locus-tag class description UC78_RS00005 PF11638 DnaA N-terminal domain UC78_RS00005 PF00308 Bacterial dnaA protein UC78_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix UC78_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain UC78_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain UC78_RS00010 PF02767 DNA polymerase III beta subunit, central domain UC78_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus UC78_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UC78_RS00015 PF01751 Toprim domain UC78_RS00015 PF00204 DNA gyrase B UC78_RS00030 PF13726 Na+-H+ antiporter family UC78_RS00030 PF03553 Na+/H+ antiporter family UC78_RS00035 PF01493 GXGXG motif UC78_RS00035 PF04898 Glutamate synthase central domain UC78_RS00035 PF00310 Glutamine amidotransferases class-II UC78_RS00035 PF01645 Conserved region in glutamate synthase UC78_RS00040 PF07992 Pyridine nucleotide-disulphide oxidoreductase UC78_RS00040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UC78_RS00045 PF01351 Ribonuclease HII UC78_RS00055 PF02915 Rubrerythrin UC78_RS00060 PF00920 Dehydratase family UC78_RS00065 PF07274 Protein of unknown function (DUF1440) UC78_RS00075 PF06508 Queuosine biosynthesis protein QueC UC78_RS00090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UC78_RS00090 PF00672 HAMP domain UC78_RS00090 PF12729 Four helix bundle sensory module for signal transduction UC78_RS00095 PF03150 Di-haem cytochrome c peroxidase UC78_RS00095 PF14376 Haem-binding domain UC78_RS00095 PF00034 Cytochrome c UC78_RS00100 PF01557 Fumarylacetoacetate (FAA) hydrolase family UC78_RS00105 PF00849 RNA pseudouridylate synthase UC78_RS00110 PF00206 Lyase UC78_RS00110 PF10397 Adenylosuccinate lyase C-terminus UC78_RS00115 PF03477 ATP cone domain UC78_RS00115 PF00317 Ribonucleotide reductase, all-alpha domain UC78_RS00115 PF02867 Ribonucleotide reductase, barrel domain UC78_RS00120 PF00375 Sodium:dicarboxylate symporter family UC78_RS00125 PF02511 Thymidylate synthase complementing protein UC78_RS00130 PF06418 CTP synthase N-terminus UC78_RS00130 PF00117 Glutamine amidotransferase class-I UC78_RS00135 PF02272 DHHA1 domain UC78_RS00135 PF01368 DHH family UC78_RS00135 PF17768 RecJ OB domain UC78_RS00140 PF00710 Asparaginase, N-terminal UC78_RS00140 PF17763 Glutaminase/Asparaginase C-terminal domain UC78_RS00215 PF07690 Major Facilitator Superfamily UC78_RS00235 PF03144 Elongation factor Tu domain 2 UC78_RS00235 PF00009 Elongation factor Tu GTP binding domain UC78_RS00235 PF00679 Elongation factor G C-terminus UC78_RS00250 PF03963 Flagellar hook capping protein - N-terminal region UC78_RS00255 PF07559 Flagellar basal body protein FlaE UC78_RS00255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UC78_RS00255 PF00460 Flagella basal body rod protein UC78_RS00270 PF00939 Sodium:sulfate symporter transmembrane region UC78_RS00280 PF03641 Possible lysine decarboxylase UC78_RS00305 PF04509 CheC-like family UC78_RS00305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UC78_RS00310 PF02154 Flagellar motor switch protein FliM UC78_RS00310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UC78_RS00315 PF04545 Sigma-70, region 4 UC78_RS00315 PF04539 Sigma-70 region 3 UC78_RS00315 PF04542 Sigma-70 region 2 UC78_RS00325 PF10609 NUBPL iron-transfer P-loop NTPase UC78_RS00330 PF00448 SRP54-type protein, GTPase domain UC78_RS00335 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UC78_RS00340 PF01220 Dehydroquinase class II UC78_RS00345 PF01979 Amidohydrolase family UC78_RS00350 PF01343 Peptidase family S49 UC78_RS00365 PF01814 Hemerythrin HHE cation binding domain UC78_RS00370 PF01814 Hemerythrin HHE cation binding domain UC78_RS00380 PF11870 Domain of unknown function (DUF3390) UC78_RS00380 PF13183 4Fe-4S dicluster domain UC78_RS00380 PF02589 LUD domain UC78_RS00385 PF02754 Cysteine-rich domain UC78_RS00390 PF02652 L-lactate permease UC78_RS00395 PF03498 Cytolethal distending toxin A/C domain UC78_RS00400 PF03372 Endonuclease/Exonuclease/phosphatase family UC78_RS00405 PF03498 Cytolethal distending toxin A/C domain UC78_RS00415 PF01654 Cytochrome bd terminal oxidase subunit I UC78_RS00420 PF02322 Cytochrome bd terminal oxidase subunit II UC78_RS00430 PF01177 Asp/Glu/Hydantoin racemase UC78_RS00435 PF03167 Uracil DNA glycosylase superfamily UC78_RS00440 PF10415 Fumarase C C-terminus UC78_RS00440 PF00206 Lyase UC78_RS00445 PF03605 Anaerobic c4-dicarboxylate membrane transporter UC78_RS00480 PF00829 Ribosomal prokaryotic L21 protein UC78_RS00485 PF01016 Ribosomal L27 protein UC78_RS00490 PF01018 GTP1/OBG UC78_RS00490 PF01926 50S ribosome-binding GTPase UC78_RS00495 PF00696 Amino acid kinase family UC78_RS00500 PF02911 Formyl transferase, C-terminal domain UC78_RS00500 PF00551 Formyl transferase UC78_RS00505 PF02237 Biotin protein ligase C terminal domain UC78_RS00505 PF03099 Biotin/lipoate A/B protein ligase family UC78_RS00505 PF08279 HTH domain UC78_RS00510 PF13614 AAA domain UC78_RS00515 PF02195 ParB-like nuclease domain UC78_RS00515 PF17762 HTH domain found in ParB protein UC78_RS00525 PF00430 ATP synthase B/B' CF(0) UC78_RS00530 PF00213 ATP synthase delta (OSCP) subunit UC78_RS00535 PF02874 ATP synthase alpha/beta family, beta-barrel domain UC78_RS00535 PF00306 ATP synthase alpha/beta chain, C terminal domain UC78_RS00535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UC78_RS00540 PF00231 ATP synthase UC78_RS00545 PF02874 ATP synthase alpha/beta family, beta-barrel domain UC78_RS00545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UC78_RS00550 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UC78_RS00555 PF01618 MotA/TolQ/ExbB proton channel family UC78_RS00560 PF02472 Biopolymer transport protein ExbD/TolR UC78_RS00575 PF00691 OmpA family UC78_RS00575 PF00223 Photosystem I psaA/psaB protein UC78_RS00585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UC78_RS00590 PF00698 Acyl transferase domain UC78_RS00595 PF01048 Phosphorylase superfamily UC78_RS00600 PF01171 PP-loop family UC78_RS00615 PF02130 Uncharacterized protein family UPF0054 UC78_RS00625 PF01207 Dihydrouridine synthase (Dus) UC78_RS00635 PF01258 Prokaryotic dksA/traR C4-type zinc finger UC78_RS00640 PF02590 Predicted SPOUT methyltransferase UC78_RS00645 PF17848 Acetyl-coA carboxylase zinc finger domain UC78_RS00645 PF01039 Carboxyl transferase domain UC78_RS00650 PF00459 Inositol monophosphatase family UC78_RS00655 PF01103 Surface antigen UC78_RS00655 PF07244 Surface antigen variable number repeat UC78_RS00670 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase UC78_RS00680 PF00288 GHMP kinases N terminal domain UC78_RS00690 PF11987 Translation-initiation factor 2 UC78_RS00690 PF04760 Translation initiation factor IF-2, N-terminal region UC78_RS00690 PF00009 Elongation factor Tu GTP binding domain UC78_RS00695 PF02033 Ribosome-binding factor A UC78_RS00700 PF17384 RimP C-terminal SH3 domain UC78_RS00700 PF02576 RimP N-terminal domain UC78_RS00705 PF07728 AAA domain (dynein-related subfamily) UC78_RS00705 PF12102 Domain of unknown function (DUF3578) UC78_RS00715 PF00950 ABC 3 transport family UC78_RS00720 PF00005 ABC transporter UC78_RS00740 PF07992 Pyridine nucleotide-disulphide oxidoreductase UC78_RS00745 PF00085 Thioredoxin UC78_RS00750 PF02021 Uncharacterised protein family UPF0102 UC78_RS00755 PF01842 ACT domain UC78_RS00755 PF00742 Homoserine dehydrogenase UC78_RS00755 PF03447 Homoserine dehydrogenase, NAD binding domain UC78_RS00760 PF00155 Aminotransferase class I and II UC78_RS00775 PF00588 SpoU rRNA Methylase family UC78_RS00775 PF08032 RNA 2'-O ribose methyltransferase substrate binding UC78_RS00780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UC78_RS00785 PF01197 Ribosomal protein L31 UC78_RS00790 PF04452 RNA methyltransferase UC78_RS00815 PF06463 Molybdenum Cofactor Synthesis C UC78_RS00815 PF04055 Radical SAM superfamily UC78_RS00840 PF02659 Putative manganese efflux pump UC78_RS00855 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UC78_RS00855 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UC78_RS00860 PF16653 Saccharopine dehydrogenase C-terminal domain UC78_RS00860 PF03435 Saccharopine dehydrogenase NADP binding domain UC78_RS00865 PF08402 TOBE domain UC78_RS00865 PF00005 ABC transporter UC78_RS00875 PF13416 Bacterial extracellular solute-binding protein UC78_RS00885 PF05992 SbmA/BacA-like family UC78_RS00890 PF01595 Cyclin M transmembrane N-terminal domain UC78_RS00890 PF03471 Transporter associated domain UC78_RS00890 PF00571 CBS domain UC78_RS00900 PF03831 PhnA domain UC78_RS00900 PF08274 PhnA Zinc-Ribbon UC78_RS00905 PF03741 Integral membrane protein TerC family UC78_RS00910 PF00551 Formyl transferase UC78_RS00915 PF03853 YjeF-related protein N-terminus UC78_RS00915 PF01256 Carbohydrate kinase UC78_RS00925 PF01078 Magnesium chelatase, subunit ChlI UC78_RS00925 PF13335 Magnesium chelatase, subunit ChlI C-terminal UC78_RS00930 PF01327 Polypeptide deformylase UC78_RS00935 PF00574 Clp protease UC78_RS00940 PF05697 Bacterial trigger factor protein (TF) UC78_RS00940 PF05698 Bacterial trigger factor protein (TF) C-terminus UC78_RS00940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UC78_RS00945 PF01227 GTP cyclohydrolase I UC78_RS00950 PF18269 T3SS EscN ATPase C-terminal domain UC78_RS00950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UC78_RS00955 PF00156 Phosphoribosyl transferase domain UC78_RS00960 PF01113 Dihydrodipicolinate reductase, N-terminus UC78_RS00960 PF05173 Dihydrodipicolinate reductase, C-terminus UC78_RS00965 PF16193 AAA C-terminal domain UC78_RS00965 PF05496 Holliday junction DNA helicase RuvB P-loop domain UC78_RS00965 PF01661 Macro domain UC78_RS00965 PF12002 MgsA AAA+ ATPase C terminal UC78_RS00990 PF03600 Citrate transporter UC78_RS00995 PF03169 OPT oligopeptide transporter protein UC78_RS01000 PF02673 Bacitracin resistance protein BacA UC78_RS01005 PF03129 Anticodon binding domain UC78_RS01005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UC78_RS01005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UC78_RS01010 PF05198 Translation initiation factor IF-3, N-terminal domain UC78_RS01010 PF00707 Translation initiation factor IF-3, C-terminal domain UC78_RS01045 PF03797 Autotransporter beta-domain UC78_RS01045 PF02395 Immunoglobulin A1 protease UC78_RS01045 PF13018 Extended Signal Peptide of Type V secretion system UC78_RS01060 PF01118 Semialdehyde dehydrogenase, NAD binding domain UC78_RS01060 PF02774 Semialdehyde dehydrogenase, dimerisation domain UC78_RS01070 PF00696 Amino acid kinase family UC78_RS01075 PF00202 Aminotransferase class-III UC78_RS01085 PF00132 Bacterial transferase hexapeptide (six repeats) UC78_RS01090 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family UC78_RS01090 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain UC78_RS01095 PF00268 Ribonucleotide reductase, small chain UC78_RS01105 PF00156 Phosphoribosyl transferase domain UC78_RS01110 PF01765 Ribosome recycling factor UC78_RS01115 PF03840 Preprotein translocase SecG subunit UC78_RS01120 PF01027 Inhibitor of apoptosis-promoting Bax1 UC78_RS01125 PF00484 Carbonic anhydrase UC78_RS01130 PF00924 Mechanosensitive ion channel UC78_RS01135 PF04324 BFD-like [2Fe-2S] binding domain UC78_RS01135 PF01592 NifU-like N terminal domain UC78_RS01135 PF01106 NifU-like domain UC78_RS01140 PF00266 Aminotransferase class-V UC78_RS01145 PF01814 Hemerythrin HHE cation binding domain UC78_RS01155 PF01632 Ribosomal protein L35 UC78_RS01160 PF00453 Ribosomal protein L20 UC78_RS01165 PF00672 HAMP domain UC78_RS01165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UC78_RS01165 PF02743 Cache domain UC78_RS01180 PF00083 Sugar (and other) transporter UC78_RS01190 PF01967 MoaC family UC78_RS01195 PF04359 Protein of unknown function (DUF493) UC78_RS01205 PF03372 Endonuclease/Exonuclease/phosphatase family UC78_RS01210 PF08019 Phosphoethanolamine transferase EptA/EptB UC78_RS01210 PF00884 Sulfatase UC78_RS01215 PF01219 Prokaryotic diacylglycerol kinase UC78_RS01225 PF04909 Amidohydrolase UC78_RS01235 PF01209 ubiE/COQ5 methyltransferase family UC78_RS01240 PF00672 HAMP domain UC78_RS01240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UC78_RS01240 PF02743 Cache domain UC78_RS01245 PF02535 ZIP Zinc transporter UC78_RS01250 PF00384 Molybdopterin oxidoreductase UC78_RS01250 PF18364 Molybdopterin oxidoreductase N-terminal domain UC78_RS01250 PF01568 Molydopterin dinucleotide binding domain UC78_RS01270 PF01145 SPFH domain / Band 7 family UC78_RS01275 PF01063 Amino-transferase class IV UC78_RS01280 PF01361 Tautomerase enzyme UC78_RS01285 PF00578 AhpC/TSA family UC78_RS01290 PF02677 Epoxyqueuosine reductase QueH UC78_RS01295 PF07977 FabA-like domain UC78_RS01300 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 UC78_RS01300 PF00132 Bacterial transferase hexapeptide (six repeats) UC78_RS01305 PF06689 ClpX C4-type zinc finger UC78_RS01305 PF10431 C-terminal, D2-small domain, of ClpB protein UC78_RS01305 PF07724 AAA domain (Cdc48 subfamily) UC78_RS01320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UC78_RS01320 PF02142 MGS-like domain UC78_RS01320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UC78_RS01330 PF00923 Transaldolase/Fructose-6-phosphate aldolase UC78_RS01340 PF01584 CheW-like domain UC78_RS01345 PF02895 Signal transducing histidine kinase, homodimeric domain UC78_RS01345 PF00072 Response regulator receiver domain UC78_RS01345 PF01627 Hpt domain UC78_RS01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UC78_RS01345 PF01584 CheW-like domain UC78_RS01350 PF01584 CheW-like domain UC78_RS01350 PF00072 Response regulator receiver domain UC78_RS01360 PF01272 Transcription elongation factor, GreA/GreB, C-term UC78_RS01360 PF03449 Transcription elongation factor, N-terminal UC78_RS01365 PF02684 Lipid-A-disaccharide synthetase UC78_RS01380 PF01555 DNA methylase UC78_RS01380 PF18273 Type III R-M EcoP15I C-terminal domain UC78_RS01385 PF04851 Type III restriction enzyme, res subunit UC78_RS01385 PF08774 VRR-NUC domain UC78_RS01400 PF01975 Survival protein SurE UC78_RS01410 PF13673 Acetyltransferase (GNAT) domain UC78_RS01415 PF02261 Aspartate decarboxylase UC78_RS01420 PF02569 Pantoate-beta-alanine ligase UC78_RS01425 PF02548 Ketopantoate hydroxymethyltransferase UC78_RS01430 PF00905 Penicillin binding protein transpeptidase domain UC78_RS01440 PF12857 TOBE-like domain UC78_RS01440 PF17850 CysA C-terminal regulatory domain UC78_RS01440 PF00005 ABC transporter UC78_RS01445 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS01465 PF04301 Protein of unknown function (DUF452) UC78_RS01470 PF00155 Aminotransferase class I and II UC78_RS01475 PF00202 Aminotransferase class-III UC78_RS01485 PF00893 Small Multidrug Resistance protein UC78_RS01495 PF01386 Ribosomal L25p family UC78_RS01495 PF14693 Ribosomal protein TL5, C-terminal domain UC78_RS01500 PF01195 Peptidyl-tRNA hydrolase UC78_RS01510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UC78_RS01510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UC78_RS01520 PF01817 Chorismate mutase type II UC78_RS01520 PF00800 Prephenate dehydratase UC78_RS01520 PF01842 ACT domain UC78_RS01525 PF00155 Aminotransferase class I and II UC78_RS01530 PF01514 Secretory protein of YscJ/FliF family UC78_RS01530 PF08345 Flagellar M-ring protein C-terminal UC78_RS01535 PF14842 FliG N-terminal domain UC78_RS01535 PF14841 FliG middle domain UC78_RS01535 PF01706 FliG C-terminal domain UC78_RS01545 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UC78_RS01545 PF02780 Transketolase, C-terminal domain UC78_RS01545 PF02779 Transketolase, pyrimidine binding domain UC78_RS01560 PF01209 ubiE/COQ5 methyltransferase family UC78_RS01565 PF02601 Exonuclease VII, large subunit UC78_RS01565 PF13742 OB-fold nucleic acid binding domain UC78_RS01570 PF00266 Aminotransferase class-V UC78_RS01575 PF01042 Endoribonuclease L-PSP UC78_RS01580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UC78_RS01580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UC78_RS01585 PF02504 Fatty acid synthesis protein UC78_RS01590 PF01783 Ribosomal L32p protein family UC78_RS01600 PF00334 Nucleoside diphosphate kinase UC78_RS01605 PF00037 4Fe-4S binding domain UC78_RS01610 PF10417 C-terminal domain of 1-Cys peroxiredoxin UC78_RS01610 PF00578 AhpC/TSA family UC78_RS01615 PF01312 FlhB HrpN YscU SpaS Family UC78_RS01620 PF13677 Membrane MotB of proton-channel complex MotA/MotB UC78_RS01620 PF00691 OmpA family UC78_RS01625 PF01618 MotA/TolQ/ExbB proton channel family UC78_RS01630 PF01367 5'-3' exonuclease, C-terminal SAM fold UC78_RS01630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UC78_RS01630 PF01612 3'-5' exonuclease UC78_RS01630 PF00476 DNA polymerase family A UC78_RS01635 PF07690 Major Facilitator Superfamily UC78_RS01635 PF00083 Sugar (and other) transporter UC78_RS01640 PF01156 Inosine-uridine preferring nucleoside hydrolase UC78_RS01645 PF09335 SNARE associated Golgi protein UC78_RS01650 PF00005 ABC transporter UC78_RS01650 PF17755 UvrA DNA-binding domain UC78_RS01650 PF17760 UvrA interaction domain UC78_RS01655 PF01925 Sulfite exporter TauE/SafE UC78_RS01665 PF04715 Anthranilate synthase component I, N terminal region UC78_RS01665 PF00425 chorismate binding enzyme UC78_RS01670 PF02885 Glycosyl transferase family, helical bundle domain UC78_RS01670 PF00117 Glutamine amidotransferase class-I UC78_RS01670 PF00591 Glycosyl transferase family, a/b domain UC78_RS01675 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase UC78_RS01680 PF00291 Pyridoxal-phosphate dependent enzyme UC78_RS01685 PF00290 Tryptophan synthase alpha chain UC78_RS01695 PF04509 CheC-like family UC78_RS01695 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UC78_RS01710 PF00037 4Fe-4S binding domain UC78_RS01715 PF00072 Response regulator receiver domain UC78_RS01715 PF00486 Transcriptional regulatory protein, C terminal UC78_RS01725 PF02660 Glycerol-3-phosphate acyltransferase UC78_RS01730 PF03150 Di-haem cytochrome c peroxidase UC78_RS01730 PF00034 Cytochrome c UC78_RS01735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UC78_RS01735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UC78_RS01735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UC78_RS01735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UC78_RS01740 PF01252 Signal peptidase (SPase) II UC78_RS01745 PF03653 Uncharacterised protein family (UPF0093) UC78_RS01750 PF06969 HemN C-terminal domain UC78_RS01750 PF04055 Radical SAM superfamily UC78_RS01760 PF02321 Outer membrane efflux protein UC78_RS01765 PF00873 AcrB/AcrD/AcrF family UC78_RS01770 PF00529 HlyD membrane-fusion protein of T1SS UC78_RS01770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UC78_RS01785 PF01165 Ribosomal protein S21 UC78_RS01795 PF03738 Glutathionylspermidine synthase preATP-grasp UC78_RS01800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UC78_RS01800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UC78_RS01805 PF04461 Protein of unknown function (DUF520) UC78_RS01820 PF00004 ATPase family associated with various cellular activities (AAA) UC78_RS01820 PF17862 AAA+ lid domain UC78_RS01820 PF01434 Peptidase family M41 UC78_RS01820 PF06480 FtsH Extracellular UC78_RS01830 PF00174 Oxidoreductase molybdopterin binding domain UC78_RS01835 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UC78_RS01840 PF01029 NusB family UC78_RS01845 PF00885 6,7-dimethyl-8-ribityllumazine synthase UC78_RS01850 PF00793 DAHP synthetase I family UC78_RS01860 PF01926 50S ribosome-binding GTPase UC78_RS01860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UC78_RS01865 PF01202 Shikimate kinase UC78_RS01870 PF00579 tRNA synthetases class I (W and Y) UC78_RS01875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UC78_RS01875 PF02403 Seryl-tRNA synthetase N-terminal domain UC78_RS01890 PF00391 PEP-utilising enzyme, mobile domain UC78_RS01890 PF00224 Pyruvate kinase, barrel domain UC78_RS01890 PF02887 Pyruvate kinase, alpha/beta domain UC78_RS01895 PF06039 Malate:quinone oxidoreductase (Mqo) UC78_RS01900 PF03309 Type III pantothenate kinase UC78_RS01910 PF15437 Plasminogen-binding protein pgbA C-terminal UC78_RS01920 PF02686 Glu-tRNAGln amidotransferase C subunit UC78_RS01930 PF01475 Ferric uptake regulator family UC78_RS01935 PF01336 OB-fold nucleic acid binding domain UC78_RS01935 PF00152 tRNA synthetases class II (D, K and N) UC78_RS01940 PF00464 Serine hydroxymethyltransferase UC78_RS01955 PF08501 Shikimate dehydrogenase substrate binding domain UC78_RS01965 PF01790 Prolipoprotein diacylglyceryl transferase UC78_RS01970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UC78_RS01975 PF00890 FAD binding domain UC78_RS01975 PF02910 Fumarate reductase flavoprotein C-term UC78_RS01980 PF13183 4Fe-4S dicluster domain UC78_RS01980 PF13085 2Fe-2S iron-sulfur cluster binding domain UC78_RS01985 PF01926 50S ribosome-binding GTPase UC78_RS01985 PF12631 MnmE helical domain UC78_RS01985 PF10396 GTP-binding protein TrmE N-terminus UC78_RS02005 PF00732 GMC oxidoreductase UC78_RS02005 PF05199 GMC oxidoreductase UC78_RS02045 PF12848 ABC transporter UC78_RS02045 PF00005 ABC transporter UC78_RS02060 PF09186 Domain of unknown function (DUF1949) UC78_RS02060 PF01205 Uncharacterized protein family UPF0029 UC78_RS02100 PF08245 Mur ligase middle domain UC78_RS02105 PF00953 Glycosyl transferase family 4 UC78_RS02110 PF06415 BPG-independent PGAM N-terminus (iPGM_N) UC78_RS02110 PF01676 Metalloenzyme superfamily UC78_RS02130 PF02910 Fumarate reductase flavoprotein C-term UC78_RS02130 PF00890 FAD binding domain UC78_RS02135 PF13183 4Fe-4S dicluster domain UC78_RS02135 PF13085 2Fe-2S iron-sulfur cluster binding domain UC78_RS02140 PF02754 Cysteine-rich domain UC78_RS02145 PF03070 TENA/THI-4/PQQC family UC78_RS02150 PF00550 Phosphopantetheine attachment site UC78_RS02155 PF00109 Beta-ketoacyl synthase, N-terminal domain UC78_RS02155 PF02801 Beta-ketoacyl synthase, C-terminal domain UC78_RS02160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UC78_RS02165 PF07715 TonB-dependent Receptor Plug Domain UC78_RS02165 PF00593 TonB dependent receptor UC78_RS02170 PF00293 NUDIX domain UC78_RS02175 PF02743 Cache domain UC78_RS02175 PF00672 HAMP domain UC78_RS02175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UC78_RS02185 PF00830 Ribosomal L28 family UC78_RS02190 PF00834 Ribulose-phosphate 3 epimerase family UC78_RS02195 PF14579 Helix-hairpin-helix motif UC78_RS02195 PF07733 Bacterial DNA polymerase III alpha NTPase domain UC78_RS02195 PF14480 DNA polymerase III polC-type N-terminus I UC78_RS02195 PF00929 Exonuclease UC78_RS02195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UC78_RS02195 PF11490 DNA polymerase III polC-type N-terminus II UC78_RS02195 PF02811 PHP domain UC78_RS02200 PF01964 Radical SAM ThiC family UC78_RS02220 PF04028 Domain of unknown function (DUF374) UC78_RS02225 PF04055 Radical SAM superfamily UC78_RS02225 PF01938 TRAM domain UC78_RS02225 PF00919 Uncharacterized protein family UPF0004 UC78_RS02235 PF08529 NusA N-terminal domain UC78_RS02235 PF13184 NusA-like KH domain UC78_RS02245 PF04055 Radical SAM superfamily UC78_RS02250 PF05193 Peptidase M16 inactive domain UC78_RS02255 PF04851 Type III restriction enzyme, res subunit UC78_RS02255 PF00271 Helicase conserved C-terminal domain UC78_RS02260 PF01152 Bacterial-like globin UC78_RS02270 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS02275 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS02280 PF00005 ABC transporter UC78_RS02305 PF03144 Elongation factor Tu domain 2 UC78_RS02305 PF03143 Elongation factor Tu C-terminal domain UC78_RS02305 PF00009 Elongation factor Tu GTP binding domain UC78_RS02310 PF00471 Ribosomal protein L33 UC78_RS02325 PF02357 Transcription termination factor nusG UC78_RS02330 PF03946 Ribosomal protein L11, N-terminal domain UC78_RS02330 PF00298 Ribosomal protein L11, RNA binding domain UC78_RS02335 PF00687 Ribosomal protein L1p/L10e family UC78_RS02340 PF00466 Ribosomal protein L10 UC78_RS02345 PF00542 Ribosomal protein L7/L12 C-terminal domain UC78_RS02345 PF16320 Ribosomal protein L7/L12 dimerisation domain UC78_RS02350 PF04560 RNA polymerase Rpb2, domain 7 UC78_RS02350 PF00562 RNA polymerase Rpb2, domain 6 UC78_RS02350 PF04565 RNA polymerase Rpb2, domain 3 UC78_RS02350 PF04561 RNA polymerase Rpb2, domain 2 UC78_RS02350 PF04563 RNA polymerase beta subunit UC78_RS02350 PF10385 RNA polymerase beta subunit external 1 domain UC78_RS02355 PF04997 RNA polymerase Rpb1, domain 1 UC78_RS02355 PF04998 RNA polymerase Rpb1, domain 5 UC78_RS02355 PF00623 RNA polymerase Rpb1, domain 2 UC78_RS02355 PF05000 RNA polymerase Rpb1, domain 4 UC78_RS02355 PF04983 RNA polymerase Rpb1, domain 3 UC78_RS02365 PF00701 Dihydrodipicolinate synthetase family UC78_RS02375 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus UC78_RS02375 PF08666 SAF domain UC78_RS02380 PF07690 Major Facilitator Superfamily UC78_RS02390 PF07690 Major Facilitator Superfamily UC78_RS02405 PF00171 Aldehyde dehydrogenase family UC78_RS02410 PF00164 Ribosomal protein S12/S23 UC78_RS02415 PF00177 Ribosomal protein S7p/S5e UC78_RS02420 PF03764 Elongation factor G, domain IV UC78_RS02420 PF03144 Elongation factor Tu domain 2 UC78_RS02420 PF00009 Elongation factor Tu GTP binding domain UC78_RS02420 PF14492 Elongation Factor G, domain II UC78_RS02420 PF00679 Elongation factor G C-terminus UC78_RS02450 PF00218 Indole-3-glycerol phosphate synthase UC78_RS02465 PF00909 Ammonium Transporter Family UC78_RS02470 PF00762 Ferrochelatase UC78_RS02475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UC78_RS02475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UC78_RS02480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UC78_RS02485 PF01411 tRNA synthetases class II (A) UC78_RS02485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UC78_RS02485 PF02272 DHHA1 domain UC78_RS02490 PF02545 Maf-like protein UC78_RS02495 PF00905 Penicillin binding protein transpeptidase domain UC78_RS02495 PF17092 Penicillin-binding protein OB-like domain UC78_RS02495 PF00912 Transglycosylase UC78_RS02500 PF00004 ATPase family associated with various cellular activities (AAA) UC78_RS02500 PF10431 C-terminal, D2-small domain, of ClpB protein UC78_RS02500 PF02861 Clp amino terminal domain, pathogenicity island component UC78_RS02500 PF17871 AAA lid domain UC78_RS02500 PF07724 AAA domain (Cdc48 subfamily) UC78_RS02505 PF02583 Metal-sensitive transcriptional repressor UC78_RS02510 PF03572 Peptidase family S41 UC78_RS02510 PF13180 PDZ domain UC78_RS02515 PF01259 SAICAR synthetase UC78_RS02520 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase UC78_RS02535 PF01553 Acyltransferase UC78_RS02540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UC78_RS02545 PF00183 Hsp90 protein UC78_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UC78_RS02550 PF00581 Rhodanese-like domain UC78_RS02570 PF02049 Flagellar hook-basal body complex protein FliE UC78_RS02575 PF00460 Flagella basal body rod protein UC78_RS02575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UC78_RS02580 PF00460 Flagella basal body rod protein UC78_RS02595 PF03971 Monomeric isocitrate dehydrogenase UC78_RS02600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UC78_RS02600 PF00056 lactate/malate dehydrogenase, NAD binding domain UC78_RS02605 PF08442 ATP-grasp domain UC78_RS02605 PF00549 CoA-ligase UC78_RS02610 PF02629 CoA binding domain UC78_RS02610 PF00549 CoA-ligase UC78_RS02620 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg UC78_RS02620 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase UC78_RS02620 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II UC78_RS02625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UC78_RS02645 PF00348 Polyprenyl synthetase UC78_RS02650 PF01488 Shikimate / quinate 5-dehydrogenase UC78_RS02650 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain UC78_RS02650 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain UC78_RS02655 PF04073 Aminoacyl-tRNA editing domain UC78_RS02655 PF03129 Anticodon binding domain UC78_RS02655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UC78_RS02665 PF03900 Porphobilinogen deaminase, C-terminal domain UC78_RS02665 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain UC78_RS02670 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UC78_RS02680 PF07196 Flagellin hook IN motif UC78_RS02680 PF07195 Flagellar hook-associated protein 2 C-terminus UC78_RS02680 PF02465 Flagellar hook-associated protein 2 N-terminus UC78_RS02685 PF02561 Flagellar protein FliS UC78_RS02695 PF08207 Elongation factor P (EF-P) KOW-like domain UC78_RS02695 PF01132 Elongation factor P (EF-P) OB domain UC78_RS02695 PF09285 Elongation factor P, C-terminal UC78_RS02730 PF00171 Aldehyde dehydrogenase family UC78_RS02735 PF07992 Pyridine nucleotide-disulphide oxidoreductase UC78_RS02750 PF03796 DnaB-like helicase C terminal domain UC78_RS02750 PF00772 DnaB-like helicase N terminal domain UC78_RS02795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UC78_RS02795 PF00925 GTP cyclohydrolase II UC78_RS02800 PF09424 Yqey-like protein UC78_RS02805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UC78_RS02805 PF00205 Thiamine pyrophosphate enzyme, central domain UC78_RS02805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UC78_RS02810 PF10369 Small subunit of acetolactate synthase UC78_RS02815 PF00132 Bacterial transferase hexapeptide (six repeats) UC78_RS02815 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD UC78_RS02820 PF02547 Queuosine biosynthesis protein UC78_RS02825 PF00902 Sec-independent protein translocase protein (TatC) UC78_RS02830 PF02416 mttA/Hcf106 family UC78_RS02835 PF04055 Radical SAM superfamily UC78_RS02835 PF06969 HemN C-terminal domain UC78_RS02840 PF00293 NUDIX domain UC78_RS02845 PF00696 Amino acid kinase family UC78_RS02845 PF01842 ACT domain UC78_RS02845 PF13840 ACT domain UC78_RS02860 PF00809 Pterin binding enzyme UC78_RS02865 PF03120 NAD-dependent DNA ligase OB-fold domain UC78_RS02865 PF01653 NAD-dependent DNA ligase adenylation domain UC78_RS02865 PF00533 BRCA1 C Terminus (BRCT) domain UC78_RS02880 PF06574 FAD synthetase UC78_RS02880 PF01687 Riboflavin kinase UC78_RS02885 PF13847 Methyltransferase domain UC78_RS02900 PF03458 UPF0126 domain UC78_RS02910 PF00730 HhH-GPD superfamily base excision DNA repair protein UC78_RS02910 PF00633 Helix-hairpin-helix motif UC78_RS02910 PF10576 Iron-sulfur binding domain of endonuclease III UC78_RS02920 PF01116 Fructose-bisphosphate aldolase class-II UC78_RS02940 PF00209 Sodium:neurotransmitter symporter family UC78_RS02945 PF03473 MOSC domain UC78_RS02945 PF03475 3-alpha domain UC78_RS02950 PF02683 Cytochrome C biogenesis protein transmembrane region UC78_RS02950 PF00085 Thioredoxin UC78_RS02950 PF11412 Disulphide bond corrector protein DsbC UC78_RS02955 PF03976 Polyphosphate kinase 2 (PPK2) UC78_RS02960 PF07687 Peptidase dimerisation domain UC78_RS02960 PF01546 Peptidase family M20/M25/M40 UC78_RS02965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UC78_RS02970 PF00005 ABC transporter UC78_RS02970 PF12704 MacB-like periplasmic core domain UC78_RS02970 PF02687 FtsX-like permease family UC78_RS02975 PF02321 Outer membrane efflux protein UC78_RS02990 PF03062 MBOAT, membrane-bound O-acyltransferase family UC78_RS02995 PF00210 Ferritin-like domain UC78_RS03000 PF12849 PBP superfamily domain UC78_RS03005 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS03010 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS03015 PF00005 ABC transporter UC78_RS03020 PF01554 MatE UC78_RS03035 PF17788 HypF Kae1-like domain UC78_RS03035 PF00708 Acylphosphatase UC78_RS03035 PF01300 Telomere recombination UC78_RS03035 PF07503 HypF finger UC78_RS03040 PF02492 CobW/HypB/UreG, nucleotide-binding domain UC78_RS03045 PF01455 HupF/HypC family UC78_RS03050 PF01924 Hydrogenase formation hypA family UC78_RS03055 PF00586 AIR synthase related protein, N-terminal domain UC78_RS03055 PF02769 AIR synthase related protein, C-terminal domain UC78_RS03060 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA UC78_RS03075 PF00773 RNB domain UC78_RS03080 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain UC78_RS03080 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain UC78_RS03090 PF17782 DprA winged helix domain UC78_RS03090 PF02481 DNA recombination-mediator protein A UC78_RS03095 PF03652 Holliday junction resolvase UC78_RS03100 PF01189 16S rRNA methyltransferase RsmB/F UC78_RS03100 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF UC78_RS03100 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF UC78_RS03105 PF01625 Peptide methionine sulfoxide reductase UC78_RS03110 PF00719 Inorganic pyrophosphatase UC78_RS03120 PF02938 GAD domain UC78_RS03120 PF00152 tRNA synthetases class II (D, K and N) UC78_RS03120 PF01336 OB-fold nucleic acid binding domain UC78_RS03125 PF01513 ATP-NAD kinase UC78_RS03130 PF13476 AAA domain UC78_RS03135 PF00072 Response regulator receiver domain UC78_RS03135 PF00990 Diguanylate cyclase, GGDEF domain UC78_RS03140 PF01026 TatD related DNase UC78_RS03145 PF01476 LysM domain UC78_RS03145 PF00877 NlpC/P60 family UC78_RS03150 PF05036 Sporulation related domain UC78_RS03150 PF03330 Lytic transglycolase UC78_RS03170 PF01926 50S ribosome-binding GTPase UC78_RS03180 PF00905 Penicillin binding protein transpeptidase domain UC78_RS03180 PF03717 Penicillin-binding Protein dimerisation domain UC78_RS03185 PF01321 Creatinase/Prolidase N-terminal domain UC78_RS03185 PF00557 Metallopeptidase family M24 UC78_RS03195 PF00854 POT family UC78_RS03210 PF01926 50S ribosome-binding GTPase UC78_RS03210 PF07650 KH domain UC78_RS03215 PF10431 C-terminal, D2-small domain, of ClpB protein UC78_RS03215 PF07724 AAA domain (Cdc48 subfamily) UC78_RS03220 PF00227 Proteasome subunit UC78_RS03225 PF01281 Ribosomal protein L9, N-terminal domain UC78_RS03225 PF03948 Ribosomal protein L9, C-terminal domain UC78_RS03230 PF00764 Arginosuccinate synthase UC78_RS03235 PF01479 S4 domain UC78_RS03240 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE UC78_RS03245 PF00005 ABC transporter UC78_RS03245 PF12399 Branched-chain amino acid ATP-binding cassette transporter UC78_RS03250 PF00309 Sigma-54 factor, Activator interacting domain (AID) UC78_RS03250 PF04963 Sigma-54 factor, core binding domain UC78_RS03250 PF04552 Sigma-54, DNA binding domain UC78_RS03265 PF03814 Potassium-transporting ATPase A subunit UC78_RS03275 PF02669 K+-transporting ATPase, c chain UC78_RS03280 PF02702 Osmosensitive K+ channel His kinase sensor domain UC78_RS03280 PF00512 His Kinase A (phospho-acceptor) domain UC78_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UC78_RS03280 PF13493 Domain of unknown function (DUF4118) UC78_RS03285 PF02151 UvrB/uvrC motif UC78_RS03285 PF12344 Ultra-violet resistance protein B UC78_RS03285 PF17757 UvrB interaction domain UC78_RS03285 PF00271 Helicase conserved C-terminal domain UC78_RS03285 PF04851 Type III restriction enzyme, res subunit UC78_RS03305 PF00270 DEAD/DEAH box helicase UC78_RS03305 PF00271 Helicase conserved C-terminal domain UC78_RS03305 PF17764 3′ DNA-binding domain (3′BD) UC78_RS03305 PF18074 Primosomal protein N C-terminal domain UC78_RS03305 PF18319 PriA DNA helicase Cys-rich region (CRR) domain UC78_RS03315 PF04551 GcpE protein UC78_RS03320 PF02107 Flagellar L-ring protein UC78_RS03325 PF01515 Phosphate acetyl/butaryl transferase UC78_RS03330 PF00871 Acetokinase family UC78_RS03345 PF01795 MraW methylase family UC78_RS03350 PF13145 PPIC-type PPIASE domain UC78_RS03355 PF02491 SHS2 domain inserted in FTSA UC78_RS03360 PF00091 Tubulin/FtsZ family, GTPase domain UC78_RS03360 PF12327 FtsZ family, C-terminal domain UC78_RS03365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UC78_RS03365 PF00460 Flagella basal body rod protein UC78_RS03370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UC78_RS03370 PF00460 Flagella basal body rod protein UC78_RS03375 PF00120 Glutamine synthetase, catalytic domain UC78_RS03375 PF03951 Glutamine synthetase, beta-Grasp domain UC78_RS03385 PF01136 Peptidase family U32 UC78_RS03390 PF00731 AIR carboxylase UC78_RS03400 PF02091 Glycyl-tRNA synthetase alpha subunit UC78_RS03405 PF01784 NIF3 (NGG1p interacting factor 3) UC78_RS03415 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) UC78_RS03415 PF02390 Putative methyltransferase UC78_RS03420 PF00849 RNA pseudouridylate synthase UC78_RS03425 PF02881 SRP54-type protein, helical bundle domain UC78_RS03425 PF00448 SRP54-type protein, GTPase domain UC78_RS03425 PF02978 Signal peptide binding domain UC78_RS03430 PF00886 Ribosomal protein S16 UC78_RS03440 PF05239 PRC-barrel domain UC78_RS03440 PF01782 RimM N-terminal domain UC78_RS03445 PF01746 tRNA (Guanine-1)-methyltransferase UC78_RS03450 PF01245 Ribosomal protein L19 UC78_RS03455 PF00576 HIUase/Transthyretin family UC78_RS03460 PF01474 Class-II DAHP synthetase family UC78_RS03465 PF03960 ArsC family UC78_RS03470 PF02811 PHP domain UC78_RS03470 PF07733 Bacterial DNA polymerase III alpha NTPase domain UC78_RS03470 PF14579 Helix-hairpin-helix motif UC78_RS03470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UC78_RS03475 PF01168 Alanine racemase, N-terminal domain UC78_RS03480 PF00669 Bacterial flagellin N-terminal helical region UC78_RS03490 PF17827 PrmC N-terminal domain UC78_RS03490 PF05175 Methyltransferase small domain UC78_RS03495 PF01435 Peptidase family M48 UC78_RS03505 PF00994 Probable molybdopterin binding domain UC78_RS03510 PF01544 CorA-like Mg2+ transporter protein UC78_RS03530 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS03540 PF08402 TOBE domain UC78_RS03540 PF00005 ABC transporter UC78_RS03550 PF00497 Bacterial extracellular solute-binding proteins, family 3 UC78_RS03615 PF01025 GrpE UC78_RS03620 PF00012 Hsp70 protein UC78_RS03635 PF00155 Aminotransferase class I and II UC78_RS03640 PF06426 Serine acetyltransferase, N-terminal UC78_RS03640 PF00132 Bacterial transferase hexapeptide (six repeats) UC78_RS03645 PF17944 Arginine decarboxylase C-terminal helical extension UC78_RS03645 PF17810 Arginine decarboxylase helical bundle domain UC78_RS03645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UC78_RS03650 PF13393 Histidyl-tRNA synthetase UC78_RS03650 PF03129 Anticodon binding domain UC78_RS03655 PF02223 Thymidylate kinase UC78_RS03660 PF01467 Cytidylyltransferase-like UC78_RS03665 PF02441 Flavoprotein UC78_RS03675 PF03180 NLPA lipoprotein UC78_RS03680 PF03180 NLPA lipoprotein UC78_RS03685 PF03180 NLPA lipoprotein UC78_RS03690 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS03695 PF09383 NIL domain UC78_RS03695 PF00005 ABC transporter UC78_RS03700 PF08264 Anticodon-binding domain of tRNA UC78_RS03700 PF00133 tRNA synthetases class I (I, L, M and V) UC78_RS03700 PF10458 Valyl tRNA synthetase tRNA binding arm UC78_RS03710 PF13361 UvrD-like helicase C-terminal domain UC78_RS03710 PF00580 UvrD/REP helicase N-terminal domain UC78_RS03720 PF08534 Redoxin UC78_RS03725 PF01568 Molydopterin dinucleotide binding domain UC78_RS03725 PF00384 Molybdopterin oxidoreductase UC78_RS03725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UC78_RS03730 PF12800 4Fe-4S binding domain UC78_RS03730 PF12838 4Fe-4S dicluster domain UC78_RS03735 PF13187 4Fe-4S dicluster domain UC78_RS03735 PF12801 4Fe-4S binding domain UC78_RS03740 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) UC78_RS03770 PF12627 Probable RNA and SrmB- binding site of polymerase A UC78_RS03770 PF01743 Poly A polymerase head domain UC78_RS03770 PF13735 tRNA nucleotidyltransferase domain 2 putative UC78_RS03775 PF01842 ACT domain UC78_RS03775 PF00551 Formyl transferase UC78_RS03780 PF00266 Aminotransferase class-V UC78_RS03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UC78_RS03790 PF00512 His Kinase A (phospho-acceptor) domain UC78_RS03800 PF08245 Mur ligase middle domain UC78_RS03800 PF02875 Mur ligase family, glutamate ligase domain UC78_RS03815 PF01820 D-ala D-ala ligase N-terminus UC78_RS03815 PF07478 D-ala D-ala ligase C-terminus UC78_RS03820 PF07499 RuvA, C-terminal domain UC78_RS03820 PF01330 RuvA N terminal domain UC78_RS03830 PF03023 Lipid II flippase MurJ UC78_RS03835 PF01406 tRNA synthetases class I (C) catalytic domain UC78_RS03835 PF09190 DALR domain UC78_RS03840 PF00664 ABC transporter transmembrane region UC78_RS03840 PF00005 ABC transporter UC78_RS03845 PF01180 Dihydroorotate dehydrogenase UC78_RS03850 PF00675 Insulinase (Peptidase family M16) UC78_RS03850 PF05193 Peptidase M16 inactive domain UC78_RS03855 PF00701 Dihydrodipicolinate synthetase family UC78_RS03870 PF00753 Metallo-beta-lactamase superfamily UC78_RS03875 PF02540 NAD synthase UC78_RS03880 PF02606 Tetraacyldisaccharide-1-P 4'-kinase UC78_RS03885 PF00291 Pyridoxal-phosphate dependent enzyme UC78_RS03890 PF02348 Cytidylyltransferase UC78_RS03900 PF00497 Bacterial extracellular solute-binding proteins, family 3 UC78_RS03905 PF00813 FliP family UC78_RS03910 PF12804 MobA-like NTP transferase domain UC78_RS03910 PF00132 Bacterial transferase hexapeptide (six repeats) UC78_RS03915 PF04127 DNA / pantothenate metabolism flavoprotein UC78_RS03915 PF02441 Flavoprotein UC78_RS03925 PF01255 Putative undecaprenyl diphosphate synthase UC78_RS03940 PF01416 tRNA pseudouridine synthase UC78_RS03945 PF13291 ACT domain UC78_RS03945 PF00291 Pyridoxal-phosphate dependent enzyme UC78_RS03960 PF05958 tRNA (Uracil-5-)-methyltransferase UC78_RS03970 PF00106 short chain dehydrogenase UC78_RS03980 PF06434 Aconitate hydratase 2 N-terminus UC78_RS03980 PF11791 Aconitate B N-terminal domain UC78_RS03980 PF00330 Aconitase family (aconitate hydratase) UC78_RS03985 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UC78_RS03985 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UC78_RS03995 PF09334 tRNA synthetases class I (M) UC78_RS03995 PF00133 tRNA synthetases class I (I, L, M and V) UC78_RS03995 PF01588 Putative tRNA binding domain UC78_RS04005 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain UC78_RS04030 PF00749 tRNA synthetases class I (E and Q), catalytic domain UC78_RS04035 PF00149 Calcineurin-like phosphoesterase UC78_RS04040 PF02666 Phosphatidylserine decarboxylase UC78_RS04045 PF01312 FlhB HrpN YscU SpaS Family UC78_RS04055 PF07690 Major Facilitator Superfamily UC78_RS04070 PF00202 Aminotransferase class-III UC78_RS04080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UC78_RS04080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UC78_RS04085 PF10502 Signal peptidase, peptidase S26 UC78_RS04090 PF00994 Probable molybdopterin binding domain UC78_RS04090 PF03454 MoeA C-terminal region (domain IV) UC78_RS04090 PF03453 MoeA N-terminal region (domain I and II) UC78_RS04095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UC78_RS04110 PF00117 Glutamine amidotransferase class-I UC78_RS04110 PF02885 Glycosyl transferase family, helical bundle domain UC78_RS04110 PF00591 Glycosyl transferase family, a/b domain UC78_RS04115 PF04715 Anthranilate synthase component I, N terminal region UC78_RS04115 PF00425 chorismate binding enzyme UC78_RS04120 PF18644 Phage integrase SAM-like domain UC78_RS04120 PF00589 Phage integrase family UC78_RS04125 PF01323 DSBA-like thioredoxin domain UC78_RS04130 PF02600 Disulfide bond formation protein DsbB UC78_RS04145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UC78_RS04180 PF00771 FHIPEP family UC78_RS04185 PF02082 Transcriptional regulator UC78_RS04190 PF00312 Ribosomal protein S15 UC78_RS04195 PF17854 FtsK alpha domain UC78_RS04195 PF09397 Ftsk gamma domain UC78_RS04195 PF01580 FtsK/SpoIIIE family UC78_RS04200 PF00700 Bacterial flagellin C-terminal helical region UC78_RS04200 PF00669 Bacterial flagellin N-terminal helical region UC78_RS04215 PF16326 ABC transporter C-terminal domain UC78_RS04215 PF00005 ABC transporter UC78_RS04215 PF12848 ABC transporter UC78_RS04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UC78_RS04220 PF00672 HAMP domain UC78_RS04220 PF00512 His Kinase A (phospho-acceptor) domain UC78_RS04225 PF00072 Response regulator receiver domain UC78_RS04225 PF00486 Transcriptional regulatory protein, C terminal UC78_RS04230 PF01842 ACT domain UC78_RS04230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UC78_RS04230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UC78_RS04240 PF00575 S1 RNA binding domain UC78_RS04245 PF02401 LytB protein UC78_RS04250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UC78_RS04255 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain UC78_RS04255 PF03484 tRNA synthetase B5 domain UC78_RS04255 PF03147 Ferredoxin-fold anticodon binding domain UC78_RS04255 PF01588 Putative tRNA binding domain UC78_RS04255 PF03483 B3/4 domain UC78_RS04260 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UC78_RS04260 PF01409 tRNA synthetases class II core domain (F) UC78_RS04265 PF01230 HIT domain UC78_RS04280 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS04285 PF00005 ABC transporter UC78_RS04290 PF01235 Sodium:alanine symporter family UC78_RS04295 PF00588 SpoU rRNA Methylase family UC78_RS04300 PF01168 Alanine racemase, N-terminal domain UC78_RS04300 PF00842 Alanine racemase, C-terminal domain UC78_RS04325 PF02630 SCO1/SenC UC78_RS04330 PF00291 Pyridoxal-phosphate dependent enzyme UC78_RS04335 PF00216 Bacterial DNA-binding protein UC78_RS04345 PF03061 Thioesterase superfamily UC78_RS04355 PF02554 Carbon starvation protein CstA UC78_RS04355 PF13722 5TM C-terminal transporter carbon starvation CstA UC78_RS04360 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UC78_RS04360 PF14572 Phosphoribosyl synthetase-associated domain UC78_RS04365 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS04370 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS04375 PF00497 Bacterial extracellular solute-binding proteins, family 3 UC78_RS04380 PF00005 ABC transporter UC78_RS04385 PF01739 CheR methyltransferase, SAM binding domain UC78_RS04390 PF01339 CheB methylesterase UC78_RS04390 PF00072 Response regulator receiver domain UC78_RS04395 PF02502 Ribose/Galactose Isomerase UC78_RS04405 PF00156 Phosphoribosyl transferase domain UC78_RS04415 PF00883 Cytosol aminopeptidase family, catalytic domain UC78_RS04420 PF06071 Protein of unknown function (DUF933) UC78_RS04420 PF01926 50S ribosome-binding GTPase UC78_RS04425 PF00206 Lyase UC78_RS04425 PF14698 Argininosuccinate lyase C-terminal UC78_RS04430 PF01293 Phosphoenolpyruvate carboxykinase UC78_RS04435 PF00364 Biotin-requiring enzyme UC78_RS04435 PF02436 Conserved carboxylase domain UC78_RS04435 PF00682 HMGL-like UC78_RS04440 PF00209 Sodium:neurotransmitter symporter family UC78_RS04445 PF00209 Sodium:neurotransmitter symporter family UC78_RS04450 PF00137 ATP synthase subunit C UC78_RS04510 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS04520 PF01043 SecA preprotein cross-linking domain UC78_RS04520 PF02810 SEC-C motif UC78_RS04520 PF07516 SecA Wing and Scaffold domain UC78_RS04520 PF07517 SecA DEAD-like domain UC78_RS04525 PF03548 Outer membrane lipoprotein carrier protein LolA UC78_RS04535 PF05970 PIF1-like helicase UC78_RS04535 PF02689 Helicase UC78_RS04545 PF00795 Carbon-nitrogen hydrolase UC78_RS04550 PF01545 Cation efflux family UC78_RS04550 PF16916 Dimerisation domain of Zinc Transporter UC78_RS04555 PF04371 Porphyromonas-type peptidyl-arginine deiminase UC78_RS04565 PF00672 HAMP domain UC78_RS04565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UC78_RS04570 PF01808 AICARFT/IMPCHase bienzyme UC78_RS04570 PF02142 MGS-like domain UC78_RS04575 PF00226 DnaJ domain UC78_RS04575 PF05099 Tellurite resistance protein TerB UC78_RS04580 PF02769 AIR synthase related protein, C-terminal domain UC78_RS04580 PF00586 AIR synthase related protein, N-terminal domain UC78_RS04580 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UC78_RS04585 PF10396 GTP-binding protein TrmE N-terminus UC78_RS04585 PF12631 MnmE helical domain UC78_RS04585 PF01926 50S ribosome-binding GTPase UC78_RS04595 PF02096 60Kd inner membrane protein UC78_RS04595 PF14849 YidC periplasmic domain UC78_RS04600 PF01809 Putative membrane protein insertion efficiency factor UC78_RS04605 PF00825 Ribonuclease P UC78_RS04610 PF00468 Ribosomal protein L34 UC78_RS04630 PF03061 Thioesterase superfamily UC78_RS04660 PF01814 Hemerythrin HHE cation binding domain UC78_RS04665 PF01814 Hemerythrin HHE cation binding domain UC78_RS04670 PF08003 Protein of unknown function (DUF1698) UC78_RS04685 PF00565 Staphylococcal nuclease homologue UC78_RS04690 PF01546 Peptidase family M20/M25/M40 UC78_RS04690 PF07687 Peptidase dimerisation domain UC78_RS04695 PF08946 Osmosensory transporter coiled coil UC78_RS04695 PF00083 Sugar (and other) transporter UC78_RS04700 PF00497 Bacterial extracellular solute-binding proteins, family 3 UC78_RS04705 PF16668 Adhesin from Campylobacter UC78_RS04710 PF03883 Peroxide stress protein YaaA UC78_RS04715 PF07687 Peptidase dimerisation domain UC78_RS04715 PF01546 Peptidase family M20/M25/M40 UC78_RS04720 PF07690 Major Facilitator Superfamily UC78_RS04735 PF17437 Family of unknown function (DUF5416) UC78_RS04740 PF13183 4Fe-4S dicluster domain UC78_RS04740 PF02754 Cysteine-rich domain UC78_RS04740 PF02665 Nitrate reductase gamma subunit UC78_RS04745 PF04055 Radical SAM superfamily UC78_RS04745 PF06969 HemN C-terminal domain UC78_RS04750 PF10788 Protein of unknown function (DUF2603) UC78_RS04755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UC78_RS04755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UC78_RS04760 PF00490 Delta-aminolevulinic acid dehydratase UC78_RS04765 PF00925 GTP cyclohydrolase II UC78_RS04770 PF02527 rRNA small subunit methyltransferase G UC78_RS04780 PF03601 Conserved hypothetical protein 698 UC78_RS04785 PF03466 LysR substrate binding domain UC78_RS04785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UC78_RS04790 PF04545 Sigma-70, region 4 UC78_RS04790 PF04539 Sigma-70 region 3 UC78_RS04790 PF04542 Sigma-70 region 2 UC78_RS04790 PF00140 Sigma-70 factor, region 1.2 UC78_RS04810 PF06480 FtsH Extracellular UC78_RS04810 PF17862 AAA+ lid domain UC78_RS04810 PF00004 ATPase family associated with various cellular activities (AAA) UC78_RS04810 PF01434 Peptidase family M41 UC78_RS04815 PF04055 Radical SAM superfamily UC78_RS04815 PF00919 Uncharacterized protein family UPF0004 UC78_RS04825 PF01761 3-dehydroquinate synthase UC78_RS04835 PF01702 Queuine tRNA-ribosyltransferase UC78_RS04855 PF01578 Cytochrome C assembly protein UC78_RS04855 PF05140 ResB-like family UC78_RS04860 PF00005 ABC transporter UC78_RS04865 PF00005 ABC transporter UC78_RS04865 PF12399 Branched-chain amino acid ATP-binding cassette transporter UC78_RS04870 PF02653 Branched-chain amino acid transport system / permease component UC78_RS04870 PF11862 Domain of unknown function (DUF3382) UC78_RS04875 PF02653 Branched-chain amino acid transport system / permease component UC78_RS04880 PF13458 Periplasmic binding protein UC78_RS04885 PF13458 Periplasmic binding protein UC78_RS04905 PF01118 Semialdehyde dehydrogenase, NAD binding domain UC78_RS04905 PF02774 Semialdehyde dehydrogenase, dimerisation domain UC78_RS04910 PF00158 Sigma-54 interaction domain UC78_RS04910 PF00072 Response regulator receiver domain UC78_RS04925 PF03989 DNA gyrase C-terminal domain, beta-propeller UC78_RS04925 PF00521 DNA gyrase/topoisomerase IV, subunit A UC78_RS04940 PF00009 Elongation factor Tu GTP binding domain UC78_RS04940 PF00679 Elongation factor G C-terminus UC78_RS04940 PF06421 GTP-binding protein LepA C-terminus UC78_RS04940 PF03144 Elongation factor Tu domain 2 UC78_RS04950 PF00529 HlyD membrane-fusion protein of T1SS UC78_RS04950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion UC78_RS04955 PF00873 AcrB/AcrD/AcrF family UC78_RS04965 PF04377 Arginine-tRNA-protein transferase, C terminus UC78_RS04965 PF04376 Arginine-tRNA-protein transferase, N terminus UC78_RS04975 PF02785 Biotin carboxylase C-terminal domain UC78_RS04975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UC78_RS04975 PF00289 Biotin carboxylase, N-terminal domain UC78_RS04980 PF01098 Cell cycle protein UC78_RS04985 PF04101 Glycosyltransferase family 28 C-terminal domain UC78_RS04985 PF03033 Glycosyltransferase family 28 N-terminal domain UC78_RS05000 PF12833 Helix-turn-helix domain UC78_RS05005 PF02581 Thiamine monophosphate synthase UC78_RS05010 PF04055 Radical SAM superfamily UC78_RS05010 PF06968 Biotin and Thiamin Synthesis associated domain UC78_RS05015 PF05690 Thiazole biosynthesis protein ThiG UC78_RS05020 PF00899 ThiF family UC78_RS05020 PF00581 Rhodanese-like domain UC78_RS05030 PF07687 Peptidase dimerisation domain UC78_RS05030 PF01546 Peptidase family M20/M25/M40 UC78_RS05040 PF02146 Sir2 family UC78_RS05045 PF01713 Smr domain UC78_RS05045 PF00488 MutS domain V UC78_RS05055 PF08245 Mur ligase middle domain UC78_RS05055 PF01225 Mur ligase family, catalytic domain UC78_RS05055 PF02875 Mur ligase family, glutamate ligase domain UC78_RS05075 PF00478 IMP dehydrogenase / GMP reductase domain UC78_RS05075 PF00571 CBS domain UC78_RS05080 PF01425 Amidase UC78_RS05090 PF00133 tRNA synthetases class I (I, L, M and V) UC78_RS05090 PF08264 Anticodon-binding domain of tRNA UC78_RS05095 PF02464 Competence-damaged protein UC78_RS05095 PF00994 Probable molybdopterin binding domain UC78_RS05100 PF00583 Acetyltransferase (GNAT) family UC78_RS05105 PF00881 Nitroreductase family UC78_RS05110 PF00881 Nitroreductase family UC78_RS05115 PF01066 CDP-alcohol phosphatidyltransferase UC78_RS05120 PF02163 Peptidase family M50 UC78_RS05120 PF17820 PDZ domain UC78_RS05125 PF04393 Protein of unknown function (DUF535) UC78_RS05135 PF07690 Major Facilitator Superfamily UC78_RS05140 PF01250 Ribosomal protein S6 UC78_RS05145 PF00436 Single-strand binding protein family UC78_RS05150 PF01084 Ribosomal protein S18 UC78_RS05155 PF02190 ATP-dependent protease La (LON) substrate-binding domain UC78_RS05155 PF00004 ATPase family associated with various cellular activities (AAA) UC78_RS05155 PF05362 Lon protease (S16) C-terminal proteolytic domain UC78_RS05165 PF02623 FliW protein UC78_RS05170 PF14748 Pyrroline-5-carboxylate reductase dimerisation UC78_RS05170 PF03807 NADP oxidoreductase coenzyme F420-dependent UC78_RS05195 PF02581 Thiamine monophosphate synthase UC78_RS05200 PF08543 Phosphomethylpyrimidine kinase UC78_RS05215 PF17757 UvrB interaction domain UC78_RS05215 PF03461 TRCF domain UC78_RS05215 PF00271 Helicase conserved C-terminal domain UC78_RS05215 PF02559 CarD-like/TRCF domain UC78_RS05215 PF00270 DEAD/DEAH box helicase UC78_RS05225 PF01551 Peptidase family M23 UC78_RS05225 PF04225 Opacity-associated protein A LysM-like domain UC78_RS05230 PF02875 Mur ligase family, glutamate ligase domain UC78_RS05230 PF08245 Mur ligase middle domain UC78_RS05245 PF13603 Leucyl-tRNA synthetase, Domain 2 UC78_RS05245 PF09334 tRNA synthetases class I (M) UC78_RS05245 PF00133 tRNA synthetases class I (I, L, M and V) UC78_RS05250 PF07549 SecD/SecF GG Motif UC78_RS05250 PF02355 Protein export membrane protein UC78_RS05255 PF02355 Protein export membrane protein UC78_RS05260 PF02699 Preprotein translocase subunit UC78_RS05270 PF02772 S-adenosylmethionine synthetase, central domain UC78_RS05270 PF02773 S-adenosylmethionine synthetase, C-terminal domain UC78_RS05270 PF00438 S-adenosylmethionine synthetase, N-terminal domain UC78_RS05275 PF00375 Sodium:dicarboxylate symporter family UC78_RS05280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UC78_RS05280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UC78_RS05285 PF01432 Peptidase family M3 UC78_RS05285 PF08439 Oligopeptidase F UC78_RS05295 PF13361 UvrD-like helicase C-terminal domain UC78_RS05295 PF00580 UvrD/REP helicase N-terminal domain UC78_RS05300 PF01509 TruB family pseudouridylate synthase (N terminal domain) UC78_RS05305 PF02599 Global regulator protein family UC78_RS05310 PF00288 GHMP kinases N terminal domain UC78_RS05315 PF01668 SmpB protein UC78_RS05325 PF02617 ATP-dependent Clp protease adaptor protein ClpS UC78_RS05330 PF00004 ATPase family associated with various cellular activities (AAA) UC78_RS05330 PF07724 AAA domain (Cdc48 subfamily) UC78_RS05330 PF17871 AAA lid domain UC78_RS05330 PF02861 Clp amino terminal domain, pathogenicity island component UC78_RS05330 PF10431 C-terminal, D2-small domain, of ClpB protein UC78_RS05335 PF03588 Leucyl/phenylalanyl-tRNA protein transferase UC78_RS05340 PF13426 PAS domain UC78_RS05340 PF08447 PAS fold UC78_RS05340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UC78_RS05345 PF01914 MarC family integral membrane protein UC78_RS05350 PF01641 SelR domain UC78_RS05355 PF04305 Protein of unknown function (DUF455) UC78_RS05360 PF01066 CDP-alcohol phosphatidyltransferase UC78_RS05370 PF01434 Peptidase family M41 UC78_RS05370 PF00004 ATPase family associated with various cellular activities (AAA) UC78_RS05370 PF17862 AAA+ lid domain UC78_RS05380 PF00072 Response regulator receiver domain UC78_RS05390 PF02719 Polysaccharide biosynthesis protein UC78_RS05395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UC78_RS05400 PF17836 PglD N-terminal domain UC78_RS05400 PF00132 Bacterial transferase hexapeptide (six repeats) UC78_RS05405 PF02397 Bacterial sugar transferase UC78_RS05410 PF13477 Glycosyl transferase 4-like UC78_RS05410 PF00534 Glycosyl transferases group 1 UC78_RS05415 PF18527 STT3/PglB C-terminal beta-barrel domain UC78_RS05415 PF02516 Oligosaccharyl transferase STT3 subunit UC78_RS05420 PF00534 Glycosyl transferases group 1 UC78_RS05420 PF13439 Glycosyltransferase Family 4 UC78_RS05425 PF00535 Glycosyl transferase family 2 UC78_RS05430 PF00534 Glycosyl transferases group 1 UC78_RS05430 PF13439 Glycosyltransferase Family 4 UC78_RS05435 PF00664 ABC transporter transmembrane region UC78_RS05435 PF00005 ABC transporter UC78_RS05440 PF16363 GDP-mannose 4,6 dehydratase UC78_RS05450 PF01075 Glycosyltransferase family 9 (heptosyltransferase) UC78_RS05455 PF03279 Bacterial lipid A biosynthesis acyltransferase UC78_RS05460 PF00535 Glycosyl transferase family 2 UC78_RS05465 PF00535 Glycosyl transferase family 2 UC78_RS05470 PF01501 Glycosyl transferase family 8 UC78_RS05470 PF00535 Glycosyl transferase family 2 UC78_RS05485 PF00535 Glycosyl transferase family 2 UC78_RS05495 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) UC78_RS05500 PF13580 SIS domain UC78_RS05505 PF00294 pfkB family carbohydrate kinase UC78_RS05505 PF01467 Cytidylyltransferase-like UC78_RS05510 PF01370 NAD dependent epimerase/dehydratase family UC78_RS05515 PF08645 Polynucleotide kinase 3 phosphatase UC78_RS05530 PF00403 Heavy-metal-associated domain UC78_RS05535 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UC78_RS05535 PF07497 Rho termination factor, RNA-binding domain UC78_RS05535 PF07498 Rho termination factor, N-terminal domain UC78_RS05540 PF12170 DNA polymerase III tau subunit V interacting with alpha UC78_RS05540 PF12169 DNA polymerase III subunits gamma and tau domain III UC78_RS05550 PF00403 Heavy-metal-associated domain UC78_RS05570 PF06738 Putative threonine/serine exporter UC78_RS05570 PF12821 Threonine/Serine exporter, ThrE UC78_RS05580 PF00056 lactate/malate dehydrogenase, NAD binding domain UC78_RS05580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UC78_RS05585 PF09335 SNARE associated Golgi protein UC78_RS05600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UC78_RS05605 PF01709 Transcriptional regulator UC78_RS05610 PF00893 Small Multidrug Resistance protein UC78_RS05615 PF00893 Small Multidrug Resistance protein UC78_RS05620 PF00750 tRNA synthetases class I (R) UC78_RS05620 PF05746 DALR anticodon binding domain UC78_RS05620 PF03485 Arginyl tRNA synthetase N terminal domain UC78_RS05625 PF02416 mttA/Hcf106 family UC78_RS05630 PF00625 Guanylate kinase UC78_RS05640 PF01311 Bacterial export proteins, family 1 UC78_RS05645 PF00005 ABC transporter UC78_RS05650 PF00889 Elongation factor TS UC78_RS05655 PF00318 Ribosomal protein S2 UC78_RS05670 PF00032 Cytochrome b(C-terminal)/b6/petD UC78_RS05670 PF00033 Cytochrome b/b6/petB UC78_RS05675 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal UC78_RS05675 PF00355 Rieske [2Fe-2S] domain UC78_RS05680 PF02040 Arsenical pump membrane protein UC78_RS05685 PF01134 Glucose inhibited division protein A UC78_RS05685 PF13932 GidA associated domain UC78_RS05695 PF13426 PAS domain UC78_RS05695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UC78_RS05695 PF08447 PAS fold UC78_RS05705 PF00375 Sodium:dicarboxylate symporter family UC78_RS05715 PF01384 Phosphate transporter family UC78_RS05720 PF01979 Amidohydrolase family UC78_RS05725 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UC78_RS05725 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus UC78_RS05730 PF02637 GatB domain UC78_RS05730 PF02934 GatB/GatE catalytic domain UC78_RS05735 PF02664 S-Ribosylhomocysteinase (LuxS) UC78_RS05740 PF14226 non-haem dioxygenase in morphine synthesis N-terminal UC78_RS05740 PF03171 2OG-Fe(II) oxygenase superfamily UC78_RS05745 PF03180 NLPA lipoprotein UC78_RS05750 PF01717 Cobalamin-independent synthase, Catalytic domain UC78_RS05750 PF08267 Cobalamin-independent synthase, N-terminal domain UC78_RS05755 PF02219 Methylenetetrahydrofolate reductase UC78_RS05765 PF00119 ATP synthase A chain UC78_RS05770 PF18073 Rubredoxin metal binding domain UC78_RS05775 PF00448 SRP54-type protein, GTPase domain UC78_RS05790 PF01966 HD domain UC78_RS05790 PF12072 Domain of unknown function (DUF3552) UC78_RS05805 PF03631 Virulence factor BrkB UC78_RS05810 PF01565 FAD binding domain UC78_RS05810 PF02913 FAD linked oxidases, C-terminal domain UC78_RS05820 PF08525 Opacity-associated protein A N-terminal motif UC78_RS05820 PF01476 LysM domain UC78_RS05820 PF01551 Peptidase family M23 UC78_RS05830 PF02578 Multi-copper polyphenol oxidoreductase laccase UC78_RS05835 PF00677 Lumazine binding domain UC78_RS05845 PF00166 Chaperonin 10 Kd subunit UC78_RS05850 PF00118 TCP-1/cpn60 chaperonin family UC78_RS05855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UC78_RS05860 PF00486 Transcriptional regulatory protein, C terminal UC78_RS05860 PF00072 Response regulator receiver domain UC78_RS05865 PF01814 Hemerythrin HHE cation binding domain UC78_RS05885 PF00486 Transcriptional regulatory protein, C terminal UC78_RS05885 PF00072 Response regulator receiver domain UC78_RS05890 PF00595 PDZ domain UC78_RS05895 PF01556 DnaJ C terminal domain UC78_RS05895 PF00226 DnaJ domain UC78_RS05900 PF13411 MerR HTH family regulatory protein UC78_RS05905 PF00999 Sodium/hydrogen exchanger family UC78_RS05905 PF02254 TrkA-N domain UC78_RS05915 PF13419 Haloacid dehalogenase-like hydrolase UC78_RS05920 PF02092 Glycyl-tRNA synthetase beta subunit UC78_RS05925 PF01551 Peptidase family M23 UC78_RS05935 PF02541 Ppx/GppA phosphatase family UC78_RS05940 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ UC78_RS05945 PF04166 Pyridoxal phosphate biosynthetic protein PdxA UC78_RS05955 PF07690 Major Facilitator Superfamily UC78_RS05965 PF01208 Uroporphyrinogen decarboxylase (URO-D) UC78_RS05970 PF04055 Radical SAM superfamily UC78_RS05980 PF08459 UvrC Helix-hairpin-helix N-terminal UC78_RS05980 PF02151 UvrB/uvrC motif UC78_RS05980 PF01541 GIY-YIG catalytic domain UC78_RS05990 PF02540 NAD synthase UC78_RS05990 PF00958 GMP synthase C terminal domain UC78_RS05990 PF00117 Glutamine amidotransferase class-I UC78_RS06000 PF02844 Phosphoribosylglycinamide synthetase, N domain UC78_RS06000 PF02843 Phosphoribosylglycinamide synthetase, C domain UC78_RS06000 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UC78_RS06015 PF03725 3' exoribonuclease family, domain 2 UC78_RS06015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain UC78_RS06015 PF00013 KH domain UC78_RS06015 PF00575 S1 RNA binding domain UC78_RS06015 PF01138 3' exoribonuclease family, domain 1 UC78_RS06030 PF07690 Major Facilitator Superfamily UC78_RS06035 PF01451 Low molecular weight phosphotyrosine protein phosphatase UC78_RS06040 PF05538 Campylobacter major outer membrane protein UC78_RS06045 PF01556 DnaJ C terminal domain UC78_RS06045 PF00684 DnaJ central domain UC78_RS06045 PF00226 DnaJ domain UC78_RS06050 PF00072 Response regulator receiver domain UC78_RS06050 PF00486 Transcriptional regulatory protein, C terminal UC78_RS06060 PF02132 RecR protein UC78_RS06060 PF13662 Toprim domain UC78_RS06065 PF01750 Hydrogenase maturation protease UC78_RS06070 PF01292 Prokaryotic cytochrome b561 UC78_RS06075 PF00374 Nickel-dependent hydrogenase UC78_RS06080 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal UC78_RS06080 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UC78_RS06080 PF10518 TAT (twin-arginine translocation) pathway signal sequence UC78_RS06085 PF01266 FAD dependent oxidoreductase UC78_RS06085 PF05430 S-adenosyl-L-methionine-dependent methyltransferase UC78_RS06090 PF01520 N-acetylmuramoyl-L-alanine amidase UC78_RS06090 PF11741 AMIN domain UC78_RS06100 PF00579 tRNA synthetases class I (W and Y) UC78_RS06105 PF02824 TGS domain UC78_RS06105 PF13291 ACT domain UC78_RS06105 PF04607 Region found in RelA / SpoT proteins UC78_RS06110 PF01192 RNA polymerase Rpb6 UC78_RS06115 PF00696 Amino acid kinase family UC78_RS06130 PF00005 ABC transporter UC78_RS06130 PF09383 NIL domain UC78_RS06135 PF02390 Putative methyltransferase UC78_RS06145 PF01479 S4 domain UC78_RS06145 PF00849 RNA pseudouridylate synthase UC78_RS06150 PF01098 Cell cycle protein UC78_RS06165 PF02386 Cation transport protein UC78_RS06170 PF02080 TrkA-C domain UC78_RS06170 PF02254 TrkA-N domain UC78_RS06175 PF02621 Menaquinone biosynthesis UC78_RS06185 PF00390 Malic enzyme, N-terminal domain UC78_RS06185 PF03949 Malic enzyme, NAD binding domain UC78_RS06185 PF01515 Phosphate acetyl/butaryl transferase UC78_RS06190 PF00749 tRNA synthetases class I (E and Q), catalytic domain UC78_RS06195 PF09312 SurA N-terminal domain UC78_RS06195 PF00639 PPIC-type PPIASE domain UC78_RS06200 PF02785 Biotin carboxylase C-terminal domain UC78_RS06200 PF00289 Biotin carboxylase, N-terminal domain UC78_RS06200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UC78_RS06205 PF00364 Biotin-requiring enzyme UC78_RS06210 PF00692 dUTPase UC78_RS06215 PF02719 Polysaccharide biosynthesis protein UC78_RS06220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UC78_RS06225 PF16254 Domain of unknown function (DUF4910) UC78_RS06225 PF09940 Domain of unknown function (DUF2172) UC78_RS06225 PF16221 winged helix-turn-helix UC78_RS06250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UC78_RS06250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UC78_RS06265 PF00501 AMP-binding enzyme UC78_RS06265 PF13193 AMP-binding enzyme C-terminal domain UC78_RS06265 PF00668 Condensation domain UC78_RS06265 PF00550 Phosphopantetheine attachment site UC78_RS06285 PF02348 Cytidylyltransferase UC78_RS06295 PF13302 Acetyltransferase (GNAT) domain UC78_RS06300 PF00977 Histidine biosynthesis protein UC78_RS06305 PF00117 Glutamine amidotransferase class-I UC78_RS06315 PF03102 NeuB family UC78_RS06315 PF08666 SAF domain UC78_RS06325 PF16363 GDP-mannose 4,6 dehydratase UC78_RS06330 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UC78_RS06340 PF03102 NeuB family UC78_RS06340 PF08666 SAF domain UC78_RS06345 PF02350 UDP-N-acetylglucosamine 2-epimerase UC78_RS06350 PF00483 Nucleotidyl transferase UC78_RS06360 PF02348 Cytidylyltransferase UC78_RS06390 PF00700 Bacterial flagellin C-terminal helical region UC78_RS06390 PF00669 Bacterial flagellin N-terminal helical region UC78_RS06390 PF07196 Flagellin hook IN motif UC78_RS06395 PF00669 Bacterial flagellin N-terminal helical region UC78_RS06395 PF07196 Flagellin hook IN motif UC78_RS06395 PF00700 Bacterial flagellin C-terminal helical region UC78_RS06415 PF08334 Type II secretion system (T2SS), protein G UC78_RS06415 PF07963 Prokaryotic N-terminal methylation motif UC78_RS06420 PF00814 Glycoprotease family UC78_RS06435 PF13288 DXP reductoisomerase C-terminal domain UC78_RS06435 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain UC78_RS06435 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase UC78_RS06450 PF05670 NFACT protein RNA binding domain UC78_RS06455 PF12804 MobA-like NTP transferase domain UC78_RS06460 PF02253 Phospholipase A1 UC78_RS06465 PF01032 FecCD transport family UC78_RS06470 PF01032 FecCD transport family UC78_RS06475 PF00005 ABC transporter UC78_RS06480 PF01497 Periplasmic binding protein UC78_RS06495 PF02335 Cytochrome c552 UC78_RS06500 PF03264 NapC/NirT cytochrome c family, N-terminal region UC78_RS06505 PF13089 Polyphosphate kinase N-terminal domain UC78_RS06505 PF17941 Polyphosphate kinase C-terminal domain 1 UC78_RS06505 PF02503 Polyphosphate kinase middle domain UC78_RS06505 PF13090 Polyphosphate kinase C-terminal domain 2 UC78_RS06530 PF05496 Holliday junction DNA helicase RuvB P-loop domain UC78_RS06530 PF17864 RuvB AAA lid domain UC78_RS06530 PF05491 RuvB C-terminal winged helix domain UC78_RS06535 PF01594 AI-2E family transporter UC78_RS06540 PF00206 Lyase UC78_RS06540 PF10415 Fumarase C C-terminus UC78_RS06545 PF01380 SIS domain UC78_RS06555 PF04055 Radical SAM superfamily UC78_RS06560 PF00860 Permease family UC78_RS06570 PF04333 MlaA lipoprotein UC78_RS06585 PF01725 Ham1 family UC78_RS06590 PF07690 Major Facilitator Superfamily UC78_RS06600 PF03841 L-seryl-tRNA selenium transferase UC78_RS06605 PF09106 Elongation factor SelB, winged helix UC78_RS06605 PF03144 Elongation factor Tu domain 2 UC78_RS06605 PF00009 Elongation factor Tu GTP binding domain UC78_RS06605 PF09107 Elongation factor SelB, winged helix UC78_RS06610 PF13098 Thioredoxin-like domain UC78_RS06620 PF00258 Flavodoxin UC78_RS06635 PF06628 Catalase-related immune-responsive UC78_RS06635 PF00199 Catalase UC78_RS06645 PF13309 HTH domain UC78_RS06645 PF08348 YheO-like PAS domain UC78_RS06650 PF01042 Endoribonuclease L-PSP UC78_RS06655 PF03606 C4-dicarboxylate anaerobic carrier UC78_RS06660 PF01053 Cys/Met metabolism PLP-dependent enzyme UC78_RS06665 PF10397 Adenylosuccinate lyase C-terminus UC78_RS06665 PF00206 Lyase UC78_RS06675 PF04023 FeoA domain UC78_RS06680 PF07664 Ferrous iron transport protein B C terminus UC78_RS06680 PF02421 Ferrous iron transport protein B UC78_RS06680 PF07670 Nucleoside recognition UC78_RS06685 PF10518 TAT (twin-arginine translocation) pathway signal sequence UC78_RS06685 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UC78_RS06685 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal UC78_RS06695 PF00121 Triosephosphate isomerase UC78_RS06700 PF00162 Phosphoglycerate kinase UC78_RS06705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UC78_RS06705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UC78_RS06710 PF01467 Cytidylyltransferase-like UC78_RS06725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UC78_RS06725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UC78_RS06725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UC78_RS06725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UC78_RS06730 PF03748 Flagellar basal body-associated protein FliL UC78_RS06735 PF01648 4'-phosphopantetheinyl transferase superfamily UC78_RS06745 PF00067 Cytochrome P450 UC78_RS06755 PF05159 Capsule polysaccharide biosynthesis protein UC78_RS06760 PF05159 Capsule polysaccharide biosynthesis protein UC78_RS06770 PF00483 Nucleotidyl transferase UC78_RS06775 PF00117 Glutamine amidotransferase class-I UC78_RS06780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain UC78_RS06780 PF00391 PEP-utilising enzyme, mobile domain UC78_RS06785 PF01209 ubiE/COQ5 methyltransferase family UC78_RS06800 PF00483 Nucleotidyl transferase UC78_RS06805 PF13580 SIS domain UC78_RS06810 PF00288 GHMP kinases N terminal domain UC78_RS06810 PF08544 GHMP kinases C terminal UC78_RS06815 PF16363 GDP-mannose 4,6 dehydratase UC78_RS06820 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family UC78_RS06825 PF01370 NAD dependent epimerase/dehydratase family UC78_RS06830 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase UC78_RS06845 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UC78_RS06855 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UC78_RS06860 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UC78_RS06865 PF01380 SIS domain UC78_RS06865 PF00571 CBS domain UC78_RS06870 PF02563 Polysaccharide biosynthesis/export protein UC78_RS06870 PF10531 SLBB domain UC78_RS06880 PF00005 ABC transporter UC78_RS06885 PF01061 ABC-2 type transporter UC78_RS06910 PF01171 PP-loop family UC78_RS06915 PF00919 Uncharacterized protein family UPF0004 UC78_RS06915 PF04055 Radical SAM superfamily UC78_RS06920 PF03462 PCRF domain UC78_RS06920 PF00472 RF-1 domain UC78_RS06930 PF01142 tRNA pseudouridine synthase D (TruD) UC78_RS06935 PF02769 AIR synthase related protein, C-terminal domain UC78_RS06935 PF00586 AIR synthase related protein, N-terminal domain UC78_RS06955 PF02119 Flagellar P-ring protein UC78_RS06975 PF07196 Flagellin hook IN motif UC78_RS06975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UC78_RS06985 PF01925 Sulfite exporter TauE/SafE UC78_RS06990 PF00482 Type II secretion system (T2SS), protein F UC78_RS06995 PF00437 Type II/IV secretion system protein UC78_RS07010 PF00263 Bacterial type II and III secretion system protein UC78_RS07010 PF07655 Secretin N-terminal domain UC78_RS07020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase UC78_RS07020 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II UC78_RS07020 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg UC78_RS07020 PF10371 Domain of unknown function UC78_RS07020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UC78_RS07025 PF13419 Haloacid dehalogenase-like hydrolase UC78_RS07030 PF00691 OmpA family UC78_RS07030 PF05736 OprF membrane domain UC78_RS07035 PF00380 Ribosomal protein S9/S16 UC78_RS07040 PF00572 Ribosomal protein L13 UC78_RS07045 PF13361 UvrD-like helicase C-terminal domain UC78_RS07045 PF00580 UvrD/REP helicase N-terminal domain UC78_RS07050 PF12705 PD-(D/E)XK nuclease superfamily UC78_RS07075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UC78_RS07075 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP UC78_RS07090 PF00115 Cytochrome C and Quinol oxidase polypeptide I UC78_RS07095 PF00072 Response regulator receiver domain UC78_RS07095 PF00486 Transcriptional regulatory protein, C terminal UC78_RS07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UC78_RS07100 PF08447 PAS fold UC78_RS07100 PF08448 PAS fold UC78_RS07110 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UC78_RS07110 PF00117 Glutamine amidotransferase class-I UC78_RS07130 PF00709 Adenylosuccinate synthetase UC78_RS07140 PF04143 Sulphur transport UC78_RS07145 PF01206 Sulfurtransferase TusA UC78_RS07150 PF00474 Sodium:solute symporter family UC78_RS07155 PF00171 Aldehyde dehydrogenase family UC78_RS07155 PF01619 Proline dehydrogenase UC78_RS07155 PF14850 DNA-binding domain of Proline dehydrogenase UC78_RS07155 PF18327 Proline utilization A proline dehydrogenase N-terminal domain UC78_RS07160 PF00586 AIR synthase related protein, N-terminal domain UC78_RS07160 PF02769 AIR synthase related protein, C-terminal domain UC78_RS07170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UC78_RS07170 PF13426 PAS domain UC78_RS07170 PF08447 PAS fold UC78_RS07180 PF02634 FdhD/NarQ family UC78_RS07190 PF13247 4Fe-4S dicluster domain UC78_RS07195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UC78_RS07195 PF01568 Molydopterin dinucleotide binding domain UC78_RS07195 PF00384 Molybdopterin oxidoreductase UC78_RS07200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UC78_RS07200 PF00037 4Fe-4S binding domain UC78_RS07200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UC78_RS07200 PF00384 Molybdopterin oxidoreductase UC78_RS07200 PF01568 Molydopterin dinucleotide binding domain UC78_RS07215 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UC78_RS07220 PF07732 Multicopper oxidase UC78_RS07220 PF07731 Multicopper oxidase UC78_RS07230 PF02391 MoaE protein UC78_RS07235 PF03454 MoeA C-terminal region (domain IV) UC78_RS07235 PF00994 Probable molybdopterin binding domain UC78_RS07235 PF03453 MoeA N-terminal region (domain I and II) UC78_RS07240 PF09827 CRISPR associated protein Cas2 UC78_RS07245 PF01867 CRISPR associated protein Cas1 UC78_RS07250 PF18541 RuvC endonuclease subdomain 3 UC78_RS07250 PF13395 HNH endonuclease UC78_RS07255 PF03606 C4-dicarboxylate anaerobic carrier UC78_RS07260 PF00586 AIR synthase related protein, N-terminal domain UC78_RS07260 PF02769 AIR synthase related protein, C-terminal domain UC78_RS07265 PF01121 Dephospho-CoA kinase UC78_RS07270 PF01678 Diaminopimelate epimerase UC78_RS07275 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase UC78_RS07285 PF00210 Ferritin-like domain UC78_RS07290 PF00342 Phosphoglucose isomerase UC78_RS07295 PF00483 Nucleotidyl transferase UC78_RS07300 PF00501 AMP-binding enzyme UC78_RS07300 PF13193 AMP-binding enzyme C-terminal domain UC78_RS07300 PF16177 Acetyl-coenzyme A synthetase N-terminus UC78_RS07305 PF00005 ABC transporter UC78_RS07310 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS07315 PF12849 PBP superfamily domain UC78_RS07320 PF03746 LamB/YcsF family UC78_RS07325 PF02682 Carboxyltransferase domain, subdomain C and D UC78_RS07330 PF02626 Carboxyltransferase domain, subdomain A and B UC78_RS07340 PF02525 Flavodoxin-like fold UC78_RS07360 PF00107 Zinc-binding dehydrogenase UC78_RS07360 PF08240 Alcohol dehydrogenase GroES-like domain UC78_RS07400 PF07690 Major Facilitator Superfamily UC78_RS07405 PF03773 Predicted permease UC78_RS07410 PF01022 Bacterial regulatory protein, arsR family UC78_RS07420 PF01758 Sodium Bile acid symporter family UC78_RS07440 PF00361 Proton-conducting membrane transporter UC78_RS07445 PF00361 Proton-conducting membrane transporter UC78_RS07450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UC78_RS07450 PF00361 Proton-conducting membrane transporter UC78_RS07455 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UC78_RS07460 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 UC78_RS07465 PF12838 4Fe-4S dicluster domain UC78_RS07470 PF00146 NADH dehydrogenase UC78_RS07475 PF00384 Molybdopterin oxidoreductase UC78_RS07475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UC78_RS07475 PF12838 4Fe-4S dicluster domain UC78_RS07475 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UC78_RS07475 PF01568 Molydopterin dinucleotide binding domain UC78_RS07490 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UC78_RS07495 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit UC78_RS07500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UC78_RS07505 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 UC78_RS07510 PF00005 ABC transporter UC78_RS07515 PF00005 ABC transporter UC78_RS07515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UC78_RS07520 PF12911 N-terminal TM domain of oligopeptide transport permease C UC78_RS07520 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS07525 PF00528 Binding-protein-dependent transport system inner membrane component UC78_RS07530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UC78_RS07535 PF01568 Molydopterin dinucleotide binding domain UC78_RS07535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UC78_RS07535 PF00384 Molybdopterin oxidoreductase UC78_RS07540 PF13247 4Fe-4S dicluster domain UC78_RS07540 PF12800 4Fe-4S binding domain UC78_RS07555 PF00970 Oxidoreductase FAD-binding domain UC78_RS07555 PF00175 Oxidoreductase NAD-binding domain UC78_RS07555 PF00042 Globin UC78_RS07560 PF00005 ABC transporter UC78_RS07565 PF07690 Major Facilitator Superfamily UC78_RS07570 PF00753 Metallo-beta-lactamase superfamily UC78_RS07575 PF01176 Translation initiation factor 1A / IF-1 UC78_RS07580 PF00444 Ribosomal protein L36 UC78_RS07585 PF00416 Ribosomal protein S13/S18 UC78_RS07590 PF00411 Ribosomal protein S11 UC78_RS07595 PF00163 Ribosomal protein S4/S9 N-terminal domain UC78_RS07595 PF01479 S4 domain UC78_RS07600 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain UC78_RS07600 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain UC78_RS07600 PF01000 RNA polymerase Rpb3/RpoA insert domain UC78_RS07605 PF01196 Ribosomal protein L17 UC78_RS07610 PF01634 ATP phosphoribosyltransferase UC78_RS07610 PF08029 HisG, C-terminal domain UC78_RS07615 PF00815 Histidinol dehydrogenase UC78_RS07620 PF08645 Polynucleotide kinase 3 phosphatase UC78_RS07620 PF00475 Imidazoleglycerol-phosphate dehydratase UC78_RS07625 PF00117 Glutamine amidotransferase class-I UC78_RS07630 PF00977 Histidine biosynthesis protein UC78_RS07635 PF00977 Histidine biosynthesis protein UC78_RS07640 PF01502 Phosphoribosyl-AMP cyclohydrolase UC78_RS07640 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase UC78_RS07645 PF14602 Hexapeptide repeat of succinyl-transferase UC78_RS07645 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle UC78_RS07650 PF01883 Iron-sulfur cluster assembly protein UC78_RS07650 PF10609 NUBPL iron-transfer P-loop NTPase UC78_RS07655 PF02542 YgbB family UC78_RS07655 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UC78_RS07660 PF00072 Response regulator receiver domain UC78_RS07660 PF00486 Transcriptional regulatory protein, C terminal UC78_RS07665 PF14306 PUA-like domain UC78_RS07665 PF01747 ATP-sulfurylase UC78_RS07670 PF04608 Phosphatidylglycerophosphatase A UC78_RS07675 PF01649 Ribosomal protein S20 UC78_RS07680 PF03462 PCRF domain UC78_RS07680 PF00472 RF-1 domain UC78_RS07685 PF01243 Pyridoxamine 5'-phosphate oxidase UC78_RS07685 PF10615 Protein of unknown function (DUF2470) UC78_RS07690 PF00593 TonB dependent receptor UC78_RS07690 PF07715 TonB-dependent Receptor Plug Domain UC78_RS07695 PF01032 FecCD transport family UC78_RS07700 PF00005 ABC transporter UC78_RS07705 PF01497 Periplasmic binding protein UC78_RS07715 PF00083 Sugar (and other) transporter UC78_RS07720 PF00730 HhH-GPD superfamily base excision DNA repair protein UC78_RS07720 PF14815 NUDIX domain UC78_RS07750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UC78_RS07750 PF01872 RibD C-terminal domain UC78_RS07760 PF03315 Serine dehydratase beta chain UC78_RS07760 PF03313 Serine dehydratase alpha chain UC78_RS07780 PF01618 MotA/TolQ/ExbB proton channel family UC78_RS07785 PF02472 Biopolymer transport protein ExbD/TolR UC78_RS07810 PF01264 Chorismate synthase UC78_RS07815 PF00035 Double-stranded RNA binding motif UC78_RS07815 PF14622 Ribonuclease-III-like UC78_RS07820 PF00075 RNase H UC78_RS07830 PF01807 CHC2 zinc finger UC78_RS07830 PF08275 DNA primase catalytic core, N-terminal domain UC78_RS07845 PF08245 Mur ligase middle domain UC78_RS07845 PF02875 Mur ligase family, glutamate ligase domain UC78_RS07850 PF02575 YbaB/EbfC DNA-binding family UC78_RS07860 PF00348 Polyprenyl synthetase UC78_RS07865 PF00456 Transketolase, thiamine diphosphate binding domain UC78_RS07865 PF02779 Transketolase, pyrimidine binding domain UC78_RS07865 PF02780 Transketolase, C-terminal domain UC78_RS07870 PF02405 Permease MlaE UC78_RS07875 PF00005 ABC transporter UC78_RS07885 PF03886 ABC-type transport auxiliary lipoprotein component UC78_RS07885 PF02470 MlaD protein UC78_RS07895 PF00557 Metallopeptidase family M24 UC78_RS07900 PF01177 Asp/Glu/Hydantoin racemase UC78_RS07905 PF00877 NlpC/P60 family UC78_RS07910 PF06965 Na+/H+ antiporter 1 UC78_RS07915 PF06965 Na+/H+ antiporter 1 UC78_RS07930 PF03239 Iron permease FTR1 family UC78_RS07935 PF10634 Fe2+ transport protein UC78_RS07950 PF00005 ABC transporter UC78_RS07950 PF02687 FtsX-like permease family UC78_RS07950 PF12704 MacB-like periplasmic core domain UC78_RS07955 PF00005 ABC transporter UC78_RS08010 PF01068 ATP dependent DNA ligase domain UC78_RS08010 PF14743 DNA ligase OB-like domain UC78_RS08025 PF00113 Enolase, C-terminal TIM barrel domain UC78_RS08025 PF03952 Enolase, N-terminal domain UC78_RS08030 PF00154 recA bacterial DNA recombination protein UC78_RS08035 PF02621 Menaquinone biosynthesis UC78_RS08040 PF01313 Bacterial export proteins, family 3 UC78_RS08045 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain UC78_RS08055 PF00459 Inositol monophosphatase family UC78_RS08060 PF00285 Citrate synthase, C-terminal domain UC78_RS08070 PF06968 Biotin and Thiamin Synthesis associated domain UC78_RS08070 PF04055 Radical SAM superfamily UC78_RS08075 PF01131 DNA topoisomerase UC78_RS08075 PF01751 Toprim domain UC78_RS08075 PF01396 Topoisomerase DNA binding C4 zinc finger UC78_RS08085 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain UC78_RS08085 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal UC78_RS08085 PF02129 X-Pro dipeptidyl-peptidase (S15 family) UC78_RS08090 PF07690 Major Facilitator Superfamily UC78_RS08095 PF00344 SecY translocase UC78_RS08100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UC78_RS08105 PF03719 Ribosomal protein S5, C-terminal domain UC78_RS08105 PF00333 Ribosomal protein S5, N-terminal domain UC78_RS08110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast UC78_RS08115 PF00347 Ribosomal protein L6 UC78_RS08120 PF00410 Ribosomal protein S8 UC78_RS08125 PF00253 Ribosomal protein S14p/S29e UC78_RS08130 PF00673 ribosomal L5P family C-terminus UC78_RS08130 PF00281 Ribosomal protein L5 UC78_RS08135 PF00467 KOW motif UC78_RS08135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 UC78_RS08140 PF00238 Ribosomal protein L14p/L23e UC78_RS08145 PF00366 Ribosomal protein S17 UC78_RS08150 PF00831 Ribosomal L29 protein UC78_RS08155 PF00252 Ribosomal protein L16p/L10e UC78_RS08160 PF00189 Ribosomal protein S3, C-terminal domain UC78_RS08160 PF07650 KH domain UC78_RS08165 PF00237 Ribosomal protein L22p/L17e UC78_RS08170 PF00203 Ribosomal protein S19 UC78_RS08175 PF03947 Ribosomal Proteins L2, C-terminal domain UC78_RS08175 PF00181 Ribosomal Proteins L2, RNA binding domain UC78_RS08180 PF00276 Ribosomal protein L23 UC78_RS08185 PF00573 Ribosomal protein L4/L1 family UC78_RS08190 PF00297 Ribosomal protein L3 UC78_RS08195 PF00338 Ribosomal protein S10p/S20e UC78_RS08200 PF01479 S4 domain UC78_RS08200 PF00849 RNA pseudouridylate synthase UC78_RS08205 PF00753 Metallo-beta-lactamase superfamily UC78_RS08205 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UC78_RS08205 PF17770 Ribonuclease J C-terminal domain UC78_RS08210 PF00398 Ribosomal RNA adenine dimethylase UC78_RS08220 PF04055 Radical SAM superfamily UC78_RS08255 PF00694 Aconitase C-terminal domain UC78_RS08260 PF00330 Aconitase family (aconitate hydratase) UC78_RS08265 PF00180 Isocitrate/isopropylmalate dehydrogenase UC78_RS08270 PF00682 HMGL-like UC78_RS08270 PF08502 LeuA allosteric (dimerisation) domain UC78_RS08285 PF14489 QueF-like protein UC78_RS08295 PF07196 Flagellin hook IN motif UC78_RS08295 PF07559 Flagellar basal body protein FlaE UC78_RS08295 PF00460 Flagella basal body rod protein UC78_RS08295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UC78_RS08300 PF02075 Crossover junction endodeoxyribonuclease RuvC UC78_RS08320 PF00535 Glycosyl transferase family 2