PF12800 4Fe-4S binding domain BD29_RS03765 PF12801 4Fe-4S binding domain BD29_RS03765 PF13187 4Fe-4S dicluster domain BD29_RS03770 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BD29_RS03800 PF13735 tRNA nucleotidyltransferase domain 2 putative BD29_RS03800 PF12627 Probable RNA and SrmB- binding site of polymerase A BD29_RS03800 PF01743 Poly A polymerase head domain BD29_RS03805 PF00551 Formyl transferase BD29_RS03805 PF01842 ACT domain BD29_RS03810 PF00266 Aminotransferase class-V BD29_RS03820 PF00512 His Kinase A (phospho-acceptor) domain BD29_RS03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD29_RS03830 PF02875 Mur ligase family, glutamate ligase domain BD29_RS03830 PF08245 Mur ligase middle domain BD29_RS03845 PF07478 D-ala D-ala ligase C-terminus BD29_RS03845 PF01820 D-ala D-ala ligase N-terminus BD29_RS03850 PF01330 RuvA N terminal domain BD29_RS03850 PF07499 RuvA, C-terminal domain BD29_RS03860 PF03023 Lipid II flippase MurJ BD29_RS03865 PF09190 DALR domain BD29_RS03865 PF01406 tRNA synthetases class I (C) catalytic domain BD29_RS03870 PF00005 ABC transporter BD29_RS03870 PF00664 ABC transporter transmembrane region BD29_RS03875 PF01180 Dihydroorotate dehydrogenase BD29_RS03880 PF00675 Insulinase (Peptidase family M16) BD29_RS03880 PF05193 Peptidase M16 inactive domain BD29_RS03885 PF00701 Dihydrodipicolinate synthetase family BD29_RS03900 PF00753 Metallo-beta-lactamase superfamily BD29_RS03905 PF02540 NAD synthase BD29_RS03910 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BD29_RS03915 PF00291 Pyridoxal-phosphate dependent enzyme BD29_RS03920 PF02348 Cytidylyltransferase BD29_RS03930 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD29_RS03935 PF00813 FliP family BD29_RS03940 PF12804 MobA-like NTP transferase domain BD29_RS03940 PF00132 Bacterial transferase hexapeptide (six repeats) BD29_RS03945 PF04127 DNA / pantothenate metabolism flavoprotein BD29_RS03945 PF02441 Flavoprotein BD29_RS03955 PF01255 Putative undecaprenyl diphosphate synthase BD29_RS03970 PF01416 tRNA pseudouridine synthase BD29_RS03975 PF13291 ACT domain BD29_RS03975 PF00291 Pyridoxal-phosphate dependent enzyme BD29_RS03990 PF05958 tRNA (Uracil-5-)-methyltransferase BD29_RS03995 PF03553 Na+/H+ antiporter family BD29_RS04000 PF00106 short chain dehydrogenase BD29_RS04010 PF06434 Aconitate hydratase 2 N-terminus BD29_RS04010 PF00330 Aconitase family (aconitate hydratase) BD29_RS04010 PF11791 Aconitate B N-terminal domain BD29_RS04015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BD29_RS04015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BD29_RS04025 PF09334 tRNA synthetases class I (M) BD29_RS04025 PF01588 Putative tRNA binding domain BD29_RS04025 PF00133 tRNA synthetases class I (I, L, M and V) BD29_RS04035 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BD29_RS04060 PF00749 tRNA synthetases class I (E and Q), catalytic domain BD29_RS04065 PF00149 Calcineurin-like phosphoesterase BD29_RS04070 PF02666 Phosphatidylserine decarboxylase BD29_RS04075 PF01312 FlhB HrpN YscU SpaS Family BD29_RS04085 PF07690 Major Facilitator Superfamily BD29_RS04100 PF00202 Aminotransferase class-III BD29_RS04110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BD29_RS04110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BD29_RS04115 PF10502 Signal peptidase, peptidase S26 BD29_RS04120 PF03454 MoeA C-terminal region (domain IV) BD29_RS04120 PF03453 MoeA N-terminal region (domain I and II) BD29_RS04120 PF00994 Probable molybdopterin binding domain BD29_RS04125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BD29_RS04140 PF00591 Glycosyl transferase family, a/b domain BD29_RS04140 PF02885 Glycosyl transferase family, helical bundle domain BD29_RS04140 PF00117 Glutamine amidotransferase class-I BD29_RS04145 PF04715 Anthranilate synthase component I, N terminal region BD29_RS04145 PF00425 chorismate binding enzyme BD29_RS04150 PF00589 Phage integrase family BD29_RS04150 PF18644 Phage integrase SAM-like domain BD29_RS04155 PF01323 DSBA-like thioredoxin domain BD29_RS04160 PF02600 Disulfide bond formation protein DsbB BD29_RS04165 PF05935 Arylsulfotransferase (ASST) BD29_RS04165 PF17425 Arylsulfotransferase Ig-like domain BD29_RS04175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BD29_RS04205 PF00771 FHIPEP family BD29_RS04210 PF02082 Transcriptional regulator BD29_RS04215 PF00312 Ribosomal protein S15 BD29_RS04220 PF01580 FtsK/SpoIIIE family BD29_RS04220 PF09397 Ftsk gamma domain BD29_RS04220 PF17854 FtsK alpha domain BD29_RS04225 PF00669 Bacterial flagellin N-terminal helical region BD29_RS04225 PF00700 Bacterial flagellin C-terminal helical region BD29_RS04240 PF00005 ABC transporter BD29_RS04240 PF12848 ABC transporter BD29_RS04240 PF16326 ABC transporter C-terminal domain BD29_RS04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD29_RS04245 PF16736 Single Cache-like BD29_RS04245 PF00989 PAS fold BD29_RS04245 PF00512 His Kinase A (phospho-acceptor) domain BD29_RS04250 PF00072 Response regulator receiver domain BD29_RS04250 PF00486 Transcriptional regulatory protein, C terminal BD29_RS04255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BD29_RS04255 PF01842 ACT domain BD29_RS04255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BD29_RS04265 PF00575 S1 RNA binding domain BD29_RS04270 PF02401 LytB protein BD29_RS04275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BD29_RS04280 PF03483 B3/4 domain BD29_RS04280 PF01588 Putative tRNA binding domain BD29_RS04280 PF03147 Ferredoxin-fold anticodon binding domain BD29_RS04280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BD29_RS04280 PF03484 tRNA synthetase B5 domain BD29_RS04285 PF01409 tRNA synthetases class II core domain (F) BD29_RS04285 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BD29_RS04290 PF01230 HIT domain BD29_RS04305 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS04310 PF00005 ABC transporter BD29_RS04315 PF01235 Sodium:alanine symporter family BD29_RS04320 PF00588 SpoU rRNA Methylase family BD29_RS04325 PF01168 Alanine racemase, N-terminal domain BD29_RS04325 PF00842 Alanine racemase, C-terminal domain BD29_RS04350 PF02630 SCO1/SenC BD29_RS04355 PF00291 Pyridoxal-phosphate dependent enzyme BD29_RS04360 PF00216 Bacterial DNA-binding protein BD29_RS04370 PF03061 Thioesterase superfamily BD29_RS04380 PF13722 5TM C-terminal transporter carbon starvation CstA BD29_RS04380 PF02554 Carbon starvation protein CstA BD29_RS04385 PF14572 Phosphoribosyl synthetase-associated domain BD29_RS04385 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BD29_RS04390 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS04395 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS04400 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD29_RS04405 PF00005 ABC transporter BD29_RS04410 PF01739 CheR methyltransferase, SAM binding domain BD29_RS04415 PF01339 CheB methylesterase BD29_RS04415 PF00072 Response regulator receiver domain BD29_RS04420 PF02502 Ribose/Galactose Isomerase BD29_RS04430 PF00156 Phosphoribosyl transferase domain BD29_RS04440 PF00883 Cytosol aminopeptidase family, catalytic domain BD29_RS04445 PF06071 Protein of unknown function (DUF933) BD29_RS04445 PF01926 50S ribosome-binding GTPase BD29_RS04450 PF00206 Lyase BD29_RS04450 PF14698 Argininosuccinate lyase C-terminal BD29_RS04455 PF01293 Phosphoenolpyruvate carboxykinase BD29_RS04460 PF00364 Biotin-requiring enzyme BD29_RS04460 PF02436 Conserved carboxylase domain BD29_RS04460 PF00682 HMGL-like BD29_RS04465 PF00209 Sodium:neurotransmitter symporter family BD29_RS04470 PF00209 Sodium:neurotransmitter symporter family BD29_RS04475 PF00137 ATP synthase subunit C BD29_RS04520 PF01553 Acyltransferase BD29_RS04520 PF00501 AMP-binding enzyme BD29_RS04565 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS04570 PF02687 FtsX-like permease family BD29_RS04570 PF12704 MacB-like periplasmic core domain BD29_RS04575 PF02810 SEC-C motif BD29_RS04575 PF07517 SecA DEAD-like domain BD29_RS04575 PF01043 SecA preprotein cross-linking domain BD29_RS04575 PF07516 SecA Wing and Scaffold domain BD29_RS04580 PF03548 Outer membrane lipoprotein carrier protein LolA BD29_RS04590 PF02689 Helicase BD29_RS04590 PF05970 PIF1-like helicase BD29_RS04600 PF00795 Carbon-nitrogen hydrolase BD29_RS04605 PF16916 Dimerisation domain of Zinc Transporter BD29_RS04605 PF01545 Cation efflux family BD29_RS04610 PF04371 Porphyromonas-type peptidyl-arginine deiminase BD29_RS04620 PF00672 HAMP domain BD29_RS04620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS04625 PF01808 AICARFT/IMPCHase bienzyme BD29_RS04625 PF02142 MGS-like domain BD29_RS04630 PF00226 DnaJ domain BD29_RS04630 PF05099 Tellurite resistance protein TerB BD29_RS04635 PF00586 AIR synthase related protein, N-terminal domain BD29_RS04635 PF02769 AIR synthase related protein, C-terminal domain BD29_RS04635 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BD29_RS04640 PF10396 GTP-binding protein TrmE N-terminus BD29_RS04640 PF01926 50S ribosome-binding GTPase BD29_RS04640 PF12631 MnmE helical domain BD29_RS04650 PF02096 60Kd inner membrane protein BD29_RS04650 PF14849 YidC periplasmic domain BD29_RS04655 PF01809 Putative membrane protein insertion efficiency factor BD29_RS04660 PF00825 Ribonuclease P BD29_RS04665 PF00468 Ribosomal protein L34 BD29_RS04685 PF03061 Thioesterase superfamily BD29_RS04710 PF01814 Hemerythrin HHE cation binding domain BD29_RS04720 PF08003 Protein of unknown function (DUF1698) BD29_RS04735 PF00565 Staphylococcal nuclease homologue BD29_RS04740 PF01546 Peptidase family M20/M25/M40 BD29_RS04740 PF07687 Peptidase dimerisation domain BD29_RS04745 PF08946 Osmosensory transporter coiled coil BD29_RS04745 PF00083 Sugar (and other) transporter BD29_RS04750 PF00497 Bacterial extracellular solute-binding proteins, family 3 BD29_RS04755 PF16668 Adhesin from Campylobacter BD29_RS04760 PF03883 Peroxide stress protein YaaA BD29_RS04765 PF07687 Peptidase dimerisation domain BD29_RS04765 PF01546 Peptidase family M20/M25/M40 BD29_RS04770 PF07690 Major Facilitator Superfamily BD29_RS04785 PF17437 Family of unknown function (DUF5416) BD29_RS04790 PF02665 Nitrate reductase gamma subunit BD29_RS04790 PF13183 4Fe-4S dicluster domain BD29_RS04790 PF02754 Cysteine-rich domain BD29_RS04795 PF06969 HemN C-terminal domain BD29_RS04795 PF04055 Radical SAM superfamily BD29_RS04800 PF10788 Protein of unknown function (DUF2603) BD29_RS04805 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BD29_RS04805 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BD29_RS04810 PF00490 Delta-aminolevulinic acid dehydratase BD29_RS04815 PF00925 GTP cyclohydrolase II BD29_RS04820 PF02527 rRNA small subunit methyltransferase G BD29_RS04830 PF03601 Conserved hypothetical protein 698 BD29_RS04835 PF03466 LysR substrate binding domain BD29_RS04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BD29_RS04840 PF04542 Sigma-70 region 2 BD29_RS04840 PF04545 Sigma-70, region 4 BD29_RS04840 PF04539 Sigma-70 region 3 BD29_RS04840 PF00140 Sigma-70 factor, region 1.2 BD29_RS04860 PF01434 Peptidase family M41 BD29_RS04860 PF17862 AAA+ lid domain BD29_RS04860 PF00004 ATPase family associated with various cellular activities (AAA) BD29_RS04860 PF06480 FtsH Extracellular BD29_RS04865 PF00919 Uncharacterized protein family UPF0004 BD29_RS04865 PF04055 Radical SAM superfamily BD29_RS04875 PF01761 3-dehydroquinate synthase BD29_RS04885 PF01702 Queuine tRNA-ribosyltransferase BD29_RS04905 PF01578 Cytochrome C assembly protein BD29_RS04905 PF05140 ResB-like family BD29_RS04910 PF00005 ABC transporter BD29_RS04915 PF12399 Branched-chain amino acid ATP-binding cassette transporter BD29_RS04915 PF00005 ABC transporter BD29_RS04920 PF11862 Domain of unknown function (DUF3382) BD29_RS04920 PF02653 Branched-chain amino acid transport system / permease component BD29_RS04925 PF02653 Branched-chain amino acid transport system / permease component BD29_RS04930 PF13458 Periplasmic binding protein BD29_RS04935 PF13458 Periplasmic binding protein BD29_RS04955 PF02774 Semialdehyde dehydrogenase, dimerisation domain BD29_RS04955 PF01118 Semialdehyde dehydrogenase, NAD binding domain BD29_RS04960 PF00072 Response regulator receiver domain BD29_RS04960 PF00158 Sigma-54 interaction domain BD29_RS04975 PF00521 DNA gyrase/topoisomerase IV, subunit A BD29_RS04975 PF03989 DNA gyrase C-terminal domain, beta-propeller BD29_RS04990 PF06421 GTP-binding protein LepA C-terminus BD29_RS04990 PF00679 Elongation factor G C-terminus BD29_RS04990 PF03144 Elongation factor Tu domain 2 BD29_RS04990 PF00009 Elongation factor Tu GTP binding domain BD29_RS05000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BD29_RS05000 PF00529 HlyD membrane-fusion protein of T1SS BD29_RS05005 PF00873 AcrB/AcrD/AcrF family BD29_RS05015 PF04377 Arginine-tRNA-protein transferase, C terminus BD29_RS05015 PF04376 Arginine-tRNA-protein transferase, N terminus BD29_RS05025 PF02785 Biotin carboxylase C-terminal domain BD29_RS05025 PF00289 Biotin carboxylase, N-terminal domain BD29_RS05025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD29_RS05030 PF01098 Cell cycle protein BD29_RS05035 PF03033 Glycosyltransferase family 28 N-terminal domain BD29_RS05035 PF04101 Glycosyltransferase family 28 C-terminal domain BD29_RS05050 PF12833 Helix-turn-helix domain BD29_RS05055 PF02581 Thiamine monophosphate synthase BD29_RS05060 PF06968 Biotin and Thiamin Synthesis associated domain BD29_RS05060 PF04055 Radical SAM superfamily BD29_RS05065 PF05690 Thiazole biosynthesis protein ThiG BD29_RS05070 PF00899 ThiF family BD29_RS05070 PF00581 Rhodanese-like domain BD29_RS05100 PF01546 Peptidase family M20/M25/M40 BD29_RS05100 PF07687 Peptidase dimerisation domain BD29_RS05110 PF02146 Sir2 family BD29_RS05120 PF00488 MutS domain V BD29_RS05120 PF01713 Smr domain BD29_RS05130 PF01225 Mur ligase family, catalytic domain BD29_RS05130 PF08245 Mur ligase middle domain BD29_RS05130 PF02875 Mur ligase family, glutamate ligase domain BD29_RS05150 PF00478 IMP dehydrogenase / GMP reductase domain BD29_RS05150 PF00571 CBS domain BD29_RS05155 PF01425 Amidase BD29_RS05165 PF08264 Anticodon-binding domain of tRNA BD29_RS05165 PF00133 tRNA synthetases class I (I, L, M and V) BD29_RS05170 PF00994 Probable molybdopterin binding domain BD29_RS05170 PF02464 Competence-damaged protein BD29_RS05175 PF00583 Acetyltransferase (GNAT) family BD29_RS05180 PF00881 Nitroreductase family BD29_RS05185 PF00881 Nitroreductase family BD29_RS05190 PF01066 CDP-alcohol phosphatidyltransferase BD29_RS05195 PF02163 Peptidase family M50 BD29_RS05195 PF17820 PDZ domain BD29_RS05200 PF04393 Protein of unknown function (DUF535) BD29_RS05205 PF01250 Ribosomal protein S6 BD29_RS05210 PF00436 Single-strand binding protein family BD29_RS05215 PF01084 Ribosomal protein S18 BD29_RS05220 PF02190 ATP-dependent protease La (LON) substrate-binding domain BD29_RS05220 PF05362 Lon protease (S16) C-terminal proteolytic domain BD29_RS05220 PF00004 ATPase family associated with various cellular activities (AAA) BD29_RS05230 PF02623 FliW protein BD29_RS05235 PF03807 NADP oxidoreductase coenzyme F420-dependent BD29_RS05235 PF14748 Pyrroline-5-carboxylate reductase dimerisation BD29_RS05260 PF02581 Thiamine monophosphate synthase BD29_RS05265 PF08543 Phosphomethylpyrimidine kinase BD29_RS05280 PF03461 TRCF domain BD29_RS05280 PF00271 Helicase conserved C-terminal domain BD29_RS05280 PF00270 DEAD/DEAH box helicase BD29_RS05280 PF02559 CarD-like/TRCF domain BD29_RS05280 PF17757 UvrB interaction domain BD29_RS05290 PF01551 Peptidase family M23 BD29_RS05290 PF04225 Opacity-associated protein A LysM-like domain BD29_RS05295 PF08245 Mur ligase middle domain BD29_RS05295 PF02875 Mur ligase family, glutamate ligase domain BD29_RS05310 PF13603 Leucyl-tRNA synthetase, Domain 2 BD29_RS05310 PF09334 tRNA synthetases class I (M) BD29_RS05310 PF00133 tRNA synthetases class I (I, L, M and V) BD29_RS05315 PF02355 Protein export membrane protein BD29_RS05315 PF07549 SecD/SecF GG Motif BD29_RS05320 PF02355 Protein export membrane protein BD29_RS05325 PF02699 Preprotein translocase subunit BD29_RS05335 PF02772 S-adenosylmethionine synthetase, central domain BD29_RS05335 PF00438 S-adenosylmethionine synthetase, N-terminal domain BD29_RS05335 PF02773 S-adenosylmethionine synthetase, C-terminal domain BD29_RS05340 PF00375 Sodium:dicarboxylate symporter family BD29_RS05345 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BD29_RS05345 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BD29_RS05350 PF08439 Oligopeptidase F BD29_RS05350 PF01432 Peptidase family M3 BD29_RS05360 PF13361 UvrD-like helicase C-terminal domain BD29_RS05360 PF00580 UvrD/REP helicase N-terminal domain BD29_RS05365 PF01509 TruB family pseudouridylate synthase (N terminal domain) BD29_RS05370 PF02599 Global regulator protein family BD29_RS05375 PF00288 GHMP kinases N terminal domain BD29_RS05380 PF01668 SmpB protein BD29_RS05390 PF02617 ATP-dependent Clp protease adaptor protein ClpS BD29_RS05395 PF10431 C-terminal, D2-small domain, of ClpB protein BD29_RS05395 PF02861 Clp amino terminal domain, pathogenicity island component BD29_RS05395 PF17871 AAA lid domain BD29_RS05395 PF07724 AAA domain (Cdc48 subfamily) BD29_RS05395 PF00004 ATPase family associated with various cellular activities (AAA) BD29_RS05400 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BD29_RS05405 PF08447 PAS fold BD29_RS05405 PF13426 PAS domain BD29_RS05405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS05410 PF01914 MarC family integral membrane protein BD29_RS05415 PF01641 SelR domain BD29_RS05420 PF04305 Protein of unknown function (DUF455) BD29_RS05425 PF01066 CDP-alcohol phosphatidyltransferase BD29_RS05435 PF01434 Peptidase family M41 BD29_RS05435 PF00004 ATPase family associated with various cellular activities (AAA) BD29_RS05435 PF17862 AAA+ lid domain BD29_RS05445 PF00072 Response regulator receiver domain BD29_RS05455 PF02719 Polysaccharide biosynthesis protein BD29_RS05460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD29_RS05465 PF17836 PglD N-terminal domain BD29_RS05465 PF00132 Bacterial transferase hexapeptide (six repeats) BD29_RS05470 PF02397 Bacterial sugar transferase BD29_RS05475 PF13477 Glycosyl transferase 4-like BD29_RS05475 PF00534 Glycosyl transferases group 1 BD29_RS05480 PF02516 Oligosaccharyl transferase STT3 subunit BD29_RS05480 PF18527 STT3/PglB C-terminal beta-barrel domain BD29_RS05485 PF00534 Glycosyl transferases group 1 BD29_RS05485 PF13439 Glycosyltransferase Family 4 BD29_RS05490 PF00535 Glycosyl transferase family 2 BD29_RS05495 PF13439 Glycosyltransferase Family 4 BD29_RS05495 PF00534 Glycosyl transferases group 1 BD29_RS05500 PF00664 ABC transporter transmembrane region BD29_RS05500 PF00005 ABC transporter BD29_RS05505 PF16363 GDP-mannose 4,6 dehydratase BD29_RS05515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BD29_RS05520 PF03279 Bacterial lipid A biosynthesis acyltransferase BD29_RS05530 PF00534 Glycosyl transferases group 1 BD29_RS05535 PF00535 Glycosyl transferase family 2 BD29_RS05540 PF00535 Glycosyl transferase family 2 BD29_RS05540 PF01501 Glycosyl transferase family 8 BD29_RS05555 PF00535 Glycosyl transferase family 2 BD29_RS05565 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) BD29_RS05570 PF13580 SIS domain BD29_RS05575 PF00294 pfkB family carbohydrate kinase BD29_RS05575 PF01467 Cytidylyltransferase-like BD29_RS05580 PF01370 NAD dependent epimerase/dehydratase family BD29_RS05585 PF08645 Polynucleotide kinase 3 phosphatase BD29_RS05600 PF00403 Heavy-metal-associated domain BD29_RS05605 PF07498 Rho termination factor, N-terminal domain BD29_RS05605 PF07497 Rho termination factor, RNA-binding domain BD29_RS05605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BD29_RS05610 PF12170 DNA polymerase III tau subunit V interacting with alpha BD29_RS05610 PF12169 DNA polymerase III subunits gamma and tau domain III BD29_RS05620 PF00403 Heavy-metal-associated domain BD29_RS05640 PF06738 Putative threonine/serine exporter BD29_RS05640 PF12821 Threonine/Serine exporter, ThrE BD29_RS05650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BD29_RS05650 PF00056 lactate/malate dehydrogenase, NAD binding domain BD29_RS05655 PF09335 SNARE associated Golgi protein BD29_RS05670 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BD29_RS05675 PF01709 Transcriptional regulator BD29_RS05680 PF00893 Small Multidrug Resistance protein BD29_RS05685 PF00893 Small Multidrug Resistance protein BD29_RS05690 PF05746 DALR anticodon binding domain BD29_RS05690 PF03485 Arginyl tRNA synthetase N terminal domain BD29_RS05690 PF00750 tRNA synthetases class I (R) BD29_RS05695 PF02416 mttA/Hcf106 family BD29_RS05700 PF00625 Guanylate kinase BD29_RS05710 PF01311 Bacterial export proteins, family 1 BD29_RS05715 PF00005 ABC transporter BD29_RS05720 PF00889 Elongation factor TS BD29_RS05725 PF00318 Ribosomal protein S2 BD29_RS05740 PF00032 Cytochrome b(C-terminal)/b6/petD BD29_RS05740 PF00033 Cytochrome b/b6/petB BD29_RS05745 PF00355 Rieske [2Fe-2S] domain BD29_RS05745 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BD29_RS05755 PF01134 Glucose inhibited division protein A BD29_RS05755 PF13932 GidA associated domain BD29_RS05765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS05765 PF13426 PAS domain BD29_RS05765 PF08447 PAS fold BD29_RS05775 PF00375 Sodium:dicarboxylate symporter family BD29_RS05785 PF01384 Phosphate transporter family BD29_RS05790 PF01979 Amidohydrolase family BD29_RS05795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BD29_RS05795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BD29_RS05800 PF02637 GatB domain BD29_RS05800 PF02934 GatB/GatE catalytic domain BD29_RS05805 PF02664 S-Ribosylhomocysteinase (LuxS) BD29_RS05820 PF03180 NLPA lipoprotein BD29_RS05825 PF08267 Cobalamin-independent synthase, N-terminal domain BD29_RS05825 PF01717 Cobalamin-independent synthase, Catalytic domain BD29_RS05830 PF02219 Methylenetetrahydrofolate reductase BD29_RS05840 PF00119 ATP synthase A chain BD29_RS05845 PF18073 Rubredoxin metal binding domain BD29_RS05850 PF00448 SRP54-type protein, GTPase domain BD29_RS05865 PF12072 Domain of unknown function (DUF3552) BD29_RS05865 PF01966 HD domain BD29_RS05880 PF03631 Virulence factor BrkB BD29_RS05885 PF02913 FAD linked oxidases, C-terminal domain BD29_RS05885 PF01565 FAD binding domain BD29_RS05895 PF01476 LysM domain BD29_RS05895 PF01551 Peptidase family M23 BD29_RS05895 PF08525 Opacity-associated protein A N-terminal motif BD29_RS05905 PF02578 Multi-copper polyphenol oxidoreductase laccase BD29_RS05910 PF00677 Lumazine binding domain BD29_RS05920 PF00166 Chaperonin 10 Kd subunit BD29_RS05925 PF00118 TCP-1/cpn60 chaperonin family BD29_RS05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD29_RS05935 PF00486 Transcriptional regulatory protein, C terminal BD29_RS05935 PF00072 Response regulator receiver domain BD29_RS05940 PF01814 Hemerythrin HHE cation binding domain BD29_RS05960 PF00486 Transcriptional regulatory protein, C terminal BD29_RS05960 PF00072 Response regulator receiver domain BD29_RS05965 PF00595 PDZ domain BD29_RS05970 PF01556 DnaJ C terminal domain BD29_RS05970 PF00226 DnaJ domain BD29_RS05975 PF13411 MerR HTH family regulatory protein BD29_RS05980 PF00999 Sodium/hydrogen exchanger family BD29_RS05980 PF02254 TrkA-N domain BD29_RS05990 PF13419 Haloacid dehalogenase-like hydrolase BD29_RS05995 PF02092 Glycyl-tRNA synthetase beta subunit BD29_RS06000 PF01551 Peptidase family M23 BD29_RS06010 PF02541 Ppx/GppA phosphatase family BD29_RS06015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BD29_RS06020 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BD29_RS06030 PF07690 Major Facilitator Superfamily BD29_RS06040 PF01208 Uroporphyrinogen decarboxylase (URO-D) BD29_RS06045 PF04055 Radical SAM superfamily BD29_RS06055 PF01541 GIY-YIG catalytic domain BD29_RS06055 PF02151 UvrB/uvrC motif BD29_RS06055 PF08459 UvrC Helix-hairpin-helix N-terminal BD29_RS06065 PF00117 Glutamine amidotransferase class-I BD29_RS06065 PF00958 GMP synthase C terminal domain BD29_RS06065 PF02540 NAD synthase BD29_RS06075 PF02843 Phosphoribosylglycinamide synthetase, C domain BD29_RS06075 PF02844 Phosphoribosylglycinamide synthetase, N domain BD29_RS06075 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BD29_RS06090 PF00575 S1 RNA binding domain BD29_RS06090 PF01138 3' exoribonuclease family, domain 1 BD29_RS06090 PF03725 3' exoribonuclease family, domain 2 BD29_RS06090 PF00013 KH domain BD29_RS06090 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BD29_RS06105 PF07690 Major Facilitator Superfamily BD29_RS06110 PF01451 Low molecular weight phosphotyrosine protein phosphatase BD29_RS06115 PF05538 Campylobacter major outer membrane protein BD29_RS06120 PF01556 DnaJ C terminal domain BD29_RS06120 PF00226 DnaJ domain BD29_RS06120 PF00684 DnaJ central domain BD29_RS06125 PF00072 Response regulator receiver domain BD29_RS06125 PF00486 Transcriptional regulatory protein, C terminal BD29_RS06135 PF02132 RecR protein BD29_RS06135 PF13662 Toprim domain BD29_RS06140 PF01750 Hydrogenase maturation protease BD29_RS06145 PF01292 Prokaryotic cytochrome b561 BD29_RS06150 PF00374 Nickel-dependent hydrogenase BD29_RS06155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BD29_RS06155 PF10518 TAT (twin-arginine translocation) pathway signal sequence BD29_RS06155 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BD29_RS06160 PF01266 FAD dependent oxidoreductase BD29_RS06160 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BD29_RS06165 PF01520 N-acetylmuramoyl-L-alanine amidase BD29_RS06165 PF11741 AMIN domain BD29_RS06175 PF00579 tRNA synthetases class I (W and Y) BD29_RS06180 PF13291 ACT domain BD29_RS06180 PF04607 Region found in RelA / SpoT proteins BD29_RS06180 PF02824 TGS domain BD29_RS06185 PF01192 RNA polymerase Rpb6 BD29_RS06190 PF00696 Amino acid kinase family BD29_RS06205 PF00005 ABC transporter BD29_RS06205 PF09383 NIL domain BD29_RS06210 PF02390 Putative methyltransferase BD29_RS06220 PF00849 RNA pseudouridylate synthase BD29_RS06220 PF01479 S4 domain BD29_RS06225 PF01098 Cell cycle protein BD29_RS06240 PF02386 Cation transport protein BD29_RS06245 PF02254 TrkA-N domain BD29_RS06245 PF02080 TrkA-C domain BD29_RS06250 PF02621 Menaquinone biosynthesis BD29_RS06260 PF00390 Malic enzyme, N-terminal domain BD29_RS06260 PF01515 Phosphate acetyl/butaryl transferase BD29_RS06260 PF03949 Malic enzyme, NAD binding domain BD29_RS06265 PF00749 tRNA synthetases class I (E and Q), catalytic domain BD29_RS06275 PF00289 Biotin carboxylase, N-terminal domain BD29_RS06275 PF02785 Biotin carboxylase C-terminal domain BD29_RS06275 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BD29_RS06280 PF00364 Biotin-requiring enzyme BD29_RS06285 PF00692 dUTPase BD29_RS06290 PF02719 Polysaccharide biosynthesis protein BD29_RS06295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD29_RS06330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BD29_RS06330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BD29_RS06345 PF02348 Cytidylyltransferase BD29_RS06355 PF13302 Acetyltransferase (GNAT) domain BD29_RS06360 PF00977 Histidine biosynthesis protein BD29_RS06365 PF00117 Glutamine amidotransferase class-I BD29_RS06375 PF03102 NeuB family BD29_RS06375 PF08666 SAF domain BD29_RS06380 PF16363 GDP-mannose 4,6 dehydratase BD29_RS06385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BD29_RS06415 PF08666 SAF domain BD29_RS06415 PF03102 NeuB family BD29_RS06420 PF02350 UDP-N-acetylglucosamine 2-epimerase BD29_RS06425 PF00483 Nucleotidyl transferase BD29_RS06435 PF02348 Cytidylyltransferase BD29_RS06465 PF07196 Flagellin hook IN motif BD29_RS06465 PF00700 Bacterial flagellin C-terminal helical region BD29_RS06465 PF00669 Bacterial flagellin N-terminal helical region BD29_RS06470 PF00700 Bacterial flagellin C-terminal helical region BD29_RS06470 PF07196 Flagellin hook IN motif BD29_RS06470 PF00669 Bacterial flagellin N-terminal helical region BD29_RS06490 PF08334 Type II secretion system (T2SS), protein G BD29_RS06490 PF07963 Prokaryotic N-terminal methylation motif BD29_RS06495 PF00814 Glycoprotease family BD29_RS06505 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BD29_RS06505 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BD29_RS06505 PF13288 DXP reductoisomerase C-terminal domain BD29_RS06520 PF05670 NFACT protein RNA binding domain BD29_RS06525 PF12804 MobA-like NTP transferase domain BD29_RS06530 PF02253 Phospholipase A1 BD29_RS06535 PF01032 FecCD transport family BD29_RS06540 PF01032 FecCD transport family BD29_RS06545 PF00005 ABC transporter BD29_RS06550 PF01497 Periplasmic binding protein BD29_RS06575 PF02335 Cytochrome c552 BD29_RS06580 PF03264 NapC/NirT cytochrome c family, N-terminal region BD29_RS06585 PF02503 Polyphosphate kinase middle domain BD29_RS06585 PF13090 Polyphosphate kinase C-terminal domain 2 BD29_RS06585 PF17941 Polyphosphate kinase C-terminal domain 1 BD29_RS06585 PF13089 Polyphosphate kinase N-terminal domain BD29_RS06605 PF17864 RuvB AAA lid domain BD29_RS06605 PF05491 RuvB C-terminal winged helix domain BD29_RS06605 PF05496 Holliday junction DNA helicase RuvB P-loop domain BD29_RS06610 PF01594 AI-2E family transporter BD29_RS06615 PF10415 Fumarase C C-terminus BD29_RS06615 PF00206 Lyase BD29_RS06620 PF12951 Passenger-associated-transport-repeat BD29_RS06620 PF03797 Autotransporter beta-domain BD29_RS06620 PF00082 Subtilase family BD29_RS06625 PF01380 SIS domain BD29_RS06635 PF04055 Radical SAM superfamily BD29_RS06640 PF00860 Permease family BD29_RS06645 PF00156 Phosphoribosyl transferase domain BD29_RS06650 PF04333 MlaA lipoprotein BD29_RS06665 PF01725 Ham1 family BD29_RS06670 PF07690 Major Facilitator Superfamily BD29_RS06680 PF03841 L-seryl-tRNA selenium transferase BD29_RS06685 PF09107 Elongation factor SelB, winged helix BD29_RS06685 PF09106 Elongation factor SelB, winged helix BD29_RS06685 PF00009 Elongation factor Tu GTP binding domain BD29_RS06685 PF03144 Elongation factor Tu domain 2 BD29_RS06690 PF13098 Thioredoxin-like domain BD29_RS06700 PF00258 Flavodoxin BD29_RS06715 PF00199 Catalase BD29_RS06715 PF06628 Catalase-related immune-responsive BD29_RS06725 PF13309 HTH domain BD29_RS06725 PF08348 YheO-like PAS domain BD29_RS06730 PF01042 Endoribonuclease L-PSP BD29_RS06735 PF03606 C4-dicarboxylate anaerobic carrier BD29_RS06740 PF01053 Cys/Met metabolism PLP-dependent enzyme BD29_RS06745 PF00206 Lyase BD29_RS06745 PF10397 Adenylosuccinate lyase C-terminus BD29_RS06755 PF04023 FeoA domain BD29_RS06760 PF07664 Ferrous iron transport protein B C terminus BD29_RS06760 PF02421 Ferrous iron transport protein B BD29_RS06760 PF07670 Nucleoside recognition BD29_RS06765 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BD29_RS06765 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BD29_RS06765 PF10518 TAT (twin-arginine translocation) pathway signal sequence BD29_RS06775 PF00121 Triosephosphate isomerase BD29_RS06780 PF00162 Phosphoglycerate kinase BD29_RS06785 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BD29_RS06785 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BD29_RS06790 PF01467 Cytidylyltransferase-like BD29_RS06805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BD29_RS06805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BD29_RS06805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BD29_RS06805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BD29_RS06810 PF03748 Flagellar basal body-associated protein FliL BD29_RS06815 PF01648 4'-phosphopantetheinyl transferase superfamily BD29_RS06825 PF00067 Cytochrome P450 BD29_RS06835 PF05159 Capsule polysaccharide biosynthesis protein BD29_RS06840 PF05159 Capsule polysaccharide biosynthesis protein BD29_RS06850 PF00391 PEP-utilising enzyme, mobile domain BD29_RS06850 PF00224 Pyruvate kinase, barrel domain BD29_RS06850 PF02887 Pyruvate kinase, alpha/beta domain BD29_RS06855 PF01747 ATP-sulfurylase BD29_RS06855 PF14306 PUA-like domain BD29_RS06870 PF00483 Nucleotidyl transferase BD29_RS06875 PF13580 SIS domain BD29_RS06880 PF00288 GHMP kinases N terminal domain BD29_RS06880 PF08544 GHMP kinases C terminal BD29_RS06885 PF16363 GDP-mannose 4,6 dehydratase BD29_RS06890 PF01370 NAD dependent epimerase/dehydratase family BD29_RS06895 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BD29_RS06915 PF03275 UDP-galactopyranose mutase BD29_RS06920 PF16363 GDP-mannose 4,6 dehydratase BD29_RS06925 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BD29_RS06925 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BD29_RS06925 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BD29_RS06930 PF16363 GDP-mannose 4,6 dehydratase BD29_RS06935 PF01501 Glycosyl transferase family 8 BD29_RS06935 PF00535 Glycosyl transferase family 2 BD29_RS06940 PF00535 Glycosyl transferase family 2 BD29_RS06940 PF01501 Glycosyl transferase family 8 BD29_RS06950 PF00571 CBS domain BD29_RS06950 PF01380 SIS domain BD29_RS06955 PF02563 Polysaccharide biosynthesis/export protein BD29_RS06955 PF10531 SLBB domain BD29_RS06965 PF00005 ABC transporter BD29_RS06970 PF01061 ABC-2 type transporter BD29_RS06995 PF01171 PP-loop family BD29_RS07000 PF04055 Radical SAM superfamily BD29_RS07000 PF00919 Uncharacterized protein family UPF0004 BD29_RS07005 PF03462 PCRF domain BD29_RS07005 PF00472 RF-1 domain BD29_RS07015 PF01142 tRNA pseudouridine synthase D (TruD) BD29_RS07020 PF02769 AIR synthase related protein, C-terminal domain BD29_RS07020 PF00586 AIR synthase related protein, N-terminal domain BD29_RS07040 PF02119 Flagellar P-ring protein BD29_RS07060 PF07196 Flagellin hook IN motif BD29_RS07060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD29_RS07070 PF01925 Sulfite exporter TauE/SafE BD29_RS07075 PF00482 Type II secretion system (T2SS), protein F BD29_RS07080 PF00437 Type II/IV secretion system protein BD29_RS07095 PF07655 Secretin N-terminal domain BD29_RS07095 PF00263 Bacterial type II and III secretion system protein BD29_RS07105 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BD29_RS07105 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BD29_RS07105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BD29_RS07105 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BD29_RS07105 PF10371 Domain of unknown function BD29_RS07110 PF13419 Haloacid dehalogenase-like hydrolase BD29_RS07115 PF00691 OmpA family BD29_RS07115 PF05736 OprF membrane domain BD29_RS07120 PF00380 Ribosomal protein S9/S16 BD29_RS07125 PF00572 Ribosomal protein L13 BD29_RS07130 PF13361 UvrD-like helicase C-terminal domain BD29_RS07130 PF00580 UvrD/REP helicase N-terminal domain BD29_RS07135 PF12705 PD-(D/E)XK nuclease superfamily BD29_RS07160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BD29_RS07160 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BD29_RS07175 PF00115 Cytochrome C and Quinol oxidase polypeptide I BD29_RS07180 PF00486 Transcriptional regulatory protein, C terminal BD29_RS07180 PF00072 Response regulator receiver domain BD29_RS07185 PF08448 PAS fold BD29_RS07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BD29_RS07185 PF08447 PAS fold BD29_RS07195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BD29_RS07195 PF00117 Glutamine amidotransferase class-I BD29_RS07215 PF00709 Adenylosuccinate synthetase BD29_RS07225 PF04143 Sulphur transport BD29_RS07230 PF01206 Sulfurtransferase TusA BD29_RS07235 PF00474 Sodium:solute symporter family BD29_RS07240 PF01619 Proline dehydrogenase BD29_RS07240 PF14850 DNA-binding domain of Proline dehydrogenase BD29_RS07240 PF00171 Aldehyde dehydrogenase family BD29_RS07240 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BD29_RS07245 PF02769 AIR synthase related protein, C-terminal domain BD29_RS07245 PF00586 AIR synthase related protein, N-terminal domain BD29_RS07255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS07255 PF13426 PAS domain BD29_RS07255 PF08447 PAS fold BD29_RS07265 PF02634 FdhD/NarQ family BD29_RS07275 PF13247 4Fe-4S dicluster domain BD29_RS07295 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BD29_RS07300 PF07732 Multicopper oxidase BD29_RS07300 PF07731 Multicopper oxidase BD29_RS07310 PF02391 MoaE protein BD29_RS07315 PF00994 Probable molybdopterin binding domain BD29_RS07315 PF03453 MoeA N-terminal region (domain I and II) BD29_RS07315 PF03454 MoeA C-terminal region (domain IV) BD29_RS07320 PF09827 CRISPR associated protein Cas2 BD29_RS07325 PF01867 CRISPR associated protein Cas1 BD29_RS07330 PF13395 HNH endonuclease BD29_RS07330 PF18541 RuvC endonuclease subdomain 3 BD29_RS07340 PF00586 AIR synthase related protein, N-terminal domain BD29_RS07340 PF02769 AIR synthase related protein, C-terminal domain BD29_RS07345 PF01121 Dephospho-CoA kinase BD29_RS07350 PF01678 Diaminopimelate epimerase BD29_RS07355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BD29_RS07365 PF00210 Ferritin-like domain BD29_RS07370 PF00342 Phosphoglucose isomerase BD29_RS07375 PF00483 Nucleotidyl transferase BD29_RS07380 PF16177 Acetyl-coenzyme A synthetase N-terminus BD29_RS07380 PF13193 AMP-binding enzyme C-terminal domain BD29_RS07380 PF00501 AMP-binding enzyme BD29_RS07385 PF00005 ABC transporter BD29_RS07390 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS07395 PF12849 PBP superfamily domain BD29_RS07400 PF03746 LamB/YcsF family BD29_RS07405 PF02682 Carboxyltransferase domain, subdomain C and D BD29_RS07410 PF02626 Carboxyltransferase domain, subdomain A and B BD29_RS07420 PF02525 Flavodoxin-like fold BD29_RS07425 PF01638 HxlR-like helix-turn-helix BD29_RS07435 PF08240 Alcohol dehydrogenase GroES-like domain BD29_RS07435 PF00107 Zinc-binding dehydrogenase BD29_RS07440 PF04851 Type III restriction enzyme, res subunit BD29_RS07440 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BD29_RS07440 PF00271 Helicase conserved C-terminal domain BD29_RS07440 PF08463 EcoEI R protein C-terminal BD29_RS07455 PF01420 Type I restriction modification DNA specificity domain BD29_RS07460 PF12161 HsdM N-terminal domain BD29_RS07460 PF02384 N-6 DNA Methylase BD29_RS07475 PF07690 Major Facilitator Superfamily BD29_RS07480 PF03773 Predicted permease BD29_RS07485 PF01022 Bacterial regulatory protein, arsR family BD29_RS07495 PF01758 Sodium Bile acid symporter family BD29_RS07505 PF02743 Cache domain BD29_RS07505 PF00672 HAMP domain BD29_RS07505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BD29_RS07515 PF00361 Proton-conducting membrane transporter BD29_RS07520 PF00361 Proton-conducting membrane transporter BD29_RS07525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BD29_RS07525 PF00361 Proton-conducting membrane transporter BD29_RS07530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BD29_RS07535 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BD29_RS07540 PF12838 4Fe-4S dicluster domain BD29_RS07545 PF00146 NADH dehydrogenase BD29_RS07550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BD29_RS07550 PF12838 4Fe-4S dicluster domain BD29_RS07550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BD29_RS07550 PF01568 Molydopterin dinucleotide binding domain BD29_RS07550 PF00384 Molybdopterin oxidoreductase BD29_RS07565 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BD29_RS07570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BD29_RS07575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BD29_RS07580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BD29_RS07585 PF00005 ABC transporter BD29_RS07590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BD29_RS07590 PF00005 ABC transporter BD29_RS07595 PF12911 N-terminal TM domain of oligopeptide transport permease C BD29_RS07595 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS07600 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS07605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BD29_RS07615 PF12800 4Fe-4S binding domain BD29_RS07615 PF13247 4Fe-4S dicluster domain BD29_RS07630 PF00970 Oxidoreductase FAD-binding domain BD29_RS07630 PF00042 Globin BD29_RS07630 PF00175 Oxidoreductase NAD-binding domain BD29_RS07635 PF00005 ABC transporter BD29_RS07640 PF07690 Major Facilitator Superfamily BD29_RS07650 PF01176 Translation initiation factor 1A / IF-1 BD29_RS07655 PF00444 Ribosomal protein L36 BD29_RS07660 PF00416 Ribosomal protein S13/S18 BD29_RS07665 PF00411 Ribosomal protein S11 BD29_RS07670 PF01479 S4 domain BD29_RS07670 PF00163 Ribosomal protein S4/S9 N-terminal domain BD29_RS07675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BD29_RS07675 PF01000 RNA polymerase Rpb3/RpoA insert domain BD29_RS07675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BD29_RS07680 PF01196 Ribosomal protein L17 BD29_RS07685 PF01634 ATP phosphoribosyltransferase BD29_RS07685 PF08029 HisG, C-terminal domain BD29_RS07690 PF00815 Histidinol dehydrogenase BD29_RS07695 PF08645 Polynucleotide kinase 3 phosphatase BD29_RS07695 PF00475 Imidazoleglycerol-phosphate dehydratase BD29_RS07700 PF00117 Glutamine amidotransferase class-I BD29_RS07705 PF00977 Histidine biosynthesis protein BD29_RS07715 PF00977 Histidine biosynthesis protein BD29_RS07720 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BD29_RS07720 PF01502 Phosphoribosyl-AMP cyclohydrolase BD29_RS07725 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BD29_RS07725 PF14602 Hexapeptide repeat of succinyl-transferase BD29_RS07730 PF10609 NUBPL iron-transfer P-loop NTPase BD29_RS07730 PF01883 Iron-sulfur cluster assembly protein BD29_RS07735 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BD29_RS07735 PF02542 YgbB family BD29_RS07740 PF00072 Response regulator receiver domain BD29_RS07740 PF00486 Transcriptional regulatory protein, C terminal BD29_RS07745 PF01747 ATP-sulfurylase BD29_RS07745 PF14306 PUA-like domain BD29_RS07750 PF04608 Phosphatidylglycerophosphatase A BD29_RS07755 PF01649 Ribosomal protein S20 BD29_RS07760 PF03462 PCRF domain BD29_RS07760 PF00472 RF-1 domain BD29_RS07765 PF01243 Pyridoxamine 5'-phosphate oxidase BD29_RS07765 PF10615 Protein of unknown function (DUF2470) BD29_RS07770 PF07715 TonB-dependent Receptor Plug Domain BD29_RS07770 PF00593 TonB dependent receptor BD29_RS07775 PF01032 FecCD transport family BD29_RS07780 PF00005 ABC transporter BD29_RS07785 PF01497 Periplasmic binding protein BD29_RS07795 PF00083 Sugar (and other) transporter BD29_RS07800 PF00730 HhH-GPD superfamily base excision DNA repair protein BD29_RS07800 PF14815 NUDIX domain BD29_RS07830 PF01872 RibD C-terminal domain BD29_RS07830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BD29_RS07840 PF03315 Serine dehydratase beta chain BD29_RS07840 PF03313 Serine dehydratase alpha chain BD29_RS07860 PF01618 MotA/TolQ/ExbB proton channel family BD29_RS07865 PF02472 Biopolymer transport protein ExbD/TolR BD29_RS07890 PF01264 Chorismate synthase BD29_RS07895 PF00035 Double-stranded RNA binding motif BD29_RS07895 PF14622 Ribonuclease-III-like BD29_RS07900 PF00075 RNase H BD29_RS07910 PF08275 DNA primase catalytic core, N-terminal domain BD29_RS07910 PF01807 CHC2 zinc finger BD29_RS07925 PF08245 Mur ligase middle domain BD29_RS07925 PF02875 Mur ligase family, glutamate ligase domain BD29_RS07930 PF02575 YbaB/EbfC DNA-binding family BD29_RS07940 PF00348 Polyprenyl synthetase BD29_RS07945 PF00456 Transketolase, thiamine diphosphate binding domain BD29_RS07945 PF02779 Transketolase, pyrimidine binding domain BD29_RS07945 PF02780 Transketolase, C-terminal domain BD29_RS07950 PF02405 Permease MlaE BD29_RS07955 PF00005 ABC transporter BD29_RS07965 PF02470 MlaD protein BD29_RS07965 PF03886 ABC-type transport auxiliary lipoprotein component BD29_RS07975 PF00557 Metallopeptidase family M24 BD29_RS07980 PF01177 Asp/Glu/Hydantoin racemase BD29_RS07985 PF00877 NlpC/P60 family BD29_RS07990 PF06965 Na+/H+ antiporter 1 BD29_RS07995 PF06965 Na+/H+ antiporter 1 BD29_RS08010 PF03239 Iron permease FTR1 family BD29_RS08015 PF10634 Fe2+ transport protein BD29_RS08035 PF00005 ABC transporter BD29_RS08085 PF01068 ATP dependent DNA ligase domain BD29_RS08085 PF14743 DNA ligase OB-like domain BD29_RS08100 PF00113 Enolase, C-terminal TIM barrel domain BD29_RS08100 PF03952 Enolase, N-terminal domain BD29_RS08105 PF00154 recA bacterial DNA recombination protein BD29_RS08110 PF02621 Menaquinone biosynthesis BD29_RS08115 PF01313 Bacterial export proteins, family 3 BD29_RS08120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BD29_RS08130 PF00459 Inositol monophosphatase family BD29_RS08135 PF00285 Citrate synthase, C-terminal domain BD29_RS08145 PF06968 Biotin and Thiamin Synthesis associated domain BD29_RS08145 PF04055 Radical SAM superfamily BD29_RS08150 PF01396 Topoisomerase DNA binding C4 zinc finger BD29_RS08150 PF01131 DNA topoisomerase BD29_RS08150 PF01751 Toprim domain BD29_RS08160 PF00005 ABC transporter BD29_RS08160 PF17912 MalK OB fold domain BD29_RS08165 PF00528 Binding-protein-dependent transport system inner membrane component BD29_RS08180 PF01547 Bacterial extracellular solute-binding protein BD29_RS08190 PF00149 Calcineurin-like phosphoesterase BD29_RS08195 PF00344 SecY translocase BD29_RS08200 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BD29_RS08205 PF00333 Ribosomal protein S5, N-terminal domain BD29_RS08205 PF03719 Ribosomal protein S5, C-terminal domain BD29_RS08210 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BD29_RS08215 PF00347 Ribosomal protein L6 BD29_RS08220 PF00410 Ribosomal protein S8 BD29_RS08225 PF00253 Ribosomal protein S14p/S29e BD29_RS08230 PF00673 ribosomal L5P family C-terminus BD29_RS08230 PF00281 Ribosomal protein L5 BD29_RS08235 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BD29_RS08235 PF00467 KOW motif BD29_RS08240 PF00238 Ribosomal protein L14p/L23e BD29_RS08245 PF00366 Ribosomal protein S17 BD29_RS08250 PF00831 Ribosomal L29 protein BD29_RS08255 PF00252 Ribosomal protein L16p/L10e BD29_RS08260 PF00189 Ribosomal protein S3, C-terminal domain BD29_RS08260 PF07650 KH domain BD29_RS08265 PF00237 Ribosomal protein L22p/L17e BD29_RS08270 PF00203 Ribosomal protein S19 BD29_RS08275 PF03947 Ribosomal Proteins L2, C-terminal domain BD29_RS08275 PF00181 Ribosomal Proteins L2, RNA binding domain BD29_RS08280 PF00276 Ribosomal protein L23 BD29_RS08285 PF00573 Ribosomal protein L4/L1 family BD29_RS08290 PF00297 Ribosomal protein L3 BD29_RS08295 PF00338 Ribosomal protein S10p/S20e BD29_RS08300 PF00849 RNA pseudouridylate synthase BD29_RS08300 PF01479 S4 domain BD29_RS08305 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BD29_RS08305 PF17770 Ribonuclease J C-terminal domain BD29_RS08305 PF00753 Metallo-beta-lactamase superfamily BD29_RS08310 PF00398 Ribosomal RNA adenine dimethylase BD29_RS08320 PF04055 Radical SAM superfamily BD29_RS08345 PF05686 Glycosyl transferase family 90 BD29_RS08365 PF00694 Aconitase C-terminal domain BD29_RS08370 PF00330 Aconitase family (aconitate hydratase) BD29_RS08375 PF00180 Isocitrate/isopropylmalate dehydrogenase BD29_RS08380 PF08502 LeuA allosteric (dimerisation) domain BD29_RS08380 PF00682 HMGL-like BD29_RS08395 PF14489 QueF-like protein BD29_RS08400 PF07559 Flagellar basal body protein FlaE BD29_RS08400 PF07196 Flagellin hook IN motif BD29_RS08400 PF00460 Flagella basal body rod protein BD29_RS08400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BD29_RS08405 PF02075 Crossover junction endodeoxyribonuclease RuvC