locus-tag class description PJ18_RS00005 PF11638 DnaA N-terminal domain PJ18_RS00005 PF00308 Bacterial dnaA protein PJ18_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix PJ18_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PJ18_RS00010 PF02767 DNA polymerase III beta subunit, central domain PJ18_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PJ18_RS00015 PF00204 DNA gyrase B PJ18_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus PJ18_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ18_RS00015 PF01751 Toprim domain PJ18_RS00030 PF13726 Na+-H+ antiporter family PJ18_RS00030 PF03553 Na+/H+ antiporter family PJ18_RS00035 PF04898 Glutamate synthase central domain PJ18_RS00035 PF00310 Glutamine amidotransferases class-II PJ18_RS00035 PF01645 Conserved region in glutamate synthase PJ18_RS00035 PF01493 GXGXG motif PJ18_RS00040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PJ18_RS00040 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJ18_RS00045 PF01351 Ribonuclease HII PJ18_RS00055 PF02915 Rubrerythrin PJ18_RS00060 PF00920 Dehydratase family PJ18_RS00065 PF07274 Protein of unknown function (DUF1440) PJ18_RS00075 PF06508 Queuosine biosynthesis protein QueC PJ18_RS00095 PF03150 Di-haem cytochrome c peroxidase PJ18_RS00095 PF00034 Cytochrome c PJ18_RS00095 PF14376 Haem-binding domain PJ18_RS00100 PF01557 Fumarylacetoacetate (FAA) hydrolase family PJ18_RS00105 PF00849 RNA pseudouridylate synthase PJ18_RS00110 PF00206 Lyase PJ18_RS00110 PF10397 Adenylosuccinate lyase C-terminus PJ18_RS00115 PF03477 ATP cone domain PJ18_RS00115 PF02867 Ribonucleotide reductase, barrel domain PJ18_RS00115 PF00317 Ribonucleotide reductase, all-alpha domain PJ18_RS00120 PF00375 Sodium:dicarboxylate symporter family PJ18_RS00125 PF02511 Thymidylate synthase complementing protein PJ18_RS00130 PF06418 CTP synthase N-terminus PJ18_RS00130 PF00117 Glutamine amidotransferase class-I PJ18_RS00135 PF17768 RecJ OB domain PJ18_RS00135 PF01368 DHH family PJ18_RS00135 PF02272 DHHA1 domain PJ18_RS00140 PF00710 Asparaginase, N-terminal PJ18_RS00140 PF17763 Glutaminase/Asparaginase C-terminal domain PJ18_RS00185 PF17092 Penicillin-binding protein OB-like domain PJ18_RS00185 PF00912 Transglycosylase PJ18_RS00185 PF00905 Penicillin binding protein transpeptidase domain PJ18_RS00200 PF07690 Major Facilitator Superfamily PJ18_RS00220 PF00009 Elongation factor Tu GTP binding domain PJ18_RS00220 PF03144 Elongation factor Tu domain 2 PJ18_RS00220 PF00679 Elongation factor G C-terminus PJ18_RS00235 PF03963 Flagellar hook capping protein - N-terminal region PJ18_RS00240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ18_RS00240 PF07559 Flagellar basal body protein FlaE PJ18_RS00240 PF00460 Flagella basal body rod protein PJ18_RS00260 PF00939 Sodium:sulfate symporter transmembrane region PJ18_RS00275 PF00939 Sodium:sulfate symporter transmembrane region PJ18_RS00310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PJ18_RS00310 PF04509 CheC-like family PJ18_RS00315 PF02154 Flagellar motor switch protein FliM PJ18_RS00315 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PJ18_RS00320 PF04542 Sigma-70 region 2 PJ18_RS00320 PF04539 Sigma-70 region 3 PJ18_RS00320 PF04545 Sigma-70, region 4 PJ18_RS00330 PF10609 NUBPL iron-transfer P-loop NTPase PJ18_RS00335 PF00448 SRP54-type protein, GTPase domain PJ18_RS00340 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PJ18_RS00345 PF01220 Dehydroquinase class II PJ18_RS00350 PF01979 Amidohydrolase family PJ18_RS00355 PF01343 Peptidase family S49 PJ18_RS00375 PF01814 Hemerythrin HHE cation binding domain PJ18_RS00385 PF02589 LUD domain PJ18_RS00385 PF11870 Domain of unknown function (DUF3390) PJ18_RS00385 PF13183 4Fe-4S dicluster domain PJ18_RS00390 PF02754 Cysteine-rich domain PJ18_RS00395 PF02652 L-lactate permease PJ18_RS00400 PF03498 Cytolethal distending toxin A/C domain PJ18_RS00405 PF03372 Endonuclease/Exonuclease/phosphatase family PJ18_RS00410 PF03498 Cytolethal distending toxin A/C domain PJ18_RS00420 PF01654 Cytochrome bd terminal oxidase subunit I PJ18_RS00425 PF02322 Cytochrome bd terminal oxidase subunit II PJ18_RS00435 PF01177 Asp/Glu/Hydantoin racemase PJ18_RS00440 PF03167 Uracil DNA glycosylase superfamily PJ18_RS00445 PF00206 Lyase PJ18_RS00445 PF10415 Fumarase C C-terminus PJ18_RS00450 PF03605 Anaerobic c4-dicarboxylate membrane transporter PJ18_RS00480 PF00829 Ribosomal prokaryotic L21 protein PJ18_RS00485 PF01016 Ribosomal L27 protein PJ18_RS00490 PF01018 GTP1/OBG PJ18_RS00490 PF01926 50S ribosome-binding GTPase PJ18_RS00495 PF00696 Amino acid kinase family PJ18_RS00500 PF02911 Formyl transferase, C-terminal domain PJ18_RS00500 PF00551 Formyl transferase PJ18_RS00505 PF08279 HTH domain PJ18_RS00505 PF02237 Biotin protein ligase C terminal domain PJ18_RS00505 PF03099 Biotin/lipoate A/B protein ligase family PJ18_RS00510 PF13614 AAA domain PJ18_RS00515 PF17762 HTH domain found in ParB protein PJ18_RS00515 PF02195 ParB-like nuclease domain PJ18_RS00525 PF00430 ATP synthase B/B' CF(0) PJ18_RS00530 PF00213 ATP synthase delta (OSCP) subunit PJ18_RS00535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PJ18_RS00535 PF00306 ATP synthase alpha/beta chain, C terminal domain PJ18_RS00535 PF02874 ATP synthase alpha/beta family, beta-barrel domain PJ18_RS00540 PF00231 ATP synthase PJ18_RS00545 PF02874 ATP synthase alpha/beta family, beta-barrel domain PJ18_RS00545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PJ18_RS00550 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PJ18_RS00555 PF01618 MotA/TolQ/ExbB proton channel family PJ18_RS00560 PF02472 Biopolymer transport protein ExbD/TolR PJ18_RS00575 PF00223 Photosystem I psaA/psaB protein PJ18_RS00575 PF00691 OmpA family PJ18_RS00585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PJ18_RS00590 PF00698 Acyl transferase domain PJ18_RS00595 PF01048 Phosphorylase superfamily PJ18_RS00600 PF01171 PP-loop family PJ18_RS00615 PF02130 Uncharacterized protein family UPF0054 PJ18_RS00625 PF01207 Dihydrouridine synthase (Dus) PJ18_RS00635 PF01258 Prokaryotic dksA/traR C4-type zinc finger PJ18_RS00640 PF02590 Predicted SPOUT methyltransferase PJ18_RS00645 PF17848 Acetyl-coA carboxylase zinc finger domain PJ18_RS00645 PF01039 Carboxyl transferase domain PJ18_RS00650 PF00459 Inositol monophosphatase family PJ18_RS00655 PF07244 Surface antigen variable number repeat PJ18_RS00655 PF01103 Surface antigen PJ18_RS00670 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PJ18_RS00680 PF00288 GHMP kinases N terminal domain PJ18_RS00690 PF04760 Translation initiation factor IF-2, N-terminal region PJ18_RS00690 PF11987 Translation-initiation factor 2 PJ18_RS00690 PF00009 Elongation factor Tu GTP binding domain PJ18_RS00695 PF02033 Ribosome-binding factor A PJ18_RS00700 PF17384 RimP C-terminal SH3 domain PJ18_RS00700 PF02576 RimP N-terminal domain PJ18_RS00705 PF07728 AAA domain (dynein-related subfamily) PJ18_RS00705 PF12102 Domain of unknown function (DUF3578) PJ18_RS00715 PF00950 ABC 3 transport family PJ18_RS00720 PF00005 ABC transporter PJ18_RS00730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ18_RS00730 PF02743 Cache domain PJ18_RS00730 PF00672 HAMP domain PJ18_RS00735 PF05958 tRNA (Uracil-5-)-methyltransferase PJ18_RS00735 PF01938 TRAM domain PJ18_RS00745 PF04909 Amidohydrolase PJ18_RS00755 PF01219 Prokaryotic diacylglycerol kinase PJ18_RS00760 PF08019 Phosphoethanolamine transferase EptA/EptB PJ18_RS00760 PF00884 Sulfatase PJ18_RS00765 PF03372 Endonuclease/Exonuclease/phosphatase family PJ18_RS00775 PF04359 Protein of unknown function (DUF493) PJ18_RS00780 PF01967 MoaC family PJ18_RS00790 PF00083 Sugar (and other) transporter PJ18_RS00810 PF00672 HAMP domain PJ18_RS00810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ18_RS00810 PF17202 Single cache domain 3 PJ18_RS00815 PF00453 Ribosomal protein L20 PJ18_RS00820 PF01632 Ribosomal protein L35 PJ18_RS00830 PF01814 Hemerythrin HHE cation binding domain PJ18_RS00835 PF00266 Aminotransferase class-V PJ18_RS00840 PF01106 NifU-like domain PJ18_RS00840 PF04324 BFD-like [2Fe-2S] binding domain PJ18_RS00840 PF01592 NifU-like N terminal domain PJ18_RS00845 PF00924 Mechanosensitive ion channel PJ18_RS00850 PF00484 Carbonic anhydrase PJ18_RS00855 PF01027 Inhibitor of apoptosis-promoting Bax1 PJ18_RS00860 PF03840 Preprotein translocase SecG subunit PJ18_RS00865 PF01765 Ribosome recycling factor PJ18_RS00870 PF00156 Phosphoribosyl transferase domain PJ18_RS00880 PF00268 Ribonucleotide reductase, small chain PJ18_RS00885 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PJ18_RS00885 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PJ18_RS00890 PF00132 Bacterial transferase hexapeptide (six repeats) PJ18_RS00900 PF00202 Aminotransferase class-III PJ18_RS00915 PF02774 Semialdehyde dehydrogenase, dimerisation domain PJ18_RS00915 PF01118 Semialdehyde dehydrogenase, NAD binding domain PJ18_RS00950 PF05198 Translation initiation factor IF-3, N-terminal domain PJ18_RS00950 PF00707 Translation initiation factor IF-3, C-terminal domain PJ18_RS00955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PJ18_RS00955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PJ18_RS00955 PF03129 Anticodon binding domain PJ18_RS00960 PF02673 Bacitracin resistance protein BacA PJ18_RS00965 PF03169 OPT oligopeptide transporter protein PJ18_RS00970 PF03600 Citrate transporter PJ18_RS00995 PF05496 Holliday junction DNA helicase RuvB P-loop domain PJ18_RS00995 PF16193 AAA C-terminal domain PJ18_RS00995 PF12002 MgsA AAA+ ATPase C terminal PJ18_RS00995 PF01661 Macro domain PJ18_RS01000 PF05173 Dihydrodipicolinate reductase, C-terminus PJ18_RS01000 PF01113 Dihydrodipicolinate reductase, N-terminus PJ18_RS01005 PF00156 Phosphoribosyl transferase domain PJ18_RS01010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PJ18_RS01010 PF18269 T3SS EscN ATPase C-terminal domain PJ18_RS01015 PF01227 GTP cyclohydrolase I PJ18_RS01020 PF05697 Bacterial trigger factor protein (TF) PJ18_RS01020 PF05698 Bacterial trigger factor protein (TF) C-terminus PJ18_RS01020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PJ18_RS01025 PF00574 Clp protease PJ18_RS01030 PF01327 Polypeptide deformylase PJ18_RS01035 PF13335 Magnesium chelatase, subunit ChlI C-terminal PJ18_RS01035 PF01078 Magnesium chelatase, subunit ChlI PJ18_RS01045 PF03853 YjeF-related protein N-terminus PJ18_RS01045 PF01256 Carbohydrate kinase PJ18_RS01050 PF00551 Formyl transferase PJ18_RS01055 PF03741 Integral membrane protein TerC family PJ18_RS01060 PF03831 PhnA domain PJ18_RS01060 PF08274 PhnA Zinc-Ribbon PJ18_RS01070 PF00571 CBS domain PJ18_RS01070 PF03471 Transporter associated domain PJ18_RS01070 PF01595 Cyclin M transmembrane N-terminal domain PJ18_RS01075 PF05992 SbmA/BacA-like family PJ18_RS01085 PF02472 Biopolymer transport protein ExbD/TolR PJ18_RS01090 PF01618 MotA/TolQ/ExbB proton channel family PJ18_RS01095 PF07715 TonB-dependent Receptor Plug Domain PJ18_RS01095 PF00593 TonB dependent receptor PJ18_RS01110 PF13416 Bacterial extracellular solute-binding protein PJ18_RS01120 PF08402 TOBE domain PJ18_RS01120 PF00005 ABC transporter PJ18_RS01125 PF03435 Saccharopine dehydrogenase NADP binding domain PJ18_RS01125 PF16653 Saccharopine dehydrogenase C-terminal domain PJ18_RS01135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PJ18_RS01135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PJ18_RS01150 PF02659 Putative manganese efflux pump PJ18_RS01175 PF04055 Radical SAM superfamily PJ18_RS01175 PF06463 Molybdenum Cofactor Synthesis C PJ18_RS01200 PF04452 RNA methyltransferase PJ18_RS01205 PF01197 Ribosomal protein L31 PJ18_RS01210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PJ18_RS01215 PF00588 SpoU rRNA Methylase family PJ18_RS01215 PF08032 RNA 2'-O ribose methyltransferase substrate binding PJ18_RS01230 PF00155 Aminotransferase class I and II PJ18_RS01235 PF03447 Homoserine dehydrogenase, NAD binding domain PJ18_RS01235 PF00742 Homoserine dehydrogenase PJ18_RS01235 PF01842 ACT domain PJ18_RS01245 PF00085 Thioredoxin PJ18_RS01250 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJ18_RS01260 PF17200 Single Cache domain 2 PJ18_RS01260 PF00672 HAMP domain PJ18_RS01260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ18_RS01265 PF02535 ZIP Zinc transporter PJ18_RS01270 PF01568 Molydopterin dinucleotide binding domain PJ18_RS01270 PF18364 Molybdopterin oxidoreductase N-terminal domain PJ18_RS01270 PF00384 Molybdopterin oxidoreductase PJ18_RS01290 PF01145 SPFH domain / Band 7 family PJ18_RS01295 PF01063 Amino-transferase class IV PJ18_RS01300 PF01361 Tautomerase enzyme PJ18_RS01305 PF00578 AhpC/TSA family PJ18_RS01310 PF02677 Epoxyqueuosine reductase QueH PJ18_RS01315 PF07977 FabA-like domain PJ18_RS01320 PF00132 Bacterial transferase hexapeptide (six repeats) PJ18_RS01320 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PJ18_RS01325 PF10431 C-terminal, D2-small domain, of ClpB protein PJ18_RS01325 PF07724 AAA domain (Cdc48 subfamily) PJ18_RS01325 PF06689 ClpX C4-type zinc finger PJ18_RS01340 PF02142 MGS-like domain PJ18_RS01340 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PJ18_RS01340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PJ18_RS01350 PF00923 Transaldolase/Fructose-6-phosphate aldolase PJ18_RS01360 PF01584 CheW-like domain PJ18_RS01365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ18_RS01365 PF01627 Hpt domain PJ18_RS01365 PF00072 Response regulator receiver domain PJ18_RS01365 PF02895 Signal transducing histidine kinase, homodimeric domain PJ18_RS01365 PF01584 CheW-like domain PJ18_RS01370 PF01584 CheW-like domain PJ18_RS01370 PF00072 Response regulator receiver domain PJ18_RS01380 PF01272 Transcription elongation factor, GreA/GreB, C-term PJ18_RS01380 PF03449 Transcription elongation factor, N-terminal PJ18_RS01385 PF02684 Lipid-A-disaccharide synthetase PJ18_RS01400 PF01975 Survival protein SurE PJ18_RS01410 PF13673 Acetyltransferase (GNAT) domain PJ18_RS01415 PF02261 Aspartate decarboxylase PJ18_RS01420 PF02569 Pantoate-beta-alanine ligase PJ18_RS01425 PF02548 Ketopantoate hydroxymethyltransferase PJ18_RS01430 PF00905 Penicillin binding protein transpeptidase domain PJ18_RS01435 PF00005 ABC transporter PJ18_RS01435 PF17850 CysA C-terminal regulatory domain PJ18_RS01435 PF12857 TOBE-like domain PJ18_RS01440 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS01460 PF04301 Protein of unknown function (DUF452) PJ18_RS01465 PF00155 Aminotransferase class I and II PJ18_RS01470 PF00202 Aminotransferase class-III PJ18_RS01480 PF00893 Small Multidrug Resistance protein PJ18_RS01490 PF14693 Ribosomal protein TL5, C-terminal domain PJ18_RS01490 PF01386 Ribosomal L25p family PJ18_RS01495 PF01195 Peptidyl-tRNA hydrolase PJ18_RS01505 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PJ18_RS01505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PJ18_RS01515 PF00800 Prephenate dehydratase PJ18_RS01515 PF01817 Chorismate mutase type II PJ18_RS01515 PF01842 ACT domain PJ18_RS01520 PF00155 Aminotransferase class I and II PJ18_RS01525 PF01514 Secretory protein of YscJ/FliF family PJ18_RS01525 PF08345 Flagellar M-ring protein C-terminal PJ18_RS01530 PF01706 FliG C-terminal domain PJ18_RS01530 PF14842 FliG N-terminal domain PJ18_RS01530 PF14841 FliG middle domain PJ18_RS01540 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PJ18_RS01540 PF02779 Transketolase, pyrimidine binding domain PJ18_RS01540 PF02780 Transketolase, C-terminal domain PJ18_RS01555 PF01209 ubiE/COQ5 methyltransferase family PJ18_RS01560 PF13742 OB-fold nucleic acid binding domain PJ18_RS01560 PF02601 Exonuclease VII, large subunit PJ18_RS01565 PF00266 Aminotransferase class-V PJ18_RS01570 PF01042 Endoribonuclease L-PSP PJ18_RS01575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJ18_RS01575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PJ18_RS01580 PF02504 Fatty acid synthesis protein PJ18_RS01585 PF01783 Ribosomal L32p protein family PJ18_RS01595 PF00334 Nucleoside diphosphate kinase PJ18_RS01600 PF00037 4Fe-4S binding domain PJ18_RS01605 PF10417 C-terminal domain of 1-Cys peroxiredoxin PJ18_RS01605 PF00578 AhpC/TSA family PJ18_RS01610 PF01312 FlhB HrpN YscU SpaS Family PJ18_RS01615 PF00691 OmpA family PJ18_RS01615 PF13677 Membrane MotB of proton-channel complex MotA/MotB PJ18_RS01620 PF01618 MotA/TolQ/ExbB proton channel family PJ18_RS01625 PF00476 DNA polymerase family A PJ18_RS01625 PF01612 3'-5' exonuclease PJ18_RS01625 PF01367 5'-3' exonuclease, C-terminal SAM fold PJ18_RS01625 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PJ18_RS01630 PF00083 Sugar (and other) transporter PJ18_RS01630 PF07690 Major Facilitator Superfamily PJ18_RS01635 PF01156 Inosine-uridine preferring nucleoside hydrolase PJ18_RS01640 PF09335 SNARE associated Golgi protein PJ18_RS01660 PF17760 UvrA interaction domain PJ18_RS01660 PF00005 ABC transporter PJ18_RS01660 PF17755 UvrA DNA-binding domain PJ18_RS01665 PF01925 Sulfite exporter TauE/SafE PJ18_RS01675 PF04715 Anthranilate synthase component I, N terminal region PJ18_RS01675 PF00425 chorismate binding enzyme PJ18_RS01680 PF00591 Glycosyl transferase family, a/b domain PJ18_RS01680 PF02885 Glycosyl transferase family, helical bundle domain PJ18_RS01680 PF00117 Glutamine amidotransferase class-I PJ18_RS01685 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PJ18_RS01690 PF00291 Pyridoxal-phosphate dependent enzyme PJ18_RS01695 PF00290 Tryptophan synthase alpha chain PJ18_RS01705 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PJ18_RS01705 PF04509 CheC-like family PJ18_RS01720 PF00037 4Fe-4S binding domain PJ18_RS01725 PF00072 Response regulator receiver domain PJ18_RS01725 PF00486 Transcriptional regulatory protein, C terminal PJ18_RS01735 PF02660 Glycerol-3-phosphate acyltransferase PJ18_RS01740 PF03150 Di-haem cytochrome c peroxidase PJ18_RS01740 PF00034 Cytochrome c PJ18_RS01745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PJ18_RS01745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PJ18_RS01745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PJ18_RS01750 PF01252 Signal peptidase (SPase) II PJ18_RS01755 PF03653 Uncharacterised protein family (UPF0093) PJ18_RS01760 PF04055 Radical SAM superfamily PJ18_RS01760 PF06969 HemN C-terminal domain PJ18_RS01770 PF02321 Outer membrane efflux protein PJ18_RS01775 PF00873 AcrB/AcrD/AcrF family PJ18_RS01780 PF13533 Biotin-lipoyl like PJ18_RS01795 PF01165 Ribosomal protein S21 PJ18_RS01805 PF03738 Glutathionylspermidine synthase preATP-grasp PJ18_RS01810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJ18_RS01810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PJ18_RS01815 PF04461 Protein of unknown function (DUF520) PJ18_RS01830 PF00004 ATPase family associated with various cellular activities (AAA) PJ18_RS01830 PF17862 AAA+ lid domain PJ18_RS01830 PF06480 FtsH Extracellular PJ18_RS01830 PF01434 Peptidase family M41 PJ18_RS01835 PF01794 Ferric reductase like transmembrane component PJ18_RS01840 PF00174 Oxidoreductase molybdopterin binding domain PJ18_RS01850 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PJ18_RS01855 PF01029 NusB family PJ18_RS01860 PF00885 6,7-dimethyl-8-ribityllumazine synthase PJ18_RS01865 PF00793 DAHP synthetase I family PJ18_RS01875 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PJ18_RS01875 PF01926 50S ribosome-binding GTPase PJ18_RS01880 PF01202 Shikimate kinase PJ18_RS01885 PF00579 tRNA synthetases class I (W and Y) PJ18_RS01890 PF02403 Seryl-tRNA synthetase N-terminal domain PJ18_RS01890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PJ18_RS01905 PF00391 PEP-utilising enzyme, mobile domain PJ18_RS01905 PF02887 Pyruvate kinase, alpha/beta domain PJ18_RS01905 PF00224 Pyruvate kinase, barrel domain PJ18_RS01910 PF06039 Malate:quinone oxidoreductase (Mqo) PJ18_RS01915 PF03309 Type III pantothenate kinase PJ18_RS01925 PF15437 Plasminogen-binding protein pgbA C-terminal PJ18_RS01935 PF02686 Glu-tRNAGln amidotransferase C subunit PJ18_RS01945 PF01475 Ferric uptake regulator family PJ18_RS01950 PF01336 OB-fold nucleic acid binding domain PJ18_RS01950 PF00152 tRNA synthetases class II (D, K and N) PJ18_RS01955 PF00464 Serine hydroxymethyltransferase PJ18_RS01970 PF08501 Shikimate dehydrogenase substrate binding domain PJ18_RS01980 PF01790 Prolipoprotein diacylglyceryl transferase PJ18_RS01985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PJ18_RS01990 PF00890 FAD binding domain PJ18_RS01990 PF02910 Fumarate reductase flavoprotein C-term PJ18_RS01995 PF13085 2Fe-2S iron-sulfur cluster binding domain PJ18_RS01995 PF13183 4Fe-4S dicluster domain PJ18_RS02000 PF12631 MnmE helical domain PJ18_RS02000 PF10396 GTP-binding protein TrmE N-terminus PJ18_RS02000 PF01926 50S ribosome-binding GTPase PJ18_RS02020 PF05199 GMC oxidoreductase PJ18_RS02020 PF00732 GMC oxidoreductase PJ18_RS02045 PF04264 YceI-like domain PJ18_RS02075 PF00005 ABC transporter PJ18_RS02075 PF12848 ABC transporter PJ18_RS02090 PF09186 Domain of unknown function (DUF1949) PJ18_RS02090 PF01205 Uncharacterized protein family UPF0029 PJ18_RS02130 PF08245 Mur ligase middle domain PJ18_RS02135 PF00953 Glycosyl transferase family 4 PJ18_RS02140 PF01676 Metalloenzyme superfamily PJ18_RS02140 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PJ18_RS02160 PF02910 Fumarate reductase flavoprotein C-term PJ18_RS02160 PF00890 FAD binding domain PJ18_RS02165 PF13183 4Fe-4S dicluster domain PJ18_RS02165 PF13085 2Fe-2S iron-sulfur cluster binding domain PJ18_RS02170 PF02754 Cysteine-rich domain PJ18_RS02175 PF03070 TENA/THI-4/PQQC family PJ18_RS02180 PF00550 Phosphopantetheine attachment site PJ18_RS02185 PF02801 Beta-ketoacyl synthase, C-terminal domain PJ18_RS02185 PF00109 Beta-ketoacyl synthase, N-terminal domain PJ18_RS02190 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PJ18_RS02200 PF00293 NUDIX domain PJ18_RS02205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ18_RS02205 PF08447 PAS fold PJ18_RS02205 PF13426 PAS domain PJ18_RS02215 PF00830 Ribosomal L28 family PJ18_RS02220 PF00834 Ribulose-phosphate 3 epimerase family PJ18_RS02225 PF11490 DNA polymerase III polC-type N-terminus II PJ18_RS02225 PF02811 PHP domain PJ18_RS02225 PF07733 Bacterial DNA polymerase III alpha NTPase domain PJ18_RS02225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PJ18_RS02225 PF00929 Exonuclease PJ18_RS02225 PF14480 DNA polymerase III polC-type N-terminus I PJ18_RS02225 PF14579 Helix-hairpin-helix motif PJ18_RS02230 PF01964 Radical SAM ThiC family PJ18_RS02250 PF04028 Domain of unknown function (DUF374) PJ18_RS02255 PF00919 Uncharacterized protein family UPF0004 PJ18_RS02255 PF04055 Radical SAM superfamily PJ18_RS02255 PF01938 TRAM domain PJ18_RS02265 PF08529 NusA N-terminal domain PJ18_RS02265 PF13184 NusA-like KH domain PJ18_RS02275 PF04055 Radical SAM superfamily PJ18_RS02280 PF05193 Peptidase M16 inactive domain PJ18_RS02285 PF00271 Helicase conserved C-terminal domain PJ18_RS02285 PF04851 Type III restriction enzyme, res subunit PJ18_RS02290 PF01152 Bacterial-like globin PJ18_RS02300 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS02305 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS02310 PF00005 ABC transporter PJ18_RS02335 PF00009 Elongation factor Tu GTP binding domain PJ18_RS02335 PF03144 Elongation factor Tu domain 2 PJ18_RS02335 PF03143 Elongation factor Tu C-terminal domain PJ18_RS02340 PF00471 Ribosomal protein L33 PJ18_RS02355 PF02357 Transcription termination factor nusG PJ18_RS02360 PF03946 Ribosomal protein L11, N-terminal domain PJ18_RS02360 PF00298 Ribosomal protein L11, RNA binding domain PJ18_RS02365 PF00687 Ribosomal protein L1p/L10e family PJ18_RS02370 PF00466 Ribosomal protein L10 PJ18_RS02375 PF16320 Ribosomal protein L7/L12 dimerisation domain PJ18_RS02375 PF00542 Ribosomal protein L7/L12 C-terminal domain PJ18_RS02380 PF00562 RNA polymerase Rpb2, domain 6 PJ18_RS02380 PF10385 RNA polymerase beta subunit external 1 domain PJ18_RS02380 PF04565 RNA polymerase Rpb2, domain 3 PJ18_RS02380 PF04560 RNA polymerase Rpb2, domain 7 PJ18_RS02380 PF04563 RNA polymerase beta subunit PJ18_RS02380 PF04561 RNA polymerase Rpb2, domain 2 PJ18_RS02385 PF04983 RNA polymerase Rpb1, domain 3 PJ18_RS02385 PF05000 RNA polymerase Rpb1, domain 4 PJ18_RS02385 PF04998 RNA polymerase Rpb1, domain 5 PJ18_RS02385 PF00623 RNA polymerase Rpb1, domain 2 PJ18_RS02385 PF04997 RNA polymerase Rpb1, domain 1 PJ18_RS02395 PF00701 Dihydrodipicolinate synthetase family PJ18_RS02405 PF08666 SAF domain PJ18_RS02405 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PJ18_RS02410 PF07690 Major Facilitator Superfamily PJ18_RS02420 PF07690 Major Facilitator Superfamily PJ18_RS02435 PF00171 Aldehyde dehydrogenase family PJ18_RS02440 PF00164 Ribosomal protein S12/S23 PJ18_RS02445 PF00177 Ribosomal protein S7p/S5e PJ18_RS02450 PF03764 Elongation factor G, domain IV PJ18_RS02450 PF14492 Elongation Factor G, domain II PJ18_RS02450 PF00009 Elongation factor Tu GTP binding domain PJ18_RS02450 PF03144 Elongation factor Tu domain 2 PJ18_RS02450 PF00679 Elongation factor G C-terminus PJ18_RS02480 PF00218 Indole-3-glycerol phosphate synthase PJ18_RS02505 PF00762 Ferrochelatase PJ18_RS02510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PJ18_RS02510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PJ18_RS02515 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PJ18_RS02520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PJ18_RS02520 PF01411 tRNA synthetases class II (A) PJ18_RS02520 PF02272 DHHA1 domain PJ18_RS02525 PF02545 Maf-like protein PJ18_RS02530 PF00905 Penicillin binding protein transpeptidase domain PJ18_RS02530 PF17092 Penicillin-binding protein OB-like domain PJ18_RS02530 PF00912 Transglycosylase PJ18_RS02535 PF10431 C-terminal, D2-small domain, of ClpB protein PJ18_RS02535 PF02861 Clp amino terminal domain, pathogenicity island component PJ18_RS02535 PF17871 AAA lid domain PJ18_RS02535 PF07724 AAA domain (Cdc48 subfamily) PJ18_RS02535 PF00004 ATPase family associated with various cellular activities (AAA) PJ18_RS02540 PF02583 Metal-sensitive transcriptional repressor PJ18_RS02545 PF13180 PDZ domain PJ18_RS02545 PF03572 Peptidase family S41 PJ18_RS02550 PF01259 SAICAR synthetase PJ18_RS02555 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase PJ18_RS02570 PF01553 Acyltransferase PJ18_RS02575 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PJ18_RS02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ18_RS02580 PF00183 Hsp90 protein PJ18_RS02585 PF00581 Rhodanese-like domain PJ18_RS02615 PF02049 Flagellar hook-basal body complex protein FliE PJ18_RS02620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ18_RS02620 PF00460 Flagella basal body rod protein PJ18_RS02625 PF00460 Flagella basal body rod protein PJ18_RS02640 PF03971 Monomeric isocitrate dehydrogenase PJ18_RS02645 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PJ18_RS02645 PF00056 lactate/malate dehydrogenase, NAD binding domain PJ18_RS02650 PF08442 ATP-grasp domain PJ18_RS02650 PF00549 CoA-ligase PJ18_RS02655 PF02629 CoA binding domain PJ18_RS02655 PF00549 CoA-ligase PJ18_RS02665 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PJ18_RS02665 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PJ18_RS02665 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PJ18_RS02670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PJ18_RS02690 PF00348 Polyprenyl synthetase PJ18_RS02695 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PJ18_RS02695 PF01488 Shikimate / quinate 5-dehydrogenase PJ18_RS02695 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PJ18_RS02700 PF04073 Aminoacyl-tRNA editing domain PJ18_RS02700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PJ18_RS02700 PF03129 Anticodon binding domain PJ18_RS02710 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PJ18_RS02710 PF03900 Porphobilinogen deaminase, C-terminal domain PJ18_RS02715 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PJ18_RS02725 PF07196 Flagellin hook IN motif PJ18_RS02725 PF02465 Flagellar hook-associated protein 2 N-terminus PJ18_RS02725 PF07195 Flagellar hook-associated protein 2 C-terminus PJ18_RS02730 PF02561 Flagellar protein FliS PJ18_RS02740 PF09285 Elongation factor P, C-terminal PJ18_RS02740 PF01132 Elongation factor P (EF-P) OB domain PJ18_RS02740 PF08207 Elongation factor P (EF-P) KOW-like domain PJ18_RS02775 PF00171 Aldehyde dehydrogenase family PJ18_RS02780 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJ18_RS02795 PF00772 DnaB-like helicase N terminal domain PJ18_RS02795 PF03796 DnaB-like helicase C terminal domain PJ18_RS02810 PF03981 Ubiquinol-cytochrome C chaperone PJ18_RS02810 PF13099 Domain of unknown function (DUF3944) PJ18_RS02860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PJ18_RS02860 PF00925 GTP cyclohydrolase II PJ18_RS02865 PF09424 Yqey-like protein PJ18_RS02870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PJ18_RS02870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PJ18_RS02870 PF00205 Thiamine pyrophosphate enzyme, central domain PJ18_RS02875 PF10369 Small subunit of acetolactate synthase PJ18_RS02880 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PJ18_RS02880 PF00132 Bacterial transferase hexapeptide (six repeats) PJ18_RS02885 PF02547 Queuosine biosynthesis protein PJ18_RS02890 PF00902 Sec-independent protein translocase protein (TatC) PJ18_RS02895 PF02416 mttA/Hcf106 family PJ18_RS02900 PF04055 Radical SAM superfamily PJ18_RS02900 PF06969 HemN C-terminal domain PJ18_RS02905 PF00293 NUDIX domain PJ18_RS02910 PF13840 ACT domain PJ18_RS02910 PF01842 ACT domain PJ18_RS02910 PF00696 Amino acid kinase family PJ18_RS02925 PF00809 Pterin binding enzyme PJ18_RS02930 PF01653 NAD-dependent DNA ligase adenylation domain PJ18_RS02930 PF03120 NAD-dependent DNA ligase OB-fold domain PJ18_RS02930 PF00533 BRCA1 C Terminus (BRCT) domain PJ18_RS02945 PF06574 FAD synthetase PJ18_RS02945 PF01687 Riboflavin kinase PJ18_RS02950 PF13847 Methyltransferase domain PJ18_RS02965 PF03458 UPF0126 domain PJ18_RS02975 PF00730 HhH-GPD superfamily base excision DNA repair protein PJ18_RS02975 PF00633 Helix-hairpin-helix motif PJ18_RS02985 PF01116 Fructose-bisphosphate aldolase class-II PJ18_RS03005 PF00209 Sodium:neurotransmitter symporter family PJ18_RS03010 PF03473 MOSC domain PJ18_RS03010 PF03475 3-alpha domain PJ18_RS03015 PF00085 Thioredoxin PJ18_RS03015 PF02683 Cytochrome C biogenesis protein transmembrane region PJ18_RS03015 PF11412 Disulphide bond corrector protein DsbC PJ18_RS03025 PF07687 Peptidase dimerisation domain PJ18_RS03025 PF01546 Peptidase family M20/M25/M40 PJ18_RS03030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PJ18_RS03035 PF12704 MacB-like periplasmic core domain PJ18_RS03035 PF02687 FtsX-like permease family PJ18_RS03035 PF00005 ABC transporter PJ18_RS03040 PF02321 Outer membrane efflux protein PJ18_RS03055 PF03062 MBOAT, membrane-bound O-acyltransferase family PJ18_RS03060 PF00210 Ferritin-like domain PJ18_RS03065 PF12849 PBP superfamily domain PJ18_RS03070 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS03075 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS03080 PF00005 ABC transporter PJ18_RS03090 PF01554 MatE PJ18_RS03105 PF17788 HypF Kae1-like domain PJ18_RS03105 PF01300 Telomere recombination PJ18_RS03105 PF00708 Acylphosphatase PJ18_RS03105 PF07503 HypF finger PJ18_RS03110 PF02492 CobW/HypB/UreG, nucleotide-binding domain PJ18_RS03115 PF01455 HupF/HypC family PJ18_RS03120 PF01924 Hydrogenase formation hypA family PJ18_RS03125 PF00586 AIR synthase related protein, N-terminal domain PJ18_RS03125 PF02769 AIR synthase related protein, C-terminal domain PJ18_RS03130 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PJ18_RS03145 PF00773 RNB domain PJ18_RS03150 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PJ18_RS03150 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PJ18_RS03160 PF02481 DNA recombination-mediator protein A PJ18_RS03160 PF17782 DprA winged helix domain PJ18_RS03165 PF03652 Holliday junction resolvase PJ18_RS03170 PF01189 16S rRNA methyltransferase RsmB/F PJ18_RS03170 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF PJ18_RS03170 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF PJ18_RS03175 PF01625 Peptide methionine sulfoxide reductase PJ18_RS03180 PF00719 Inorganic pyrophosphatase PJ18_RS03190 PF00152 tRNA synthetases class II (D, K and N) PJ18_RS03190 PF02938 GAD domain PJ18_RS03190 PF01336 OB-fold nucleic acid binding domain PJ18_RS03195 PF01513 ATP-NAD kinase PJ18_RS03200 PF13476 AAA domain PJ18_RS03205 PF00990 Diguanylate cyclase, GGDEF domain PJ18_RS03205 PF00072 Response regulator receiver domain PJ18_RS03210 PF01026 TatD related DNase PJ18_RS03215 PF01476 LysM domain PJ18_RS03215 PF00877 NlpC/P60 family PJ18_RS03220 PF05036 Sporulation related domain PJ18_RS03220 PF03330 Lytic transglycolase PJ18_RS03240 PF01926 50S ribosome-binding GTPase PJ18_RS03250 PF00905 Penicillin binding protein transpeptidase domain PJ18_RS03250 PF03717 Penicillin-binding Protein dimerisation domain PJ18_RS03255 PF01321 Creatinase/Prolidase N-terminal domain PJ18_RS03255 PF00557 Metallopeptidase family M24 PJ18_RS03260 PF00854 POT family PJ18_RS03265 PF00854 POT family PJ18_RS03270 PF00854 POT family PJ18_RS03285 PF01926 50S ribosome-binding GTPase PJ18_RS03285 PF07650 KH domain PJ18_RS03290 PF10431 C-terminal, D2-small domain, of ClpB protein PJ18_RS03290 PF07724 AAA domain (Cdc48 subfamily) PJ18_RS03295 PF00227 Proteasome subunit PJ18_RS03300 PF01281 Ribosomal protein L9, N-terminal domain PJ18_RS03300 PF03948 Ribosomal protein L9, C-terminal domain PJ18_RS03305 PF00764 Arginosuccinate synthase PJ18_RS03310 PF01479 S4 domain PJ18_RS03315 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PJ18_RS03320 PF12399 Branched-chain amino acid ATP-binding cassette transporter PJ18_RS03320 PF00005 ABC transporter PJ18_RS03325 PF04552 Sigma-54, DNA binding domain PJ18_RS03325 PF04963 Sigma-54 factor, core binding domain PJ18_RS03325 PF00309 Sigma-54 factor, Activator interacting domain (AID) PJ18_RS03330 PF03605 Anaerobic c4-dicarboxylate membrane transporter PJ18_RS03355 PF00512 His Kinase A (phospho-acceptor) domain PJ18_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ18_RS03355 PF13493 Domain of unknown function (DUF4118) PJ18_RS03355 PF02702 Osmosensitive K+ channel His kinase sensor domain PJ18_RS03360 PF00271 Helicase conserved C-terminal domain PJ18_RS03360 PF12344 Ultra-violet resistance protein B PJ18_RS03360 PF02151 UvrB/uvrC motif PJ18_RS03360 PF04851 Type III restriction enzyme, res subunit PJ18_RS03360 PF17757 UvrB interaction domain PJ18_RS03380 PF18074 Primosomal protein N C-terminal domain PJ18_RS03380 PF00271 Helicase conserved C-terminal domain PJ18_RS03380 PF00270 DEAD/DEAH box helicase PJ18_RS03380 PF17764 3′ DNA-binding domain (3′BD) PJ18_RS03380 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PJ18_RS03390 PF04551 GcpE protein PJ18_RS03395 PF02107 Flagellar L-ring protein PJ18_RS03400 PF01515 Phosphate acetyl/butaryl transferase PJ18_RS03405 PF00871 Acetokinase family PJ18_RS03425 PF01795 MraW methylase family PJ18_RS03430 PF13145 PPIC-type PPIASE domain PJ18_RS03435 PF02491 SHS2 domain inserted in FTSA PJ18_RS03440 PF12327 FtsZ family, C-terminal domain PJ18_RS03440 PF00091 Tubulin/FtsZ family, GTPase domain PJ18_RS03445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ18_RS03445 PF00460 Flagella basal body rod protein PJ18_RS03450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ18_RS03450 PF00460 Flagella basal body rod protein PJ18_RS03455 PF03951 Glutamine synthetase, beta-Grasp domain PJ18_RS03455 PF00120 Glutamine synthetase, catalytic domain PJ18_RS03465 PF01136 Peptidase family U32 PJ18_RS03470 PF00731 AIR carboxylase PJ18_RS03480 PF02091 Glycyl-tRNA synthetase alpha subunit PJ18_RS03485 PF01784 NIF3 (NGG1p interacting factor 3) PJ18_RS03495 PF02390 Putative methyltransferase PJ18_RS03495 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PJ18_RS03500 PF00849 RNA pseudouridylate synthase PJ18_RS03505 PF02978 Signal peptide binding domain PJ18_RS03505 PF00448 SRP54-type protein, GTPase domain PJ18_RS03505 PF02881 SRP54-type protein, helical bundle domain PJ18_RS03510 PF00886 Ribosomal protein S16 PJ18_RS03520 PF01782 RimM N-terminal domain PJ18_RS03520 PF05239 PRC-barrel domain PJ18_RS03525 PF01746 tRNA (Guanine-1)-methyltransferase PJ18_RS03530 PF01245 Ribosomal protein L19 PJ18_RS03535 PF00576 HIUase/Transthyretin family PJ18_RS03540 PF01474 Class-II DAHP synthetase family PJ18_RS03545 PF03960 ArsC family PJ18_RS03550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PJ18_RS03550 PF14579 Helix-hairpin-helix motif PJ18_RS03550 PF02811 PHP domain PJ18_RS03550 PF07733 Bacterial DNA polymerase III alpha NTPase domain PJ18_RS03555 PF01168 Alanine racemase, N-terminal domain PJ18_RS03560 PF00669 Bacterial flagellin N-terminal helical region PJ18_RS03570 PF17827 PrmC N-terminal domain PJ18_RS03570 PF05175 Methyltransferase small domain PJ18_RS03575 PF01435 Peptidase family M48 PJ18_RS03585 PF00994 Probable molybdopterin binding domain PJ18_RS03590 PF01544 CorA-like Mg2+ transporter protein PJ18_RS03610 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS03620 PF08402 TOBE domain PJ18_RS03620 PF00005 ABC transporter PJ18_RS03630 PF00497 Bacterial extracellular solute-binding proteins, family 3 PJ18_RS03715 PF01385 Probable transposase PJ18_RS03715 PF07282 Putative transposase DNA-binding domain PJ18_RS03715 PF12323 Helix-turn-helix domain PJ18_RS03720 PF03544 Gram-negative bacterial TonB protein C-terminal PJ18_RS03725 PF07715 TonB-dependent Receptor Plug Domain PJ18_RS03725 PF00593 TonB dependent receptor PJ18_RS03735 PF01025 GrpE PJ18_RS03740 PF00012 Hsp70 protein PJ18_RS03745 PF12706 Beta-lactamase superfamily domain PJ18_RS03755 PF00155 Aminotransferase class I and II PJ18_RS03760 PF06426 Serine acetyltransferase, N-terminal PJ18_RS03760 PF00132 Bacterial transferase hexapeptide (six repeats) PJ18_RS03765 PF17944 Arginine decarboxylase C-terminal helical extension PJ18_RS03765 PF17810 Arginine decarboxylase helical bundle domain PJ18_RS03765 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PJ18_RS03770 PF03129 Anticodon binding domain PJ18_RS03770 PF13393 Histidyl-tRNA synthetase PJ18_RS03775 PF02223 Thymidylate kinase PJ18_RS03780 PF01467 Cytidylyltransferase-like PJ18_RS03785 PF02441 Flavoprotein PJ18_RS03795 PF03180 NLPA lipoprotein PJ18_RS03800 PF03180 NLPA lipoprotein PJ18_RS03805 PF03180 NLPA lipoprotein PJ18_RS03810 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS03815 PF00005 ABC transporter PJ18_RS03815 PF09383 NIL domain PJ18_RS03820 PF00133 tRNA synthetases class I (I, L, M and V) PJ18_RS03820 PF10458 Valyl tRNA synthetase tRNA binding arm PJ18_RS03820 PF08264 Anticodon-binding domain of tRNA PJ18_RS03830 PF00580 UvrD/REP helicase N-terminal domain PJ18_RS03830 PF13361 UvrD-like helicase C-terminal domain PJ18_RS03840 PF08534 Redoxin PJ18_RS03845 PF00384 Molybdopterin oxidoreductase PJ18_RS03845 PF01568 Molydopterin dinucleotide binding domain PJ18_RS03845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJ18_RS03850 PF12800 4Fe-4S binding domain PJ18_RS03850 PF12838 4Fe-4S dicluster domain PJ18_RS03855 PF13187 4Fe-4S dicluster domain PJ18_RS03855 PF12801 4Fe-4S binding domain PJ18_RS03860 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) PJ18_RS03890 PF01743 Poly A polymerase head domain PJ18_RS03890 PF12627 Probable RNA and SrmB- binding site of polymerase A PJ18_RS03890 PF13735 tRNA nucleotidyltransferase domain 2 putative PJ18_RS03895 PF01842 ACT domain PJ18_RS03895 PF00551 Formyl transferase PJ18_RS03900 PF00266 Aminotransferase class-V PJ18_RS03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ18_RS03910 PF00512 His Kinase A (phospho-acceptor) domain PJ18_RS03920 PF02875 Mur ligase family, glutamate ligase domain PJ18_RS03920 PF01225 Mur ligase family, catalytic domain PJ18_RS03920 PF08245 Mur ligase middle domain PJ18_RS03935 PF07478 D-ala D-ala ligase C-terminus PJ18_RS03935 PF01820 D-ala D-ala ligase N-terminus PJ18_RS03940 PF07499 RuvA, C-terminal domain PJ18_RS03940 PF01330 RuvA N terminal domain PJ18_RS03950 PF03023 Lipid II flippase MurJ PJ18_RS03955 PF09190 DALR domain PJ18_RS03955 PF01406 tRNA synthetases class I (C) catalytic domain PJ18_RS03960 PF00664 ABC transporter transmembrane region PJ18_RS03960 PF00005 ABC transporter PJ18_RS03965 PF01180 Dihydroorotate dehydrogenase PJ18_RS03970 PF05193 Peptidase M16 inactive domain PJ18_RS03970 PF00675 Insulinase (Peptidase family M16) PJ18_RS03975 PF00701 Dihydrodipicolinate synthetase family PJ18_RS03990 PF00753 Metallo-beta-lactamase superfamily PJ18_RS03995 PF02540 NAD synthase PJ18_RS04000 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PJ18_RS04005 PF00291 Pyridoxal-phosphate dependent enzyme PJ18_RS04010 PF02348 Cytidylyltransferase PJ18_RS04025 PF00497 Bacterial extracellular solute-binding proteins, family 3 PJ18_RS04040 PF00813 FliP family PJ18_RS04045 PF12804 MobA-like NTP transferase domain PJ18_RS04045 PF00132 Bacterial transferase hexapeptide (six repeats) PJ18_RS04050 PF04127 DNA / pantothenate metabolism flavoprotein PJ18_RS04050 PF02441 Flavoprotein PJ18_RS04060 PF01255 Putative undecaprenyl diphosphate synthase PJ18_RS04075 PF01416 tRNA pseudouridine synthase PJ18_RS04080 PF13291 ACT domain PJ18_RS04080 PF00291 Pyridoxal-phosphate dependent enzyme PJ18_RS04095 PF05958 tRNA (Uracil-5-)-methyltransferase PJ18_RS04100 PF03553 Na+/H+ antiporter family PJ18_RS04105 PF00106 short chain dehydrogenase PJ18_RS04115 PF11791 Aconitate B N-terminal domain PJ18_RS04115 PF06434 Aconitate hydratase 2 N-terminus PJ18_RS04115 PF00330 Aconitase family (aconitate hydratase) PJ18_RS04120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PJ18_RS04120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PJ18_RS04130 PF09334 tRNA synthetases class I (M) PJ18_RS04130 PF00133 tRNA synthetases class I (I, L, M and V) PJ18_RS04130 PF01588 Putative tRNA binding domain PJ18_RS04140 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PJ18_RS04165 PF00749 tRNA synthetases class I (E and Q), catalytic domain PJ18_RS04170 PF00149 Calcineurin-like phosphoesterase PJ18_RS04175 PF02666 Phosphatidylserine decarboxylase PJ18_RS04180 PF01312 FlhB HrpN YscU SpaS Family PJ18_RS04190 PF07690 Major Facilitator Superfamily PJ18_RS04205 PF00202 Aminotransferase class-III PJ18_RS04215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PJ18_RS04215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PJ18_RS04220 PF10502 Signal peptidase, peptidase S26 PJ18_RS04225 PF00994 Probable molybdopterin binding domain PJ18_RS04225 PF03454 MoeA C-terminal region (domain IV) PJ18_RS04225 PF03453 MoeA N-terminal region (domain I and II) PJ18_RS04230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PJ18_RS04240 PF02885 Glycosyl transferase family, helical bundle domain PJ18_RS04240 PF00591 Glycosyl transferase family, a/b domain PJ18_RS04240 PF00117 Glutamine amidotransferase class-I PJ18_RS04245 PF04715 Anthranilate synthase component I, N terminal region PJ18_RS04245 PF00425 chorismate binding enzyme PJ18_RS04250 PF00589 Phage integrase family PJ18_RS04250 PF18644 Phage integrase SAM-like domain PJ18_RS04260 PF02600 Disulfide bond formation protein DsbB PJ18_RS04295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PJ18_RS04325 PF00771 FHIPEP family PJ18_RS04330 PF02082 Transcriptional regulator PJ18_RS04335 PF00312 Ribosomal protein S15 PJ18_RS04340 PF09397 Ftsk gamma domain PJ18_RS04340 PF01580 FtsK/SpoIIIE family PJ18_RS04340 PF17854 FtsK alpha domain PJ18_RS04345 PF00669 Bacterial flagellin N-terminal helical region PJ18_RS04345 PF00700 Bacterial flagellin C-terminal helical region PJ18_RS04360 PF00005 ABC transporter PJ18_RS04360 PF16326 ABC transporter C-terminal domain PJ18_RS04360 PF12848 ABC transporter PJ18_RS04365 PF00512 His Kinase A (phospho-acceptor) domain PJ18_RS04365 PF00989 PAS fold PJ18_RS04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ18_RS04365 PF16736 Single Cache-like PJ18_RS04370 PF00486 Transcriptional regulatory protein, C terminal PJ18_RS04370 PF00072 Response regulator receiver domain PJ18_RS04375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PJ18_RS04375 PF01842 ACT domain PJ18_RS04375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PJ18_RS04385 PF00575 S1 RNA binding domain PJ18_RS04390 PF02401 LytB protein PJ18_RS04395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PJ18_RS04400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PJ18_RS04400 PF01588 Putative tRNA binding domain PJ18_RS04400 PF03147 Ferredoxin-fold anticodon binding domain PJ18_RS04400 PF03484 tRNA synthetase B5 domain PJ18_RS04400 PF03483 B3/4 domain PJ18_RS04405 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PJ18_RS04405 PF01409 tRNA synthetases class II core domain (F) PJ18_RS04410 PF01230 HIT domain PJ18_RS04425 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS04430 PF00005 ABC transporter PJ18_RS04435 PF01235 Sodium:alanine symporter family PJ18_RS04440 PF00588 SpoU rRNA Methylase family PJ18_RS04445 PF00842 Alanine racemase, C-terminal domain PJ18_RS04445 PF01168 Alanine racemase, N-terminal domain PJ18_RS04470 PF02630 SCO1/SenC PJ18_RS04475 PF00291 Pyridoxal-phosphate dependent enzyme PJ18_RS04480 PF00216 Bacterial DNA-binding protein PJ18_RS04490 PF03061 Thioesterase superfamily PJ18_RS04500 PF02554 Carbon starvation protein CstA PJ18_RS04500 PF13722 5TM C-terminal transporter carbon starvation CstA PJ18_RS04505 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PJ18_RS04505 PF14572 Phosphoribosyl synthetase-associated domain PJ18_RS04510 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS04515 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS04520 PF00497 Bacterial extracellular solute-binding proteins, family 3 PJ18_RS04525 PF00005 ABC transporter PJ18_RS04530 PF01739 CheR methyltransferase, SAM binding domain PJ18_RS04535 PF01339 CheB methylesterase PJ18_RS04535 PF00072 Response regulator receiver domain PJ18_RS04540 PF02502 Ribose/Galactose Isomerase PJ18_RS04550 PF00156 Phosphoribosyl transferase domain PJ18_RS04560 PF00883 Cytosol aminopeptidase family, catalytic domain PJ18_RS04565 PF01926 50S ribosome-binding GTPase PJ18_RS04565 PF06071 Protein of unknown function (DUF933) PJ18_RS04570 PF00206 Lyase PJ18_RS04570 PF14698 Argininosuccinate lyase C-terminal PJ18_RS04575 PF01293 Phosphoenolpyruvate carboxykinase PJ18_RS04580 PF00364 Biotin-requiring enzyme PJ18_RS04580 PF00682 HMGL-like PJ18_RS04580 PF02436 Conserved carboxylase domain PJ18_RS04585 PF00209 Sodium:neurotransmitter symporter family PJ18_RS04590 PF00209 Sodium:neurotransmitter symporter family PJ18_RS04595 PF00137 ATP synthase subunit C PJ18_RS04610 PF00501 AMP-binding enzyme PJ18_RS04610 PF01553 Acyltransferase PJ18_RS04655 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS04665 PF02810 SEC-C motif PJ18_RS04665 PF01043 SecA preprotein cross-linking domain PJ18_RS04665 PF07516 SecA Wing and Scaffold domain PJ18_RS04665 PF07517 SecA DEAD-like domain PJ18_RS04670 PF03548 Outer membrane lipoprotein carrier protein LolA PJ18_RS04680 PF05970 PIF1-like helicase PJ18_RS04680 PF02689 Helicase PJ18_RS04690 PF00795 Carbon-nitrogen hydrolase PJ18_RS04695 PF16916 Dimerisation domain of Zinc Transporter PJ18_RS04695 PF01545 Cation efflux family PJ18_RS04700 PF04371 Porphyromonas-type peptidyl-arginine deiminase PJ18_RS04710 PF02743 Cache domain PJ18_RS04710 PF00672 HAMP domain PJ18_RS04710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ18_RS04720 PF01808 AICARFT/IMPCHase bienzyme PJ18_RS04720 PF02142 MGS-like domain PJ18_RS04725 PF00226 DnaJ domain PJ18_RS04725 PF05099 Tellurite resistance protein TerB PJ18_RS04730 PF00586 AIR synthase related protein, N-terminal domain PJ18_RS04730 PF02769 AIR synthase related protein, C-terminal domain PJ18_RS04730 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PJ18_RS04735 PF10396 GTP-binding protein TrmE N-terminus PJ18_RS04735 PF01926 50S ribosome-binding GTPase PJ18_RS04735 PF12631 MnmE helical domain PJ18_RS04745 PF02096 60Kd inner membrane protein PJ18_RS04745 PF14849 YidC periplasmic domain PJ18_RS04750 PF01809 Putative membrane protein insertion efficiency factor PJ18_RS04755 PF00825 Ribonuclease P PJ18_RS04760 PF00468 Ribosomal protein L34 PJ18_RS04780 PF03061 Thioesterase superfamily PJ18_RS04825 PF08003 Protein of unknown function (DUF1698) PJ18_RS04840 PF00565 Staphylococcal nuclease homologue PJ18_RS04845 PF07687 Peptidase dimerisation domain PJ18_RS04845 PF01546 Peptidase family M20/M25/M40 PJ18_RS04850 PF08946 Osmosensory transporter coiled coil PJ18_RS04850 PF00083 Sugar (and other) transporter PJ18_RS04855 PF00497 Bacterial extracellular solute-binding proteins, family 3 PJ18_RS04860 PF16668 Adhesin from Campylobacter PJ18_RS04865 PF03883 Peroxide stress protein YaaA PJ18_RS04870 PF07687 Peptidase dimerisation domain PJ18_RS04870 PF01546 Peptidase family M20/M25/M40 PJ18_RS04880 PF07690 Major Facilitator Superfamily PJ18_RS04900 PF02754 Cysteine-rich domain PJ18_RS04900 PF13183 4Fe-4S dicluster domain PJ18_RS04900 PF02665 Nitrate reductase gamma subunit PJ18_RS04905 PF04055 Radical SAM superfamily PJ18_RS04905 PF06969 HemN C-terminal domain PJ18_RS04910 PF10788 Protein of unknown function (DUF2603) PJ18_RS04915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PJ18_RS04915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PJ18_RS04920 PF00490 Delta-aminolevulinic acid dehydratase PJ18_RS04925 PF00925 GTP cyclohydrolase II PJ18_RS04930 PF02527 rRNA small subunit methyltransferase G PJ18_RS04940 PF03601 Conserved hypothetical protein 698 PJ18_RS04945 PF03466 LysR substrate binding domain PJ18_RS04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PJ18_RS04950 PF00140 Sigma-70 factor, region 1.2 PJ18_RS04950 PF04545 Sigma-70, region 4 PJ18_RS04950 PF04539 Sigma-70 region 3 PJ18_RS04950 PF04542 Sigma-70 region 2 PJ18_RS04970 PF01434 Peptidase family M41 PJ18_RS04970 PF00004 ATPase family associated with various cellular activities (AAA) PJ18_RS04970 PF17862 AAA+ lid domain PJ18_RS04970 PF06480 FtsH Extracellular PJ18_RS04975 PF00919 Uncharacterized protein family UPF0004 PJ18_RS04975 PF04055 Radical SAM superfamily PJ18_RS04985 PF01761 3-dehydroquinate synthase PJ18_RS04995 PF01702 Queuine tRNA-ribosyltransferase PJ18_RS05015 PF05140 ResB-like family PJ18_RS05015 PF01578 Cytochrome C assembly protein PJ18_RS05020 PF00005 ABC transporter PJ18_RS05025 PF12399 Branched-chain amino acid ATP-binding cassette transporter PJ18_RS05025 PF00005 ABC transporter PJ18_RS05030 PF11862 Domain of unknown function (DUF3382) PJ18_RS05030 PF02653 Branched-chain amino acid transport system / permease component PJ18_RS05035 PF02653 Branched-chain amino acid transport system / permease component PJ18_RS05040 PF13458 Periplasmic binding protein PJ18_RS05045 PF13458 Periplasmic binding protein PJ18_RS05065 PF01118 Semialdehyde dehydrogenase, NAD binding domain PJ18_RS05065 PF02774 Semialdehyde dehydrogenase, dimerisation domain PJ18_RS05070 PF00158 Sigma-54 interaction domain PJ18_RS05070 PF00072 Response regulator receiver domain PJ18_RS05085 PF03989 DNA gyrase C-terminal domain, beta-propeller PJ18_RS05085 PF00521 DNA gyrase/topoisomerase IV, subunit A PJ18_RS05100 PF00009 Elongation factor Tu GTP binding domain PJ18_RS05100 PF03144 Elongation factor Tu domain 2 PJ18_RS05100 PF00679 Elongation factor G C-terminus PJ18_RS05100 PF06421 GTP-binding protein LepA C-terminus PJ18_RS05110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PJ18_RS05110 PF00529 HlyD membrane-fusion protein of T1SS PJ18_RS05115 PF00873 AcrB/AcrD/AcrF family PJ18_RS05125 PF04377 Arginine-tRNA-protein transferase, C terminus PJ18_RS05125 PF04376 Arginine-tRNA-protein transferase, N terminus PJ18_RS05135 PF00289 Biotin carboxylase, N-terminal domain PJ18_RS05135 PF02785 Biotin carboxylase C-terminal domain PJ18_RS05135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PJ18_RS05140 PF01098 Cell cycle protein PJ18_RS05145 PF04101 Glycosyltransferase family 28 C-terminal domain PJ18_RS05145 PF03033 Glycosyltransferase family 28 N-terminal domain PJ18_RS05160 PF12833 Helix-turn-helix domain PJ18_RS05165 PF02581 Thiamine monophosphate synthase PJ18_RS05170 PF06968 Biotin and Thiamin Synthesis associated domain PJ18_RS05170 PF04055 Radical SAM superfamily PJ18_RS05175 PF05690 Thiazole biosynthesis protein ThiG PJ18_RS05180 PF00899 ThiF family PJ18_RS05180 PF00581 Rhodanese-like domain PJ18_RS05190 PF01546 Peptidase family M20/M25/M40 PJ18_RS05190 PF07687 Peptidase dimerisation domain PJ18_RS05200 PF02146 Sir2 family PJ18_RS05210 PF00488 MutS domain V PJ18_RS05210 PF01713 Smr domain PJ18_RS05220 PF01225 Mur ligase family, catalytic domain PJ18_RS05220 PF02875 Mur ligase family, glutamate ligase domain PJ18_RS05220 PF08245 Mur ligase middle domain PJ18_RS05240 PF00478 IMP dehydrogenase / GMP reductase domain PJ18_RS05240 PF00571 CBS domain PJ18_RS05245 PF01425 Amidase PJ18_RS05255 PF00133 tRNA synthetases class I (I, L, M and V) PJ18_RS05255 PF08264 Anticodon-binding domain of tRNA PJ18_RS05260 PF00994 Probable molybdopterin binding domain PJ18_RS05260 PF02464 Competence-damaged protein PJ18_RS05265 PF00583 Acetyltransferase (GNAT) family PJ18_RS05270 PF00881 Nitroreductase family PJ18_RS05275 PF00881 Nitroreductase family PJ18_RS05280 PF01066 CDP-alcohol phosphatidyltransferase PJ18_RS05285 PF17820 PDZ domain PJ18_RS05285 PF02163 Peptidase family M50 PJ18_RS05290 PF04393 Protein of unknown function (DUF535) PJ18_RS05295 PF07992 Pyridine nucleotide-disulphide oxidoreductase PJ18_RS05295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PJ18_RS05305 PF01250 Ribosomal protein S6 PJ18_RS05310 PF00436 Single-strand binding protein family PJ18_RS05315 PF01084 Ribosomal protein S18 PJ18_RS05320 PF00004 ATPase family associated with various cellular activities (AAA) PJ18_RS05320 PF05362 Lon protease (S16) C-terminal proteolytic domain PJ18_RS05320 PF02190 ATP-dependent protease La (LON) substrate-binding domain PJ18_RS05330 PF02623 FliW protein PJ18_RS05335 PF03807 NADP oxidoreductase coenzyme F420-dependent PJ18_RS05335 PF14748 Pyrroline-5-carboxylate reductase dimerisation PJ18_RS05360 PF02581 Thiamine monophosphate synthase PJ18_RS05365 PF08543 Phosphomethylpyrimidine kinase PJ18_RS05380 PF17757 UvrB interaction domain PJ18_RS05380 PF03461 TRCF domain PJ18_RS05380 PF00271 Helicase conserved C-terminal domain PJ18_RS05380 PF00270 DEAD/DEAH box helicase PJ18_RS05380 PF02559 CarD-like/TRCF domain PJ18_RS05390 PF04225 Opacity-associated protein A LysM-like domain PJ18_RS05390 PF01551 Peptidase family M23 PJ18_RS05395 PF02875 Mur ligase family, glutamate ligase domain PJ18_RS05395 PF08245 Mur ligase middle domain PJ18_RS05410 PF09334 tRNA synthetases class I (M) PJ18_RS05410 PF13603 Leucyl-tRNA synthetase, Domain 2 PJ18_RS05410 PF00133 tRNA synthetases class I (I, L, M and V) PJ18_RS05415 PF02355 Protein export membrane protein PJ18_RS05415 PF07549 SecD/SecF GG Motif PJ18_RS05420 PF02355 Protein export membrane protein PJ18_RS05425 PF02699 Preprotein translocase subunit PJ18_RS05435 PF00438 S-adenosylmethionine synthetase, N-terminal domain PJ18_RS05435 PF02772 S-adenosylmethionine synthetase, central domain PJ18_RS05435 PF02773 S-adenosylmethionine synthetase, C-terminal domain PJ18_RS05440 PF00375 Sodium:dicarboxylate symporter family PJ18_RS05445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PJ18_RS05445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PJ18_RS05450 PF01432 Peptidase family M3 PJ18_RS05450 PF08439 Oligopeptidase F PJ18_RS05460 PF13361 UvrD-like helicase C-terminal domain PJ18_RS05460 PF00580 UvrD/REP helicase N-terminal domain PJ18_RS05465 PF01509 TruB family pseudouridylate synthase (N terminal domain) PJ18_RS05470 PF02599 Global regulator protein family PJ18_RS05475 PF00288 GHMP kinases N terminal domain PJ18_RS05480 PF01668 SmpB protein PJ18_RS05490 PF02617 ATP-dependent Clp protease adaptor protein ClpS PJ18_RS05495 PF00004 ATPase family associated with various cellular activities (AAA) PJ18_RS05495 PF07724 AAA domain (Cdc48 subfamily) PJ18_RS05495 PF17871 AAA lid domain PJ18_RS05495 PF02861 Clp amino terminal domain, pathogenicity island component PJ18_RS05495 PF10431 C-terminal, D2-small domain, of ClpB protein PJ18_RS05500 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PJ18_RS05505 PF08447 PAS fold PJ18_RS05505 PF13426 PAS domain PJ18_RS05505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ18_RS05510 PF01914 MarC family integral membrane protein PJ18_RS05515 PF01641 SelR domain PJ18_RS05520 PF04305 Protein of unknown function (DUF455) PJ18_RS05525 PF01066 CDP-alcohol phosphatidyltransferase PJ18_RS05535 PF00004 ATPase family associated with various cellular activities (AAA) PJ18_RS05535 PF17862 AAA+ lid domain PJ18_RS05535 PF01434 Peptidase family M41 PJ18_RS05545 PF00072 Response regulator receiver domain PJ18_RS05555 PF02719 Polysaccharide biosynthesis protein PJ18_RS05560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PJ18_RS05570 PF17836 PglD N-terminal domain PJ18_RS05570 PF00132 Bacterial transferase hexapeptide (six repeats) PJ18_RS05575 PF02397 Bacterial sugar transferase PJ18_RS05580 PF00534 Glycosyl transferases group 1 PJ18_RS05580 PF13477 Glycosyl transferase 4-like PJ18_RS05585 PF02516 Oligosaccharyl transferase STT3 subunit PJ18_RS05585 PF18527 STT3/PglB C-terminal beta-barrel domain PJ18_RS05590 PF13439 Glycosyltransferase Family 4 PJ18_RS05590 PF00534 Glycosyl transferases group 1 PJ18_RS05595 PF00535 Glycosyl transferase family 2 PJ18_RS05600 PF00534 Glycosyl transferases group 1 PJ18_RS05600 PF13439 Glycosyltransferase Family 4 PJ18_RS05605 PF00005 ABC transporter PJ18_RS05605 PF00664 ABC transporter transmembrane region PJ18_RS05610 PF16363 GDP-mannose 4,6 dehydratase PJ18_RS05620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PJ18_RS05625 PF03279 Bacterial lipid A biosynthesis acyltransferase PJ18_RS05630 PF00535 Glycosyl transferase family 2 PJ18_RS05635 PF00535 Glycosyl transferase family 2 PJ18_RS05635 PF01501 Glycosyl transferase family 8 PJ18_RS05645 PF01501 Glycosyl transferase family 8 PJ18_RS05645 PF00535 Glycosyl transferase family 2 PJ18_RS05650 PF06002 Alpha-2,3-sialyltransferase (CST-I) PJ18_RS05655 PF08666 SAF domain PJ18_RS05655 PF03102 NeuB family PJ18_RS05660 PF02350 UDP-N-acetylglucosamine 2-epimerase PJ18_RS05665 PF13472 GDSL-like Lipase/Acylhydrolase family PJ18_RS05665 PF02348 Cytidylyltransferase PJ18_RS05670 PF00132 Bacterial transferase hexapeptide (six repeats) PJ18_RS05675 PF00535 Glycosyl transferase family 2 PJ18_RS05685 PF13580 SIS domain PJ18_RS05690 PF00294 pfkB family carbohydrate kinase PJ18_RS05690 PF01467 Cytidylyltransferase-like PJ18_RS05695 PF01370 NAD dependent epimerase/dehydratase family PJ18_RS05700 PF08645 Polynucleotide kinase 3 phosphatase PJ18_RS05715 PF00403 Heavy-metal-associated domain PJ18_RS05720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PJ18_RS05720 PF07497 Rho termination factor, RNA-binding domain PJ18_RS05720 PF07498 Rho termination factor, N-terminal domain PJ18_RS05725 PF12170 DNA polymerase III tau subunit V interacting with alpha PJ18_RS05725 PF12169 DNA polymerase III subunits gamma and tau domain III PJ18_RS05735 PF00403 Heavy-metal-associated domain PJ18_RS05755 PF06738 Putative threonine/serine exporter PJ18_RS05755 PF12821 Threonine/Serine exporter, ThrE PJ18_RS05765 PF00056 lactate/malate dehydrogenase, NAD binding domain PJ18_RS05765 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PJ18_RS05770 PF09335 SNARE associated Golgi protein PJ18_RS05785 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PJ18_RS05790 PF01709 Transcriptional regulator PJ18_RS05795 PF00893 Small Multidrug Resistance protein PJ18_RS05800 PF00893 Small Multidrug Resistance protein PJ18_RS05805 PF05746 DALR anticodon binding domain PJ18_RS05805 PF00750 tRNA synthetases class I (R) PJ18_RS05805 PF03485 Arginyl tRNA synthetase N terminal domain PJ18_RS05810 PF02416 mttA/Hcf106 family PJ18_RS05815 PF00625 Guanylate kinase PJ18_RS05825 PF01311 Bacterial export proteins, family 1 PJ18_RS05830 PF00005 ABC transporter PJ18_RS05835 PF00889 Elongation factor TS PJ18_RS05840 PF00318 Ribosomal protein S2 PJ18_RS05855 PF00033 Cytochrome b/b6/petB PJ18_RS05855 PF00032 Cytochrome b(C-terminal)/b6/petD PJ18_RS05860 PF00355 Rieske [2Fe-2S] domain PJ18_RS05860 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PJ18_RS05865 PF02040 Arsenical pump membrane protein PJ18_RS05870 PF13932 GidA associated domain PJ18_RS05870 PF01134 Glucose inhibited division protein A PJ18_RS05880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ18_RS05880 PF13426 PAS domain PJ18_RS05880 PF08447 PAS fold PJ18_RS05890 PF00375 Sodium:dicarboxylate symporter family PJ18_RS05900 PF01384 Phosphate transporter family PJ18_RS05905 PF01979 Amidohydrolase family PJ18_RS05910 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PJ18_RS05910 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PJ18_RS05915 PF02934 GatB/GatE catalytic domain PJ18_RS05915 PF02637 GatB domain PJ18_RS05920 PF02664 S-Ribosylhomocysteinase (LuxS) PJ18_RS05925 PF14226 non-haem dioxygenase in morphine synthesis N-terminal PJ18_RS05925 PF03171 2OG-Fe(II) oxygenase superfamily PJ18_RS05930 PF03180 NLPA lipoprotein PJ18_RS05935 PF08267 Cobalamin-independent synthase, N-terminal domain PJ18_RS05935 PF01717 Cobalamin-independent synthase, Catalytic domain PJ18_RS05940 PF02219 Methylenetetrahydrofolate reductase PJ18_RS05950 PF00119 ATP synthase A chain PJ18_RS05955 PF18073 Rubredoxin metal binding domain PJ18_RS05960 PF00448 SRP54-type protein, GTPase domain PJ18_RS05975 PF12072 Domain of unknown function (DUF3552) PJ18_RS05975 PF01966 HD domain PJ18_RS05990 PF03631 Virulence factor BrkB PJ18_RS05995 PF02913 FAD linked oxidases, C-terminal domain PJ18_RS05995 PF01565 FAD binding domain PJ18_RS06005 PF01476 LysM domain PJ18_RS06005 PF01551 Peptidase family M23 PJ18_RS06005 PF08525 Opacity-associated protein A N-terminal motif PJ18_RS06015 PF02578 Multi-copper polyphenol oxidoreductase laccase PJ18_RS06020 PF00677 Lumazine binding domain PJ18_RS06030 PF00166 Chaperonin 10 Kd subunit PJ18_RS06035 PF00118 TCP-1/cpn60 chaperonin family PJ18_RS06040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ18_RS06045 PF00072 Response regulator receiver domain PJ18_RS06045 PF00486 Transcriptional regulatory protein, C terminal PJ18_RS06070 PF00072 Response regulator receiver domain PJ18_RS06070 PF00486 Transcriptional regulatory protein, C terminal PJ18_RS06075 PF00595 PDZ domain PJ18_RS06080 PF00226 DnaJ domain PJ18_RS06080 PF01556 DnaJ C terminal domain PJ18_RS06085 PF13411 MerR HTH family regulatory protein PJ18_RS06090 PF02254 TrkA-N domain PJ18_RS06090 PF00999 Sodium/hydrogen exchanger family PJ18_RS06100 PF13419 Haloacid dehalogenase-like hydrolase PJ18_RS06105 PF02092 Glycyl-tRNA synthetase beta subunit PJ18_RS06110 PF01551 Peptidase family M23 PJ18_RS06120 PF02541 Ppx/GppA phosphatase family PJ18_RS06125 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PJ18_RS06130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PJ18_RS06140 PF07690 Major Facilitator Superfamily PJ18_RS06150 PF01208 Uroporphyrinogen decarboxylase (URO-D) PJ18_RS06155 PF04055 Radical SAM superfamily PJ18_RS06165 PF01541 GIY-YIG catalytic domain PJ18_RS06165 PF02151 UvrB/uvrC motif PJ18_RS06165 PF08459 UvrC Helix-hairpin-helix N-terminal PJ18_RS06175 PF00117 Glutamine amidotransferase class-I PJ18_RS06175 PF02540 NAD synthase PJ18_RS06175 PF00958 GMP synthase C terminal domain PJ18_RS06185 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PJ18_RS06185 PF02843 Phosphoribosylglycinamide synthetase, C domain PJ18_RS06185 PF02844 Phosphoribosylglycinamide synthetase, N domain PJ18_RS06200 PF03725 3' exoribonuclease family, domain 2 PJ18_RS06200 PF00013 KH domain PJ18_RS06200 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PJ18_RS06200 PF01138 3' exoribonuclease family, domain 1 PJ18_RS06200 PF00575 S1 RNA binding domain PJ18_RS06210 PF01361 Tautomerase enzyme PJ18_RS06220 PF07690 Major Facilitator Superfamily PJ18_RS06225 PF01451 Low molecular weight phosphotyrosine protein phosphatase PJ18_RS06230 PF05538 Campylobacter major outer membrane protein PJ18_RS06235 PF00684 DnaJ central domain PJ18_RS06235 PF00226 DnaJ domain PJ18_RS06235 PF01556 DnaJ C terminal domain PJ18_RS06240 PF00486 Transcriptional regulatory protein, C terminal PJ18_RS06240 PF00072 Response regulator receiver domain PJ18_RS06250 PF13662 Toprim domain PJ18_RS06250 PF02132 RecR protein PJ18_RS06255 PF01750 Hydrogenase maturation protease PJ18_RS06260 PF01292 Prokaryotic cytochrome b561 PJ18_RS06265 PF00374 Nickel-dependent hydrogenase PJ18_RS06270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PJ18_RS06270 PF10518 TAT (twin-arginine translocation) pathway signal sequence PJ18_RS06270 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal PJ18_RS06275 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PJ18_RS06275 PF01266 FAD dependent oxidoreductase PJ18_RS06280 PF11741 AMIN domain PJ18_RS06280 PF01520 N-acetylmuramoyl-L-alanine amidase PJ18_RS06290 PF00579 tRNA synthetases class I (W and Y) PJ18_RS06295 PF02824 TGS domain PJ18_RS06295 PF13291 ACT domain PJ18_RS06295 PF04607 Region found in RelA / SpoT proteins PJ18_RS06300 PF01192 RNA polymerase Rpb6 PJ18_RS06305 PF00696 Amino acid kinase family PJ18_RS06320 PF00005 ABC transporter PJ18_RS06320 PF09383 NIL domain PJ18_RS06325 PF02390 Putative methyltransferase PJ18_RS06335 PF01479 S4 domain PJ18_RS06335 PF00849 RNA pseudouridylate synthase PJ18_RS06340 PF01098 Cell cycle protein PJ18_RS06350 PF13356 Arm DNA-binding domain PJ18_RS06350 PF00589 Phage integrase family PJ18_RS06365 PF01555 DNA methylase PJ18_RS06615 PF02386 Cation transport protein PJ18_RS06620 PF02080 TrkA-C domain PJ18_RS06620 PF02254 TrkA-N domain PJ18_RS06625 PF02621 Menaquinone biosynthesis PJ18_RS06635 PF00390 Malic enzyme, N-terminal domain PJ18_RS06635 PF03949 Malic enzyme, NAD binding domain PJ18_RS06635 PF01515 Phosphate acetyl/butaryl transferase PJ18_RS06640 PF00749 tRNA synthetases class I (E and Q), catalytic domain PJ18_RS06650 PF00289 Biotin carboxylase, N-terminal domain PJ18_RS06650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PJ18_RS06650 PF02785 Biotin carboxylase C-terminal domain PJ18_RS06655 PF00364 Biotin-requiring enzyme PJ18_RS06660 PF00692 dUTPase PJ18_RS06665 PF02719 Polysaccharide biosynthesis protein PJ18_RS06670 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PJ18_RS06675 PF16254 Domain of unknown function (DUF4910) PJ18_RS06675 PF16221 winged helix-turn-helix PJ18_RS06675 PF09940 Domain of unknown function (DUF2172) PJ18_RS06710 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PJ18_RS06710 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PJ18_RS06730 PF00550 Phosphopantetheine attachment site PJ18_RS06730 PF00668 Condensation domain PJ18_RS06730 PF13193 AMP-binding enzyme C-terminal domain PJ18_RS06730 PF00501 AMP-binding enzyme PJ18_RS06750 PF02348 Cytidylyltransferase PJ18_RS06760 PF13302 Acetyltransferase (GNAT) domain PJ18_RS06765 PF00977 Histidine biosynthesis protein PJ18_RS06770 PF00117 Glutamine amidotransferase class-I PJ18_RS06780 PF08666 SAF domain PJ18_RS06780 PF03102 NeuB family PJ18_RS06790 PF16363 GDP-mannose 4,6 dehydratase PJ18_RS06795 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PJ18_RS06820 PF08666 SAF domain PJ18_RS06820 PF03102 NeuB family PJ18_RS06825 PF02350 UDP-N-acetylglucosamine 2-epimerase PJ18_RS06830 PF00483 Nucleotidyl transferase PJ18_RS06840 PF02348 Cytidylyltransferase PJ18_RS06870 PF07196 Flagellin hook IN motif PJ18_RS06870 PF00669 Bacterial flagellin N-terminal helical region PJ18_RS06870 PF00700 Bacterial flagellin C-terminal helical region PJ18_RS06875 PF00700 Bacterial flagellin C-terminal helical region PJ18_RS06875 PF07196 Flagellin hook IN motif PJ18_RS06875 PF00669 Bacterial flagellin N-terminal helical region PJ18_RS06895 PF08334 Type II secretion system (T2SS), protein G PJ18_RS06895 PF07963 Prokaryotic N-terminal methylation motif PJ18_RS06900 PF00814 Glycoprotease family PJ18_RS06910 PF13288 DXP reductoisomerase C-terminal domain PJ18_RS06910 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PJ18_RS06910 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PJ18_RS06925 PF05670 NFACT protein RNA binding domain PJ18_RS06930 PF12804 MobA-like NTP transferase domain PJ18_RS06935 PF02253 Phospholipase A1 PJ18_RS06940 PF01032 FecCD transport family PJ18_RS06945 PF01032 FecCD transport family PJ18_RS06950 PF00005 ABC transporter PJ18_RS06955 PF01497 Periplasmic binding protein PJ18_RS06970 PF02335 Cytochrome c552 PJ18_RS06975 PF03264 NapC/NirT cytochrome c family, N-terminal region PJ18_RS06980 PF02503 Polyphosphate kinase middle domain PJ18_RS06980 PF13090 Polyphosphate kinase C-terminal domain 2 PJ18_RS06980 PF13089 Polyphosphate kinase N-terminal domain PJ18_RS06980 PF17941 Polyphosphate kinase C-terminal domain 1 PJ18_RS06990 PF05491 RuvB C-terminal winged helix domain PJ18_RS06990 PF05496 Holliday junction DNA helicase RuvB P-loop domain PJ18_RS06990 PF17864 RuvB AAA lid domain PJ18_RS06995 PF01594 AI-2E family transporter PJ18_RS07000 PF10415 Fumarase C C-terminus PJ18_RS07000 PF00206 Lyase PJ18_RS07005 PF12951 Passenger-associated-transport-repeat PJ18_RS07005 PF03797 Autotransporter beta-domain PJ18_RS07005 PF00082 Subtilase family PJ18_RS07010 PF01380 SIS domain PJ18_RS07020 PF04055 Radical SAM superfamily PJ18_RS07025 PF00860 Permease family PJ18_RS07035 PF04333 MlaA lipoprotein PJ18_RS07050 PF01725 Ham1 family PJ18_RS07055 PF07690 Major Facilitator Superfamily PJ18_RS07065 PF03841 L-seryl-tRNA selenium transferase PJ18_RS07070 PF00009 Elongation factor Tu GTP binding domain PJ18_RS07070 PF09107 Elongation factor SelB, winged helix PJ18_RS07070 PF09106 Elongation factor SelB, winged helix PJ18_RS07070 PF03144 Elongation factor Tu domain 2 PJ18_RS07075 PF13098 Thioredoxin-like domain PJ18_RS07085 PF00258 Flavodoxin PJ18_RS07100 PF06628 Catalase-related immune-responsive PJ18_RS07100 PF00199 Catalase PJ18_RS07110 PF08348 YheO-like PAS domain PJ18_RS07110 PF13309 HTH domain PJ18_RS07115 PF01042 Endoribonuclease L-PSP PJ18_RS07120 PF03606 C4-dicarboxylate anaerobic carrier PJ18_RS07125 PF01053 Cys/Met metabolism PLP-dependent enzyme PJ18_RS07130 PF00206 Lyase PJ18_RS07130 PF10397 Adenylosuccinate lyase C-terminus PJ18_RS07140 PF04023 FeoA domain PJ18_RS07145 PF07664 Ferrous iron transport protein B C terminus PJ18_RS07145 PF02421 Ferrous iron transport protein B PJ18_RS07145 PF07670 Nucleoside recognition PJ18_RS07160 PF00121 Triosephosphate isomerase PJ18_RS07165 PF00162 Phosphoglycerate kinase PJ18_RS07170 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PJ18_RS07170 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PJ18_RS07175 PF01467 Cytidylyltransferase-like PJ18_RS07190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PJ18_RS07190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PJ18_RS07190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PJ18_RS07190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PJ18_RS07195 PF03748 Flagellar basal body-associated protein FliL PJ18_RS07200 PF01648 4'-phosphopantetheinyl transferase superfamily PJ18_RS07210 PF00067 Cytochrome P450 PJ18_RS07220 PF05159 Capsule polysaccharide biosynthesis protein PJ18_RS07225 PF05159 Capsule polysaccharide biosynthesis protein PJ18_RS07235 PF00483 Nucleotidyl transferase PJ18_RS07240 PF00117 Glutamine amidotransferase class-I PJ18_RS07245 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PJ18_RS07245 PF00391 PEP-utilising enzyme, mobile domain PJ18_RS07250 PF01209 ubiE/COQ5 methyltransferase family PJ18_RS07280 PF00485 Phosphoribulokinase / Uridine kinase family PJ18_RS07290 PF00483 Nucleotidyl transferase PJ18_RS07295 PF13580 SIS domain PJ18_RS07300 PF00288 GHMP kinases N terminal domain PJ18_RS07300 PF08544 GHMP kinases C terminal PJ18_RS07305 PF01370 NAD dependent epimerase/dehydratase family PJ18_RS07310 PF16363 GDP-mannose 4,6 dehydratase PJ18_RS07315 PF01370 NAD dependent epimerase/dehydratase family PJ18_RS07320 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PJ18_RS07325 PF00535 Glycosyl transferase family 2 PJ18_RS07325 PF01501 Glycosyl transferase family 8 PJ18_RS07335 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase PJ18_RS07335 PF00535 Glycosyl transferase family 2 PJ18_RS07345 PF01380 SIS domain PJ18_RS07345 PF00571 CBS domain PJ18_RS07350 PF10531 SLBB domain PJ18_RS07350 PF02563 Polysaccharide biosynthesis/export protein PJ18_RS07360 PF00005 ABC transporter PJ18_RS07365 PF01061 ABC-2 type transporter PJ18_RS07390 PF01171 PP-loop family PJ18_RS07395 PF00919 Uncharacterized protein family UPF0004 PJ18_RS07395 PF04055 Radical SAM superfamily PJ18_RS07400 PF00472 RF-1 domain PJ18_RS07400 PF03462 PCRF domain PJ18_RS07410 PF01142 tRNA pseudouridine synthase D (TruD) PJ18_RS07415 PF00586 AIR synthase related protein, N-terminal domain PJ18_RS07415 PF02769 AIR synthase related protein, C-terminal domain PJ18_RS07435 PF02119 Flagellar P-ring protein PJ18_RS07455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ18_RS07455 PF07196 Flagellin hook IN motif PJ18_RS07465 PF01925 Sulfite exporter TauE/SafE PJ18_RS07470 PF00482 Type II secretion system (T2SS), protein F PJ18_RS07475 PF00437 Type II/IV secretion system protein PJ18_RS07490 PF07655 Secretin N-terminal domain PJ18_RS07490 PF00263 Bacterial type II and III secretion system protein PJ18_RS07500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PJ18_RS07500 PF10371 Domain of unknown function PJ18_RS07500 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PJ18_RS07500 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PJ18_RS07500 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PJ18_RS07505 PF13419 Haloacid dehalogenase-like hydrolase PJ18_RS07510 PF00691 OmpA family PJ18_RS07510 PF05736 OprF membrane domain PJ18_RS07515 PF00380 Ribosomal protein S9/S16 PJ18_RS07520 PF00572 Ribosomal protein L13 PJ18_RS07525 PF13361 UvrD-like helicase C-terminal domain PJ18_RS07525 PF00580 UvrD/REP helicase N-terminal domain PJ18_RS07530 PF12705 PD-(D/E)XK nuclease superfamily PJ18_RS07555 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PJ18_RS07555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PJ18_RS07570 PF00115 Cytochrome C and Quinol oxidase polypeptide I PJ18_RS07575 PF00486 Transcriptional regulatory protein, C terminal PJ18_RS07575 PF00072 Response regulator receiver domain PJ18_RS07580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PJ18_RS07580 PF08448 PAS fold PJ18_RS07580 PF08447 PAS fold PJ18_RS07590 PF00117 Glutamine amidotransferase class-I PJ18_RS07590 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PJ18_RS07610 PF00709 Adenylosuccinate synthetase PJ18_RS07620 PF04143 Sulphur transport PJ18_RS07625 PF01206 Sulfurtransferase TusA PJ18_RS07630 PF00474 Sodium:solute symporter family PJ18_RS07635 PF14850 DNA-binding domain of Proline dehydrogenase PJ18_RS07635 PF00171 Aldehyde dehydrogenase family PJ18_RS07635 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PJ18_RS07635 PF01619 Proline dehydrogenase PJ18_RS07640 PF02769 AIR synthase related protein, C-terminal domain PJ18_RS07640 PF00586 AIR synthase related protein, N-terminal domain PJ18_RS07650 PF13426 PAS domain PJ18_RS07650 PF08447 PAS fold PJ18_RS07650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ18_RS07660 PF02634 FdhD/NarQ family PJ18_RS07670 PF13247 4Fe-4S dicluster domain PJ18_RS07675 PF01568 Molydopterin dinucleotide binding domain PJ18_RS07675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJ18_RS07675 PF00384 Molybdopterin oxidoreductase PJ18_RS07680 PF00037 4Fe-4S binding domain PJ18_RS07680 PF01568 Molydopterin dinucleotide binding domain PJ18_RS07680 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PJ18_RS07680 PF00384 Molybdopterin oxidoreductase PJ18_RS07680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJ18_RS07695 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PJ18_RS07700 PF07731 Multicopper oxidase PJ18_RS07700 PF07732 Multicopper oxidase PJ18_RS07710 PF02391 MoaE protein PJ18_RS07715 PF03453 MoeA N-terminal region (domain I and II) PJ18_RS07715 PF03454 MoeA C-terminal region (domain IV) PJ18_RS07715 PF00994 Probable molybdopterin binding domain PJ18_RS07720 PF09827 CRISPR associated protein Cas2 PJ18_RS07725 PF01867 CRISPR associated protein Cas1 PJ18_RS07730 PF18541 RuvC endonuclease subdomain 3 PJ18_RS07730 PF13395 HNH endonuclease PJ18_RS07745 PF03606 C4-dicarboxylate anaerobic carrier PJ18_RS07750 PF00586 AIR synthase related protein, N-terminal domain PJ18_RS07750 PF02769 AIR synthase related protein, C-terminal domain PJ18_RS07755 PF01121 Dephospho-CoA kinase PJ18_RS07760 PF01678 Diaminopimelate epimerase PJ18_RS07765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PJ18_RS07775 PF00210 Ferritin-like domain PJ18_RS07780 PF00342 Phosphoglucose isomerase PJ18_RS07785 PF00483 Nucleotidyl transferase PJ18_RS07790 PF13193 AMP-binding enzyme C-terminal domain PJ18_RS07790 PF00501 AMP-binding enzyme PJ18_RS07790 PF16177 Acetyl-coenzyme A synthetase N-terminus PJ18_RS07795 PF00005 ABC transporter PJ18_RS07800 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS07805 PF12849 PBP superfamily domain PJ18_RS07810 PF03746 LamB/YcsF family PJ18_RS07815 PF02682 Carboxyltransferase domain, subdomain C and D PJ18_RS07820 PF02626 Carboxyltransferase domain, subdomain A and B PJ18_RS07830 PF02525 Flavodoxin-like fold PJ18_RS07835 PF01638 HxlR-like helix-turn-helix PJ18_RS07845 PF00107 Zinc-binding dehydrogenase PJ18_RS07845 PF08240 Alcohol dehydrogenase GroES-like domain PJ18_RS07850 PF11867 Domain of unknown function (DUF3387) PJ18_RS07850 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PJ18_RS07850 PF18766 SWI2/SNF2 ATPase PJ18_RS07870 PF02384 N-6 DNA Methylase PJ18_RS07875 PF13460 NAD(P)H-binding PJ18_RS07880 PF01638 HxlR-like helix-turn-helix PJ18_RS07895 PF01022 Bacterial regulatory protein, arsR family PJ18_RS07905 PF17200 Single Cache domain 2 PJ18_RS07905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PJ18_RS07905 PF00672 HAMP domain PJ18_RS07915 PF00361 Proton-conducting membrane transporter PJ18_RS07920 PF00361 Proton-conducting membrane transporter PJ18_RS07925 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PJ18_RS07925 PF00361 Proton-conducting membrane transporter PJ18_RS07930 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PJ18_RS07935 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PJ18_RS07940 PF12838 4Fe-4S dicluster domain PJ18_RS07945 PF00146 NADH dehydrogenase PJ18_RS07950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PJ18_RS07950 PF00384 Molybdopterin oxidoreductase PJ18_RS07950 PF01568 Molydopterin dinucleotide binding domain PJ18_RS07950 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PJ18_RS07950 PF12838 4Fe-4S dicluster domain PJ18_RS07965 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PJ18_RS07970 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PJ18_RS07975 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PJ18_RS07980 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PJ18_RS07985 PF00005 ABC transporter PJ18_RS07990 PF00005 ABC transporter PJ18_RS07990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PJ18_RS07995 PF12911 N-terminal TM domain of oligopeptide transport permease C PJ18_RS07995 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS08000 PF00528 Binding-protein-dependent transport system inner membrane component PJ18_RS08005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PJ18_RS08010 PF02913 FAD linked oxidases, C-terminal domain PJ18_RS08010 PF01565 FAD binding domain PJ18_RS08015 PF00970 Oxidoreductase FAD-binding domain PJ18_RS08015 PF00042 Globin PJ18_RS08015 PF00175 Oxidoreductase NAD-binding domain PJ18_RS08020 PF00005 ABC transporter PJ18_RS08025 PF07690 Major Facilitator Superfamily PJ18_RS08040 PF01176 Translation initiation factor 1A / IF-1 PJ18_RS08045 PF00444 Ribosomal protein L36 PJ18_RS08050 PF00416 Ribosomal protein S13/S18 PJ18_RS08055 PF00411 Ribosomal protein S11 PJ18_RS08060 PF01479 S4 domain PJ18_RS08060 PF00163 Ribosomal protein S4/S9 N-terminal domain PJ18_RS08065 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PJ18_RS08065 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PJ18_RS08065 PF01000 RNA polymerase Rpb3/RpoA insert domain PJ18_RS08070 PF01196 Ribosomal protein L17 PJ18_RS08075 PF08029 HisG, C-terminal domain PJ18_RS08075 PF01634 ATP phosphoribosyltransferase PJ18_RS08080 PF00815 Histidinol dehydrogenase PJ18_RS08085 PF00475 Imidazoleglycerol-phosphate dehydratase PJ18_RS08085 PF08645 Polynucleotide kinase 3 phosphatase PJ18_RS08090 PF00117 Glutamine amidotransferase class-I PJ18_RS08095 PF00977 Histidine biosynthesis protein PJ18_RS08105 PF00977 Histidine biosynthesis protein PJ18_RS08110 PF01502 Phosphoribosyl-AMP cyclohydrolase PJ18_RS08110 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PJ18_RS08115 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PJ18_RS08115 PF14602 Hexapeptide repeat of succinyl-transferase PJ18_RS08120 PF01883 Iron-sulfur cluster assembly protein PJ18_RS08120 PF10609 NUBPL iron-transfer P-loop NTPase PJ18_RS08125 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PJ18_RS08125 PF02542 YgbB family PJ18_RS08130 PF00486 Transcriptional regulatory protein, C terminal PJ18_RS08130 PF00072 Response regulator receiver domain PJ18_RS08135 PF14306 PUA-like domain PJ18_RS08135 PF01747 ATP-sulfurylase PJ18_RS08140 PF04608 Phosphatidylglycerophosphatase A PJ18_RS08145 PF01649 Ribosomal protein S20 PJ18_RS08150 PF03462 PCRF domain PJ18_RS08150 PF00472 RF-1 domain PJ18_RS08155 PF01243 Pyridoxamine 5'-phosphate oxidase PJ18_RS08155 PF10615 Protein of unknown function (DUF2470) PJ18_RS08160 PF00593 TonB dependent receptor PJ18_RS08160 PF07715 TonB-dependent Receptor Plug Domain PJ18_RS08165 PF01032 FecCD transport family PJ18_RS08170 PF00005 ABC transporter PJ18_RS08175 PF01497 Periplasmic binding protein PJ18_RS08190 PF14815 NUDIX domain PJ18_RS08190 PF00730 HhH-GPD superfamily base excision DNA repair protein PJ18_RS08220 PF01872 RibD C-terminal domain PJ18_RS08220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PJ18_RS08230 PF03315 Serine dehydratase beta chain PJ18_RS08230 PF03313 Serine dehydratase alpha chain PJ18_RS08250 PF01618 MotA/TolQ/ExbB proton channel family PJ18_RS08255 PF02472 Biopolymer transport protein ExbD/TolR PJ18_RS08280 PF01264 Chorismate synthase PJ18_RS08285 PF14622 Ribonuclease-III-like PJ18_RS08285 PF00035 Double-stranded RNA binding motif PJ18_RS08290 PF00075 RNase H PJ18_RS08300 PF08275 DNA primase catalytic core, N-terminal domain PJ18_RS08300 PF01807 CHC2 zinc finger PJ18_RS08315 PF08245 Mur ligase middle domain PJ18_RS08315 PF02875 Mur ligase family, glutamate ligase domain PJ18_RS08320 PF02575 YbaB/EbfC DNA-binding family PJ18_RS08330 PF00348 Polyprenyl synthetase PJ18_RS08335 PF02779 Transketolase, pyrimidine binding domain PJ18_RS08335 PF02780 Transketolase, C-terminal domain PJ18_RS08335 PF00456 Transketolase, thiamine diphosphate binding domain PJ18_RS08340 PF02405 Permease MlaE PJ18_RS08345 PF00005 ABC transporter PJ18_RS08355 PF02470 MlaD protein PJ18_RS08355 PF03886 ABC-type transport auxiliary lipoprotein component PJ18_RS08365 PF00557 Metallopeptidase family M24 PJ18_RS08370 PF01177 Asp/Glu/Hydantoin racemase PJ18_RS08375 PF00877 NlpC/P60 family PJ18_RS08380 PF06965 Na+/H+ antiporter 1 PJ18_RS08385 PF06965 Na+/H+ antiporter 1 PJ18_RS08395 PF03239 Iron permease FTR1 family PJ18_RS08400 PF10634 Fe2+ transport protein PJ18_RS08420 PF00005 ABC transporter PJ18_RS08475 PF14743 DNA ligase OB-like domain PJ18_RS08475 PF01068 ATP dependent DNA ligase domain PJ18_RS08490 PF03952 Enolase, N-terminal domain PJ18_RS08490 PF00113 Enolase, C-terminal TIM barrel domain PJ18_RS08495 PF00154 recA bacterial DNA recombination protein PJ18_RS08500 PF02621 Menaquinone biosynthesis PJ18_RS08505 PF01313 Bacterial export proteins, family 3 PJ18_RS08510 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PJ18_RS08535 PF00459 Inositol monophosphatase family PJ18_RS08540 PF00285 Citrate synthase, C-terminal domain PJ18_RS08550 PF06968 Biotin and Thiamin Synthesis associated domain PJ18_RS08550 PF04055 Radical SAM superfamily PJ18_RS08555 PF01396 Topoisomerase DNA binding C4 zinc finger PJ18_RS08555 PF01751 Toprim domain PJ18_RS08555 PF01131 DNA topoisomerase PJ18_RS08565 PF00344 SecY translocase PJ18_RS08570 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PJ18_RS08575 PF03719 Ribosomal protein S5, C-terminal domain PJ18_RS08575 PF00333 Ribosomal protein S5, N-terminal domain PJ18_RS08580 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PJ18_RS08585 PF00347 Ribosomal protein L6 PJ18_RS08590 PF00410 Ribosomal protein S8 PJ18_RS08595 PF00253 Ribosomal protein S14p/S29e PJ18_RS08600 PF00673 ribosomal L5P family C-terminus PJ18_RS08600 PF00281 Ribosomal protein L5 PJ18_RS08605 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PJ18_RS08605 PF00467 KOW motif PJ18_RS08610 PF00238 Ribosomal protein L14p/L23e PJ18_RS08615 PF00366 Ribosomal protein S17 PJ18_RS08620 PF00831 Ribosomal L29 protein PJ18_RS08625 PF00252 Ribosomal protein L16p/L10e PJ18_RS08630 PF07650 KH domain PJ18_RS08630 PF00189 Ribosomal protein S3, C-terminal domain PJ18_RS08635 PF00237 Ribosomal protein L22p/L17e PJ18_RS08640 PF00203 Ribosomal protein S19 PJ18_RS08645 PF03947 Ribosomal Proteins L2, C-terminal domain PJ18_RS08645 PF00181 Ribosomal Proteins L2, RNA binding domain PJ18_RS08650 PF00276 Ribosomal protein L23 PJ18_RS08655 PF00573 Ribosomal protein L4/L1 family PJ18_RS08660 PF00297 Ribosomal protein L3 PJ18_RS08665 PF00338 Ribosomal protein S10p/S20e PJ18_RS08670 PF00849 RNA pseudouridylate synthase PJ18_RS08670 PF01479 S4 domain PJ18_RS08675 PF00753 Metallo-beta-lactamase superfamily PJ18_RS08675 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PJ18_RS08675 PF17770 Ribonuclease J C-terminal domain PJ18_RS08680 PF00398 Ribosomal RNA adenine dimethylase PJ18_RS08690 PF04055 Radical SAM superfamily PJ18_RS08725 PF00694 Aconitase C-terminal domain PJ18_RS08730 PF00330 Aconitase family (aconitate hydratase) PJ18_RS08735 PF00180 Isocitrate/isopropylmalate dehydrogenase PJ18_RS08740 PF08502 LeuA allosteric (dimerisation) domain PJ18_RS08740 PF00682 HMGL-like PJ18_RS08755 PF14489 QueF-like protein PJ18_RS08765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PJ18_RS08765 PF00460 Flagella basal body rod protein PJ18_RS08765 PF07196 Flagellin hook IN motif PJ18_RS08765 PF07559 Flagellar basal body protein FlaE PJ18_RS08770 PF02075 Crossover junction endodeoxyribonuclease RuvC