locus-tag class description CJ8421_RS00005 PF00308 Bacterial dnaA protein CJ8421_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CJ8421_RS00005 PF11638 DnaA N-terminal domain CJ8421_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CJ8421_RS00010 PF02767 DNA polymerase III beta subunit, central domain CJ8421_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CJ8421_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ8421_RS00015 PF01751 Toprim domain CJ8421_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CJ8421_RS00015 PF00204 DNA gyrase B CJ8421_RS00030 PF03553 Na+/H+ antiporter family CJ8421_RS00030 PF13726 Na+-H+ antiporter family CJ8421_RS00035 PF01493 GXGXG motif CJ8421_RS00035 PF00310 Glutamine amidotransferases class-II CJ8421_RS00035 PF01645 Conserved region in glutamate synthase CJ8421_RS00035 PF04898 Glutamate synthase central domain CJ8421_RS00045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJ8421_RS00045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ8421_RS00050 PF01351 Ribonuclease HII CJ8421_RS00060 PF02915 Rubrerythrin CJ8421_RS00065 PF00920 Dehydratase family CJ8421_RS00080 PF06508 Queuosine biosynthesis protein QueC CJ8421_RS00095 PF00672 HAMP domain CJ8421_RS00095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ8421_RS00095 PF12729 Four helix bundle sensory module for signal transduction CJ8421_RS00100 PF03150 Di-haem cytochrome c peroxidase CJ8421_RS00100 PF00034 Cytochrome c CJ8421_RS00105 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJ8421_RS00110 PF00849 RNA pseudouridylate synthase CJ8421_RS00115 PF10397 Adenylosuccinate lyase C-terminus CJ8421_RS00115 PF00206 Lyase CJ8421_RS00120 PF03477 ATP cone domain CJ8421_RS00120 PF02867 Ribonucleotide reductase, barrel domain CJ8421_RS00120 PF00317 Ribonucleotide reductase, all-alpha domain CJ8421_RS00125 PF00375 Sodium:dicarboxylate symporter family CJ8421_RS00130 PF02511 Thymidylate synthase complementing protein CJ8421_RS00135 PF06418 CTP synthase N-terminus CJ8421_RS00135 PF00117 Glutamine amidotransferase class-I CJ8421_RS00140 PF01368 DHH family CJ8421_RS00140 PF17768 RecJ OB domain CJ8421_RS00140 PF02272 DHHA1 domain CJ8421_RS00145 PF17763 Glutaminase/Asparaginase C-terminal domain CJ8421_RS00145 PF00710 Asparaginase, N-terminal CJ8421_RS00185 PF05175 Methyltransferase small domain CJ8421_RS00185 PF17827 PrmC N-terminal domain CJ8421_RS00215 PF07690 Major Facilitator Superfamily CJ8421_RS00235 PF00009 Elongation factor Tu GTP binding domain CJ8421_RS00235 PF03144 Elongation factor Tu domain 2 CJ8421_RS00235 PF00679 Elongation factor G C-terminus CJ8421_RS00250 PF03963 Flagellar hook capping protein - N-terminal region CJ8421_RS00255 PF00460 Flagella basal body rod protein CJ8421_RS00255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ8421_RS00255 PF07559 Flagellar basal body protein FlaE CJ8421_RS00285 PF00939 Sodium:sulfate symporter transmembrane region CJ8421_RS00320 PF04509 CheC-like family CJ8421_RS00320 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJ8421_RS00325 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJ8421_RS00325 PF02154 Flagellar motor switch protein FliM CJ8421_RS00330 PF04542 Sigma-70 region 2 CJ8421_RS00330 PF04539 Sigma-70 region 3 CJ8421_RS00330 PF04545 Sigma-70, region 4 CJ8421_RS00340 PF10609 NUBPL iron-transfer P-loop NTPase CJ8421_RS00345 PF00448 SRP54-type protein, GTPase domain CJ8421_RS00350 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CJ8421_RS00355 PF01220 Dehydroquinase class II CJ8421_RS00360 PF01979 Amidohydrolase family CJ8421_RS00365 PF01343 Peptidase family S49 CJ8421_RS00385 PF01814 Hemerythrin HHE cation binding domain CJ8421_RS00395 PF11870 Domain of unknown function (DUF3390) CJ8421_RS00395 PF02589 LUD domain CJ8421_RS00395 PF13183 4Fe-4S dicluster domain CJ8421_RS00400 PF02754 Cysteine-rich domain CJ8421_RS00405 PF02652 L-lactate permease CJ8421_RS00410 PF03498 Cytolethal distending toxin A/C domain CJ8421_RS00415 PF03372 Endonuclease/Exonuclease/phosphatase family CJ8421_RS00420 PF03498 Cytolethal distending toxin A/C domain CJ8421_RS00430 PF01654 Cytochrome bd terminal oxidase subunit I CJ8421_RS00435 PF02322 Cytochrome bd terminal oxidase subunit II CJ8421_RS00445 PF01177 Asp/Glu/Hydantoin racemase CJ8421_RS00450 PF03167 Uracil DNA glycosylase superfamily CJ8421_RS00455 PF00206 Lyase CJ8421_RS00455 PF10415 Fumarase C C-terminus CJ8421_RS00460 PF03605 Anaerobic c4-dicarboxylate membrane transporter CJ8421_RS00490 PF00829 Ribosomal prokaryotic L21 protein CJ8421_RS00495 PF01016 Ribosomal L27 protein CJ8421_RS00500 PF01926 50S ribosome-binding GTPase CJ8421_RS00500 PF01018 GTP1/OBG CJ8421_RS00505 PF00696 Amino acid kinase family CJ8421_RS00510 PF02911 Formyl transferase, C-terminal domain CJ8421_RS00510 PF00551 Formyl transferase CJ8421_RS00515 PF02237 Biotin protein ligase C terminal domain CJ8421_RS00515 PF08279 HTH domain CJ8421_RS00515 PF03099 Biotin/lipoate A/B protein ligase family CJ8421_RS00520 PF13614 AAA domain CJ8421_RS00525 PF02195 ParB-like nuclease domain CJ8421_RS00525 PF17762 HTH domain found in ParB protein CJ8421_RS00535 PF00430 ATP synthase B/B' CF(0) CJ8421_RS00540 PF00213 ATP synthase delta (OSCP) subunit CJ8421_RS00545 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJ8421_RS00545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ8421_RS00545 PF00306 ATP synthase alpha/beta chain, C terminal domain CJ8421_RS00550 PF00231 ATP synthase CJ8421_RS00555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ8421_RS00555 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJ8421_RS00560 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJ8421_RS00565 PF01618 MotA/TolQ/ExbB proton channel family CJ8421_RS00570 PF02472 Biopolymer transport protein ExbD/TolR CJ8421_RS00585 PF00223 Photosystem I psaA/psaB protein CJ8421_RS00585 PF00691 OmpA family CJ8421_RS00595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJ8421_RS00600 PF00698 Acyl transferase domain CJ8421_RS00605 PF01048 Phosphorylase superfamily CJ8421_RS00610 PF01171 PP-loop family CJ8421_RS00625 PF02130 Uncharacterized protein family UPF0054 CJ8421_RS00635 PF01207 Dihydrouridine synthase (Dus) CJ8421_RS00645 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJ8421_RS00650 PF02590 Predicted SPOUT methyltransferase CJ8421_RS00655 PF01039 Carboxyl transferase domain CJ8421_RS00655 PF17848 Acetyl-coA carboxylase zinc finger domain CJ8421_RS00660 PF00459 Inositol monophosphatase family CJ8421_RS00665 PF01103 Surface antigen CJ8421_RS00665 PF07244 Surface antigen variable number repeat CJ8421_RS00680 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CJ8421_RS00690 PF00288 GHMP kinases N terminal domain CJ8421_RS00700 PF11987 Translation-initiation factor 2 CJ8421_RS00700 PF00009 Elongation factor Tu GTP binding domain CJ8421_RS00700 PF04760 Translation initiation factor IF-2, N-terminal region CJ8421_RS00705 PF02033 Ribosome-binding factor A CJ8421_RS00710 PF02576 RimP N-terminal domain CJ8421_RS00710 PF17384 RimP C-terminal SH3 domain CJ8421_RS00715 PF07728 AAA domain (dynein-related subfamily) CJ8421_RS00715 PF12102 Domain of unknown function (DUF3578) CJ8421_RS00725 PF00950 ABC 3 transport family CJ8421_RS00730 PF00005 ABC transporter CJ8421_RS00740 PF02743 Cache domain CJ8421_RS00740 PF00672 HAMP domain CJ8421_RS00740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ8421_RS00750 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ8421_RS00755 PF00085 Thioredoxin CJ8421_RS00760 PF02021 Uncharacterised protein family UPF0102 CJ8421_RS00765 PF01842 ACT domain CJ8421_RS00765 PF00742 Homoserine dehydrogenase CJ8421_RS00765 PF03447 Homoserine dehydrogenase, NAD binding domain CJ8421_RS00770 PF00155 Aminotransferase class I and II CJ8421_RS00785 PF00588 SpoU rRNA Methylase family CJ8421_RS00785 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJ8421_RS00790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ8421_RS00795 PF01197 Ribosomal protein L31 CJ8421_RS00800 PF04452 RNA methyltransferase CJ8421_RS00825 PF06463 Molybdenum Cofactor Synthesis C CJ8421_RS00825 PF04055 Radical SAM superfamily CJ8421_RS00850 PF02659 Putative manganese efflux pump CJ8421_RS00865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJ8421_RS00865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJ8421_RS00880 PF03435 Saccharopine dehydrogenase NADP binding domain CJ8421_RS00880 PF16653 Saccharopine dehydrogenase C-terminal domain CJ8421_RS00885 PF08402 TOBE domain CJ8421_RS00885 PF00005 ABC transporter CJ8421_RS00895 PF13416 Bacterial extracellular solute-binding protein CJ8421_RS00915 PF01618 MotA/TolQ/ExbB proton channel family CJ8421_RS00920 PF02472 Biopolymer transport protein ExbD/TolR CJ8421_RS00930 PF05992 SbmA/BacA-like family CJ8421_RS00935 PF01595 Cyclin M transmembrane N-terminal domain CJ8421_RS00935 PF03471 Transporter associated domain CJ8421_RS00935 PF00571 CBS domain CJ8421_RS00945 PF08274 PhnA Zinc-Ribbon CJ8421_RS00945 PF03831 PhnA domain CJ8421_RS00950 PF03741 Integral membrane protein TerC family CJ8421_RS00955 PF00551 Formyl transferase CJ8421_RS00960 PF01256 Carbohydrate kinase CJ8421_RS00960 PF03853 YjeF-related protein N-terminus CJ8421_RS00970 PF01078 Magnesium chelatase, subunit ChlI CJ8421_RS00970 PF13335 Magnesium chelatase, subunit ChlI C-terminal CJ8421_RS00975 PF01327 Polypeptide deformylase CJ8421_RS00980 PF00574 Clp protease CJ8421_RS00985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJ8421_RS00985 PF05698 Bacterial trigger factor protein (TF) C-terminus CJ8421_RS00985 PF05697 Bacterial trigger factor protein (TF) CJ8421_RS00990 PF01227 GTP cyclohydrolase I CJ8421_RS00995 PF18269 T3SS EscN ATPase C-terminal domain CJ8421_RS00995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ8421_RS01000 PF00156 Phosphoribosyl transferase domain CJ8421_RS01005 PF05173 Dihydrodipicolinate reductase, C-terminus CJ8421_RS01005 PF01113 Dihydrodipicolinate reductase, N-terminus CJ8421_RS01010 PF12002 MgsA AAA+ ATPase C terminal CJ8421_RS01010 PF01661 Macro domain CJ8421_RS01010 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJ8421_RS01010 PF16193 AAA C-terminal domain CJ8421_RS01035 PF03600 Citrate transporter CJ8421_RS01040 PF03169 OPT oligopeptide transporter protein CJ8421_RS01045 PF02673 Bacitracin resistance protein BacA CJ8421_RS01050 PF03129 Anticodon binding domain CJ8421_RS01050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ8421_RS01050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ8421_RS01055 PF00707 Translation initiation factor IF-3, C-terminal domain CJ8421_RS01055 PF05198 Translation initiation factor IF-3, N-terminal domain CJ8421_RS01090 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJ8421_RS01090 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ8421_RS01100 PF00696 Amino acid kinase family CJ8421_RS01105 PF00202 Aminotransferase class-III CJ8421_RS01115 PF00132 Bacterial transferase hexapeptide (six repeats) CJ8421_RS01120 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CJ8421_RS01120 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CJ8421_RS01125 PF00268 Ribonucleotide reductase, small chain CJ8421_RS01135 PF00156 Phosphoribosyl transferase domain CJ8421_RS01140 PF01765 Ribosome recycling factor CJ8421_RS01145 PF03840 Preprotein translocase SecG subunit CJ8421_RS01150 PF01027 Inhibitor of apoptosis-promoting Bax1 CJ8421_RS01155 PF00484 Carbonic anhydrase CJ8421_RS01160 PF00924 Mechanosensitive ion channel CJ8421_RS01165 PF01592 NifU-like N terminal domain CJ8421_RS01165 PF01106 NifU-like domain CJ8421_RS01165 PF04324 BFD-like [2Fe-2S] binding domain CJ8421_RS01170 PF00266 Aminotransferase class-V CJ8421_RS01175 PF01814 Hemerythrin HHE cation binding domain CJ8421_RS01185 PF01632 Ribosomal protein L35 CJ8421_RS01190 PF00453 Ribosomal protein L20 CJ8421_RS01215 PF00083 Sugar (and other) transporter CJ8421_RS01225 PF01967 MoaC family CJ8421_RS01230 PF04359 Protein of unknown function (DUF493) CJ8421_RS01240 PF03372 Endonuclease/Exonuclease/phosphatase family CJ8421_RS01245 PF00884 Sulfatase CJ8421_RS01245 PF08019 Phosphoethanolamine transferase EptA/EptB CJ8421_RS01250 PF01219 Prokaryotic diacylglycerol kinase CJ8421_RS01260 PF04909 Amidohydrolase CJ8421_RS01270 PF01209 ubiE/COQ5 methyltransferase family CJ8421_RS01275 PF17200 Single Cache domain 2 CJ8421_RS01275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ8421_RS01275 PF00672 HAMP domain CJ8421_RS01285 PF02535 ZIP Zinc transporter CJ8421_RS01305 PF01145 SPFH domain / Band 7 family CJ8421_RS01310 PF01063 Amino-transferase class IV CJ8421_RS01315 PF01361 Tautomerase enzyme CJ8421_RS01320 PF00578 AhpC/TSA family CJ8421_RS01325 PF02677 Epoxyqueuosine reductase QueH CJ8421_RS01330 PF07977 FabA-like domain CJ8421_RS01335 PF00132 Bacterial transferase hexapeptide (six repeats) CJ8421_RS01335 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CJ8421_RS01340 PF06689 ClpX C4-type zinc finger CJ8421_RS01340 PF10431 C-terminal, D2-small domain, of ClpB protein CJ8421_RS01340 PF07724 AAA domain (Cdc48 subfamily) CJ8421_RS01355 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJ8421_RS01355 PF02142 MGS-like domain CJ8421_RS01355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJ8421_RS01365 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJ8421_RS01375 PF01584 CheW-like domain CJ8421_RS01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ8421_RS01380 PF02895 Signal transducing histidine kinase, homodimeric domain CJ8421_RS01380 PF01584 CheW-like domain CJ8421_RS01380 PF00072 Response regulator receiver domain CJ8421_RS01380 PF01627 Hpt domain CJ8421_RS01385 PF01584 CheW-like domain CJ8421_RS01385 PF00072 Response regulator receiver domain CJ8421_RS01395 PF01272 Transcription elongation factor, GreA/GreB, C-term CJ8421_RS01395 PF03449 Transcription elongation factor, N-terminal CJ8421_RS01400 PF02684 Lipid-A-disaccharide synthetase CJ8421_RS01410 PF07690 Major Facilitator Superfamily CJ8421_RS01415 PF07690 Major Facilitator Superfamily CJ8421_RS01420 PF07690 Major Facilitator Superfamily CJ8421_RS01425 PF01975 Survival protein SurE CJ8421_RS01435 PF13673 Acetyltransferase (GNAT) domain CJ8421_RS01440 PF02261 Aspartate decarboxylase CJ8421_RS01445 PF02569 Pantoate-beta-alanine ligase CJ8421_RS01450 PF02548 Ketopantoate hydroxymethyltransferase CJ8421_RS01455 PF03459 TOBE domain CJ8421_RS01455 PF00005 ABC transporter CJ8421_RS01460 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS01480 PF04301 Protein of unknown function (DUF452) CJ8421_RS01480 PF08241 Methyltransferase domain CJ8421_RS01485 PF00155 Aminotransferase class I and II CJ8421_RS01490 PF00202 Aminotransferase class-III CJ8421_RS01500 PF00893 Small Multidrug Resistance protein CJ8421_RS01510 PF14693 Ribosomal protein TL5, C-terminal domain CJ8421_RS01510 PF01386 Ribosomal L25p family CJ8421_RS01515 PF01195 Peptidyl-tRNA hydrolase CJ8421_RS01525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJ8421_RS01525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJ8421_RS01535 PF00800 Prephenate dehydratase CJ8421_RS01535 PF01817 Chorismate mutase type II CJ8421_RS01535 PF01842 ACT domain CJ8421_RS01540 PF00155 Aminotransferase class I and II CJ8421_RS01545 PF08345 Flagellar M-ring protein C-terminal CJ8421_RS01545 PF01514 Secretory protein of YscJ/FliF family CJ8421_RS01550 PF01706 FliG C-terminal domain CJ8421_RS01550 PF14841 FliG middle domain CJ8421_RS01550 PF14842 FliG N-terminal domain CJ8421_RS01560 PF02779 Transketolase, pyrimidine binding domain CJ8421_RS01560 PF02780 Transketolase, C-terminal domain CJ8421_RS01560 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJ8421_RS01575 PF01209 ubiE/COQ5 methyltransferase family CJ8421_RS01580 PF13742 OB-fold nucleic acid binding domain CJ8421_RS01580 PF02601 Exonuclease VII, large subunit CJ8421_RS01585 PF00266 Aminotransferase class-V CJ8421_RS01590 PF01042 Endoribonuclease L-PSP CJ8421_RS01595 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJ8421_RS01595 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJ8421_RS01600 PF02504 Fatty acid synthesis protein CJ8421_RS01605 PF01783 Ribosomal L32p protein family CJ8421_RS01615 PF00334 Nucleoside diphosphate kinase CJ8421_RS01620 PF00037 4Fe-4S binding domain CJ8421_RS01625 PF00578 AhpC/TSA family CJ8421_RS01625 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJ8421_RS01630 PF01312 FlhB HrpN YscU SpaS Family CJ8421_RS01635 PF13677 Membrane MotB of proton-channel complex MotA/MotB CJ8421_RS01635 PF00691 OmpA family CJ8421_RS01640 PF01618 MotA/TolQ/ExbB proton channel family CJ8421_RS01645 PF01367 5'-3' exonuclease, C-terminal SAM fold CJ8421_RS01645 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJ8421_RS01645 PF01612 3'-5' exonuclease CJ8421_RS01645 PF00476 DNA polymerase family A CJ8421_RS01655 PF01156 Inosine-uridine preferring nucleoside hydrolase CJ8421_RS01660 PF09335 SNARE associated Golgi protein CJ8421_RS01680 PF17755 UvrA DNA-binding domain CJ8421_RS01680 PF00005 ABC transporter CJ8421_RS01680 PF17760 UvrA interaction domain CJ8421_RS01685 PF01925 Sulfite exporter TauE/SafE CJ8421_RS01695 PF04715 Anthranilate synthase component I, N terminal region CJ8421_RS01695 PF00425 chorismate binding enzyme CJ8421_RS01700 PF00591 Glycosyl transferase family, a/b domain CJ8421_RS01700 PF00117 Glutamine amidotransferase class-I CJ8421_RS01700 PF02885 Glycosyl transferase family, helical bundle domain CJ8421_RS01705 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJ8421_RS01710 PF00291 Pyridoxal-phosphate dependent enzyme CJ8421_RS01715 PF00290 Tryptophan synthase alpha chain CJ8421_RS01725 PF04509 CheC-like family CJ8421_RS01725 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJ8421_RS01740 PF00037 4Fe-4S binding domain CJ8421_RS01745 PF00072 Response regulator receiver domain CJ8421_RS01745 PF00486 Transcriptional regulatory protein, C terminal CJ8421_RS01755 PF02660 Glycerol-3-phosphate acyltransferase CJ8421_RS01760 PF00034 Cytochrome c CJ8421_RS01760 PF03150 Di-haem cytochrome c peroxidase CJ8421_RS01765 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJ8421_RS01765 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJ8421_RS01765 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJ8421_RS01770 PF01252 Signal peptidase (SPase) II CJ8421_RS01775 PF03653 Uncharacterised protein family (UPF0093) CJ8421_RS01780 PF04055 Radical SAM superfamily CJ8421_RS01780 PF06969 HemN C-terminal domain CJ8421_RS01790 PF02321 Outer membrane efflux protein CJ8421_RS01795 PF00873 AcrB/AcrD/AcrF family CJ8421_RS01800 PF13533 Biotin-lipoyl like CJ8421_RS01815 PF01165 Ribosomal protein S21 CJ8421_RS01825 PF03738 Glutathionylspermidine synthase preATP-grasp CJ8421_RS01830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ8421_RS01830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ8421_RS01835 PF04461 Protein of unknown function (DUF520) CJ8421_RS01850 PF17862 AAA+ lid domain CJ8421_RS01850 PF00004 ATPase family associated with various cellular activities (AAA) CJ8421_RS01850 PF06480 FtsH Extracellular CJ8421_RS01850 PF01434 Peptidase family M41 CJ8421_RS01855 PF01794 Ferric reductase like transmembrane component CJ8421_RS01860 PF00174 Oxidoreductase molybdopterin binding domain CJ8421_RS01870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJ8421_RS01875 PF01029 NusB family CJ8421_RS01880 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJ8421_RS01885 PF00793 DAHP synthetase I family CJ8421_RS01895 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJ8421_RS01895 PF01926 50S ribosome-binding GTPase CJ8421_RS01900 PF01202 Shikimate kinase CJ8421_RS01905 PF00579 tRNA synthetases class I (W and Y) CJ8421_RS01910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ8421_RS01910 PF02403 Seryl-tRNA synthetase N-terminal domain CJ8421_RS01925 PF00391 PEP-utilising enzyme, mobile domain CJ8421_RS01925 PF02887 Pyruvate kinase, alpha/beta domain CJ8421_RS01925 PF00224 Pyruvate kinase, barrel domain CJ8421_RS01930 PF06039 Malate:quinone oxidoreductase (Mqo) CJ8421_RS01935 PF03309 Type III pantothenate kinase CJ8421_RS01945 PF15437 Plasminogen-binding protein pgbA C-terminal CJ8421_RS01955 PF02686 Glu-tRNAGln amidotransferase C subunit CJ8421_RS01965 PF01475 Ferric uptake regulator family CJ8421_RS01970 PF01336 OB-fold nucleic acid binding domain CJ8421_RS01970 PF00152 tRNA synthetases class II (D, K and N) CJ8421_RS01975 PF00464 Serine hydroxymethyltransferase CJ8421_RS01990 PF08501 Shikimate dehydrogenase substrate binding domain CJ8421_RS02000 PF01790 Prolipoprotein diacylglyceryl transferase CJ8421_RS02005 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJ8421_RS02010 PF00890 FAD binding domain CJ8421_RS02010 PF02910 Fumarate reductase flavoprotein C-term CJ8421_RS02015 PF13183 4Fe-4S dicluster domain CJ8421_RS02015 PF13085 2Fe-2S iron-sulfur cluster binding domain CJ8421_RS02020 PF01926 50S ribosome-binding GTPase CJ8421_RS02020 PF10396 GTP-binding protein TrmE N-terminus CJ8421_RS02020 PF12631 MnmE helical domain CJ8421_RS02040 PF00732 GMC oxidoreductase CJ8421_RS02040 PF05199 GMC oxidoreductase CJ8421_RS02060 PF04264 YceI-like domain CJ8421_RS02090 PF12848 ABC transporter CJ8421_RS02090 PF00005 ABC transporter CJ8421_RS02105 PF01205 Uncharacterized protein family UPF0029 CJ8421_RS02105 PF09186 Domain of unknown function (DUF1949) CJ8421_RS02145 PF08245 Mur ligase middle domain CJ8421_RS02150 PF00953 Glycosyl transferase family 4 CJ8421_RS02155 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CJ8421_RS02155 PF01676 Metalloenzyme superfamily CJ8421_RS02175 PF02910 Fumarate reductase flavoprotein C-term CJ8421_RS02175 PF00890 FAD binding domain CJ8421_RS02180 PF13085 2Fe-2S iron-sulfur cluster binding domain CJ8421_RS02180 PF13183 4Fe-4S dicluster domain CJ8421_RS02185 PF02754 Cysteine-rich domain CJ8421_RS02190 PF03070 TENA/THI-4/PQQC family CJ8421_RS02195 PF00550 Phosphopantetheine attachment site CJ8421_RS02200 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ8421_RS02200 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ8421_RS02205 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJ8421_RS02215 PF00293 NUDIX domain CJ8421_RS02220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ8421_RS02220 PF08447 PAS fold CJ8421_RS02220 PF13426 PAS domain CJ8421_RS02230 PF00830 Ribosomal L28 family CJ8421_RS02235 PF00834 Ribulose-phosphate 3 epimerase family CJ8421_RS02240 PF00929 Exonuclease CJ8421_RS02240 PF02811 PHP domain CJ8421_RS02240 PF14579 Helix-hairpin-helix motif CJ8421_RS02240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJ8421_RS02240 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJ8421_RS02240 PF14480 DNA polymerase III polC-type N-terminus I CJ8421_RS02240 PF11490 DNA polymerase III polC-type N-terminus II CJ8421_RS02245 PF01964 Radical SAM ThiC family CJ8421_RS02265 PF04028 Domain of unknown function (DUF374) CJ8421_RS02270 PF04055 Radical SAM superfamily CJ8421_RS02270 PF01938 TRAM domain CJ8421_RS02270 PF00919 Uncharacterized protein family UPF0004 CJ8421_RS02280 PF13184 NusA-like KH domain CJ8421_RS02280 PF08529 NusA N-terminal domain CJ8421_RS02290 PF04055 Radical SAM superfamily CJ8421_RS02295 PF05193 Peptidase M16 inactive domain CJ8421_RS02300 PF04851 Type III restriction enzyme, res subunit CJ8421_RS02300 PF00271 Helicase conserved C-terminal domain CJ8421_RS02305 PF01152 Bacterial-like globin CJ8421_RS02315 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS02320 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS02325 PF00005 ABC transporter CJ8421_RS02350 PF00009 Elongation factor Tu GTP binding domain CJ8421_RS02350 PF03144 Elongation factor Tu domain 2 CJ8421_RS02350 PF03143 Elongation factor Tu C-terminal domain CJ8421_RS02355 PF00471 Ribosomal protein L33 CJ8421_RS02370 PF02357 Transcription termination factor nusG CJ8421_RS02375 PF00298 Ribosomal protein L11, RNA binding domain CJ8421_RS02375 PF03946 Ribosomal protein L11, N-terminal domain CJ8421_RS02380 PF00687 Ribosomal protein L1p/L10e family CJ8421_RS02385 PF00466 Ribosomal protein L10 CJ8421_RS02390 PF00542 Ribosomal protein L7/L12 C-terminal domain CJ8421_RS02390 PF16320 Ribosomal protein L7/L12 dimerisation domain CJ8421_RS02395 PF10385 RNA polymerase beta subunit external 1 domain CJ8421_RS02395 PF04561 RNA polymerase Rpb2, domain 2 CJ8421_RS02395 PF04565 RNA polymerase Rpb2, domain 3 CJ8421_RS02395 PF04560 RNA polymerase Rpb2, domain 7 CJ8421_RS02395 PF00562 RNA polymerase Rpb2, domain 6 CJ8421_RS02395 PF04563 RNA polymerase beta subunit CJ8421_RS02400 PF04998 RNA polymerase Rpb1, domain 5 CJ8421_RS02400 PF04983 RNA polymerase Rpb1, domain 3 CJ8421_RS02400 PF00623 RNA polymerase Rpb1, domain 2 CJ8421_RS02400 PF04997 RNA polymerase Rpb1, domain 1 CJ8421_RS02400 PF05000 RNA polymerase Rpb1, domain 4 CJ8421_RS02405 PF00164 Ribosomal protein S12/S23 CJ8421_RS02410 PF00177 Ribosomal protein S7p/S5e CJ8421_RS02415 PF00679 Elongation factor G C-terminus CJ8421_RS02415 PF14492 Elongation Factor G, domain II CJ8421_RS02415 PF03764 Elongation factor G, domain IV CJ8421_RS02415 PF03144 Elongation factor Tu domain 2 CJ8421_RS02415 PF00009 Elongation factor Tu GTP binding domain CJ8421_RS02445 PF00218 Indole-3-glycerol phosphate synthase CJ8421_RS02470 PF00762 Ferrochelatase CJ8421_RS02475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ8421_RS02475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ8421_RS02480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ8421_RS02485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ8421_RS02485 PF02272 DHHA1 domain CJ8421_RS02485 PF01411 tRNA synthetases class II (A) CJ8421_RS02490 PF02545 Maf-like protein CJ8421_RS02495 PF17092 Penicillin-binding protein OB-like domain CJ8421_RS02495 PF00905 Penicillin binding protein transpeptidase domain CJ8421_RS02495 PF00912 Transglycosylase CJ8421_RS02500 PF10431 C-terminal, D2-small domain, of ClpB protein CJ8421_RS02500 PF02861 Clp amino terminal domain, pathogenicity island component CJ8421_RS02500 PF17871 AAA lid domain CJ8421_RS02500 PF07724 AAA domain (Cdc48 subfamily) CJ8421_RS02500 PF00004 ATPase family associated with various cellular activities (AAA) CJ8421_RS02505 PF02583 Metal-sensitive transcriptional repressor CJ8421_RS02510 PF03572 Peptidase family S41 CJ8421_RS02510 PF13180 PDZ domain CJ8421_RS02515 PF01259 SAICAR synthetase CJ8421_RS02520 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CJ8421_RS02535 PF01553 Acyltransferase CJ8421_RS02540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJ8421_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ8421_RS02545 PF00183 Hsp90 protein CJ8421_RS02550 PF00581 Rhodanese-like domain CJ8421_RS02570 PF02049 Flagellar hook-basal body complex protein FliE CJ8421_RS02575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ8421_RS02575 PF00460 Flagella basal body rod protein CJ8421_RS02580 PF00460 Flagella basal body rod protein CJ8421_RS02595 PF03971 Monomeric isocitrate dehydrogenase CJ8421_RS02600 PF00056 lactate/malate dehydrogenase, NAD binding domain CJ8421_RS02600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJ8421_RS02605 PF00549 CoA-ligase CJ8421_RS02605 PF08442 ATP-grasp domain CJ8421_RS02610 PF02629 CoA binding domain CJ8421_RS02610 PF00549 CoA-ligase CJ8421_RS02620 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CJ8421_RS02620 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CJ8421_RS02620 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CJ8421_RS02625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ8421_RS02645 PF00348 Polyprenyl synthetase CJ8421_RS02650 PF01488 Shikimate / quinate 5-dehydrogenase CJ8421_RS02650 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CJ8421_RS02650 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CJ8421_RS02655 PF03129 Anticodon binding domain CJ8421_RS02655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ8421_RS02655 PF04073 Aminoacyl-tRNA editing domain CJ8421_RS02665 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CJ8421_RS02665 PF03900 Porphobilinogen deaminase, C-terminal domain CJ8421_RS02670 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CJ8421_RS02680 PF07195 Flagellar hook-associated protein 2 C-terminus CJ8421_RS02680 PF02465 Flagellar hook-associated protein 2 N-terminus CJ8421_RS02680 PF07196 Flagellin hook IN motif CJ8421_RS02685 PF02561 Flagellar protein FliS CJ8421_RS02695 PF09285 Elongation factor P, C-terminal CJ8421_RS02695 PF08207 Elongation factor P (EF-P) KOW-like domain CJ8421_RS02695 PF01132 Elongation factor P (EF-P) OB domain CJ8421_RS02730 PF00171 Aldehyde dehydrogenase family CJ8421_RS02735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ8421_RS02750 PF03796 DnaB-like helicase C terminal domain CJ8421_RS02750 PF00772 DnaB-like helicase N terminal domain CJ8421_RS02795 PF00925 GTP cyclohydrolase II CJ8421_RS02795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJ8421_RS02800 PF09424 Yqey-like protein CJ8421_RS02805 PF00205 Thiamine pyrophosphate enzyme, central domain CJ8421_RS02805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ8421_RS02805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ8421_RS02810 PF10369 Small subunit of acetolactate synthase CJ8421_RS02815 PF00132 Bacterial transferase hexapeptide (six repeats) CJ8421_RS02815 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CJ8421_RS02820 PF02547 Queuosine biosynthesis protein CJ8421_RS02825 PF00902 Sec-independent protein translocase protein (TatC) CJ8421_RS02830 PF02416 mttA/Hcf106 family CJ8421_RS02835 PF06969 HemN C-terminal domain CJ8421_RS02835 PF04055 Radical SAM superfamily CJ8421_RS02840 PF00293 NUDIX domain CJ8421_RS02845 PF01842 ACT domain CJ8421_RS02845 PF13840 ACT domain CJ8421_RS02845 PF00696 Amino acid kinase family CJ8421_RS02860 PF00809 Pterin binding enzyme CJ8421_RS02865 PF00533 BRCA1 C Terminus (BRCT) domain CJ8421_RS02865 PF01653 NAD-dependent DNA ligase adenylation domain CJ8421_RS02865 PF03120 NAD-dependent DNA ligase OB-fold domain CJ8421_RS02880 PF01687 Riboflavin kinase CJ8421_RS02880 PF06574 FAD synthetase CJ8421_RS02885 PF13847 Methyltransferase domain CJ8421_RS02900 PF03458 UPF0126 domain CJ8421_RS02910 PF10576 Iron-sulfur binding domain of endonuclease III CJ8421_RS02910 PF00633 Helix-hairpin-helix motif CJ8421_RS02910 PF00730 HhH-GPD superfamily base excision DNA repair protein CJ8421_RS02920 PF01116 Fructose-bisphosphate aldolase class-II CJ8421_RS02940 PF00209 Sodium:neurotransmitter symporter family CJ8421_RS02945 PF03473 MOSC domain CJ8421_RS02945 PF03475 3-alpha domain CJ8421_RS02950 PF11412 Disulphide bond corrector protein DsbC CJ8421_RS02950 PF02683 Cytochrome C biogenesis protein transmembrane region CJ8421_RS02950 PF00085 Thioredoxin CJ8421_RS02955 PF03976 Polyphosphate kinase 2 (PPK2) CJ8421_RS02960 PF07687 Peptidase dimerisation domain CJ8421_RS02960 PF01546 Peptidase family M20/M25/M40 CJ8421_RS02965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ8421_RS02970 PF12704 MacB-like periplasmic core domain CJ8421_RS02970 PF00005 ABC transporter CJ8421_RS02970 PF02687 FtsX-like permease family CJ8421_RS02975 PF02321 Outer membrane efflux protein CJ8421_RS02990 PF03062 MBOAT, membrane-bound O-acyltransferase family CJ8421_RS02995 PF00210 Ferritin-like domain CJ8421_RS03000 PF12849 PBP superfamily domain CJ8421_RS03005 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS03010 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS03015 PF00005 ABC transporter CJ8421_RS03025 PF01554 MatE CJ8421_RS03040 PF01300 Telomere recombination CJ8421_RS03040 PF00708 Acylphosphatase CJ8421_RS03040 PF07503 HypF finger CJ8421_RS03040 PF17788 HypF Kae1-like domain CJ8421_RS03045 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJ8421_RS03050 PF01455 HupF/HypC family CJ8421_RS03055 PF01924 Hydrogenase formation hypA family CJ8421_RS03060 PF00586 AIR synthase related protein, N-terminal domain CJ8421_RS03060 PF02769 AIR synthase related protein, C-terminal domain CJ8421_RS03065 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CJ8421_RS03070 PF01555 DNA methylase CJ8421_RS03075 PF04851 Type III restriction enzyme, res subunit CJ8421_RS03085 PF00773 RNB domain CJ8421_RS03090 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJ8421_RS03090 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJ8421_RS03100 PF02481 DNA recombination-mediator protein A CJ8421_RS03100 PF17782 DprA winged helix domain CJ8421_RS03105 PF03652 Holliday junction resolvase CJ8421_RS03110 PF01189 16S rRNA methyltransferase RsmB/F CJ8421_RS03110 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CJ8421_RS03110 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CJ8421_RS03115 PF01625 Peptide methionine sulfoxide reductase CJ8421_RS03120 PF00719 Inorganic pyrophosphatase CJ8421_RS03130 PF02938 GAD domain CJ8421_RS03130 PF01336 OB-fold nucleic acid binding domain CJ8421_RS03130 PF00152 tRNA synthetases class II (D, K and N) CJ8421_RS03135 PF01513 ATP-NAD kinase CJ8421_RS03140 PF13476 AAA domain CJ8421_RS03145 PF00072 Response regulator receiver domain CJ8421_RS03145 PF00990 Diguanylate cyclase, GGDEF domain CJ8421_RS03150 PF01026 TatD related DNase CJ8421_RS03155 PF00877 NlpC/P60 family CJ8421_RS03155 PF01476 LysM domain CJ8421_RS03160 PF05036 Sporulation related domain CJ8421_RS03160 PF03330 Lytic transglycolase CJ8421_RS03180 PF01926 50S ribosome-binding GTPase CJ8421_RS03190 PF00905 Penicillin binding protein transpeptidase domain CJ8421_RS03190 PF03717 Penicillin-binding Protein dimerisation domain CJ8421_RS03195 PF01321 Creatinase/Prolidase N-terminal domain CJ8421_RS03195 PF00557 Metallopeptidase family M24 CJ8421_RS03200 PF00854 POT family CJ8421_RS03205 PF00854 POT family CJ8421_RS03210 PF00854 POT family CJ8421_RS03220 PF00854 POT family CJ8421_RS03235 PF07650 KH domain CJ8421_RS03235 PF01926 50S ribosome-binding GTPase CJ8421_RS03240 PF10431 C-terminal, D2-small domain, of ClpB protein CJ8421_RS03240 PF07724 AAA domain (Cdc48 subfamily) CJ8421_RS03245 PF00227 Proteasome subunit CJ8421_RS03250 PF03948 Ribosomal protein L9, C-terminal domain CJ8421_RS03250 PF01281 Ribosomal protein L9, N-terminal domain CJ8421_RS03255 PF00764 Arginosuccinate synthase CJ8421_RS03260 PF01479 S4 domain CJ8421_RS03265 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJ8421_RS03270 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJ8421_RS03270 PF00005 ABC transporter CJ8421_RS03275 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJ8421_RS03275 PF04552 Sigma-54, DNA binding domain CJ8421_RS03275 PF04963 Sigma-54 factor, core binding domain CJ8421_RS03280 PF03605 Anaerobic c4-dicarboxylate membrane transporter CJ8421_RS03295 PF03814 Potassium-transporting ATPase A subunit CJ8421_RS03300 PF03814 Potassium-transporting ATPase A subunit CJ8421_RS03310 PF02669 K+-transporting ATPase, c chain CJ8421_RS03325 PF00271 Helicase conserved C-terminal domain CJ8421_RS03325 PF02151 UvrB/uvrC motif CJ8421_RS03325 PF12344 Ultra-violet resistance protein B CJ8421_RS03325 PF17757 UvrB interaction domain CJ8421_RS03325 PF04851 Type III restriction enzyme, res subunit CJ8421_RS03345 PF00270 DEAD/DEAH box helicase CJ8421_RS03345 PF00271 Helicase conserved C-terminal domain CJ8421_RS03345 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJ8421_RS03345 PF18074 Primosomal protein N C-terminal domain CJ8421_RS03345 PF17764 3′ DNA-binding domain (3′BD) CJ8421_RS03355 PF04551 GcpE protein CJ8421_RS03360 PF02107 Flagellar L-ring protein CJ8421_RS03365 PF01515 Phosphate acetyl/butaryl transferase CJ8421_RS03370 PF00871 Acetokinase family CJ8421_RS03390 PF01795 MraW methylase family CJ8421_RS03395 PF13145 PPIC-type PPIASE domain CJ8421_RS03400 PF02491 SHS2 domain inserted in FTSA CJ8421_RS03405 PF00091 Tubulin/FtsZ family, GTPase domain CJ8421_RS03405 PF12327 FtsZ family, C-terminal domain CJ8421_RS03410 PF00460 Flagella basal body rod protein CJ8421_RS03410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ8421_RS03415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ8421_RS03415 PF00460 Flagella basal body rod protein CJ8421_RS03420 PF03951 Glutamine synthetase, beta-Grasp domain CJ8421_RS03420 PF00120 Glutamine synthetase, catalytic domain CJ8421_RS03430 PF01136 Peptidase family U32 CJ8421_RS03435 PF00731 AIR carboxylase CJ8421_RS03445 PF02091 Glycyl-tRNA synthetase alpha subunit CJ8421_RS03450 PF01784 NIF3 (NGG1p interacting factor 3) CJ8421_RS03460 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CJ8421_RS03460 PF02390 Putative methyltransferase CJ8421_RS03465 PF00849 RNA pseudouridylate synthase CJ8421_RS03470 PF00448 SRP54-type protein, GTPase domain CJ8421_RS03470 PF02881 SRP54-type protein, helical bundle domain CJ8421_RS03470 PF02978 Signal peptide binding domain CJ8421_RS03475 PF00886 Ribosomal protein S16 CJ8421_RS03485 PF01782 RimM N-terminal domain CJ8421_RS03485 PF05239 PRC-barrel domain CJ8421_RS03490 PF01746 tRNA (Guanine-1)-methyltransferase CJ8421_RS03495 PF01245 Ribosomal protein L19 CJ8421_RS03500 PF00576 HIUase/Transthyretin family CJ8421_RS03505 PF01474 Class-II DAHP synthetase family CJ8421_RS03510 PF03960 ArsC family CJ8421_RS03515 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJ8421_RS03515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJ8421_RS03515 PF02811 PHP domain CJ8421_RS03515 PF14579 Helix-hairpin-helix motif CJ8421_RS03520 PF01168 Alanine racemase, N-terminal domain CJ8421_RS03525 PF00669 Bacterial flagellin N-terminal helical region CJ8421_RS03535 PF17827 PrmC N-terminal domain CJ8421_RS03535 PF05175 Methyltransferase small domain CJ8421_RS03540 PF01435 Peptidase family M48 CJ8421_RS03550 PF00994 Probable molybdopterin binding domain CJ8421_RS03555 PF01544 CorA-like Mg2+ transporter protein CJ8421_RS03575 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS03585 PF08402 TOBE domain CJ8421_RS03585 PF00005 ABC transporter CJ8421_RS03595 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ8421_RS03675 PF07282 Putative transposase DNA-binding domain CJ8421_RS03675 PF01385 Probable transposase CJ8421_RS03675 PF12323 Helix-turn-helix domain CJ8421_RS03680 PF03544 Gram-negative bacterial TonB protein C-terminal CJ8421_RS03685 PF00593 TonB dependent receptor CJ8421_RS03685 PF07715 TonB-dependent Receptor Plug Domain CJ8421_RS03695 PF01025 GrpE CJ8421_RS03700 PF00012 Hsp70 protein CJ8421_RS03705 PF12706 Beta-lactamase superfamily domain CJ8421_RS03715 PF00155 Aminotransferase class I and II CJ8421_RS03720 PF00132 Bacterial transferase hexapeptide (six repeats) CJ8421_RS03720 PF06426 Serine acetyltransferase, N-terminal CJ8421_RS03725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJ8421_RS03725 PF17944 Arginine decarboxylase C-terminal helical extension CJ8421_RS03725 PF17810 Arginine decarboxylase helical bundle domain CJ8421_RS03730 PF13393 Histidyl-tRNA synthetase CJ8421_RS03730 PF03129 Anticodon binding domain CJ8421_RS03735 PF02223 Thymidylate kinase CJ8421_RS03740 PF01467 Cytidylyltransferase-like CJ8421_RS03745 PF02441 Flavoprotein CJ8421_RS03755 PF03180 NLPA lipoprotein CJ8421_RS03760 PF03180 NLPA lipoprotein CJ8421_RS03765 PF03180 NLPA lipoprotein CJ8421_RS03770 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS03775 PF00005 ABC transporter CJ8421_RS03775 PF09383 NIL domain CJ8421_RS03780 PF10458 Valyl tRNA synthetase tRNA binding arm CJ8421_RS03780 PF00133 tRNA synthetases class I (I, L, M and V) CJ8421_RS03780 PF08264 Anticodon-binding domain of tRNA CJ8421_RS03790 PF13361 UvrD-like helicase C-terminal domain CJ8421_RS03790 PF00580 UvrD/REP helicase N-terminal domain CJ8421_RS03800 PF08534 Redoxin CJ8421_RS03805 PF00384 Molybdopterin oxidoreductase CJ8421_RS03805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ8421_RS03805 PF01568 Molydopterin dinucleotide binding domain CJ8421_RS03810 PF12800 4Fe-4S binding domain CJ8421_RS03810 PF12838 4Fe-4S dicluster domain CJ8421_RS03815 PF12801 4Fe-4S binding domain CJ8421_RS03815 PF13187 4Fe-4S dicluster domain CJ8421_RS03820 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CJ8421_RS03850 PF01743 Poly A polymerase head domain CJ8421_RS03850 PF12627 Probable RNA and SrmB- binding site of polymerase A CJ8421_RS03850 PF13735 tRNA nucleotidyltransferase domain 2 putative CJ8421_RS03855 PF00551 Formyl transferase CJ8421_RS03855 PF01842 ACT domain CJ8421_RS03860 PF00266 Aminotransferase class-V CJ8421_RS03870 PF00512 His Kinase A (phospho-acceptor) domain CJ8421_RS03870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ8421_RS03885 PF08245 Mur ligase middle domain CJ8421_RS03885 PF02875 Mur ligase family, glutamate ligase domain CJ8421_RS03900 PF01820 D-ala D-ala ligase N-terminus CJ8421_RS03900 PF07478 D-ala D-ala ligase C-terminus CJ8421_RS03905 PF07499 RuvA, C-terminal domain CJ8421_RS03905 PF01330 RuvA N terminal domain CJ8421_RS03915 PF03023 Lipid II flippase MurJ CJ8421_RS03920 PF01406 tRNA synthetases class I (C) catalytic domain CJ8421_RS03920 PF09190 DALR domain CJ8421_RS03925 PF00664 ABC transporter transmembrane region CJ8421_RS03925 PF00005 ABC transporter CJ8421_RS03930 PF01180 Dihydroorotate dehydrogenase CJ8421_RS03935 PF05193 Peptidase M16 inactive domain CJ8421_RS03935 PF00675 Insulinase (Peptidase family M16) CJ8421_RS03940 PF00701 Dihydrodipicolinate synthetase family CJ8421_RS03955 PF00753 Metallo-beta-lactamase superfamily CJ8421_RS03960 PF02540 NAD synthase CJ8421_RS03965 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CJ8421_RS03970 PF00291 Pyridoxal-phosphate dependent enzyme CJ8421_RS03975 PF02348 Cytidylyltransferase CJ8421_RS03995 PF03432 Relaxase/Mobilisation nuclease domain CJ8421_RS04005 PF14492 Elongation Factor G, domain II CJ8421_RS04005 PF00679 Elongation factor G C-terminus CJ8421_RS04005 PF03764 Elongation factor G, domain IV CJ8421_RS04005 PF00009 Elongation factor Tu GTP binding domain CJ8421_RS04020 PF01385 Probable transposase CJ8421_RS04020 PF12323 Helix-turn-helix domain CJ8421_RS04020 PF07282 Putative transposase DNA-binding domain CJ8421_RS04025 PF09278 MerR, DNA binding CJ8421_RS04025 PF00376 MerR family regulatory protein CJ8421_RS04040 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ8421_RS04045 PF00813 FliP family CJ8421_RS04055 PF04127 DNA / pantothenate metabolism flavoprotein CJ8421_RS04055 PF02441 Flavoprotein CJ8421_RS04065 PF01255 Putative undecaprenyl diphosphate synthase CJ8421_RS04080 PF01416 tRNA pseudouridine synthase CJ8421_RS04085 PF00291 Pyridoxal-phosphate dependent enzyme CJ8421_RS04085 PF13291 ACT domain CJ8421_RS04100 PF05958 tRNA (Uracil-5-)-methyltransferase CJ8421_RS04105 PF03553 Na+/H+ antiporter family CJ8421_RS04110 PF00106 short chain dehydrogenase CJ8421_RS04120 PF11791 Aconitate B N-terminal domain CJ8421_RS04120 PF00330 Aconitase family (aconitate hydratase) CJ8421_RS04120 PF06434 Aconitate hydratase 2 N-terminus CJ8421_RS04125 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJ8421_RS04125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJ8421_RS04135 PF00133 tRNA synthetases class I (I, L, M and V) CJ8421_RS04135 PF09334 tRNA synthetases class I (M) CJ8421_RS04135 PF01588 Putative tRNA binding domain CJ8421_RS04145 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CJ8421_RS04170 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJ8421_RS04175 PF00149 Calcineurin-like phosphoesterase CJ8421_RS04180 PF02666 Phosphatidylserine decarboxylase CJ8421_RS04185 PF01312 FlhB HrpN YscU SpaS Family CJ8421_RS04195 PF07690 Major Facilitator Superfamily CJ8421_RS04210 PF00202 Aminotransferase class-III CJ8421_RS04220 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJ8421_RS04220 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJ8421_RS04225 PF10502 Signal peptidase, peptidase S26 CJ8421_RS04230 PF03453 MoeA N-terminal region (domain I and II) CJ8421_RS04230 PF03454 MoeA C-terminal region (domain IV) CJ8421_RS04230 PF00994 Probable molybdopterin binding domain CJ8421_RS04235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJ8421_RS04250 PF00591 Glycosyl transferase family, a/b domain CJ8421_RS04250 PF02885 Glycosyl transferase family, helical bundle domain CJ8421_RS04250 PF00117 Glutamine amidotransferase class-I CJ8421_RS04255 PF00425 chorismate binding enzyme CJ8421_RS04255 PF04715 Anthranilate synthase component I, N terminal region CJ8421_RS04260 PF18644 Phage integrase SAM-like domain CJ8421_RS04260 PF00589 Phage integrase family CJ8421_RS04265 PF01323 DSBA-like thioredoxin domain CJ8421_RS04270 PF02600 Disulfide bond formation protein DsbB CJ8421_RS04295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJ8421_RS04330 PF00771 FHIPEP family CJ8421_RS04335 PF02082 Transcriptional regulator CJ8421_RS04340 PF00312 Ribosomal protein S15 CJ8421_RS04345 PF01580 FtsK/SpoIIIE family CJ8421_RS04345 PF17854 FtsK alpha domain CJ8421_RS04345 PF09397 Ftsk gamma domain CJ8421_RS04350 PF00700 Bacterial flagellin C-terminal helical region CJ8421_RS04350 PF00669 Bacterial flagellin N-terminal helical region CJ8421_RS04365 PF00005 ABC transporter CJ8421_RS04365 PF16326 ABC transporter C-terminal domain CJ8421_RS04365 PF12848 ABC transporter CJ8421_RS04370 PF16736 Single Cache-like CJ8421_RS04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ8421_RS04370 PF00512 His Kinase A (phospho-acceptor) domain CJ8421_RS04370 PF00989 PAS fold CJ8421_RS04375 PF00072 Response regulator receiver domain CJ8421_RS04375 PF00486 Transcriptional regulatory protein, C terminal CJ8421_RS04380 PF01842 ACT domain CJ8421_RS04380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ8421_RS04380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ8421_RS04390 PF00575 S1 RNA binding domain CJ8421_RS04395 PF02401 LytB protein CJ8421_RS04400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJ8421_RS04405 PF01588 Putative tRNA binding domain CJ8421_RS04405 PF03147 Ferredoxin-fold anticodon binding domain CJ8421_RS04405 PF03484 tRNA synthetase B5 domain CJ8421_RS04405 PF03483 B3/4 domain CJ8421_RS04405 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJ8421_RS04410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJ8421_RS04410 PF01409 tRNA synthetases class II core domain (F) CJ8421_RS04415 PF01230 HIT domain CJ8421_RS04430 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS04435 PF00005 ABC transporter CJ8421_RS04440 PF01235 Sodium:alanine symporter family CJ8421_RS04445 PF00588 SpoU rRNA Methylase family CJ8421_RS04450 PF01168 Alanine racemase, N-terminal domain CJ8421_RS04450 PF00842 Alanine racemase, C-terminal domain CJ8421_RS04475 PF02630 SCO1/SenC CJ8421_RS04480 PF00291 Pyridoxal-phosphate dependent enzyme CJ8421_RS04485 PF00216 Bacterial DNA-binding protein CJ8421_RS04495 PF03061 Thioesterase superfamily CJ8421_RS04505 PF13722 5TM C-terminal transporter carbon starvation CstA CJ8421_RS04505 PF02554 Carbon starvation protein CstA CJ8421_RS04510 PF14572 Phosphoribosyl synthetase-associated domain CJ8421_RS04510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJ8421_RS04515 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS04520 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS04525 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ8421_RS04530 PF00005 ABC transporter CJ8421_RS04535 PF01739 CheR methyltransferase, SAM binding domain CJ8421_RS04540 PF01339 CheB methylesterase CJ8421_RS04540 PF00072 Response regulator receiver domain CJ8421_RS04545 PF02502 Ribose/Galactose Isomerase CJ8421_RS04555 PF00156 Phosphoribosyl transferase domain CJ8421_RS04565 PF00883 Cytosol aminopeptidase family, catalytic domain CJ8421_RS04570 PF06071 Protein of unknown function (DUF933) CJ8421_RS04570 PF01926 50S ribosome-binding GTPase CJ8421_RS04575 PF14698 Argininosuccinate lyase C-terminal CJ8421_RS04575 PF00206 Lyase CJ8421_RS04580 PF01293 Phosphoenolpyruvate carboxykinase CJ8421_RS04585 PF00364 Biotin-requiring enzyme CJ8421_RS04585 PF00682 HMGL-like CJ8421_RS04585 PF02436 Conserved carboxylase domain CJ8421_RS04590 PF00209 Sodium:neurotransmitter symporter family CJ8421_RS04595 PF00209 Sodium:neurotransmitter symporter family CJ8421_RS04600 PF00137 ATP synthase subunit C CJ8421_RS04615 PF00501 AMP-binding enzyme CJ8421_RS04615 PF01553 Acyltransferase CJ8421_RS04660 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS04670 PF01043 SecA preprotein cross-linking domain CJ8421_RS04670 PF07517 SecA DEAD-like domain CJ8421_RS04670 PF07516 SecA Wing and Scaffold domain CJ8421_RS04670 PF02810 SEC-C motif CJ8421_RS04675 PF03548 Outer membrane lipoprotein carrier protein LolA CJ8421_RS04685 PF05970 PIF1-like helicase CJ8421_RS04685 PF02689 Helicase CJ8421_RS04695 PF00795 Carbon-nitrogen hydrolase CJ8421_RS04700 PF01545 Cation efflux family CJ8421_RS04700 PF16916 Dimerisation domain of Zinc Transporter CJ8421_RS04705 PF04371 Porphyromonas-type peptidyl-arginine deiminase CJ8421_RS04715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ8421_RS04715 PF02743 Cache domain CJ8421_RS04715 PF00672 HAMP domain CJ8421_RS04730 PF01808 AICARFT/IMPCHase bienzyme CJ8421_RS04730 PF02142 MGS-like domain CJ8421_RS04735 PF05099 Tellurite resistance protein TerB CJ8421_RS04735 PF00226 DnaJ domain CJ8421_RS04740 PF02769 AIR synthase related protein, C-terminal domain CJ8421_RS04740 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJ8421_RS04740 PF00586 AIR synthase related protein, N-terminal domain CJ8421_RS04745 PF10396 GTP-binding protein TrmE N-terminus CJ8421_RS04745 PF12631 MnmE helical domain CJ8421_RS04745 PF01926 50S ribosome-binding GTPase CJ8421_RS04755 PF02096 60Kd inner membrane protein CJ8421_RS04755 PF14849 YidC periplasmic domain CJ8421_RS04760 PF01809 Putative membrane protein insertion efficiency factor CJ8421_RS04765 PF00825 Ribonuclease P CJ8421_RS04770 PF00468 Ribosomal protein L34 CJ8421_RS04790 PF03061 Thioesterase superfamily CJ8421_RS04845 PF08003 Protein of unknown function (DUF1698) CJ8421_RS04860 PF00565 Staphylococcal nuclease homologue CJ8421_RS04865 PF01546 Peptidase family M20/M25/M40 CJ8421_RS04865 PF07687 Peptidase dimerisation domain CJ8421_RS04870 PF08946 Osmosensory transporter coiled coil CJ8421_RS04870 PF00083 Sugar (and other) transporter CJ8421_RS04875 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ8421_RS04880 PF16668 Adhesin from Campylobacter CJ8421_RS04885 PF03883 Peroxide stress protein YaaA CJ8421_RS04890 PF07687 Peptidase dimerisation domain CJ8421_RS04890 PF01546 Peptidase family M20/M25/M40 CJ8421_RS04895 PF07690 Major Facilitator Superfamily CJ8421_RS04915 PF02754 Cysteine-rich domain CJ8421_RS04915 PF13183 4Fe-4S dicluster domain CJ8421_RS04915 PF02665 Nitrate reductase gamma subunit CJ8421_RS04920 PF04055 Radical SAM superfamily CJ8421_RS04920 PF06969 HemN C-terminal domain CJ8421_RS04925 PF10788 Protein of unknown function (DUF2603) CJ8421_RS04930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJ8421_RS04930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJ8421_RS04935 PF00490 Delta-aminolevulinic acid dehydratase CJ8421_RS04940 PF00925 GTP cyclohydrolase II CJ8421_RS04945 PF02527 rRNA small subunit methyltransferase G CJ8421_RS04955 PF03601 Conserved hypothetical protein 698 CJ8421_RS04960 PF03466 LysR substrate binding domain CJ8421_RS04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ8421_RS04965 PF00140 Sigma-70 factor, region 1.2 CJ8421_RS04965 PF04545 Sigma-70, region 4 CJ8421_RS04965 PF04539 Sigma-70 region 3 CJ8421_RS04965 PF04542 Sigma-70 region 2 CJ8421_RS04985 PF06480 FtsH Extracellular CJ8421_RS04985 PF17862 AAA+ lid domain CJ8421_RS04985 PF00004 ATPase family associated with various cellular activities (AAA) CJ8421_RS04985 PF01434 Peptidase family M41 CJ8421_RS04990 PF00919 Uncharacterized protein family UPF0004 CJ8421_RS04990 PF04055 Radical SAM superfamily CJ8421_RS05000 PF01761 3-dehydroquinate synthase CJ8421_RS05010 PF01702 Queuine tRNA-ribosyltransferase CJ8421_RS05030 PF05140 ResB-like family CJ8421_RS05030 PF01578 Cytochrome C assembly protein CJ8421_RS05035 PF00005 ABC transporter CJ8421_RS05040 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJ8421_RS05040 PF00005 ABC transporter CJ8421_RS05045 PF11862 Domain of unknown function (DUF3382) CJ8421_RS05045 PF02653 Branched-chain amino acid transport system / permease component CJ8421_RS05050 PF02653 Branched-chain amino acid transport system / permease component CJ8421_RS05055 PF13458 Periplasmic binding protein CJ8421_RS05060 PF13458 Periplasmic binding protein CJ8421_RS05080 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ8421_RS05080 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJ8421_RS05085 PF00072 Response regulator receiver domain CJ8421_RS05085 PF00158 Sigma-54 interaction domain CJ8421_RS05100 PF03989 DNA gyrase C-terminal domain, beta-propeller CJ8421_RS05100 PF00521 DNA gyrase/topoisomerase IV, subunit A CJ8421_RS05115 PF03144 Elongation factor Tu domain 2 CJ8421_RS05115 PF00009 Elongation factor Tu GTP binding domain CJ8421_RS05115 PF00679 Elongation factor G C-terminus CJ8421_RS05115 PF06421 GTP-binding protein LepA C-terminus CJ8421_RS05125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ8421_RS05125 PF00529 HlyD membrane-fusion protein of T1SS CJ8421_RS05130 PF00873 AcrB/AcrD/AcrF family CJ8421_RS05140 PF04377 Arginine-tRNA-protein transferase, C terminus CJ8421_RS05140 PF04376 Arginine-tRNA-protein transferase, N terminus CJ8421_RS05150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJ8421_RS05150 PF00289 Biotin carboxylase, N-terminal domain CJ8421_RS05150 PF02785 Biotin carboxylase C-terminal domain CJ8421_RS05155 PF01098 Cell cycle protein CJ8421_RS05160 PF04101 Glycosyltransferase family 28 C-terminal domain CJ8421_RS05160 PF03033 Glycosyltransferase family 28 N-terminal domain CJ8421_RS05175 PF12833 Helix-turn-helix domain CJ8421_RS05180 PF02581 Thiamine monophosphate synthase CJ8421_RS05185 PF04055 Radical SAM superfamily CJ8421_RS05185 PF06968 Biotin and Thiamin Synthesis associated domain CJ8421_RS05190 PF05690 Thiazole biosynthesis protein ThiG CJ8421_RS05195 PF00899 ThiF family CJ8421_RS05195 PF00581 Rhodanese-like domain CJ8421_RS05205 PF01546 Peptidase family M20/M25/M40 CJ8421_RS05205 PF07687 Peptidase dimerisation domain CJ8421_RS05215 PF02146 Sir2 family CJ8421_RS05225 PF01713 Smr domain CJ8421_RS05225 PF00488 MutS domain V CJ8421_RS05235 PF02875 Mur ligase family, glutamate ligase domain CJ8421_RS05235 PF01225 Mur ligase family, catalytic domain CJ8421_RS05235 PF08245 Mur ligase middle domain CJ8421_RS05255 PF00571 CBS domain CJ8421_RS05255 PF00478 IMP dehydrogenase / GMP reductase domain CJ8421_RS05260 PF01425 Amidase CJ8421_RS05270 PF00133 tRNA synthetases class I (I, L, M and V) CJ8421_RS05270 PF08264 Anticodon-binding domain of tRNA CJ8421_RS05275 PF00994 Probable molybdopterin binding domain CJ8421_RS05275 PF02464 Competence-damaged protein CJ8421_RS05280 PF00583 Acetyltransferase (GNAT) family CJ8421_RS05290 PF00881 Nitroreductase family CJ8421_RS05295 PF01066 CDP-alcohol phosphatidyltransferase CJ8421_RS05300 PF02163 Peptidase family M50 CJ8421_RS05300 PF17820 PDZ domain CJ8421_RS05305 PF04393 Protein of unknown function (DUF535) CJ8421_RS05310 PF01250 Ribosomal protein S6 CJ8421_RS05315 PF00436 Single-strand binding protein family CJ8421_RS05320 PF01084 Ribosomal protein S18 CJ8421_RS05325 PF00004 ATPase family associated with various cellular activities (AAA) CJ8421_RS05325 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJ8421_RS05325 PF05362 Lon protease (S16) C-terminal proteolytic domain CJ8421_RS05335 PF02623 FliW protein CJ8421_RS05340 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJ8421_RS05340 PF03807 NADP oxidoreductase coenzyme F420-dependent CJ8421_RS05365 PF02581 Thiamine monophosphate synthase CJ8421_RS05370 PF08543 Phosphomethylpyrimidine kinase CJ8421_RS05385 PF17757 UvrB interaction domain CJ8421_RS05385 PF03461 TRCF domain CJ8421_RS05385 PF00271 Helicase conserved C-terminal domain CJ8421_RS05385 PF00270 DEAD/DEAH box helicase CJ8421_RS05385 PF02559 CarD-like/TRCF domain CJ8421_RS05395 PF04225 Opacity-associated protein A LysM-like domain CJ8421_RS05395 PF01551 Peptidase family M23 CJ8421_RS05400 PF08245 Mur ligase middle domain CJ8421_RS05400 PF02875 Mur ligase family, glutamate ligase domain CJ8421_RS05415 PF00133 tRNA synthetases class I (I, L, M and V) CJ8421_RS05415 PF13603 Leucyl-tRNA synthetase, Domain 2 CJ8421_RS05415 PF09334 tRNA synthetases class I (M) CJ8421_RS05420 PF07549 SecD/SecF GG Motif CJ8421_RS05420 PF02355 Protein export membrane protein CJ8421_RS05425 PF02355 Protein export membrane protein CJ8421_RS05430 PF02699 Preprotein translocase subunit CJ8421_RS05440 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJ8421_RS05440 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJ8421_RS05440 PF02772 S-adenosylmethionine synthetase, central domain CJ8421_RS05445 PF00375 Sodium:dicarboxylate symporter family CJ8421_RS05450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJ8421_RS05450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJ8421_RS05455 PF08439 Oligopeptidase F CJ8421_RS05455 PF01432 Peptidase family M3 CJ8421_RS05465 PF13361 UvrD-like helicase C-terminal domain CJ8421_RS05465 PF00580 UvrD/REP helicase N-terminal domain CJ8421_RS05470 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJ8421_RS05475 PF02599 Global regulator protein family CJ8421_RS05480 PF00288 GHMP kinases N terminal domain CJ8421_RS05485 PF01668 SmpB protein CJ8421_RS05495 PF02617 ATP-dependent Clp protease adaptor protein ClpS CJ8421_RS05500 PF10431 C-terminal, D2-small domain, of ClpB protein CJ8421_RS05500 PF07724 AAA domain (Cdc48 subfamily) CJ8421_RS05500 PF17871 AAA lid domain CJ8421_RS05500 PF00004 ATPase family associated with various cellular activities (AAA) CJ8421_RS05500 PF02861 Clp amino terminal domain, pathogenicity island component CJ8421_RS05505 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CJ8421_RS05510 PF08447 PAS fold CJ8421_RS05510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ8421_RS05510 PF13426 PAS domain CJ8421_RS05515 PF01914 MarC family integral membrane protein CJ8421_RS05520 PF01641 SelR domain CJ8421_RS05525 PF04305 Protein of unknown function (DUF455) CJ8421_RS05530 PF01066 CDP-alcohol phosphatidyltransferase CJ8421_RS05540 PF00004 ATPase family associated with various cellular activities (AAA) CJ8421_RS05540 PF17862 AAA+ lid domain CJ8421_RS05540 PF01434 Peptidase family M41 CJ8421_RS05550 PF00072 Response regulator receiver domain CJ8421_RS05560 PF02719 Polysaccharide biosynthesis protein CJ8421_RS05565 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ8421_RS05570 PF00132 Bacterial transferase hexapeptide (six repeats) CJ8421_RS05570 PF17836 PglD N-terminal domain CJ8421_RS05575 PF02397 Bacterial sugar transferase CJ8421_RS05580 PF00534 Glycosyl transferases group 1 CJ8421_RS05580 PF13477 Glycosyl transferase 4-like CJ8421_RS05585 PF18527 STT3/PglB C-terminal beta-barrel domain CJ8421_RS05585 PF02516 Oligosaccharyl transferase STT3 subunit CJ8421_RS05590 PF13439 Glycosyltransferase Family 4 CJ8421_RS05590 PF00534 Glycosyl transferases group 1 CJ8421_RS05595 PF00535 Glycosyl transferase family 2 CJ8421_RS05600 PF13439 Glycosyltransferase Family 4 CJ8421_RS05600 PF00534 Glycosyl transferases group 1 CJ8421_RS05605 PF00005 ABC transporter CJ8421_RS05605 PF00664 ABC transporter transmembrane region CJ8421_RS05610 PF16363 GDP-mannose 4,6 dehydratase CJ8421_RS05620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJ8421_RS05625 PF03279 Bacterial lipid A biosynthesis acyltransferase CJ8421_RS05630 PF00535 Glycosyl transferase family 2 CJ8421_RS05635 PF00483 Nucleotidyl transferase CJ8421_RS05640 PF16363 GDP-mannose 4,6 dehydratase CJ8421_RS05645 PF05523 WxcM-like, C-terminal CJ8421_RS05650 PF05523 WxcM-like, C-terminal CJ8421_RS05665 PF00535 Glycosyl transferase family 2 CJ8421_RS05670 PF00535 Glycosyl transferase family 2 CJ8421_RS05675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ8421_RS05705 PF00535 Glycosyl transferase family 2 CJ8421_RS05715 PF13580 SIS domain CJ8421_RS05720 PF01467 Cytidylyltransferase-like CJ8421_RS05720 PF00294 pfkB family carbohydrate kinase CJ8421_RS05725 PF01370 NAD dependent epimerase/dehydratase family CJ8421_RS05730 PF08645 Polynucleotide kinase 3 phosphatase CJ8421_RS05745 PF00403 Heavy-metal-associated domain CJ8421_RS05750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ8421_RS05750 PF07497 Rho termination factor, RNA-binding domain CJ8421_RS05750 PF07498 Rho termination factor, N-terminal domain CJ8421_RS05755 PF12169 DNA polymerase III subunits gamma and tau domain III CJ8421_RS05755 PF12170 DNA polymerase III tau subunit V interacting with alpha CJ8421_RS05765 PF00403 Heavy-metal-associated domain CJ8421_RS05785 PF06738 Putative threonine/serine exporter CJ8421_RS05785 PF12821 Threonine/Serine exporter, ThrE CJ8421_RS05795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJ8421_RS05795 PF00056 lactate/malate dehydrogenase, NAD binding domain CJ8421_RS05800 PF09335 SNARE associated Golgi protein CJ8421_RS05815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJ8421_RS05820 PF01709 Transcriptional regulator CJ8421_RS05825 PF00893 Small Multidrug Resistance protein CJ8421_RS05830 PF00893 Small Multidrug Resistance protein CJ8421_RS05835 PF03485 Arginyl tRNA synthetase N terminal domain CJ8421_RS05835 PF00750 tRNA synthetases class I (R) CJ8421_RS05835 PF05746 DALR anticodon binding domain CJ8421_RS05840 PF02416 mttA/Hcf106 family CJ8421_RS05845 PF00625 Guanylate kinase CJ8421_RS05855 PF01311 Bacterial export proteins, family 1 CJ8421_RS05860 PF00005 ABC transporter CJ8421_RS05865 PF00889 Elongation factor TS CJ8421_RS05870 PF00318 Ribosomal protein S2 CJ8421_RS05885 PF00033 Cytochrome b/b6/petB CJ8421_RS05885 PF00032 Cytochrome b(C-terminal)/b6/petD CJ8421_RS05890 PF00355 Rieske [2Fe-2S] domain CJ8421_RS05890 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CJ8421_RS05895 PF02040 Arsenical pump membrane protein CJ8421_RS05900 PF13932 GidA associated domain CJ8421_RS05900 PF01134 Glucose inhibited division protein A CJ8421_RS05910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ8421_RS05910 PF08447 PAS fold CJ8421_RS05910 PF13426 PAS domain CJ8421_RS05920 PF00375 Sodium:dicarboxylate symporter family CJ8421_RS05930 PF01384 Phosphate transporter family CJ8421_RS05935 PF01979 Amidohydrolase family CJ8421_RS05940 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJ8421_RS05940 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJ8421_RS05945 PF02934 GatB/GatE catalytic domain CJ8421_RS05945 PF02637 GatB domain CJ8421_RS05950 PF02664 S-Ribosylhomocysteinase (LuxS) CJ8421_RS05955 PF03171 2OG-Fe(II) oxygenase superfamily CJ8421_RS05955 PF14226 non-haem dioxygenase in morphine synthesis N-terminal CJ8421_RS05960 PF03180 NLPA lipoprotein CJ8421_RS05965 PF08267 Cobalamin-independent synthase, N-terminal domain CJ8421_RS05965 PF01717 Cobalamin-independent synthase, Catalytic domain CJ8421_RS05970 PF02219 Methylenetetrahydrofolate reductase CJ8421_RS05980 PF00119 ATP synthase A chain CJ8421_RS05985 PF18073 Rubredoxin metal binding domain CJ8421_RS05990 PF00448 SRP54-type protein, GTPase domain CJ8421_RS06005 PF01966 HD domain CJ8421_RS06005 PF12072 Domain of unknown function (DUF3552) CJ8421_RS06020 PF03631 Virulence factor BrkB CJ8421_RS06025 PF01565 FAD binding domain CJ8421_RS06025 PF02913 FAD linked oxidases, C-terminal domain CJ8421_RS06035 PF01476 LysM domain CJ8421_RS06035 PF08525 Opacity-associated protein A N-terminal motif CJ8421_RS06035 PF01551 Peptidase family M23 CJ8421_RS06045 PF02578 Multi-copper polyphenol oxidoreductase laccase CJ8421_RS06050 PF00677 Lumazine binding domain CJ8421_RS06060 PF00166 Chaperonin 10 Kd subunit CJ8421_RS06065 PF00118 TCP-1/cpn60 chaperonin family CJ8421_RS06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ8421_RS06075 PF00486 Transcriptional regulatory protein, C terminal CJ8421_RS06075 PF00072 Response regulator receiver domain CJ8421_RS06100 PF00072 Response regulator receiver domain CJ8421_RS06100 PF00486 Transcriptional regulatory protein, C terminal CJ8421_RS06105 PF00595 PDZ domain CJ8421_RS06110 PF01556 DnaJ C terminal domain CJ8421_RS06110 PF00226 DnaJ domain CJ8421_RS06115 PF13411 MerR HTH family regulatory protein CJ8421_RS06120 PF02254 TrkA-N domain CJ8421_RS06120 PF00999 Sodium/hydrogen exchanger family CJ8421_RS06130 PF13419 Haloacid dehalogenase-like hydrolase CJ8421_RS06135 PF02092 Glycyl-tRNA synthetase beta subunit CJ8421_RS06140 PF01551 Peptidase family M23 CJ8421_RS06150 PF02541 Ppx/GppA phosphatase family CJ8421_RS06155 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CJ8421_RS06160 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJ8421_RS06170 PF07690 Major Facilitator Superfamily CJ8421_RS06180 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJ8421_RS06185 PF04055 Radical SAM superfamily CJ8421_RS06195 PF08459 UvrC Helix-hairpin-helix N-terminal CJ8421_RS06195 PF02151 UvrB/uvrC motif CJ8421_RS06195 PF01541 GIY-YIG catalytic domain CJ8421_RS06205 PF02540 NAD synthase CJ8421_RS06205 PF00958 GMP synthase C terminal domain CJ8421_RS06205 PF00117 Glutamine amidotransferase class-I CJ8421_RS06215 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJ8421_RS06215 PF02843 Phosphoribosylglycinamide synthetase, C domain CJ8421_RS06215 PF02844 Phosphoribosylglycinamide synthetase, N domain CJ8421_RS06230 PF01138 3' exoribonuclease family, domain 1 CJ8421_RS06230 PF00013 KH domain CJ8421_RS06230 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CJ8421_RS06230 PF03725 3' exoribonuclease family, domain 2 CJ8421_RS06230 PF00575 S1 RNA binding domain CJ8421_RS06245 PF07690 Major Facilitator Superfamily CJ8421_RS06250 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJ8421_RS06255 PF05538 Campylobacter major outer membrane protein CJ8421_RS06260 PF00684 DnaJ central domain CJ8421_RS06260 PF01556 DnaJ C terminal domain CJ8421_RS06260 PF00226 DnaJ domain CJ8421_RS06265 PF00072 Response regulator receiver domain CJ8421_RS06265 PF00486 Transcriptional regulatory protein, C terminal CJ8421_RS06275 PF02132 RecR protein CJ8421_RS06275 PF13662 Toprim domain CJ8421_RS06280 PF01750 Hydrogenase maturation protease CJ8421_RS06285 PF01292 Prokaryotic cytochrome b561 CJ8421_RS06290 PF00374 Nickel-dependent hydrogenase CJ8421_RS06295 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJ8421_RS06295 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJ8421_RS06295 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CJ8421_RS06300 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CJ8421_RS06300 PF01266 FAD dependent oxidoreductase CJ8421_RS06305 PF01520 N-acetylmuramoyl-L-alanine amidase CJ8421_RS06305 PF11741 AMIN domain CJ8421_RS06315 PF00579 tRNA synthetases class I (W and Y) CJ8421_RS06320 PF04607 Region found in RelA / SpoT proteins CJ8421_RS06320 PF02824 TGS domain CJ8421_RS06320 PF13291 ACT domain CJ8421_RS06325 PF01192 RNA polymerase Rpb6 CJ8421_RS06330 PF00696 Amino acid kinase family CJ8421_RS06345 PF00005 ABC transporter CJ8421_RS06345 PF09383 NIL domain CJ8421_RS06350 PF02390 Putative methyltransferase CJ8421_RS06360 PF01479 S4 domain CJ8421_RS06360 PF00849 RNA pseudouridylate synthase CJ8421_RS06365 PF01098 Cell cycle protein CJ8421_RS06380 PF02386 Cation transport protein CJ8421_RS06385 PF02254 TrkA-N domain CJ8421_RS06385 PF02080 TrkA-C domain CJ8421_RS06390 PF02621 Menaquinone biosynthesis CJ8421_RS06400 PF01515 Phosphate acetyl/butaryl transferase CJ8421_RS06400 PF00390 Malic enzyme, N-terminal domain CJ8421_RS06400 PF03949 Malic enzyme, NAD binding domain CJ8421_RS06405 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJ8421_RS06415 PF00289 Biotin carboxylase, N-terminal domain CJ8421_RS06415 PF02785 Biotin carboxylase C-terminal domain CJ8421_RS06415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJ8421_RS06420 PF00364 Biotin-requiring enzyme CJ8421_RS06425 PF00692 dUTPase CJ8421_RS06430 PF02719 Polysaccharide biosynthesis protein CJ8421_RS06435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ8421_RS06470 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJ8421_RS06470 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJ8421_RS06490 PF00550 Phosphopantetheine attachment site CJ8421_RS06490 PF13193 AMP-binding enzyme C-terminal domain CJ8421_RS06490 PF00501 AMP-binding enzyme CJ8421_RS06490 PF00668 Condensation domain CJ8421_RS06510 PF02348 Cytidylyltransferase CJ8421_RS06520 PF13302 Acetyltransferase (GNAT) domain CJ8421_RS06525 PF00977 Histidine biosynthesis protein CJ8421_RS06530 PF00117 Glutamine amidotransferase class-I CJ8421_RS06540 PF03102 NeuB family CJ8421_RS06540 PF08666 SAF domain CJ8421_RS06550 PF16363 GDP-mannose 4,6 dehydratase CJ8421_RS06555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ8421_RS06590 PF08666 SAF domain CJ8421_RS06590 PF03102 NeuB family CJ8421_RS06595 PF02350 UDP-N-acetylglucosamine 2-epimerase CJ8421_RS06600 PF00483 Nucleotidyl transferase CJ8421_RS06610 PF02348 Cytidylyltransferase CJ8421_RS06640 PF00669 Bacterial flagellin N-terminal helical region CJ8421_RS06640 PF07196 Flagellin hook IN motif CJ8421_RS06640 PF00700 Bacterial flagellin C-terminal helical region CJ8421_RS06645 PF00669 Bacterial flagellin N-terminal helical region CJ8421_RS06645 PF07196 Flagellin hook IN motif CJ8421_RS06645 PF00700 Bacterial flagellin C-terminal helical region CJ8421_RS06665 PF08334 Type II secretion system (T2SS), protein G CJ8421_RS06665 PF07963 Prokaryotic N-terminal methylation motif CJ8421_RS06670 PF00814 Glycoprotease family CJ8421_RS06680 PF13288 DXP reductoisomerase C-terminal domain CJ8421_RS06680 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJ8421_RS06680 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJ8421_RS06695 PF05670 NFACT protein RNA binding domain CJ8421_RS06700 PF12804 MobA-like NTP transferase domain CJ8421_RS06705 PF02253 Phospholipase A1 CJ8421_RS06715 PF01032 FecCD transport family CJ8421_RS06720 PF00005 ABC transporter CJ8421_RS06725 PF01497 Periplasmic binding protein CJ8421_RS06740 PF02335 Cytochrome c552 CJ8421_RS06745 PF03264 NapC/NirT cytochrome c family, N-terminal region CJ8421_RS06750 PF13090 Polyphosphate kinase C-terminal domain 2 CJ8421_RS06750 PF17941 Polyphosphate kinase C-terminal domain 1 CJ8421_RS06750 PF13089 Polyphosphate kinase N-terminal domain CJ8421_RS06750 PF02503 Polyphosphate kinase middle domain CJ8421_RS06780 PF05491 RuvB C-terminal winged helix domain CJ8421_RS06780 PF17864 RuvB AAA lid domain CJ8421_RS06780 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJ8421_RS06785 PF01594 AI-2E family transporter CJ8421_RS06790 PF10415 Fumarase C C-terminus CJ8421_RS06790 PF00206 Lyase CJ8421_RS06795 PF12951 Passenger-associated-transport-repeat CJ8421_RS06795 PF03797 Autotransporter beta-domain CJ8421_RS06795 PF00082 Subtilase family CJ8421_RS06800 PF01380 SIS domain CJ8421_RS06810 PF04055 Radical SAM superfamily CJ8421_RS06815 PF00860 Permease family CJ8421_RS06820 PF00156 Phosphoribosyl transferase domain CJ8421_RS06825 PF04333 MlaA lipoprotein CJ8421_RS06840 PF01725 Ham1 family CJ8421_RS06845 PF07690 Major Facilitator Superfamily CJ8421_RS06855 PF03841 L-seryl-tRNA selenium transferase CJ8421_RS06860 PF09106 Elongation factor SelB, winged helix CJ8421_RS06860 PF09107 Elongation factor SelB, winged helix CJ8421_RS06860 PF00009 Elongation factor Tu GTP binding domain CJ8421_RS06860 PF03144 Elongation factor Tu domain 2 CJ8421_RS06865 PF13098 Thioredoxin-like domain CJ8421_RS06875 PF00258 Flavodoxin CJ8421_RS06890 PF00199 Catalase CJ8421_RS06890 PF06628 Catalase-related immune-responsive CJ8421_RS06900 PF13309 HTH domain CJ8421_RS06900 PF08348 YheO-like PAS domain CJ8421_RS06905 PF01042 Endoribonuclease L-PSP CJ8421_RS06930 PF04023 FeoA domain CJ8421_RS06935 PF07670 Nucleoside recognition CJ8421_RS06935 PF02421 Ferrous iron transport protein B CJ8421_RS06935 PF07664 Ferrous iron transport protein B C terminus CJ8421_RS06940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJ8421_RS06940 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CJ8421_RS06940 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJ8421_RS06950 PF00121 Triosephosphate isomerase CJ8421_RS06955 PF00162 Phosphoglycerate kinase CJ8421_RS06960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJ8421_RS06960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJ8421_RS06965 PF01467 Cytidylyltransferase-like CJ8421_RS06980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJ8421_RS06980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJ8421_RS06980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJ8421_RS06980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJ8421_RS06985 PF03748 Flagellar basal body-associated protein FliL CJ8421_RS06990 PF01648 4'-phosphopantetheinyl transferase superfamily CJ8421_RS07000 PF00067 Cytochrome P450 CJ8421_RS07010 PF05159 Capsule polysaccharide biosynthesis protein CJ8421_RS07015 PF05159 Capsule polysaccharide biosynthesis protein CJ8421_RS07025 PF00483 Nucleotidyl transferase CJ8421_RS07030 PF00117 Glutamine amidotransferase class-I CJ8421_RS07035 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJ8421_RS07035 PF00391 PEP-utilising enzyme, mobile domain CJ8421_RS07040 PF01209 ubiE/COQ5 methyltransferase family CJ8421_RS07055 PF00483 Nucleotidyl transferase CJ8421_RS07060 PF13580 SIS domain CJ8421_RS07065 PF08544 GHMP kinases C terminal CJ8421_RS07065 PF00288 GHMP kinases N terminal domain CJ8421_RS07070 PF01370 NAD dependent epimerase/dehydratase family CJ8421_RS07075 PF16363 GDP-mannose 4,6 dehydratase CJ8421_RS07080 PF01370 NAD dependent epimerase/dehydratase family CJ8421_RS07095 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJ8421_RS07110 PF00535 Glycosyl transferase family 2 CJ8421_RS07110 PF01501 Glycosyl transferase family 8 CJ8421_RS07115 PF01501 Glycosyl transferase family 8 CJ8421_RS07125 PF05159 Capsule polysaccharide biosynthesis protein CJ8421_RS07130 PF00571 CBS domain CJ8421_RS07130 PF01380 SIS domain CJ8421_RS07135 PF10531 SLBB domain CJ8421_RS07135 PF02563 Polysaccharide biosynthesis/export protein CJ8421_RS07145 PF00005 ABC transporter CJ8421_RS07150 PF01061 ABC-2 type transporter CJ8421_RS07175 PF01171 PP-loop family CJ8421_RS07180 PF00919 Uncharacterized protein family UPF0004 CJ8421_RS07180 PF04055 Radical SAM superfamily CJ8421_RS07185 PF03462 PCRF domain CJ8421_RS07185 PF00472 RF-1 domain CJ8421_RS07195 PF01142 tRNA pseudouridine synthase D (TruD) CJ8421_RS07200 PF02769 AIR synthase related protein, C-terminal domain CJ8421_RS07200 PF00586 AIR synthase related protein, N-terminal domain CJ8421_RS07220 PF02119 Flagellar P-ring protein CJ8421_RS07240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ8421_RS07240 PF07196 Flagellin hook IN motif CJ8421_RS07250 PF01925 Sulfite exporter TauE/SafE CJ8421_RS07255 PF00482 Type II secretion system (T2SS), protein F CJ8421_RS07260 PF00437 Type II/IV secretion system protein CJ8421_RS07275 PF00263 Bacterial type II and III secretion system protein CJ8421_RS07275 PF07655 Secretin N-terminal domain CJ8421_RS07285 PF10371 Domain of unknown function CJ8421_RS07285 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CJ8421_RS07285 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CJ8421_RS07285 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CJ8421_RS07285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ8421_RS07290 PF13419 Haloacid dehalogenase-like hydrolase CJ8421_RS07295 PF00691 OmpA family CJ8421_RS07295 PF05736 OprF membrane domain CJ8421_RS07300 PF00380 Ribosomal protein S9/S16 CJ8421_RS07305 PF00572 Ribosomal protein L13 CJ8421_RS07310 PF00580 UvrD/REP helicase N-terminal domain CJ8421_RS07310 PF13361 UvrD-like helicase C-terminal domain CJ8421_RS07315 PF12705 PD-(D/E)XK nuclease superfamily CJ8421_RS07340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJ8421_RS07340 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CJ8421_RS07355 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJ8421_RS07360 PF00486 Transcriptional regulatory protein, C terminal CJ8421_RS07360 PF00072 Response regulator receiver domain CJ8421_RS07375 PF00117 Glutamine amidotransferase class-I CJ8421_RS07375 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJ8421_RS07395 PF00709 Adenylosuccinate synthetase CJ8421_RS07405 PF04143 Sulphur transport CJ8421_RS07410 PF01206 Sulfurtransferase TusA CJ8421_RS07415 PF00474 Sodium:solute symporter family CJ8421_RS07420 PF01619 Proline dehydrogenase CJ8421_RS07420 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CJ8421_RS07420 PF14850 DNA-binding domain of Proline dehydrogenase CJ8421_RS07420 PF00171 Aldehyde dehydrogenase family CJ8421_RS07425 PF00586 AIR synthase related protein, N-terminal domain CJ8421_RS07425 PF02769 AIR synthase related protein, C-terminal domain CJ8421_RS07435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJ8421_RS07435 PF08447 PAS fold CJ8421_RS07435 PF13426 PAS domain CJ8421_RS07445 PF02634 FdhD/NarQ family CJ8421_RS07455 PF13247 4Fe-4S dicluster domain CJ8421_RS07460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ8421_RS07460 PF00384 Molybdopterin oxidoreductase CJ8421_RS07460 PF01568 Molydopterin dinucleotide binding domain CJ8421_RS07465 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJ8421_RS07465 PF01568 Molydopterin dinucleotide binding domain CJ8421_RS07465 PF00384 Molybdopterin oxidoreductase CJ8421_RS07465 PF00037 4Fe-4S binding domain CJ8421_RS07465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ8421_RS07480 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJ8421_RS07485 PF07732 Multicopper oxidase CJ8421_RS07485 PF07731 Multicopper oxidase CJ8421_RS07495 PF02391 MoaE protein CJ8421_RS07500 PF00994 Probable molybdopterin binding domain CJ8421_RS07500 PF03453 MoeA N-terminal region (domain I and II) CJ8421_RS07500 PF03454 MoeA C-terminal region (domain IV) CJ8421_RS07505 PF09827 CRISPR associated protein Cas2 CJ8421_RS07510 PF01867 CRISPR associated protein Cas1 CJ8421_RS07515 PF13395 HNH endonuclease CJ8421_RS07515 PF18541 RuvC endonuclease subdomain 3 CJ8421_RS07540 PF02769 AIR synthase related protein, C-terminal domain CJ8421_RS07540 PF00586 AIR synthase related protein, N-terminal domain CJ8421_RS07545 PF01121 Dephospho-CoA kinase CJ8421_RS07550 PF01678 Diaminopimelate epimerase CJ8421_RS07555 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CJ8421_RS07565 PF00210 Ferritin-like domain CJ8421_RS07570 PF00342 Phosphoglucose isomerase CJ8421_RS07575 PF00483 Nucleotidyl transferase CJ8421_RS07580 PF16177 Acetyl-coenzyme A synthetase N-terminus CJ8421_RS07580 PF00501 AMP-binding enzyme CJ8421_RS07580 PF13193 AMP-binding enzyme C-terminal domain CJ8421_RS07585 PF00005 ABC transporter CJ8421_RS07590 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS07595 PF12849 PBP superfamily domain CJ8421_RS07600 PF03746 LamB/YcsF family CJ8421_RS07605 PF02682 Carboxyltransferase domain, subdomain C and D CJ8421_RS07610 PF02626 Carboxyltransferase domain, subdomain A and B CJ8421_RS07620 PF02525 Flavodoxin-like fold CJ8421_RS07625 PF01638 HxlR-like helix-turn-helix CJ8421_RS07635 PF08240 Alcohol dehydrogenase GroES-like domain CJ8421_RS07635 PF00107 Zinc-binding dehydrogenase CJ8421_RS07640 PF04851 Type III restriction enzyme, res subunit CJ8421_RS07640 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CJ8421_RS07640 PF00271 Helicase conserved C-terminal domain CJ8421_RS07640 PF08463 EcoEI R protein C-terminal CJ8421_RS07645 PF13166 AAA domain CJ8421_RS07650 PF01420 Type I restriction modification DNA specificity domain CJ8421_RS07655 PF02661 Fic/DOC family CJ8421_RS07655 PF13784 Fic/DOC family N-terminal CJ8421_RS07660 PF02384 N-6 DNA Methylase CJ8421_RS07660 PF12161 HsdM N-terminal domain CJ8421_RS07675 PF07690 Major Facilitator Superfamily CJ8421_RS07695 PF01022 Bacterial regulatory protein, arsR family CJ8421_RS07705 PF01758 Sodium Bile acid symporter family CJ8421_RS07725 PF00361 Proton-conducting membrane transporter CJ8421_RS07730 PF00361 Proton-conducting membrane transporter CJ8421_RS07735 PF00361 Proton-conducting membrane transporter CJ8421_RS07735 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJ8421_RS07740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJ8421_RS07745 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJ8421_RS07750 PF12838 4Fe-4S dicluster domain CJ8421_RS07755 PF00146 NADH dehydrogenase CJ8421_RS07760 PF00384 Molybdopterin oxidoreductase CJ8421_RS07760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ8421_RS07760 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJ8421_RS07760 PF12838 4Fe-4S dicluster domain CJ8421_RS07760 PF01568 Molydopterin dinucleotide binding domain CJ8421_RS07775 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJ8421_RS07780 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJ8421_RS07785 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJ8421_RS07790 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJ8421_RS07795 PF00005 ABC transporter CJ8421_RS07800 PF00005 ABC transporter CJ8421_RS07800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ8421_RS07805 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ8421_RS07805 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS07810 PF00528 Binding-protein-dependent transport system inner membrane component CJ8421_RS07815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ8421_RS07820 PF01565 FAD binding domain CJ8421_RS07820 PF02913 FAD linked oxidases, C-terminal domain CJ8421_RS07825 PF00970 Oxidoreductase FAD-binding domain CJ8421_RS07825 PF00042 Globin CJ8421_RS07825 PF00175 Oxidoreductase NAD-binding domain CJ8421_RS07830 PF00005 ABC transporter CJ8421_RS07835 PF07690 Major Facilitator Superfamily CJ8421_RS07850 PF01176 Translation initiation factor 1A / IF-1 CJ8421_RS07855 PF00444 Ribosomal protein L36 CJ8421_RS07860 PF00416 Ribosomal protein S13/S18 CJ8421_RS07865 PF00411 Ribosomal protein S11 CJ8421_RS07870 PF00163 Ribosomal protein S4/S9 N-terminal domain CJ8421_RS07870 PF01479 S4 domain CJ8421_RS07875 PF01000 RNA polymerase Rpb3/RpoA insert domain CJ8421_RS07875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJ8421_RS07875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJ8421_RS07880 PF01196 Ribosomal protein L17 CJ8421_RS07885 PF08029 HisG, C-terminal domain CJ8421_RS07885 PF01634 ATP phosphoribosyltransferase CJ8421_RS07890 PF00815 Histidinol dehydrogenase CJ8421_RS07895 PF08645 Polynucleotide kinase 3 phosphatase CJ8421_RS07895 PF00475 Imidazoleglycerol-phosphate dehydratase CJ8421_RS07900 PF00117 Glutamine amidotransferase class-I CJ8421_RS07905 PF00977 Histidine biosynthesis protein CJ8421_RS07915 PF00977 Histidine biosynthesis protein CJ8421_RS07920 PF01502 Phosphoribosyl-AMP cyclohydrolase CJ8421_RS07920 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJ8421_RS07925 PF14602 Hexapeptide repeat of succinyl-transferase CJ8421_RS07925 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CJ8421_RS07930 PF10609 NUBPL iron-transfer P-loop NTPase CJ8421_RS07930 PF01883 Iron-sulfur cluster assembly protein CJ8421_RS07935 PF02542 YgbB family CJ8421_RS07935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJ8421_RS07940 PF00486 Transcriptional regulatory protein, C terminal CJ8421_RS07940 PF00072 Response regulator receiver domain CJ8421_RS07945 PF01747 ATP-sulfurylase CJ8421_RS07945 PF14306 PUA-like domain CJ8421_RS07950 PF04608 Phosphatidylglycerophosphatase A CJ8421_RS07955 PF01649 Ribosomal protein S20 CJ8421_RS07960 PF00472 RF-1 domain CJ8421_RS07960 PF03462 PCRF domain CJ8421_RS07965 PF01243 Pyridoxamine 5'-phosphate oxidase CJ8421_RS07965 PF10615 Protein of unknown function (DUF2470) CJ8421_RS07970 PF00593 TonB dependent receptor CJ8421_RS07970 PF07715 TonB-dependent Receptor Plug Domain CJ8421_RS07975 PF01032 FecCD transport family CJ8421_RS07980 PF00005 ABC transporter CJ8421_RS07985 PF01497 Periplasmic binding protein CJ8421_RS07995 PF00083 Sugar (and other) transporter CJ8421_RS08000 PF00730 HhH-GPD superfamily base excision DNA repair protein CJ8421_RS08000 PF14815 NUDIX domain CJ8421_RS08030 PF01872 RibD C-terminal domain CJ8421_RS08030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJ8421_RS08040 PF03315 Serine dehydratase beta chain CJ8421_RS08040 PF03313 Serine dehydratase alpha chain CJ8421_RS08060 PF01618 MotA/TolQ/ExbB proton channel family CJ8421_RS08065 PF02472 Biopolymer transport protein ExbD/TolR CJ8421_RS08090 PF01264 Chorismate synthase CJ8421_RS08095 PF14622 Ribonuclease-III-like CJ8421_RS08095 PF00035 Double-stranded RNA binding motif CJ8421_RS08100 PF00075 RNase H CJ8421_RS08110 PF01807 CHC2 zinc finger CJ8421_RS08110 PF08275 DNA primase catalytic core, N-terminal domain CJ8421_RS08125 PF08245 Mur ligase middle domain CJ8421_RS08125 PF02875 Mur ligase family, glutamate ligase domain CJ8421_RS08130 PF02575 YbaB/EbfC DNA-binding family CJ8421_RS08140 PF00348 Polyprenyl synthetase CJ8421_RS08145 PF02780 Transketolase, C-terminal domain CJ8421_RS08145 PF02779 Transketolase, pyrimidine binding domain CJ8421_RS08145 PF00456 Transketolase, thiamine diphosphate binding domain CJ8421_RS08150 PF02405 Permease MlaE CJ8421_RS08155 PF00005 ABC transporter CJ8421_RS08165 PF02470 MlaD protein CJ8421_RS08165 PF03886 ABC-type transport auxiliary lipoprotein component CJ8421_RS08175 PF00557 Metallopeptidase family M24 CJ8421_RS08180 PF01177 Asp/Glu/Hydantoin racemase CJ8421_RS08185 PF00877 NlpC/P60 family CJ8421_RS08190 PF06965 Na+/H+ antiporter 1 CJ8421_RS08195 PF06965 Na+/H+ antiporter 1 CJ8421_RS08205 PF03239 Iron permease FTR1 family CJ8421_RS08210 PF10634 Fe2+ transport protein CJ8421_RS08230 PF00005 ABC transporter CJ8421_RS08360 PF01068 ATP dependent DNA ligase domain CJ8421_RS08360 PF14743 DNA ligase OB-like domain CJ8421_RS08375 PF03952 Enolase, N-terminal domain CJ8421_RS08375 PF00113 Enolase, C-terminal TIM barrel domain CJ8421_RS08380 PF00154 recA bacterial DNA recombination protein CJ8421_RS08385 PF02621 Menaquinone biosynthesis CJ8421_RS08390 PF01313 Bacterial export proteins, family 3 CJ8421_RS08395 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJ8421_RS08405 PF00459 Inositol monophosphatase family CJ8421_RS08410 PF00285 Citrate synthase, C-terminal domain CJ8421_RS08420 PF04055 Radical SAM superfamily CJ8421_RS08420 PF06968 Biotin and Thiamin Synthesis associated domain CJ8421_RS08425 PF01396 Topoisomerase DNA binding C4 zinc finger CJ8421_RS08425 PF01751 Toprim domain CJ8421_RS08425 PF01131 DNA topoisomerase CJ8421_RS08435 PF00344 SecY translocase CJ8421_RS08440 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJ8421_RS08445 PF03719 Ribosomal protein S5, C-terminal domain CJ8421_RS08445 PF00333 Ribosomal protein S5, N-terminal domain CJ8421_RS08450 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJ8421_RS08455 PF00347 Ribosomal protein L6 CJ8421_RS08460 PF00410 Ribosomal protein S8 CJ8421_RS08465 PF00253 Ribosomal protein S14p/S29e CJ8421_RS08470 PF00673 ribosomal L5P family C-terminus CJ8421_RS08470 PF00281 Ribosomal protein L5 CJ8421_RS08475 PF00467 KOW motif CJ8421_RS08475 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJ8421_RS08480 PF00238 Ribosomal protein L14p/L23e CJ8421_RS08485 PF00366 Ribosomal protein S17 CJ8421_RS08490 PF00831 Ribosomal L29 protein CJ8421_RS08495 PF00252 Ribosomal protein L16p/L10e CJ8421_RS08500 PF00189 Ribosomal protein S3, C-terminal domain CJ8421_RS08500 PF07650 KH domain CJ8421_RS08505 PF00237 Ribosomal protein L22p/L17e CJ8421_RS08510 PF00203 Ribosomal protein S19 CJ8421_RS08515 PF03947 Ribosomal Proteins L2, C-terminal domain CJ8421_RS08515 PF00181 Ribosomal Proteins L2, RNA binding domain CJ8421_RS08520 PF00276 Ribosomal protein L23 CJ8421_RS08525 PF00573 Ribosomal protein L4/L1 family CJ8421_RS08530 PF00297 Ribosomal protein L3 CJ8421_RS08535 PF00338 Ribosomal protein S10p/S20e CJ8421_RS08540 PF00849 RNA pseudouridylate synthase CJ8421_RS08540 PF01479 S4 domain CJ8421_RS08545 PF00753 Metallo-beta-lactamase superfamily CJ8421_RS08545 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJ8421_RS08545 PF17770 Ribonuclease J C-terminal domain CJ8421_RS08550 PF00398 Ribosomal RNA adenine dimethylase CJ8421_RS08560 PF04055 Radical SAM superfamily CJ8421_RS08595 PF00694 Aconitase C-terminal domain CJ8421_RS08600 PF00330 Aconitase family (aconitate hydratase) CJ8421_RS08605 PF00180 Isocitrate/isopropylmalate dehydrogenase CJ8421_RS08610 PF08502 LeuA allosteric (dimerisation) domain CJ8421_RS08610 PF00682 HMGL-like CJ8421_RS08625 PF14489 QueF-like protein CJ8421_RS08635 PF04204 Homoserine O-succinyltransferase CJ8421_RS08640 PF01053 Cys/Met metabolism PLP-dependent enzyme CJ8421_RS08650 PF07559 Flagellar basal body protein FlaE CJ8421_RS08650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJ8421_RS08650 PF07196 Flagellin hook IN motif CJ8421_RS08650 PF00460 Flagella basal body rod protein CJ8421_RS08655 PF02075 Crossover junction endodeoxyribonuclease RuvC