locus-tag class description PJ16_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix PJ16_RS00005 PF00308 Bacterial dnaA protein PJ16_RS00005 PF11638 DnaA N-terminal domain PJ16_RS00010 PF02767 DNA polymerase III beta subunit, central domain PJ16_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PJ16_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PJ16_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ16_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus PJ16_RS00015 PF00204 DNA gyrase B PJ16_RS00015 PF01751 Toprim domain PJ16_RS00030 PF03553 Na+/H+ antiporter family PJ16_RS00030 PF13726 Na+-H+ antiporter family PJ16_RS00035 PF04898 Glutamate synthase central domain PJ16_RS00035 PF01645 Conserved region in glutamate synthase PJ16_RS00035 PF01493 GXGXG motif PJ16_RS00035 PF00310 Glutamine amidotransferases class-II PJ16_RS00045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PJ16_RS00045 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJ16_RS00050 PF01351 Ribonuclease HII PJ16_RS00060 PF02915 Rubrerythrin PJ16_RS00065 PF00920 Dehydratase family PJ16_RS00070 PF07274 Protein of unknown function (DUF1440) PJ16_RS00080 PF06508 Queuosine biosynthesis protein QueC PJ16_RS00095 PF12729 Four helix bundle sensory module for signal transduction PJ16_RS00095 PF00672 HAMP domain PJ16_RS00095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ16_RS00100 PF00034 Cytochrome c PJ16_RS00100 PF03150 Di-haem cytochrome c peroxidase PJ16_RS00105 PF01557 Fumarylacetoacetate (FAA) hydrolase family PJ16_RS00110 PF00849 RNA pseudouridylate synthase PJ16_RS00115 PF00206 Lyase PJ16_RS00115 PF10397 Adenylosuccinate lyase C-terminus PJ16_RS00120 PF03477 ATP cone domain PJ16_RS00120 PF00317 Ribonucleotide reductase, all-alpha domain PJ16_RS00120 PF02867 Ribonucleotide reductase, barrel domain PJ16_RS00125 PF00375 Sodium:dicarboxylate symporter family PJ16_RS00130 PF02511 Thymidylate synthase complementing protein PJ16_RS00135 PF06418 CTP synthase N-terminus PJ16_RS00135 PF00117 Glutamine amidotransferase class-I PJ16_RS00140 PF17768 RecJ OB domain PJ16_RS00140 PF01368 DHH family PJ16_RS00140 PF02272 DHHA1 domain PJ16_RS00145 PF00710 Asparaginase, N-terminal PJ16_RS00145 PF17763 Glutaminase/Asparaginase C-terminal domain PJ16_RS00195 PF07690 Major Facilitator Superfamily PJ16_RS00215 PF00009 Elongation factor Tu GTP binding domain PJ16_RS00215 PF03144 Elongation factor Tu domain 2 PJ16_RS00215 PF00679 Elongation factor G C-terminus PJ16_RS00230 PF03963 Flagellar hook capping protein - N-terminal region PJ16_RS00235 PF00460 Flagella basal body rod protein PJ16_RS00235 PF07559 Flagellar basal body protein FlaE PJ16_RS00235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ16_RS00255 PF00939 Sodium:sulfate symporter transmembrane region PJ16_RS00270 PF00939 Sodium:sulfate symporter transmembrane region PJ16_RS00310 PF04509 CheC-like family PJ16_RS00310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PJ16_RS00315 PF02154 Flagellar motor switch protein FliM PJ16_RS00315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PJ16_RS00320 PF04545 Sigma-70, region 4 PJ16_RS00320 PF04539 Sigma-70 region 3 PJ16_RS00320 PF04542 Sigma-70 region 2 PJ16_RS00330 PF10609 NUBPL iron-transfer P-loop NTPase PJ16_RS00335 PF00448 SRP54-type protein, GTPase domain PJ16_RS00340 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PJ16_RS00345 PF01220 Dehydroquinase class II PJ16_RS00350 PF01979 Amidohydrolase family PJ16_RS00355 PF01343 Peptidase family S49 PJ16_RS00375 PF01814 Hemerythrin HHE cation binding domain PJ16_RS00385 PF11870 Domain of unknown function (DUF3390) PJ16_RS00385 PF02589 LUD domain PJ16_RS00385 PF13183 4Fe-4S dicluster domain PJ16_RS00390 PF02754 Cysteine-rich domain PJ16_RS00395 PF02652 L-lactate permease PJ16_RS00400 PF03498 Cytolethal distending toxin A/C domain PJ16_RS00405 PF03372 Endonuclease/Exonuclease/phosphatase family PJ16_RS00410 PF03498 Cytolethal distending toxin A/C domain PJ16_RS00420 PF01654 Cytochrome bd terminal oxidase subunit I PJ16_RS00425 PF02322 Cytochrome bd terminal oxidase subunit II PJ16_RS00435 PF01177 Asp/Glu/Hydantoin racemase PJ16_RS00440 PF03167 Uracil DNA glycosylase superfamily PJ16_RS00445 PF00206 Lyase PJ16_RS00445 PF10415 Fumarase C C-terminus PJ16_RS00450 PF03605 Anaerobic c4-dicarboxylate membrane transporter PJ16_RS00480 PF00829 Ribosomal prokaryotic L21 protein PJ16_RS00485 PF01016 Ribosomal L27 protein PJ16_RS00490 PF01018 GTP1/OBG PJ16_RS00490 PF01926 50S ribosome-binding GTPase PJ16_RS00495 PF00696 Amino acid kinase family PJ16_RS00500 PF02911 Formyl transferase, C-terminal domain PJ16_RS00500 PF00551 Formyl transferase PJ16_RS00505 PF03099 Biotin/lipoate A/B protein ligase family PJ16_RS00505 PF08279 HTH domain PJ16_RS00505 PF02237 Biotin protein ligase C terminal domain PJ16_RS00510 PF13614 AAA domain PJ16_RS00515 PF02195 ParB-like nuclease domain PJ16_RS00515 PF17762 HTH domain found in ParB protein PJ16_RS00525 PF00430 ATP synthase B/B' CF(0) PJ16_RS00530 PF00213 ATP synthase delta (OSCP) subunit PJ16_RS00535 PF02874 ATP synthase alpha/beta family, beta-barrel domain PJ16_RS00535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PJ16_RS00535 PF00306 ATP synthase alpha/beta chain, C terminal domain PJ16_RS00540 PF00231 ATP synthase PJ16_RS00545 PF02874 ATP synthase alpha/beta family, beta-barrel domain PJ16_RS00545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PJ16_RS00550 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PJ16_RS00555 PF01618 MotA/TolQ/ExbB proton channel family PJ16_RS00560 PF02472 Biopolymer transport protein ExbD/TolR PJ16_RS00575 PF00691 OmpA family PJ16_RS00575 PF00223 Photosystem I psaA/psaB protein PJ16_RS00585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PJ16_RS00590 PF00698 Acyl transferase domain PJ16_RS00595 PF01048 Phosphorylase superfamily PJ16_RS00600 PF01171 PP-loop family PJ16_RS00615 PF02130 Uncharacterized protein family UPF0054 PJ16_RS00625 PF01207 Dihydrouridine synthase (Dus) PJ16_RS00635 PF01258 Prokaryotic dksA/traR C4-type zinc finger PJ16_RS00640 PF02590 Predicted SPOUT methyltransferase PJ16_RS00645 PF01039 Carboxyl transferase domain PJ16_RS00645 PF17848 Acetyl-coA carboxylase zinc finger domain PJ16_RS00650 PF00459 Inositol monophosphatase family PJ16_RS00655 PF01103 Surface antigen PJ16_RS00655 PF07244 Surface antigen variable number repeat PJ16_RS00670 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PJ16_RS00680 PF00288 GHMP kinases N terminal domain PJ16_RS00690 PF00009 Elongation factor Tu GTP binding domain PJ16_RS00690 PF11987 Translation-initiation factor 2 PJ16_RS00690 PF04760 Translation initiation factor IF-2, N-terminal region PJ16_RS00695 PF02033 Ribosome-binding factor A PJ16_RS00700 PF17384 RimP C-terminal SH3 domain PJ16_RS00700 PF02576 RimP N-terminal domain PJ16_RS00705 PF07728 AAA domain (dynein-related subfamily) PJ16_RS00705 PF12102 Domain of unknown function (DUF3578) PJ16_RS00715 PF00950 ABC 3 transport family PJ16_RS00720 PF00005 ABC transporter PJ16_RS00730 PF02743 Cache domain PJ16_RS00730 PF00672 HAMP domain PJ16_RS00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ16_RS00740 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJ16_RS00745 PF00085 Thioredoxin PJ16_RS00750 PF02021 Uncharacterised protein family UPF0102 PJ16_RS00755 PF01842 ACT domain PJ16_RS00755 PF03447 Homoserine dehydrogenase, NAD binding domain PJ16_RS00755 PF00742 Homoserine dehydrogenase PJ16_RS00760 PF00155 Aminotransferase class I and II PJ16_RS00775 PF00588 SpoU rRNA Methylase family PJ16_RS00775 PF08032 RNA 2'-O ribose methyltransferase substrate binding PJ16_RS00780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJ16_RS00785 PF01197 Ribosomal protein L31 PJ16_RS00790 PF04452 RNA methyltransferase PJ16_RS00815 PF04055 Radical SAM superfamily PJ16_RS00815 PF06463 Molybdenum Cofactor Synthesis C PJ16_RS00840 PF02659 Putative manganese efflux pump PJ16_RS00855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PJ16_RS00855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PJ16_RS00865 PF16653 Saccharopine dehydrogenase C-terminal domain PJ16_RS00865 PF03435 Saccharopine dehydrogenase NADP binding domain PJ16_RS00870 PF08402 TOBE domain PJ16_RS00870 PF00005 ABC transporter PJ16_RS00880 PF13416 Bacterial extracellular solute-binding protein PJ16_RS00895 PF07715 TonB-dependent Receptor Plug Domain PJ16_RS00895 PF00593 TonB dependent receptor PJ16_RS00900 PF01618 MotA/TolQ/ExbB proton channel family PJ16_RS00905 PF02472 Biopolymer transport protein ExbD/TolR PJ16_RS00915 PF05992 SbmA/BacA-like family PJ16_RS00920 PF00571 CBS domain PJ16_RS00920 PF03471 Transporter associated domain PJ16_RS00920 PF01595 Cyclin M transmembrane N-terminal domain PJ16_RS00930 PF03831 PhnA domain PJ16_RS00930 PF08274 PhnA Zinc-Ribbon PJ16_RS00935 PF03741 Integral membrane protein TerC family PJ16_RS00940 PF00551 Formyl transferase PJ16_RS00945 PF01256 Carbohydrate kinase PJ16_RS00945 PF03853 YjeF-related protein N-terminus PJ16_RS00955 PF01078 Magnesium chelatase, subunit ChlI PJ16_RS00955 PF13335 Magnesium chelatase, subunit ChlI C-terminal PJ16_RS00960 PF01327 Polypeptide deformylase PJ16_RS00965 PF00574 Clp protease PJ16_RS00970 PF05698 Bacterial trigger factor protein (TF) C-terminus PJ16_RS00970 PF05697 Bacterial trigger factor protein (TF) PJ16_RS00970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PJ16_RS00975 PF01227 GTP cyclohydrolase I PJ16_RS00980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PJ16_RS00980 PF18269 T3SS EscN ATPase C-terminal domain PJ16_RS00985 PF00156 Phosphoribosyl transferase domain PJ16_RS00990 PF05173 Dihydrodipicolinate reductase, C-terminus PJ16_RS00990 PF01113 Dihydrodipicolinate reductase, N-terminus PJ16_RS00995 PF16193 AAA C-terminal domain PJ16_RS00995 PF05496 Holliday junction DNA helicase RuvB P-loop domain PJ16_RS00995 PF12002 MgsA AAA+ ATPase C terminal PJ16_RS00995 PF01661 Macro domain PJ16_RS01015 PF03169 OPT oligopeptide transporter protein PJ16_RS01020 PF02673 Bacitracin resistance protein BacA PJ16_RS01025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PJ16_RS01025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PJ16_RS01025 PF03129 Anticodon binding domain PJ16_RS01030 PF00707 Translation initiation factor IF-3, C-terminal domain PJ16_RS01030 PF05198 Translation initiation factor IF-3, N-terminal domain PJ16_RS01065 PF01118 Semialdehyde dehydrogenase, NAD binding domain PJ16_RS01065 PF02774 Semialdehyde dehydrogenase, dimerisation domain PJ16_RS01075 PF00696 Amino acid kinase family PJ16_RS01080 PF00202 Aminotransferase class-III PJ16_RS01090 PF00132 Bacterial transferase hexapeptide (six repeats) PJ16_RS01095 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PJ16_RS01095 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PJ16_RS01100 PF00268 Ribonucleotide reductase, small chain PJ16_RS01110 PF00156 Phosphoribosyl transferase domain PJ16_RS01115 PF01765 Ribosome recycling factor PJ16_RS01120 PF03840 Preprotein translocase SecG subunit PJ16_RS01125 PF01027 Inhibitor of apoptosis-promoting Bax1 PJ16_RS01130 PF00484 Carbonic anhydrase PJ16_RS01135 PF00924 Mechanosensitive ion channel PJ16_RS01140 PF01106 NifU-like domain PJ16_RS01140 PF04324 BFD-like [2Fe-2S] binding domain PJ16_RS01140 PF01592 NifU-like N terminal domain PJ16_RS01145 PF00266 Aminotransferase class-V PJ16_RS01150 PF01814 Hemerythrin HHE cation binding domain PJ16_RS01160 PF01632 Ribosomal protein L35 PJ16_RS01165 PF00453 Ribosomal protein L20 PJ16_RS01170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ16_RS01170 PF00672 HAMP domain PJ16_RS01190 PF00083 Sugar (and other) transporter PJ16_RS01200 PF01967 MoaC family PJ16_RS01205 PF04359 Protein of unknown function (DUF493) PJ16_RS01215 PF03372 Endonuclease/Exonuclease/phosphatase family PJ16_RS01220 PF08019 Phosphoethanolamine transferase EptA/EptB PJ16_RS01220 PF00884 Sulfatase PJ16_RS01225 PF01219 Prokaryotic diacylglycerol kinase PJ16_RS01235 PF04909 Amidohydrolase PJ16_RS01245 PF05958 tRNA (Uracil-5-)-methyltransferase PJ16_RS01245 PF01938 TRAM domain PJ16_RS01255 PF02535 ZIP Zinc transporter PJ16_RS01260 PF01568 Molydopterin dinucleotide binding domain PJ16_RS01260 PF00384 Molybdopterin oxidoreductase PJ16_RS01260 PF18364 Molybdopterin oxidoreductase N-terminal domain PJ16_RS01280 PF01145 SPFH domain / Band 7 family PJ16_RS01285 PF01063 Amino-transferase class IV PJ16_RS01290 PF01361 Tautomerase enzyme PJ16_RS01295 PF00578 AhpC/TSA family PJ16_RS01300 PF02677 Epoxyqueuosine reductase QueH PJ16_RS01305 PF07977 FabA-like domain PJ16_RS01310 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PJ16_RS01310 PF00132 Bacterial transferase hexapeptide (six repeats) PJ16_RS01315 PF06689 ClpX C4-type zinc finger PJ16_RS01315 PF10431 C-terminal, D2-small domain, of ClpB protein PJ16_RS01315 PF07724 AAA domain (Cdc48 subfamily) PJ16_RS01330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PJ16_RS01330 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PJ16_RS01330 PF02142 MGS-like domain PJ16_RS01340 PF00923 Transaldolase/Fructose-6-phosphate aldolase PJ16_RS01350 PF01584 CheW-like domain PJ16_RS01355 PF00072 Response regulator receiver domain PJ16_RS01355 PF01584 CheW-like domain PJ16_RS01355 PF02895 Signal transducing histidine kinase, homodimeric domain PJ16_RS01355 PF01627 Hpt domain PJ16_RS01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ16_RS01360 PF00072 Response regulator receiver domain PJ16_RS01360 PF01584 CheW-like domain PJ16_RS01370 PF01272 Transcription elongation factor, GreA/GreB, C-term PJ16_RS01370 PF03449 Transcription elongation factor, N-terminal PJ16_RS01375 PF02684 Lipid-A-disaccharide synthetase PJ16_RS01390 PF01555 DNA methylase PJ16_RS01395 PF02684 Lipid-A-disaccharide synthetase PJ16_RS01405 PF07690 Major Facilitator Superfamily PJ16_RS01410 PF07690 Major Facilitator Superfamily PJ16_RS01415 PF01975 Survival protein SurE PJ16_RS01425 PF13673 Acetyltransferase (GNAT) domain PJ16_RS01430 PF02261 Aspartate decarboxylase PJ16_RS01435 PF02569 Pantoate-beta-alanine ligase PJ16_RS01440 PF02548 Ketopantoate hydroxymethyltransferase PJ16_RS01445 PF00905 Penicillin binding protein transpeptidase domain PJ16_RS01450 PF12857 TOBE-like domain PJ16_RS01450 PF17850 CysA C-terminal regulatory domain PJ16_RS01450 PF00005 ABC transporter PJ16_RS01455 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS01475 PF04301 Protein of unknown function (DUF452) PJ16_RS01480 PF00155 Aminotransferase class I and II PJ16_RS01485 PF00202 Aminotransferase class-III PJ16_RS01495 PF00893 Small Multidrug Resistance protein PJ16_RS01505 PF14693 Ribosomal protein TL5, C-terminal domain PJ16_RS01505 PF01386 Ribosomal L25p family PJ16_RS01510 PF01195 Peptidyl-tRNA hydrolase PJ16_RS01520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PJ16_RS01520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PJ16_RS01530 PF01817 Chorismate mutase type II PJ16_RS01530 PF00800 Prephenate dehydratase PJ16_RS01530 PF01842 ACT domain PJ16_RS01535 PF00155 Aminotransferase class I and II PJ16_RS01540 PF08345 Flagellar M-ring protein C-terminal PJ16_RS01540 PF01514 Secretory protein of YscJ/FliF family PJ16_RS01545 PF01706 FliG C-terminal domain PJ16_RS01545 PF14841 FliG middle domain PJ16_RS01545 PF14842 FliG N-terminal domain PJ16_RS01555 PF02780 Transketolase, C-terminal domain PJ16_RS01555 PF02779 Transketolase, pyrimidine binding domain PJ16_RS01555 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PJ16_RS01570 PF01209 ubiE/COQ5 methyltransferase family PJ16_RS01575 PF13742 OB-fold nucleic acid binding domain PJ16_RS01575 PF02601 Exonuclease VII, large subunit PJ16_RS01580 PF00266 Aminotransferase class-V PJ16_RS01585 PF01042 Endoribonuclease L-PSP PJ16_RS01590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJ16_RS01590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PJ16_RS01595 PF02504 Fatty acid synthesis protein PJ16_RS01600 PF01783 Ribosomal L32p protein family PJ16_RS01610 PF00334 Nucleoside diphosphate kinase PJ16_RS01615 PF00037 4Fe-4S binding domain PJ16_RS01620 PF00578 AhpC/TSA family PJ16_RS01620 PF10417 C-terminal domain of 1-Cys peroxiredoxin PJ16_RS01625 PF01312 FlhB HrpN YscU SpaS Family PJ16_RS01630 PF13677 Membrane MotB of proton-channel complex MotA/MotB PJ16_RS01630 PF00691 OmpA family PJ16_RS01635 PF01618 MotA/TolQ/ExbB proton channel family PJ16_RS01640 PF00476 DNA polymerase family A PJ16_RS01640 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PJ16_RS01640 PF01367 5'-3' exonuclease, C-terminal SAM fold PJ16_RS01640 PF01612 3'-5' exonuclease PJ16_RS01645 PF07690 Major Facilitator Superfamily PJ16_RS01645 PF00083 Sugar (and other) transporter PJ16_RS01650 PF01156 Inosine-uridine preferring nucleoside hydrolase PJ16_RS01655 PF09335 SNARE associated Golgi protein PJ16_RS01660 PF00005 ABC transporter PJ16_RS01660 PF17755 UvrA DNA-binding domain PJ16_RS01660 PF17760 UvrA interaction domain PJ16_RS01665 PF01925 Sulfite exporter TauE/SafE PJ16_RS01675 PF00425 chorismate binding enzyme PJ16_RS01675 PF04715 Anthranilate synthase component I, N terminal region PJ16_RS01680 PF00117 Glutamine amidotransferase class-I PJ16_RS01680 PF02885 Glycosyl transferase family, helical bundle domain PJ16_RS01680 PF00591 Glycosyl transferase family, a/b domain PJ16_RS01685 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PJ16_RS01690 PF00291 Pyridoxal-phosphate dependent enzyme PJ16_RS01695 PF00290 Tryptophan synthase alpha chain PJ16_RS01705 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PJ16_RS01705 PF04509 CheC-like family PJ16_RS01720 PF00037 4Fe-4S binding domain PJ16_RS01725 PF00072 Response regulator receiver domain PJ16_RS01725 PF00486 Transcriptional regulatory protein, C terminal PJ16_RS01735 PF02660 Glycerol-3-phosphate acyltransferase PJ16_RS01740 PF03150 Di-haem cytochrome c peroxidase PJ16_RS01740 PF00034 Cytochrome c PJ16_RS01745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PJ16_RS01745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PJ16_RS01745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PJ16_RS01745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PJ16_RS01750 PF01252 Signal peptidase (SPase) II PJ16_RS01755 PF03653 Uncharacterised protein family (UPF0093) PJ16_RS01760 PF04055 Radical SAM superfamily PJ16_RS01760 PF06969 HemN C-terminal domain PJ16_RS01770 PF02321 Outer membrane efflux protein PJ16_RS01775 PF00873 AcrB/AcrD/AcrF family PJ16_RS01780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PJ16_RS01780 PF00529 HlyD membrane-fusion protein of T1SS PJ16_RS01795 PF01165 Ribosomal protein S21 PJ16_RS01805 PF03738 Glutathionylspermidine synthase preATP-grasp PJ16_RS01810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PJ16_RS01810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJ16_RS01815 PF04461 Protein of unknown function (DUF520) PJ16_RS01830 PF01434 Peptidase family M41 PJ16_RS01830 PF06480 FtsH Extracellular PJ16_RS01830 PF17862 AAA+ lid domain PJ16_RS01830 PF00004 ATPase family associated with various cellular activities (AAA) PJ16_RS01840 PF00174 Oxidoreductase molybdopterin binding domain PJ16_RS01850 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PJ16_RS01855 PF01029 NusB family PJ16_RS01860 PF00885 6,7-dimethyl-8-ribityllumazine synthase PJ16_RS01865 PF00793 DAHP synthetase I family PJ16_RS01875 PF01926 50S ribosome-binding GTPase PJ16_RS01875 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PJ16_RS01880 PF01202 Shikimate kinase PJ16_RS01885 PF00579 tRNA synthetases class I (W and Y) PJ16_RS01890 PF02403 Seryl-tRNA synthetase N-terminal domain PJ16_RS01890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PJ16_RS01905 PF02887 Pyruvate kinase, alpha/beta domain PJ16_RS01905 PF00224 Pyruvate kinase, barrel domain PJ16_RS01905 PF00391 PEP-utilising enzyme, mobile domain PJ16_RS01910 PF06039 Malate:quinone oxidoreductase (Mqo) PJ16_RS01915 PF03309 Type III pantothenate kinase PJ16_RS01925 PF15437 Plasminogen-binding protein pgbA C-terminal PJ16_RS01935 PF02686 Glu-tRNAGln amidotransferase C subunit PJ16_RS01945 PF01475 Ferric uptake regulator family PJ16_RS01950 PF01336 OB-fold nucleic acid binding domain PJ16_RS01950 PF00152 tRNA synthetases class II (D, K and N) PJ16_RS01955 PF00464 Serine hydroxymethyltransferase PJ16_RS01970 PF08501 Shikimate dehydrogenase substrate binding domain PJ16_RS01980 PF01790 Prolipoprotein diacylglyceryl transferase PJ16_RS01985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PJ16_RS01990 PF02910 Fumarate reductase flavoprotein C-term PJ16_RS01990 PF00890 FAD binding domain PJ16_RS01995 PF13183 4Fe-4S dicluster domain PJ16_RS01995 PF13085 2Fe-2S iron-sulfur cluster binding domain PJ16_RS02000 PF12631 MnmE helical domain PJ16_RS02000 PF01926 50S ribosome-binding GTPase PJ16_RS02000 PF10396 GTP-binding protein TrmE N-terminus PJ16_RS02020 PF00732 GMC oxidoreductase PJ16_RS02020 PF05199 GMC oxidoreductase PJ16_RS02045 PF04264 YceI-like domain PJ16_RS02075 PF00005 ABC transporter PJ16_RS02075 PF12848 ABC transporter PJ16_RS02090 PF01205 Uncharacterized protein family UPF0029 PJ16_RS02090 PF09186 Domain of unknown function (DUF1949) PJ16_RS02130 PF08245 Mur ligase middle domain PJ16_RS02135 PF00953 Glycosyl transferase family 4 PJ16_RS02140 PF01676 Metalloenzyme superfamily PJ16_RS02140 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PJ16_RS02160 PF00890 FAD binding domain PJ16_RS02160 PF02910 Fumarate reductase flavoprotein C-term PJ16_RS02165 PF13085 2Fe-2S iron-sulfur cluster binding domain PJ16_RS02165 PF13183 4Fe-4S dicluster domain PJ16_RS02170 PF02754 Cysteine-rich domain PJ16_RS02175 PF03070 TENA/THI-4/PQQC family PJ16_RS02180 PF00550 Phosphopantetheine attachment site PJ16_RS02185 PF02801 Beta-ketoacyl synthase, C-terminal domain PJ16_RS02185 PF00109 Beta-ketoacyl synthase, N-terminal domain PJ16_RS02190 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PJ16_RS02200 PF00293 NUDIX domain PJ16_RS02205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ16_RS02205 PF08447 PAS fold PJ16_RS02205 PF13426 PAS domain PJ16_RS02215 PF00830 Ribosomal L28 family PJ16_RS02220 PF00834 Ribulose-phosphate 3 epimerase family PJ16_RS02225 PF00929 Exonuclease PJ16_RS02225 PF11490 DNA polymerase III polC-type N-terminus II PJ16_RS02225 PF02811 PHP domain PJ16_RS02225 PF14480 DNA polymerase III polC-type N-terminus I PJ16_RS02225 PF14579 Helix-hairpin-helix motif PJ16_RS02225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PJ16_RS02225 PF07733 Bacterial DNA polymerase III alpha NTPase domain PJ16_RS02230 PF01964 Radical SAM ThiC family PJ16_RS02250 PF04028 Domain of unknown function (DUF374) PJ16_RS02255 PF04055 Radical SAM superfamily PJ16_RS02255 PF01938 TRAM domain PJ16_RS02255 PF00919 Uncharacterized protein family UPF0004 PJ16_RS02265 PF08529 NusA N-terminal domain PJ16_RS02265 PF13184 NusA-like KH domain PJ16_RS02275 PF04055 Radical SAM superfamily PJ16_RS02280 PF05193 Peptidase M16 inactive domain PJ16_RS02285 PF00271 Helicase conserved C-terminal domain PJ16_RS02285 PF04851 Type III restriction enzyme, res subunit PJ16_RS02290 PF01152 Bacterial-like globin PJ16_RS02300 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS02305 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS02310 PF00005 ABC transporter PJ16_RS02335 PF00009 Elongation factor Tu GTP binding domain PJ16_RS02335 PF03143 Elongation factor Tu C-terminal domain PJ16_RS02335 PF03144 Elongation factor Tu domain 2 PJ16_RS02340 PF00471 Ribosomal protein L33 PJ16_RS02355 PF02357 Transcription termination factor nusG PJ16_RS02360 PF03946 Ribosomal protein L11, N-terminal domain PJ16_RS02360 PF00298 Ribosomal protein L11, RNA binding domain PJ16_RS02365 PF00687 Ribosomal protein L1p/L10e family PJ16_RS02370 PF00466 Ribosomal protein L10 PJ16_RS02375 PF16320 Ribosomal protein L7/L12 dimerisation domain PJ16_RS02375 PF00542 Ribosomal protein L7/L12 C-terminal domain PJ16_RS02380 PF04561 RNA polymerase Rpb2, domain 2 PJ16_RS02380 PF04563 RNA polymerase beta subunit PJ16_RS02380 PF10385 RNA polymerase beta subunit external 1 domain PJ16_RS02380 PF04565 RNA polymerase Rpb2, domain 3 PJ16_RS02380 PF00562 RNA polymerase Rpb2, domain 6 PJ16_RS02380 PF04560 RNA polymerase Rpb2, domain 7 PJ16_RS02385 PF04998 RNA polymerase Rpb1, domain 5 PJ16_RS02385 PF04983 RNA polymerase Rpb1, domain 3 PJ16_RS02385 PF00623 RNA polymerase Rpb1, domain 2 PJ16_RS02385 PF04997 RNA polymerase Rpb1, domain 1 PJ16_RS02385 PF05000 RNA polymerase Rpb1, domain 4 PJ16_RS02395 PF00701 Dihydrodipicolinate synthetase family PJ16_RS02405 PF08666 SAF domain PJ16_RS02405 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PJ16_RS02420 PF07690 Major Facilitator Superfamily PJ16_RS02430 PF05336 L-rhamnose mutarotase PJ16_RS02440 PF00171 Aldehyde dehydrogenase family PJ16_RS02445 PF00164 Ribosomal protein S12/S23 PJ16_RS02450 PF00177 Ribosomal protein S7p/S5e PJ16_RS02455 PF03144 Elongation factor Tu domain 2 PJ16_RS02455 PF00009 Elongation factor Tu GTP binding domain PJ16_RS02455 PF03764 Elongation factor G, domain IV PJ16_RS02455 PF14492 Elongation Factor G, domain II PJ16_RS02455 PF00679 Elongation factor G C-terminus PJ16_RS02485 PF00218 Indole-3-glycerol phosphate synthase PJ16_RS02510 PF00762 Ferrochelatase PJ16_RS02515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PJ16_RS02515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PJ16_RS02520 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PJ16_RS02525 PF02272 DHHA1 domain PJ16_RS02525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PJ16_RS02525 PF01411 tRNA synthetases class II (A) PJ16_RS02530 PF02545 Maf-like protein PJ16_RS02535 PF00912 Transglycosylase PJ16_RS02535 PF17092 Penicillin-binding protein OB-like domain PJ16_RS02535 PF00905 Penicillin binding protein transpeptidase domain PJ16_RS02540 PF00004 ATPase family associated with various cellular activities (AAA) PJ16_RS02540 PF07724 AAA domain (Cdc48 subfamily) PJ16_RS02540 PF02861 Clp amino terminal domain, pathogenicity island component PJ16_RS02540 PF10431 C-terminal, D2-small domain, of ClpB protein PJ16_RS02540 PF17871 AAA lid domain PJ16_RS02545 PF02583 Metal-sensitive transcriptional repressor PJ16_RS02550 PF03572 Peptidase family S41 PJ16_RS02550 PF13180 PDZ domain PJ16_RS02555 PF01259 SAICAR synthetase PJ16_RS02560 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase PJ16_RS02575 PF01553 Acyltransferase PJ16_RS02580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PJ16_RS02585 PF00183 Hsp90 protein PJ16_RS02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ16_RS02590 PF00581 Rhodanese-like domain PJ16_RS02610 PF02049 Flagellar hook-basal body complex protein FliE PJ16_RS02615 PF00460 Flagella basal body rod protein PJ16_RS02615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ16_RS02620 PF00460 Flagella basal body rod protein PJ16_RS02635 PF03971 Monomeric isocitrate dehydrogenase PJ16_RS02640 PF00056 lactate/malate dehydrogenase, NAD binding domain PJ16_RS02640 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PJ16_RS02645 PF08442 ATP-grasp domain PJ16_RS02645 PF00549 CoA-ligase PJ16_RS02650 PF02629 CoA binding domain PJ16_RS02650 PF00549 CoA-ligase PJ16_RS02660 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PJ16_RS02660 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PJ16_RS02660 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PJ16_RS02665 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PJ16_RS02685 PF00348 Polyprenyl synthetase PJ16_RS02690 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PJ16_RS02690 PF01488 Shikimate / quinate 5-dehydrogenase PJ16_RS02690 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PJ16_RS02695 PF03129 Anticodon binding domain PJ16_RS02695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PJ16_RS02695 PF04073 Aminoacyl-tRNA editing domain PJ16_RS02705 PF03900 Porphobilinogen deaminase, C-terminal domain PJ16_RS02705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PJ16_RS02710 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PJ16_RS02720 PF07195 Flagellar hook-associated protein 2 C-terminus PJ16_RS02720 PF07196 Flagellin hook IN motif PJ16_RS02720 PF02465 Flagellar hook-associated protein 2 N-terminus PJ16_RS02725 PF02561 Flagellar protein FliS PJ16_RS02735 PF09285 Elongation factor P, C-terminal PJ16_RS02735 PF08207 Elongation factor P (EF-P) KOW-like domain PJ16_RS02735 PF01132 Elongation factor P (EF-P) OB domain PJ16_RS02770 PF00171 Aldehyde dehydrogenase family PJ16_RS02775 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJ16_RS02790 PF00772 DnaB-like helicase N terminal domain PJ16_RS02790 PF03796 DnaB-like helicase C terminal domain PJ16_RS02805 PF03981 Ubiquinol-cytochrome C chaperone PJ16_RS02805 PF13099 Domain of unknown function (DUF3944) PJ16_RS02855 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PJ16_RS02855 PF00925 GTP cyclohydrolase II PJ16_RS02860 PF09424 Yqey-like protein PJ16_RS02865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PJ16_RS02865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PJ16_RS02865 PF00205 Thiamine pyrophosphate enzyme, central domain PJ16_RS02870 PF10369 Small subunit of acetolactate synthase PJ16_RS02875 PF00132 Bacterial transferase hexapeptide (six repeats) PJ16_RS02875 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PJ16_RS02880 PF02547 Queuosine biosynthesis protein PJ16_RS02885 PF00902 Sec-independent protein translocase protein (TatC) PJ16_RS02890 PF02416 mttA/Hcf106 family PJ16_RS02895 PF04055 Radical SAM superfamily PJ16_RS02895 PF06969 HemN C-terminal domain PJ16_RS02900 PF00293 NUDIX domain PJ16_RS02905 PF01842 ACT domain PJ16_RS02905 PF13840 ACT domain PJ16_RS02905 PF00696 Amino acid kinase family PJ16_RS02920 PF00809 Pterin binding enzyme PJ16_RS02925 PF03120 NAD-dependent DNA ligase OB-fold domain PJ16_RS02925 PF01653 NAD-dependent DNA ligase adenylation domain PJ16_RS02925 PF00533 BRCA1 C Terminus (BRCT) domain PJ16_RS02940 PF01687 Riboflavin kinase PJ16_RS02940 PF06574 FAD synthetase PJ16_RS02945 PF13847 Methyltransferase domain PJ16_RS02960 PF03458 UPF0126 domain PJ16_RS02970 PF10576 Iron-sulfur binding domain of endonuclease III PJ16_RS02970 PF00633 Helix-hairpin-helix motif PJ16_RS02970 PF00730 HhH-GPD superfamily base excision DNA repair protein PJ16_RS02980 PF01116 Fructose-bisphosphate aldolase class-II PJ16_RS03000 PF00209 Sodium:neurotransmitter symporter family PJ16_RS03005 PF03473 MOSC domain PJ16_RS03005 PF03475 3-alpha domain PJ16_RS03010 PF00085 Thioredoxin PJ16_RS03010 PF02683 Cytochrome C biogenesis protein transmembrane region PJ16_RS03010 PF11412 Disulphide bond corrector protein DsbC PJ16_RS03015 PF03976 Polyphosphate kinase 2 (PPK2) PJ16_RS03020 PF01546 Peptidase family M20/M25/M40 PJ16_RS03020 PF07687 Peptidase dimerisation domain PJ16_RS03025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PJ16_RS03030 PF02687 FtsX-like permease family PJ16_RS03030 PF00005 ABC transporter PJ16_RS03030 PF12704 MacB-like periplasmic core domain PJ16_RS03035 PF02321 Outer membrane efflux protein PJ16_RS03050 PF03062 MBOAT, membrane-bound O-acyltransferase family PJ16_RS03055 PF00210 Ferritin-like domain PJ16_RS03060 PF12849 PBP superfamily domain PJ16_RS03065 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS03070 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS03075 PF00005 ABC transporter PJ16_RS03085 PF01554 MatE PJ16_RS03100 PF01300 Telomere recombination PJ16_RS03100 PF00708 Acylphosphatase PJ16_RS03100 PF17788 HypF Kae1-like domain PJ16_RS03100 PF07503 HypF finger PJ16_RS03105 PF02492 CobW/HypB/UreG, nucleotide-binding domain PJ16_RS03110 PF01455 HupF/HypC family PJ16_RS03115 PF01924 Hydrogenase formation hypA family PJ16_RS03120 PF00586 AIR synthase related protein, N-terminal domain PJ16_RS03120 PF02769 AIR synthase related protein, C-terminal domain PJ16_RS03125 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PJ16_RS03140 PF00773 RNB domain PJ16_RS03145 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PJ16_RS03145 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PJ16_RS03155 PF02481 DNA recombination-mediator protein A PJ16_RS03155 PF17782 DprA winged helix domain PJ16_RS03160 PF03652 Holliday junction resolvase PJ16_RS03165 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF PJ16_RS03165 PF01189 16S rRNA methyltransferase RsmB/F PJ16_RS03165 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF PJ16_RS03170 PF01625 Peptide methionine sulfoxide reductase PJ16_RS03175 PF00719 Inorganic pyrophosphatase PJ16_RS03185 PF00152 tRNA synthetases class II (D, K and N) PJ16_RS03185 PF01336 OB-fold nucleic acid binding domain PJ16_RS03185 PF02938 GAD domain PJ16_RS03190 PF01513 ATP-NAD kinase PJ16_RS03195 PF13476 AAA domain PJ16_RS03200 PF00990 Diguanylate cyclase, GGDEF domain PJ16_RS03200 PF00072 Response regulator receiver domain PJ16_RS03205 PF01026 TatD related DNase PJ16_RS03210 PF00877 NlpC/P60 family PJ16_RS03210 PF01476 LysM domain PJ16_RS03215 PF05036 Sporulation related domain PJ16_RS03215 PF03330 Lytic transglycolase PJ16_RS03235 PF01926 50S ribosome-binding GTPase PJ16_RS03245 PF03717 Penicillin-binding Protein dimerisation domain PJ16_RS03245 PF00905 Penicillin binding protein transpeptidase domain PJ16_RS03250 PF00557 Metallopeptidase family M24 PJ16_RS03250 PF01321 Creatinase/Prolidase N-terminal domain PJ16_RS03255 PF00854 POT family PJ16_RS03260 PF00854 POT family PJ16_RS03270 PF00854 POT family PJ16_RS03290 PF07650 KH domain PJ16_RS03290 PF01926 50S ribosome-binding GTPase PJ16_RS03295 PF07724 AAA domain (Cdc48 subfamily) PJ16_RS03295 PF10431 C-terminal, D2-small domain, of ClpB protein PJ16_RS03300 PF00227 Proteasome subunit PJ16_RS03305 PF01281 Ribosomal protein L9, N-terminal domain PJ16_RS03305 PF03948 Ribosomal protein L9, C-terminal domain PJ16_RS03310 PF00764 Arginosuccinate synthase PJ16_RS03315 PF01479 S4 domain PJ16_RS03320 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PJ16_RS03325 PF00005 ABC transporter PJ16_RS03325 PF12399 Branched-chain amino acid ATP-binding cassette transporter PJ16_RS03330 PF00309 Sigma-54 factor, Activator interacting domain (AID) PJ16_RS03330 PF04963 Sigma-54 factor, core binding domain PJ16_RS03330 PF04552 Sigma-54, DNA binding domain PJ16_RS03365 PF02669 K+-transporting ATPase, c chain PJ16_RS03580 PF04231 Endonuclease I PJ16_RS03675 PF17757 UvrB interaction domain PJ16_RS03675 PF12344 Ultra-violet resistance protein B PJ16_RS03675 PF02151 UvrB/uvrC motif PJ16_RS03675 PF00271 Helicase conserved C-terminal domain PJ16_RS03675 PF04851 Type III restriction enzyme, res subunit PJ16_RS03695 PF00270 DEAD/DEAH box helicase PJ16_RS03695 PF00271 Helicase conserved C-terminal domain PJ16_RS03695 PF17764 3′ DNA-binding domain (3′BD) PJ16_RS03695 PF18074 Primosomal protein N C-terminal domain PJ16_RS03695 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PJ16_RS03705 PF04551 GcpE protein PJ16_RS03710 PF02107 Flagellar L-ring protein PJ16_RS03715 PF01515 Phosphate acetyl/butaryl transferase PJ16_RS03720 PF00871 Acetokinase family PJ16_RS03740 PF01795 MraW methylase family PJ16_RS03745 PF13145 PPIC-type PPIASE domain PJ16_RS03750 PF02491 SHS2 domain inserted in FTSA PJ16_RS03755 PF00091 Tubulin/FtsZ family, GTPase domain PJ16_RS03755 PF12327 FtsZ family, C-terminal domain PJ16_RS03760 PF00460 Flagella basal body rod protein PJ16_RS03760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ16_RS03765 PF00460 Flagella basal body rod protein PJ16_RS03765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ16_RS03770 PF00120 Glutamine synthetase, catalytic domain PJ16_RS03770 PF03951 Glutamine synthetase, beta-Grasp domain PJ16_RS03780 PF01136 Peptidase family U32 PJ16_RS03785 PF00731 AIR carboxylase PJ16_RS03795 PF02091 Glycyl-tRNA synthetase alpha subunit PJ16_RS03800 PF01784 NIF3 (NGG1p interacting factor 3) PJ16_RS03810 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PJ16_RS03810 PF02390 Putative methyltransferase PJ16_RS03815 PF00849 RNA pseudouridylate synthase PJ16_RS03820 PF00448 SRP54-type protein, GTPase domain PJ16_RS03820 PF02881 SRP54-type protein, helical bundle domain PJ16_RS03820 PF02978 Signal peptide binding domain PJ16_RS03825 PF00886 Ribosomal protein S16 PJ16_RS03835 PF05239 PRC-barrel domain PJ16_RS03835 PF01782 RimM N-terminal domain PJ16_RS03840 PF01746 tRNA (Guanine-1)-methyltransferase PJ16_RS03845 PF01245 Ribosomal protein L19 PJ16_RS03850 PF00576 HIUase/Transthyretin family PJ16_RS03855 PF01474 Class-II DAHP synthetase family PJ16_RS03860 PF03960 ArsC family PJ16_RS03865 PF14579 Helix-hairpin-helix motif PJ16_RS03865 PF07733 Bacterial DNA polymerase III alpha NTPase domain PJ16_RS03865 PF02811 PHP domain PJ16_RS03865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PJ16_RS03870 PF01168 Alanine racemase, N-terminal domain PJ16_RS03875 PF00669 Bacterial flagellin N-terminal helical region PJ16_RS03885 PF17827 PrmC N-terminal domain PJ16_RS03885 PF05175 Methyltransferase small domain PJ16_RS03890 PF01435 Peptidase family M48 PJ16_RS03900 PF00994 Probable molybdopterin binding domain PJ16_RS03905 PF01544 CorA-like Mg2+ transporter protein PJ16_RS03925 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS03935 PF08402 TOBE domain PJ16_RS03935 PF00005 ABC transporter PJ16_RS03945 PF00497 Bacterial extracellular solute-binding proteins, family 3 PJ16_RS04030 PF07282 Putative transposase DNA-binding domain PJ16_RS04030 PF01385 Probable transposase PJ16_RS04030 PF12323 Helix-turn-helix domain PJ16_RS04035 PF03544 Gram-negative bacterial TonB protein C-terminal PJ16_RS04040 PF07715 TonB-dependent Receptor Plug Domain PJ16_RS04040 PF00593 TonB dependent receptor PJ16_RS04050 PF01025 GrpE PJ16_RS04055 PF00012 Hsp70 protein PJ16_RS04060 PF12706 Beta-lactamase superfamily domain PJ16_RS04070 PF00155 Aminotransferase class I and II PJ16_RS04075 PF06426 Serine acetyltransferase, N-terminal PJ16_RS04075 PF00132 Bacterial transferase hexapeptide (six repeats) PJ16_RS04080 PF17810 Arginine decarboxylase helical bundle domain PJ16_RS04080 PF17944 Arginine decarboxylase C-terminal helical extension PJ16_RS04080 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PJ16_RS04085 PF03129 Anticodon binding domain PJ16_RS04085 PF13393 Histidyl-tRNA synthetase PJ16_RS04090 PF02223 Thymidylate kinase PJ16_RS04095 PF01467 Cytidylyltransferase-like PJ16_RS04100 PF02441 Flavoprotein PJ16_RS04110 PF03180 NLPA lipoprotein PJ16_RS04115 PF03180 NLPA lipoprotein PJ16_RS04120 PF03180 NLPA lipoprotein PJ16_RS04125 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS04130 PF00005 ABC transporter PJ16_RS04130 PF09383 NIL domain PJ16_RS04135 PF00133 tRNA synthetases class I (I, L, M and V) PJ16_RS04135 PF08264 Anticodon-binding domain of tRNA PJ16_RS04135 PF10458 Valyl tRNA synthetase tRNA binding arm PJ16_RS04145 PF13361 UvrD-like helicase C-terminal domain PJ16_RS04145 PF00580 UvrD/REP helicase N-terminal domain PJ16_RS04155 PF08534 Redoxin PJ16_RS04160 PF00384 Molybdopterin oxidoreductase PJ16_RS04160 PF01568 Molydopterin dinucleotide binding domain PJ16_RS04160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJ16_RS04165 PF12838 4Fe-4S dicluster domain PJ16_RS04165 PF12800 4Fe-4S binding domain PJ16_RS04170 PF13187 4Fe-4S dicluster domain PJ16_RS04170 PF12801 4Fe-4S binding domain PJ16_RS04175 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) PJ16_RS04205 PF01743 Poly A polymerase head domain PJ16_RS04205 PF12627 Probable RNA and SrmB- binding site of polymerase A PJ16_RS04205 PF13735 tRNA nucleotidyltransferase domain 2 putative PJ16_RS04210 PF01842 ACT domain PJ16_RS04210 PF00551 Formyl transferase PJ16_RS04215 PF00266 Aminotransferase class-V PJ16_RS04225 PF00512 His Kinase A (phospho-acceptor) domain PJ16_RS04225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ16_RS04235 PF01225 Mur ligase family, catalytic domain PJ16_RS04235 PF08245 Mur ligase middle domain PJ16_RS04235 PF02875 Mur ligase family, glutamate ligase domain PJ16_RS04250 PF07478 D-ala D-ala ligase C-terminus PJ16_RS04250 PF01820 D-ala D-ala ligase N-terminus PJ16_RS04255 PF01330 RuvA N terminal domain PJ16_RS04255 PF07499 RuvA, C-terminal domain PJ16_RS04265 PF03023 Lipid II flippase MurJ PJ16_RS04270 PF01406 tRNA synthetases class I (C) catalytic domain PJ16_RS04270 PF09190 DALR domain PJ16_RS04275 PF00664 ABC transporter transmembrane region PJ16_RS04275 PF00005 ABC transporter PJ16_RS04280 PF01180 Dihydroorotate dehydrogenase PJ16_RS04285 PF00675 Insulinase (Peptidase family M16) PJ16_RS04285 PF05193 Peptidase M16 inactive domain PJ16_RS04290 PF00701 Dihydrodipicolinate synthetase family PJ16_RS04305 PF00753 Metallo-beta-lactamase superfamily PJ16_RS04310 PF02540 NAD synthase PJ16_RS04315 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PJ16_RS04320 PF00291 Pyridoxal-phosphate dependent enzyme PJ16_RS04325 PF02348 Cytidylyltransferase PJ16_RS04335 PF00497 Bacterial extracellular solute-binding proteins, family 3 PJ16_RS04340 PF00813 FliP family PJ16_RS04345 PF00132 Bacterial transferase hexapeptide (six repeats) PJ16_RS04345 PF12804 MobA-like NTP transferase domain PJ16_RS04350 PF04127 DNA / pantothenate metabolism flavoprotein PJ16_RS04350 PF02441 Flavoprotein PJ16_RS04360 PF01255 Putative undecaprenyl diphosphate synthase PJ16_RS04375 PF01416 tRNA pseudouridine synthase PJ16_RS04380 PF00291 Pyridoxal-phosphate dependent enzyme PJ16_RS04380 PF13291 ACT domain PJ16_RS04395 PF05958 tRNA (Uracil-5-)-methyltransferase PJ16_RS04400 PF03553 Na+/H+ antiporter family PJ16_RS04405 PF00106 short chain dehydrogenase PJ16_RS04415 PF11791 Aconitate B N-terminal domain PJ16_RS04415 PF06434 Aconitate hydratase 2 N-terminus PJ16_RS04415 PF00330 Aconitase family (aconitate hydratase) PJ16_RS04420 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PJ16_RS04420 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PJ16_RS04430 PF09334 tRNA synthetases class I (M) PJ16_RS04430 PF01588 Putative tRNA binding domain PJ16_RS04430 PF00133 tRNA synthetases class I (I, L, M and V) PJ16_RS04440 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PJ16_RS04465 PF00749 tRNA synthetases class I (E and Q), catalytic domain PJ16_RS04470 PF00149 Calcineurin-like phosphoesterase PJ16_RS04475 PF02666 Phosphatidylserine decarboxylase PJ16_RS04480 PF01312 FlhB HrpN YscU SpaS Family PJ16_RS04490 PF07690 Major Facilitator Superfamily PJ16_RS04505 PF00202 Aminotransferase class-III PJ16_RS04515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PJ16_RS04515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PJ16_RS04520 PF10502 Signal peptidase, peptidase S26 PJ16_RS04525 PF00994 Probable molybdopterin binding domain PJ16_RS04525 PF03454 MoeA C-terminal region (domain IV) PJ16_RS04525 PF03453 MoeA N-terminal region (domain I and II) PJ16_RS04530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PJ16_RS04540 PF00117 Glutamine amidotransferase class-I PJ16_RS04540 PF00591 Glycosyl transferase family, a/b domain PJ16_RS04540 PF02885 Glycosyl transferase family, helical bundle domain PJ16_RS04545 PF00425 chorismate binding enzyme PJ16_RS04545 PF04715 Anthranilate synthase component I, N terminal region PJ16_RS04550 PF18644 Phage integrase SAM-like domain PJ16_RS04550 PF00589 Phage integrase family PJ16_RS04560 PF02600 Disulfide bond formation protein DsbB PJ16_RS04585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PJ16_RS04620 PF00771 FHIPEP family PJ16_RS04625 PF02082 Transcriptional regulator PJ16_RS04630 PF00312 Ribosomal protein S15 PJ16_RS04635 PF17854 FtsK alpha domain PJ16_RS04635 PF01580 FtsK/SpoIIIE family PJ16_RS04635 PF09397 Ftsk gamma domain PJ16_RS04640 PF00669 Bacterial flagellin N-terminal helical region PJ16_RS04640 PF00700 Bacterial flagellin C-terminal helical region PJ16_RS04655 PF00005 ABC transporter PJ16_RS04655 PF16326 ABC transporter C-terminal domain PJ16_RS04655 PF12848 ABC transporter PJ16_RS04660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ16_RS04660 PF00512 His Kinase A (phospho-acceptor) domain PJ16_RS04660 PF00989 PAS fold PJ16_RS04660 PF16736 Single Cache-like PJ16_RS04665 PF00486 Transcriptional regulatory protein, C terminal PJ16_RS04665 PF00072 Response regulator receiver domain PJ16_RS04670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PJ16_RS04670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJ16_RS04670 PF01842 ACT domain PJ16_RS04680 PF00575 S1 RNA binding domain PJ16_RS04685 PF02401 LytB protein PJ16_RS04690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PJ16_RS04695 PF03484 tRNA synthetase B5 domain PJ16_RS04695 PF03147 Ferredoxin-fold anticodon binding domain PJ16_RS04695 PF01588 Putative tRNA binding domain PJ16_RS04695 PF03483 B3/4 domain PJ16_RS04695 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PJ16_RS04700 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PJ16_RS04700 PF01409 tRNA synthetases class II core domain (F) PJ16_RS04705 PF01230 HIT domain PJ16_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS04725 PF00005 ABC transporter PJ16_RS04730 PF01235 Sodium:alanine symporter family PJ16_RS04735 PF00588 SpoU rRNA Methylase family PJ16_RS04740 PF00842 Alanine racemase, C-terminal domain PJ16_RS04740 PF01168 Alanine racemase, N-terminal domain PJ16_RS04765 PF02630 SCO1/SenC PJ16_RS04770 PF00291 Pyridoxal-phosphate dependent enzyme PJ16_RS04775 PF00216 Bacterial DNA-binding protein PJ16_RS04785 PF03061 Thioesterase superfamily PJ16_RS04795 PF02554 Carbon starvation protein CstA PJ16_RS04795 PF13722 5TM C-terminal transporter carbon starvation CstA PJ16_RS04800 PF14572 Phosphoribosyl synthetase-associated domain PJ16_RS04800 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PJ16_RS04805 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS04810 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS04815 PF00497 Bacterial extracellular solute-binding proteins, family 3 PJ16_RS04820 PF00005 ABC transporter PJ16_RS04825 PF01739 CheR methyltransferase, SAM binding domain PJ16_RS04830 PF00072 Response regulator receiver domain PJ16_RS04830 PF01339 CheB methylesterase PJ16_RS04835 PF02502 Ribose/Galactose Isomerase PJ16_RS04845 PF00156 Phosphoribosyl transferase domain PJ16_RS04855 PF00883 Cytosol aminopeptidase family, catalytic domain PJ16_RS04860 PF01926 50S ribosome-binding GTPase PJ16_RS04860 PF06071 Protein of unknown function (DUF933) PJ16_RS04865 PF14698 Argininosuccinate lyase C-terminal PJ16_RS04865 PF00206 Lyase PJ16_RS04870 PF01293 Phosphoenolpyruvate carboxykinase PJ16_RS04875 PF02436 Conserved carboxylase domain PJ16_RS04875 PF00364 Biotin-requiring enzyme PJ16_RS04875 PF00682 HMGL-like PJ16_RS04880 PF00209 Sodium:neurotransmitter symporter family PJ16_RS04885 PF00209 Sodium:neurotransmitter symporter family PJ16_RS04890 PF00137 ATP synthase subunit C PJ16_RS04905 PF01553 Acyltransferase PJ16_RS04905 PF00501 AMP-binding enzyme PJ16_RS04950 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS04960 PF01043 SecA preprotein cross-linking domain PJ16_RS04960 PF02810 SEC-C motif PJ16_RS04960 PF07517 SecA DEAD-like domain PJ16_RS04960 PF07516 SecA Wing and Scaffold domain PJ16_RS04965 PF03548 Outer membrane lipoprotein carrier protein LolA PJ16_RS04975 PF05970 PIF1-like helicase PJ16_RS04975 PF02689 Helicase PJ16_RS04985 PF00795 Carbon-nitrogen hydrolase PJ16_RS04990 PF16916 Dimerisation domain of Zinc Transporter PJ16_RS04990 PF01545 Cation efflux family PJ16_RS04995 PF04371 Porphyromonas-type peptidyl-arginine deiminase PJ16_RS05005 PF00672 HAMP domain PJ16_RS05005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ16_RS05005 PF02743 Cache domain PJ16_RS05015 PF02142 MGS-like domain PJ16_RS05015 PF01808 AICARFT/IMPCHase bienzyme PJ16_RS05020 PF00226 DnaJ domain PJ16_RS05020 PF05099 Tellurite resistance protein TerB PJ16_RS05025 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PJ16_RS05025 PF02769 AIR synthase related protein, C-terminal domain PJ16_RS05025 PF00586 AIR synthase related protein, N-terminal domain PJ16_RS05030 PF01926 50S ribosome-binding GTPase PJ16_RS05030 PF12631 MnmE helical domain PJ16_RS05030 PF10396 GTP-binding protein TrmE N-terminus PJ16_RS05040 PF14849 YidC periplasmic domain PJ16_RS05040 PF02096 60Kd inner membrane protein PJ16_RS05045 PF01809 Putative membrane protein insertion efficiency factor PJ16_RS05050 PF00825 Ribonuclease P PJ16_RS05055 PF00468 Ribosomal protein L34 PJ16_RS05075 PF03061 Thioesterase superfamily PJ16_RS05120 PF08003 Protein of unknown function (DUF1698) PJ16_RS05135 PF00565 Staphylococcal nuclease homologue PJ16_RS05140 PF01546 Peptidase family M20/M25/M40 PJ16_RS05140 PF07687 Peptidase dimerisation domain PJ16_RS05145 PF00083 Sugar (and other) transporter PJ16_RS05145 PF08946 Osmosensory transporter coiled coil PJ16_RS05150 PF00497 Bacterial extracellular solute-binding proteins, family 3 PJ16_RS05155 PF16668 Adhesin from Campylobacter PJ16_RS05160 PF03883 Peroxide stress protein YaaA PJ16_RS05165 PF01546 Peptidase family M20/M25/M40 PJ16_RS05165 PF07687 Peptidase dimerisation domain PJ16_RS05175 PF07690 Major Facilitator Superfamily PJ16_RS05190 PF17437 Family of unknown function (DUF5416) PJ16_RS05195 PF02665 Nitrate reductase gamma subunit PJ16_RS05195 PF13183 4Fe-4S dicluster domain PJ16_RS05195 PF02754 Cysteine-rich domain PJ16_RS05200 PF04055 Radical SAM superfamily PJ16_RS05200 PF06969 HemN C-terminal domain PJ16_RS05205 PF10788 Protein of unknown function (DUF2603) PJ16_RS05210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PJ16_RS05210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PJ16_RS05215 PF00490 Delta-aminolevulinic acid dehydratase PJ16_RS05220 PF00925 GTP cyclohydrolase II PJ16_RS05225 PF02527 rRNA small subunit methyltransferase G PJ16_RS05235 PF03601 Conserved hypothetical protein 698 PJ16_RS05240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PJ16_RS05240 PF03466 LysR substrate binding domain PJ16_RS05245 PF00140 Sigma-70 factor, region 1.2 PJ16_RS05245 PF04542 Sigma-70 region 2 PJ16_RS05245 PF04539 Sigma-70 region 3 PJ16_RS05245 PF04545 Sigma-70, region 4 PJ16_RS05265 PF17862 AAA+ lid domain PJ16_RS05265 PF01434 Peptidase family M41 PJ16_RS05265 PF06480 FtsH Extracellular PJ16_RS05265 PF00004 ATPase family associated with various cellular activities (AAA) PJ16_RS05270 PF00919 Uncharacterized protein family UPF0004 PJ16_RS05270 PF04055 Radical SAM superfamily PJ16_RS05280 PF01761 3-dehydroquinate synthase PJ16_RS05290 PF01702 Queuine tRNA-ribosyltransferase PJ16_RS05310 PF05140 ResB-like family PJ16_RS05310 PF01578 Cytochrome C assembly protein PJ16_RS05315 PF00005 ABC transporter PJ16_RS05320 PF12399 Branched-chain amino acid ATP-binding cassette transporter PJ16_RS05320 PF00005 ABC transporter PJ16_RS05325 PF11862 Domain of unknown function (DUF3382) PJ16_RS05325 PF02653 Branched-chain amino acid transport system / permease component PJ16_RS05330 PF02653 Branched-chain amino acid transport system / permease component PJ16_RS05335 PF13458 Periplasmic binding protein PJ16_RS05340 PF13458 Periplasmic binding protein PJ16_RS05360 PF01118 Semialdehyde dehydrogenase, NAD binding domain PJ16_RS05360 PF02774 Semialdehyde dehydrogenase, dimerisation domain PJ16_RS05365 PF00158 Sigma-54 interaction domain PJ16_RS05365 PF00072 Response regulator receiver domain PJ16_RS05380 PF00521 DNA gyrase/topoisomerase IV, subunit A PJ16_RS05380 PF03989 DNA gyrase C-terminal domain, beta-propeller PJ16_RS05395 PF00009 Elongation factor Tu GTP binding domain PJ16_RS05395 PF03144 Elongation factor Tu domain 2 PJ16_RS05395 PF06421 GTP-binding protein LepA C-terminus PJ16_RS05395 PF00679 Elongation factor G C-terminus PJ16_RS05405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PJ16_RS05405 PF00529 HlyD membrane-fusion protein of T1SS PJ16_RS05410 PF00873 AcrB/AcrD/AcrF family PJ16_RS05420 PF04376 Arginine-tRNA-protein transferase, N terminus PJ16_RS05420 PF04377 Arginine-tRNA-protein transferase, C terminus PJ16_RS05430 PF02785 Biotin carboxylase C-terminal domain PJ16_RS05430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PJ16_RS05430 PF00289 Biotin carboxylase, N-terminal domain PJ16_RS05435 PF01098 Cell cycle protein PJ16_RS05440 PF04101 Glycosyltransferase family 28 C-terminal domain PJ16_RS05440 PF03033 Glycosyltransferase family 28 N-terminal domain PJ16_RS05455 PF12833 Helix-turn-helix domain PJ16_RS05460 PF02581 Thiamine monophosphate synthase PJ16_RS05465 PF04055 Radical SAM superfamily PJ16_RS05465 PF06968 Biotin and Thiamin Synthesis associated domain PJ16_RS05470 PF05690 Thiazole biosynthesis protein ThiG PJ16_RS05475 PF00899 ThiF family PJ16_RS05475 PF00581 Rhodanese-like domain PJ16_RS05485 PF07687 Peptidase dimerisation domain PJ16_RS05485 PF01546 Peptidase family M20/M25/M40 PJ16_RS05495 PF02146 Sir2 family PJ16_RS05505 PF00488 MutS domain V PJ16_RS05505 PF01713 Smr domain PJ16_RS05515 PF01225 Mur ligase family, catalytic domain PJ16_RS05515 PF08245 Mur ligase middle domain PJ16_RS05515 PF02875 Mur ligase family, glutamate ligase domain PJ16_RS05535 PF00478 IMP dehydrogenase / GMP reductase domain PJ16_RS05535 PF00571 CBS domain PJ16_RS05540 PF01425 Amidase PJ16_RS05550 PF08264 Anticodon-binding domain of tRNA PJ16_RS05550 PF00133 tRNA synthetases class I (I, L, M and V) PJ16_RS05555 PF02464 Competence-damaged protein PJ16_RS05555 PF00994 Probable molybdopterin binding domain PJ16_RS05560 PF00583 Acetyltransferase (GNAT) family PJ16_RS05570 PF00881 Nitroreductase family PJ16_RS05575 PF01066 CDP-alcohol phosphatidyltransferase PJ16_RS05580 PF17820 PDZ domain PJ16_RS05580 PF02163 Peptidase family M50 PJ16_RS05585 PF04393 Protein of unknown function (DUF535) PJ16_RS05590 PF01250 Ribosomal protein S6 PJ16_RS05595 PF00436 Single-strand binding protein family PJ16_RS05600 PF01084 Ribosomal protein S18 PJ16_RS05605 PF00004 ATPase family associated with various cellular activities (AAA) PJ16_RS05605 PF02190 ATP-dependent protease La (LON) substrate-binding domain PJ16_RS05605 PF05362 Lon protease (S16) C-terminal proteolytic domain PJ16_RS05615 PF02623 FliW protein PJ16_RS05620 PF03807 NADP oxidoreductase coenzyme F420-dependent PJ16_RS05620 PF14748 Pyrroline-5-carboxylate reductase dimerisation PJ16_RS05645 PF02581 Thiamine monophosphate synthase PJ16_RS05650 PF08543 Phosphomethylpyrimidine kinase PJ16_RS05665 PF03461 TRCF domain PJ16_RS05665 PF02559 CarD-like/TRCF domain PJ16_RS05665 PF00270 DEAD/DEAH box helicase PJ16_RS05665 PF00271 Helicase conserved C-terminal domain PJ16_RS05665 PF17757 UvrB interaction domain PJ16_RS05675 PF01551 Peptidase family M23 PJ16_RS05675 PF04225 Opacity-associated protein A LysM-like domain PJ16_RS05680 PF02875 Mur ligase family, glutamate ligase domain PJ16_RS05680 PF08245 Mur ligase middle domain PJ16_RS05695 PF00133 tRNA synthetases class I (I, L, M and V) PJ16_RS05695 PF09334 tRNA synthetases class I (M) PJ16_RS05695 PF13603 Leucyl-tRNA synthetase, Domain 2 PJ16_RS05700 PF02355 Protein export membrane protein PJ16_RS05700 PF07549 SecD/SecF GG Motif PJ16_RS05705 PF02355 Protein export membrane protein PJ16_RS05710 PF02699 Preprotein translocase subunit PJ16_RS05720 PF00438 S-adenosylmethionine synthetase, N-terminal domain PJ16_RS05720 PF02772 S-adenosylmethionine synthetase, central domain PJ16_RS05720 PF02773 S-adenosylmethionine synthetase, C-terminal domain PJ16_RS05725 PF00375 Sodium:dicarboxylate symporter family PJ16_RS05730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PJ16_RS05730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PJ16_RS05735 PF08439 Oligopeptidase F PJ16_RS05735 PF01432 Peptidase family M3 PJ16_RS05745 PF13361 UvrD-like helicase C-terminal domain PJ16_RS05745 PF00580 UvrD/REP helicase N-terminal domain PJ16_RS05750 PF01509 TruB family pseudouridylate synthase (N terminal domain) PJ16_RS05755 PF02599 Global regulator protein family PJ16_RS05760 PF00288 GHMP kinases N terminal domain PJ16_RS05765 PF01668 SmpB protein PJ16_RS05775 PF02617 ATP-dependent Clp protease adaptor protein ClpS PJ16_RS05780 PF10431 C-terminal, D2-small domain, of ClpB protein PJ16_RS05780 PF07724 AAA domain (Cdc48 subfamily) PJ16_RS05780 PF02861 Clp amino terminal domain, pathogenicity island component PJ16_RS05780 PF00004 ATPase family associated with various cellular activities (AAA) PJ16_RS05780 PF17871 AAA lid domain PJ16_RS05785 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PJ16_RS05790 PF13426 PAS domain PJ16_RS05790 PF08447 PAS fold PJ16_RS05790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ16_RS05795 PF01914 MarC family integral membrane protein PJ16_RS05800 PF01641 SelR domain PJ16_RS05805 PF04305 Protein of unknown function (DUF455) PJ16_RS05810 PF01066 CDP-alcohol phosphatidyltransferase PJ16_RS05820 PF00004 ATPase family associated with various cellular activities (AAA) PJ16_RS05820 PF17862 AAA+ lid domain PJ16_RS05820 PF01434 Peptidase family M41 PJ16_RS05830 PF00072 Response regulator receiver domain PJ16_RS05840 PF02719 Polysaccharide biosynthesis protein PJ16_RS05845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PJ16_RS05855 PF00132 Bacterial transferase hexapeptide (six repeats) PJ16_RS05855 PF17836 PglD N-terminal domain PJ16_RS05860 PF02397 Bacterial sugar transferase PJ16_RS05865 PF13477 Glycosyl transferase 4-like PJ16_RS05865 PF00534 Glycosyl transferases group 1 PJ16_RS05870 PF18527 STT3/PglB C-terminal beta-barrel domain PJ16_RS05870 PF02516 Oligosaccharyl transferase STT3 subunit PJ16_RS05875 PF00534 Glycosyl transferases group 1 PJ16_RS05875 PF13439 Glycosyltransferase Family 4 PJ16_RS05880 PF00535 Glycosyl transferase family 2 PJ16_RS05885 PF00534 Glycosyl transferases group 1 PJ16_RS05885 PF13439 Glycosyltransferase Family 4 PJ16_RS05890 PF00005 ABC transporter PJ16_RS05890 PF00664 ABC transporter transmembrane region PJ16_RS05895 PF16363 GDP-mannose 4,6 dehydratase PJ16_RS05905 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PJ16_RS05910 PF03279 Bacterial lipid A biosynthesis acyltransferase PJ16_RS05915 PF00535 Glycosyl transferase family 2 PJ16_RS05920 PF00535 Glycosyl transferase family 2 PJ16_RS05920 PF01501 Glycosyl transferase family 8 PJ16_RS05930 PF00535 Glycosyl transferase family 2 PJ16_RS05930 PF01501 Glycosyl transferase family 8 PJ16_RS05935 PF01501 Glycosyl transferase family 8 PJ16_RS05935 PF00535 Glycosyl transferase family 2 PJ16_RS05940 PF06002 Alpha-2,3-sialyltransferase (CST-I) PJ16_RS05945 PF08666 SAF domain PJ16_RS05945 PF03102 NeuB family PJ16_RS05950 PF02350 UDP-N-acetylglucosamine 2-epimerase PJ16_RS05960 PF13472 GDSL-like Lipase/Acylhydrolase family PJ16_RS05960 PF02348 Cytidylyltransferase PJ16_RS05970 PF00535 Glycosyl transferase family 2 PJ16_RS05980 PF13580 SIS domain PJ16_RS05985 PF01467 Cytidylyltransferase-like PJ16_RS05985 PF00294 pfkB family carbohydrate kinase PJ16_RS05990 PF01370 NAD dependent epimerase/dehydratase family PJ16_RS05995 PF08645 Polynucleotide kinase 3 phosphatase PJ16_RS06010 PF00403 Heavy-metal-associated domain PJ16_RS06015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PJ16_RS06015 PF07497 Rho termination factor, RNA-binding domain PJ16_RS06015 PF07498 Rho termination factor, N-terminal domain PJ16_RS06020 PF12170 DNA polymerase III tau subunit V interacting with alpha PJ16_RS06020 PF12169 DNA polymerase III subunits gamma and tau domain III PJ16_RS06040 PF00403 Heavy-metal-associated domain PJ16_RS06060 PF06738 Putative threonine/serine exporter PJ16_RS06060 PF12821 Threonine/Serine exporter, ThrE PJ16_RS06070 PF00056 lactate/malate dehydrogenase, NAD binding domain PJ16_RS06070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PJ16_RS06075 PF09335 SNARE associated Golgi protein PJ16_RS06090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PJ16_RS06095 PF01709 Transcriptional regulator PJ16_RS06100 PF00893 Small Multidrug Resistance protein PJ16_RS06105 PF00893 Small Multidrug Resistance protein PJ16_RS06110 PF03485 Arginyl tRNA synthetase N terminal domain PJ16_RS06110 PF00750 tRNA synthetases class I (R) PJ16_RS06110 PF05746 DALR anticodon binding domain PJ16_RS06115 PF02416 mttA/Hcf106 family PJ16_RS06120 PF00625 Guanylate kinase PJ16_RS06130 PF01311 Bacterial export proteins, family 1 PJ16_RS06135 PF00005 ABC transporter PJ16_RS06140 PF00889 Elongation factor TS PJ16_RS06145 PF00318 Ribosomal protein S2 PJ16_RS06160 PF00032 Cytochrome b(C-terminal)/b6/petD PJ16_RS06160 PF00033 Cytochrome b/b6/petB PJ16_RS06165 PF00355 Rieske [2Fe-2S] domain PJ16_RS06165 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PJ16_RS06170 PF02040 Arsenical pump membrane protein PJ16_RS06295 PF10124 Mu-like prophage major head subunit gpT PJ16_RS06345 PF06074 Protein of unknown function (DUF935) PJ16_RS06435 PF01726 LexA DNA binding domain PJ16_RS06435 PF00717 Peptidase S24-like PJ16_RS06445 PF13932 GidA associated domain PJ16_RS06445 PF01134 Glucose inhibited division protein A PJ16_RS06455 PF08447 PAS fold PJ16_RS06455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ16_RS06455 PF13426 PAS domain PJ16_RS06465 PF00375 Sodium:dicarboxylate symporter family PJ16_RS06475 PF01384 Phosphate transporter family PJ16_RS06480 PF01979 Amidohydrolase family PJ16_RS06485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PJ16_RS06485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PJ16_RS06490 PF02637 GatB domain PJ16_RS06490 PF02934 GatB/GatE catalytic domain PJ16_RS06495 PF02664 S-Ribosylhomocysteinase (LuxS) PJ16_RS06500 PF03171 2OG-Fe(II) oxygenase superfamily PJ16_RS06500 PF14226 non-haem dioxygenase in morphine synthesis N-terminal PJ16_RS06505 PF03180 NLPA lipoprotein PJ16_RS06510 PF01717 Cobalamin-independent synthase, Catalytic domain PJ16_RS06510 PF08267 Cobalamin-independent synthase, N-terminal domain PJ16_RS06515 PF02219 Methylenetetrahydrofolate reductase PJ16_RS06525 PF00119 ATP synthase A chain PJ16_RS06530 PF18073 Rubredoxin metal binding domain PJ16_RS06535 PF00448 SRP54-type protein, GTPase domain PJ16_RS06550 PF12072 Domain of unknown function (DUF3552) PJ16_RS06550 PF01966 HD domain PJ16_RS06565 PF03631 Virulence factor BrkB PJ16_RS06570 PF01565 FAD binding domain PJ16_RS06570 PF02913 FAD linked oxidases, C-terminal domain PJ16_RS06580 PF08525 Opacity-associated protein A N-terminal motif PJ16_RS06580 PF01551 Peptidase family M23 PJ16_RS06580 PF01476 LysM domain PJ16_RS06590 PF02578 Multi-copper polyphenol oxidoreductase laccase PJ16_RS06595 PF00677 Lumazine binding domain PJ16_RS06605 PF00166 Chaperonin 10 Kd subunit PJ16_RS06610 PF00118 TCP-1/cpn60 chaperonin family PJ16_RS06615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ16_RS06620 PF00486 Transcriptional regulatory protein, C terminal PJ16_RS06620 PF00072 Response regulator receiver domain PJ16_RS06645 PF00072 Response regulator receiver domain PJ16_RS06645 PF00486 Transcriptional regulatory protein, C terminal PJ16_RS06650 PF00595 PDZ domain PJ16_RS06655 PF00226 DnaJ domain PJ16_RS06655 PF01556 DnaJ C terminal domain PJ16_RS06660 PF13411 MerR HTH family regulatory protein PJ16_RS06665 PF00999 Sodium/hydrogen exchanger family PJ16_RS06665 PF02254 TrkA-N domain PJ16_RS06675 PF13419 Haloacid dehalogenase-like hydrolase PJ16_RS06680 PF02092 Glycyl-tRNA synthetase beta subunit PJ16_RS06685 PF01551 Peptidase family M23 PJ16_RS06695 PF02541 Ppx/GppA phosphatase family PJ16_RS06700 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PJ16_RS06705 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PJ16_RS06715 PF07690 Major Facilitator Superfamily PJ16_RS06725 PF01208 Uroporphyrinogen decarboxylase (URO-D) PJ16_RS06730 PF04055 Radical SAM superfamily PJ16_RS06740 PF01541 GIY-YIG catalytic domain PJ16_RS06740 PF08459 UvrC Helix-hairpin-helix N-terminal PJ16_RS06740 PF02151 UvrB/uvrC motif PJ16_RS06750 PF02540 NAD synthase PJ16_RS06750 PF00958 GMP synthase C terminal domain PJ16_RS06750 PF00117 Glutamine amidotransferase class-I PJ16_RS06760 PF02844 Phosphoribosylglycinamide synthetase, N domain PJ16_RS06760 PF02843 Phosphoribosylglycinamide synthetase, C domain PJ16_RS06760 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PJ16_RS06775 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PJ16_RS06775 PF01138 3' exoribonuclease family, domain 1 PJ16_RS06775 PF03725 3' exoribonuclease family, domain 2 PJ16_RS06775 PF00575 S1 RNA binding domain PJ16_RS06775 PF00013 KH domain PJ16_RS06785 PF01361 Tautomerase enzyme PJ16_RS06795 PF07690 Major Facilitator Superfamily PJ16_RS06800 PF01451 Low molecular weight phosphotyrosine protein phosphatase PJ16_RS06805 PF05538 Campylobacter major outer membrane protein PJ16_RS06810 PF00226 DnaJ domain PJ16_RS06810 PF00684 DnaJ central domain PJ16_RS06810 PF01556 DnaJ C terminal domain PJ16_RS06815 PF00486 Transcriptional regulatory protein, C terminal PJ16_RS06815 PF00072 Response regulator receiver domain PJ16_RS06825 PF13662 Toprim domain PJ16_RS06825 PF02132 RecR protein PJ16_RS06830 PF01750 Hydrogenase maturation protease PJ16_RS06835 PF01292 Prokaryotic cytochrome b561 PJ16_RS06840 PF00374 Nickel-dependent hydrogenase PJ16_RS06845 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal PJ16_RS06845 PF10518 TAT (twin-arginine translocation) pathway signal sequence PJ16_RS06845 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PJ16_RS06850 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PJ16_RS06850 PF01266 FAD dependent oxidoreductase PJ16_RS06855 PF11741 AMIN domain PJ16_RS06855 PF01520 N-acetylmuramoyl-L-alanine amidase PJ16_RS06865 PF00579 tRNA synthetases class I (W and Y) PJ16_RS06870 PF13291 ACT domain PJ16_RS06870 PF04607 Region found in RelA / SpoT proteins PJ16_RS06870 PF02824 TGS domain PJ16_RS06875 PF01192 RNA polymerase Rpb6 PJ16_RS06880 PF00696 Amino acid kinase family PJ16_RS06895 PF09383 NIL domain PJ16_RS06895 PF00005 ABC transporter PJ16_RS06900 PF02390 Putative methyltransferase PJ16_RS06910 PF00849 RNA pseudouridylate synthase PJ16_RS06910 PF01479 S4 domain PJ16_RS06915 PF01098 Cell cycle protein PJ16_RS06925 PF00589 Phage integrase family PJ16_RS06925 PF13356 Arm DNA-binding domain PJ16_RS06940 PF10549 ORF11CD3 domain PJ16_RS06940 PF09669 Phage regulatory protein Rha (Phage_pRha) PJ16_RS06950 PF01555 DNA methylase PJ16_RS07035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PJ16_RS07035 PF14579 Helix-hairpin-helix motif PJ16_RS07035 PF02811 PHP domain PJ16_RS07035 PF11490 DNA polymerase III polC-type N-terminus II PJ16_RS07035 PF07733 Bacterial DNA polymerase III alpha NTPase domain PJ16_RS07035 PF00929 Exonuclease PJ16_RS07035 PF01336 OB-fold nucleic acid binding domain PJ16_RS07195 PF02386 Cation transport protein PJ16_RS07200 PF02254 TrkA-N domain PJ16_RS07200 PF02080 TrkA-C domain PJ16_RS07205 PF02621 Menaquinone biosynthesis PJ16_RS07215 PF03949 Malic enzyme, NAD binding domain PJ16_RS07215 PF01515 Phosphate acetyl/butaryl transferase PJ16_RS07215 PF00390 Malic enzyme, N-terminal domain PJ16_RS07220 PF00749 tRNA synthetases class I (E and Q), catalytic domain PJ16_RS07230 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PJ16_RS07230 PF02785 Biotin carboxylase C-terminal domain PJ16_RS07230 PF00289 Biotin carboxylase, N-terminal domain PJ16_RS07235 PF00364 Biotin-requiring enzyme PJ16_RS07240 PF00692 dUTPase PJ16_RS07245 PF02719 Polysaccharide biosynthesis protein PJ16_RS07250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PJ16_RS07255 PF16221 winged helix-turn-helix PJ16_RS07255 PF09940 Domain of unknown function (DUF2172) PJ16_RS07255 PF16254 Domain of unknown function (DUF4910) PJ16_RS07290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJ16_RS07290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PJ16_RS07305 PF02348 Cytidylyltransferase PJ16_RS07315 PF13302 Acetyltransferase (GNAT) domain PJ16_RS07320 PF00977 Histidine biosynthesis protein PJ16_RS07325 PF00117 Glutamine amidotransferase class-I PJ16_RS07335 PF03102 NeuB family PJ16_RS07335 PF08666 SAF domain PJ16_RS07345 PF16363 GDP-mannose 4,6 dehydratase PJ16_RS07350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PJ16_RS07380 PF08666 SAF domain PJ16_RS07380 PF03102 NeuB family PJ16_RS07385 PF02350 UDP-N-acetylglucosamine 2-epimerase PJ16_RS07390 PF00483 Nucleotidyl transferase PJ16_RS07400 PF02348 Cytidylyltransferase PJ16_RS07435 PF07196 Flagellin hook IN motif PJ16_RS07435 PF00700 Bacterial flagellin C-terminal helical region PJ16_RS07435 PF00669 Bacterial flagellin N-terminal helical region PJ16_RS07455 PF07963 Prokaryotic N-terminal methylation motif PJ16_RS07455 PF08334 Type II secretion system (T2SS), protein G PJ16_RS07460 PF00814 Glycoprotease family PJ16_RS07470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PJ16_RS07470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PJ16_RS07470 PF13288 DXP reductoisomerase C-terminal domain PJ16_RS07485 PF05670 NFACT protein RNA binding domain PJ16_RS07490 PF12804 MobA-like NTP transferase domain PJ16_RS07495 PF02253 Phospholipase A1 PJ16_RS07500 PF01032 FecCD transport family PJ16_RS07505 PF01032 FecCD transport family PJ16_RS07510 PF00005 ABC transporter PJ16_RS07515 PF01497 Periplasmic binding protein PJ16_RS07530 PF02335 Cytochrome c552 PJ16_RS07535 PF03264 NapC/NirT cytochrome c family, N-terminal region PJ16_RS07540 PF13090 Polyphosphate kinase C-terminal domain 2 PJ16_RS07540 PF17941 Polyphosphate kinase C-terminal domain 1 PJ16_RS07540 PF13089 Polyphosphate kinase N-terminal domain PJ16_RS07540 PF02503 Polyphosphate kinase middle domain PJ16_RS07550 PF17864 RuvB AAA lid domain PJ16_RS07550 PF05496 Holliday junction DNA helicase RuvB P-loop domain PJ16_RS07550 PF05491 RuvB C-terminal winged helix domain PJ16_RS07555 PF01594 AI-2E family transporter PJ16_RS07560 PF00206 Lyase PJ16_RS07560 PF10415 Fumarase C C-terminus PJ16_RS07565 PF00082 Subtilase family PJ16_RS07565 PF12951 Passenger-associated-transport-repeat PJ16_RS07565 PF03797 Autotransporter beta-domain PJ16_RS07570 PF01380 SIS domain PJ16_RS07580 PF04055 Radical SAM superfamily PJ16_RS07585 PF00860 Permease family PJ16_RS07590 PF00156 Phosphoribosyl transferase domain PJ16_RS07595 PF04333 MlaA lipoprotein PJ16_RS07610 PF01725 Ham1 family PJ16_RS07615 PF07690 Major Facilitator Superfamily PJ16_RS07630 PF03841 L-seryl-tRNA selenium transferase PJ16_RS07635 PF00009 Elongation factor Tu GTP binding domain PJ16_RS07635 PF03144 Elongation factor Tu domain 2 PJ16_RS07635 PF09106 Elongation factor SelB, winged helix PJ16_RS07635 PF09107 Elongation factor SelB, winged helix PJ16_RS07640 PF13098 Thioredoxin-like domain PJ16_RS07650 PF00258 Flavodoxin PJ16_RS07665 PF06628 Catalase-related immune-responsive PJ16_RS07665 PF00199 Catalase PJ16_RS07675 PF08348 YheO-like PAS domain PJ16_RS07675 PF13309 HTH domain PJ16_RS07680 PF01042 Endoribonuclease L-PSP PJ16_RS07685 PF03606 C4-dicarboxylate anaerobic carrier PJ16_RS07690 PF03606 C4-dicarboxylate anaerobic carrier PJ16_RS07695 PF03606 C4-dicarboxylate anaerobic carrier PJ16_RS07705 PF01053 Cys/Met metabolism PLP-dependent enzyme PJ16_RS07710 PF00206 Lyase PJ16_RS07710 PF10397 Adenylosuccinate lyase C-terminus PJ16_RS07720 PF04023 FeoA domain PJ16_RS07730 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal PJ16_RS07730 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PJ16_RS07730 PF10518 TAT (twin-arginine translocation) pathway signal sequence PJ16_RS07740 PF00121 Triosephosphate isomerase PJ16_RS07745 PF00162 Phosphoglycerate kinase PJ16_RS07750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PJ16_RS07750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PJ16_RS07755 PF01467 Cytidylyltransferase-like PJ16_RS07770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PJ16_RS07770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PJ16_RS07770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PJ16_RS07770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PJ16_RS07775 PF03748 Flagellar basal body-associated protein FliL PJ16_RS07780 PF01648 4'-phosphopantetheinyl transferase superfamily PJ16_RS07790 PF00067 Cytochrome P450 PJ16_RS07800 PF05159 Capsule polysaccharide biosynthesis protein PJ16_RS07805 PF05159 Capsule polysaccharide biosynthesis protein PJ16_RS07815 PF00483 Nucleotidyl transferase PJ16_RS07820 PF00117 Glutamine amidotransferase class-I PJ16_RS07825 PF00391 PEP-utilising enzyme, mobile domain PJ16_RS07825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PJ16_RS07830 PF01209 ubiE/COQ5 methyltransferase family PJ16_RS07850 PF00483 Nucleotidyl transferase PJ16_RS07855 PF13580 SIS domain PJ16_RS07860 PF00288 GHMP kinases N terminal domain PJ16_RS07860 PF08544 GHMP kinases C terminal PJ16_RS07870 PF01370 NAD dependent epimerase/dehydratase family PJ16_RS07875 PF01370 NAD dependent epimerase/dehydratase family PJ16_RS07885 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PJ16_RS07905 PF00535 Glycosyl transferase family 2 PJ16_RS07915 PF00155 Aminotransferase class I and II PJ16_RS07920 PF00155 Aminotransferase class I and II PJ16_RS07925 PF00535 Glycosyl transferase family 2 PJ16_RS07930 PF03275 UDP-galactopyranose mutase PJ16_RS07935 PF00535 Glycosyl transferase family 2 PJ16_RS07935 PF01501 Glycosyl transferase family 8 PJ16_RS07940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PJ16_RS07940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PJ16_RS07950 PF00571 CBS domain PJ16_RS07950 PF01380 SIS domain PJ16_RS07955 PF10531 SLBB domain PJ16_RS07955 PF02563 Polysaccharide biosynthesis/export protein PJ16_RS07965 PF00005 ABC transporter PJ16_RS07970 PF01061 ABC-2 type transporter PJ16_RS07995 PF01171 PP-loop family PJ16_RS08000 PF04055 Radical SAM superfamily PJ16_RS08000 PF00919 Uncharacterized protein family UPF0004 PJ16_RS08005 PF00472 RF-1 domain PJ16_RS08005 PF03462 PCRF domain PJ16_RS08015 PF01142 tRNA pseudouridine synthase D (TruD) PJ16_RS08020 PF02769 AIR synthase related protein, C-terminal domain PJ16_RS08020 PF00586 AIR synthase related protein, N-terminal domain PJ16_RS08040 PF02119 Flagellar P-ring protein PJ16_RS08060 PF07196 Flagellin hook IN motif PJ16_RS08060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ16_RS08070 PF01925 Sulfite exporter TauE/SafE PJ16_RS08075 PF00482 Type II secretion system (T2SS), protein F PJ16_RS08080 PF00437 Type II/IV secretion system protein PJ16_RS08095 PF00263 Bacterial type II and III secretion system protein PJ16_RS08095 PF07655 Secretin N-terminal domain PJ16_RS08105 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PJ16_RS08105 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PJ16_RS08105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PJ16_RS08105 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PJ16_RS08105 PF10371 Domain of unknown function PJ16_RS08110 PF13419 Haloacid dehalogenase-like hydrolase PJ16_RS08115 PF05736 OprF membrane domain PJ16_RS08115 PF00691 OmpA family PJ16_RS08120 PF00380 Ribosomal protein S9/S16 PJ16_RS08125 PF00572 Ribosomal protein L13 PJ16_RS08130 PF13361 UvrD-like helicase C-terminal domain PJ16_RS08130 PF00580 UvrD/REP helicase N-terminal domain PJ16_RS08135 PF12705 PD-(D/E)XK nuclease superfamily PJ16_RS08160 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PJ16_RS08160 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PJ16_RS08175 PF00115 Cytochrome C and Quinol oxidase polypeptide I PJ16_RS08180 PF00072 Response regulator receiver domain PJ16_RS08180 PF00486 Transcriptional regulatory protein, C terminal PJ16_RS08185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ16_RS08185 PF08448 PAS fold PJ16_RS08185 PF08447 PAS fold PJ16_RS08195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PJ16_RS08195 PF00117 Glutamine amidotransferase class-I PJ16_RS08215 PF00709 Adenylosuccinate synthetase PJ16_RS08225 PF04143 Sulphur transport PJ16_RS08230 PF01206 Sulfurtransferase TusA PJ16_RS08235 PF00474 Sodium:solute symporter family PJ16_RS08240 PF00171 Aldehyde dehydrogenase family PJ16_RS08240 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PJ16_RS08240 PF14850 DNA-binding domain of Proline dehydrogenase PJ16_RS08240 PF01619 Proline dehydrogenase PJ16_RS08245 PF02769 AIR synthase related protein, C-terminal domain PJ16_RS08245 PF00586 AIR synthase related protein, N-terminal domain PJ16_RS08255 PF13426 PAS domain PJ16_RS08255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ16_RS08255 PF08447 PAS fold PJ16_RS08265 PF02634 FdhD/NarQ family PJ16_RS08275 PF13247 4Fe-4S dicluster domain PJ16_RS08280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJ16_RS08280 PF00384 Molybdopterin oxidoreductase PJ16_RS08280 PF01568 Molydopterin dinucleotide binding domain PJ16_RS08285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJ16_RS08285 PF00384 Molybdopterin oxidoreductase PJ16_RS08285 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PJ16_RS08285 PF01568 Molydopterin dinucleotide binding domain PJ16_RS08285 PF00037 4Fe-4S binding domain PJ16_RS08300 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PJ16_RS08305 PF07731 Multicopper oxidase PJ16_RS08305 PF07732 Multicopper oxidase PJ16_RS08315 PF02391 MoaE protein PJ16_RS08320 PF03454 MoeA C-terminal region (domain IV) PJ16_RS08320 PF03453 MoeA N-terminal region (domain I and II) PJ16_RS08320 PF00994 Probable molybdopterin binding domain PJ16_RS08325 PF09827 CRISPR associated protein Cas2 PJ16_RS08330 PF01867 CRISPR associated protein Cas1 PJ16_RS08335 PF18541 RuvC endonuclease subdomain 3 PJ16_RS08335 PF13395 HNH endonuclease PJ16_RS08350 PF03606 C4-dicarboxylate anaerobic carrier PJ16_RS08355 PF02769 AIR synthase related protein, C-terminal domain PJ16_RS08355 PF00586 AIR synthase related protein, N-terminal domain PJ16_RS08360 PF01121 Dephospho-CoA kinase PJ16_RS08365 PF01678 Diaminopimelate epimerase PJ16_RS08370 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PJ16_RS08380 PF00210 Ferritin-like domain PJ16_RS08385 PF00342 Phosphoglucose isomerase PJ16_RS08390 PF00483 Nucleotidyl transferase PJ16_RS08395 PF00501 AMP-binding enzyme PJ16_RS08395 PF16177 Acetyl-coenzyme A synthetase N-terminus PJ16_RS08395 PF13193 AMP-binding enzyme C-terminal domain PJ16_RS08400 PF00005 ABC transporter PJ16_RS08405 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS08410 PF12849 PBP superfamily domain PJ16_RS08415 PF03746 LamB/YcsF family PJ16_RS08420 PF02682 Carboxyltransferase domain, subdomain C and D PJ16_RS08425 PF02626 Carboxyltransferase domain, subdomain A and B PJ16_RS08435 PF02525 Flavodoxin-like fold PJ16_RS08440 PF01638 HxlR-like helix-turn-helix PJ16_RS08450 PF08240 Alcohol dehydrogenase GroES-like domain PJ16_RS08450 PF00107 Zinc-binding dehydrogenase PJ16_RS08455 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PJ16_RS08455 PF11867 Domain of unknown function (DUF3387) PJ16_RS08455 PF18766 SWI2/SNF2 ATPase PJ16_RS08475 PF02384 N-6 DNA Methylase PJ16_RS08480 PF13460 NAD(P)H-binding PJ16_RS08485 PF01638 HxlR-like helix-turn-helix PJ16_RS08505 PF00672 HAMP domain PJ16_RS08505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ16_RS08505 PF17200 Single Cache domain 2 PJ16_RS08515 PF00361 Proton-conducting membrane transporter PJ16_RS08520 PF00361 Proton-conducting membrane transporter PJ16_RS08525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PJ16_RS08525 PF00361 Proton-conducting membrane transporter PJ16_RS08530 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PJ16_RS08535 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PJ16_RS08540 PF12838 4Fe-4S dicluster domain PJ16_RS08545 PF00146 NADH dehydrogenase PJ16_RS08550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PJ16_RS08550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJ16_RS08550 PF00384 Molybdopterin oxidoreductase PJ16_RS08550 PF12838 4Fe-4S dicluster domain PJ16_RS08550 PF01568 Molydopterin dinucleotide binding domain PJ16_RS08565 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PJ16_RS08570 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PJ16_RS08575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PJ16_RS08580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PJ16_RS08585 PF00005 ABC transporter PJ16_RS08585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PJ16_RS08590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PJ16_RS08590 PF00005 ABC transporter PJ16_RS08595 PF12911 N-terminal TM domain of oligopeptide transport permease C PJ16_RS08595 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS08600 PF00528 Binding-protein-dependent transport system inner membrane component PJ16_RS08605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PJ16_RS08610 PF02913 FAD linked oxidases, C-terminal domain PJ16_RS08610 PF01565 FAD binding domain PJ16_RS08615 PF00175 Oxidoreductase NAD-binding domain PJ16_RS08615 PF00042 Globin PJ16_RS08615 PF00970 Oxidoreductase FAD-binding domain PJ16_RS08620 PF00005 ABC transporter PJ16_RS08625 PF07690 Major Facilitator Superfamily PJ16_RS08630 PF00753 Metallo-beta-lactamase superfamily PJ16_RS08635 PF01176 Translation initiation factor 1A / IF-1 PJ16_RS08640 PF00444 Ribosomal protein L36 PJ16_RS08645 PF00416 Ribosomal protein S13/S18 PJ16_RS08650 PF00411 Ribosomal protein S11 PJ16_RS08655 PF01479 S4 domain PJ16_RS08655 PF00163 Ribosomal protein S4/S9 N-terminal domain PJ16_RS08660 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PJ16_RS08660 PF01000 RNA polymerase Rpb3/RpoA insert domain PJ16_RS08660 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PJ16_RS08665 PF01196 Ribosomal protein L17 PJ16_RS08670 PF01634 ATP phosphoribosyltransferase PJ16_RS08670 PF08029 HisG, C-terminal domain PJ16_RS08675 PF00815 Histidinol dehydrogenase PJ16_RS08680 PF00475 Imidazoleglycerol-phosphate dehydratase PJ16_RS08680 PF08645 Polynucleotide kinase 3 phosphatase PJ16_RS08685 PF00117 Glutamine amidotransferase class-I PJ16_RS08690 PF00977 Histidine biosynthesis protein PJ16_RS08700 PF00977 Histidine biosynthesis protein PJ16_RS08705 PF01502 Phosphoribosyl-AMP cyclohydrolase PJ16_RS08705 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PJ16_RS08710 PF14602 Hexapeptide repeat of succinyl-transferase PJ16_RS08710 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PJ16_RS08715 PF01883 Iron-sulfur cluster assembly protein PJ16_RS08715 PF10609 NUBPL iron-transfer P-loop NTPase PJ16_RS08720 PF02542 YgbB family PJ16_RS08720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PJ16_RS08730 PF01747 ATP-sulfurylase PJ16_RS08730 PF14306 PUA-like domain PJ16_RS08735 PF04608 Phosphatidylglycerophosphatase A PJ16_RS08740 PF01649 Ribosomal protein S20 PJ16_RS08745 PF00472 RF-1 domain PJ16_RS08745 PF03462 PCRF domain PJ16_RS08750 PF10615 Protein of unknown function (DUF2470) PJ16_RS08750 PF01243 Pyridoxamine 5'-phosphate oxidase PJ16_RS08755 PF07715 TonB-dependent Receptor Plug Domain PJ16_RS08755 PF00593 TonB dependent receptor PJ16_RS08760 PF01032 FecCD transport family PJ16_RS08765 PF00005 ABC transporter PJ16_RS08770 PF01497 Periplasmic binding protein PJ16_RS08780 PF00083 Sugar (and other) transporter PJ16_RS08785 PF14815 NUDIX domain PJ16_RS08785 PF00730 HhH-GPD superfamily base excision DNA repair protein PJ16_RS08815 PF01872 RibD C-terminal domain PJ16_RS08815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PJ16_RS08825 PF03313 Serine dehydratase alpha chain PJ16_RS08825 PF03315 Serine dehydratase beta chain PJ16_RS08845 PF01618 MotA/TolQ/ExbB proton channel family PJ16_RS08850 PF02472 Biopolymer transport protein ExbD/TolR PJ16_RS08875 PF01264 Chorismate synthase PJ16_RS08880 PF00035 Double-stranded RNA binding motif PJ16_RS08880 PF14622 Ribonuclease-III-like PJ16_RS08885 PF00075 RNase H PJ16_RS08895 PF08275 DNA primase catalytic core, N-terminal domain PJ16_RS08895 PF01807 CHC2 zinc finger PJ16_RS08910 PF02875 Mur ligase family, glutamate ligase domain PJ16_RS08910 PF08245 Mur ligase middle domain PJ16_RS08915 PF02575 YbaB/EbfC DNA-binding family PJ16_RS08925 PF00348 Polyprenyl synthetase PJ16_RS08930 PF00456 Transketolase, thiamine diphosphate binding domain PJ16_RS08930 PF02779 Transketolase, pyrimidine binding domain PJ16_RS08930 PF02780 Transketolase, C-terminal domain PJ16_RS08935 PF02405 Permease MlaE PJ16_RS08940 PF00005 ABC transporter PJ16_RS08950 PF03886 ABC-type transport auxiliary lipoprotein component PJ16_RS08950 PF02470 MlaD protein PJ16_RS08960 PF00557 Metallopeptidase family M24 PJ16_RS08965 PF01177 Asp/Glu/Hydantoin racemase PJ16_RS08970 PF00877 NlpC/P60 family PJ16_RS08975 PF06965 Na+/H+ antiporter 1 PJ16_RS08980 PF06965 Na+/H+ antiporter 1 PJ16_RS08990 PF03239 Iron permease FTR1 family PJ16_RS08995 PF10634 Fe2+ transport protein PJ16_RS09015 PF00005 ABC transporter PJ16_RS09070 PF14743 DNA ligase OB-like domain PJ16_RS09070 PF01068 ATP dependent DNA ligase domain PJ16_RS09085 PF03952 Enolase, N-terminal domain PJ16_RS09085 PF00113 Enolase, C-terminal TIM barrel domain PJ16_RS09090 PF00154 recA bacterial DNA recombination protein PJ16_RS09095 PF02621 Menaquinone biosynthesis PJ16_RS09100 PF01313 Bacterial export proteins, family 3 PJ16_RS09105 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PJ16_RS09130 PF00459 Inositol monophosphatase family PJ16_RS09135 PF00285 Citrate synthase, C-terminal domain PJ16_RS09145 PF06968 Biotin and Thiamin Synthesis associated domain PJ16_RS09145 PF04055 Radical SAM superfamily PJ16_RS09150 PF01131 DNA topoisomerase PJ16_RS09150 PF01751 Toprim domain PJ16_RS09150 PF01396 Topoisomerase DNA binding C4 zinc finger PJ16_RS09160 PF00344 SecY translocase PJ16_RS09165 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PJ16_RS09170 PF03719 Ribosomal protein S5, C-terminal domain PJ16_RS09170 PF00333 Ribosomal protein S5, N-terminal domain PJ16_RS09175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PJ16_RS09180 PF00347 Ribosomal protein L6 PJ16_RS09185 PF00410 Ribosomal protein S8 PJ16_RS09190 PF00253 Ribosomal protein S14p/S29e PJ16_RS09195 PF00281 Ribosomal protein L5 PJ16_RS09195 PF00673 ribosomal L5P family C-terminus PJ16_RS09200 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PJ16_RS09200 PF00467 KOW motif PJ16_RS09205 PF00238 Ribosomal protein L14p/L23e PJ16_RS09210 PF00366 Ribosomal protein S17 PJ16_RS09215 PF00831 Ribosomal L29 protein PJ16_RS09220 PF00252 Ribosomal protein L16p/L10e PJ16_RS09225 PF07650 KH domain PJ16_RS09225 PF00189 Ribosomal protein S3, C-terminal domain PJ16_RS09230 PF00237 Ribosomal protein L22p/L17e PJ16_RS09235 PF00203 Ribosomal protein S19 PJ16_RS09240 PF03947 Ribosomal Proteins L2, C-terminal domain PJ16_RS09240 PF00181 Ribosomal Proteins L2, RNA binding domain PJ16_RS09245 PF00276 Ribosomal protein L23 PJ16_RS09250 PF00573 Ribosomal protein L4/L1 family PJ16_RS09255 PF00297 Ribosomal protein L3 PJ16_RS09260 PF00338 Ribosomal protein S10p/S20e PJ16_RS09265 PF01479 S4 domain PJ16_RS09265 PF00849 RNA pseudouridylate synthase PJ16_RS09270 PF00753 Metallo-beta-lactamase superfamily PJ16_RS09270 PF17770 Ribonuclease J C-terminal domain PJ16_RS09270 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PJ16_RS09275 PF00398 Ribosomal RNA adenine dimethylase PJ16_RS09285 PF04055 Radical SAM superfamily PJ16_RS09320 PF00694 Aconitase C-terminal domain PJ16_RS09325 PF00330 Aconitase family (aconitate hydratase) PJ16_RS09330 PF00180 Isocitrate/isopropylmalate dehydrogenase PJ16_RS09335 PF00682 HMGL-like PJ16_RS09335 PF08502 LeuA allosteric (dimerisation) domain PJ16_RS09350 PF14489 QueF-like protein PJ16_RS09360 PF07196 Flagellin hook IN motif PJ16_RS09360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ16_RS09360 PF07559 Flagellar basal body protein FlaE PJ16_RS09360 PF00460 Flagella basal body rod protein PJ16_RS09365 PF02075 Crossover junction endodeoxyribonuclease RuvC PJ16_RS09420 PF13726 Na+-H+ antiporter family PJ16_RS09420 PF03553 Na+/H+ antiporter family PJ16_RS09435 PF04898 Glutamate synthase central domain PJ16_RS09435 PF01645 Conserved region in glutamate synthase PJ16_RS09435 PF01493 GXGXG motif PJ16_RS09435 PF00310 Glutamine amidotransferases class-II PJ16_RS09440 PF01493 GXGXG motif PJ16_RS09440 PF01645 Conserved region in glutamate synthase PJ16_RS09440 PF04898 Glutamate synthase central domain PJ16_RS09440 PF00310 Glutamine amidotransferases class-II PJ16_RS09490 PF00920 Dehydratase family PJ16_RS09495 PF00920 Dehydratase family PJ16_RS09590 PF17768 RecJ OB domain PJ16_RS09590 PF02272 DHHA1 domain PJ16_RS09590 PF01368 DHH family PJ16_RS09700 PF01493 GXGXG motif PJ16_RS09700 PF00310 Glutamine amidotransferases class-II PJ16_RS09700 PF04898 Glutamate synthase central domain PJ16_RS09700 PF01645 Conserved region in glutamate synthase PJ16_RS09775 PF06508 Queuosine biosynthesis protein QueC PJ16_RS09820 PF00317 Ribonucleotide reductase, all-alpha domain PJ16_RS09820 PF02867 Ribonucleotide reductase, barrel domain PJ16_RS09820 PF03477 ATP cone domain PJ16_RS09830 PF00317 Ribonucleotide reductase, all-alpha domain PJ16_RS09830 PF02867 Ribonucleotide reductase, barrel domain PJ16_RS09830 PF03477 ATP cone domain PJ16_RS09835 PF00317 Ribonucleotide reductase, all-alpha domain PJ16_RS09835 PF02867 Ribonucleotide reductase, barrel domain PJ16_RS09835 PF03477 ATP cone domain PJ16_RS09875 PF06418 CTP synthase N-terminus PJ16_RS09875 PF00117 Glutamine amidotransferase class-I PJ16_RS09885 PF00171 Aldehyde dehydrogenase family