N565_RS00005	SM00382	ATPases associated with a variety of cellular activities
N565_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
N565_RS00010	SM00480	DNA polymerase III beta subunit
N565_RS00015	SM00387	Histidine kinase-like ATPases
N565_RS00015	SM00433	TopoisomeraseII
N565_RS00055	SM00278	Helix-hairpin-helix DNA-binding motif class 1
N565_RS00095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS00115	SM00998	Adenylosuccinate lyase C-terminus
N565_RS00145	SM00870	N565_RS00145
N565_RS00330	SM00382	ATPases associated with a variety of cellular activities
N565_RS00330	SM00962	SRP54-type protein, GTPase domain
N565_RS00435	SM00986	Uracil DNA glycosylase superfamily
N565_RS00435	SM00987	UreE urease accessory protein, C-terminal domain 
N565_RS00510	SM00470	ParB-like nuclease domain
N565_RS00540	SM00382	ATPases associated with a variety of cellular activities
N565_RS00585	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
N565_RS00715	SM00382	ATPases associated with a variety of cellular activities
N565_RS00725	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS00805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS00805	SM01204	N565_RS00805
N565_RS00845	SM00947	Carbonic anhydrase
N565_RS00910	SM00859	Semialdehyde dehydrogenase, NAD binding domain
N565_RS00950	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
N565_RS00990	SM00382	ATPases associated with a variety of cellular activities
N565_RS01005	SM00382	ATPases associated with a variety of cellular activities
N565_RS01065	SM00116	Domain in cystathionine beta-synthase and other proteins.
N565_RS01065	SM01091	Transporter associated domain
N565_RS01115	SM00382	ATPases associated with a variety of cellular activities
N565_RS01170	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS01210	SM00967	RNA 2'-O ribose methyltransferase substrate binding
N565_RS01255	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS01285	SM00244	prohibitin homologues
N565_RS01320	SM00382	ATPases associated with a variety of cellular activities
N565_RS01320	SM00994	ClpX C4-type zinc finger
N565_RS01320	SM01086	C-terminal, D2-small domain, of ClpB protein
N565_RS01335	SM00851	MGS-like domain
N565_RS01335	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
N565_RS01355	SM00260	Two component signalling adaptor domain
N565_RS01360	SM00073	Histidine Phosphotransfer domain
N565_RS01360	SM00260	Two component signalling adaptor domain
N565_RS01360	SM00387	Histidine kinase-like ATPases
N565_RS01360	SM00448	cheY-homologous receiver domain
N565_RS01360	SM01231	N565_RS01360
N565_RS01365	SM00260	Two component signalling adaptor domain
N565_RS01365	SM00448	cheY-homologous receiver domain
N565_RS01715	SM00382	ATPases associated with a variety of cellular activities
N565_RS01795	SM00830	Chorismate mutase type II
N565_RS01820	SM00861	Transketolase, pyrimidine binding domain
N565_RS01875	SM00562	N565_RS01875
N565_RS01905	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
N565_RS01905	SM00474	3'-5' exonuclease
N565_RS01905	SM00475	5'-3' exonuclease
N565_RS01905	SM00479	N565_RS01905
N565_RS01905	SM00482	DNA polymerase A domain
N565_RS01990	SM00448	cheY-homologous receiver domain
N565_RS01990	SM00862	Transcriptional regulatory protein, C terminal
N565_RS01995	SM00905	Dihydroneopterin aldolase
N565_RS02000	SM01207	N565_RS02000
N565_RS02025	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS02095	SM00382	ATPases associated with a variety of cellular activities
N565_RS02115	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
N565_RS02160	SM00028	Tetratricopeptide repeats
N565_RS02275	SM00671	Sel1-like repeats.
N565_RS02310	SM00867	YceI-like domain 
N565_RS02340	SM00382	ATPases associated with a variety of cellular activities
N565_RS02415	SM00822	N565_RS02415
N565_RS02450	SM00825	Beta-ketoacyl synthase
N565_RS02470	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS02490	SM00479	N565_RS02490
N565_RS02520	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS02530	SM00316	Ribosomal protein S1-like RNA-binding domain
N565_RS02550	SM00487	DEAD-like helicases superfamily
N565_RS02550	SM00490	helicase superfamily c-terminal domain
N565_RS02560	SM00100	Cyclic nucleotide-monophosphate binding domain
N565_RS02575	SM00382	ATPases associated with a variety of cellular activities
N565_RS02620	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
N565_RS02620	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
N565_RS02625	SM00649	Ribosomal protein L11/L12
N565_RS02650	SM00663	RNA polymerase I subunit A N-terminus
N565_RS02655	SM00346	helix_turn_helix isocitrate lyase regulation
N565_RS02660	SM01130	N565_RS02660
N565_RS02665	SM00858	N565_RS02665
N565_RS02715	SM00838	Elongation factor G C-terminus
N565_RS02715	SM00889	Elongation factor G, domain IV
N565_RS02755	SM00450	Rhodanese Homology Domain
N565_RS02785	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
N565_RS02800	SM00382	ATPases associated with a variety of cellular activities
N565_RS02800	SM01086	C-terminal, D2-small domain, of ClpB protein
N565_RS02810	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
N565_RS02810	SM00245	tail specific protease
N565_RS02825	SM01211	N565_RS02825
N565_RS02835	SM00563	Phosphate acyltransferases
N565_RS02845	SM00387	Histidine kinase-like ATPases
N565_RS02850	SM00450	Rhodanese Homology Domain
N565_RS02920	SM00881	CoA binding domain
N565_RS03005	SM00841	Elongation factor P, C-terminal
N565_RS03005	SM01185	N565_RS03005
N565_RS03060	SM00382	ATPases associated with a variety of cellular activities
N565_RS03160	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS03190	SM00292	breast cancer carboxy-terminal domain
N565_RS03190	SM00532	Ligase N family
N565_RS03205	SM00904	Riboflavin kinase
N565_RS03230	SM00477	DNA/RNA non-specific endonuclease
N565_RS03230	SM00892	DNA/RNA non-specific endonuclease
N565_RS03235	SM00478	endonuclease III
N565_RS03235	SM00525	N565_RS03235
N565_RS03295	SM00382	ATPases associated with a variety of cellular activities
N565_RS03340	SM00382	ATPases associated with a variety of cellular activities
N565_RS03395	SM00869	Autotransporter beta-domain
N565_RS03405	SM00955	N565_RS03405
N565_RS03425	SM00732	Likely ribonuclease with RNase H fold.
N565_RS03465	SM00267	diguanylate cyclase
N565_RS03465	SM00448	cheY-homologous receiver domain
N565_RS03475	SM00257	Lysin motif
N565_RS03545	SM00382	ATPases associated with a variety of cellular activities
N565_RS03545	SM01086	C-terminal, D2-small domain, of ClpB protein
N565_RS03565	SM00363	S4 RNA-binding domain
N565_RS03575	SM00382	ATPases associated with a variety of cellular activities
N565_RS03625	SM00487	DEAD-like helicases superfamily
N565_RS03625	SM00490	helicase superfamily c-terminal domain
N565_RS03645	SM00487	DEAD-like helicases superfamily
N565_RS03645	SM00490	helicase superfamily c-terminal domain
N565_RS03700	SM00842	Cell division protein FtsA
N565_RS03705	SM00864	Tubulin/FtsZ family, GTPase domain
N565_RS03705	SM00865	Tubulin/FtsZ family, C-terminal domain
N565_RS03720	SM01230	N565_RS03720
N565_RS03735	SM01001	AIR carboxylase
N565_RS03770	SM00382	ATPases associated with a variety of cellular activities
N565_RS03770	SM00962	SRP54-type protein, GTPase domain
N565_RS03770	SM00963	SRP54-type protein, helical bundle domain
N565_RS03800	SM00095	Transthyretin
N565_RS03815	SM00481	DNA polymerase alpha chain like domain
N565_RS03850	SM00852	Probable molybdopterin binding domain
N565_RS03895	SM00062	Bacterial periplasmic substrate-binding proteins
N565_RS03910	SM00912	haemagglutination activity domain
N565_RS04080	SM00382	ATPases associated with a variety of cellular activities
N565_RS04080	SM00930	N565_RS04080
N565_RS04110	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
N565_RS04175	SM00387	Histidine kinase-like ATPases
N565_RS04175	SM00388	His Kinase A (phosphoacceptor) domain
N565_RS04205	SM00278	Helix-hairpin-helix DNA-binding motif class 1
N565_RS04220	SM00840	N565_RS04220
N565_RS04225	SM00382	ATPases associated with a variety of cellular activities
N565_RS04240	SM01130	N565_RS04240
N565_RS04255	SM00849	Metallo-beta-lactamase superfamily
N565_RS04290	SM00062	Bacterial periplasmic substrate-binding proteins
N565_RS04290	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
N565_RS04350	SM00881	CoA binding domain
N565_RS04375	SM00248	ankyrin repeats
N565_RS04490	SM00852	Probable molybdopterin binding domain
N565_RS04600	SM01387	N565_RS04600
N565_RS04605	SM00843	N565_RS04605
N565_RS04625	SM00382	ATPases associated with a variety of cellular activities
N565_RS04630	SM00387	Histidine kinase-like ATPases
N565_RS04630	SM00388	His Kinase A (phosphoacceptor) domain
N565_RS04635	SM00448	cheY-homologous receiver domain
N565_RS04635	SM00862	Transcriptional regulatory protein, C terminal
N565_RS04650	SM00316	Ribosomal protein S1-like RNA-binding domain
N565_RS04665	SM00873	B3/4 domain
N565_RS04665	SM00874	tRNA synthetase B5 domain
N565_RS04665	SM00896	Ferredoxin-fold anticodon binding domain
N565_RS04695	SM00382	ATPases associated with a variety of cellular activities
N565_RS04710	SM01005	Alanine racemase, C-terminal domain
N565_RS04745	SM00411	bacterial (prokaryotic) histone like domain
N565_RS04770	SM01400	N565_RS04770
N565_RS04785	SM00062	Bacterial periplasmic substrate-binding proteins
N565_RS04790	SM00382	ATPases associated with a variety of cellular activities
N565_RS04795	SM00138	Methyltransferase, chemotaxis proteins 
N565_RS04875	SM00563	Phosphate acyltransferases
N565_RS04930	SM00957	SecA DEAD-like domain
N565_RS04930	SM00958	SecA preprotein cross-linking domain
N565_RS04945	SM00382	ATPases associated with a variety of cellular activities
N565_RS04975	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS04985	SM00798	AICARFT/IMPCHase bienzyme
N565_RS04985	SM00851	MGS-like domain
N565_RS04990	SM00271	DnaJ molecular chaperone homology domain
N565_RS05005	SM01245	N565_RS05005
N565_RS05015	SM01234	N565_RS05015
N565_RS05105	SM00318	Staphylococcal nuclease homologues
N565_RS05120	SM00062	Bacterial periplasmic substrate-binding proteins
N565_RS05170	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS05185	SM01004	Delta-aminolevulinic acid dehydratase
N565_RS05235	SM00382	ATPases associated with a variety of cellular activities
N565_RS05240	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS05285	SM00382	ATPases associated with a variety of cellular activities
N565_RS05290	SM00382	ATPases associated with a variety of cellular activities
N565_RS05330	SM00859	Semialdehyde dehydrogenase, NAD binding domain
N565_RS05335	SM00382	ATPases associated with a variety of cellular activities
N565_RS05335	SM00448	cheY-homologous receiver domain
N565_RS05350	SM00434	DNA Topoisomerase IV
N565_RS05365	SM00838	Elongation factor G C-terminus
N565_RS05385	SM00271	DnaJ molecular chaperone homology domain
N565_RS05400	SM00878	Biotin carboxylase C-terminal domain
N565_RS05425	SM00342	helix_turn_helix, arabinose operon control protein
N565_RS05435	SM00876	Biotin and Thiamin Synthesis associated domain
N565_RS05475	SM00463	Small MutS-related domain
N565_RS05475	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
N565_RS05475	SM00534	ATPase domain of DNA mismatch repair MUTS family
N565_RS05505	SM00116	Domain in cystathionine beta-synthase and other proteins.
N565_RS05505	SM01240	N565_RS05505
N565_RS05550	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
N565_RS05585	SM00382	ATPases associated with a variety of cellular activities
N565_RS05585	SM00464	Found in ATP-dependent protease La (LON)
N565_RS05635	SM00478	endonuclease III
N565_RS05645	SM00487	DEAD-like helicases superfamily
N565_RS05645	SM00490	helicase superfamily c-terminal domain
N565_RS05645	SM00982	N565_RS05645
N565_RS05645	SM01058	CarD-like/TRCF domain
N565_RS05690	SM01323	N565_RS05690
N565_RS05760	SM00382	ATPases associated with a variety of cellular activities
N565_RS05760	SM01086	C-terminal, D2-small domain, of ClpB protein
N565_RS05770	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
N565_RS05770	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS05800	SM00382	ATPases associated with a variety of cellular activities
N565_RS05810	SM00448	cheY-homologous receiver domain
N565_RS05870	SM00382	ATPases associated with a variety of cellular activities
N565_RS05925	SM00858	N565_RS05925
N565_RS05995	SM00357	Cold shock protein domain
N565_RS05995	SM00382	ATPases associated with a variety of cellular activities
N565_RS05995	SM00959	Rho termination factor, N-terminal domain
N565_RS06000	SM00382	ATPases associated with a variety of cellular activities
N565_RS06080	SM00836	DALR anticodon binding domain
N565_RS06080	SM01016	Arginyl tRNA synthetase N terminal dom
N565_RS06090	SM00072	Guanylate kinase homologues.
N565_RS06105	SM00382	ATPases associated with a variety of cellular activities
N565_RS06145	SM01228	N565_RS06145
N565_RS06155	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS06190	SM00845	GatB domain
N565_RS06230	SM00382	ATPases associated with a variety of cellular activities
N565_RS06235	SM00382	ATPases associated with a variety of cellular activities
N565_RS06235	SM00962	SRP54-type protein, GTPase domain
N565_RS06250	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
N565_RS06305	SM00883	Chaperonin 10 Kd subunit
N565_RS06315	SM00387	Histidine kinase-like ATPases
N565_RS06315	SM00388	His Kinase A (phosphoacceptor) domain
N565_RS06320	SM00448	cheY-homologous receiver domain
N565_RS06320	SM00862	Transcriptional regulatory protein, C terminal
N565_RS06340	SM00387	Histidine kinase-like ATPases
N565_RS06340	SM00388	His Kinase A (phosphoacceptor) domain
N565_RS06345	SM00448	cheY-homologous receiver domain
N565_RS06345	SM00862	Transcriptional regulatory protein, C terminal
N565_RS06350	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
N565_RS06355	SM00271	DnaJ molecular chaperone homology domain
N565_RS06360	SM00422	helix_turn_helix, mercury resistance
N565_RS06440	SM00465	GIY-YIG type nucleases (URI domain)
N565_RS06460	SM01209	N565_RS06460
N565_RS06460	SM01210	N565_RS06460
N565_RS06475	SM00316	Ribosomal protein S1-like RNA-binding domain
N565_RS06475	SM00322	K homology RNA-binding domain
N565_RS06480	SM00986	Uracil DNA glycosylase superfamily
N565_RS06480	SM00987	UreE urease accessory protein, C-terminal domain 
N565_RS06500	SM00226	Low molecular weight phosphatase family
N565_RS06510	SM00271	DnaJ molecular chaperone homology domain
N565_RS06515	SM00448	cheY-homologous receiver domain
N565_RS06515	SM00862	Transcriptional regulatory protein, C terminal
N565_RS06520	SM00387	Histidine kinase-like ATPases
N565_RS06520	SM00388	His Kinase A (phosphoacceptor) domain
N565_RS06555	SM00646	N565_RS06555
N565_RS06565	SM00363	S4 RNA-binding domain
N565_RS06570	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
N565_RS06570	SM00954	Region found in RelA / SpoT proteins
N565_RS06575	SM01409	N565_RS06575
N565_RS06595	SM00382	ATPases associated with a variety of cellular activities
N565_RS06605	SM00060	Fibronectin type 3 domain
N565_RS06610	SM00363	S4 RNA-binding domain
N565_RS06725	SM00477	DNA/RNA non-specific endonuclease
N565_RS06725	SM00892	DNA/RNA non-specific endonuclease
N565_RS06875	SM00507	HNH nucleases
N565_RS06910	SM00919	Malic enzyme, NAD binding domain
N565_RS06910	SM01274	N565_RS06910
N565_RS06925	SM00878	Biotin carboxylase C-terminal domain
N565_RS07055	SM00858	N565_RS07055
N565_RS07095	SM00858	N565_RS07095
N565_RS07105	SM00116	Domain in cystathionine beta-synthase and other proteins.
N565_RS07225	SM00382	ATPases associated with a variety of cellular activities
N565_RS07265	SM00382	ATPases associated with a variety of cellular activities
N565_RS07295	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS07380	SM01060	N565_RS07380
N565_RS07385	SM00248	ankyrin repeats
N565_RS07425	SM00998	Adenylosuccinate lyase C-terminus
N565_RS07435	SM00899	N565_RS07435
N565_RS07465	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
N565_RS07655	SM00984	UDP binding domain
N565_RS07665	SM00116	Domain in cystathionine beta-synthase and other proteins.
N565_RS07680	SM00382	ATPases associated with a variety of cellular activities
N565_RS07715	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS07720	SM00937	N565_RS07720
N565_RS07795	SM00382	ATPases associated with a variety of cellular activities
N565_RS07805	SM00382	ATPases associated with a variety of cellular activities
N565_RS07820	SM00890	Domain of unknown function
N565_RS07895	SM00448	cheY-homologous receiver domain
N565_RS07895	SM00862	Transcriptional regulatory protein, C terminal
N565_RS07910	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
N565_RS07930	SM00788	Adenylosuccinate synthetase
N565_RS07970	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS08000	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
N565_RS08035	SM00852	Probable molybdopterin binding domain
N565_RS08085	SM00047	Lysozyme subfamily 2
N565_RS08115	SM00382	ATPases associated with a variety of cellular activities
N565_RS08135	SM00796	Allophanate hydrolase subunit 1
N565_RS08140	SM00797	Allophanate hydrolase subunit 2
N565_RS08165	SM00829	Enoylreductase
N565_RS08170	SM00487	DEAD-like helicases superfamily
N565_RS08210	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
N565_RS08215	SM00422	helix_turn_helix, mercury resistance
N565_RS08220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
N565_RS08225	SM00028	Tetratricopeptide repeats
N565_RS08265	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
N565_RS08300	SM00382	ATPases associated with a variety of cellular activities
N565_RS08305	SM00382	ATPases associated with a variety of cellular activities
N565_RS08335	SM00382	ATPases associated with a variety of cellular activities
N565_RS08345	SM00849	Metallo-beta-lactamase superfamily
N565_RS08350	SM00316	Ribosomal protein S1-like RNA-binding domain
N565_RS08370	SM00363	S4 RNA-binding domain
N565_RS08370	SM01390	N565_RS08370
N565_RS08375	SM00662	RNA polymerases D
N565_RS08460	SM00937	N565_RS08460
N565_RS08480	SM00382	ATPases associated with a variety of cellular activities
N565_RS08500	SM00478	endonuclease III
N565_RS08595	SM00358	Double-stranded RNA binding motif
N565_RS08595	SM00535	Ribonuclease III family
N565_RS08610	SM00400	zinc finger
N565_RS08610	SM00493	N565_RS08610
N565_RS08635	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
N565_RS08645	SM00861	Transketolase, pyrimidine binding domain
N565_RS08655	SM00382	ATPases associated with a variety of cellular activities
N565_RS08730	SM00382	ATPases associated with a variety of cellular activities
N565_RS08800	SM01192	N565_RS08800
N565_RS08800	SM01193	N565_RS08800
N565_RS08805	SM00382	ATPases associated with a variety of cellular activities
N565_RS08830	SM00869	Autotransporter beta-domain
N565_RS08860	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS08860	SM00876	Biotin and Thiamin Synthesis associated domain
N565_RS08865	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
N565_RS08865	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
N565_RS08865	SM00493	N565_RS08865
N565_RS08915	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
N565_RS08920	SM01374	N565_RS08920
N565_RS08940	SM00322	K homology RNA-binding domain
N565_RS08955	SM01382	N565_RS08955
N565_RS08955	SM01383	N565_RS08955
N565_RS08975	SM01403	N565_RS08975
N565_RS08980	SM00363	S4 RNA-binding domain
N565_RS08985	SM00849	Metallo-beta-lactamase superfamily
N565_RS08990	SM00650	Ribosomal RNA adenine dimethylases
N565_RS09000	SM00729	Elongator protein 3, MiaB family, Radical SAM
N565_RS09045	SM01329	N565_RS09045
N565_RS09050	SM00917	LeuA allosteric (dimerisation) domain
