locus-tag class description E8M85_RS00005 PF00308 Bacterial dnaA protein E8M85_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix E8M85_RS00005 PF11638 DnaA N-terminal domain E8M85_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain E8M85_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain E8M85_RS00010 PF02767 DNA polymerase III beta subunit, central domain E8M85_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus E8M85_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E8M85_RS00015 PF01751 Toprim domain E8M85_RS00015 PF00204 DNA gyrase B E8M85_RS00030 PF03553 Na+/H+ antiporter family E8M85_RS00030 PF13726 Na+-H+ antiporter family E8M85_RS00035 PF01493 GXGXG motif E8M85_RS00035 PF01645 Conserved region in glutamate synthase E8M85_RS00035 PF00310 Glutamine amidotransferases class-II E8M85_RS00035 PF04898 Glutamate synthase central domain E8M85_RS00040 PF07992 Pyridine nucleotide-disulphide oxidoreductase E8M85_RS00040 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster E8M85_RS00045 PF01351 Ribonuclease HII E8M85_RS00055 PF02915 Rubrerythrin E8M85_RS00060 PF00920 Dehydratase family E8M85_RS00065 PF07274 Protein of unknown function (DUF1440) E8M85_RS00075 PF06508 Queuosine biosynthesis protein QueC E8M85_RS00090 PF00672 HAMP domain E8M85_RS00090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E8M85_RS00090 PF02743 Cache domain E8M85_RS00095 PF03150 Di-haem cytochrome c peroxidase E8M85_RS00095 PF00034 Cytochrome c E8M85_RS00100 PF01557 Fumarylacetoacetate (FAA) hydrolase family E8M85_RS00105 PF00849 RNA pseudouridylate synthase E8M85_RS00110 PF10397 Adenylosuccinate lyase C-terminus E8M85_RS00110 PF00206 Lyase E8M85_RS00115 PF03477 ATP cone domain E8M85_RS00115 PF02867 Ribonucleotide reductase, barrel domain E8M85_RS00115 PF00317 Ribonucleotide reductase, all-alpha domain E8M85_RS00120 PF00375 Sodium:dicarboxylate symporter family E8M85_RS00125 PF02511 Thymidylate synthase complementing protein E8M85_RS00130 PF00117 Glutamine amidotransferase class-I E8M85_RS00130 PF06418 CTP synthase N-terminus E8M85_RS00135 PF17768 RecJ OB domain E8M85_RS00135 PF02272 DHHA1 domain E8M85_RS00135 PF01368 DHH family E8M85_RS00140 PF00710 Asparaginase, N-terminal E8M85_RS00140 PF17763 Glutaminase/Asparaginase C-terminal domain E8M85_RS00180 PF01726 LexA DNA binding domain E8M85_RS00180 PF00717 Peptidase S24-like E8M85_RS00270 PF06074 Protein of unknown function (DUF935) E8M85_RS00315 PF10124 Mu-like prophage major head subunit gpT E8M85_RS00460 PF07690 Major Facilitator Superfamily E8M85_RS00495 PF03963 Flagellar hook capping protein - N-terminal region E8M85_RS00500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E8M85_RS00500 PF00460 Flagella basal body rod protein E8M85_RS00500 PF07559 Flagellar basal body protein FlaE E8M85_RS00535 PF00939 Sodium:sulfate symporter transmembrane region E8M85_RS00540 PF00939 Sodium:sulfate symporter transmembrane region E8M85_RS00580 PF04509 CheC-like family E8M85_RS00580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E8M85_RS00585 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E8M85_RS00585 PF02154 Flagellar motor switch protein FliM E8M85_RS00590 PF04545 Sigma-70, region 4 E8M85_RS00590 PF04539 Sigma-70 region 3 E8M85_RS00590 PF04542 Sigma-70 region 2 E8M85_RS00600 PF10609 NUBPL iron-transfer P-loop NTPase E8M85_RS00605 PF00448 SRP54-type protein, GTPase domain E8M85_RS00610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) E8M85_RS00615 PF01220 Dehydroquinase class II E8M85_RS00620 PF01979 Amidohydrolase family E8M85_RS00625 PF01343 Peptidase family S49 E8M85_RS00640 PF01814 Hemerythrin HHE cation binding domain E8M85_RS00650 PF11870 Domain of unknown function (DUF3390) E8M85_RS00650 PF13183 4Fe-4S dicluster domain E8M85_RS00650 PF02589 LUD domain E8M85_RS00655 PF02754 Cysteine-rich domain E8M85_RS00660 PF02652 L-lactate permease E8M85_RS00665 PF03498 Cytolethal distending toxin A/C domain E8M85_RS00670 PF03372 Endonuclease/Exonuclease/phosphatase family E8M85_RS00675 PF03498 Cytolethal distending toxin A/C domain E8M85_RS00685 PF01654 Cytochrome bd terminal oxidase subunit I E8M85_RS00690 PF02322 Cytochrome bd terminal oxidase subunit II E8M85_RS00695 PF01177 Asp/Glu/Hydantoin racemase E8M85_RS00700 PF03167 Uracil DNA glycosylase superfamily E8M85_RS00705 PF10415 Fumarase C C-terminus E8M85_RS00705 PF00206 Lyase E8M85_RS00710 PF03605 Anaerobic c4-dicarboxylate membrane transporter E8M85_RS00740 PF00829 Ribosomal prokaryotic L21 protein E8M85_RS00745 PF01016 Ribosomal L27 protein E8M85_RS00750 PF01926 50S ribosome-binding GTPase E8M85_RS00750 PF01018 GTP1/OBG E8M85_RS00755 PF00696 Amino acid kinase family E8M85_RS00760 PF00551 Formyl transferase E8M85_RS00760 PF02911 Formyl transferase, C-terminal domain E8M85_RS00765 PF08279 HTH domain E8M85_RS00765 PF02237 Biotin protein ligase C terminal domain E8M85_RS00765 PF03099 Biotin/lipoate A/B protein ligase family E8M85_RS00770 PF13614 AAA domain E8M85_RS00775 PF02195 ParB-like nuclease domain E8M85_RS00775 PF17762 HTH domain found in ParB protein E8M85_RS00785 PF00430 ATP synthase B/B' CF(0) E8M85_RS00790 PF00213 ATP synthase delta (OSCP) subunit E8M85_RS00795 PF02874 ATP synthase alpha/beta family, beta-barrel domain E8M85_RS00795 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E8M85_RS00795 PF00306 ATP synthase alpha/beta chain, C terminal domain E8M85_RS00800 PF00231 ATP synthase E8M85_RS00805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E8M85_RS00805 PF02874 ATP synthase alpha/beta family, beta-barrel domain E8M85_RS00810 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain E8M85_RS00815 PF01618 MotA/TolQ/ExbB proton channel family E8M85_RS00820 PF02472 Biopolymer transport protein ExbD/TolR E8M85_RS00835 PF00223 Photosystem I psaA/psaB protein E8M85_RS00835 PF00691 OmpA family E8M85_RS00845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E8M85_RS00850 PF00698 Acyl transferase domain E8M85_RS00855 PF01048 Phosphorylase superfamily E8M85_RS00860 PF01171 PP-loop family E8M85_RS00875 PF02130 Uncharacterized protein family UPF0054 E8M85_RS00885 PF01207 Dihydrouridine synthase (Dus) E8M85_RS00895 PF01258 Prokaryotic dksA/traR C4-type zinc finger E8M85_RS00900 PF02590 Predicted SPOUT methyltransferase E8M85_RS00905 PF17848 Acetyl-coA carboxylase zinc finger domain E8M85_RS00905 PF01039 Carboxyl transferase domain E8M85_RS00910 PF00459 Inositol monophosphatase family E8M85_RS00915 PF07244 Surface antigen variable number repeat E8M85_RS00915 PF01103 Surface antigen E8M85_RS00930 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase E8M85_RS00940 PF00288 GHMP kinases N terminal domain E8M85_RS00950 PF04760 Translation initiation factor IF-2, N-terminal region E8M85_RS00950 PF11987 Translation-initiation factor 2 E8M85_RS00950 PF00009 Elongation factor Tu GTP binding domain E8M85_RS00955 PF02033 Ribosome-binding factor A E8M85_RS00960 PF02576 RimP N-terminal domain E8M85_RS00960 PF17384 RimP C-terminal SH3 domain E8M85_RS00965 PF12102 Domain of unknown function (DUF3578) E8M85_RS00965 PF07728 AAA domain (dynein-related subfamily) E8M85_RS00975 PF00950 ABC 3 transport family E8M85_RS00980 PF00005 ABC transporter E8M85_RS00990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E8M85_RS00990 PF00672 HAMP domain E8M85_RS01000 PF07992 Pyridine nucleotide-disulphide oxidoreductase E8M85_RS01005 PF00085 Thioredoxin E8M85_RS01010 PF02021 Uncharacterised protein family UPF0102 E8M85_RS01015 PF01842 ACT domain E8M85_RS01015 PF00742 Homoserine dehydrogenase E8M85_RS01015 PF03447 Homoserine dehydrogenase, NAD binding domain E8M85_RS01020 PF00155 Aminotransferase class I and II E8M85_RS01035 PF08032 RNA 2'-O ribose methyltransferase substrate binding E8M85_RS01035 PF00588 SpoU rRNA Methylase family E8M85_RS01040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases E8M85_RS01045 PF01197 Ribosomal protein L31 E8M85_RS01050 PF04452 RNA methyltransferase E8M85_RS01075 PF04055 Radical SAM superfamily E8M85_RS01075 PF06463 Molybdenum Cofactor Synthesis C E8M85_RS01100 PF02659 Putative manganese efflux pump E8M85_RS01115 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain E8M85_RS01115 PF02777 Iron/manganese superoxide dismutases, C-terminal domain E8M85_RS01125 PF03435 Saccharopine dehydrogenase NADP binding domain E8M85_RS01125 PF16653 Saccharopine dehydrogenase C-terminal domain E8M85_RS01130 PF00005 ABC transporter E8M85_RS01130 PF08402 TOBE domain E8M85_RS01140 PF13416 Bacterial extracellular solute-binding protein E8M85_RS01155 PF07715 TonB-dependent Receptor Plug Domain E8M85_RS01155 PF00593 TonB dependent receptor E8M85_RS01160 PF01618 MotA/TolQ/ExbB proton channel family E8M85_RS01165 PF02472 Biopolymer transport protein ExbD/TolR E8M85_RS01175 PF05992 SbmA/BacA-like family E8M85_RS01180 PF01595 Cyclin M transmembrane N-terminal domain E8M85_RS01180 PF03471 Transporter associated domain E8M85_RS01180 PF00571 CBS domain E8M85_RS01190 PF03831 PhnA domain E8M85_RS01190 PF08274 PhnA Zinc-Ribbon E8M85_RS01195 PF03741 Integral membrane protein TerC family E8M85_RS01200 PF00551 Formyl transferase E8M85_RS01205 PF03853 YjeF-related protein N-terminus E8M85_RS01205 PF01256 Carbohydrate kinase E8M85_RS01215 PF01078 Magnesium chelatase, subunit ChlI E8M85_RS01215 PF13335 Magnesium chelatase, subunit ChlI C-terminal E8M85_RS01220 PF01327 Polypeptide deformylase E8M85_RS01225 PF00574 Clp protease E8M85_RS01230 PF05697 Bacterial trigger factor protein (TF) E8M85_RS01230 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase E8M85_RS01230 PF05698 Bacterial trigger factor protein (TF) C-terminus E8M85_RS01235 PF01227 GTP cyclohydrolase I E8M85_RS01240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E8M85_RS01240 PF18269 T3SS EscN ATPase C-terminal domain E8M85_RS01245 PF00156 Phosphoribosyl transferase domain E8M85_RS01250 PF05173 Dihydrodipicolinate reductase, C-terminus E8M85_RS01250 PF01113 Dihydrodipicolinate reductase, N-terminus E8M85_RS01255 PF12002 MgsA AAA+ ATPase C terminal E8M85_RS01255 PF01661 Macro domain E8M85_RS01255 PF16193 AAA C-terminal domain E8M85_RS01255 PF05496 Holliday junction DNA helicase RuvB P-loop domain E8M85_RS01280 PF03600 Citrate transporter E8M85_RS01285 PF03169 OPT oligopeptide transporter protein E8M85_RS01290 PF02673 Bacitracin resistance protein BacA E8M85_RS01295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E8M85_RS01295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E8M85_RS01295 PF03129 Anticodon binding domain E8M85_RS01300 PF05198 Translation initiation factor IF-3, N-terminal domain E8M85_RS01300 PF00707 Translation initiation factor IF-3, C-terminal domain E8M85_RS01315 PF02395 Immunoglobulin A1 protease E8M85_RS01315 PF03797 Autotransporter beta-domain E8M85_RS01345 PF01118 Semialdehyde dehydrogenase, NAD binding domain E8M85_RS01345 PF02774 Semialdehyde dehydrogenase, dimerisation domain E8M85_RS01355 PF00696 Amino acid kinase family E8M85_RS01360 PF00202 Aminotransferase class-III E8M85_RS01370 PF00132 Bacterial transferase hexapeptide (six repeats) E8M85_RS01375 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family E8M85_RS01375 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain E8M85_RS01380 PF00268 Ribonucleotide reductase, small chain E8M85_RS01390 PF00156 Phosphoribosyl transferase domain E8M85_RS01395 PF01765 Ribosome recycling factor E8M85_RS01400 PF03840 Preprotein translocase SecG subunit E8M85_RS01405 PF01027 Inhibitor of apoptosis-promoting Bax1 E8M85_RS01410 PF00484 Carbonic anhydrase E8M85_RS01415 PF00924 Mechanosensitive ion channel E8M85_RS01420 PF01592 NifU-like N terminal domain E8M85_RS01420 PF01106 NifU-like domain E8M85_RS01420 PF04324 BFD-like [2Fe-2S] binding domain E8M85_RS01425 PF00266 Aminotransferase class-V E8M85_RS01430 PF01814 Hemerythrin HHE cation binding domain E8M85_RS01440 PF01632 Ribosomal protein L35 E8M85_RS01445 PF00453 Ribosomal protein L20 E8M85_RS01450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E8M85_RS01450 PF00672 HAMP domain E8M85_RS01475 PF00083 Sugar (and other) transporter E8M85_RS01485 PF01967 MoaC family E8M85_RS01490 PF04359 Protein of unknown function (DUF493) E8M85_RS01500 PF03372 Endonuclease/Exonuclease/phosphatase family E8M85_RS01505 PF00884 Sulfatase E8M85_RS01505 PF08019 Phosphoethanolamine transferase EptA/EptB E8M85_RS01510 PF01219 Prokaryotic diacylglycerol kinase E8M85_RS01520 PF04909 Amidohydrolase E8M85_RS01530 PF01209 ubiE/COQ5 methyltransferase family E8M85_RS01535 PF02743 Cache domain E8M85_RS01535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E8M85_RS01535 PF00672 HAMP domain E8M85_RS01540 PF02535 ZIP Zinc transporter E8M85_RS01545 PF18364 Molybdopterin oxidoreductase N-terminal domain E8M85_RS01545 PF01568 Molydopterin dinucleotide binding domain E8M85_RS01545 PF00384 Molybdopterin oxidoreductase E8M85_RS01565 PF01145 SPFH domain / Band 7 family E8M85_RS01570 PF01063 Amino-transferase class IV E8M85_RS01575 PF01361 Tautomerase enzyme E8M85_RS01580 PF00578 AhpC/TSA family E8M85_RS01585 PF02677 Epoxyqueuosine reductase QueH E8M85_RS01590 PF07977 FabA-like domain E8M85_RS01595 PF00132 Bacterial transferase hexapeptide (six repeats) E8M85_RS01595 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 E8M85_RS01600 PF07724 AAA domain (Cdc48 subfamily) E8M85_RS01600 PF10431 C-terminal, D2-small domain, of ClpB protein E8M85_RS01600 PF06689 ClpX C4-type zinc finger E8M85_RS01615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain E8M85_RS01615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E8M85_RS01615 PF02142 MGS-like domain E8M85_RS01625 PF00923 Transaldolase/Fructose-6-phosphate aldolase E8M85_RS01635 PF01584 CheW-like domain E8M85_RS01640 PF00072 Response regulator receiver domain E8M85_RS01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E8M85_RS01640 PF01584 CheW-like domain E8M85_RS01640 PF02895 Signal transducing histidine kinase, homodimeric domain E8M85_RS01640 PF01627 Hpt domain E8M85_RS01645 PF01584 CheW-like domain E8M85_RS01645 PF00072 Response regulator receiver domain E8M85_RS01655 PF03449 Transcription elongation factor, N-terminal E8M85_RS01655 PF01272 Transcription elongation factor, GreA/GreB, C-term E8M85_RS01660 PF02684 Lipid-A-disaccharide synthetase E8M85_RS01675 PF01975 Survival protein SurE E8M85_RS01685 PF13673 Acetyltransferase (GNAT) domain E8M85_RS01690 PF02261 Aspartate decarboxylase E8M85_RS01695 PF02569 Pantoate-beta-alanine ligase E8M85_RS01700 PF02548 Ketopantoate hydroxymethyltransferase E8M85_RS01705 PF00905 Penicillin binding protein transpeptidase domain E8M85_RS01710 PF12857 TOBE-like domain E8M85_RS01710 PF00005 ABC transporter E8M85_RS01710 PF17850 CysA C-terminal regulatory domain E8M85_RS01715 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS01735 PF04301 Protein of unknown function (DUF452) E8M85_RS01740 PF00155 Aminotransferase class I and II E8M85_RS01745 PF00202 Aminotransferase class-III E8M85_RS01755 PF00893 Small Multidrug Resistance protein E8M85_RS01765 PF14693 Ribosomal protein TL5, C-terminal domain E8M85_RS01765 PF01386 Ribosomal L25p family E8M85_RS01770 PF01195 Peptidyl-tRNA hydrolase E8M85_RS01780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E8M85_RS01780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E8M85_RS01790 PF00800 Prephenate dehydratase E8M85_RS01790 PF01842 ACT domain E8M85_RS01790 PF01817 Chorismate mutase type II E8M85_RS01795 PF00155 Aminotransferase class I and II E8M85_RS01800 PF08345 Flagellar M-ring protein C-terminal E8M85_RS01800 PF01514 Secretory protein of YscJ/FliF family E8M85_RS01805 PF14841 FliG middle domain E8M85_RS01805 PF14842 FliG N-terminal domain E8M85_RS01805 PF01706 FliG C-terminal domain E8M85_RS01815 PF02779 Transketolase, pyrimidine binding domain E8M85_RS01815 PF13292 1-deoxy-D-xylulose-5-phosphate synthase E8M85_RS01815 PF02780 Transketolase, C-terminal domain E8M85_RS01830 PF01209 ubiE/COQ5 methyltransferase family E8M85_RS01835 PF13742 OB-fold nucleic acid binding domain E8M85_RS01835 PF02601 Exonuclease VII, large subunit E8M85_RS01840 PF00266 Aminotransferase class-V E8M85_RS01845 PF01042 Endoribonuclease L-PSP E8M85_RS01850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E8M85_RS01850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E8M85_RS01855 PF02504 Fatty acid synthesis protein E8M85_RS01860 PF01783 Ribosomal L32p protein family E8M85_RS01870 PF00334 Nucleoside diphosphate kinase E8M85_RS01875 PF00037 4Fe-4S binding domain E8M85_RS01880 PF10417 C-terminal domain of 1-Cys peroxiredoxin E8M85_RS01880 PF00578 AhpC/TSA family E8M85_RS01885 PF01312 FlhB HrpN YscU SpaS Family E8M85_RS01890 PF00691 OmpA family E8M85_RS01890 PF13677 Membrane MotB of proton-channel complex MotA/MotB E8M85_RS01895 PF01618 MotA/TolQ/ExbB proton channel family E8M85_RS01900 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain E8M85_RS01900 PF01612 3'-5' exonuclease E8M85_RS01900 PF00476 DNA polymerase family A E8M85_RS01900 PF01367 5'-3' exonuclease, C-terminal SAM fold E8M85_RS01905 PF07690 Major Facilitator Superfamily E8M85_RS01905 PF00083 Sugar (and other) transporter E8M85_RS01910 PF01156 Inosine-uridine preferring nucleoside hydrolase E8M85_RS01920 PF17755 UvrA DNA-binding domain E8M85_RS01920 PF00005 ABC transporter E8M85_RS01920 PF17760 UvrA interaction domain E8M85_RS01925 PF01925 Sulfite exporter TauE/SafE E8M85_RS01935 PF04715 Anthranilate synthase component I, N terminal region E8M85_RS01935 PF00425 chorismate binding enzyme E8M85_RS01940 PF00117 Glutamine amidotransferase class-I E8M85_RS01940 PF00591 Glycosyl transferase family, a/b domain E8M85_RS01940 PF02885 Glycosyl transferase family, helical bundle domain E8M85_RS01945 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase E8M85_RS01950 PF00291 Pyridoxal-phosphate dependent enzyme E8M85_RS01955 PF00290 Tryptophan synthase alpha chain E8M85_RS01965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term E8M85_RS01965 PF04509 CheC-like family E8M85_RS01980 PF00037 4Fe-4S binding domain E8M85_RS01985 PF00072 Response regulator receiver domain E8M85_RS01985 PF00486 Transcriptional regulatory protein, C terminal E8M85_RS01995 PF02660 Glycerol-3-phosphate acyltransferase E8M85_RS02000 PF03150 Di-haem cytochrome c peroxidase E8M85_RS02000 PF00034 Cytochrome c E8M85_RS02005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E8M85_RS02005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E8M85_RS02005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E8M85_RS02005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E8M85_RS02010 PF01252 Signal peptidase (SPase) II E8M85_RS02020 PF04055 Radical SAM superfamily E8M85_RS02020 PF06969 HemN C-terminal domain E8M85_RS02030 PF02321 Outer membrane efflux protein E8M85_RS02035 PF00873 AcrB/AcrD/AcrF family E8M85_RS02040 PF13533 Biotin-lipoyl like E8M85_RS02055 PF01165 Ribosomal protein S21 E8M85_RS02065 PF03738 Glutathionylspermidine synthase preATP-grasp E8M85_RS02070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E8M85_RS02070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E8M85_RS02075 PF04461 Protein of unknown function (DUF520) E8M85_RS02090 PF00004 ATPase family associated with various cellular activities (AAA) E8M85_RS02090 PF17862 AAA+ lid domain E8M85_RS02090 PF01434 Peptidase family M41 E8M85_RS02090 PF06480 FtsH Extracellular E8M85_RS02100 PF00174 Oxidoreductase molybdopterin binding domain E8M85_RS02110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family E8M85_RS02115 PF01029 NusB family E8M85_RS02120 PF00885 6,7-dimethyl-8-ribityllumazine synthase E8M85_RS02125 PF00793 DAHP synthetase I family E8M85_RS02135 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal E8M85_RS02135 PF01926 50S ribosome-binding GTPase E8M85_RS02140 PF01202 Shikimate kinase E8M85_RS02145 PF00579 tRNA synthetases class I (W and Y) E8M85_RS02150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E8M85_RS02150 PF02403 Seryl-tRNA synthetase N-terminal domain E8M85_RS02165 PF00224 Pyruvate kinase, barrel domain E8M85_RS02165 PF02887 Pyruvate kinase, alpha/beta domain E8M85_RS02165 PF00391 PEP-utilising enzyme, mobile domain E8M85_RS02170 PF06039 Malate:quinone oxidoreductase (Mqo) E8M85_RS02175 PF03309 Type III pantothenate kinase E8M85_RS02185 PF15437 Plasminogen-binding protein pgbA C-terminal E8M85_RS02195 PF02686 Glu-tRNAGln amidotransferase C subunit E8M85_RS02205 PF01475 Ferric uptake regulator family E8M85_RS02210 PF01336 OB-fold nucleic acid binding domain E8M85_RS02210 PF00152 tRNA synthetases class II (D, K and N) E8M85_RS02215 PF00464 Serine hydroxymethyltransferase E8M85_RS02230 PF08501 Shikimate dehydrogenase substrate binding domain E8M85_RS02240 PF01790 Prolipoprotein diacylglyceryl transferase E8M85_RS02245 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit E8M85_RS02250 PF02910 Fumarate reductase flavoprotein C-term E8M85_RS02250 PF00890 FAD binding domain E8M85_RS02255 PF13183 4Fe-4S dicluster domain E8M85_RS02255 PF13085 2Fe-2S iron-sulfur cluster binding domain E8M85_RS02260 PF10396 GTP-binding protein TrmE N-terminus E8M85_RS02260 PF01926 50S ribosome-binding GTPase E8M85_RS02260 PF12631 MnmE helical domain E8M85_RS02280 PF05199 GMC oxidoreductase E8M85_RS02280 PF00732 GMC oxidoreductase E8M85_RS02300 PF04264 YceI-like domain E8M85_RS02330 PF12848 ABC transporter E8M85_RS02330 PF00005 ABC transporter E8M85_RS02345 PF09186 Domain of unknown function (DUF1949) E8M85_RS02345 PF01205 Uncharacterized protein family UPF0029 E8M85_RS02385 PF08245 Mur ligase middle domain E8M85_RS02390 PF00953 Glycosyl transferase family 4 E8M85_RS02395 PF01676 Metalloenzyme superfamily E8M85_RS02395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) E8M85_RS02410 PF02910 Fumarate reductase flavoprotein C-term E8M85_RS02410 PF00890 FAD binding domain E8M85_RS02415 PF13183 4Fe-4S dicluster domain E8M85_RS02415 PF13085 2Fe-2S iron-sulfur cluster binding domain E8M85_RS02420 PF02754 Cysteine-rich domain E8M85_RS02425 PF03070 TENA/THI-4/PQQC family E8M85_RS02430 PF00550 Phosphopantetheine attachment site E8M85_RS02435 PF02801 Beta-ketoacyl synthase, C-terminal domain E8M85_RS02435 PF00109 Beta-ketoacyl synthase, N-terminal domain E8M85_RS02440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit E8M85_RS02455 PF07715 TonB-dependent Receptor Plug Domain E8M85_RS02455 PF00593 TonB dependent receptor E8M85_RS02460 PF00293 NUDIX domain E8M85_RS02465 PF13426 PAS domain E8M85_RS02465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E8M85_RS02465 PF08447 PAS fold E8M85_RS02475 PF00830 Ribosomal L28 family E8M85_RS02480 PF00834 Ribulose-phosphate 3 epimerase family E8M85_RS02485 PF00929 Exonuclease E8M85_RS02485 PF02811 PHP domain E8M85_RS02485 PF14480 DNA polymerase III polC-type N-terminus I E8M85_RS02485 PF14579 Helix-hairpin-helix motif E8M85_RS02485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E8M85_RS02485 PF07733 Bacterial DNA polymerase III alpha NTPase domain E8M85_RS02485 PF11490 DNA polymerase III polC-type N-terminus II E8M85_RS02490 PF01964 Radical SAM ThiC family E8M85_RS02510 PF04028 Domain of unknown function (DUF374) E8M85_RS02515 PF04055 Radical SAM superfamily E8M85_RS02515 PF00919 Uncharacterized protein family UPF0004 E8M85_RS02515 PF01938 TRAM domain E8M85_RS02525 PF08529 NusA N-terminal domain E8M85_RS02525 PF13184 NusA-like KH domain E8M85_RS02535 PF04055 Radical SAM superfamily E8M85_RS02540 PF05193 Peptidase M16 inactive domain E8M85_RS02545 PF04851 Type III restriction enzyme, res subunit E8M85_RS02545 PF00271 Helicase conserved C-terminal domain E8M85_RS02550 PF01152 Bacterial-like globin E8M85_RS02560 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS02565 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS02570 PF00005 ABC transporter E8M85_RS02595 PF03143 Elongation factor Tu C-terminal domain E8M85_RS02595 PF00009 Elongation factor Tu GTP binding domain E8M85_RS02595 PF03144 Elongation factor Tu domain 2 E8M85_RS02600 PF00471 Ribosomal protein L33 E8M85_RS02615 PF02357 Transcription termination factor nusG E8M85_RS02620 PF03946 Ribosomal protein L11, N-terminal domain E8M85_RS02620 PF00298 Ribosomal protein L11, RNA binding domain E8M85_RS02625 PF00687 Ribosomal protein L1p/L10e family E8M85_RS02630 PF00466 Ribosomal protein L10 E8M85_RS02635 PF16320 Ribosomal protein L7/L12 dimerisation domain E8M85_RS02635 PF00542 Ribosomal protein L7/L12 C-terminal domain E8M85_RS02640 PF00562 RNA polymerase Rpb2, domain 6 E8M85_RS02640 PF04560 RNA polymerase Rpb2, domain 7 E8M85_RS02640 PF04565 RNA polymerase Rpb2, domain 3 E8M85_RS02640 PF04563 RNA polymerase beta subunit E8M85_RS02640 PF04561 RNA polymerase Rpb2, domain 2 E8M85_RS02640 PF10385 RNA polymerase beta subunit external 1 domain E8M85_RS02645 PF00623 RNA polymerase Rpb1, domain 2 E8M85_RS02645 PF04998 RNA polymerase Rpb1, domain 5 E8M85_RS02645 PF04997 RNA polymerase Rpb1, domain 1 E8M85_RS02645 PF05000 RNA polymerase Rpb1, domain 4 E8M85_RS02645 PF04983 RNA polymerase Rpb1, domain 3 E8M85_RS02655 PF00701 Dihydrodipicolinate synthetase family E8M85_RS02665 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus E8M85_RS02665 PF08666 SAF domain E8M85_RS02680 PF07690 Major Facilitator Superfamily E8M85_RS02690 PF05336 L-rhamnose mutarotase E8M85_RS02700 PF00164 Ribosomal protein S12/S23 E8M85_RS02705 PF00177 Ribosomal protein S7p/S5e E8M85_RS02710 PF03144 Elongation factor Tu domain 2 E8M85_RS02710 PF14492 Elongation Factor G, domain II E8M85_RS02710 PF03764 Elongation factor G, domain IV E8M85_RS02710 PF00679 Elongation factor G C-terminus E8M85_RS02710 PF00009 Elongation factor Tu GTP binding domain E8M85_RS02740 PF00218 Indole-3-glycerol phosphate synthase E8M85_RS02760 PF00762 Ferrochelatase E8M85_RS02765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold E8M85_RS02765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain E8M85_RS02770 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E8M85_RS02775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain E8M85_RS02775 PF01411 tRNA synthetases class II (A) E8M85_RS02775 PF02272 DHHA1 domain E8M85_RS02780 PF02545 Maf-like protein E8M85_RS02785 PF00912 Transglycosylase E8M85_RS02785 PF00905 Penicillin binding protein transpeptidase domain E8M85_RS02785 PF17092 Penicillin-binding protein OB-like domain E8M85_RS02790 PF00004 ATPase family associated with various cellular activities (AAA) E8M85_RS02790 PF07724 AAA domain (Cdc48 subfamily) E8M85_RS02790 PF02861 Clp amino terminal domain, pathogenicity island component E8M85_RS02790 PF10431 C-terminal, D2-small domain, of ClpB protein E8M85_RS02790 PF17871 AAA lid domain E8M85_RS02795 PF02583 Metal-sensitive transcriptional repressor E8M85_RS02800 PF03572 Peptidase family S41 E8M85_RS02800 PF13180 PDZ domain E8M85_RS02805 PF01259 SAICAR synthetase E8M85_RS02810 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase E8M85_RS02825 PF01553 Acyltransferase E8M85_RS02830 PF02537 CrcB-like protein, Camphor Resistance (CrcB) E8M85_RS02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E8M85_RS02835 PF00183 Hsp90 protein E8M85_RS02840 PF00581 Rhodanese-like domain E8M85_RS02860 PF02049 Flagellar hook-basal body complex protein FliE E8M85_RS02865 PF00460 Flagella basal body rod protein E8M85_RS02865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E8M85_RS02870 PF00460 Flagella basal body rod protein E8M85_RS02885 PF03971 Monomeric isocitrate dehydrogenase E8M85_RS02890 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E8M85_RS02890 PF00056 lactate/malate dehydrogenase, NAD binding domain E8M85_RS02895 PF00549 CoA-ligase E8M85_RS02895 PF08442 ATP-grasp domain E8M85_RS02900 PF00549 CoA-ligase E8M85_RS02900 PF02629 CoA binding domain E8M85_RS02910 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E8M85_RS02910 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E8M85_RS02910 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E8M85_RS02915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E8M85_RS02935 PF00348 Polyprenyl synthetase E8M85_RS02940 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain E8M85_RS02940 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain E8M85_RS02940 PF01488 Shikimate / quinate 5-dehydrogenase E8M85_RS02945 PF04073 Aminoacyl-tRNA editing domain E8M85_RS02945 PF03129 Anticodon binding domain E8M85_RS02945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) E8M85_RS02955 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain E8M85_RS02955 PF03900 Porphobilinogen deaminase, C-terminal domain E8M85_RS02960 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase E8M85_RS02970 PF07196 Flagellin hook IN motif E8M85_RS02970 PF02465 Flagellar hook-associated protein 2 N-terminus E8M85_RS02970 PF07195 Flagellar hook-associated protein 2 C-terminus E8M85_RS02975 PF02561 Flagellar protein FliS E8M85_RS02990 PF09285 Elongation factor P, C-terminal E8M85_RS02990 PF08207 Elongation factor P (EF-P) KOW-like domain E8M85_RS02990 PF01132 Elongation factor P (EF-P) OB domain E8M85_RS03025 PF00171 Aldehyde dehydrogenase family E8M85_RS03030 PF07992 Pyridine nucleotide-disulphide oxidoreductase E8M85_RS03045 PF03796 DnaB-like helicase C terminal domain E8M85_RS03045 PF00772 DnaB-like helicase N terminal domain E8M85_RS03060 PF13099 Domain of unknown function (DUF3944) E8M85_RS03060 PF03981 Ubiquinol-cytochrome C chaperone E8M85_RS03065 PF03981 Ubiquinol-cytochrome C chaperone E8M85_RS03065 PF13099 Domain of unknown function (DUF3944) E8M85_RS03110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase E8M85_RS03110 PF00925 GTP cyclohydrolase II E8M85_RS03115 PF09424 Yqey-like protein E8M85_RS03120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E8M85_RS03120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain E8M85_RS03120 PF00205 Thiamine pyrophosphate enzyme, central domain E8M85_RS03125 PF10369 Small subunit of acetolactate synthase E8M85_RS03130 PF00132 Bacterial transferase hexapeptide (six repeats) E8M85_RS03130 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD E8M85_RS03135 PF02547 Queuosine biosynthesis protein E8M85_RS03140 PF00902 Sec-independent protein translocase protein (TatC) E8M85_RS03145 PF02416 mttA/Hcf106 family E8M85_RS03150 PF04055 Radical SAM superfamily E8M85_RS03150 PF06969 HemN C-terminal domain E8M85_RS03155 PF00293 NUDIX domain E8M85_RS03160 PF01842 ACT domain E8M85_RS03160 PF13840 ACT domain E8M85_RS03160 PF00696 Amino acid kinase family E8M85_RS03175 PF00809 Pterin binding enzyme E8M85_RS03180 PF00533 BRCA1 C Terminus (BRCT) domain E8M85_RS03180 PF01653 NAD-dependent DNA ligase adenylation domain E8M85_RS03180 PF03120 NAD-dependent DNA ligase OB-fold domain E8M85_RS03195 PF01687 Riboflavin kinase E8M85_RS03195 PF06574 FAD synthetase E8M85_RS03200 PF13847 Methyltransferase domain E8M85_RS03215 PF03458 UPF0126 domain E8M85_RS03225 PF10576 Iron-sulfur binding domain of endonuclease III E8M85_RS03225 PF00633 Helix-hairpin-helix motif E8M85_RS03225 PF00730 HhH-GPD superfamily base excision DNA repair protein E8M85_RS03235 PF01116 Fructose-bisphosphate aldolase class-II E8M85_RS03255 PF00209 Sodium:neurotransmitter symporter family E8M85_RS03260 PF03473 MOSC domain E8M85_RS03260 PF03475 3-alpha domain E8M85_RS03265 PF11412 Disulphide bond corrector protein DsbC E8M85_RS03265 PF02683 Cytochrome C biogenesis protein transmembrane region E8M85_RS03265 PF00085 Thioredoxin E8M85_RS03270 PF03976 Polyphosphate kinase 2 (PPK2) E8M85_RS03275 PF01546 Peptidase family M20/M25/M40 E8M85_RS03275 PF07687 Peptidase dimerisation domain E8M85_RS03280 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E8M85_RS03285 PF12704 MacB-like periplasmic core domain E8M85_RS03285 PF00005 ABC transporter E8M85_RS03285 PF02687 FtsX-like permease family E8M85_RS03290 PF02321 Outer membrane efflux protein E8M85_RS03305 PF03062 MBOAT, membrane-bound O-acyltransferase family E8M85_RS03310 PF00210 Ferritin-like domain E8M85_RS03315 PF12849 PBP superfamily domain E8M85_RS03320 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS03325 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS03330 PF00005 ABC transporter E8M85_RS03420 PF04231 Endonuclease I E8M85_RS03630 PF01554 MatE E8M85_RS03645 PF00708 Acylphosphatase E8M85_RS03645 PF17788 HypF Kae1-like domain E8M85_RS03645 PF01300 Telomere recombination E8M85_RS03645 PF07503 HypF finger E8M85_RS03650 PF02492 CobW/HypB/UreG, nucleotide-binding domain E8M85_RS03655 PF01455 HupF/HypC family E8M85_RS03660 PF01924 Hydrogenase formation hypA family E8M85_RS03665 PF02769 AIR synthase related protein, C-terminal domain E8M85_RS03665 PF00586 AIR synthase related protein, N-terminal domain E8M85_RS03670 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA E8M85_RS03690 PF00773 RNB domain E8M85_RS03695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain E8M85_RS03695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain E8M85_RS03705 PF17782 DprA winged helix domain E8M85_RS03705 PF02481 DNA recombination-mediator protein A E8M85_RS03710 PF03652 Holliday junction resolvase E8M85_RS03715 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF E8M85_RS03715 PF01189 16S rRNA methyltransferase RsmB/F E8M85_RS03715 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF E8M85_RS03720 PF01625 Peptide methionine sulfoxide reductase E8M85_RS03725 PF00719 Inorganic pyrophosphatase E8M85_RS03735 PF02938 GAD domain E8M85_RS03735 PF00152 tRNA synthetases class II (D, K and N) E8M85_RS03735 PF01336 OB-fold nucleic acid binding domain E8M85_RS03740 PF01513 ATP-NAD kinase E8M85_RS03745 PF13476 AAA domain E8M85_RS03750 PF00072 Response regulator receiver domain E8M85_RS03750 PF00990 Diguanylate cyclase, GGDEF domain E8M85_RS03755 PF01026 TatD related DNase E8M85_RS03760 PF01476 LysM domain E8M85_RS03760 PF00877 NlpC/P60 family E8M85_RS03765 PF05036 Sporulation related domain E8M85_RS03765 PF03330 Lytic transglycolase E8M85_RS03785 PF01926 50S ribosome-binding GTPase E8M85_RS03795 PF00905 Penicillin binding protein transpeptidase domain E8M85_RS03795 PF03717 Penicillin-binding Protein dimerisation domain E8M85_RS03800 PF01321 Creatinase/Prolidase N-terminal domain E8M85_RS03800 PF00557 Metallopeptidase family M24 E8M85_RS03825 PF07650 KH domain E8M85_RS03825 PF01926 50S ribosome-binding GTPase E8M85_RS03830 PF10431 C-terminal, D2-small domain, of ClpB protein E8M85_RS03830 PF07724 AAA domain (Cdc48 subfamily) E8M85_RS03835 PF00227 Proteasome subunit E8M85_RS03840 PF01281 Ribosomal protein L9, N-terminal domain E8M85_RS03840 PF03948 Ribosomal protein L9, C-terminal domain E8M85_RS03845 PF00764 Arginosuccinate synthase E8M85_RS03850 PF01479 S4 domain E8M85_RS03855 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE E8M85_RS03860 PF00005 ABC transporter E8M85_RS03860 PF12399 Branched-chain amino acid ATP-binding cassette transporter E8M85_RS03865 PF04963 Sigma-54 factor, core binding domain E8M85_RS03865 PF00309 Sigma-54 factor, Activator interacting domain (AID) E8M85_RS03865 PF04552 Sigma-54, DNA binding domain E8M85_RS03870 PF03605 Anaerobic c4-dicarboxylate membrane transporter E8M85_RS03895 PF13493 Domain of unknown function (DUF4118) E8M85_RS03895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E8M85_RS03895 PF00512 His Kinase A (phospho-acceptor) domain E8M85_RS03895 PF02702 Osmosensitive K+ channel His kinase sensor domain E8M85_RS03900 PF17757 UvrB interaction domain E8M85_RS03900 PF00271 Helicase conserved C-terminal domain E8M85_RS03900 PF02151 UvrB/uvrC motif E8M85_RS03900 PF04851 Type III restriction enzyme, res subunit E8M85_RS03900 PF12344 Ultra-violet resistance protein B E8M85_RS03920 PF00271 Helicase conserved C-terminal domain E8M85_RS03920 PF17764 3′ DNA-binding domain (3′BD) E8M85_RS03920 PF18319 PriA DNA helicase Cys-rich region (CRR) domain E8M85_RS03920 PF00270 DEAD/DEAH box helicase E8M85_RS03920 PF18074 Primosomal protein N C-terminal domain E8M85_RS03930 PF04551 GcpE protein E8M85_RS03935 PF02107 Flagellar L-ring protein E8M85_RS03940 PF01515 Phosphate acetyl/butaryl transferase E8M85_RS03945 PF00871 Acetokinase family E8M85_RS03965 PF01795 MraW methylase family E8M85_RS03970 PF13145 PPIC-type PPIASE domain E8M85_RS03975 PF02491 SHS2 domain inserted in FTSA E8M85_RS03980 PF00091 Tubulin/FtsZ family, GTPase domain E8M85_RS03980 PF12327 FtsZ family, C-terminal domain E8M85_RS03985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E8M85_RS03985 PF00460 Flagella basal body rod protein E8M85_RS03990 PF00460 Flagella basal body rod protein E8M85_RS03990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E8M85_RS03995 PF03951 Glutamine synthetase, beta-Grasp domain E8M85_RS03995 PF00120 Glutamine synthetase, catalytic domain E8M85_RS04010 PF00731 AIR carboxylase E8M85_RS04020 PF02091 Glycyl-tRNA synthetase alpha subunit E8M85_RS04025 PF01784 NIF3 (NGG1p interacting factor 3) E8M85_RS04035 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) E8M85_RS04035 PF02390 Putative methyltransferase E8M85_RS04040 PF00849 RNA pseudouridylate synthase E8M85_RS04045 PF02978 Signal peptide binding domain E8M85_RS04045 PF00448 SRP54-type protein, GTPase domain E8M85_RS04045 PF02881 SRP54-type protein, helical bundle domain E8M85_RS04050 PF00886 Ribosomal protein S16 E8M85_RS04060 PF05239 PRC-barrel domain E8M85_RS04060 PF01782 RimM N-terminal domain E8M85_RS04065 PF01746 tRNA (Guanine-1)-methyltransferase E8M85_RS04070 PF01245 Ribosomal protein L19 E8M85_RS04075 PF00576 HIUase/Transthyretin family E8M85_RS04080 PF01474 Class-II DAHP synthetase family E8M85_RS04085 PF03960 ArsC family E8M85_RS04095 PF07733 Bacterial DNA polymerase III alpha NTPase domain E8M85_RS04095 PF02811 PHP domain E8M85_RS04095 PF14579 Helix-hairpin-helix motif E8M85_RS04095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain E8M85_RS04100 PF01168 Alanine racemase, N-terminal domain E8M85_RS04105 PF00669 Bacterial flagellin N-terminal helical region E8M85_RS04115 PF05175 Methyltransferase small domain E8M85_RS04115 PF17827 PrmC N-terminal domain E8M85_RS04120 PF01435 Peptidase family M48 E8M85_RS04130 PF00994 Probable molybdopterin binding domain E8M85_RS04135 PF01544 CorA-like Mg2+ transporter protein E8M85_RS04155 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS04165 PF00005 ABC transporter E8M85_RS04165 PF08402 TOBE domain E8M85_RS04175 PF00497 Bacterial extracellular solute-binding proteins, family 3 E8M85_RS04240 PF07282 Putative transposase DNA-binding domain E8M85_RS04240 PF01385 Probable transposase E8M85_RS04240 PF12323 Helix-turn-helix domain E8M85_RS04245 PF03544 Gram-negative bacterial TonB protein C-terminal E8M85_RS04250 PF00593 TonB dependent receptor E8M85_RS04250 PF07715 TonB-dependent Receptor Plug Domain E8M85_RS04260 PF01025 GrpE E8M85_RS04265 PF00012 Hsp70 protein E8M85_RS04270 PF12706 Beta-lactamase superfamily domain E8M85_RS04280 PF00155 Aminotransferase class I and II E8M85_RS04285 PF06426 Serine acetyltransferase, N-terminal E8M85_RS04285 PF00132 Bacterial transferase hexapeptide (six repeats) E8M85_RS04290 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain E8M85_RS04290 PF17810 Arginine decarboxylase helical bundle domain E8M85_RS04290 PF17944 Arginine decarboxylase C-terminal helical extension E8M85_RS04295 PF03129 Anticodon binding domain E8M85_RS04295 PF13393 Histidyl-tRNA synthetase E8M85_RS04300 PF02223 Thymidylate kinase E8M85_RS04305 PF01467 Cytidylyltransferase-like E8M85_RS04310 PF02441 Flavoprotein E8M85_RS04320 PF03180 NLPA lipoprotein E8M85_RS04325 PF03180 NLPA lipoprotein E8M85_RS04330 PF03180 NLPA lipoprotein E8M85_RS04335 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS04340 PF00005 ABC transporter E8M85_RS04340 PF09383 NIL domain E8M85_RS04345 PF10458 Valyl tRNA synthetase tRNA binding arm E8M85_RS04345 PF00133 tRNA synthetases class I (I, L, M and V) E8M85_RS04345 PF08264 Anticodon-binding domain of tRNA E8M85_RS04355 PF13361 UvrD-like helicase C-terminal domain E8M85_RS04355 PF00580 UvrD/REP helicase N-terminal domain E8M85_RS04365 PF08534 Redoxin E8M85_RS04370 PF00384 Molybdopterin oxidoreductase E8M85_RS04370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E8M85_RS04370 PF01568 Molydopterin dinucleotide binding domain E8M85_RS04375 PF12838 4Fe-4S dicluster domain E8M85_RS04375 PF12800 4Fe-4S binding domain E8M85_RS04380 PF12801 4Fe-4S binding domain E8M85_RS04380 PF13187 4Fe-4S dicluster domain E8M85_RS04385 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) E8M85_RS04415 PF01743 Poly A polymerase head domain E8M85_RS04415 PF01966 HD domain E8M85_RS04415 PF12627 Probable RNA and SrmB- binding site of polymerase A E8M85_RS04420 PF01842 ACT domain E8M85_RS04420 PF00551 Formyl transferase E8M85_RS04425 PF00266 Aminotransferase class-V E8M85_RS04435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E8M85_RS04435 PF00512 His Kinase A (phospho-acceptor) domain E8M85_RS04445 PF01225 Mur ligase family, catalytic domain E8M85_RS04445 PF02875 Mur ligase family, glutamate ligase domain E8M85_RS04445 PF08245 Mur ligase middle domain E8M85_RS04460 PF07478 D-ala D-ala ligase C-terminus E8M85_RS04460 PF01820 D-ala D-ala ligase N-terminus E8M85_RS04465 PF01330 RuvA N terminal domain E8M85_RS04465 PF07499 RuvA, C-terminal domain E8M85_RS04475 PF03023 Lipid II flippase MurJ E8M85_RS04480 PF01406 tRNA synthetases class I (C) catalytic domain E8M85_RS04480 PF09190 DALR domain E8M85_RS04485 PF00664 ABC transporter transmembrane region E8M85_RS04485 PF00005 ABC transporter E8M85_RS04490 PF01180 Dihydroorotate dehydrogenase E8M85_RS04495 PF05193 Peptidase M16 inactive domain E8M85_RS04495 PF00675 Insulinase (Peptidase family M16) E8M85_RS04500 PF00701 Dihydrodipicolinate synthetase family E8M85_RS04515 PF00753 Metallo-beta-lactamase superfamily E8M85_RS04520 PF02540 NAD synthase E8M85_RS04525 PF02606 Tetraacyldisaccharide-1-P 4'-kinase E8M85_RS04530 PF00291 Pyridoxal-phosphate dependent enzyme E8M85_RS04535 PF02348 Cytidylyltransferase E8M85_RS04550 PF00497 Bacterial extracellular solute-binding proteins, family 3 E8M85_RS04565 PF00813 FliP family E8M85_RS04570 PF12804 MobA-like NTP transferase domain E8M85_RS04570 PF00132 Bacterial transferase hexapeptide (six repeats) E8M85_RS04575 PF02441 Flavoprotein E8M85_RS04575 PF04127 DNA / pantothenate metabolism flavoprotein E8M85_RS04585 PF01255 Putative undecaprenyl diphosphate synthase E8M85_RS04600 PF01416 tRNA pseudouridine synthase E8M85_RS04605 PF00291 Pyridoxal-phosphate dependent enzyme E8M85_RS04605 PF13291 ACT domain E8M85_RS04620 PF05958 tRNA (Uracil-5-)-methyltransferase E8M85_RS04625 PF03553 Na+/H+ antiporter family E8M85_RS04630 PF00106 short chain dehydrogenase E8M85_RS04640 PF11791 Aconitate B N-terminal domain E8M85_RS04640 PF06434 Aconitate hydratase 2 N-terminus E8M85_RS04640 PF00330 Aconitase family (aconitate hydratase) E8M85_RS04645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain E8M85_RS04645 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain E8M85_RS04655 PF09334 tRNA synthetases class I (M) E8M85_RS04655 PF00133 tRNA synthetases class I (I, L, M and V) E8M85_RS04655 PF01588 Putative tRNA binding domain E8M85_RS04665 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain E8M85_RS04690 PF00749 tRNA synthetases class I (E and Q), catalytic domain E8M85_RS04695 PF00149 Calcineurin-like phosphoesterase E8M85_RS04700 PF02666 Phosphatidylserine decarboxylase E8M85_RS04705 PF01312 FlhB HrpN YscU SpaS Family E8M85_RS04715 PF07690 Major Facilitator Superfamily E8M85_RS04730 PF00202 Aminotransferase class-III E8M85_RS04740 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain E8M85_RS04740 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain E8M85_RS04745 PF10502 Signal peptidase, peptidase S26 E8M85_RS04750 PF03453 MoeA N-terminal region (domain I and II) E8M85_RS04750 PF03454 MoeA C-terminal region (domain IV) E8M85_RS04750 PF00994 Probable molybdopterin binding domain E8M85_RS04755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E8M85_RS04765 PF00591 Glycosyl transferase family, a/b domain E8M85_RS04765 PF02885 Glycosyl transferase family, helical bundle domain E8M85_RS04765 PF00117 Glutamine amidotransferase class-I E8M85_RS04770 PF00425 chorismate binding enzyme E8M85_RS04770 PF04715 Anthranilate synthase component I, N terminal region E8M85_RS04775 PF00589 Phage integrase family E8M85_RS04775 PF18644 Phage integrase SAM-like domain E8M85_RS04785 PF02600 Disulfide bond formation protein DsbB E8M85_RS04825 PF00771 FHIPEP family E8M85_RS04830 PF02082 Transcriptional regulator E8M85_RS04835 PF00312 Ribosomal protein S15 E8M85_RS04840 PF09397 Ftsk gamma domain E8M85_RS04840 PF01580 FtsK/SpoIIIE family E8M85_RS04840 PF17854 FtsK alpha domain E8M85_RS04845 PF00669 Bacterial flagellin N-terminal helical region E8M85_RS04845 PF00700 Bacterial flagellin C-terminal helical region E8M85_RS04865 PF00512 His Kinase A (phospho-acceptor) domain E8M85_RS04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E8M85_RS04865 PF00989 PAS fold E8M85_RS04865 PF16736 Single Cache-like E8M85_RS04870 PF00072 Response regulator receiver domain E8M85_RS04870 PF00486 Transcriptional regulatory protein, C terminal E8M85_RS04875 PF01842 ACT domain E8M85_RS04875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain E8M85_RS04875 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain E8M85_RS04885 PF00575 S1 RNA binding domain E8M85_RS04890 PF02401 LytB protein E8M85_RS04895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) E8M85_RS04900 PF03483 B3/4 domain E8M85_RS04900 PF03484 tRNA synthetase B5 domain E8M85_RS04900 PF03147 Ferredoxin-fold anticodon binding domain E8M85_RS04900 PF01588 Putative tRNA binding domain E8M85_RS04900 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain E8M85_RS04905 PF01409 tRNA synthetases class II core domain (F) E8M85_RS04905 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain E8M85_RS04910 PF01230 HIT domain E8M85_RS04925 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS04930 PF00005 ABC transporter E8M85_RS04935 PF01235 Sodium:alanine symporter family E8M85_RS04940 PF00588 SpoU rRNA Methylase family E8M85_RS04945 PF00842 Alanine racemase, C-terminal domain E8M85_RS04945 PF01168 Alanine racemase, N-terminal domain E8M85_RS04970 PF02630 SCO1/SenC E8M85_RS04975 PF00291 Pyridoxal-phosphate dependent enzyme E8M85_RS04980 PF00216 Bacterial DNA-binding protein E8M85_RS04990 PF03061 Thioesterase superfamily E8M85_RS05000 PF13722 5TM C-terminal transporter carbon starvation CstA E8M85_RS05000 PF02554 Carbon starvation protein CstA E8M85_RS05005 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase E8M85_RS05005 PF14572 Phosphoribosyl synthetase-associated domain E8M85_RS05010 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS05015 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS05020 PF00497 Bacterial extracellular solute-binding proteins, family 3 E8M85_RS05025 PF00005 ABC transporter E8M85_RS05030 PF01739 CheR methyltransferase, SAM binding domain E8M85_RS05035 PF00072 Response regulator receiver domain E8M85_RS05035 PF01339 CheB methylesterase E8M85_RS05040 PF02502 Ribose/Galactose Isomerase E8M85_RS05050 PF00156 Phosphoribosyl transferase domain E8M85_RS05060 PF00883 Cytosol aminopeptidase family, catalytic domain E8M85_RS05065 PF06071 Protein of unknown function (DUF933) E8M85_RS05065 PF01926 50S ribosome-binding GTPase E8M85_RS05070 PF14698 Argininosuccinate lyase C-terminal E8M85_RS05070 PF00206 Lyase E8M85_RS05075 PF01293 Phosphoenolpyruvate carboxykinase E8M85_RS05080 PF00364 Biotin-requiring enzyme E8M85_RS05080 PF02436 Conserved carboxylase domain E8M85_RS05080 PF00682 HMGL-like E8M85_RS05085 PF00209 Sodium:neurotransmitter symporter family E8M85_RS05090 PF00209 Sodium:neurotransmitter symporter family E8M85_RS05095 PF00137 ATP synthase subunit C E8M85_RS05110 PF00501 AMP-binding enzyme E8M85_RS05110 PF01553 Acyltransferase E8M85_RS05155 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS05165 PF07517 SecA DEAD-like domain E8M85_RS05165 PF07516 SecA Wing and Scaffold domain E8M85_RS05165 PF01043 SecA preprotein cross-linking domain E8M85_RS05165 PF02810 SEC-C motif E8M85_RS05170 PF03548 Outer membrane lipoprotein carrier protein LolA E8M85_RS05180 PF02689 Helicase E8M85_RS05180 PF05970 PIF1-like helicase E8M85_RS05190 PF00795 Carbon-nitrogen hydrolase E8M85_RS05195 PF01545 Cation efflux family E8M85_RS05195 PF16916 Dimerisation domain of Zinc Transporter E8M85_RS05200 PF04371 Porphyromonas-type peptidyl-arginine deiminase E8M85_RS05225 PF00679 Elongation factor G C-terminus E8M85_RS05225 PF14492 Elongation Factor G, domain II E8M85_RS05225 PF03764 Elongation factor G, domain IV E8M85_RS05225 PF00009 Elongation factor Tu GTP binding domain E8M85_RS05245 PF01808 AICARFT/IMPCHase bienzyme E8M85_RS05245 PF02142 MGS-like domain E8M85_RS05250 PF00226 DnaJ domain E8M85_RS05250 PF05099 Tellurite resistance protein TerB E8M85_RS05255 PF02769 AIR synthase related protein, C-terminal domain E8M85_RS05255 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain E8M85_RS05255 PF00586 AIR synthase related protein, N-terminal domain E8M85_RS05260 PF01926 50S ribosome-binding GTPase E8M85_RS05260 PF12631 MnmE helical domain E8M85_RS05260 PF10396 GTP-binding protein TrmE N-terminus E8M85_RS05270 PF14849 YidC periplasmic domain E8M85_RS05270 PF02096 60Kd inner membrane protein E8M85_RS05275 PF01809 Putative membrane protein insertion efficiency factor E8M85_RS05280 PF00825 Ribonuclease P E8M85_RS05285 PF00468 Ribosomal protein L34 E8M85_RS05305 PF03061 Thioesterase superfamily E8M85_RS05330 PF08003 Protein of unknown function (DUF1698) E8M85_RS05345 PF00565 Staphylococcal nuclease homologue E8M85_RS05350 PF01546 Peptidase family M20/M25/M40 E8M85_RS05350 PF07687 Peptidase dimerisation domain E8M85_RS05355 PF08946 Osmosensory transporter coiled coil E8M85_RS05355 PF00083 Sugar (and other) transporter E8M85_RS05360 PF00497 Bacterial extracellular solute-binding proteins, family 3 E8M85_RS05365 PF16668 Adhesin from Campylobacter E8M85_RS05370 PF03883 Peroxide stress protein YaaA E8M85_RS05375 PF01546 Peptidase family M20/M25/M40 E8M85_RS05375 PF07687 Peptidase dimerisation domain E8M85_RS05380 PF07690 Major Facilitator Superfamily E8M85_RS05400 PF02754 Cysteine-rich domain E8M85_RS05400 PF02665 Nitrate reductase gamma subunit E8M85_RS05400 PF13183 4Fe-4S dicluster domain E8M85_RS05405 PF04055 Radical SAM superfamily E8M85_RS05405 PF06969 HemN C-terminal domain E8M85_RS05410 PF10788 Protein of unknown function (DUF2603) E8M85_RS05415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E8M85_RS05415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E8M85_RS05420 PF00490 Delta-aminolevulinic acid dehydratase E8M85_RS05425 PF00925 GTP cyclohydrolase II E8M85_RS05430 PF02527 rRNA small subunit methyltransferase G E8M85_RS05440 PF03601 Conserved hypothetical protein 698 E8M85_RS05445 PF03466 LysR substrate binding domain E8M85_RS05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family E8M85_RS05450 PF04545 Sigma-70, region 4 E8M85_RS05450 PF04539 Sigma-70 region 3 E8M85_RS05450 PF04542 Sigma-70 region 2 E8M85_RS05450 PF00140 Sigma-70 factor, region 1.2 E8M85_RS05470 PF00004 ATPase family associated with various cellular activities (AAA) E8M85_RS05470 PF17862 AAA+ lid domain E8M85_RS05470 PF06480 FtsH Extracellular E8M85_RS05470 PF01434 Peptidase family M41 E8M85_RS05475 PF04055 Radical SAM superfamily E8M85_RS05475 PF00919 Uncharacterized protein family UPF0004 E8M85_RS05485 PF01761 3-dehydroquinate synthase E8M85_RS05495 PF01702 Queuine tRNA-ribosyltransferase E8M85_RS05515 PF05140 ResB-like family E8M85_RS05515 PF01578 Cytochrome C assembly protein E8M85_RS05520 PF00005 ABC transporter E8M85_RS05525 PF00005 ABC transporter E8M85_RS05525 PF12399 Branched-chain amino acid ATP-binding cassette transporter E8M85_RS05530 PF02653 Branched-chain amino acid transport system / permease component E8M85_RS05530 PF11862 Domain of unknown function (DUF3382) E8M85_RS05535 PF02653 Branched-chain amino acid transport system / permease component E8M85_RS05540 PF13458 Periplasmic binding protein E8M85_RS05545 PF13458 Periplasmic binding protein E8M85_RS05565 PF02774 Semialdehyde dehydrogenase, dimerisation domain E8M85_RS05565 PF01118 Semialdehyde dehydrogenase, NAD binding domain E8M85_RS05570 PF00072 Response regulator receiver domain E8M85_RS05570 PF00158 Sigma-54 interaction domain E8M85_RS05585 PF03989 DNA gyrase C-terminal domain, beta-propeller E8M85_RS05585 PF00521 DNA gyrase/topoisomerase IV, subunit A E8M85_RS05600 PF06421 GTP-binding protein LepA C-terminus E8M85_RS05600 PF00679 Elongation factor G C-terminus E8M85_RS05600 PF00009 Elongation factor Tu GTP binding domain E8M85_RS05600 PF03144 Elongation factor Tu domain 2 E8M85_RS05610 PF00529 HlyD membrane-fusion protein of T1SS E8M85_RS05610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion E8M85_RS05615 PF00873 AcrB/AcrD/AcrF family E8M85_RS05625 PF04376 Arginine-tRNA-protein transferase, N terminus E8M85_RS05625 PF04377 Arginine-tRNA-protein transferase, C terminus E8M85_RS05635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E8M85_RS05635 PF00289 Biotin carboxylase, N-terminal domain E8M85_RS05635 PF02785 Biotin carboxylase C-terminal domain E8M85_RS05640 PF01098 Cell cycle protein E8M85_RS05645 PF03033 Glycosyltransferase family 28 N-terminal domain E8M85_RS05645 PF04101 Glycosyltransferase family 28 C-terminal domain E8M85_RS05660 PF12833 Helix-turn-helix domain E8M85_RS05665 PF02581 Thiamine monophosphate synthase E8M85_RS05670 PF06968 Biotin and Thiamin Synthesis associated domain E8M85_RS05670 PF04055 Radical SAM superfamily E8M85_RS05675 PF05690 Thiazole biosynthesis protein ThiG E8M85_RS05680 PF00899 ThiF family E8M85_RS05680 PF00581 Rhodanese-like domain E8M85_RS05690 PF07687 Peptidase dimerisation domain E8M85_RS05690 PF01546 Peptidase family M20/M25/M40 E8M85_RS05700 PF02146 Sir2 family E8M85_RS05710 PF00488 MutS domain V E8M85_RS05710 PF01713 Smr domain E8M85_RS05720 PF01225 Mur ligase family, catalytic domain E8M85_RS05720 PF02875 Mur ligase family, glutamate ligase domain E8M85_RS05720 PF08245 Mur ligase middle domain E8M85_RS05740 PF00478 IMP dehydrogenase / GMP reductase domain E8M85_RS05740 PF00571 CBS domain E8M85_RS05745 PF01425 Amidase E8M85_RS05755 PF08264 Anticodon-binding domain of tRNA E8M85_RS05755 PF00133 tRNA synthetases class I (I, L, M and V) E8M85_RS05760 PF02464 Competence-damaged protein E8M85_RS05760 PF00994 Probable molybdopterin binding domain E8M85_RS05775 PF00881 Nitroreductase family E8M85_RS05780 PF01066 CDP-alcohol phosphatidyltransferase E8M85_RS05785 PF17820 PDZ domain E8M85_RS05785 PF02163 Peptidase family M50 E8M85_RS05790 PF04393 Protein of unknown function (DUF535) E8M85_RS05795 PF01250 Ribosomal protein S6 E8M85_RS05800 PF00436 Single-strand binding protein family E8M85_RS05805 PF01084 Ribosomal protein S18 E8M85_RS05810 PF00004 ATPase family associated with various cellular activities (AAA) E8M85_RS05810 PF05362 Lon protease (S16) C-terminal proteolytic domain E8M85_RS05810 PF02190 ATP-dependent protease La (LON) substrate-binding domain E8M85_RS05820 PF02623 FliW protein E8M85_RS05825 PF14748 Pyrroline-5-carboxylate reductase dimerisation E8M85_RS05825 PF03807 NADP oxidoreductase coenzyme F420-dependent E8M85_RS05850 PF02581 Thiamine monophosphate synthase E8M85_RS05855 PF08543 Phosphomethylpyrimidine kinase E8M85_RS05870 PF00270 DEAD/DEAH box helicase E8M85_RS05870 PF17757 UvrB interaction domain E8M85_RS05870 PF00271 Helicase conserved C-terminal domain E8M85_RS05870 PF02559 CarD-like/TRCF domain E8M85_RS05870 PF03461 TRCF domain E8M85_RS05880 PF01551 Peptidase family M23 E8M85_RS05880 PF04225 Opacity-associated protein A LysM-like domain E8M85_RS05885 PF08245 Mur ligase middle domain E8M85_RS05885 PF02875 Mur ligase family, glutamate ligase domain E8M85_RS05900 PF09334 tRNA synthetases class I (M) E8M85_RS05900 PF00133 tRNA synthetases class I (I, L, M and V) E8M85_RS05900 PF13603 Leucyl-tRNA synthetase, Domain 2 E8M85_RS05905 PF07549 SecD/SecF GG Motif E8M85_RS05905 PF02355 Protein export membrane protein E8M85_RS05910 PF02355 Protein export membrane protein E8M85_RS05915 PF02699 Preprotein translocase subunit E8M85_RS05925 PF02773 S-adenosylmethionine synthetase, C-terminal domain E8M85_RS05925 PF00438 S-adenosylmethionine synthetase, N-terminal domain E8M85_RS05925 PF02772 S-adenosylmethionine synthetase, central domain E8M85_RS05930 PF00375 Sodium:dicarboxylate symporter family E8M85_RS05935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain E8M85_RS05935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain E8M85_RS05940 PF01432 Peptidase family M3 E8M85_RS05940 PF08439 Oligopeptidase F E8M85_RS05950 PF13361 UvrD-like helicase C-terminal domain E8M85_RS05950 PF00580 UvrD/REP helicase N-terminal domain E8M85_RS05955 PF01509 TruB family pseudouridylate synthase (N terminal domain) E8M85_RS05960 PF02599 Global regulator protein family E8M85_RS05965 PF00288 GHMP kinases N terminal domain E8M85_RS05970 PF01668 SmpB protein E8M85_RS05980 PF02617 ATP-dependent Clp protease adaptor protein ClpS E8M85_RS05985 PF00004 ATPase family associated with various cellular activities (AAA) E8M85_RS05985 PF07724 AAA domain (Cdc48 subfamily) E8M85_RS05985 PF17871 AAA lid domain E8M85_RS05985 PF02861 Clp amino terminal domain, pathogenicity island component E8M85_RS05985 PF10431 C-terminal, D2-small domain, of ClpB protein E8M85_RS05990 PF03588 Leucyl/phenylalanyl-tRNA protein transferase E8M85_RS05995 PF08447 PAS fold E8M85_RS05995 PF13426 PAS domain E8M85_RS05995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E8M85_RS06000 PF01914 MarC family integral membrane protein E8M85_RS06005 PF01641 SelR domain E8M85_RS06010 PF04305 Protein of unknown function (DUF455) E8M85_RS06015 PF01066 CDP-alcohol phosphatidyltransferase E8M85_RS06025 PF00004 ATPase family associated with various cellular activities (AAA) E8M85_RS06025 PF01434 Peptidase family M41 E8M85_RS06025 PF17862 AAA+ lid domain E8M85_RS06035 PF00072 Response regulator receiver domain E8M85_RS06045 PF02719 Polysaccharide biosynthesis protein E8M85_RS06050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E8M85_RS06060 PF00132 Bacterial transferase hexapeptide (six repeats) E8M85_RS06060 PF17836 PglD N-terminal domain E8M85_RS06065 PF02397 Bacterial sugar transferase E8M85_RS06070 PF13477 Glycosyl transferase 4-like E8M85_RS06070 PF00534 Glycosyl transferases group 1 E8M85_RS06075 PF18527 STT3/PglB C-terminal beta-barrel domain E8M85_RS06075 PF02516 Oligosaccharyl transferase STT3 subunit E8M85_RS06080 PF13439 Glycosyltransferase Family 4 E8M85_RS06080 PF00534 Glycosyl transferases group 1 E8M85_RS06085 PF00535 Glycosyl transferase family 2 E8M85_RS06090 PF00534 Glycosyl transferases group 1 E8M85_RS06090 PF13439 Glycosyltransferase Family 4 E8M85_RS06095 PF00005 ABC transporter E8M85_RS06095 PF00664 ABC transporter transmembrane region E8M85_RS06100 PF16363 GDP-mannose 4,6 dehydratase E8M85_RS06110 PF01075 Glycosyltransferase family 9 (heptosyltransferase) E8M85_RS06115 PF03279 Bacterial lipid A biosynthesis acyltransferase E8M85_RS06120 PF00535 Glycosyl transferase family 2 E8M85_RS06125 PF00535 Glycosyl transferase family 2 E8M85_RS06125 PF01501 Glycosyl transferase family 8 E8M85_RS06135 PF01501 Glycosyl transferase family 8 E8M85_RS06135 PF00535 Glycosyl transferase family 2 E8M85_RS06145 PF06002 Alpha-2,3-sialyltransferase (CST-I) E8M85_RS06150 PF03102 NeuB family E8M85_RS06150 PF08666 SAF domain E8M85_RS06155 PF02350 UDP-N-acetylglucosamine 2-epimerase E8M85_RS06165 PF13472 GDSL-like Lipase/Acylhydrolase family E8M85_RS06165 PF02348 Cytidylyltransferase E8M85_RS06175 PF00535 Glycosyl transferase family 2 E8M85_RS06185 PF13580 SIS domain E8M85_RS06190 PF00294 pfkB family carbohydrate kinase E8M85_RS06190 PF01467 Cytidylyltransferase-like E8M85_RS06195 PF01370 NAD dependent epimerase/dehydratase family E8M85_RS06200 PF08645 Polynucleotide kinase 3 phosphatase E8M85_RS06215 PF00403 Heavy-metal-associated domain E8M85_RS06220 PF07497 Rho termination factor, RNA-binding domain E8M85_RS06220 PF07498 Rho termination factor, N-terminal domain E8M85_RS06220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain E8M85_RS06225 PF12170 DNA polymerase III tau subunit V interacting with alpha E8M85_RS06225 PF12169 DNA polymerase III subunits gamma and tau domain III E8M85_RS06240 PF00403 Heavy-metal-associated domain E8M85_RS06260 PF12821 Threonine/Serine exporter, ThrE E8M85_RS06260 PF06738 Putative threonine/serine exporter E8M85_RS06270 PF00056 lactate/malate dehydrogenase, NAD binding domain E8M85_RS06270 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain E8M85_RS06275 PF09335 SNARE associated Golgi protein E8M85_RS06290 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD E8M85_RS06295 PF01709 Transcriptional regulator E8M85_RS06300 PF00893 Small Multidrug Resistance protein E8M85_RS06305 PF00893 Small Multidrug Resistance protein E8M85_RS06310 PF00750 tRNA synthetases class I (R) E8M85_RS06310 PF05746 DALR anticodon binding domain E8M85_RS06310 PF03485 Arginyl tRNA synthetase N terminal domain E8M85_RS06315 PF02416 mttA/Hcf106 family E8M85_RS06320 PF00625 Guanylate kinase E8M85_RS06330 PF01311 Bacterial export proteins, family 1 E8M85_RS06335 PF00005 ABC transporter E8M85_RS06340 PF00889 Elongation factor TS E8M85_RS06345 PF00318 Ribosomal protein S2 E8M85_RS06360 PF00032 Cytochrome b(C-terminal)/b6/petD E8M85_RS06360 PF00033 Cytochrome b/b6/petB E8M85_RS06365 PF00355 Rieske [2Fe-2S] domain E8M85_RS06365 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal E8M85_RS06370 PF02040 Arsenical pump membrane protein E8M85_RS06375 PF01134 Glucose inhibited division protein A E8M85_RS06375 PF13932 GidA associated domain E8M85_RS06385 PF08447 PAS fold E8M85_RS06385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E8M85_RS06385 PF13426 PAS domain E8M85_RS06395 PF00375 Sodium:dicarboxylate symporter family E8M85_RS06405 PF01384 Phosphate transporter family E8M85_RS06410 PF01979 Amidohydrolase family E8M85_RS06415 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus E8M85_RS06415 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus E8M85_RS06420 PF02637 GatB domain E8M85_RS06420 PF02934 GatB/GatE catalytic domain E8M85_RS06425 PF02664 S-Ribosylhomocysteinase (LuxS) E8M85_RS06430 PF03171 2OG-Fe(II) oxygenase superfamily E8M85_RS06430 PF14226 non-haem dioxygenase in morphine synthesis N-terminal E8M85_RS06435 PF03180 NLPA lipoprotein E8M85_RS06440 PF01717 Cobalamin-independent synthase, Catalytic domain E8M85_RS06440 PF08267 Cobalamin-independent synthase, N-terminal domain E8M85_RS06445 PF02219 Methylenetetrahydrofolate reductase E8M85_RS06455 PF00119 ATP synthase A chain E8M85_RS06460 PF18073 Rubredoxin metal binding domain E8M85_RS06465 PF00448 SRP54-type protein, GTPase domain E8M85_RS06480 PF01966 HD domain E8M85_RS06480 PF12072 Domain of unknown function (DUF3552) E8M85_RS06495 PF03631 Virulence factor BrkB E8M85_RS06500 PF02913 FAD linked oxidases, C-terminal domain E8M85_RS06500 PF01565 FAD binding domain E8M85_RS06510 PF01476 LysM domain E8M85_RS06510 PF01551 Peptidase family M23 E8M85_RS06510 PF08525 Opacity-associated protein A N-terminal motif E8M85_RS06525 PF00677 Lumazine binding domain E8M85_RS06535 PF00166 Chaperonin 10 Kd subunit E8M85_RS06540 PF00118 TCP-1/cpn60 chaperonin family E8M85_RS06545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E8M85_RS06550 PF00486 Transcriptional regulatory protein, C terminal E8M85_RS06550 PF00072 Response regulator receiver domain E8M85_RS06575 PF00486 Transcriptional regulatory protein, C terminal E8M85_RS06575 PF00072 Response regulator receiver domain E8M85_RS06580 PF00595 PDZ domain E8M85_RS06585 PF00226 DnaJ domain E8M85_RS06585 PF01556 DnaJ C terminal domain E8M85_RS06590 PF13411 MerR HTH family regulatory protein E8M85_RS06595 PF02254 TrkA-N domain E8M85_RS06595 PF00999 Sodium/hydrogen exchanger family E8M85_RS06605 PF13419 Haloacid dehalogenase-like hydrolase E8M85_RS06610 PF02092 Glycyl-tRNA synthetase beta subunit E8M85_RS06615 PF01551 Peptidase family M23 E8M85_RS06625 PF02541 Ppx/GppA phosphatase family E8M85_RS06630 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ E8M85_RS06635 PF04166 Pyridoxal phosphate biosynthetic protein PdxA E8M85_RS06645 PF07690 Major Facilitator Superfamily E8M85_RS06655 PF01208 Uroporphyrinogen decarboxylase (URO-D) E8M85_RS06660 PF04055 Radical SAM superfamily E8M85_RS06670 PF02151 UvrB/uvrC motif E8M85_RS06670 PF08459 UvrC Helix-hairpin-helix N-terminal E8M85_RS06670 PF01541 GIY-YIG catalytic domain E8M85_RS06680 PF00117 Glutamine amidotransferase class-I E8M85_RS06680 PF02540 NAD synthase E8M85_RS06680 PF00958 GMP synthase C terminal domain E8M85_RS06690 PF02844 Phosphoribosylglycinamide synthetase, N domain E8M85_RS06690 PF02843 Phosphoribosylglycinamide synthetase, C domain E8M85_RS06690 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain E8M85_RS06705 PF03725 3' exoribonuclease family, domain 2 E8M85_RS06705 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain E8M85_RS06705 PF00575 S1 RNA binding domain E8M85_RS06705 PF00013 KH domain E8M85_RS06705 PF01138 3' exoribonuclease family, domain 1 E8M85_RS06720 PF07690 Major Facilitator Superfamily E8M85_RS06725 PF01451 Low molecular weight phosphotyrosine protein phosphatase E8M85_RS06730 PF05538 Campylobacter major outer membrane protein E8M85_RS06735 PF01556 DnaJ C terminal domain E8M85_RS06735 PF00684 DnaJ central domain E8M85_RS06735 PF00226 DnaJ domain E8M85_RS06740 PF00486 Transcriptional regulatory protein, C terminal E8M85_RS06740 PF00072 Response regulator receiver domain E8M85_RS06750 PF02132 RecR protein E8M85_RS06750 PF13662 Toprim domain E8M85_RS06755 PF01750 Hydrogenase maturation protease E8M85_RS06760 PF01292 Prokaryotic cytochrome b561 E8M85_RS06765 PF00374 Nickel-dependent hydrogenase E8M85_RS06770 PF10518 TAT (twin-arginine translocation) pathway signal sequence E8M85_RS06770 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E8M85_RS06770 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E8M85_RS06775 PF05430 S-adenosyl-L-methionine-dependent methyltransferase E8M85_RS06775 PF01266 FAD dependent oxidoreductase E8M85_RS06780 PF01520 N-acetylmuramoyl-L-alanine amidase E8M85_RS06780 PF11741 AMIN domain E8M85_RS06790 PF00579 tRNA synthetases class I (W and Y) E8M85_RS06795 PF04607 Region found in RelA / SpoT proteins E8M85_RS06795 PF13291 ACT domain E8M85_RS06795 PF02824 TGS domain E8M85_RS06800 PF01192 RNA polymerase Rpb6 E8M85_RS06805 PF00696 Amino acid kinase family E8M85_RS06820 PF00005 ABC transporter E8M85_RS06820 PF09383 NIL domain E8M85_RS06825 PF02390 Putative methyltransferase E8M85_RS06835 PF01479 S4 domain E8M85_RS06835 PF00849 RNA pseudouridylate synthase E8M85_RS06840 PF01098 Cell cycle protein E8M85_RS06855 PF02386 Cation transport protein E8M85_RS06860 PF02254 TrkA-N domain E8M85_RS06860 PF02080 TrkA-C domain E8M85_RS06865 PF02621 Menaquinone biosynthesis E8M85_RS06875 PF03949 Malic enzyme, NAD binding domain E8M85_RS06875 PF00390 Malic enzyme, N-terminal domain E8M85_RS06880 PF00749 tRNA synthetases class I (E and Q), catalytic domain E8M85_RS06890 PF00289 Biotin carboxylase, N-terminal domain E8M85_RS06890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain E8M85_RS06890 PF02785 Biotin carboxylase C-terminal domain E8M85_RS06895 PF00364 Biotin-requiring enzyme E8M85_RS06900 PF00692 dUTPase E8M85_RS06905 PF02719 Polysaccharide biosynthesis protein E8M85_RS06910 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E8M85_RS06915 PF16221 winged helix-turn-helix E8M85_RS06915 PF16254 Domain of unknown function (DUF4910) E8M85_RS06915 PF09940 Domain of unknown function (DUF2172) E8M85_RS06950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal E8M85_RS06950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III E8M85_RS06975 PF00668 Condensation domain E8M85_RS06975 PF13193 AMP-binding enzyme C-terminal domain E8M85_RS06975 PF00501 AMP-binding enzyme E8M85_RS06975 PF00550 Phosphopantetheine attachment site E8M85_RS07000 PF02348 Cytidylyltransferase E8M85_RS07010 PF13302 Acetyltransferase (GNAT) domain E8M85_RS07015 PF00977 Histidine biosynthesis protein E8M85_RS07020 PF00117 Glutamine amidotransferase class-I E8M85_RS07030 PF03102 NeuB family E8M85_RS07030 PF08666 SAF domain E8M85_RS07035 PF01370 NAD dependent epimerase/dehydratase family E8M85_RS07040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family E8M85_RS07070 PF08666 SAF domain E8M85_RS07070 PF03102 NeuB family E8M85_RS07075 PF02350 UDP-N-acetylglucosamine 2-epimerase E8M85_RS07080 PF00483 Nucleotidyl transferase E8M85_RS07090 PF02348 Cytidylyltransferase E8M85_RS07120 PF07196 Flagellin hook IN motif E8M85_RS07120 PF00669 Bacterial flagellin N-terminal helical region E8M85_RS07120 PF00700 Bacterial flagellin C-terminal helical region E8M85_RS07125 PF00700 Bacterial flagellin C-terminal helical region E8M85_RS07125 PF00669 Bacterial flagellin N-terminal helical region E8M85_RS07125 PF07196 Flagellin hook IN motif E8M85_RS07145 PF07963 Prokaryotic N-terminal methylation motif E8M85_RS07145 PF08334 Type II secretion system (T2SS), protein G E8M85_RS07150 PF00814 Glycoprotease family E8M85_RS07160 PF13288 DXP reductoisomerase C-terminal domain E8M85_RS07160 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase E8M85_RS07160 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain E8M85_RS07175 PF05670 NFACT protein RNA binding domain E8M85_RS07180 PF12804 MobA-like NTP transferase domain E8M85_RS07185 PF02253 Phospholipase A1 E8M85_RS07190 PF01032 FecCD transport family E8M85_RS07195 PF01032 FecCD transport family E8M85_RS07200 PF00005 ABC transporter E8M85_RS07205 PF01497 Periplasmic binding protein E8M85_RS07220 PF02335 Cytochrome c552 E8M85_RS07225 PF03264 NapC/NirT cytochrome c family, N-terminal region E8M85_RS07230 PF13090 Polyphosphate kinase C-terminal domain 2 E8M85_RS07230 PF17941 Polyphosphate kinase C-terminal domain 1 E8M85_RS07230 PF13089 Polyphosphate kinase N-terminal domain E8M85_RS07230 PF02503 Polyphosphate kinase middle domain E8M85_RS07245 PF05491 RuvB C-terminal winged helix domain E8M85_RS07245 PF05496 Holliday junction DNA helicase RuvB P-loop domain E8M85_RS07245 PF17864 RuvB AAA lid domain E8M85_RS07250 PF01594 AI-2E family transporter E8M85_RS07255 PF00206 Lyase E8M85_RS07255 PF10415 Fumarase C C-terminus E8M85_RS07260 PF03797 Autotransporter beta-domain E8M85_RS07260 PF12951 Passenger-associated-transport-repeat E8M85_RS07260 PF00082 Subtilase family E8M85_RS07265 PF01380 SIS domain E8M85_RS07275 PF04055 Radical SAM superfamily E8M85_RS07280 PF00860 Permease family E8M85_RS07285 PF00156 Phosphoribosyl transferase domain E8M85_RS07290 PF04333 MlaA lipoprotein E8M85_RS07305 PF01725 Ham1 family E8M85_RS07310 PF07690 Major Facilitator Superfamily E8M85_RS07325 PF03841 L-seryl-tRNA selenium transferase E8M85_RS07330 PF09106 Elongation factor SelB, winged helix E8M85_RS07330 PF03144 Elongation factor Tu domain 2 E8M85_RS07330 PF00009 Elongation factor Tu GTP binding domain E8M85_RS07330 PF09107 Elongation factor SelB, winged helix E8M85_RS07335 PF13098 Thioredoxin-like domain E8M85_RS07345 PF00258 Flavodoxin E8M85_RS07360 PF00199 Catalase E8M85_RS07360 PF06628 Catalase-related immune-responsive E8M85_RS07370 PF13309 HTH domain E8M85_RS07370 PF08348 YheO-like PAS domain E8M85_RS07375 PF01042 Endoribonuclease L-PSP E8M85_RS07390 PF10397 Adenylosuccinate lyase C-terminus E8M85_RS07390 PF00206 Lyase E8M85_RS07400 PF04023 FeoA domain E8M85_RS07405 PF07664 Ferrous iron transport protein B C terminus E8M85_RS07405 PF07670 Nucleoside recognition E8M85_RS07405 PF02421 Ferrous iron transport protein B E8M85_RS07410 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E8M85_RS07410 PF10518 TAT (twin-arginine translocation) pathway signal sequence E8M85_RS07410 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal E8M85_RS07420 PF00121 Triosephosphate isomerase E8M85_RS07425 PF00162 Phosphoglycerate kinase E8M85_RS07430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain E8M85_RS07430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain E8M85_RS07435 PF01467 Cytidylyltransferase-like E8M85_RS07450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II E8M85_RS07450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III E8M85_RS07450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain E8M85_RS07450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I E8M85_RS07455 PF03748 Flagellar basal body-associated protein FliL E8M85_RS07460 PF01648 4'-phosphopantetheinyl transferase superfamily E8M85_RS07470 PF00067 Cytochrome P450 E8M85_RS07480 PF05159 Capsule polysaccharide biosynthesis protein E8M85_RS07485 PF05159 Capsule polysaccharide biosynthesis protein E8M85_RS07495 PF00483 Nucleotidyl transferase E8M85_RS07500 PF00117 Glutamine amidotransferase class-I E8M85_RS07505 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain E8M85_RS07505 PF00391 PEP-utilising enzyme, mobile domain E8M85_RS07510 PF01209 ubiE/COQ5 methyltransferase family E8M85_RS07570 PF13419 Haloacid dehalogenase-like hydrolase E8M85_RS07590 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase E8M85_RS07600 PF01467 Cytidylyltransferase-like E8M85_RS07605 PF01380 SIS domain E8M85_RS07605 PF00571 CBS domain E8M85_RS07610 PF02563 Polysaccharide biosynthesis/export protein E8M85_RS07610 PF10531 SLBB domain E8M85_RS07620 PF00005 ABC transporter E8M85_RS07625 PF01061 ABC-2 type transporter E8M85_RS07650 PF01171 PP-loop family E8M85_RS07655 PF00919 Uncharacterized protein family UPF0004 E8M85_RS07655 PF04055 Radical SAM superfamily E8M85_RS07665 PF00472 RF-1 domain E8M85_RS07665 PF03462 PCRF domain E8M85_RS07675 PF01142 tRNA pseudouridine synthase D (TruD) E8M85_RS07680 PF00586 AIR synthase related protein, N-terminal domain E8M85_RS07680 PF02769 AIR synthase related protein, C-terminal domain E8M85_RS07700 PF02119 Flagellar P-ring protein E8M85_RS07720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E8M85_RS07720 PF07196 Flagellin hook IN motif E8M85_RS07730 PF01925 Sulfite exporter TauE/SafE E8M85_RS07735 PF00482 Type II secretion system (T2SS), protein F E8M85_RS07755 PF07655 Secretin N-terminal domain E8M85_RS07755 PF00263 Bacterial type II and III secretion system protein E8M85_RS07765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E8M85_RS07765 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg E8M85_RS07765 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II E8M85_RS07765 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase E8M85_RS07765 PF10371 Domain of unknown function E8M85_RS07770 PF13419 Haloacid dehalogenase-like hydrolase E8M85_RS07775 PF00691 OmpA family E8M85_RS07775 PF05736 OprF membrane domain E8M85_RS07780 PF00380 Ribosomal protein S9/S16 E8M85_RS07785 PF00572 Ribosomal protein L13 E8M85_RS07790 PF00580 UvrD/REP helicase N-terminal domain E8M85_RS07790 PF13361 UvrD-like helicase C-terminal domain E8M85_RS07795 PF12705 PD-(D/E)XK nuclease superfamily E8M85_RS07820 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP E8M85_RS07820 PF13442 Cytochrome C oxidase, cbb3-type, subunit III E8M85_RS07835 PF00115 Cytochrome C and Quinol oxidase polypeptide I E8M85_RS07840 PF00486 Transcriptional regulatory protein, C terminal E8M85_RS07840 PF00072 Response regulator receiver domain E8M85_RS07845 PF08448 PAS fold E8M85_RS07845 PF08447 PAS fold E8M85_RS07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase E8M85_RS07855 PF00117 Glutamine amidotransferase class-I E8M85_RS07855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain E8M85_RS07875 PF00709 Adenylosuccinate synthetase E8M85_RS07885 PF04143 Sulphur transport E8M85_RS07890 PF01206 Sulfurtransferase TusA E8M85_RS07895 PF00474 Sodium:solute symporter family E8M85_RS07900 PF18327 Proline utilization A proline dehydrogenase N-terminal domain E8M85_RS07900 PF14850 DNA-binding domain of Proline dehydrogenase E8M85_RS07900 PF01619 Proline dehydrogenase E8M85_RS07900 PF00171 Aldehyde dehydrogenase family E8M85_RS07915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E8M85_RS07915 PF13426 PAS domain E8M85_RS07915 PF08447 PAS fold E8M85_RS07925 PF02634 FdhD/NarQ family E8M85_RS07935 PF13247 4Fe-4S dicluster domain E8M85_RS07955 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain E8M85_RS07960 PF07731 Multicopper oxidase E8M85_RS07960 PF07732 Multicopper oxidase E8M85_RS07970 PF02391 MoaE protein E8M85_RS07980 PF03453 MoeA N-terminal region (domain I and II) E8M85_RS07980 PF03454 MoeA C-terminal region (domain IV) E8M85_RS07980 PF00994 Probable molybdopterin binding domain E8M85_RS07985 PF09827 CRISPR associated protein Cas2 E8M85_RS07990 PF01867 CRISPR associated protein Cas1 E8M85_RS07995 PF13395 HNH endonuclease E8M85_RS07995 PF18541 RuvC endonuclease subdomain 3 E8M85_RS08010 PF02769 AIR synthase related protein, C-terminal domain E8M85_RS08010 PF00586 AIR synthase related protein, N-terminal domain E8M85_RS08015 PF01121 Dephospho-CoA kinase E8M85_RS08020 PF01678 Diaminopimelate epimerase E8M85_RS08025 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase E8M85_RS08035 PF00210 Ferritin-like domain E8M85_RS08040 PF00342 Phosphoglucose isomerase E8M85_RS08045 PF00483 Nucleotidyl transferase E8M85_RS08050 PF16177 Acetyl-coenzyme A synthetase N-terminus E8M85_RS08050 PF00501 AMP-binding enzyme E8M85_RS08050 PF13193 AMP-binding enzyme C-terminal domain E8M85_RS08055 PF00005 ABC transporter E8M85_RS08060 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS08065 PF12849 PBP superfamily domain E8M85_RS08070 PF03746 LamB/YcsF family E8M85_RS08075 PF02682 Carboxyltransferase domain, subdomain C and D E8M85_RS08080 PF02626 Carboxyltransferase domain, subdomain A and B E8M85_RS08090 PF02525 Flavodoxin-like fold E8M85_RS08095 PF01638 HxlR-like helix-turn-helix E8M85_RS08105 PF08240 Alcohol dehydrogenase GroES-like domain E8M85_RS08105 PF00107 Zinc-binding dehydrogenase E8M85_RS08110 PF18766 SWI2/SNF2 ATPase E8M85_RS08110 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) E8M85_RS08110 PF11867 Domain of unknown function (DUF3387) E8M85_RS08130 PF02384 N-6 DNA Methylase E8M85_RS08140 PF13460 NAD(P)H-binding E8M85_RS08145 PF01638 HxlR-like helix-turn-helix E8M85_RS08165 PF00672 HAMP domain E8M85_RS08165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain E8M85_RS08165 PF17200 Single Cache domain 2 E8M85_RS08175 PF00361 Proton-conducting membrane transporter E8M85_RS08180 PF00361 Proton-conducting membrane transporter E8M85_RS08185 PF00361 Proton-conducting membrane transporter E8M85_RS08185 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus E8M85_RS08190 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L E8M85_RS08195 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 E8M85_RS08200 PF12838 4Fe-4S dicluster domain E8M85_RS08205 PF00146 NADH dehydrogenase E8M85_RS08210 PF12838 4Fe-4S dicluster domain E8M85_RS08210 PF00384 Molybdopterin oxidoreductase E8M85_RS08210 PF01568 Molydopterin dinucleotide binding domain E8M85_RS08210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain E8M85_RS08210 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region E8M85_RS08225 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit E8M85_RS08230 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit E8M85_RS08235 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit E8M85_RS08240 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 E8M85_RS08245 PF00005 ABC transporter E8M85_RS08250 PF00005 ABC transporter E8M85_RS08250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region E8M85_RS08255 PF12911 N-terminal TM domain of oligopeptide transport permease C E8M85_RS08255 PF00528 Binding-protein-dependent transport system inner membrane component E8M85_RS08265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle E8M85_RS08270 PF01565 FAD binding domain E8M85_RS08270 PF02913 FAD linked oxidases, C-terminal domain E8M85_RS08275 PF00970 Oxidoreductase FAD-binding domain E8M85_RS08275 PF00042 Globin E8M85_RS08275 PF00175 Oxidoreductase NAD-binding domain E8M85_RS08280 PF00005 ABC transporter E8M85_RS08285 PF07690 Major Facilitator Superfamily E8M85_RS08290 PF00753 Metallo-beta-lactamase superfamily E8M85_RS08295 PF01176 Translation initiation factor 1A / IF-1 E8M85_RS08300 PF00444 Ribosomal protein L36 E8M85_RS08305 PF00416 Ribosomal protein S13/S18 E8M85_RS08310 PF00411 Ribosomal protein S11 E8M85_RS08315 PF01479 S4 domain E8M85_RS08315 PF00163 Ribosomal protein S4/S9 N-terminal domain E8M85_RS08320 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain E8M85_RS08320 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain E8M85_RS08320 PF01000 RNA polymerase Rpb3/RpoA insert domain E8M85_RS08325 PF01196 Ribosomal protein L17 E8M85_RS08330 PF08029 HisG, C-terminal domain E8M85_RS08330 PF01634 ATP phosphoribosyltransferase E8M85_RS08335 PF00815 Histidinol dehydrogenase E8M85_RS08340 PF00475 Imidazoleglycerol-phosphate dehydratase E8M85_RS08340 PF08645 Polynucleotide kinase 3 phosphatase E8M85_RS08345 PF00117 Glutamine amidotransferase class-I E8M85_RS08350 PF00977 Histidine biosynthesis protein E8M85_RS08360 PF00977 Histidine biosynthesis protein E8M85_RS08365 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase E8M85_RS08365 PF01502 Phosphoribosyl-AMP cyclohydrolase E8M85_RS08370 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle E8M85_RS08370 PF14602 Hexapeptide repeat of succinyl-transferase E8M85_RS08375 PF10609 NUBPL iron-transfer P-loop NTPase E8M85_RS08375 PF01883 Iron-sulfur cluster assembly protein E8M85_RS08380 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase E8M85_RS08380 PF02542 YgbB family E8M85_RS08390 PF01747 ATP-sulfurylase E8M85_RS08390 PF14306 PUA-like domain E8M85_RS08395 PF04608 Phosphatidylglycerophosphatase A E8M85_RS08400 PF01649 Ribosomal protein S20 E8M85_RS08405 PF03462 PCRF domain E8M85_RS08405 PF00472 RF-1 domain E8M85_RS08410 PF10615 Protein of unknown function (DUF2470) E8M85_RS08410 PF01243 Pyridoxamine 5'-phosphate oxidase E8M85_RS08415 PF00593 TonB dependent receptor E8M85_RS08415 PF07715 TonB-dependent Receptor Plug Domain E8M85_RS08420 PF01032 FecCD transport family E8M85_RS08425 PF00005 ABC transporter E8M85_RS08430 PF01497 Periplasmic binding protein E8M85_RS08440 PF00083 Sugar (and other) transporter E8M85_RS08445 PF00730 HhH-GPD superfamily base excision DNA repair protein E8M85_RS08445 PF14815 NUDIX domain E8M85_RS08475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region E8M85_RS08475 PF01872 RibD C-terminal domain E8M85_RS08485 PF03315 Serine dehydratase beta chain E8M85_RS08485 PF03313 Serine dehydratase alpha chain E8M85_RS08505 PF01618 MotA/TolQ/ExbB proton channel family E8M85_RS08510 PF02472 Biopolymer transport protein ExbD/TolR E8M85_RS08535 PF01264 Chorismate synthase E8M85_RS08540 PF14622 Ribonuclease-III-like E8M85_RS08540 PF00035 Double-stranded RNA binding motif E8M85_RS08545 PF00075 RNase H E8M85_RS08555 PF01807 CHC2 zinc finger E8M85_RS08555 PF08275 DNA primase catalytic core, N-terminal domain E8M85_RS08570 PF08245 Mur ligase middle domain E8M85_RS08570 PF02875 Mur ligase family, glutamate ligase domain E8M85_RS08575 PF02575 YbaB/EbfC DNA-binding family E8M85_RS08585 PF00348 Polyprenyl synthetase E8M85_RS08590 PF02779 Transketolase, pyrimidine binding domain E8M85_RS08590 PF02780 Transketolase, C-terminal domain E8M85_RS08590 PF00456 Transketolase, thiamine diphosphate binding domain E8M85_RS08595 PF02405 Permease MlaE E8M85_RS08600 PF00005 ABC transporter E8M85_RS08610 PF02470 MlaD protein E8M85_RS08610 PF03886 ABC-type transport auxiliary lipoprotein component E8M85_RS08620 PF00557 Metallopeptidase family M24 E8M85_RS08625 PF01177 Asp/Glu/Hydantoin racemase E8M85_RS08630 PF00877 NlpC/P60 family E8M85_RS08635 PF06965 Na+/H+ antiporter 1 E8M85_RS08640 PF06965 Na+/H+ antiporter 1 E8M85_RS08650 PF03239 Iron permease FTR1 family E8M85_RS08655 PF10634 Fe2+ transport protein E8M85_RS08675 PF00005 ABC transporter E8M85_RS08725 PF01068 ATP dependent DNA ligase domain E8M85_RS08725 PF14743 DNA ligase OB-like domain E8M85_RS08740 PF00113 Enolase, C-terminal TIM barrel domain E8M85_RS08740 PF03952 Enolase, N-terminal domain E8M85_RS08745 PF00154 recA bacterial DNA recombination protein E8M85_RS08750 PF02621 Menaquinone biosynthesis E8M85_RS08755 PF01313 Bacterial export proteins, family 3 E8M85_RS08760 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain E8M85_RS08785 PF00459 Inositol monophosphatase family E8M85_RS08790 PF00285 Citrate synthase, C-terminal domain E8M85_RS08800 PF06968 Biotin and Thiamin Synthesis associated domain E8M85_RS08800 PF04055 Radical SAM superfamily E8M85_RS08805 PF01396 Topoisomerase DNA binding C4 zinc finger E8M85_RS08805 PF01131 DNA topoisomerase E8M85_RS08805 PF01751 Toprim domain E8M85_RS08815 PF00344 SecY translocase E8M85_RS08820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A E8M85_RS08825 PF03719 Ribosomal protein S5, C-terminal domain E8M85_RS08825 PF00333 Ribosomal protein S5, N-terminal domain E8M85_RS08830 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast E8M85_RS08835 PF00347 Ribosomal protein L6 E8M85_RS08840 PF00410 Ribosomal protein S8 E8M85_RS08845 PF00253 Ribosomal protein S14p/S29e E8M85_RS08850 PF00281 Ribosomal protein L5 E8M85_RS08850 PF00673 ribosomal L5P family C-terminus E8M85_RS08855 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 E8M85_RS08855 PF00467 KOW motif E8M85_RS08860 PF00238 Ribosomal protein L14p/L23e E8M85_RS08865 PF00366 Ribosomal protein S17 E8M85_RS08870 PF00831 Ribosomal L29 protein E8M85_RS08875 PF00252 Ribosomal protein L16p/L10e E8M85_RS08880 PF00189 Ribosomal protein S3, C-terminal domain E8M85_RS08880 PF07650 KH domain E8M85_RS08885 PF00237 Ribosomal protein L22p/L17e E8M85_RS08890 PF00203 Ribosomal protein S19 E8M85_RS08895 PF00181 Ribosomal Proteins L2, RNA binding domain E8M85_RS08895 PF03947 Ribosomal Proteins L2, C-terminal domain E8M85_RS08900 PF00276 Ribosomal protein L23 E8M85_RS08905 PF00573 Ribosomal protein L4/L1 family E8M85_RS08910 PF00297 Ribosomal protein L3 E8M85_RS08915 PF00338 Ribosomal protein S10p/S20e E8M85_RS08920 PF00849 RNA pseudouridylate synthase E8M85_RS08920 PF01479 S4 domain E8M85_RS08925 PF17770 Ribonuclease J C-terminal domain E8M85_RS08925 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain E8M85_RS08925 PF00753 Metallo-beta-lactamase superfamily E8M85_RS08930 PF00398 Ribosomal RNA adenine dimethylase E8M85_RS08940 PF04055 Radical SAM superfamily E8M85_RS08975 PF00694 Aconitase C-terminal domain E8M85_RS08980 PF00330 Aconitase family (aconitate hydratase) E8M85_RS08985 PF00180 Isocitrate/isopropylmalate dehydrogenase E8M85_RS08990 PF00682 HMGL-like E8M85_RS08990 PF08502 LeuA allosteric (dimerisation) domain E8M85_RS09010 PF14489 QueF-like protein E8M85_RS09020 PF04204 Homoserine O-succinyltransferase E8M85_RS09025 PF01053 Cys/Met metabolism PLP-dependent enzyme E8M85_RS09030 PF07196 Flagellin hook IN motif E8M85_RS09030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal E8M85_RS09030 PF07559 Flagellar basal body protein FlaE E8M85_RS09030 PF00460 Flagella basal body rod protein E8M85_RS09035 PF02075 Crossover junction endodeoxyribonuclease RuvC