CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 442 3.0E-160 T 10-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 Gene3D G3DSA:3.60.20.10 2 245 8.0E-61 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 PIRSF PIRSF000485 1 445 6.2E-162 T 10-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 PANTHER PTHR11907 1 442 5.4E-205 T 10-11-2016 CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 Gene3D G3DSA:3.40.50.2020 258 424 8.7E-41 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 444 42.497 T 10-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 Pfam PF13537 Glutamine amidotransferase domain 72 199 2.8E-20 T 10-11-2016 IPR017932 Glutamine amidotransferase type 2 domain CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 Pfam PF00156 Phosphoribosyl transferase domain 258 377 1.5E-10 T 10-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 PANTHER PTHR11907:SF0 1 442 5.4E-205 T 10-11-2016 CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 SUPERFAMILY SSF56235 2 244 5.4E-63 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS00990 775f2d168791ad52621f8b28de7abce1 445 SUPERFAMILY SSF53271 238 443 9.96E-63 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS07695 3bd54b9d00d7bb658110be3f8ff96cd7 542 Pfam PF10111 Glycosyltransferase like family 2 5 281 5.2E-132 T 10-11-2016 IPR019290 Glycosyltransferase 2-like, prokaryotic type CJM129_RS07695 3bd54b9d00d7bb658110be3f8ff96cd7 542 SUPERFAMILY SSF53448 3 131 1.46E-17 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07695 3bd54b9d00d7bb658110be3f8ff96cd7 542 SUPERFAMILY SSF53448 163 230 1.46E-17 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07695 3bd54b9d00d7bb658110be3f8ff96cd7 542 Gene3D G3DSA:3.90.550.10 141 215 4.6E-28 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07695 3bd54b9d00d7bb658110be3f8ff96cd7 542 Gene3D G3DSA:3.90.550.10 248 287 4.6E-28 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07695 3bd54b9d00d7bb658110be3f8ff96cd7 542 Gene3D G3DSA:3.90.550.10 4 106 4.6E-28 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 252 270 1.2E-83 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 208 231 1.2E-83 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 234 251 1.2E-83 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 304 317 1.2E-83 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 66 88 1.2E-83 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 89 113 1.2E-83 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 276 302 1.2E-83 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 135 158 1.2E-83 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 180 204 1.2E-83 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 35 58 1.0E-5 T 10-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PANTHER PTHR30013:SF7 21 379 2.9E-174 T 10-11-2016 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 247 329 2.8E-32 T 10-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 81 227 2.3E-29 T 10-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 23 376 5.3E-164 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PIRSF PIRSF000310 24 379 3.3E-141 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 PANTHER PTHR30013 21 379 2.9E-174 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 Gene3D G3DSA:4.10.480.10 247 331 3.1E-39 T 10-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 Gene3D G3DSA:3.40.50.700 69 245 6.0E-53 T 10-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CJM129_RS06585 2a2a0c39123f48e889eeb8aae607d0db 379 SUPERFAMILY SSF56770 69 331 1.7E-88 T 10-11-2016 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 Gene3D G3DSA:3.30.420.40 1 202 2.1E-14 T 10-11-2016 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 TIGRFAM TIGR00016 ackA: acetate kinase 1 387 4.8E-149 T 10-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 PANTHER PTHR21060:SF11 1 393 4.8E-187 T 10-11-2016 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 PRINTS PR00471 Acetate kinase family signature 171 184 2.7E-45 T 10-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 PRINTS PR00471 Acetate kinase family signature 3 14 2.7E-45 T 10-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 PRINTS PR00471 Acetate kinase family signature 297 310 2.7E-45 T 10-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 PRINTS PR00471 Acetate kinase family signature 374 386 2.7E-45 T 10-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 PRINTS PR00471 Acetate kinase family signature 201 222 2.7E-45 T 10-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 PRINTS PR00471 Acetate kinase family signature 319 335 2.7E-45 T 10-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 Hamap MF_00020 Acetate kinase [ackA]. 1 396 172.385 T 10-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 PANTHER PTHR21060 1 393 4.8E-187 T 10-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 Pfam PF00871 Acetokinase family 2 387 4.1E-145 T 10-11-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 SUPERFAMILY SSF53067 1 193 2.91E-59 T 10-11-2016 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 SUPERFAMILY SSF53067 155 392 2.22E-92 T 10-11-2016 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 PIRSF PIRSF000722 1 396 1.0E-150 T 10-11-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 Gene3D G3DSA:3.30.420.40 203 391 3.9E-81 T 10-11-2016 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 201 218 - T 10-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS03325 df3aec9c5e3799726649db997857b20c 396 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 10-11-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 PANTHER PTHR30627 52 140 4.8E-95 T 10-11-2016 CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 PANTHER PTHR30627 159 587 4.8E-95 T 10-11-2016 CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 Gene3D G3DSA:3.40.710.10 257 583 1.2E-70 T 10-11-2016 IPR012338 Beta-lactamase/transpeptidase-like CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 Pfam PF00905 Penicillin binding protein transpeptidase domain 277 580 3.7E-62 T 10-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 SUPERFAMILY SSF56519 49 249 1.57E-25 T 10-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 SUPERFAMILY SSF56601 199 586 1.73E-70 T 10-11-2016 IPR012338 Beta-lactamase/transpeptidase-like CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 PANTHER PTHR30627:SF1 52 140 4.8E-95 T 10-11-2016 CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 PANTHER PTHR30627:SF1 159 587 4.8E-95 T 10-11-2016 CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 Gene3D G3DSA:3.90.1310.10 164 256 5.9E-13 T 10-11-2016 CJM129_RS02510 f10bdd7610832fa0176377beebcf0885 602 Pfam PF03717 Penicillin-binding Protein dimerisation domain 50 234 1.8E-28 T 10-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PANTHER PTHR32063 1 1041 0.0 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 Gene3D G3DSA:3.30.70.1430 568 669 4.0E-19 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 SUPERFAMILY SSF82693 41 135 2.62E-25 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PANTHER PTHR32063:SF27 1 1041 0.0 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 SUPERFAMILY SSF82866 299 502 1.44E-50 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1029 0.0 T 10-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 Gene3D G3DSA:1.10.3850.10 812 1027 7.0E-58 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 Gene3D G3DSA:1.10.3850.10 283 503 4.7E-61 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 SUPERFAMILY SSF82714 185 275 7.06E-20 T 10-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 SUPERFAMILY SSF82693 566 669 3.84E-20 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 SUPERFAMILY SSF82714 720 805 1.06E-19 T 10-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 SUPERFAMILY SSF82866 805 1031 5.75E-47 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 SUPERFAMILY SSF82693 277 333 1.44E-25 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 SUPERFAMILY SSF82693 141 184 1.44E-25 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 Gene3D G3DSA:3.30.2090.10 720 808 1.3E-21 T 10-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 Gene3D G3DSA:3.30.2090.10 184 278 7.5E-26 T 10-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 Pfam PF00873 AcrB/AcrD/AcrF family 3 1025 0.0 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 Gene3D G3DSA:3.30.70.1430 41 139 1.9E-30 T 10-11-2016 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.7E-95 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.7E-95 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.7E-95 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 474 497 2.7E-95 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.7E-95 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.7E-95 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.7E-95 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 449 472 2.7E-95 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS01745 a99b7b3b835a7d595cc9b0703b5d802d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.7E-95 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 SMART SM00283 141 358 9.1E-21 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 Gene3D G3DSA:1.10.287.950 165 339 2.4E-48 T 10-11-2016 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 211 336 3.6E-36 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 SUPERFAMILY SSF58104 157 340 1.31E-51 T 10-11-2016 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 SUPERFAMILY SSF58104 80 103 1.31E-51 T 10-11-2016 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 172 201 4.7E-6 T 10-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 300 4.7E-6 T 10-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 PANTHER PTHR32089 14 104 4.8E-47 T 10-11-2016 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 PANTHER PTHR32089 130 337 4.8E-47 T 10-11-2016 CJM129_RS06200 be0754f3497401a1fac19b339eeb8233 459 PANTHER PTHR32089 443 453 4.8E-47 T 10-11-2016 CJM129_RS02845 4e4afa51d2e0bdd0a8520ec8e986943a 253 SUPERFAMILY SSF55174 1 41 3.06E-5 T 10-11-2016 CJM129_RS02845 4e4afa51d2e0bdd0a8520ec8e986943a 253 SUPERFAMILY SSF53335 72 178 5.99E-18 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS02845 4e4afa51d2e0bdd0a8520ec8e986943a 253 PANTHER PTHR32319:SF0 73 249 3.2E-51 T 10-11-2016 CJM129_RS02845 4e4afa51d2e0bdd0a8520ec8e986943a 253 PANTHER PTHR32319 73 249 3.2E-51 T 10-11-2016 CJM129_RS02845 4e4afa51d2e0bdd0a8520ec8e986943a 253 Pfam PF01728 FtsJ-like methyltransferase 73 248 1.5E-17 T 10-11-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CJM129_RS02845 4e4afa51d2e0bdd0a8520ec8e986943a 253 Gene3D G3DSA:3.40.50.150 73 165 9.0E-10 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS02845 4e4afa51d2e0bdd0a8520ec8e986943a 253 Gene3D G3DSA:3.10.290.10 1 41 7.2E-8 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS05950 9dc005c574950cdf1ea3c348f73b91cf 297 Pfam PF00535 Glycosyl transferase family 2 5 144 2.9E-32 T 10-11-2016 IPR001173 Glycosyltransferase 2-like CJM129_RS05950 9dc005c574950cdf1ea3c348f73b91cf 297 Gene3D G3DSA:3.90.550.10 2 204 1.7E-53 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05950 9dc005c574950cdf1ea3c348f73b91cf 297 PANTHER PTHR22916 1 297 4.6E-43 T 10-11-2016 CJM129_RS05950 9dc005c574950cdf1ea3c348f73b91cf 297 SUPERFAMILY SSF53448 3 229 2.03E-54 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 228 244 - T 10-11-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 PRINTS PR00151 Porphobilinogen deaminase signature 120 137 6.4E-44 T 10-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 PRINTS PR00151 Porphobilinogen deaminase signature 139 156 6.4E-44 T 10-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 PRINTS PR00151 Porphobilinogen deaminase signature 227 244 6.4E-44 T 10-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 PRINTS PR00151 Porphobilinogen deaminase signature 72 91 6.4E-44 T 10-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 PRINTS PR00151 Porphobilinogen deaminase signature 41 61 6.4E-44 T 10-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 PIRSF PIRSF001438 1 307 1.3E-105 T 10-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 Gene3D G3DSA:3.40.190.10 2 106 8.6E-39 T 10-11-2016 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 Gene3D G3DSA:3.40.190.10 107 197 2.0E-32 T 10-11-2016 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 292 1.6E-13 T 10-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 PANTHER PTHR11557 1 307 3.9E-116 T 10-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 294 36.139 T 10-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 3 294 2.6E-97 T 10-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 3 208 5.1E-67 T 10-11-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 Gene3D G3DSA:3.30.160.40 218 302 8.5E-21 T 10-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 SUPERFAMILY SSF54782 217 302 5.23E-22 T 10-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS02610 f2f63a6aec300a8441d3877bfd54137e 307 SUPERFAMILY SSF53850 1 214 1.52E-70 T 10-11-2016 CJM129_RS02970 defdb95be8cafed5ea443922fa74f7f3 331 Pfam PF12849 PBP superfamily domain 21 279 1.4E-32 T 10-11-2016 IPR024370 PBP domain CJM129_RS02970 defdb95be8cafed5ea443922fa74f7f3 331 PANTHER PTHR30570:SF1 18 319 2.2E-35 T 10-11-2016 CJM129_RS02970 defdb95be8cafed5ea443922fa74f7f3 331 SUPERFAMILY SSF53850 12 314 5.98E-61 T 10-11-2016 CJM129_RS02970 defdb95be8cafed5ea443922fa74f7f3 331 Gene3D G3DSA:3.40.190.10 158 275 2.3E-4 T 10-11-2016 CJM129_RS02970 defdb95be8cafed5ea443922fa74f7f3 331 PANTHER PTHR30570 18 319 2.2E-35 T 10-11-2016 CJM129_RS02970 defdb95be8cafed5ea443922fa74f7f3 331 Gene3D G3DSA:3.40.190.10 22 157 3.3E-32 T 10-11-2016 CJM129_RS08370 59ea5d0b8cb3a47f866ebfba5f4a2996 262 PANTHER PTHR30465 3 262 4.2E-38 T 10-11-2016 CJM129_RS08370 59ea5d0b8cb3a47f866ebfba5f4a2996 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 255 1.6E-16 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS08370 59ea5d0b8cb3a47f866ebfba5f4a2996 262 Gene3D G3DSA:1.10.3720.10 57 257 1.4E-15 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS08370 59ea5d0b8cb3a47f866ebfba5f4a2996 262 SUPERFAMILY SSF161098 59 243 1.7E-15 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS06005 d82c332a8c04e85a5f46a9f4806d8eae 317 Gene3D G3DSA:3.90.25.10 178 287 1.3E-26 T 10-11-2016 CJM129_RS06005 d82c332a8c04e85a5f46a9f4806d8eae 317 Gene3D G3DSA:3.40.50.720 1 177 1.8E-33 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06005 d82c332a8c04e85a5f46a9f4806d8eae 317 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 4 309 6.4E-105 T 10-11-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 CJM129_RS06005 d82c332a8c04e85a5f46a9f4806d8eae 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 6.2E-38 T 10-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CJM129_RS06005 d82c332a8c04e85a5f46a9f4806d8eae 317 PANTHER PTHR10366:SF469 2 313 1.4E-60 T 10-11-2016 CJM129_RS06005 d82c332a8c04e85a5f46a9f4806d8eae 317 SUPERFAMILY SSF51735 1 311 4.87E-58 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06005 d82c332a8c04e85a5f46a9f4806d8eae 317 PANTHER PTHR10366 2 313 1.4E-60 T 10-11-2016 CJM129_RS06015 9112a17c4aa0f174f86fc4a8c516d23c 100 SUPERFAMILY SSF46626 6 99 1.55E-14 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS06015 9112a17c4aa0f174f86fc4a8c516d23c 100 Gene3D G3DSA:1.10.760.10 6 100 3.0E-13 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS06015 9112a17c4aa0f174f86fc4a8c516d23c 100 Pfam PF00034 Cytochrome c 19 100 1.8E-8 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PANTHER PTHR24093:SF50 31 783 7.4E-159 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 SUPERFAMILY SSF81665 728 766 4.58E-17 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 SUPERFAMILY SSF81665 258 296 4.58E-17 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 SUPERFAMILY SSF81665 393 487 4.58E-17 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 Pfam PF00403 Heavy-metal-associated domain 81 140 1.5E-7 T 10-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 213 782 7.7E-134 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 Pfam PF00122 E1-E2 ATPase 263 484 8.3E-59 T 10-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 Pfam PF00702 haloacid dehalogenase-like hydrolase 490 692 7.8E-30 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 264 764 2.2E-73 T 10-11-2016 IPR001757 P-type ATPase GO:0016021 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 Gene3D G3DSA:2.70.150.10 242 393 1.5E-22 T 10-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00942 Copper-transporting ATPase 1 signature 194 214 2.4E-7 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00942 Copper-transporting ATPase 1 signature 214 239 2.4E-7 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00942 Copper-transporting ATPase 1 signature 100 121 2.4E-7 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 Gene3D G3DSA:3.40.50.1000 600 747 2.7E-38 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 Gene3D G3DSA:3.40.50.1000 466 509 2.7E-38 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 231 780 1.5E-144 T 10-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 SUPERFAMILY SSF56784 492 511 1.13E-42 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 SUPERFAMILY SSF56784 548 779 1.13E-42 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 702 714 1.4E-11 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 493 507 1.4E-11 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 679 698 1.4E-11 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 342 356 1.4E-11 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00943 Copper-transporting ATPase signature 262 281 1.2E-11 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00943 Copper-transporting ATPase signature 713 727 1.2E-11 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00943 Copper-transporting ATPase signature 415 429 1.2E-11 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00943 Copper-transporting ATPase signature 657 674 1.2E-11 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PRINTS PR00943 Copper-transporting ATPase signature 121 141 1.2E-11 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 SUPERFAMILY SSF55008 73 146 7.46E-16 T 10-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 PANTHER PTHR24093 31 783 7.4E-159 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 Gene3D G3DSA:3.30.70.100 76 144 3.0E-14 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 SUPERFAMILY SSF81653 297 391 2.35E-16 T 10-11-2016 CJM129_RS06025 913b5ce51cef1d7b786fb511cd24881b 783 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 2 66 2.5E-11 T 10-11-2016 IPR021993 Putative metal-binding domain of cation transport ATPase CJM129_RS04210 eb1c4cb173262d4260c732d0b6b2a10b 125 PANTHER PTHR35008 1 115 7.9E-25 T 10-11-2016 CJM129_RS04210 eb1c4cb173262d4260c732d0b6b2a10b 125 SUPERFAMILY SSF46626 2 80 4.38E-14 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS04210 eb1c4cb173262d4260c732d0b6b2a10b 125 Gene3D G3DSA:1.10.760.10 2 80 1.1E-10 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS04210 eb1c4cb173262d4260c732d0b6b2a10b 125 PANTHER PTHR35008:SF4 1 115 7.9E-25 T 10-11-2016 CJM129_RS04210 eb1c4cb173262d4260c732d0b6b2a10b 125 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 3 75 2.1E-6 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 Pfam PF01687 Riboflavin kinase 157 278 1.5E-24 T 10-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 PIRSF PIRSF004491 2 284 2.3E-54 T 10-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 PANTHER PTHR22749:SF0 16 284 9.9E-38 T 10-11-2016 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 Gene3D G3DSA:2.40.30.30 159 281 1.2E-27 T 10-11-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 Gene3D G3DSA:3.40.50.620 10 158 8.1E-23 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 Pfam PF06574 FAD synthetase 64 136 1.9E-5 T 10-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 Pfam PF06574 FAD synthetase 14 37 6.4E-5 T 10-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 SUPERFAMILY SSF82114 149 280 4.58E-31 T 10-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 SUPERFAMILY SSF52374 17 159 8.59E-14 T 10-11-2016 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 PANTHER PTHR22749 16 284 9.9E-38 T 10-11-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 CJM129_RS02850 cb822161d086c0c14d3527897c88c03d 284 SMART SM00904 156 279 9.1E-37 T 10-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 CJM129_RS04470 248b0dcbbce98a7571228047a9124aa6 182 SUPERFAMILY SSF53271 12 173 1.23E-47 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS04470 248b0dcbbce98a7571228047a9124aa6 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 12 182 34.505 T 10-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 CJM129_RS04470 248b0dcbbce98a7571228047a9124aa6 182 PANTHER PTHR32315 1 181 3.8E-70 T 10-11-2016 CJM129_RS04470 248b0dcbbce98a7571228047a9124aa6 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 13 181 1.3E-72 T 10-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 CJM129_RS04470 248b0dcbbce98a7571228047a9124aa6 182 Gene3D G3DSA:3.40.50.2020 7 181 4.7E-62 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS04470 248b0dcbbce98a7571228047a9124aa6 182 Pfam PF00156 Phosphoribosyl transferase domain 33 179 3.5E-15 T 10-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 SUPERFAMILY SSF55957 360 450 2.44E-19 T 10-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 PANTHER PTHR22573:SF28 3 456 3.0E-118 T 10-11-2016 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 116 4.6E-30 T 10-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 SUPERFAMILY SSF53738 152 254 1.92E-23 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 9.6E-19 T 10-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 203 216 9.6E-19 T 10-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 9.6E-19 T 10-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 169 188 9.6E-19 T 10-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 Gene3D G3DSA:3.40.120.10 252 360 4.5E-29 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 SUPERFAMILY SSF53738 257 351 1.29E-20 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 Gene3D G3DSA:3.40.120.10 173 248 1.2E-23 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 SUPERFAMILY SSF53738 3 176 1.33E-33 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 249 4.5E-18 T 10-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 PANTHER PTHR22573 3 456 3.0E-118 T 10-11-2016 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 362 3.3E-17 T 10-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 366 445 1.4E-12 T 10-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 Gene3D G3DSA:3.30.310.50 362 451 1.2E-23 T 10-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS07520 1416b6a3b75ec1475e48c68abc08c693 456 Gene3D G3DSA:3.40.120.10 3 124 1.1E-32 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS08365 a2be4282fc0a2bfccbd4d38808398f6d 236 SUPERFAMILY SSF52540 1 220 1.51E-41 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08365 a2be4282fc0a2bfccbd4d38808398f6d 236 SMART SM00382 25 221 3.8E-11 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS08365 a2be4282fc0a2bfccbd4d38808398f6d 236 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 29 42 - T 10-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJM129_RS08365 a2be4282fc0a2bfccbd4d38808398f6d 236 PANTHER PTHR24220 2 219 6.6E-50 T 10-11-2016 CJM129_RS08365 a2be4282fc0a2bfccbd4d38808398f6d 236 Gene3D G3DSA:3.40.50.300 1 219 4.3E-47 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08365 a2be4282fc0a2bfccbd4d38808398f6d 236 Pfam PF00005 ABC transporter 16 174 4.0E-21 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS08365 a2be4282fc0a2bfccbd4d38808398f6d 236 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS05475 e024c6021feb2366980548fbd000bce6 296 PANTHER PTHR11019 203 293 2.9E-14 T 10-11-2016 CJM129_RS05475 e024c6021feb2366980548fbd000bce6 296 SUPERFAMILY SSF46689 239 287 4.48E-10 T 10-11-2016 IPR009057 Homeodomain-like GO:0003677 CJM129_RS05475 e024c6021feb2366980548fbd000bce6 296 SMART SM00342 202 285 1.5E-17 T 10-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJM129_RS05475 e024c6021feb2366980548fbd000bce6 296 Pfam PF12833 Helix-turn-helix domain 213 286 4.7E-16 T 10-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJM129_RS05475 e024c6021feb2366980548fbd000bce6 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 281 - T 10-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CJM129_RS05475 e024c6021feb2366980548fbd000bce6 296 Gene3D G3DSA:1.10.10.60 203 239 2.3E-5 T 10-11-2016 IPR009057 Homeodomain-like GO:0003677 CJM129_RS05475 e024c6021feb2366980548fbd000bce6 296 Gene3D G3DSA:1.10.10.60 240 287 3.0E-14 T 10-11-2016 IPR009057 Homeodomain-like GO:0003677 CJM129_RS06895 db7d29f70295ef78344e00eeeac276fb 144 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 29 135 2.3E-15 T 10-11-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 CJM129_RS06895 db7d29f70295ef78344e00eeeac276fb 144 SUPERFAMILY SSF50118 25 134 4.58E-18 T 10-11-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CJM129_RS06895 db7d29f70295ef78344e00eeeac276fb 144 Gene3D G3DSA:2.30.30.110 23 135 4.4E-20 T 10-11-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CJM129_RS05920 cbb2702f3c852e41b01a2ee9cfeb0f36 264 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 49 255 1.4E-72 T 10-11-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like CJM129_RS05920 cbb2702f3c852e41b01a2ee9cfeb0f36 264 SUPERFAMILY SSF53098 26 218 2.05E-38 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS05920 cbb2702f3c852e41b01a2ee9cfeb0f36 264 Gene3D G3DSA:3.30.420.10 8 212 2.6E-28 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS05980 9104856e1f666329f58bb3c2a93f3e7d 249 Gene3D G3DSA:2.160.10.10 32 182 3.0E-35 T 10-11-2016 CJM129_RS05980 9104856e1f666329f58bb3c2a93f3e7d 249 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 141 1.9E-5 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS05980 9104856e1f666329f58bb3c2a93f3e7d 249 SUPERFAMILY SSF51161 21 199 7.07E-32 T 10-11-2016 IPR011004 Trimeric LpxA-like CJM129_RS05980 9104856e1f666329f58bb3c2a93f3e7d 249 PANTHER PTHR23416:SF61 97 207 4.4E-28 T 10-11-2016 CJM129_RS05980 9104856e1f666329f58bb3c2a93f3e7d 249 PANTHER PTHR23416:SF61 42 68 4.4E-28 T 10-11-2016 CJM129_RS05980 9104856e1f666329f58bb3c2a93f3e7d 249 PANTHER PTHR23416 97 207 4.4E-28 T 10-11-2016 CJM129_RS05980 9104856e1f666329f58bb3c2a93f3e7d 249 PANTHER PTHR23416 42 68 4.4E-28 T 10-11-2016 CJM129_RS02360 fa1b00db13bef96674a45571cfc16bf9 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 6.9E-63 T 10-11-2016 IPR023798 Ribosomal protein S7 domain CJM129_RS02360 fa1b00db13bef96674a45571cfc16bf9 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 156 3.2E-68 T 10-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CJM129_RS02360 fa1b00db13bef96674a45571cfc16bf9 156 PANTHER PTHR11205 1 156 1.2E-83 T 10-11-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CJM129_RS02360 fa1b00db13bef96674a45571cfc16bf9 156 SUPERFAMILY SSF47973 2 152 6.02E-57 T 10-11-2016 IPR023798 Ribosomal protein S7 domain CJM129_RS02360 fa1b00db13bef96674a45571cfc16bf9 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.89 T 10-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CJM129_RS02360 fa1b00db13bef96674a45571cfc16bf9 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 10-11-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 CJM129_RS02360 fa1b00db13bef96674a45571cfc16bf9 156 Gene3D G3DSA:1.10.455.10 6 156 1.0E-63 T 10-11-2016 IPR023798 Ribosomal protein S7 domain CJM129_RS02360 fa1b00db13bef96674a45571cfc16bf9 156 PIRSF PIRSF002122 3 156 3.5E-57 T 10-11-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 CJM129_RS01415 5f7b8da8424b6123414be541637824c6 274 Pfam PF02548 Ketopantoate hydroxymethyltransferase 5 258 3.7E-106 T 10-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CJM129_RS01415 5f7b8da8424b6123414be541637824c6 274 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 262 41.723 T 10-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CJM129_RS01415 5f7b8da8424b6123414be541637824c6 274 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 5.2E-102 T 10-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CJM129_RS01415 5f7b8da8424b6123414be541637824c6 274 PANTHER PTHR20881 2 269 1.6E-141 T 10-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CJM129_RS01415 5f7b8da8424b6123414be541637824c6 274 Gene3D G3DSA:3.20.20.60 3 262 2.0E-110 T 10-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJM129_RS01415 5f7b8da8424b6123414be541637824c6 274 PIRSF PIRSF000388 1 265 6.8E-107 T 10-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 CJM129_RS01415 5f7b8da8424b6123414be541637824c6 274 SUPERFAMILY SSF51621 3 262 5.83E-100 T 10-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJM129_RS08955 8dd6f546eb5f8d6f9b9efd32b7eb9407 89 PANTHER PTHR34040:SF2 1 89 1.4E-33 T 10-11-2016 CJM129_RS08955 8dd6f546eb5f8d6f9b9efd32b7eb9407 89 PANTHER PTHR34040 1 89 1.4E-33 T 10-11-2016 CJM129_RS08955 8dd6f546eb5f8d6f9b9efd32b7eb9407 89 PIRSF PIRSF004669 1 89 3.7E-31 T 10-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJM129_RS08955 8dd6f546eb5f8d6f9b9efd32b7eb9407 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.4E-21 T 10-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJM129_RS08955 8dd6f546eb5f8d6f9b9efd32b7eb9407 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.4E-21 T 10-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJM129_RS08955 8dd6f546eb5f8d6f9b9efd32b7eb9407 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.4E-21 T 10-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJM129_RS08955 8dd6f546eb5f8d6f9b9efd32b7eb9407 89 Pfam PF01313 Bacterial export proteins, family 3 7 77 8.7E-28 T 10-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJM129_RS08955 8dd6f546eb5f8d6f9b9efd32b7eb9407 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 1.5E-33 T 10-11-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CJM129_RS01135 1b3f5f464ee437bf8934b3c367ffaab8 185 SUPERFAMILY SSF55194 3 184 4.71E-66 T 10-11-2016 IPR023584 Ribosome recycling factor domain CJM129_RS01135 1b3f5f464ee437bf8934b3c367ffaab8 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.616 T 10-11-2016 IPR002661 Ribosome recycling factor GO:0006412 CJM129_RS01135 1b3f5f464ee437bf8934b3c367ffaab8 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.1E-73 T 10-11-2016 IPR002661 Ribosome recycling factor GO:0006412 CJM129_RS01135 1b3f5f464ee437bf8934b3c367ffaab8 185 Gene3D G3DSA:1.10.132.20 66 185 9.4E-42 T 10-11-2016 IPR023584 Ribosome recycling factor domain CJM129_RS01135 1b3f5f464ee437bf8934b3c367ffaab8 185 PANTHER PTHR20982 1 185 1.1E-69 T 10-11-2016 IPR002661 Ribosome recycling factor GO:0006412 CJM129_RS01135 1b3f5f464ee437bf8934b3c367ffaab8 185 Pfam PF01765 Ribosome recycling factor 20 183 2.1E-61 T 10-11-2016 IPR023584 Ribosome recycling factor domain CJM129_RS01690 adf9335970c222576ee3027b67ef34ed 81 Gene3D G3DSA:3.30.70.20 5 73 2.1E-14 T 10-11-2016 CJM129_RS01690 adf9335970c222576ee3027b67ef34ed 81 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS01690 adf9335970c222576ee3027b67ef34ed 81 PANTHER PTHR24960 1 77 7.3E-13 T 10-11-2016 CJM129_RS01690 adf9335970c222576ee3027b67ef34ed 81 PANTHER PTHR24960:SF38 1 77 7.3E-13 T 10-11-2016 CJM129_RS01690 adf9335970c222576ee3027b67ef34ed 81 SUPERFAMILY SSF54862 5 74 2.09E-15 T 10-11-2016 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 PIRSF PIRSF000774 1 412 2.5E-69 T 10-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 Pfam PF04963 Sigma-54 factor, core binding domain 81 249 2.0E-30 T 10-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 409 2.3E-95 T 10-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 3 47 1.7E-11 T 10-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 PRINTS PR00045 Sigma-54 factor signature 146 163 2.8E-14 T 10-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 PRINTS PR00045 Sigma-54 factor signature 312 324 2.8E-14 T 10-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 PRINTS PR00045 Sigma-54 factor signature 385 403 2.8E-14 T 10-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 PRINTS PR00045 Sigma-54 factor signature 328 339 2.8E-14 T 10-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 390 397 - T 10-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 PANTHER PTHR32248 1 412 1.2E-61 T 10-11-2016 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 PANTHER PTHR32248:SF4 1 412 1.2E-61 T 10-11-2016 CJM129_RS03240 5f257a14815c8f83a9b466fbb91cc4ca 416 Pfam PF04552 Sigma-54, DNA binding domain 256 410 1.6E-46 T 10-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding CJM129_RS07825 1688d24125ea1d029911438866eb8c6f 393 PANTHER PTHR30012:SF0 2 391 1.2E-67 T 10-11-2016 CJM129_RS07825 1688d24125ea1d029911438866eb8c6f 393 PRINTS PR00812 Bacterial general secretion pathway protein F signature 56 68 1.6E-11 T 10-11-2016 IPR003004 GspF/PilC family CJM129_RS07825 1688d24125ea1d029911438866eb8c6f 393 PRINTS PR00812 Bacterial general secretion pathway protein F signature 151 179 1.6E-11 T 10-11-2016 IPR003004 GspF/PilC family CJM129_RS07825 1688d24125ea1d029911438866eb8c6f 393 PRINTS PR00812 Bacterial general secretion pathway protein F signature 355 369 1.6E-11 T 10-11-2016 IPR003004 GspF/PilC family CJM129_RS07825 1688d24125ea1d029911438866eb8c6f 393 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 390 1.6E-11 T 10-11-2016 IPR003004 GspF/PilC family CJM129_RS07825 1688d24125ea1d029911438866eb8c6f 393 Pfam PF00482 Type II secretion system (T2SS), protein F 60 179 3.0E-13 T 10-11-2016 IPR018076 Type II secretion system F domain CJM129_RS07825 1688d24125ea1d029911438866eb8c6f 393 Pfam PF00482 Type II secretion system (T2SS), protein F 262 382 1.5E-18 T 10-11-2016 IPR018076 Type II secretion system F domain CJM129_RS07825 1688d24125ea1d029911438866eb8c6f 393 PANTHER PTHR30012 2 391 1.2E-67 T 10-11-2016 CJM129_RS09365 1eb364e0afa47651efd1bc81aaf4d72e 220 PANTHER PTHR11820 1 220 6.7E-55 T 10-11-2016 CJM129_RS09365 1eb364e0afa47651efd1bc81aaf4d72e 220 PANTHER PTHR11820:SF6 1 220 6.7E-55 T 10-11-2016 CJM129_RS09365 1eb364e0afa47651efd1bc81aaf4d72e 220 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 53 219 4.6E-38 T 10-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJM129_RS09365 1eb364e0afa47651efd1bc81aaf4d72e 220 Gene3D G3DSA:3.90.850.10 45 219 2.2E-49 T 10-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJM129_RS09365 1eb364e0afa47651efd1bc81aaf4d72e 220 SUPERFAMILY SSF56529 44 219 8.5E-44 T 10-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJM129_RS03170 f16268b1bb0095fc3e2231b8b5861bcf 140 PANTHER PTHR11654:SF119 1 108 4.9E-17 T 10-11-2016 CJM129_RS03170 f16268b1bb0095fc3e2231b8b5861bcf 140 Pfam PF00854 POT family 7 107 1.5E-13 T 10-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS03170 f16268b1bb0095fc3e2231b8b5861bcf 140 PANTHER PTHR11654 1 108 4.9E-17 T 10-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS03170 f16268b1bb0095fc3e2231b8b5861bcf 140 Gene3D G3DSA:1.20.1250.20 17 133 1.5E-6 T 10-11-2016 CJM129_RS03170 f16268b1bb0095fc3e2231b8b5861bcf 140 SUPERFAMILY SSF103473 17 137 1.96E-8 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 Gene3D G3DSA:3.40.30.10 2 103 3.5E-38 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 10-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 SUPERFAMILY SSF52833 2 104 5.52E-38 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 PRINTS PR00421 Thioredoxin family signature 20 28 3.5E-10 T 10-11-2016 CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 PRINTS PR00421 Thioredoxin family signature 28 37 3.5E-10 T 10-11-2016 CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 PRINTS PR00421 Thioredoxin family signature 68 79 3.5E-10 T 10-11-2016 CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 12 102 3.4E-37 T 10-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 PANTHER PTHR10438 10 104 2.5E-36 T 10-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 PIRSF PIRSF000077 1 104 2.0E-38 T 10-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CJM129_RS00745 3bb3a8ded372400a5bcf16177a550680 104 Pfam PF00085 Thioredoxin 7 101 4.5E-31 T 10-11-2016 IPR013766 Thioredoxin domain GO:0045454 CJM129_RS03720 59309bda768ae7804816a85727332b15 187 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 186 29.722 T 10-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 CJM129_RS03720 59309bda768ae7804816a85727332b15 187 Gene3D G3DSA:3.40.50.1950 1 186 3.0E-70 T 10-11-2016 IPR003382 Flavoprotein GO:0003824 CJM129_RS03720 59309bda768ae7804816a85727332b15 187 SUPERFAMILY SSF52507 1 186 4.32E-47 T 10-11-2016 IPR003382 Flavoprotein GO:0003824 CJM129_RS03720 59309bda768ae7804816a85727332b15 187 Pfam PF02441 Flavoprotein 1 127 2.3E-24 T 10-11-2016 IPR003382 Flavoprotein GO:0003824 CJM129_RS03720 59309bda768ae7804816a85727332b15 187 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 184 8.7E-46 T 10-11-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 CJM129_RS03720 59309bda768ae7804816a85727332b15 187 PANTHER PTHR30108:SF2 1 186 1.8E-51 T 10-11-2016 CJM129_RS03720 59309bda768ae7804816a85727332b15 187 PANTHER PTHR30108 1 186 1.8E-51 T 10-11-2016 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 89.4 T 10-11-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 PANTHER PTHR11444:SF1 1 462 2.7E-242 T 10-11-2016 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 Gene3D G3DSA:1.10.275.10 1 137 7.1E-63 T 10-11-2016 IPR024083 Fumarase/histidase, N-terminal CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 1.4E-5 T 10-11-2016 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 1.4E-5 T 10-11-2016 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 1.4E-5 T 10-11-2016 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 4.3E-31 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 4.3E-31 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 4.3E-31 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 4.3E-31 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 Pfam PF00206 Lyase 11 341 6.2E-115 T 10-11-2016 IPR022761 Fumarate lyase, N-terminal CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 SUPERFAMILY SSF48557 3 461 9.27E-156 T 10-11-2016 IPR008948 L-Aspartase-like GO:0003824 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 Gene3D G3DSA:1.20.200.10 138 415 1.0E-101 T 10-11-2016 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 PANTHER PTHR11444 1 462 2.7E-242 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 Pfam PF10415 Fumarase C C-terminus 407 460 3.1E-24 T 10-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 10-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 460 1.5E-244 T 10-11-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS07330 e7910c0c12bedaa9b5c1f1b8581bb7b5 463 Gene3D G3DSA:1.10.40.30 416 462 1.4E-30 T 10-11-2016 CJM129_RS05675 dd3d4de515aab01125337e8c8d868f6b 270 PANTHER PTHR20858 1 266 1.0E-111 T 10-11-2016 CJM129_RS05675 dd3d4de515aab01125337e8c8d868f6b 270 SUPERFAMILY SSF53613 11 265 5.14E-76 T 10-11-2016 IPR029056 Ribokinase-like CJM129_RS05675 dd3d4de515aab01125337e8c8d868f6b 270 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 11 263 3.2E-112 T 10-11-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CJM129_RS05675 dd3d4de515aab01125337e8c8d868f6b 270 Pfam PF08543 Phosphomethylpyrimidine kinase 18 261 3.6E-93 T 10-11-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 CJM129_RS05675 dd3d4de515aab01125337e8c8d868f6b 270 Gene3D G3DSA:3.40.1190.20 11 263 1.6E-96 T 10-11-2016 IPR029056 Ribokinase-like CJM129_RS05675 dd3d4de515aab01125337e8c8d868f6b 270 PANTHER PTHR20858:SF17 1 266 1.0E-111 T 10-11-2016 CJM129_RS08710 2ea84a868734894cf384d31a90b63097 369 PANTHER PTHR30188:SF3 28 363 3.3E-99 T 10-11-2016 CJM129_RS08710 2ea84a868734894cf384d31a90b63097 369 PANTHER PTHR30188 28 363 3.3E-99 T 10-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CJM129_RS08710 2ea84a868734894cf384d31a90b63097 369 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 112 365 1.1E-79 T 10-11-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CJM129_RS08710 2ea84a868734894cf384d31a90b63097 369 Pfam PF02405 Permease MlaE 153 363 1.3E-68 T 10-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CJM129_RS08710 2ea84a868734894cf384d31a90b63097 369 Gene3D G3DSA:3.30.750.24 30 89 1.7E-6 T 10-11-2016 IPR002645 STAS domain CJM129_RS08710 2ea84a868734894cf384d31a90b63097 369 Pfam PF01740 STAS domain 35 89 6.4E-5 T 10-11-2016 IPR002645 STAS domain CJM129_RS08710 2ea84a868734894cf384d31a90b63097 369 SUPERFAMILY SSF52091 2 89 1.47E-9 T 10-11-2016 IPR002645 STAS domain CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 332 393 7.0E-17 T 10-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 PANTHER PTHR10584 11 333 7.3E-92 T 10-11-2016 CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 305 6.0E-113 T 10-11-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 Pfam PF01467 Cytidylyltransferase-like 335 429 7.4E-15 T 10-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 Hamap MF_01603 Bifunctional protein HldE [hldE]. 3 460 39.125 T 10-11-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 SUPERFAMILY SSF52374 330 457 8.16E-27 T 10-11-2016 CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 Gene3D G3DSA:3.40.1190.20 11 306 1.8E-58 T 10-11-2016 IPR029056 Ribokinase-like CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 325 458 3.9E-57 T 10-11-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 SUPERFAMILY SSF53613 10 307 1.36E-51 T 10-11-2016 IPR029056 Ribokinase-like CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 PANTHER PTHR10584:SF159 11 333 7.3E-92 T 10-11-2016 CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 Gene3D G3DSA:3.40.50.620 330 436 4.2E-33 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS06000 73b3f4dbe36f6b6c39bb932cb6a9908d 461 Pfam PF00294 pfkB family carbohydrate kinase 10 296 3.4E-38 T 10-11-2016 IPR011611 Carbohydrate kinase PfkB CJM129_RS01105 7e46c9eface35fd411160521e8dc9bd3 209 SUPERFAMILY SSF53335 10 207 7.67E-33 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01105 7e46c9eface35fd411160521e8dc9bd3 209 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 131 146 - T 10-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CJM129_RS01105 7e46c9eface35fd411160521e8dc9bd3 209 Gene3D G3DSA:3.40.50.150 17 208 5.6E-46 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01105 7e46c9eface35fd411160521e8dc9bd3 209 PANTHER PTHR11579 1 206 9.4E-37 T 10-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CJM129_RS01105 7e46c9eface35fd411160521e8dc9bd3 209 PANTHER PTHR11579:SF0 1 206 9.4E-37 T 10-11-2016 CJM129_RS01105 7e46c9eface35fd411160521e8dc9bd3 209 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 7 208 3.0E-63 T 10-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CJM129_RS01105 7e46c9eface35fd411160521e8dc9bd3 209 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 208 1.3E-51 T 10-11-2016 CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 Gene3D G3DSA:3.90.1150.10 5 52 1.6E-33 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 Gene3D G3DSA:3.90.1150.10 299 391 1.6E-33 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 PANTHER PTHR11986 4 391 2.8E-166 T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 PANTHER PTHR11986:SF79 4 391 2.8E-166 T 10-11-2016 CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 214 250 - T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 9 390 2.4E-142 T 10-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 Pfam PF00202 Aminotransferase class-III 14 390 1.3E-112 T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 SUPERFAMILY SSF53383 7 392 4.57E-115 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 6 391 42.796 T 10-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CJM129_RS01100 4375bbdc8a13ac0a79f0ef8bbfe0e1be 393 Gene3D G3DSA:3.40.640.10 53 298 7.2E-84 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS04840 7bc10db498e33436dac3f991058985b6 186 Pfam PF00925 GTP cyclohydrolase II 9 155 2.1E-55 T 10-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CJM129_RS04840 7bc10db498e33436dac3f991058985b6 186 PANTHER PTHR21327 3 185 1.2E-73 T 10-11-2016 CJM129_RS04840 7bc10db498e33436dac3f991058985b6 186 SUPERFAMILY SSF142695 3 155 2.22E-48 T 10-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CJM129_RS04840 7bc10db498e33436dac3f991058985b6 186 PANTHER PTHR21327:SF6 3 185 1.2E-73 T 10-11-2016 CJM129_RS04840 7bc10db498e33436dac3f991058985b6 186 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 8 185 1.4E-69 T 10-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 Gene3D G3DSA:1.10.8.60 183 255 3.1E-26 T 10-11-2016 CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 PANTHER PTHR13779:SF25 1 334 4.1E-147 T 10-11-2016 CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 325 9.7E-134 T 10-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 335 145.841 T 10-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 SUPERFAMILY SSF52540 20 250 1.08E-52 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 325 1.3E-24 T 10-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 8.0E-109 T 10-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 330 3.0E-38 T 10-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 Gene3D G3DSA:1.10.10.10 257 327 6.7E-25 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 SUPERFAMILY SSF46785 256 327 1.5E-17 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 PANTHER PTHR13779 1 334 4.1E-147 T 10-11-2016 CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 SMART SM00382 51 184 8.1E-10 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS07320 f3975b5c1e7f7c08f6ac10f9ddec0782 335 Gene3D G3DSA:3.40.50.300 20 179 3.2E-32 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00330 202744c9ee2038f7d851ca70aa0f2ea1 288 PANTHER PTHR13696 20 271 4.0E-55 T 10-11-2016 CJM129_RS00330 202744c9ee2038f7d851ca70aa0f2ea1 288 SUPERFAMILY SSF52540 24 283 9.62E-46 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00330 202744c9ee2038f7d851ca70aa0f2ea1 288 PIRSF PIRSF003092 1 288 7.2E-68 T 10-11-2016 IPR025501 ATP binding protein MinD CJM129_RS00330 202744c9ee2038f7d851ca70aa0f2ea1 288 PANTHER PTHR13696:SF3 20 271 4.0E-55 T 10-11-2016 CJM129_RS00330 202744c9ee2038f7d851ca70aa0f2ea1 288 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 26 206 5.3E-29 T 10-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CJM129_RS00330 202744c9ee2038f7d851ca70aa0f2ea1 288 Gene3D G3DSA:3.40.50.300 22 261 8.5E-55 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02570 3190e8bde75099584b544753033a2b95 281 Gene3D G3DSA:3.40.50.970 15 255 1.2E-72 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS02570 3190e8bde75099584b544753033a2b95 281 SUPERFAMILY SSF52518 14 254 6.71E-66 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS02570 3190e8bde75099584b544753033a2b95 281 PANTHER PTHR18968 7 274 4.0E-98 T 10-11-2016 CJM129_RS02570 3190e8bde75099584b544753033a2b95 281 PANTHER PTHR18968:SF89 7 274 4.0E-98 T 10-11-2016 CJM129_RS02570 3190e8bde75099584b544753033a2b95 281 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 198 2.7E-34 T 10-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 SUPERFAMILY SSF52540 1 249 1.43E-71 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 Pfam PF09383 NIL domain 265 334 1.2E-17 T 10-11-2016 IPR018449 NIL domain CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 Pfam PF00005 ABC transporter 18 182 1.7E-37 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 PANTHER PTHR24220:SF549 3 267 2.7E-114 T 10-11-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 Gene3D G3DSA:3.30.70.260 248 334 1.7E-19 T 10-11-2016 CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 Gene3D G3DSA:3.40.50.300 1 247 4.1E-78 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 SUPERFAMILY SSF55021 249 334 2.75E-18 T 10-11-2016 CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 SMART SM00382 26 239 5.7E-14 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 PANTHER PTHR24220 3 267 2.7E-114 T 10-11-2016 CJM129_RS03750 6bcf428b6802a6fadacfb5299e42ce88 336 SMART SM00930 262 335 2.7E-22 T 10-11-2016 IPR018449 NIL domain CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 SUPERFAMILY SSF54810 391 511 1.57E-49 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 4.7E-7 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 4.7E-7 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 4.7E-7 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 PANTHER PTHR11922:SF2 6 508 3.2E-273 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 Gene3D G3DSA:3.40.50.620 196 385 3.5E-56 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 511 53.719 T 10-11-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 Gene3D G3DSA:3.30.300.10 387 511 5.1E-51 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 SUPERFAMILY SSF52402 181 432 7.72E-52 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 PANTHER PTHR11922 6 508 3.2E-273 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 Pfam PF02540 NAD synthase 211 288 6.1E-7 T 10-11-2016 IPR022310 NAD/GMP synthase CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 SUPERFAMILY SSF52317 6 197 6.17E-59 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 PRINTS PR00097 Anthranilate synthase component II signature 165 178 5.5E-5 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 PRINTS PR00097 Anthranilate synthase component II signature 77 88 5.5E-5 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 PRINTS PR00097 Anthranilate synthase component II signature 50 59 5.5E-5 T 10-11-2016 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 Gene3D G3DSA:3.40.50.880 5 192 3.7E-67 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 511 1.5E-146 T 10-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 Pfam PF00117 Glutamine amidotransferase class-I 8 186 2.5E-45 T 10-11-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 Pfam PF00958 GMP synthase C terminal domain 419 510 1.8E-43 T 10-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CJM129_RS06495 c1ef9b52f3c48c2746ae4660746ceaad 511 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 193 2.4E-78 T 10-11-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 CJM129_RS00735 db2e244d84b1885eaa6fea709b0c58ff 593 PANTHER PTHR35399 35 593 6.1E-185 T 10-11-2016 CJM129_RS00735 db2e244d84b1885eaa6fea709b0c58ff 593 Gene3D G3DSA:2.120.10.30 332 371 6.9E-8 T 10-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like CJM129_RS00735 db2e244d84b1885eaa6fea709b0c58ff 593 Gene3D G3DSA:2.120.10.30 483 556 6.9E-8 T 10-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like CJM129_RS00735 db2e244d84b1885eaa6fea709b0c58ff 593 PANTHER PTHR35399:SF2 35 593 6.1E-185 T 10-11-2016 CJM129_RS00735 db2e244d84b1885eaa6fea709b0c58ff 593 SUPERFAMILY SSF63829 265 322 6.76E-10 T 10-11-2016 CJM129_RS00735 db2e244d84b1885eaa6fea709b0c58ff 593 SUPERFAMILY SSF63829 435 562 6.76E-10 T 10-11-2016 CJM129_RS00735 db2e244d84b1885eaa6fea709b0c58ff 593 Pfam PF05787 Bacterial protein of unknown function (DUF839) 36 562 4.6E-169 T 10-11-2016 IPR008557 Protein of unknown function DUF839 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 Gene3D G3DSA:4.10.640.10 9 76 9.8E-27 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 Pfam PF01084 Ribosomal protein S18 18 69 1.8E-21 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 9.0E-15 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 9.0E-15 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 9.0E-15 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 9.0E-15 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 PANTHER PTHR13479 1 82 1.2E-19 T 10-11-2016 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 74 3.0E-25 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 73 5.6E-34 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 1 74 18.458 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05625 e52c144afa85e7ed980bc929c625f08c 86 SUPERFAMILY SSF46911 4 75 4.45E-23 T 10-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS07785 541f5ea33adb846f6f12753f7cf6018a 227 Gene3D G3DSA:3.40.50.150 35 226 9.9E-50 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07785 541f5ea33adb846f6f12753f7cf6018a 227 SUPERFAMILY SSF53335 46 225 7.15E-30 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07785 541f5ea33adb846f6f12753f7cf6018a 227 Pfam PF03602 Conserved hypothetical protein 95 46 225 9.8E-35 T 10-11-2016 CJM129_RS07785 541f5ea33adb846f6f12753f7cf6018a 227 PIRSF PIRSF004553 43 227 4.0E-32 T 10-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS07785 541f5ea33adb846f6f12753f7cf6018a 227 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 44 226 1.8E-35 T 10-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 SMART SM00729 11 212 1.3E-11 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 320 1.1E-110 T 10-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 Gene3D G3DSA:3.20.20.70 2 300 1.5E-68 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 2 320 37.654 T 10-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 Pfam PF04055 Radical SAM superfamily 15 175 1.4E-24 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 PANTHER PTHR22960 1 273 9.3E-99 T 10-11-2016 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 Pfam PF13353 4Fe-4S single cluster domain 18 121 2.3E-9 T 10-11-2016 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 302 4.0E-30 T 10-11-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 SUPERFAMILY SSF102114 2 269 6.54E-66 T 10-11-2016 CJM129_RS00815 41d34297c8d2fb9d471ed69af8587751 320 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 10-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS01750 5e73e246e0c22515aa1ecad2e3da4a5b 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 363 9.3E-103 T 10-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CJM129_RS01750 5e73e246e0c22515aa1ecad2e3da4a5b 367 SUPERFAMILY SSF111369 51 285 3.79E-52 T 10-11-2016 CJM129_RS01750 5e73e246e0c22515aa1ecad2e3da4a5b 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 283 3.0E-18 T 10-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJM129_RS01750 5e73e246e0c22515aa1ecad2e3da4a5b 367 Gene3D G3DSA:1.20.1600.10 88 168 1.3E-4 T 10-11-2016 CJM129_RS01750 5e73e246e0c22515aa1ecad2e3da4a5b 367 PANTHER PTHR30158 9 367 1.6E-83 T 10-11-2016 CJM129_RS01750 5e73e246e0c22515aa1ecad2e3da4a5b 367 Gene3D G3DSA:2.40.50.100 169 200 3.2E-20 T 10-11-2016 CJM129_RS01750 5e73e246e0c22515aa1ecad2e3da4a5b 367 Gene3D G3DSA:2.40.50.100 62 87 3.2E-20 T 10-11-2016 CJM129_RS00270 c1c9aff88cb6a30fac8101bca96289b6 83 PANTHER PTHR10283:SF76 1 81 1.8E-18 T 10-11-2016 CJM129_RS00270 c1c9aff88cb6a30fac8101bca96289b6 83 PANTHER PTHR10283 1 81 1.8E-18 T 10-11-2016 CJM129_RS00270 c1c9aff88cb6a30fac8101bca96289b6 83 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 81 1.2E-15 T 10-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 SMART SM00874 393 462 1.4E-16 T 10-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Pfam PF03483 B3/4 domain 227 374 4.4E-13 T 10-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Gene3D G3DSA:3.30.930.10 490 671 3.5E-36 T 10-11-2016 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Gene3D G3DSA:3.50.40.10 213 345 8.0E-7 T 10-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Pfam PF03484 tRNA synthetase B5 domain 396 461 4.7E-13 T 10-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 PANTHER PTHR10947 2 773 1.7E-123 T 10-11-2016 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Gene3D G3DSA:3.30.70.380 684 773 1.5E-20 T 10-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 SUPERFAMILY SSF54991 678 773 2.62E-24 T 10-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 SUPERFAMILY SSF56037 216 381 1.88E-18 T 10-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 SUPERFAMILY SSF46955 394 466 2.56E-14 T 10-11-2016 IPR009061 Putative DNA-binding domain CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Gene3D G3DSA:3.30.56.10 1 39 2.8E-21 T 10-11-2016 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 SMART SM00896 682 773 6.5E-28 T 10-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 768 33.216 T 10-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Gene3D G3DSA:3.30.56.20 396 465 3.9E-17 T 10-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 PANTHER PTHR10947:SF0 2 773 1.7E-123 T 10-11-2016 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Pfam PF01588 Putative tRNA binding domain 45 139 1.8E-21 T 10-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 SUPERFAMILY SSF50249 43 194 1.4E-38 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 SMART SM00873 216 377 5.0E-6 T 10-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 SUPERFAMILY SSF55681 458 671 3.08E-30 T 10-11-2016 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Pfam PF03147 Ferredoxin-fold anticodon binding domain 682 773 3.0E-20 T 10-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 Gene3D G3DSA:2.40.50.140 44 208 3.1E-42 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04320 50bcf853283184c99cb6da52382cee47 773 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 773 2.9E-230 T 10-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 SUPERFAMILY SSF52540 9 239 1.22E-47 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 Pfam PF12848 ABC transporter 227 300 2.4E-8 T 10-11-2016 IPR032781 ABC-transporter extension domain CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 Pfam PF00005 ABC transporter 348 481 3.9E-23 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 Pfam PF00005 ABC transporter 19 188 7.0E-26 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 SMART SM00382 28 233 1.1E-8 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 SMART SM00382 356 532 5.6E-13 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 Pfam PF16326 ABC transporter C-terminal domain 571 633 3.0E-11 T 10-11-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 Gene3D G3DSA:3.40.50.300 329 562 3.4E-45 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 Gene3D G3DSA:3.40.50.300 3 90 5.5E-50 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 Gene3D G3DSA:3.40.50.300 126 273 5.5E-50 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 PANTHER PTHR19211 1 580 2.1E-154 T 10-11-2016 CJM129_RS04280 35ca3769c29b1caf0bb7e7a5b853b890 643 SUPERFAMILY SSF52540 320 527 3.28E-45 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 PANTHER PTHR11654 275 476 9.0E-124 T 10-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 Pfam PF00854 POT family 90 474 7.6E-64 T 10-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 PANTHER PTHR11654:SF119 11 227 9.0E-124 T 10-11-2016 CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 11 515 2.1E-103 T 10-11-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 PANTHER PTHR11654 11 227 9.0E-124 T 10-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 SUPERFAMILY SSF103473 282 510 4.19E-36 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 SUPERFAMILY SSF103473 12 210 4.19E-36 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 PANTHER PTHR11654:SF119 275 476 9.0E-124 T 10-11-2016 CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 Gene3D G3DSA:1.20.1250.20 295 510 1.9E-9 T 10-11-2016 CJM129_RS03165 9645461ef6e640ae6e7f672b707b6410 517 Gene3D G3DSA:1.20.1250.20 25 202 6.4E-21 T 10-11-2016 CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 SMART SM00825 Beta-ketoacyl synthase 4 403 1.9E-11 T 10-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 SUPERFAMILY SSF53901 212 402 1.62E-64 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 PIRSF PIRSF000447 1 404 3.8E-166 T 10-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 Gene3D G3DSA:3.40.47.10 2 254 3.1E-70 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 401 1.8E-182 T 10-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 2.3E-52 T 10-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 Gene3D G3DSA:3.40.47.10 261 403 5.9E-55 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 SUPERFAMILY SSF53901 2 249 2.51E-68 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 PANTHER PTHR11712 2 402 2.0E-174 T 10-11-2016 CJM129_RS02150 f1c25d6dd0b9d6590ef61628105bf516 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 4.1E-30 T 10-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 256 48.316 T 10-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 59 - T 10-11-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 SUPERFAMILY SSF53335 2 257 2.84E-56 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 2 254 3.1E-70 T 10-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 255 4.1E-49 T 10-11-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 Gene3D G3DSA:1.10.8.100 194 257 6.1E-7 T 10-11-2016 IPR023165 rRNA adenine dimethylase-like CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 PANTHER PTHR11727:SF7 2 261 8.5E-54 T 10-11-2016 CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 Gene3D G3DSA:3.40.50.150 2 188 1.7E-54 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 PANTHER PTHR11727 2 261 8.5E-54 T 10-11-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CJM129_RS09115 fc2e7c5f535b54dfd1efc522ae20beb7 266 SMART SM00650 18 188 1.4E-67 T 10-11-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CJM129_RS05560 a323ff1363bcbb2282b4bd4ed636fa30 453 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 4 452 86.219 T 10-11-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJM129_RS05560 a323ff1363bcbb2282b4bd4ed636fa30 453 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 2 452 2.6E-169 T 10-11-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJM129_RS05560 a323ff1363bcbb2282b4bd4ed636fa30 453 ProSitePatterns PS00571 Amidases signature. 129 160 - T 10-11-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJM129_RS05560 a323ff1363bcbb2282b4bd4ed636fa30 453 Pfam PF01425 Amidase 50 441 3.2E-135 T 10-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJM129_RS05560 a323ff1363bcbb2282b4bd4ed636fa30 453 PANTHER PTHR11895 49 453 1.9E-169 T 10-11-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJM129_RS05560 a323ff1363bcbb2282b4bd4ed636fa30 453 SUPERFAMILY SSF75304 50 451 5.63E-128 T 10-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJM129_RS05560 a323ff1363bcbb2282b4bd4ed636fa30 453 Gene3D G3DSA:3.90.1300.10 49 452 4.2E-140 T 10-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJM129_RS05560 a323ff1363bcbb2282b4bd4ed636fa30 453 PANTHER PTHR11895:SF7 49 453 1.9E-169 T 10-11-2016 CJM129_RS07030 0f0dae956ac3b382a1c143442ec9cfb0 502 PANTHER PTHR24095 32 492 5.6E-114 T 10-11-2016 CJM129_RS07030 0f0dae956ac3b382a1c143442ec9cfb0 502 Gene3D G3DSA:3.30.300.30 414 501 3.3E-23 T 10-11-2016 CJM129_RS07030 0f0dae956ac3b382a1c143442ec9cfb0 502 Gene3D G3DSA:3.40.50.980 164 327 4.7E-37 T 10-11-2016 CJM129_RS07030 0f0dae956ac3b382a1c143442ec9cfb0 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 10-11-2016 IPR020845 AMP-binding, conserved site CJM129_RS07030 0f0dae956ac3b382a1c143442ec9cfb0 502 SUPERFAMILY SSF56801 3 501 8.5E-104 T 10-11-2016 CJM129_RS07030 0f0dae956ac3b382a1c143442ec9cfb0 502 Gene3D G3DSA:3.40.50.980 4 163 1.3E-26 T 10-11-2016 CJM129_RS07030 0f0dae956ac3b382a1c143442ec9cfb0 502 Gene3D G3DSA:2.30.38.10 328 407 1.1E-17 T 10-11-2016 CJM129_RS07030 0f0dae956ac3b382a1c143442ec9cfb0 502 Pfam PF00501 AMP-binding enzyme 15 419 2.4E-67 T 10-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJM129_RS00045 25c9deb8a7fae3921b83fb49ec901d4b 191 Pfam PF01351 Ribonuclease HII 19 189 1.1E-27 T 10-11-2016 IPR024567 Ribonuclease HII/HIII domain CJM129_RS00045 25c9deb8a7fae3921b83fb49ec901d4b 191 SUPERFAMILY SSF53098 16 190 1.97E-49 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS00045 25c9deb8a7fae3921b83fb49ec901d4b 191 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 191 34.432 T 10-11-2016 IPR022898 Ribonuclease HII GO:0004523 CJM129_RS00045 25c9deb8a7fae3921b83fb49ec901d4b 191 PANTHER PTHR10954 19 189 1.3E-38 T 10-11-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 CJM129_RS00045 25c9deb8a7fae3921b83fb49ec901d4b 191 Gene3D G3DSA:3.30.420.10 18 152 1.7E-28 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS02405 21e50c69fd42284b5549a06562deea4f 332 Gene3D G3DSA:3.40.250.10 5 126 1.9E-25 T 10-11-2016 IPR001763 Rhodanese-like domain CJM129_RS02405 21e50c69fd42284b5549a06562deea4f 332 PANTHER PTHR30401 17 252 1.4E-49 T 10-11-2016 CJM129_RS02405 21e50c69fd42284b5549a06562deea4f 332 SUPERFAMILY SSF52540 141 321 1.02E-5 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02405 21e50c69fd42284b5549a06562deea4f 332 SMART SM00450 2 130 8.1E-9 T 10-11-2016 IPR001763 Rhodanese-like domain CJM129_RS02405 21e50c69fd42284b5549a06562deea4f 332 Pfam PF00581 Rhodanese-like domain 12 125 3.2E-9 T 10-11-2016 IPR001763 Rhodanese-like domain CJM129_RS02405 21e50c69fd42284b5549a06562deea4f 332 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 308 2.0E-93 T 10-11-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CJM129_RS02405 21e50c69fd42284b5549a06562deea4f 332 PANTHER PTHR30401:SF0 17 252 1.4E-49 T 10-11-2016 CJM129_RS02405 21e50c69fd42284b5549a06562deea4f 332 Gene3D G3DSA:3.40.50.300 141 277 3.2E-4 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02405 21e50c69fd42284b5549a06562deea4f 332 SUPERFAMILY SSF52821 6 138 1.57E-18 T 10-11-2016 IPR001763 Rhodanese-like domain CJM129_RS00985 b7f9fe02b022c00038ebce3e7869e724 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 354 1.1E-68 T 10-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00985 b7f9fe02b022c00038ebce3e7869e724 461 PANTHER PTHR15184:SF9 1 433 1.3E-178 T 10-11-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00985 b7f9fe02b022c00038ebce3e7869e724 461 Gene3D G3DSA:3.40.50.300 92 356 1.0E-85 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00985 b7f9fe02b022c00038ebce3e7869e724 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 10-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00985 b7f9fe02b022c00038ebce3e7869e724 461 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 5 433 7.5E-172 T 10-11-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00985 b7f9fe02b022c00038ebce3e7869e724 461 SUPERFAMILY SSF52540 92 360 1.72E-87 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00985 b7f9fe02b022c00038ebce3e7869e724 461 PANTHER PTHR15184 1 433 1.3E-178 T 10-11-2016 CJM129_RS00985 b7f9fe02b022c00038ebce3e7869e724 461 SMART SM00382 157 338 6.8E-7 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS03895 66d6a069028a35ef8491928f370100b6 580 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS03895 66d6a069028a35ef8491928f370100b6 580 SUPERFAMILY SSF52540 337 569 3.77E-76 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03895 66d6a069028a35ef8491928f370100b6 580 Gene3D G3DSA:3.40.50.300 339 563 2.6E-70 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03895 66d6a069028a35ef8491928f370100b6 580 SMART SM00382 365 549 6.4E-16 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS03895 66d6a069028a35ef8491928f370100b6 580 PANTHER PTHR24221 11 568 1.6E-182 T 10-11-2016 CJM129_RS03895 66d6a069028a35ef8491928f370100b6 580 Gene3D G3DSA:1.20.1560.10 13 324 9.4E-81 T 10-11-2016 CJM129_RS03895 66d6a069028a35ef8491928f370100b6 580 SUPERFAMILY SSF90123 13 324 9.55E-78 T 10-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJM129_RS03895 66d6a069028a35ef8491928f370100b6 580 Pfam PF00005 ABC transporter 356 503 8.2E-31 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS03895 66d6a069028a35ef8491928f370100b6 580 Pfam PF00664 ABC transporter transmembrane region 27 293 2.1E-47 T 10-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 Pfam PF02779 Transketolase, pyrimidine binding domain 338 503 3.6E-37 T 10-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 Gene3D G3DSA:3.40.50.970 328 508 2.1E-60 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 SMART SM00861 338 504 8.1E-51 T 10-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 PANTHER PTHR11624:SF1 2 307 6.7E-281 T 10-11-2016 CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 PANTHER PTHR11624 326 631 6.7E-281 T 10-11-2016 IPR033247 Transketolase family CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 PANTHER PTHR11624 2 307 6.7E-281 T 10-11-2016 IPR033247 Transketolase family CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 Gene3D G3DSA:3.40.50.970 1 314 3.9E-114 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 10-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 Pfam PF02780 Transketolase, C-terminal domain 521 623 8.5E-8 T 10-11-2016 IPR033248 Transketolase, C-terminal domain CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 Gene3D G3DSA:3.40.50.920 516 628 1.3E-38 T 10-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 627 2.0E-237 T 10-11-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 SUPERFAMILY SSF52518 2 310 1.9E-103 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 315 5.8E-117 T 10-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 SUPERFAMILY SSF52922 512 631 7.07E-32 T 10-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 ProSitePatterns PS00802 Transketolase signature 2. 447 463 - T 10-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 PANTHER PTHR11624:SF1 326 631 6.7E-281 T 10-11-2016 CJM129_RS08705 5019bffda71518b140c16b3324ec7d96 632 SUPERFAMILY SSF52518 331 505 2.65E-54 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 PANTHER PTHR20852 166 476 2.2E-213 T 10-11-2016 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 PANTHER PTHR20852 7 143 2.2E-213 T 10-11-2016 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 SUPERFAMILY SSF55931 108 475 7.36E-121 T 10-11-2016 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 264 279 - T 10-11-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 10 474 2.0E-192 T 10-11-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 20 99 2.5E-31 T 10-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 Pfam PF00120 Glutamine synthetase, catalytic domain 108 471 1.1E-123 T 10-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 Gene3D G3DSA:3.30.590.10 111 455 7.1E-122 T 10-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 PANTHER PTHR20852:SF15 166 476 2.2E-213 T 10-11-2016 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 PANTHER PTHR20852:SF15 7 143 2.2E-213 T 10-11-2016 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 SUPERFAMILY SSF54368 8 106 3.79E-34 T 10-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 SMART SM01230 107 385 4.4E-136 T 10-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 ProSitePatterns PS00180 Glutamine synthetase signature 1. 55 73 - T 10-11-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJM129_RS03375 c7aabedec17eed7b60503b4c75f571a2 476 Gene3D G3DSA:3.10.20.70 8 110 4.5E-36 T 10-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 SUPERFAMILY SSF56925 25 172 6.02E-18 T 10-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 Gene3D G3DSA:2.40.160.20 25 169 7.5E-22 T 10-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 TIGRFAM TIGR04565 OMP_myx_plus: outer membrane beta-barrel protein 39 169 3.7E-18 T 10-11-2016 IPR030820 Outer membrane beta-barrel protein, Proteobacteria CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 ProSitePatterns PS01068 OmpA-like domain. 248 292 - T 10-11-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 Gene3D G3DSA:3.30.1330.60 203 317 3.8E-38 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 Pfam PF00691 OmpA family 216 310 9.3E-25 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 SUPERFAMILY SSF103088 204 316 1.83E-34 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 PANTHER PTHR30128 215 319 3.9E-38 T 10-11-2016 CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 PRINTS PR01021 OMPA domain signature 261 277 1.1E-16 T 10-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 PRINTS PR01021 OMPA domain signature 216 238 1.1E-16 T 10-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 PRINTS PR01021 OMPA domain signature 246 261 1.1E-16 T 10-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJM129_RS07865 07af9abcfaec855af26060efb456ba6e 319 Pfam PF05736 OprF membrane domain 30 172 1.7E-6 T 10-11-2016 IPR008722 Outer membrane porin F, N-terminal CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 209 453 5.3E-41 T 10-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 SUPERFAMILY SSF64153 8 233 5.49E-38 T 10-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 8 199 3.5E-28 T 10-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 PANTHER PTHR12592:SF0 5 436 8.0E-50 T 10-11-2016 CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 Pfam PF03853 YjeF-related protein N-terminus 23 177 1.9E-23 T 10-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 Gene3D G3DSA:3.40.1190.20 212 450 6.3E-43 T 10-11-2016 IPR029056 Ribokinase-like CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 PANTHER PTHR12592 5 436 8.0E-50 T 10-11-2016 CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 PIRSF PIRSF017184 3 455 7.3E-77 T 10-11-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 Gene3D G3DSA:3.40.50.10260 7 200 1.7E-39 T 10-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 Pfam PF01256 Carbohydrate kinase 242 443 1.3E-33 T 10-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 SUPERFAMILY SSF53613 219 440 1.93E-40 T 10-11-2016 IPR029056 Ribokinase-like CJM129_RS00950 59d20b402b072cf9e226b313538836b7 456 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 399 409 - T 10-11-2016 IPR017953 Carbohydrate kinase, predicted, conserved site CJM129_RS08695 c391cccebce178d7fc685ca8ad2f6c47 364 Gene3D G3DSA:2.30.42.10 269 337 9.1E-11 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS08695 c391cccebce178d7fc685ca8ad2f6c47 364 SUPERFAMILY SSF50156 155 239 1.59E-5 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS08695 c391cccebce178d7fc685ca8ad2f6c47 364 Pfam PF13180 PDZ domain 170 243 1.1E-10 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS08695 c391cccebce178d7fc685ca8ad2f6c47 364 SMART SM00228 172 235 15.0 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS08695 c391cccebce178d7fc685ca8ad2f6c47 364 SMART SM00228 268 332 3.7E-7 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS08695 c391cccebce178d7fc685ca8ad2f6c47 364 SUPERFAMILY SSF50156 269 335 1.12E-11 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS05645 dea20637842ae89b744883a89040744d 243 SUPERFAMILY SSF51735 7 123 1.4E-11 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05645 dea20637842ae89b744883a89040744d 243 SUPERFAMILY SSF48179 145 242 1.31E-22 T 10-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJM129_RS05645 dea20637842ae89b744883a89040744d 243 Gene3D G3DSA:1.10.3730.10 145 242 3.8E-27 T 10-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CJM129_RS05645 dea20637842ae89b744883a89040744d 243 PIRSF PIRSF000193 1 243 4.7E-63 T 10-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CJM129_RS05645 dea20637842ae89b744883a89040744d 243 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 145 242 8.7E-27 T 10-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CJM129_RS05645 dea20637842ae89b744883a89040744d 243 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 2 242 1.2E-69 T 10-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CJM129_RS05645 dea20637842ae89b744883a89040744d 243 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 243 18.108 T 10-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CJM129_RS05645 dea20637842ae89b744883a89040744d 243 Gene3D G3DSA:3.40.50.720 5 135 1.3E-15 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05645 dea20637842ae89b744883a89040744d 243 PANTHER PTHR11645 8 243 1.2E-43 T 10-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CJM129_RS05645 dea20637842ae89b744883a89040744d 243 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 203 225 - T 10-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 CJM129_RS05645 dea20637842ae89b744883a89040744d 243 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 85 1.0E-7 T 10-11-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CJM129_RS06980 152a9dd6159ce9482795d83adb340cce 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 362 2.4E-99 T 10-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJM129_RS06980 152a9dd6159ce9482795d83adb340cce 376 PANTHER PTHR30244 4 370 4.0E-100 T 10-11-2016 CJM129_RS06980 152a9dd6159ce9482795d83adb340cce 376 Gene3D G3DSA:3.40.640.10 3 242 2.1E-74 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS06980 152a9dd6159ce9482795d83adb340cce 376 SUPERFAMILY SSF53383 3 369 2.09E-102 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS06980 152a9dd6159ce9482795d83adb340cce 376 PANTHER PTHR30244:SF3 4 370 4.0E-100 T 10-11-2016 CJM129_RS06980 152a9dd6159ce9482795d83adb340cce 376 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 367 5.6E-153 T 10-11-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase CJM129_RS06980 152a9dd6159ce9482795d83adb340cce 376 PIRSF PIRSF000390 1 371 4.8E-103 T 10-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJM129_RS06980 152a9dd6159ce9482795d83adb340cce 376 Gene3D G3DSA:3.90.1150.10 244 370 1.4E-24 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS08425 ab1e965af55210c8601de190ef23a867 130 Pfam PF00411 Ribosomal protein S11 19 129 3.8E-42 T 10-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CJM129_RS08425 ab1e965af55210c8601de190ef23a867 130 PIRSF PIRSF002131 1 130 1.8E-47 T 10-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CJM129_RS08425 ab1e965af55210c8601de190ef23a867 130 SUPERFAMILY SSF53137 14 130 2.09E-42 T 10-11-2016 CJM129_RS08425 ab1e965af55210c8601de190ef23a867 130 Gene3D G3DSA:3.30.420.80 9 130 3.6E-49 T 10-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CJM129_RS08425 ab1e965af55210c8601de190ef23a867 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 31.584 T 10-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CJM129_RS08425 ab1e965af55210c8601de190ef23a867 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 127 2.4E-52 T 10-11-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08425 ab1e965af55210c8601de190ef23a867 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 120 - T 10-11-2016 IPR018102 Ribosomal S11, conserved site CJM129_RS08425 ab1e965af55210c8601de190ef23a867 130 PANTHER PTHR11759 11 130 7.0E-55 T 10-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CJM129_RS06665 dfc73b8daea521a2f4b31dc0883c126b 391 Pfam PF13356 Domain of unknown function (DUF4102) 7 91 4.5E-9 T 10-11-2016 IPR025166 Domain of unknown function DUF4102 CJM129_RS06665 dfc73b8daea521a2f4b31dc0883c126b 391 PANTHER PTHR30629 2 389 8.6E-61 T 10-11-2016 CJM129_RS06665 dfc73b8daea521a2f4b31dc0883c126b 391 SUPERFAMILY SSF56349 94 378 2.94E-41 T 10-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJM129_RS06665 dfc73b8daea521a2f4b31dc0883c126b 391 Pfam PF00589 Phage integrase family 203 367 4.3E-16 T 10-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJM129_RS06665 dfc73b8daea521a2f4b31dc0883c126b 391 Gene3D G3DSA:1.10.443.10 203 374 3.6E-22 T 10-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJM129_RS06665 dfc73b8daea521a2f4b31dc0883c126b 391 Gene3D G3DSA:1.10.150.130 94 185 2.7E-7 T 10-11-2016 IPR023109 Integrase/recombinase, N-terminal CJM129_RS06665 dfc73b8daea521a2f4b31dc0883c126b 391 PANTHER PTHR30629:SF2 2 389 8.6E-61 T 10-11-2016 CJM129_RS00345 b9f55801cb8fae8e6275ebbd43765c75 159 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 139 6.0E-76 T 10-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CJM129_RS00345 b9f55801cb8fae8e6275ebbd43765c75 159 PIRSF PIRSF001399 1 145 4.0E-58 T 10-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CJM129_RS00345 b9f55801cb8fae8e6275ebbd43765c75 159 Gene3D G3DSA:3.40.50.9100 1 144 2.7E-60 T 10-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CJM129_RS00345 b9f55801cb8fae8e6275ebbd43765c75 159 SUPERFAMILY SSF52304 1 149 2.88E-58 T 10-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CJM129_RS00345 b9f55801cb8fae8e6275ebbd43765c75 159 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 10-11-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CJM129_RS00345 b9f55801cb8fae8e6275ebbd43765c75 159 Pfam PF01220 Dehydroquinase class II 2 136 6.2E-56 T 10-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CJM129_RS00345 b9f55801cb8fae8e6275ebbd43765c75 159 PANTHER PTHR21272 1 148 1.1E-77 T 10-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CJM129_RS00345 b9f55801cb8fae8e6275ebbd43765c75 159 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 159 66.136 T 10-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CJM129_RS00345 b9f55801cb8fae8e6275ebbd43765c75 159 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 141 2.6E-68 T 10-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 CJM129_RS05110 7a292b5ebee15fa2dfa8a60954fb792f 573 PIRSF PIRSF028304 1 573 1.9E-114 T 10-11-2016 IPR010272 Type VI secretion system, TssF-like CJM129_RS05110 7a292b5ebee15fa2dfa8a60954fb792f 573 PANTHER PTHR35370 3 573 2.1E-77 T 10-11-2016 CJM129_RS05110 7a292b5ebee15fa2dfa8a60954fb792f 573 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 7 573 2.1E-125 T 10-11-2016 IPR010272 Type VI secretion system, TssF-like CJM129_RS05110 7a292b5ebee15fa2dfa8a60954fb792f 573 PANTHER PTHR35370:SF4 3 573 2.1E-77 T 10-11-2016 CJM129_RS05110 7a292b5ebee15fa2dfa8a60954fb792f 573 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 7 572 2.8E-126 T 10-11-2016 IPR010272 Type VI secretion system, TssF-like CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 Pfam PF13247 4Fe-4S dicluster domain 64 175 3.1E-11 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 PANTHER PTHR11938:SF96 152 192 1.7E-65 T 10-11-2016 CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 Gene3D G3DSA:3.30.70.20 130 188 3.8E-19 T 10-11-2016 CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 Gene3D G3DSA:3.30.70.20 13 73 3.8E-19 T 10-11-2016 CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 Gene3D G3DSA:3.30.70.20 74 129 3.8E-20 T 10-11-2016 CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 PANTHER PTHR11938 13 134 1.7E-65 T 10-11-2016 CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 98 109 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 SUPERFAMILY SSF54862 11 191 1.36E-46 T 10-11-2016 CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 PANTHER PTHR11938:SF96 13 134 1.7E-65 T 10-11-2016 CJM129_RS08025 0e6ca7d397c9edee0cacf54ffed4cadb 213 PANTHER PTHR11938 152 192 1.7E-65 T 10-11-2016 CJM129_RS02415 1769f4c494ca86674b6ff34db3a8b128 303 Gene3D G3DSA:3.40.50.1400 193 296 9.6E-25 T 10-11-2016 CJM129_RS02415 1769f4c494ca86674b6ff34db3a8b128 303 Hamap MF_00323 Ferrochelatase [hemH]. 1 303 28.419 T 10-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CJM129_RS02415 1769f4c494ca86674b6ff34db3a8b128 303 Pfam PF00762 Ferrochelatase 4 297 5.6E-78 T 10-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CJM129_RS02415 1769f4c494ca86674b6ff34db3a8b128 303 ProSitePatterns PS00534 Ferrochelatase signature. 180 198 - T 10-11-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CJM129_RS02415 1769f4c494ca86674b6ff34db3a8b128 303 Gene3D G3DSA:3.40.50.1400 4 192 2.2E-46 T 10-11-2016 CJM129_RS02415 1769f4c494ca86674b6ff34db3a8b128 303 SUPERFAMILY SSF53800 4 300 4.8E-70 T 10-11-2016 CJM129_RS02415 1769f4c494ca86674b6ff34db3a8b128 303 PANTHER PTHR11108:SF1 4 292 2.8E-70 T 10-11-2016 CJM129_RS02415 1769f4c494ca86674b6ff34db3a8b128 303 TIGRFAM TIGR00109 hemH: ferrochelatase 4 298 6.5E-76 T 10-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CJM129_RS02415 1769f4c494ca86674b6ff34db3a8b128 303 PANTHER PTHR11108 4 292 2.8E-70 T 10-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 Pfam PF00700 Bacterial flagellin C-terminal helical region 670 750 1.8E-7 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 SUPERFAMILY SSF64518 539 750 2.22E-25 T 10-11-2016 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 Pfam PF00669 Bacterial flagellin N-terminal helical region 13 139 1.1E-17 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 PANTHER PTHR30244:SF5 1 180 2.8E-36 T 10-11-2016 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 SUPERFAMILY SSF64518 1 183 2.62E-38 T 10-11-2016 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 SUPERFAMILY SSF64518 377 545 2.62E-38 T 10-11-2016 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 SUPERFAMILY SSF64518 263 305 2.62E-38 T 10-11-2016 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 PANTHER PTHR30244 575 750 2.8E-36 T 10-11-2016 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 PANTHER PTHR30244 1 180 2.8E-36 T 10-11-2016 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 Gene3D G3DSA:1.20.1330.10 54 137 4.9E-18 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 Gene3D G3DSA:1.20.1330.10 181 182 4.9E-18 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 Gene3D G3DSA:1.20.1330.10 655 707 4.9E-18 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS04265 bc73906ea24ff73ae7dfa4c90ab3fa87 750 PANTHER PTHR30244:SF5 575 750 2.8E-36 T 10-11-2016 CJM129_RS00060 d64d49adb5a7b9a004fbc02a4b864a2a 558 PANTHER PTHR21000:SF11 1 558 3.0E-301 T 10-11-2016 CJM129_RS00060 d64d49adb5a7b9a004fbc02a4b864a2a 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 10-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS00060 d64d49adb5a7b9a004fbc02a4b864a2a 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 10-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS00060 d64d49adb5a7b9a004fbc02a4b864a2a 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 556 6.6E-230 T 10-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS00060 d64d49adb5a7b9a004fbc02a4b864a2a 558 SUPERFAMILY SSF52016 377 557 1.65E-57 T 10-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJM129_RS00060 d64d49adb5a7b9a004fbc02a4b864a2a 558 Pfam PF00920 Dehydratase family 31 553 3.8E-212 T 10-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS00060 d64d49adb5a7b9a004fbc02a4b864a2a 558 PANTHER PTHR21000 1 558 3.0E-301 T 10-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS00060 d64d49adb5a7b9a004fbc02a4b864a2a 558 SUPERFAMILY SSF143975 1 376 8.76E-131 T 10-11-2016 CJM129_RS00060 d64d49adb5a7b9a004fbc02a4b864a2a 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 556 43.758 T 10-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS08400 d535a644adaa86075b2aea51c5dc8ab3 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 124 149 - T 10-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJM129_RS08400 d535a644adaa86075b2aea51c5dc8ab3 431 Gene3D G3DSA:1.20.1250.20 13 220 3.5E-22 T 10-11-2016 CJM129_RS08400 d535a644adaa86075b2aea51c5dc8ab3 431 Gene3D G3DSA:1.20.1250.20 236 425 8.6E-15 T 10-11-2016 CJM129_RS08400 d535a644adaa86075b2aea51c5dc8ab3 431 PANTHER PTHR23508 2 419 2.7E-131 T 10-11-2016 CJM129_RS08400 d535a644adaa86075b2aea51c5dc8ab3 431 Pfam PF07690 Major Facilitator Superfamily 30 386 4.4E-28 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS08400 d535a644adaa86075b2aea51c5dc8ab3 431 PANTHER PTHR23508:SF5 2 419 2.7E-131 T 10-11-2016 CJM129_RS08400 d535a644adaa86075b2aea51c5dc8ab3 431 SUPERFAMILY SSF103473 12 426 1.01E-57 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 SUPERFAMILY SSF54919 1 136 8.9E-59 T 10-11-2016 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 SMART SM00562 1 137 6.5E-85 T 10-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 35.399 T 10-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 PANTHER PTHR11349 1 137 7.5E-74 T 10-11-2016 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 Pfam PF00334 Nucleoside diphosphate kinase 2 136 1.9E-56 T 10-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 10-11-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 3.8E-41 T 10-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 3.8E-41 T 10-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 3.8E-41 T 10-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 3.8E-41 T 10-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 3.8E-41 T 10-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS01580 a0e8aac34dd8099e2af7b9ef4321edb3 137 Gene3D G3DSA:3.30.70.141 1 137 3.7E-60 T 10-11-2016 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 4.4E-33 T 10-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 387 406 4.4E-33 T 10-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 47 59 4.4E-33 T 10-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 312 328 4.4E-33 T 10-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 241 256 4.4E-33 T 10-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 PANTHER PTHR30075 1 664 4.4E-220 T 10-11-2016 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 PANTHER PTHR30075:SF2 1 664 4.4E-220 T 10-11-2016 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 662 22.473 T 10-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 662 4.5E-198 T 10-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 535 1.8E-177 T 10-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS06425 63f9690691fd044233aa7324b1c5ec00 664 SUPERFAMILY SSF109604 353 508 2.35E-7 T 10-11-2016 CJM129_RS09085 2061ca453843e9277cb4d143d1a525ae 93 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 14.3 T 10-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09085 2061ca453843e9277cb4d143d1a525ae 93 Gene3D G3DSA:3.30.70.330 7 90 6.4E-21 T 10-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 CJM129_RS09085 2061ca453843e9277cb4d143d1a525ae 93 SUPERFAMILY SSF54189 7 89 2.59E-22 T 10-11-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09085 2061ca453843e9277cb4d143d1a525ae 93 Pfam PF00276 Ribosomal protein L23 8 88 7.0E-19 T 10-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CJM129_RS07445 163037d71cde64da04dc97a667515106 120 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 118 9.4E-47 T 10-11-2016 IPR006056 RidA family CJM129_RS07445 163037d71cde64da04dc97a667515106 120 Pfam PF01042 Endoribonuclease L-PSP 2 118 8.9E-41 T 10-11-2016 IPR006175 YjgF/YER057c/UK114 family CJM129_RS07445 163037d71cde64da04dc97a667515106 120 SUPERFAMILY SSF55298 3 119 3.3E-42 T 10-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJM129_RS07445 163037d71cde64da04dc97a667515106 120 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 95 113 - T 10-11-2016 IPR019897 RidA, conserved site CJM129_RS07445 163037d71cde64da04dc97a667515106 120 PANTHER PTHR11803 5 119 5.7E-51 T 10-11-2016 IPR006175 YjgF/YER057c/UK114 family CJM129_RS07445 163037d71cde64da04dc97a667515106 120 Gene3D G3DSA:3.30.1330.40 3 119 3.1E-46 T 10-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJM129_RS07445 163037d71cde64da04dc97a667515106 120 PANTHER PTHR11803:SF15 5 119 5.7E-51 T 10-11-2016 CJM129_RS08035 69d62953d21b73b982ce24af465ae3aa 180 Gene3D G3DSA:3.40.50.740 107 177 6.5E-23 T 10-11-2016 CJM129_RS08035 69d62953d21b73b982ce24af465ae3aa 180 Pfam PF00384 Molybdopterin oxidoreductase 107 176 4.6E-10 T 10-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS08035 69d62953d21b73b982ce24af465ae3aa 180 PANTHER PTHR11615 1 180 1.5E-53 T 10-11-2016 CJM129_RS08035 69d62953d21b73b982ce24af465ae3aa 180 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 72 - T 10-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CJM129_RS08035 69d62953d21b73b982ce24af465ae3aa 180 SUPERFAMILY SSF53706 48 180 5.1E-49 T 10-11-2016 CJM129_RS08035 69d62953d21b73b982ce24af465ae3aa 180 Gene3D G3DSA:2.20.25.90 49 104 1.6E-17 T 10-11-2016 CJM129_RS08035 69d62953d21b73b982ce24af465ae3aa 180 SMART SM00926 50 104 9.7E-13 T 10-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CJM129_RS08035 69d62953d21b73b982ce24af465ae3aa 180 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 51 102 9.9E-13 T 10-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CJM129_RS08035 69d62953d21b73b982ce24af465ae3aa 180 PANTHER PTHR11615:SF140 1 180 1.5E-53 T 10-11-2016 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 Gene3D G3DSA:3.30.250.10 269 327 1.1E-28 T 10-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 Pfam PF00154 recA bacterial DNA recombination protein 7 269 2.2E-139 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 PANTHER PTHR22942:SF1 3 336 5.7E-192 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.4E-172 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 ProSitePatterns PS00321 recA signature. 214 222 - T 10-11-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 Gene3D G3DSA:3.40.50.300 29 268 1.1E-79 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 PRINTS PR00142 RecA protein signature 244 273 8.4E-86 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 PRINTS PR00142 RecA protein signature 298 315 8.4E-86 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 PRINTS PR00142 RecA protein signature 211 239 8.4E-86 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 PRINTS PR00142 RecA protein signature 127 156 8.4E-86 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 PRINTS PR00142 RecA protein signature 93 122 8.4E-86 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 PRINTS PR00142 RecA protein signature 165 194 8.4E-86 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 PANTHER PTHR22942 3 336 5.7E-192 T 10-11-2016 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 SMART SM00382 57 229 2.5E-12 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 Hamap MF_00268 Protein RecA [recA]. 5 330 51.677 T 10-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 SUPERFAMILY SSF54752 269 326 1.12E-21 T 10-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal CJM129_RS08945 107344edaa96b006a3d23d13a0668770 343 SUPERFAMILY SSF52540 4 268 7.34E-64 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 8.2E-102 T 10-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 SUPERFAMILY SSF48592 372 522 1.02E-31 T 10-11-2016 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 Gene3D G3DSA:1.10.560.10 3 187 2.5E-47 T 10-11-2016 IPR027413 GroEL-like equatorial domain CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 Gene3D G3DSA:1.10.560.10 365 516 8.1E-39 T 10-11-2016 IPR027413 GroEL-like equatorial domain CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 Hamap MF_00600 60 kDa chaperonin [groL]. 1 544 41.92 T 10-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 2.8E-262 T 10-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 PANTHER PTHR11353 1 545 3.1E-241 T 10-11-2016 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 Gene3D G3DSA:3.50.7.10 188 364 1.3E-100 T 10-11-2016 IPR027409 GroEL-like apical domain CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 SUPERFAMILY SSF48592 1 229 6.93E-65 T 10-11-2016 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 SUPERFAMILY SSF52029 183 375 1.02E-84 T 10-11-2016 IPR027409 GroEL-like apical domain CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 10-11-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 PRINTS PR00298 60kDa chaperonin signature 397 418 1.2E-72 T 10-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 PRINTS PR00298 60kDa chaperonin signature 267 290 1.2E-72 T 10-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 PRINTS PR00298 60kDa chaperonin signature 349 374 1.2E-72 T 10-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 PRINTS PR00298 60kDa chaperonin signature 82 109 1.2E-72 T 10-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CJM129_RS06355 366d5d403706288aea05c6b8cbf8c239 545 PRINTS PR00298 60kDa chaperonin signature 26 52 1.2E-72 T 10-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 Gene3D G3DSA:3.50.50.60 367 479 9.0E-14 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 467 4.1E-29 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 SUPERFAMILY SSF46548 5 163 1.26E-27 T 10-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 PANTHER PTHR11938:SF75 341 468 5.5E-139 T 10-11-2016 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 PANTHER PTHR11938:SF75 26 325 5.5E-139 T 10-11-2016 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 5.3E-19 T 10-11-2016 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 PRINTS PR00419 Adrenodoxin reductase family signature 292 306 5.3E-19 T 10-11-2016 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 5.3E-19 T 10-11-2016 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 4 478 1.7E-175 T 10-11-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 Gene3D G3DSA:3.50.50.60 156 333 8.0E-51 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 139 2.4E-15 T 10-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II CJM129_RS00040 68912c8bea89a91698b008535350d567 481 SUPERFAMILY SSF51971 151 415 1.12E-55 T 10-11-2016 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 SUPERFAMILY SSF51971 362 480 7.53E-10 T 10-11-2016 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 PANTHER PTHR11938 341 468 5.5E-139 T 10-11-2016 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 PANTHER PTHR11938 26 325 5.5E-139 T 10-11-2016 CJM129_RS00040 68912c8bea89a91698b008535350d567 481 Gene3D G3DSA:1.10.1060.10 5 155 7.3E-32 T 10-11-2016 CJM129_RS01695 66c45738613db453cc862b8362eb34c5 223 Gene3D G3DSA:3.40.50.2300 1 117 9.6E-27 T 10-11-2016 CJM129_RS01695 66c45738613db453cc862b8362eb34c5 223 SUPERFAMILY SSF52172 1 172 2.52E-28 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS01695 66c45738613db453cc862b8362eb34c5 223 SMART SM00448 1 112 6.4E-23 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS01695 66c45738613db453cc862b8362eb34c5 223 SMART SM00862 142 217 8.7E-20 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS01695 66c45738613db453cc862b8362eb34c5 223 Gene3D G3DSA:1.10.10.10 121 217 1.7E-27 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS01695 66c45738613db453cc862b8362eb34c5 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 217 3.6E-20 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS01695 66c45738613db453cc862b8362eb34c5 223 Pfam PF00072 Response regulator receiver domain 3 112 2.2E-19 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS01695 66c45738613db453cc862b8362eb34c5 223 PANTHER PTHR26402:SF578 1 217 1.1E-52 T 10-11-2016 CJM129_RS01695 66c45738613db453cc862b8362eb34c5 223 PANTHER PTHR26402 1 217 1.1E-52 T 10-11-2016 CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 Gene3D G3DSA:3.40.50.2300 2 124 4.4E-36 T 10-11-2016 CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 Gene3D G3DSA:1.10.10.10 129 223 1.6E-27 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 SUPERFAMILY SSF52172 2 124 1.85E-35 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 PANTHER PTHR26402 2 224 3.4E-69 T 10-11-2016 CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 PANTHER PTHR26402:SF578 2 224 3.4E-69 T 10-11-2016 CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 SMART SM00862 146 222 2.4E-22 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 2.5E-21 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 SMART SM00448 2 112 1.1E-35 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 SUPERFAMILY SSF46894 130 223 7.94E-24 T 10-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJM129_RS06390 fc477d2f74520d19cbba53bdb0630834 224 Pfam PF00072 Response regulator receiver domain 4 113 2.5E-25 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 SUPERFAMILY SSF48452 466 530 1.75E-15 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 SUPERFAMILY SSF48452 148 214 1.75E-15 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 SUPERFAMILY SSF48452 314 351 1.75E-15 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 Pfam PF13432 Tetratricopeptide repeat 150 208 0.006 T 10-11-2016 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 PANTHER PTHR23083 309 372 7.4E-17 T 10-11-2016 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 PANTHER PTHR23083 447 548 7.4E-17 T 10-11-2016 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 PANTHER PTHR23083 717 802 7.4E-17 T 10-11-2016 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 PANTHER PTHR23083 141 243 7.4E-17 T 10-11-2016 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 PANTHER PTHR23083 262 280 7.4E-17 T 10-11-2016 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 SMART SM00028 499 532 4.1E-4 T 10-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 SMART SM00028 145 178 5.8 T 10-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 SMART SM00028 181 210 43.0 T 10-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 SMART SM00028 310 343 0.9 T 10-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 SUPERFAMILY SSF48452 179 295 2.09E-10 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 Gene3D G3DSA:1.25.40.10 475 530 1.2E-13 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 Gene3D G3DSA:1.25.40.10 144 383 2.5E-18 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 Gene3D G3DSA:1.25.40.10 707 802 1.2E-13 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS01865 53a2caf09bff56444781a7a70fd075f0 820 SUPERFAMILY SSF48452 714 806 1.38E-7 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 Gene3D G3DSA:3.40.50.10490 443 598 2.8E-45 T 10-11-2016 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 598 36.448 T 10-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 598 1.2E-235 T 10-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 Pfam PF13522 Glutamine amidotransferase domain 67 192 2.9E-20 T 10-11-2016 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 Pfam PF01380 SIS domain 461 540 4.1E-9 T 10-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 Pfam PF01380 SIS domain 286 413 5.0E-31 T 10-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 PANTHER PTHR10937:SF0 1 598 7.7E-235 T 10-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 SUPERFAMILY SSF53697 245 598 1.86E-89 T 10-11-2016 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 PANTHER PTHR10937 1 598 7.7E-235 T 10-11-2016 CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 Gene3D G3DSA:3.60.20.10 2 225 1.7E-63 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 SUPERFAMILY SSF56235 2 224 3.52E-60 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS07340 afbac112717adec75b0f50d822fc0554 598 Gene3D G3DSA:3.40.50.10490 243 437 1.5E-66 T 10-11-2016 CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 SUPERFAMILY SSF53163 2 163 2.62E-38 T 10-11-2016 IPR023430 Peptidase HybD-like domain CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 Gene3D G3DSA:3.40.50.1450 2 164 3.0E-53 T 10-11-2016 IPR023430 Peptidase HybD-like domain CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 PRINTS PR00446 Hydrogen uptake protein signature 59 69 3.9E-15 T 10-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 PRINTS PR00446 Hydrogen uptake protein signature 71 87 3.9E-15 T 10-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 PRINTS PR00446 Hydrogen uptake protein signature 38 55 3.9E-15 T 10-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 PRINTS PR00446 Hydrogen uptake protein signature 3 15 3.9E-15 T 10-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 PRINTS PR00446 Hydrogen uptake protein signature 15 26 3.9E-15 T 10-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 PANTHER PTHR30302:SF1 1 166 7.7E-35 T 10-11-2016 CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 150 1.1E-36 T 10-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 PANTHER PTHR30302 1 166 7.7E-35 T 10-11-2016 CJM129_RS06570 55c7a3ee6bb62e3e7098de5def343930 178 Pfam PF01750 Hydrogenase maturation protease 20 142 3.8E-24 T 10-11-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 PANTHER PTHR24096:SF211 541 1157 1.3E-121 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Gene3D G3DSA:3.30.300.30 1070 1167 3.4E-11 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 ProSitePatterns PS00455 Putative AMP-binding domain signature. 810 821 - T 10-11-2016 IPR020845 AMP-binding, conserved site CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 SUPERFAMILY SSF56801 622 1168 2.88E-90 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Pfam PF00501 AMP-binding enzyme 685 1065 7.4E-67 T 10-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Gene3D G3DSA:3.40.1130.10 436 604 4.9E-15 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 PANTHER PTHR24096 541 1157 1.3E-121 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Pfam PF01553 Acyltransferase 435 559 4.5E-19 T 10-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 SUPERFAMILY SSF69593 391 608 5.89E-27 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Pfam PF07690 Major Facilitator Superfamily 17 377 1.4E-22 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 SMART SM00563 448 562 3.3E-28 T 10-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Gene3D G3DSA:1.20.1250.20 224 413 2.1E-12 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Gene3D G3DSA:1.20.1250.20 36 208 9.3E-9 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 SUPERFAMILY SSF103473 13 416 3.92E-30 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Gene3D G3DSA:3.40.50.980 821 968 1.2E-36 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Gene3D G3DSA:2.30.38.10 984 1062 1.3E-21 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Gene3D G3DSA:3.40.50.980 795 820 7.4E-12 T 10-11-2016 CJM129_RS04530 c4c3c700677b67bfa5f78b7ada4613d8 1170 Gene3D G3DSA:3.40.50.980 624 749 7.4E-12 T 10-11-2016 CJM129_RS00915 620805c5b3061684b102f6ab44bfcb5e 248 SUPERFAMILY SSF74653 127 243 2.75E-20 T 10-11-2016 CJM129_RS00915 620805c5b3061684b102f6ab44bfcb5e 248 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 162 240 5.0E-13 T 10-11-2016 IPR006260 TonB, C-terminal GO:0006810 CJM129_RS00915 620805c5b3061684b102f6ab44bfcb5e 248 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 162 242 3.1E-20 T 10-11-2016 IPR006260 TonB, C-terminal GO:0006810 CJM129_RS00915 620805c5b3061684b102f6ab44bfcb5e 248 Gene3D G3DSA:3.30.1150.10 130 243 7.4E-22 T 10-11-2016 CJM129_RS00465 8f946f6c9f982e02984b948eaa7a3c7c 207 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 4 198 2.7E-63 T 10-11-2016 IPR014094 Penicillin-binding protein activator LpoB CJM129_RS00465 8f946f6c9f982e02984b948eaa7a3c7c 207 PANTHER PTHR40593 47 207 1.4E-13 T 10-11-2016 CJM129_RS00465 8f946f6c9f982e02984b948eaa7a3c7c 207 Pfam PF13036 Peptidoglycan-synthase activator LpoB 11 196 8.5E-50 T 10-11-2016 IPR014094 Penicillin-binding protein activator LpoB CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 SUPERFAMILY SSF57802 175 210 5.72E-11 T 10-11-2016 CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 SUPERFAMILY SSF57802 2 36 1.57E-10 T 10-11-2016 CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 Gene3D G3DSA:2.60.40.730 1 36 3.4E-7 T 10-11-2016 CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 3 33 1.6E-10 T 10-11-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 PANTHER PTHR33746 31 215 3.9E-58 T 10-11-2016 CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 SUPERFAMILY SSF47240 41 169 3.36E-31 T 10-11-2016 IPR009078 Ferritin-like superfamily CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 PANTHER PTHR33746:SF1 31 215 3.9E-58 T 10-11-2016 CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 Gene3D G3DSA:2.20.28.10 173 211 1.6E-16 T 10-11-2016 IPR004039 Rubredoxin-type fold CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 Gene3D G3DSA:1.20.1260.10 37 169 8.4E-42 T 10-11-2016 IPR012347 Ferritin-related CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 3 35 7.8E-12 T 10-11-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 CJM129_RS00055 d4f6a1593672a9c641f89f7387aa0cec 215 Pfam PF02915 Rubrerythrin 44 163 1.9E-20 T 10-11-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 SUPERFAMILY SSF52540 6 236 3.51E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 PANTHER PTHR14025:SF21 306 954 9.4E-223 T 10-11-2016 CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 Gene3D G3DSA:3.30.2060.10 101 175 2.7E-8 T 10-11-2016 CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 Pfam PF00270 DEAD/DEAH box helicase 469 627 9.0E-16 T 10-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 Pfam PF00271 Helicase conserved C-terminal domain 667 771 1.3E-17 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 SMART SM00490 688 772 2.0E-16 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 Gene3D G3DSA:3.40.50.300 647 825 2.9E-32 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 SMART SM00982 866 961 1.1E-22 T 10-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 SUPERFAMILY SSF143517 854 976 1.83E-19 T 10-11-2016 CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 SUPERFAMILY SSF141259 342 412 2.09E-20 T 10-11-2016 IPR003711 CarD-like/TRCF domain CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 Pfam PF03461 TRCF domain 867 954 8.5E-15 T 10-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 SMART SM00487 464 652 1.2E-25 T 10-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 Gene3D G3DSA:3.40.50.300 457 646 1.5E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 11 974 23.963 T 10-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 SMART SM01058 343 440 3.1E-36 T 10-11-2016 IPR003711 CarD-like/TRCF domain CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 PANTHER PTHR14025 306 954 9.4E-223 T 10-11-2016 CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 SUPERFAMILY SSF52540 517 787 1.6E-49 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05690 5fc56f11db5b0efe942d054551c20061 978 Pfam PF02559 CarD-like/TRCF domain 344 436 1.0E-19 T 10-11-2016 IPR003711 CarD-like/TRCF domain CJM129_RS03775 8ef3e7a8e3eb516f4eed243fe8ba71d9 175 ProSitePatterns PS01265 Tpx family signature. 82 93 - T 10-11-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CJM129_RS03775 8ef3e7a8e3eb516f4eed243fe8ba71d9 175 PANTHER PTHR10681:SF81 3 155 1.0E-34 T 10-11-2016 CJM129_RS03775 8ef3e7a8e3eb516f4eed243fe8ba71d9 175 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 164 34.726 T 10-11-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CJM129_RS03775 8ef3e7a8e3eb516f4eed243fe8ba71d9 175 SUPERFAMILY SSF52833 1 158 1.07E-35 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS03775 8ef3e7a8e3eb516f4eed243fe8ba71d9 175 Gene3D G3DSA:3.40.30.10 2 159 2.6E-39 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS03775 8ef3e7a8e3eb516f4eed243fe8ba71d9 175 PANTHER PTHR10681 3 155 1.0E-34 T 10-11-2016 CJM129_RS03775 8ef3e7a8e3eb516f4eed243fe8ba71d9 175 Pfam PF08534 Redoxin 20 154 1.2E-18 T 10-11-2016 IPR013740 Redoxin GO:0016491 CJM129_RS01810 e5dde58c5b5d244281c56001710ac926 297 Gene3D G3DSA:3.90.420.10 46 296 1.1E-69 T 10-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CJM129_RS01810 e5dde58c5b5d244281c56001710ac926 297 PANTHER PTHR19372 35 292 6.2E-124 T 10-11-2016 CJM129_RS01810 e5dde58c5b5d244281c56001710ac926 297 Pfam PF00174 Oxidoreductase molybdopterin binding domain 77 235 2.2E-32 T 10-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CJM129_RS01810 e5dde58c5b5d244281c56001710ac926 297 PANTHER PTHR19372:SF1 35 292 6.2E-124 T 10-11-2016 CJM129_RS01810 e5dde58c5b5d244281c56001710ac926 297 SUPERFAMILY SSF56524 53 293 1.07E-83 T 10-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CJM129_RS01810 e5dde58c5b5d244281c56001710ac926 297 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 1 297 55.371 T 10-11-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CJM129_RS05975 f61d2227bb45916f603df41970d21c9d 221 PANTHER PTHR21485:SF20 3 216 3.3E-46 T 10-11-2016 CJM129_RS05975 f61d2227bb45916f603df41970d21c9d 221 PANTHER PTHR21485 3 216 3.3E-46 T 10-11-2016 CJM129_RS05975 f61d2227bb45916f603df41970d21c9d 221 Gene3D G3DSA:3.90.550.10 3 220 2.8E-63 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05975 f61d2227bb45916f603df41970d21c9d 221 Pfam PF02348 Cytidylyltransferase 4 135 2.5E-27 T 10-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CJM129_RS05975 f61d2227bb45916f603df41970d21c9d 221 SUPERFAMILY SSF53448 3 220 8.11E-56 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07165 a0ab6ff13479ac69d8d05e374e1006b1 640 PANTHER PTHR41786:SF1 13 615 4.8E-12 T 10-11-2016 CJM129_RS07165 a0ab6ff13479ac69d8d05e374e1006b1 640 PANTHER PTHR41786 13 615 4.8E-12 T 10-11-2016 CJM129_RS07165 a0ab6ff13479ac69d8d05e374e1006b1 640 Pfam PF01973 Protein of unknown function DUF115 209 381 3.8E-45 T 10-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CJM129_RS03550 2391de43f3db09caf6da76cbaa64b370 251 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 55 68 - T 10-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CJM129_RS03550 2391de43f3db09caf6da76cbaa64b370 251 SUPERFAMILY SSF53850 1 248 2.67E-63 T 10-11-2016 CJM129_RS03550 2391de43f3db09caf6da76cbaa64b370 251 Gene3D G3DSA:3.40.190.10 138 199 5.0E-16 T 10-11-2016 CJM129_RS03550 2391de43f3db09caf6da76cbaa64b370 251 SMART SM00062 33 251 2.0E-73 T 10-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJM129_RS03550 2391de43f3db09caf6da76cbaa64b370 251 PANTHER PTHR18966 34 247 2.0E-33 T 10-11-2016 CJM129_RS03550 2391de43f3db09caf6da76cbaa64b370 251 PANTHER PTHR18966:SF191 34 247 2.0E-33 T 10-11-2016 CJM129_RS03550 2391de43f3db09caf6da76cbaa64b370 251 Gene3D G3DSA:3.40.190.10 15 137 3.1E-43 T 10-11-2016 CJM129_RS03550 2391de43f3db09caf6da76cbaa64b370 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 248 4.7E-57 T 10-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJM129_RS01765 7347efa1d8354f5e2f97bb4c0f993ee6 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.6E-18 T 10-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CJM129_RS01765 7347efa1d8354f5e2f97bb4c0f993ee6 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 14.8 T 10-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CJM129_RS01765 7347efa1d8354f5e2f97bb4c0f993ee6 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.2E-7 T 10-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CJM129_RS01765 7347efa1d8354f5e2f97bb4c0f993ee6 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.2E-7 T 10-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CJM129_RS01765 7347efa1d8354f5e2f97bb4c0f993ee6 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.2E-7 T 10-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CJM129_RS01765 7347efa1d8354f5e2f97bb4c0f993ee6 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.2E-7 T 10-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CJM129_RS01765 7347efa1d8354f5e2f97bb4c0f993ee6 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 54 2.0E-15 T 10-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CJM129_RS01765 7347efa1d8354f5e2f97bb4c0f993ee6 70 Pfam PF01165 Ribosomal protein S21 4 56 2.4E-15 T 10-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 2 130 2.5E-41 T 10-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 3.6E-11 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 3.6E-11 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 3.6E-11 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 Pfam PF00117 Glutamine amidotransferase class-I 191 370 2.1E-44 T 10-11-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 SMART SM01097 1 131 1.9E-69 T 10-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 Gene3D G3DSA:3.50.30.20 1 145 9.3E-48 T 10-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 Gene3D G3DSA:3.40.50.880 151 372 4.1E-65 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 3.0E-30 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 3.0E-30 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 189 203 3.0E-30 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 3.0E-30 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 3.0E-30 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00097 Anthranilate synthase component II signature 347 360 6.1E-7 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00097 Anthranilate synthase component II signature 263 274 6.1E-7 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PRINTS PR00097 Anthranilate synthase component II signature 235 244 6.1E-7 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 SUPERFAMILY SSF52021 1 146 5.49E-48 T 10-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 372 2.3E-143 T 10-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 SUPERFAMILY SSF52317 174 371 2.75E-53 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 PANTHER PTHR11405 1 372 6.3E-145 T 10-11-2016 CJM129_RS07945 95288b756565629cd9ace8087ace88c6 372 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 372 42.469 T 10-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 CJM129_RS04775 08bb28c1a2d3258c860426bdadf97111 279 Gene3D G3DSA:3.40.190.10 131 213 7.0E-22 T 10-11-2016 CJM129_RS04775 08bb28c1a2d3258c860426bdadf97111 279 PANTHER PTHR18966 36 257 7.2E-44 T 10-11-2016 CJM129_RS04775 08bb28c1a2d3258c860426bdadf97111 279 Gene3D G3DSA:3.40.190.10 221 257 4.2E-30 T 10-11-2016 CJM129_RS04775 08bb28c1a2d3258c860426bdadf97111 279 Gene3D G3DSA:3.40.190.10 37 129 4.2E-30 T 10-11-2016 CJM129_RS04775 08bb28c1a2d3258c860426bdadf97111 279 SUPERFAMILY SSF53850 1 256 2.18E-61 T 10-11-2016 CJM129_RS04775 08bb28c1a2d3258c860426bdadf97111 279 SMART SM00062 40 262 5.5E-75 T 10-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJM129_RS04775 08bb28c1a2d3258c860426bdadf97111 279 PANTHER PTHR18966:SF191 36 257 7.2E-44 T 10-11-2016 CJM129_RS04775 08bb28c1a2d3258c860426bdadf97111 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 251 3.1E-45 T 10-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Gene3D G3DSA:1.10.150.20 671 773 2.6E-34 T 10-11-2016 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 SUPERFAMILY SSF88723 1 166 4.25E-44 T 10-11-2016 IPR029060 PIN domain-like CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Gene3D G3DSA:3.30.420.10 298 501 1.2E-52 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 SUPERFAMILY SSF53098 298 478 1.42E-38 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 SMART SM00482 645 843 1.6E-79 T 10-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Gene3D G3DSA:3.40.50.1010 3 181 3.0E-54 T 10-11-2016 IPR029060 PIN domain-like CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 SMART SM00479 317 479 0.0083 T 10-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Gene3D G3DSA:1.10.150.20 182 242 3.3E-25 T 10-11-2016 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 SUPERFAMILY SSF56672 481 879 4.0E-129 T 10-11-2016 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 SMART SM00474 297 478 1.1E-25 T 10-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 SMART SM00475 1 258 1.4E-94 T 10-11-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 167 256 1.8E-26 T 10-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 TIGRFAM TIGR00593 pola: DNA polymerase I 4 879 3.1E-254 T 10-11-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 166 9.0E-42 T 10-11-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Gene3D G3DSA:3.30.70.370 774 878 1.5E-52 T 10-11-2016 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Gene3D G3DSA:3.30.70.370 622 670 1.5E-52 T 10-11-2016 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 682 1.1E-56 T 10-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 826 839 1.1E-56 T 10-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 768 779 1.1E-56 T 10-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 637 652 1.1E-56 T 10-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 746 757 1.1E-56 T 10-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 799 815 1.1E-56 T 10-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 614 636 1.1E-56 T 10-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 709 734 1.1E-56 T 10-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PANTHER PTHR10133:SF27 2 879 5.2E-284 T 10-11-2016 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 PANTHER PTHR10133 2 879 5.2E-284 T 10-11-2016 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Gene3D G3DSA:1.20.1060.10 502 621 2.8E-40 T 10-11-2016 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 SMART SM00279 169 204 1.1E-14 T 10-11-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Pfam PF00476 DNA polymerase family A 510 877 3.3E-129 T 10-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 ProSitePatterns PS00447 DNA polymerase family A signature. 709 728 - T 10-11-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 Pfam PF01612 3'-5' exonuclease 299 477 1.2E-25 T 10-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CJM129_RS01610 a9f4eaf42b3579724ae0bcf1ede7611c 879 SUPERFAMILY SSF47807 167 275 1.79E-27 T 10-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 421 8.1E-127 T 10-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 PIRSF PIRSF001434 1 423 1.3E-122 T 10-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 PANTHER PTHR11808 265 423 7.1E-169 T 10-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 PANTHER PTHR11808 1 236 7.1E-169 T 10-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 PANTHER PTHR11808:SF12 265 423 7.1E-169 T 10-11-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 PANTHER PTHR11808:SF12 1 236 7.1E-169 T 10-11-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 Gene3D G3DSA:3.90.1150.10 287 422 2.4E-48 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 422 2.7E-187 T 10-11-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 Gene3D G3DSA:3.40.640.10 5 286 5.5E-94 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS09205 2062c832674ba4b4655f3af504a9d0f9 423 SUPERFAMILY SSF53383 4 422 8.51E-107 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 SUPERFAMILY SSF54292 2 70 9.05E-15 T 10-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 SMART SM00929 80 120 1.2E-14 T 10-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 Gene3D G3DSA:3.30.70.20 126 220 3.0E-11 T 10-11-2016 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 72 1.4E-11 T 10-11-2016 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 PANTHER PTHR11615 2 243 1.2E-43 T 10-11-2016 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 PANTHER PTHR11615:SF38 2 243 1.2E-43 T 10-11-2016 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 SUPERFAMILY SSF54862 76 221 6.28E-26 T 10-11-2016 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 205 216 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 Pfam PF00037 4Fe-4S binding domain 201 220 5.6E-5 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 SUPERFAMILY SSF53706 232 443 1.8E-9 T 10-11-2016 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 SUPERFAMILY SSF53706 515 655 1.8E-9 T 10-11-2016 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 80 116 4.3E-12 T 10-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 CJM129_RS08325 e7294a6bbb7a81ec9bc244d524c130b7 820 Gene3D G3DSA:3.10.20.30 3 71 2.4E-6 T 10-11-2016 IPR012675 Beta-grasp domain CJM129_RS03315 de4bd1c9c99a6a5578ea6084f0b95a54 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 230 26.937 T 10-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CJM129_RS03315 de4bd1c9c99a6a5578ea6084f0b95a54 232 PANTHER PTHR34933 41 232 3.2E-39 T 10-11-2016 CJM129_RS03315 de4bd1c9c99a6a5578ea6084f0b95a54 232 PRINTS PR01008 Flagellar L-ring protein signature 172 188 3.0E-17 T 10-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CJM129_RS03315 de4bd1c9c99a6a5578ea6084f0b95a54 232 PRINTS PR01008 Flagellar L-ring protein signature 209 223 3.0E-17 T 10-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CJM129_RS03315 de4bd1c9c99a6a5578ea6084f0b95a54 232 PRINTS PR01008 Flagellar L-ring protein signature 146 161 3.0E-17 T 10-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CJM129_RS03315 de4bd1c9c99a6a5578ea6084f0b95a54 232 PRINTS PR01008 Flagellar L-ring protein signature 193 207 3.0E-17 T 10-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CJM129_RS03315 de4bd1c9c99a6a5578ea6084f0b95a54 232 PRINTS PR01008 Flagellar L-ring protein signature 66 78 3.0E-17 T 10-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CJM129_RS03315 de4bd1c9c99a6a5578ea6084f0b95a54 232 PANTHER PTHR34933:SF1 41 232 3.2E-39 T 10-11-2016 CJM129_RS03315 de4bd1c9c99a6a5578ea6084f0b95a54 232 Pfam PF02107 Flagellar L-ring protein 46 231 2.0E-53 T 10-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CJM129_RS04000 822f1839fabe293d55446b0518b508a5 403 Gene3D G3DSA:3.40.50.1100 70 321 2.6E-79 T 10-11-2016 CJM129_RS04000 822f1839fabe293d55446b0518b508a5 403 Gene3D G3DSA:3.30.70.260 325 388 9.5E-4 T 10-11-2016 CJM129_RS04000 822f1839fabe293d55446b0518b508a5 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 304 3.2E-80 T 10-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJM129_RS04000 822f1839fabe293d55446b0518b508a5 403 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 400 4.3E-189 T 10-11-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 CJM129_RS04000 822f1839fabe293d55446b0518b508a5 403 SUPERFAMILY SSF53686 4 316 1.06E-101 T 10-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJM129_RS04000 822f1839fabe293d55446b0518b508a5 403 PANTHER PTHR10314:SF17 2 356 1.1E-148 T 10-11-2016 CJM129_RS04000 822f1839fabe293d55446b0518b508a5 403 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 10-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CJM129_RS04000 822f1839fabe293d55446b0518b508a5 403 PANTHER PTHR10314 2 356 1.1E-148 T 10-11-2016 CJM129_RS01915 716c89f50d44ad939e9c53a4eaae498e 157 Gene3D G3DSA:1.10.10.10 13 94 3.6E-22 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS01915 716c89f50d44ad939e9c53a4eaae498e 157 SUPERFAMILY SSF46785 13 147 8.17E-38 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS01915 716c89f50d44ad939e9c53a4eaae498e 157 PANTHER PTHR33202 1 152 5.8E-38 T 10-11-2016 CJM129_RS01915 716c89f50d44ad939e9c53a4eaae498e 157 Pfam PF01475 Ferric uptake regulator family 22 142 7.0E-42 T 10-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CJM129_RS01405 70cbf7f3c018a6cdba257b944db056a7 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 97 1.0E-47 T 10-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CJM129_RS01405 70cbf7f3c018a6cdba257b944db056a7 126 PIRSF PIRSF006246 1 125 1.1E-50 T 10-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CJM129_RS01405 70cbf7f3c018a6cdba257b944db056a7 126 PANTHER PTHR21012 2 111 1.4E-59 T 10-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CJM129_RS01405 70cbf7f3c018a6cdba257b944db056a7 126 PANTHER PTHR21012:SF0 2 111 1.4E-59 T 10-11-2016 CJM129_RS01405 70cbf7f3c018a6cdba257b944db056a7 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 116 3.0E-47 T 10-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CJM129_RS01405 70cbf7f3c018a6cdba257b944db056a7 126 Gene3D G3DSA:2.40.40.20 1 121 3.8E-54 T 10-11-2016 CJM129_RS01405 70cbf7f3c018a6cdba257b944db056a7 126 SUPERFAMILY SSF50692 1 121 7.7E-49 T 10-11-2016 IPR009010 Aspartate decarboxylase-like domain CJM129_RS01405 70cbf7f3c018a6cdba257b944db056a7 126 Pfam PF02261 Aspartate decarboxylase 1 112 7.8E-52 T 10-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CJM129_RS01405 70cbf7f3c018a6cdba257b944db056a7 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 66.291 T 10-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 CJM129_RS09190 af94b765a9c5b8f6e3535d95fb9300ce 127 Gene3D G3DSA:3.30.1130.10 14 122 2.0E-33 T 10-11-2016 CJM129_RS09190 af94b765a9c5b8f6e3535d95fb9300ce 127 PIRSF PIRSF027377 1 127 2.1E-49 T 10-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS09190 af94b765a9c5b8f6e3535d95fb9300ce 127 PANTHER PTHR34354 1 127 4.9E-38 T 10-11-2016 CJM129_RS09190 af94b765a9c5b8f6e3535d95fb9300ce 127 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 127 42.728 T 10-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS09190 af94b765a9c5b8f6e3535d95fb9300ce 127 SUPERFAMILY SSF55620 14 115 6.6E-30 T 10-11-2016 CJM129_RS09190 af94b765a9c5b8f6e3535d95fb9300ce 127 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 14 121 3.0E-36 T 10-11-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS09190 af94b765a9c5b8f6e3535d95fb9300ce 127 PANTHER PTHR34354:SF1 1 127 4.9E-38 T 10-11-2016 CJM129_RS09190 af94b765a9c5b8f6e3535d95fb9300ce 127 Pfam PF14489 QueF-like protein 46 121 9.4E-31 T 10-11-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS07235 d2b62cde54525305144691b49e670fd8 435 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 46 145 1.4E-13 T 10-11-2016 CJM129_RS07235 d2b62cde54525305144691b49e670fd8 435 PANTHER PTHR15239 155 415 4.0E-12 T 10-11-2016 CJM129_RS07235 d2b62cde54525305144691b49e670fd8 435 PANTHER PTHR15239:SF1 155 415 4.0E-12 T 10-11-2016 CJM129_RS07235 d2b62cde54525305144691b49e670fd8 435 Pfam PF05670 Domain of unknown function (DUF814) 335 415 2.4E-18 T 10-11-2016 IPR008532 Domain of unknown function DUF814 CJM129_RS07235 d2b62cde54525305144691b49e670fd8 435 Gene3D G3DSA:2.30.310.10 18 146 3.6E-22 T 10-11-2016 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 PANTHER PTHR21403 2 299 1.7E-119 T 10-11-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 Pfam PF01634 ATP phosphoribosyltransferase 54 218 3.5E-47 T 10-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 Pfam PF08029 HisG, C-terminal domain 223 296 2.1E-23 T 10-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 SUPERFAMILY SSF54913 226 298 4.34E-21 T 10-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 Gene3D G3DSA:3.30.70.120 226 298 2.9E-29 T 10-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 34.541 T 10-11-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 297 9.0E-30 T 10-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 10-11-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 Gene3D G3DSA:3.40.190.10 2 139 2.1E-49 T 10-11-2016 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 7.9E-55 T 10-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 SUPERFAMILY SSF53850 6 224 2.27E-68 T 10-11-2016 CJM129_RS08445 759facd48f56b9131b37cf54beb4147f 299 PANTHER PTHR21403:SF0 2 299 1.7E-119 T 10-11-2016 CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 SUPERFAMILY SSF51735 4 254 1.63E-65 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.9E-12 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.9E-12 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.9E-12 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.9E-12 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.9E-12 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PANTHER PTHR24322 157 189 1.6E-55 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PANTHER PTHR24322:SF317 157 189 1.6E-55 T 10-11-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PIRSF PIRSF000094 1 258 3.6E-116 T 10-11-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.3E-84 T 10-11-2016 CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PANTHER PTHR24322 10 141 1.6E-55 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 PANTHER PTHR24322:SF317 10 141 1.6E-55 T 10-11-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CJM129_RS07485 b7cc12fa04ab2ec728fee989e0036e4b 274 Gene3D G3DSA:3.40.50.720 5 199 4.1E-64 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07160 738eda21fd2ced34a935df644462b5cb 626 Pfam PF01973 Protein of unknown function DUF115 209 384 9.0E-41 T 10-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CJM129_RS07160 738eda21fd2ced34a935df644462b5cb 626 PANTHER PTHR41786 106 463 1.7E-13 T 10-11-2016 CJM129_RS07160 738eda21fd2ced34a935df644462b5cb 626 PANTHER PTHR41786:SF1 106 463 1.7E-13 T 10-11-2016 CJM129_RS05705 49b5dcfe666c9f57fd146e5199f4b107 386 SUPERFAMILY SSF53244 268 384 3.66E-16 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS05705 49b5dcfe666c9f57fd146e5199f4b107 386 SUPERFAMILY SSF53623 19 254 3.36E-52 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS05705 49b5dcfe666c9f57fd146e5199f4b107 386 Gene3D G3DSA:3.40.1190.10 3 260 2.8E-62 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS05705 49b5dcfe666c9f57fd146e5199f4b107 386 Pfam PF08245 Mur ligase middle domain 43 199 1.9E-7 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS05705 49b5dcfe666c9f57fd146e5199f4b107 386 PANTHER PTHR11136 33 321 1.9E-50 T 10-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CJM129_RS05705 49b5dcfe666c9f57fd146e5199f4b107 386 Gene3D G3DSA:3.90.190.20 268 384 2.7E-15 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS05705 49b5dcfe666c9f57fd146e5199f4b107 386 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 382 5.9E-97 T 10-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 Pfam PF07497 Rho termination factor, RNA-binding domain 76 146 3.1E-26 T 10-11-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 181 384 1.0E-22 T 10-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 SMART SM00959 29 71 4.9E-15 T 10-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 SUPERFAMILY SSF68912 25 71 3.92E-10 T 10-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 Gene3D G3DSA:2.40.50.140 73 141 1.4E-27 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 Hamap MF_01884 Transcription termination factor Rho [rho]. 25 439 208.186 T 10-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 SMART SM00357 76 142 1.3E-13 T 10-11-2016 IPR011129 Cold shock protein GO:0003676 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 SUPERFAMILY SSF50249 73 147 1.71E-21 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 PANTHER PTHR15184:SF34 1 439 5.1E-176 T 10-11-2016 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 PANTHER PTHR15184 1 439 5.1E-176 T 10-11-2016 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 Pfam PF07498 Rho termination factor, N-terminal domain 29 71 9.1E-15 T 10-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 Gene3D G3DSA:3.40.50.300 156 436 2.1E-99 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 SUPERFAMILY SSF52540 115 392 1.23E-67 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 SMART SM00382 191 380 2.1E-8 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 Gene3D G3DSA:1.10.720.10 25 71 1.9E-17 T 10-11-2016 CJM129_RS06030 f3ff169e99981bfc0ab45bca68a27b43 439 TIGRFAM TIGR00767 rho: transcription termination factor Rho 26 438 1.6E-201 T 10-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CJM129_RS00775 08be1e629f0049a9e3f42bf8e66289d9 227 SUPERFAMILY SSF75217 62 221 3.73E-38 T 10-11-2016 IPR029028 Alpha/beta knot methyltransferases CJM129_RS00775 08be1e629f0049a9e3f42bf8e66289d9 227 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 225 1.1E-49 T 10-11-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 CJM129_RS00775 08be1e629f0049a9e3f42bf8e66289d9 227 Gene3D G3DSA:3.30.1330.30 2 69 1.2E-5 T 10-11-2016 IPR029064 50S ribosomal protein L30e-like CJM129_RS00775 08be1e629f0049a9e3f42bf8e66289d9 227 SUPERFAMILY SSF55315 1 69 8.0E-9 T 10-11-2016 IPR029064 50S ribosomal protein L30e-like CJM129_RS00775 08be1e629f0049a9e3f42bf8e66289d9 227 Pfam PF00588 SpoU rRNA Methylase family 84 221 8.8E-33 T 10-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CJM129_RS00775 08be1e629f0049a9e3f42bf8e66289d9 227 Gene3D G3DSA:3.40.1280.10 78 224 1.5E-35 T 10-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJM129_RS00775 08be1e629f0049a9e3f42bf8e66289d9 227 PANTHER PTHR12029 1 221 6.3E-34 T 10-11-2016 CJM129_RS00775 08be1e629f0049a9e3f42bf8e66289d9 227 SMART SM00967 2 74 8.6E-7 T 10-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CJM129_RS00775 08be1e629f0049a9e3f42bf8e66289d9 227 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 73 2.2E-6 T 10-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 1 354 49.77 T 10-11-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 PANTHER PTHR22976:SF4 1 354 1.5E-122 T 10-11-2016 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 Pfam PF04055 Radical SAM superfamily 54 227 5.7E-18 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 SMART SM00729 50 270 0.0024 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 PIRSF PIRSF004762 1 354 6.2E-103 T 10-11-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 Gene3D G3DSA:3.20.20.70 13 336 3.9E-57 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 SUPERFAMILY SSF102114 15 311 4.32E-47 T 10-11-2016 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 PANTHER PTHR22976 1 354 1.5E-122 T 10-11-2016 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 6 351 2.7E-143 T 10-11-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CJM129_RS07350 7b54fccaf2f15b5f7fc8e1c3c2fc0a60 354 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 46 351 1.6E-116 T 10-11-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 CJM129_RS03440 914909c8d51cce371a7335352db8c773 179 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 7 172 5.4E-43 T 10-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CJM129_RS03440 914909c8d51cce371a7335352db8c773 179 Pfam PF05239 PRC-barrel domain 96 171 2.2E-9 T 10-11-2016 IPR027275 PRC-barrel domain CJM129_RS03440 914909c8d51cce371a7335352db8c773 179 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 6 174 18.925 T 10-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CJM129_RS03440 914909c8d51cce371a7335352db8c773 179 PANTHER PTHR33692 4 166 1.0E-19 T 10-11-2016 CJM129_RS03440 914909c8d51cce371a7335352db8c773 179 Gene3D G3DSA:2.30.30.240 98 168 9.2E-14 T 10-11-2016 CJM129_RS03440 914909c8d51cce371a7335352db8c773 179 Pfam PF01782 RimM N-terminal domain 8 83 1.4E-11 T 10-11-2016 IPR002676 RimM protein GO:0006364 CJM129_RS03440 914909c8d51cce371a7335352db8c773 179 Gene3D G3DSA:2.40.30.60 3 81 1.4E-7 T 10-11-2016 IPR002676 RimM protein GO:0006364 CJM129_RS03440 914909c8d51cce371a7335352db8c773 179 SUPERFAMILY SSF50346 98 169 5.57E-12 T 10-11-2016 IPR011033 PRC-barrel-like CJM129_RS03440 914909c8d51cce371a7335352db8c773 179 SUPERFAMILY SSF50447 5 84 1.98E-8 T 10-11-2016 IPR009000 Translation protein, beta-barrel domain CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 PANTHER PTHR19211 1 522 1.0E-228 T 10-11-2016 CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 SUPERFAMILY SSF52540 3 237 2.71E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 Pfam PF12848 ABC transporter 223 306 7.1E-18 T 10-11-2016 IPR032781 ABC-transporter extension domain CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 Pfam PF00005 ABC transporter 334 463 2.3E-22 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 Pfam PF00005 ABC transporter 18 183 6.1E-20 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 SMART SM00382 342 508 1.1E-13 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 SMART SM00382 26 230 1.4E-9 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 SUPERFAMILY SSF52540 299 517 8.6E-45 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 PANTHER PTHR19211:SF38 1 522 1.0E-228 T 10-11-2016 CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 Gene3D G3DSA:3.40.50.300 259 286 7.4E-4 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 Gene3D G3DSA:3.40.50.300 1 258 6.0E-42 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02040 9c3bb7c4a93f79ad3e9fd2812c675464 525 Gene3D G3DSA:3.40.50.300 316 522 6.9E-43 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00710 c42343e24f3c24653636df5ef52d01da 443 PANTHER PTHR38733 122 397 1.0E-41 T 10-11-2016 CJM129_RS00710 c42343e24f3c24653636df5ef52d01da 443 Pfam PF10117 McrBC 5-methylcytosine restriction system component 52 397 1.8E-108 T 10-11-2016 IPR019292 5-methylcytosine restriction system component CJM129_RS00710 c42343e24f3c24653636df5ef52d01da 443 PANTHER PTHR38733:SF1 122 397 1.0E-41 T 10-11-2016 CJM129_RS06110 0a12a3a88306a2a3d7b2ca8cd1059079 235 Gene3D G3DSA:1.10.10.200 1 77 3.7E-29 T 10-11-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like CJM129_RS06110 0a12a3a88306a2a3d7b2ca8cd1059079 235 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 235 28.086 T 10-11-2016 IPR002876 Transcriptional regulator TACO1-like CJM129_RS06110 0a12a3a88306a2a3d7b2ca8cd1059079 235 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 234 2.5E-79 T 10-11-2016 IPR002876 Transcriptional regulator TACO1-like CJM129_RS06110 0a12a3a88306a2a3d7b2ca8cd1059079 235 SUPERFAMILY SSF75625 1 235 4.45E-76 T 10-11-2016 IPR029072 YebC-like CJM129_RS06110 0a12a3a88306a2a3d7b2ca8cd1059079 235 Gene3D G3DSA:3.30.70.980 134 200 6.8E-25 T 10-11-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 CJM129_RS06110 0a12a3a88306a2a3d7b2ca8cd1059079 235 Pfam PF01709 Transcriptional regulator 5 234 1.4E-77 T 10-11-2016 IPR002876 Transcriptional regulator TACO1-like CJM129_RS06110 0a12a3a88306a2a3d7b2ca8cd1059079 235 PANTHER PTHR12532 1 235 1.3E-71 T 10-11-2016 IPR002876 Transcriptional regulator TACO1-like CJM129_RS06110 0a12a3a88306a2a3d7b2ca8cd1059079 235 Gene3D G3DSA:3.30.1270.10 209 235 5.8E-30 T 10-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CJM129_RS06110 0a12a3a88306a2a3d7b2ca8cd1059079 235 Gene3D G3DSA:3.30.1270.10 80 133 5.8E-30 T 10-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 219 2.5E-15 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 PANTHER PTHR26402:SF292 4 219 5.9E-53 T 10-11-2016 CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 Gene3D G3DSA:3.40.50.2300 3 125 6.8E-29 T 10-11-2016 CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 PANTHER PTHR26402 4 219 5.9E-53 T 10-11-2016 CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 SMART SM00862 147 219 1.5E-14 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 Gene3D G3DSA:1.10.10.10 126 219 7.7E-21 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 SUPERFAMILY SSF52172 5 121 1.29E-30 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 SMART SM00448 4 115 2.8E-26 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 SUPERFAMILY SSF46894 121 219 3.12E-21 T 10-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJM129_RS04290 e0093cd6d187c159f14f85295e876019 220 Pfam PF00072 Response regulator receiver domain 6 115 5.2E-19 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 1 407 25.081 T 10-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 SUPERFAMILY SSF69075 309 410 1.7E-10 T 10-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 5 154 3.3E-38 T 10-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 312 409 4.3E-18 T 10-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 SUPERFAMILY SSF51735 158 306 3.3E-25 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 PANTHER PTHR13812:SF18 5 424 1.6E-74 T 10-11-2016 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 296 8.9E-38 T 10-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 PIRSF PIRSF000445 1 422 9.9E-121 T 10-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 PANTHER PTHR13812 5 424 1.6E-74 T 10-11-2016 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 409 1.2E-112 T 10-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 SUPERFAMILY SSF69742 2 156 1.02E-40 T 10-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 10-11-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS02595 eb62083167e4c3bffa4dcb28ceaf40c3 432 Gene3D G3DSA:3.40.50.720 163 302 3.0E-26 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 SMART SM00388 131 195 4.5E-8 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 SMART SM00387 235 339 3.1E-17 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 SUPERFAMILY SSF55874 198 338 4.85E-25 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 PANTHER PTHR24423:SF445 92 338 2.9E-32 T 10-11-2016 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 PANTHER PTHR24423:SF445 1 52 2.9E-32 T 10-11-2016 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 191 3.5E-9 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 PANTHER PTHR24423 92 338 2.9E-32 T 10-11-2016 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 PANTHER PTHR24423 1 52 2.9E-32 T 10-11-2016 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 Gene3D G3DSA:1.10.287.130 124 181 3.5E-8 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 302 6.2E-8 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 290 6.2E-8 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 321 6.2E-8 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 Gene3D G3DSA:3.30.565.10 182 338 1.3E-26 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 SUPERFAMILY SSF47384 123 191 4.12E-8 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS03845 59b95d3d04072348557d03cdf16d9b4c 339 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 338 2.2E-14 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 10 334 2.9E-52 T 10-11-2016 IPR028053 Membrane insertase YidC, N-terminal CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 11 517 21.735 T 10-11-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 Pfam PF14849 YidC periplasmic domain 80 324 1.0E-11 T 10-11-2016 IPR028053 Membrane insertase YidC, N-terminal CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 335 515 4.9E-70 T 10-11-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PRINTS PR01900 YidC translocation/secretion protein signature 470 494 1.6E-27 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PRINTS PR01900 YidC translocation/secretion protein signature 321 337 1.6E-27 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PRINTS PR01900 YidC translocation/secretion protein signature 450 465 1.6E-27 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PRINTS PR00701 60kDa inner membrane protein signature 397 420 1.6E-41 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PRINTS PR00701 60kDa inner membrane protein signature 444 466 1.6E-41 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PRINTS PR00701 60kDa inner membrane protein signature 306 326 1.6E-41 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PRINTS PR00701 60kDa inner membrane protein signature 9 30 1.6E-41 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PRINTS PR00701 60kDa inner membrane protein signature 481 504 1.6E-41 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PANTHER PTHR12428:SF14 268 515 1.9E-89 T 10-11-2016 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 PANTHER PTHR12428 268 515 1.9E-89 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS04650 3940f7981b9c41215a717662f5393a08 530 Pfam PF02096 60Kd inner membrane protein 336 515 4.0E-63 T 10-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 PRINTS PR01806 Virulence factor MviN signature 258 284 8.7E-48 T 10-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 PRINTS PR01806 Virulence factor MviN signature 151 172 8.7E-48 T 10-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 PRINTS PR01806 Virulence factor MviN signature 35 54 8.7E-48 T 10-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 PRINTS PR01806 Virulence factor MviN signature 54 70 8.7E-48 T 10-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 PRINTS PR01806 Virulence factor MviN signature 127 151 8.7E-48 T 10-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 PRINTS PR01806 Virulence factor MviN signature 356 375 8.7E-48 T 10-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 Pfam PF03023 MviN-like protein 30 462 2.0E-91 T 10-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 PANTHER PTHR11206 216 439 4.9E-17 T 10-11-2016 CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 PANTHER PTHR11206:SF90 216 439 4.9E-17 T 10-11-2016 CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 482 7.5E-143 T 10-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CJM129_RS03885 b29096efa4b5693a2f9c16c2b416095d 483 PIRSF PIRSF002869 1 482 6.8E-102 T 10-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ CJM129_RS07645 9413312a62fb09b89c06fdad2b156bac 502 Gene3D G3DSA:3.40.50.1110 3 162 1.4E-5 T 10-11-2016 IPR013830 SGNH hydrolase-type esterase domain CJM129_RS07645 9413312a62fb09b89c06fdad2b156bac 502 SUPERFAMILY SSF52266 3 161 1.01E-6 T 10-11-2016 IPR013830 SGNH hydrolase-type esterase domain CJM129_RS03995 7096e62ebfead235f5bebde9367a2077 240 PIRSF PIRSF001430 1 240 6.5E-70 T 10-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03995 7096e62ebfead235f5bebde9367a2077 240 PANTHER PTHR11142:SF0 1 240 1.1E-46 T 10-11-2016 CJM129_RS03995 7096e62ebfead235f5bebde9367a2077 240 Pfam PF01416 tRNA pseudouridine synthase 144 240 1.6E-13 T 10-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03995 7096e62ebfead235f5bebde9367a2077 240 Gene3D G3DSA:3.30.70.660 105 240 4.9E-26 T 10-11-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03995 7096e62ebfead235f5bebde9367a2077 240 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 235 5.3E-44 T 10-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03995 7096e62ebfead235f5bebde9367a2077 240 SUPERFAMILY SSF55120 1 240 5.9E-57 T 10-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03995 7096e62ebfead235f5bebde9367a2077 240 PANTHER PTHR11142 1 240 1.1E-46 T 10-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03995 7096e62ebfead235f5bebde9367a2077 240 Gene3D G3DSA:3.30.70.580 2 103 8.0E-21 T 10-11-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03995 7096e62ebfead235f5bebde9367a2077 240 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 240 27.616 T 10-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 SUPERFAMILY SSF51905 1 307 5.18E-45 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 Gene3D G3DSA:3.50.50.60 110 305 7.8E-33 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 8.3E-59 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 8.3E-59 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 8.3E-59 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 289 308 8.3E-59 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 8.3E-59 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 8.3E-59 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 8.3E-59 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 8.3E-59 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 308 1.3E-104 T 10-11-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 Gene3D G3DSA:3.50.50.60 2 109 8.0E-27 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 10-11-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PANTHER PTHR22912 3 310 4.4E-101 T 10-11-2016 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.7E-29 T 10-11-2016 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.7E-29 T 10-11-2016 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.7E-29 T 10-11-2016 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.7E-29 T 10-11-2016 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 1.7E-29 T 10-11-2016 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 PANTHER PTHR22912:SF48 3 310 4.4E-101 T 10-11-2016 CJM129_RS00740 d8fef909d590a9de41b869a7012e63e9 312 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 297 4.7E-48 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 Gene3D G3DSA:3.40.50.720 3 258 1.1E-67 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-30 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.4E-30 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 1.4E-30 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.4E-30 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.4E-30 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.4E-30 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 PANTHER PTHR24321:SF6 3 258 3.3E-27 T 10-11-2016 CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 257 2.6E-59 T 10-11-2016 CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 SUPERFAMILY SSF51735 6 257 4.85E-67 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS03915 de827f23ddeac36c6d8d2e69282c97bd 259 PANTHER PTHR24321 3 258 3.3E-27 T 10-11-2016 CJM129_RS07295 0f4201f5817d6a363083a6a8a45ff178 316 Gene3D G3DSA:2.40.128.130 42 316 4.5E-35 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS07295 0f4201f5817d6a363083a6a8a45ff178 316 Pfam PF03797 Autotransporter beta-domain 46 289 1.4E-29 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS07295 0f4201f5817d6a363083a6a8a45ff178 316 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 15 316 1.8E-21 T 10-11-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 CJM129_RS07295 0f4201f5817d6a363083a6a8a45ff178 316 SMART SM00869 48 299 3.9E-24 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS07295 0f4201f5817d6a363083a6a8a45ff178 316 SUPERFAMILY SSF103515 38 316 4.32E-40 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS03855 6cee9549f72c926cf803a2add6da688a 475 Gene3D G3DSA:3.90.190.20 354 467 2.4E-7 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS03855 6cee9549f72c926cf803a2add6da688a 475 SUPERFAMILY SSF53244 354 467 6.41E-15 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS03855 6cee9549f72c926cf803a2add6da688a 475 PANTHER PTHR23135 150 467 3.4E-34 T 10-11-2016 CJM129_RS03855 6cee9549f72c926cf803a2add6da688a 475 SUPERFAMILY SSF53623 154 350 1.96E-28 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS03855 6cee9549f72c926cf803a2add6da688a 475 Pfam PF08245 Mur ligase middle domain 160 333 4.8E-20 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS03855 6cee9549f72c926cf803a2add6da688a 475 PANTHER PTHR23135:SF3 150 467 3.4E-34 T 10-11-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS03855 6cee9549f72c926cf803a2add6da688a 475 Gene3D G3DSA:3.40.1190.10 147 347 1.1E-34 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS01550 5e18820caf3cd10f60a3d57c1c75dd89 358 Gene3D G3DSA:3.90.1150.10 254 355 1.4E-38 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS01550 5e18820caf3cd10f60a3d57c1c75dd89 358 PIRSF PIRSF000525 1 358 7.4E-144 T 10-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CJM129_RS01550 5e18820caf3cd10f60a3d57c1c75dd89 358 PANTHER PTHR21152 2 354 6.5E-145 T 10-11-2016 CJM129_RS01550 5e18820caf3cd10f60a3d57c1c75dd89 358 Pfam PF00266 Aminotransferase class-V 5 346 2.4E-38 T 10-11-2016 IPR000192 Aminotransferase class V domain CJM129_RS01550 5e18820caf3cd10f60a3d57c1c75dd89 358 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 357 45.26 T 10-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CJM129_RS01550 5e18820caf3cd10f60a3d57c1c75dd89 358 PANTHER PTHR21152:SF1 2 354 6.5E-145 T 10-11-2016 CJM129_RS01550 5e18820caf3cd10f60a3d57c1c75dd89 358 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 357 8.7E-153 T 10-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 CJM129_RS01550 5e18820caf3cd10f60a3d57c1c75dd89 358 Gene3D G3DSA:3.40.640.10 16 253 7.9E-84 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS01550 5e18820caf3cd10f60a3d57c1c75dd89 358 SUPERFAMILY SSF53383 3 356 5.4E-99 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS08250 865c302aa7f9e09b022e3d9c082d33b5 101 Gene3D G3DSA:1.10.10.10 3 100 2.1E-33 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS08250 865c302aa7f9e09b022e3d9c082d33b5 101 PANTHER PTHR33204:SF2 1 99 1.2E-30 T 10-11-2016 CJM129_RS08250 865c302aa7f9e09b022e3d9c082d33b5 101 Pfam PF01638 HxlR-like helix-turn-helix 16 100 2.7E-24 T 10-11-2016 IPR002577 Helix-turn-helix, HxlR type CJM129_RS08250 865c302aa7f9e09b022e3d9c082d33b5 101 PANTHER PTHR33204 1 99 1.2E-30 T 10-11-2016 CJM129_RS08250 865c302aa7f9e09b022e3d9c082d33b5 101 SUPERFAMILY SSF46785 2 99 4.03E-26 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS06195 4e255154df5511d985a4c607f3349567 165 PANTHER PTHR32089 1 124 4.6E-15 T 10-11-2016 CJM129_RS06195 4e255154df5511d985a4c607f3349567 165 Gene3D G3DSA:3.30.450.20 12 108 6.6E-19 T 10-11-2016 CJM129_RS06195 4e255154df5511d985a4c607f3349567 165 PANTHER PTHR32089:SF52 1 124 4.6E-15 T 10-11-2016 CJM129_RS06195 4e255154df5511d985a4c607f3349567 165 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 107 3.7E-10 T 10-11-2016 IPR000014 PAS domain CJM129_RS06195 4e255154df5511d985a4c607f3349567 165 Pfam PF08447 PAS fold 23 107 5.3E-12 T 10-11-2016 IPR013655 PAS fold-3 GO:0005515 CJM129_RS06195 4e255154df5511d985a4c607f3349567 165 SUPERFAMILY SSF55785 15 109 1.1E-23 T 10-11-2016 IPR000014 PAS domain CJM129_RS05965 d2182d84df1dbcc607cd5428724f0a30 374 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 335 1.4E-72 T 10-11-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CJM129_RS05965 d2182d84df1dbcc607cd5428724f0a30 374 SUPERFAMILY SSF53756 2 367 7.18E-85 T 10-11-2016 CJM129_RS05965 d2182d84df1dbcc607cd5428724f0a30 374 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 2 334 3.4E-122 T 10-11-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 CJM129_RS05965 d2182d84df1dbcc607cd5428724f0a30 374 Gene3D G3DSA:3.40.50.2000 2 200 4.8E-46 T 10-11-2016 CJM129_RS05965 d2182d84df1dbcc607cd5428724f0a30 374 Gene3D G3DSA:3.40.50.2000 201 327 9.9E-10 T 10-11-2016 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 SUPERFAMILY SSF81301 217 372 3.11E-51 T 10-11-2016 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 Gene3D G3DSA:3.10.20.30 417 479 5.6E-12 T 10-11-2016 IPR012675 Beta-grasp domain CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 PANTHER PTHR21262 36 726 3.7E-173 T 10-11-2016 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 Pfam PF13328 HD domain 43 200 8.9E-39 T 10-11-2016 IPR003607 HD/PDEase domain CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 SUPERFAMILY SSF109604 38 215 8.63E-56 T 10-11-2016 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 50 712 4.4E-190 T 10-11-2016 IPR004811 RelA/SpoT family GO:0015969 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 Pfam PF04607 Region found in RelA / SpoT proteins 263 372 4.8E-34 T 10-11-2016 IPR007685 RelA/SpoT GO:0015969 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 Gene3D G3DSA:3.30.70.260 650 714 2.9E-5 T 10-11-2016 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 Pfam PF02824 TGS domain 418 476 7.8E-17 T 10-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 Pfam PF01842 ACT domain 652 715 6.9E-8 T 10-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 SMART SM00471 58 178 4.0E-7 T 10-11-2016 IPR003607 HD/PDEase domain CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 PANTHER PTHR21262:SF0 36 726 3.7E-173 T 10-11-2016 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 SUPERFAMILY SSF55021 645 720 3.49E-9 T 10-11-2016 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 SUPERFAMILY SSF81271 406 476 7.85E-17 T 10-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 SMART SM00954 263 372 9.8E-59 T 10-11-2016 IPR007685 RelA/SpoT GO:0015969 CJM129_RS06610 0e172941ee0abac94f93a97508822edb 731 Gene3D G3DSA:3.30.460.10 203 351 4.6E-38 T 10-11-2016 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 3.8E-20 T 10-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 SUPERFAMILY SSF53738 2 181 3.26E-47 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 8.6E-13 T 10-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 8.6E-13 T 10-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 8.6E-13 T 10-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 SUPERFAMILY SSF53738 259 365 1.02E-27 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 SUPERFAMILY SSF53738 157 257 2.47E-27 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 Gene3D G3DSA:3.40.120.10 252 365 6.1E-34 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 442 42.037 T 10-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 SUPERFAMILY SSF55957 359 444 2.62E-12 T 10-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 Gene3D G3DSA:3.30.310.50 366 438 9.2E-9 T 10-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 10-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 PANTHER PTHR22573 1 437 7.4E-135 T 10-11-2016 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 437 7.1E-157 T 10-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 PANTHER PTHR22573:SF15 1 437 7.4E-135 T 10-11-2016 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 Gene3D G3DSA:3.40.120.10 2 146 1.5E-45 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 Gene3D G3DSA:3.40.120.10 177 251 4.1E-25 T 10-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 2.9E-31 T 10-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS01715 5a0d3e2557e55db95544d883f3e746f1 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 133 2.3E-44 T 10-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 10-11-2016 IPR020070 Ribosomal protein L9, N-terminal CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 4.5E-40 T 10-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 Gene3D G3DSA:3.10.430.100 62 147 5.1E-24 T 10-11-2016 IPR020069 Ribosomal protein L9, C-terminal CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 PANTHER PTHR21368:SF18 1 147 1.6E-32 T 10-11-2016 CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 PANTHER PTHR21368 1 147 1.6E-32 T 10-11-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 23.147 T 10-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 2.9E-19 T 10-11-2016 IPR020070 Ribosomal protein L9, N-terminal CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 4.1E-22 T 10-11-2016 IPR020069 Ribosomal protein L9, C-terminal CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 Gene3D G3DSA:3.40.5.10 1 52 2.6E-21 T 10-11-2016 IPR020070 Ribosomal protein L9, N-terminal CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 SUPERFAMILY SSF55653 61 146 2.75E-20 T 10-11-2016 IPR020069 Ribosomal protein L9, C-terminal CJM129_RS03215 445a50533836eaa505e9881630b679a4 147 SUPERFAMILY SSF55658 1 55 4.19E-16 T 10-11-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CJM129_RS08460 6cf165bad349e3fd8d461dfe60d9478c 195 Gene3D G3DSA:3.40.50.880 1 192 1.6E-58 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS08460 6cf165bad349e3fd8d461dfe60d9478c 195 PIRSF PIRSF000495 1 194 1.8E-60 T 10-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CJM129_RS08460 6cf165bad349e3fd8d461dfe60d9478c 195 Pfam PF00117 Glutamine amidotransferase class-I 25 184 2.7E-18 T 10-11-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CJM129_RS08460 6cf165bad349e3fd8d461dfe60d9478c 195 SUPERFAMILY SSF52317 3 193 1.58E-46 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS08460 6cf165bad349e3fd8d461dfe60d9478c 195 PANTHER PTHR21235 3 194 4.1E-64 T 10-11-2016 CJM129_RS08460 6cf165bad349e3fd8d461dfe60d9478c 195 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 192 9.5E-60 T 10-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CJM129_RS08460 6cf165bad349e3fd8d461dfe60d9478c 195 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 193 31.495 T 10-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CJM129_RS08460 6cf165bad349e3fd8d461dfe60d9478c 195 PANTHER PTHR21235:SF1 3 194 4.1E-64 T 10-11-2016 CJM129_RS00050 91c34b3315ad6e7cec16de8253445f54 79 SUPERFAMILY SSF47781 17 78 3.34E-26 T 10-11-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CJM129_RS00050 91c34b3315ad6e7cec16de8253445f54 79 PANTHER PTHR21180 7 78 3.5E-24 T 10-11-2016 CJM129_RS00050 91c34b3315ad6e7cec16de8253445f54 79 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 18 78 1.5E-22 T 10-11-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CJM129_RS00050 91c34b3315ad6e7cec16de8253445f54 79 Pfam PF12836 Helix-hairpin-helix motif 18 77 7.6E-23 T 10-11-2016 CJM129_RS00050 91c34b3315ad6e7cec16de8253445f54 79 SMART SM00278 56 75 0.23 T 10-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CJM129_RS00050 91c34b3315ad6e7cec16de8253445f54 79 SMART SM00278 27 46 0.014 T 10-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CJM129_RS00050 91c34b3315ad6e7cec16de8253445f54 79 Gene3D G3DSA:1.10.150.280 16 79 5.3E-25 T 10-11-2016 CJM129_RS02995 d842fb3a6f2199d9cd05c8197ccae30e 438 Pfam PF01554 MatE 237 396 5.1E-16 T 10-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS02995 d842fb3a6f2199d9cd05c8197ccae30e 438 Pfam PF01554 MatE 14 173 9.0E-23 T 10-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS02995 d842fb3a6f2199d9cd05c8197ccae30e 438 PANTHER PTHR11206 1 437 1.6E-101 T 10-11-2016 CJM129_RS02995 d842fb3a6f2199d9cd05c8197ccae30e 438 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 409 1.9E-45 T 10-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS02995 d842fb3a6f2199d9cd05c8197ccae30e 438 PANTHER PTHR11206:SF48 1 437 1.6E-101 T 10-11-2016 CJM129_RS05740 9ff57c9aa3f9c4047656f3dfed553c77 441 Gene3D G3DSA:3.60.110.10 227 410 8.3E-6 T 10-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJM129_RS05740 9ff57c9aa3f9c4047656f3dfed553c77 441 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 23 441 12.869 T 10-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 CJM129_RS05740 9ff57c9aa3f9c4047656f3dfed553c77 441 PANTHER PTHR23088:SF29 235 396 2.8E-17 T 10-11-2016 CJM129_RS05740 9ff57c9aa3f9c4047656f3dfed553c77 441 SUPERFAMILY SSF56317 227 411 1.22E-17 T 10-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJM129_RS05740 9ff57c9aa3f9c4047656f3dfed553c77 441 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 76 423 2.8E-85 T 10-11-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 CJM129_RS05740 9ff57c9aa3f9c4047656f3dfed553c77 441 PANTHER PTHR23088 235 396 2.8E-17 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 138 768 5.5E-183 T 10-11-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 Gene3D G3DSA:3.20.70.20 124 334 7.7E-74 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 Gene3D G3DSA:3.20.70.20 649 770 7.7E-74 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 Gene3D G3DSA:3.20.70.20 385 431 7.7E-74 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 Gene3D G3DSA:3.20.70.20 493 593 7.7E-74 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 Pfam PF02867 Ribonucleotide reductase, barrel domain 213 765 1.6E-169 T 10-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 638 660 - T 10-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PANTHER PTHR11573:SF6 3 435 1.2E-283 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 135 208 1.8E-24 T 10-11-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PANTHER PTHR11573 492 770 1.2E-283 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PANTHER PTHR11573 3 435 1.2E-283 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 Pfam PF03477 ATP cone domain 1 88 9.7E-19 T 10-11-2016 IPR005144 ATP-cone domain CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 SUPERFAMILY SSF51998 212 445 4.81E-173 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 SUPERFAMILY SSF51998 490 770 4.81E-173 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PANTHER PTHR11573:SF6 492 770 1.2E-283 T 10-11-2016 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 288 307 1.9E-42 T 10-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 545 567 1.9E-42 T 10-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 596 1.9E-42 T 10-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 419 430 1.9E-42 T 10-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 507 530 1.9E-42 T 10-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 PRINTS PR01183 Ribonucleotide reductase large chain signature 649 676 1.9E-42 T 10-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJM129_RS00115 5b7e51f5e6e32d6eb69c3018bd42fe17 789 SUPERFAMILY SSF48168 6 211 3.14E-67 T 10-11-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 CJM129_RS04170 817eef1cf263b44742fdbbc093abc982 354 Pfam PF00589 Phage integrase family 167 337 3.3E-35 T 10-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJM129_RS04170 817eef1cf263b44742fdbbc093abc982 354 SUPERFAMILY SSF56349 65 342 2.88E-43 T 10-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJM129_RS04170 817eef1cf263b44742fdbbc093abc982 354 Gene3D G3DSA:1.10.443.10 167 342 1.5E-44 T 10-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJM129_RS04170 817eef1cf263b44742fdbbc093abc982 354 PANTHER PTHR30349:SF5 73 342 3.2E-37 T 10-11-2016 CJM129_RS04170 817eef1cf263b44742fdbbc093abc982 354 PANTHER PTHR30349 73 342 3.2E-37 T 10-11-2016 CJM129_RS00245 7469d9da31f96718eb0e54113d5837f3 239 ProSitePatterns PS00550 Hemerythrin family signature. 62 85 - T 10-11-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 CJM129_RS00245 7469d9da31f96718eb0e54113d5837f3 239 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 131 1.6E-29 T 10-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CJM129_RS00245 7469d9da31f96718eb0e54113d5837f3 239 SUPERFAMILY SSF47188 3 131 3.4E-23 T 10-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CJM129_RS00245 7469d9da31f96718eb0e54113d5837f3 239 Gene3D G3DSA:1.20.120.50 2 131 1.1E-25 T 10-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CJM129_RS00245 7469d9da31f96718eb0e54113d5837f3 239 Pfam PF01814 Hemerythrin HHE cation binding domain 16 125 5.4E-8 T 10-11-2016 IPR012312 Haemerythrin-like CJM129_RS00245 7469d9da31f96718eb0e54113d5837f3 239 PANTHER PTHR37164 1 147 1.7E-15 T 10-11-2016 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 PANTHER PTHR22855:SF42 6 311 3.2E-106 T 10-11-2016 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 Gene3D G3DSA:3.90.226.10 51 266 1.1E-45 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 309 2.7E-136 T 10-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 190 199 3.5E-45 T 10-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 124 3.5E-45 T 10-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 127 143 3.5E-45 T 10-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 146 159 3.5E-45 T 10-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 92 3.5E-45 T 10-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 162 175 3.5E-45 T 10-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 PANTHER PTHR22855 6 311 3.2E-106 T 10-11-2016 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 309 45.13 T 10-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 SUPERFAMILY SSF52096 32 309 1.42E-87 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS02155 eb3de9270145aa3cdd1276884f3b3cf2 312 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 141 2.1E-49 T 10-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 PANTHER PTHR21256 9 206 5.5E-103 T 10-11-2016 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 SUPERFAMILY SSF101386 117 206 5.67E-24 T 10-11-2016 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 9 206 37.299 T 10-11-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 106 9.6E-30 T 10-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 119 205 4.9E-15 T 10-11-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 106 1.0E-24 T 10-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 PANTHER PTHR21256:SF16 9 206 5.5E-103 T 10-11-2016 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 18.56 T 10-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 118 201 5.6E-31 T 10-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 CJM129_RS08480 2228274ad1f5d5aef1585d682aa00142 207 SUPERFAMILY SSF141734 8 117 3.01E-44 T 10-11-2016 CJM129_RS01785 157c757a9d0942bab18e3efac0063be3 163 SUPERFAMILY SSF89963 93 163 2.43E-21 T 10-11-2016 IPR007551 Protein of unknown function DUF520 CJM129_RS01785 157c757a9d0942bab18e3efac0063be3 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 23.871 T 10-11-2016 IPR007551 Protein of unknown function DUF520 CJM129_RS01785 157c757a9d0942bab18e3efac0063be3 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 2.5E-49 T 10-11-2016 IPR007551 Protein of unknown function DUF520 CJM129_RS01785 157c757a9d0942bab18e3efac0063be3 163 PANTHER PTHR30476 3 161 2.2E-47 T 10-11-2016 CJM129_RS01785 157c757a9d0942bab18e3efac0063be3 163 PANTHER PTHR30476:SF0 3 161 2.2E-47 T 10-11-2016 CJM129_RS01785 157c757a9d0942bab18e3efac0063be3 163 SUPERFAMILY SSF89963 5 83 1.02E-22 T 10-11-2016 IPR007551 Protein of unknown function DUF520 CJM129_RS01785 157c757a9d0942bab18e3efac0063be3 163 Gene3D G3DSA:3.30.70.990 13 97 3.9E-24 T 10-11-2016 CJM129_RS01785 157c757a9d0942bab18e3efac0063be3 163 Gene3D G3DSA:3.30.70.860 98 163 1.5E-24 T 10-11-2016 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 PANTHER PTHR21198:SF2 2 246 2.9E-72 T 10-11-2016 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 209 7.2E-34 T 10-11-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 176 186 - T 10-11-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 SUPERFAMILY SSF53681 108 246 1.46E-27 T 10-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 Hamap MF_00258 Glutamate racemase [murI]. 1 247 32.184 T 10-11-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 245 6.3E-70 T 10-11-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 Gene3D G3DSA:3.40.50.1860 2 170 1.8E-49 T 10-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 SUPERFAMILY SSF53681 2 102 1.86E-32 T 10-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 PANTHER PTHR21198 2 246 2.9E-72 T 10-11-2016 CJM129_RS08740 66b43eb248b92af685bd9599ade4b20d 247 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 67 75 - T 10-11-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 SMART SM00086 95 137 3.4 T 10-11-2016 IPR001610 PAC motif CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 SMART SM00086 217 259 0.021 T 10-11-2016 IPR001610 PAC motif CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 Pfam PF13426 PAS domain 156 258 4.8E-13 T 10-11-2016 IPR000014 PAS domain CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 289 428 2.3E-40 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 PANTHER PTHR24422:SF12 7 429 2.1E-138 T 10-11-2016 CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 Gene3D G3DSA:1.10.287.950 255 428 3.7E-50 T 10-11-2016 CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 SUPERFAMILY SSF55785 33 137 1.22E-19 T 10-11-2016 IPR000014 PAS domain CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 SMART SM00283 248 429 5.6E-13 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 SUPERFAMILY SSF55785 152 256 2.09E-21 T 10-11-2016 IPR000014 PAS domain CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 Gene3D G3DSA:3.30.450.20 155 254 1.3E-19 T 10-11-2016 CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 Gene3D G3DSA:3.30.450.20 34 136 1.0E-16 T 10-11-2016 CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 SUPERFAMILY SSF58104 233 427 1.57E-56 T 10-11-2016 CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 138 4.2E-9 T 10-11-2016 IPR000014 PAS domain CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 154 264 4.4E-7 T 10-11-2016 IPR000014 PAS domain CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 Pfam PF08447 PAS fold 45 130 1.6E-8 T 10-11-2016 IPR013655 PAS fold-3 GO:0005515 CJM129_RS05815 4b30c934703065c5e0808bf5e752042d 429 PANTHER PTHR24422 7 429 2.1E-138 T 10-11-2016 CJM129_RS06120 f38bed4fb4e8349c2a6cc0e0761e8845 102 SUPERFAMILY SSF103481 6 101 1.44E-18 T 10-11-2016 CJM129_RS06120 f38bed4fb4e8349c2a6cc0e0761e8845 102 Pfam PF00893 Small Multidrug Resistance protein 2 93 1.9E-20 T 10-11-2016 IPR000390 Small multidrug resistance protein family GO:0016021 CJM129_RS06120 f38bed4fb4e8349c2a6cc0e0761e8845 102 PANTHER PTHR30561 1 101 1.0E-20 T 10-11-2016 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 PRINTS PR01005 Flagellar hook-associated protein signature 126 146 1.1E-10 T 10-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 PRINTS PR01005 Flagellar hook-associated protein signature 51 73 1.1E-10 T 10-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 PRINTS PR01005 Flagellar hook-associated protein signature 159 183 1.1E-10 T 10-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 1.1E-10 T 10-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 SUPERFAMILY SSF64518 530 606 2.62E-7 T 10-11-2016 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 SUPERFAMILY SSF64518 142 306 2.62E-7 T 10-11-2016 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 SUPERFAMILY SSF64518 383 475 2.62E-7 T 10-11-2016 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 PANTHER PTHR30033 1 608 1.5E-63 T 10-11-2016 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 Pfam PF00460 Flagella basal body rod protein 7 34 2.4E-5 T 10-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 548 606 2.4E-13 T 10-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 PANTHER PTHR30033:SF1 1 608 1.5E-63 T 10-11-2016 CJM129_RS07810 3abfefcfe52b2b860dfc93be59e196d6 608 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 423 1.5E-93 T 10-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CJM129_RS06565 65b9340824400232cf31590512b2efa3 190 SUPERFAMILY SSF111304 5 190 7.98E-60 T 10-11-2016 IPR023627 Recombination protein RecR CJM129_RS06565 65b9340824400232cf31590512b2efa3 190 Pfam PF02132 RecR protein 41 79 1.0E-12 T 10-11-2016 IPR023628 Recombination protein RecR, C4-type zinc finger CJM129_RS06565 65b9340824400232cf31590512b2efa3 190 PANTHER PTHR30446:SF0 2 190 7.1E-55 T 10-11-2016 CJM129_RS06565 65b9340824400232cf31590512b2efa3 190 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 10-11-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CJM129_RS06565 65b9340824400232cf31590512b2efa3 190 Pfam PF13662 Toprim domain 82 158 2.9E-7 T 10-11-2016 IPR006171 Toprim domain CJM129_RS06565 65b9340824400232cf31590512b2efa3 190 PANTHER PTHR30446 2 190 7.1E-55 T 10-11-2016 CJM129_RS06565 65b9340824400232cf31590512b2efa3 190 TIGRFAM TIGR00615 recR: recombination protein RecR 6 187 1.4E-54 T 10-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CJM129_RS06565 65b9340824400232cf31590512b2efa3 190 Hamap MF_00017 Recombination protein RecR [recR]. 1 190 59.719 T 10-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CJM129_RS07565 6bb1c6eab2eddb7b0e4833d8b84275b7 253 Gene3D G3DSA:3.90.550.10 1 247 3.5E-35 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07565 6bb1c6eab2eddb7b0e4833d8b84275b7 253 SUPERFAMILY SSF53448 1 248 5.86E-40 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07565 6bb1c6eab2eddb7b0e4833d8b84275b7 253 Pfam PF00483 Nucleotidyl transferase 3 126 2.3E-12 T 10-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CJM129_RS07565 6bb1c6eab2eddb7b0e4833d8b84275b7 253 PANTHER PTHR22572 2 67 4.7E-21 T 10-11-2016 CJM129_RS08205 19e59ae38c1129475a7166de79e8e1ed 113 Pfam PF01638 HxlR-like helix-turn-helix 21 110 1.5E-27 T 10-11-2016 IPR002577 Helix-turn-helix, HxlR type CJM129_RS08205 19e59ae38c1129475a7166de79e8e1ed 113 SUPERFAMILY SSF46785 9 107 1.85E-28 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS08205 19e59ae38c1129475a7166de79e8e1ed 113 PANTHER PTHR33204 1 107 3.6E-47 T 10-11-2016 CJM129_RS08205 19e59ae38c1129475a7166de79e8e1ed 113 PANTHER PTHR33204:SF12 1 107 3.6E-47 T 10-11-2016 CJM129_RS08205 19e59ae38c1129475a7166de79e8e1ed 113 Gene3D G3DSA:1.10.10.10 7 110 5.6E-36 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS09035 196853eddfad3cd1454e2988ab90cf87 181 PANTHER PTHR11994:SF4 1 179 9.2E-73 T 10-11-2016 CJM129_RS09035 196853eddfad3cd1454e2988ab90cf87 181 PIRSF PIRSF002161 1 181 6.0E-65 T 10-11-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09035 196853eddfad3cd1454e2988ab90cf87 181 SUPERFAMILY SSF55282 1 178 1.77E-68 T 10-11-2016 IPR022803 Ribosomal protein L5 domain CJM129_RS09035 196853eddfad3cd1454e2988ab90cf87 181 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 40.149 T 10-11-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09035 196853eddfad3cd1454e2988ab90cf87 181 Gene3D G3DSA:3.30.1440.10 2 178 1.3E-67 T 10-11-2016 IPR022803 Ribosomal protein L5 domain CJM129_RS09035 196853eddfad3cd1454e2988ab90cf87 181 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 10-11-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09035 196853eddfad3cd1454e2988ab90cf87 181 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.5E-37 T 10-11-2016 IPR031309 Ribosomal protein L5, C-terminal CJM129_RS09035 196853eddfad3cd1454e2988ab90cf87 181 PANTHER PTHR11994 1 179 9.2E-73 T 10-11-2016 CJM129_RS09035 196853eddfad3cd1454e2988ab90cf87 181 Pfam PF00281 Ribosomal protein L5 24 80 1.2E-20 T 10-11-2016 IPR031310 Ribosomal protein L5, N-terminal CJM129_RS01725 c62439b7b6d210c85c93b03423cf3a67 150 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 150 2.3E-53 T 10-11-2016 IPR005265 Uncharacterised protein family UPF0093 CJM129_RS01725 c62439b7b6d210c85c93b03423cf3a67 150 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 8 150 3.1E-47 T 10-11-2016 IPR014351 Conserved hypothetical protein CHP00701 CJM129_RS01725 c62439b7b6d210c85c93b03423cf3a67 150 PANTHER PTHR40255 7 150 3.7E-37 T 10-11-2016 CJM129_RS01725 c62439b7b6d210c85c93b03423cf3a67 150 PIRSF PIRSF004638 2 150 1.9E-54 T 10-11-2016 IPR005265 Uncharacterised protein family UPF0093 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 PANTHER PTHR11751 12 388 1.2E-153 T 10-11-2016 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 Gene3D G3DSA:3.90.1150.10 273 388 3.9E-46 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 PANTHER PTHR11751:SF306 12 388 1.2E-153 T 10-11-2016 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 Pfam PF00155 Aminotransferase class I and II 30 381 1.6E-69 T 10-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 196 219 3.8E-13 T 10-11-2016 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 113 134 3.8E-13 T 10-11-2016 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 227 251 3.8E-13 T 10-11-2016 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 160 184 3.8E-13 T 10-11-2016 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 91 111 3.8E-13 T 10-11-2016 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 Gene3D G3DSA:3.40.640.10 43 272 1.1E-66 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS03690 66b805eca048749acd5fae12887eef0e 388 SUPERFAMILY SSF53383 6 387 1.9E-111 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 SMART SM00883 2 85 1.2E-42 T 10-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 Hamap MF_00580 10 kDa chaperonin [groS]. 2 86 21.413 T 10-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 SUPERFAMILY SSF50129 1 85 4.04E-27 T 10-11-2016 IPR011032 GroES-like CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 PANTHER PTHR10772 1 85 4.6E-31 T 10-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 Gene3D G3DSA:2.30.33.40 1 85 2.0E-27 T 10-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 PRINTS PR00297 10kDa chaperonin signature 72 85 4.4E-24 T 10-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 PRINTS PR00297 10kDa chaperonin signature 25 46 4.4E-24 T 10-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 PRINTS PR00297 10kDa chaperonin signature 3 18 4.4E-24 T 10-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 PRINTS PR00297 10kDa chaperonin signature 51 63 4.4E-24 T 10-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJM129_RS06350 fb00172fbd1ecfc60e66ea9768025d39 86 Pfam PF00166 Chaperonin 10 Kd subunit 2 84 4.2E-27 T 10-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJM129_RS04585 170f2492599e855477a6eec84c1ed613 447 SMART SM00382 10 215 0.002 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS04585 170f2492599e855477a6eec84c1ed613 447 Gene3D G3DSA:3.40.50.300 350 400 1.6E-20 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04585 170f2492599e855477a6eec84c1ed613 447 Gene3D G3DSA:3.40.50.300 141 244 1.6E-20 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04585 170f2492599e855477a6eec84c1ed613 447 SUPERFAMILY SSF52540 127 412 2.52E-31 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04585 170f2492599e855477a6eec84c1ed613 447 Pfam PF02689 Helicase 351 406 1.7E-7 T 10-11-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 CJM129_RS04585 170f2492599e855477a6eec84c1ed613 447 SUPERFAMILY SSF52540 6 166 8.16E-20 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04585 170f2492599e855477a6eec84c1ed613 447 PANTHER PTHR23274 8 434 1.8E-73 T 10-11-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 CJM129_RS04585 170f2492599e855477a6eec84c1ed613 447 Gene3D G3DSA:3.40.50.300 5 140 3.9E-11 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04585 170f2492599e855477a6eec84c1ed613 447 Pfam PF05970 PIF1-like helicase 13 182 3.7E-26 T 10-11-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 CJM129_RS07090 c08599231c02674157ce1956faa2f411 323 PANTHER PTHR10366:SF253 3 309 3.3E-123 T 10-11-2016 CJM129_RS07090 c08599231c02674157ce1956faa2f411 323 Gene3D G3DSA:3.90.25.10 187 317 3.5E-31 T 10-11-2016 CJM129_RS07090 c08599231c02674157ce1956faa2f411 323 PANTHER PTHR10366 3 309 3.3E-123 T 10-11-2016 CJM129_RS07090 c08599231c02674157ce1956faa2f411 323 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 304 1.9E-72 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07090 c08599231c02674157ce1956faa2f411 323 SUPERFAMILY SSF51735 3 317 2.65E-89 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07090 c08599231c02674157ce1956faa2f411 323 Gene3D G3DSA:3.40.50.720 3 186 2.7E-62 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00805 b0901455ce084afa494e159a67d8c6d5 193 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 4.7E-28 T 10-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CJM129_RS00805 b0901455ce084afa494e159a67d8c6d5 193 PANTHER PTHR12589 3 152 1.0E-17 T 10-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CJM129_RS00805 b0901455ce084afa494e159a67d8c6d5 193 PANTHER PTHR12589:SF5 3 152 1.0E-17 T 10-11-2016 CJM129_RS00805 b0901455ce084afa494e159a67d8c6d5 193 Gene3D G3DSA:3.30.479.10 1 146 4.3E-32 T 10-11-2016 CJM129_RS00805 b0901455ce084afa494e159a67d8c6d5 193 SUPERFAMILY SSF55620 1 146 7.78E-34 T 10-11-2016 CJM129_RS06250 d00f6fff4e7823a07484a400483bd2d1 256 PANTHER PTHR30429 1 256 1.7E-104 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS06250 d00f6fff4e7823a07484a400483bd2d1 256 PIRSF PIRSF002854 2 256 7.4E-92 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS06250 d00f6fff4e7823a07484a400483bd2d1 256 Gene3D G3DSA:3.40.190.10 21 149 9.3E-48 T 10-11-2016 CJM129_RS06250 d00f6fff4e7823a07484a400483bd2d1 256 SUPERFAMILY SSF53850 23 256 1.97E-72 T 10-11-2016 CJM129_RS06250 d00f6fff4e7823a07484a400483bd2d1 256 Pfam PF03180 NLPA lipoprotein 24 256 3.2E-80 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 276 1.8E-123 T 10-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 279 37.769 T 10-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 7.3E-38 T 10-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 7.3E-38 T 10-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 7.3E-38 T 10-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 7.3E-38 T 10-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 7.3E-38 T 10-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 PANTHER PTHR22855:SF17 1 278 4.0E-136 T 10-11-2016 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 Gene3D G3DSA:3.90.226.10 21 278 3.9E-70 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 PANTHER PTHR22855 1 278 4.0E-136 T 10-11-2016 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 Pfam PF01039 Carboxyl transferase domain 59 238 6.9E-21 T 10-11-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 CJM129_RS00645 e3e511dd3c117651d7913479c6873457 280 SUPERFAMILY SSF52096 24 276 1.08E-77 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS08880 cba00bc0c95a6d4d6b513a74aea95bea 75 Gene3D G3DSA:3.30.920.30 18 70 3.9E-12 T 10-11-2016 CJM129_RS08880 cba00bc0c95a6d4d6b513a74aea95bea 75 SUPERFAMILY SSF54786 19 71 1.37E-10 T 10-11-2016 CJM129_RS08880 cba00bc0c95a6d4d6b513a74aea95bea 75 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 23 70 1.1E-11 T 10-11-2016 IPR012933 HicA mRNA interferase family GO:0003729 CJM129_RS08340 beb013f7b35983691a3bf2e5df646cef 408 PANTHER PTHR11993 17 403 1.2E-183 T 10-11-2016 CJM129_RS08340 beb013f7b35983691a3bf2e5df646cef 408 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 136 408 3.8E-108 T 10-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 CJM129_RS08340 beb013f7b35983691a3bf2e5df646cef 408 SUPERFAMILY SSF56762 32 408 7.33E-130 T 10-11-2016 IPR029014 NiFe hydrogenase-like CJM129_RS08340 beb013f7b35983691a3bf2e5df646cef 408 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 17 408 46.354 T 10-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 CJM129_RS08340 beb013f7b35983691a3bf2e5df646cef 408 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 22 408 2.5E-191 T 10-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 CJM129_RS08340 beb013f7b35983691a3bf2e5df646cef 408 Gene3D G3DSA:1.10.645.10 12 247 1.3E-54 T 10-11-2016 IPR029014 NiFe hydrogenase-like CJM129_RS08340 beb013f7b35983691a3bf2e5df646cef 408 Gene3D G3DSA:1.10.645.10 248 394 3.0E-17 T 10-11-2016 IPR029014 NiFe hydrogenase-like CJM129_RS08340 beb013f7b35983691a3bf2e5df646cef 408 PANTHER PTHR11993:SF28 17 403 1.2E-183 T 10-11-2016 CJM129_RS08050 72481688724dba7fd82eaf706c61eb24 382 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 245 357 1.1E-8 T 10-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS08050 72481688724dba7fd82eaf706c61eb24 382 PIRSF PIRSF038941 1 382 2.6E-157 T 10-11-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 CJM129_RS08050 72481688724dba7fd82eaf706c61eb24 382 Gene3D G3DSA:2.40.37.10 234 360 3.1E-23 T 10-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS08050 72481688724dba7fd82eaf706c61eb24 382 SUPERFAMILY SSF50621 209 372 2.3E-27 T 10-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS08050 72481688724dba7fd82eaf706c61eb24 382 Gene3D G3DSA:3.20.20.10 21 233 1.8E-17 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS08050 72481688724dba7fd82eaf706c61eb24 382 PANTHER PTHR11482:SF38 1 381 1.9E-148 T 10-11-2016 CJM129_RS08050 72481688724dba7fd82eaf706c61eb24 382 PANTHER PTHR11482 1 381 1.9E-148 T 10-11-2016 CJM129_RS08050 72481688724dba7fd82eaf706c61eb24 382 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 382 5.9E-192 T 10-11-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 CJM129_RS08050 72481688724dba7fd82eaf706c61eb24 382 SUPERFAMILY SSF51419 15 243 2.47E-42 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS01220 8daa0ad792ebfc4fcb11a5ac01f1efc3 157 Gene3D G3DSA:3.30.70.640 2 156 1.1E-62 T 10-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CJM129_RS01220 8daa0ad792ebfc4fcb11a5ac01f1efc3 157 PANTHER PTHR22960 3 157 1.3E-79 T 10-11-2016 CJM129_RS01220 8daa0ad792ebfc4fcb11a5ac01f1efc3 157 Pfam PF01967 MoaC family 14 149 4.1E-51 T 10-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CJM129_RS01220 8daa0ad792ebfc4fcb11a5ac01f1efc3 157 SUPERFAMILY SSF55040 11 154 3.01E-56 T 10-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 CJM129_RS01220 8daa0ad792ebfc4fcb11a5ac01f1efc3 157 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 7.7E-54 T 10-11-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 CJM129_RS01220 8daa0ad792ebfc4fcb11a5ac01f1efc3 157 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 157 34.23 T 10-11-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 CJM129_RS07860 bfbb8f298e19d74058e1e2e5634f26b7 213 Gene3D G3DSA:3.40.50.1000 75 209 1.0E-28 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS07860 bfbb8f298e19d74058e1e2e5634f26b7 213 SUPERFAMILY SSF56784 1 209 2.94E-47 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS07860 bfbb8f298e19d74058e1e2e5634f26b7 213 PANTHER PTHR18901:SF14 3 199 5.9E-42 T 10-11-2016 CJM129_RS07860 bfbb8f298e19d74058e1e2e5634f26b7 213 PANTHER PTHR18901 3 199 5.9E-42 T 10-11-2016 CJM129_RS07860 bfbb8f298e19d74058e1e2e5634f26b7 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 178 2.2E-36 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS07860 bfbb8f298e19d74058e1e2e5634f26b7 213 Gene3D G3DSA:1.10.150.240 16 74 5.9E-15 T 10-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SUPERFAMILY SSF55874 303 486 9.82E-39 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Pfam PF00072 Response regulator receiver domain 649 762 9.9E-24 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Pfam PF01584 CheW-like domain 493 621 1.8E-23 T 10-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 442 3.0E-14 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 3.0E-14 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 3.0E-14 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 3.0E-14 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 233 300 3.6E-17 T 10-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SMART SM01231 232 300 2.5E-18 T 10-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SMART SM00073 4 101 1.3E-30 T 10-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Gene3D G3DSA:2.30.30.40 488 509 6.4E-24 T 10-11-2016 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Gene3D G3DSA:2.30.30.40 575 618 6.4E-24 T 10-11-2016 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SUPERFAMILY SSF50341 487 618 8.37E-33 T 10-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SUPERFAMILY SSF47384 233 301 1.1E-12 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Gene3D G3DSA:3.40.50.2300 645 766 3.1E-35 T 10-11-2016 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SMART SM00260 480 619 1.1E-44 T 10-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SUPERFAMILY SSF47226 3 130 1.14E-31 T 10-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SUPERFAMILY SSF52172 645 767 1.85E-34 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Pfam PF01627 Hpt domain 6 99 1.3E-16 T 10-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SMART SM00448 647 762 2.3E-33 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Gene3D G3DSA:1.20.120.160 2 139 1.7E-43 T 10-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 SMART SM00387 345 488 5.2E-23 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Gene3D G3DSA:3.30.565.10 303 487 1.0E-38 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 PANTHER PTHR22617:SF6 1 635 2.5E-219 T 10-11-2016 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 487 3.2E-16 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Gene3D G3DSA:1.10.287.560 233 301 8.2E-19 T 10-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 Gene3D G3DSA:2.40.50.180 512 574 4.9E-16 T 10-11-2016 CJM129_RS01360 1b3689354d5b3f4b75c428e481d31041 769 PANTHER PTHR22617 1 635 2.5E-219 T 10-11-2016 CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 PANTHER PTHR24220 432 588 1.1E-93 T 10-11-2016 CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 SUPERFAMILY SSF52540 1 222 2.13E-64 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 PANTHER PTHR24220:SF578 3 228 1.1E-93 T 10-11-2016 CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 PANTHER PTHR24220:SF578 432 588 1.1E-93 T 10-11-2016 CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 Pfam PF02687 FtsX-like permease family 521 634 5.9E-20 T 10-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 Gene3D G3DSA:3.40.50.300 2 218 1.9E-66 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 PANTHER PTHR24220 3 228 1.1E-93 T 10-11-2016 CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 Pfam PF00005 ABC transporter 17 165 6.1E-32 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 Pfam PF12704 MacB-like periplasmic core domain 264 484 4.6E-33 T 10-11-2016 IPR025857 MacB-like periplasmic core domain CJM129_RS02940 6d8fe381b7c78adaaa69d8f6de98e7b1 641 SMART SM00382 26 213 4.2E-12 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 SUPERFAMILY SSF51269 281 343 4.24E-19 T 10-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 PANTHER PTHR23416:SF62 1 295 1.8E-82 T 10-11-2016 CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 Pfam PF08666 SAF domain 286 340 6.8E-12 T 10-11-2016 IPR013974 SAF domain CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 Pfam PF03102 NeuB family 33 271 5.7E-85 T 10-11-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 Gene3D G3DSA:3.20.20.70 6 270 6.8E-99 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 PANTHER PTHR23416 1 295 1.8E-82 T 10-11-2016 CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 SMART SM00858 285 343 7.1E-9 T 10-11-2016 IPR013974 SAF domain CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 SUPERFAMILY SSF51569 6 297 7.64E-84 T 10-11-2016 CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 11 337 1.6E-154 T 10-11-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 CJM129_RS07080 c7e55a3632f95f44e3707ec170619059 343 Gene3D G3DSA:3.90.1210.10 286 342 7.6E-26 T 10-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 PANTHER PTHR11918:SF45 3 412 1.0E-74 T 10-11-2016 CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 SUPERFAMILY SSF102114 128 357 5.36E-46 T 10-11-2016 CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 Pfam PF04055 Radical SAM superfamily 138 302 7.4E-17 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 Gene3D G3DSA:3.80.30.20 131 358 2.6E-57 T 10-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 Pfam PF00919 Uncharacterized protein family UPF0004 4 91 1.0E-17 T 10-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 PANTHER PTHR11918 3 412 1.0E-74 T 10-11-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 137 157 - T 10-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 SMART SM00729 133 346 3.1E-42 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 410 1.3E-98 T 10-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CJM129_RS04890 e60a2ae75e6f9d387d24890a925cfb01 416 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 399 1.5E-142 T 10-11-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 CJM129_RS03565 2e79ea5a91c9fe7e48c94b6d1842ca45 480 Pfam PF05860 haemagglutination activity domain 24 134 8.5E-15 T 10-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal CJM129_RS03565 2e79ea5a91c9fe7e48c94b6d1842ca45 480 SMART SM00912 22 135 7.6E-22 T 10-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal CJM129_RS03565 2e79ea5a91c9fe7e48c94b6d1842ca45 480 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 63 131 1.7E-12 T 10-11-2016 IPR008638 Filamentous haemagglutinin, N-terminal CJM129_RS03565 2e79ea5a91c9fe7e48c94b6d1842ca45 480 SUPERFAMILY SSF51126 16 221 1.54E-21 T 10-11-2016 IPR011050 Pectin lyase fold/virulence factor CJM129_RS07685 20be2ad6eaaa5b0a1020386756d82fda 483 Pfam PF01501 Glycosyl transferase family 8 3 302 6.2E-36 T 10-11-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 CJM129_RS07685 20be2ad6eaaa5b0a1020386756d82fda 483 SUPERFAMILY SSF53448 3 334 1.83E-50 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07685 20be2ad6eaaa5b0a1020386756d82fda 483 Gene3D G3DSA:3.90.550.10 2 337 8.1E-67 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07685 20be2ad6eaaa5b0a1020386756d82fda 483 PANTHER PTHR13778 112 206 2.0E-12 T 10-11-2016 CJM129_RS04360 83c2a178a04696185298ae09fa219dda 155 Gene3D G3DSA:3.40.1280.10 1 149 2.7E-52 T 10-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJM129_RS04360 83c2a178a04696185298ae09fa219dda 155 PANTHER PTHR12029:SF31 1 148 1.4E-59 T 10-11-2016 CJM129_RS04360 83c2a178a04696185298ae09fa219dda 155 PIRSF PIRSF029256 1 154 3.4E-60 T 10-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CJM129_RS04360 83c2a178a04696185298ae09fa219dda 155 Pfam PF00588 SpoU rRNA Methylase family 2 143 1.3E-33 T 10-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CJM129_RS04360 83c2a178a04696185298ae09fa219dda 155 SUPERFAMILY SSF75217 1 150 3.66E-38 T 10-11-2016 IPR029028 Alpha/beta knot methyltransferases CJM129_RS04360 83c2a178a04696185298ae09fa219dda 155 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 30.091 T 10-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CJM129_RS04360 83c2a178a04696185298ae09fa219dda 155 PANTHER PTHR12029 1 148 1.4E-59 T 10-11-2016 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 SUPERFAMILY SSF51735 102 285 3.27E-53 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 10-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 10-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 284 8.8E-56 T 10-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 Pfam PF01842 ACT domain 456 517 3.2E-11 T 10-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 PANTHER PTHR10996:SF20 2 360 4.4E-135 T 10-11-2016 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 PANTHER PTHR10996 2 360 4.4E-135 T 10-11-2016 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 Gene3D G3DSA:3.30.1330.90 322 448 6.2E-37 T 10-11-2016 IPR029009 Allosteric substrate binding domain CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 4 527 3.8E-184 T 10-11-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 SUPERFAMILY SSF55021 444 524 5.66E-15 T 10-11-2016 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 Gene3D G3DSA:3.30.70.260 449 524 5.8E-19 T 10-11-2016 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 SUPERFAMILY SSF52283 21 121 3.21E-30 T 10-11-2016 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 316 1.3E-30 T 10-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 SUPERFAMILY SSF143548 323 450 6.02E-29 T 10-11-2016 IPR029009 Allosteric substrate binding domain CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 Gene3D G3DSA:3.40.50.720 108 285 2.5E-61 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS04295 e6efd3a902c169f42964dfc7fda26f91 527 Gene3D G3DSA:3.40.50.720 1 107 8.1E-33 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS01720 ae52cac1917dc207e3aef4b058b2f48f 156 Pfam PF01252 Signal peptidase (SPase) II 15 146 6.2E-24 T 10-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CJM129_RS01720 ae52cac1917dc207e3aef4b058b2f48f 156 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 151 13.203 T 10-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CJM129_RS01720 ae52cac1917dc207e3aef4b058b2f48f 156 TIGRFAM TIGR00077 lspA: signal peptidase II 6 152 4.7E-36 T 10-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CJM129_RS01720 ae52cac1917dc207e3aef4b058b2f48f 156 PANTHER PTHR33695 6 155 2.5E-25 T 10-11-2016 CJM129_RS01720 ae52cac1917dc207e3aef4b058b2f48f 156 PANTHER PTHR33695:SF1 6 155 2.5E-25 T 10-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CJM129_RS01720 ae52cac1917dc207e3aef4b058b2f48f 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 91 106 5.6E-13 T 10-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CJM129_RS01720 ae52cac1917dc207e3aef4b058b2f48f 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 126 142 5.6E-13 T 10-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CJM129_RS01720 ae52cac1917dc207e3aef4b058b2f48f 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 47 55 5.6E-13 T 10-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CJM129_RS01720 ae52cac1917dc207e3aef4b058b2f48f 156 ProSitePatterns PS00855 Signal peptidases II signature. 94 106 - T 10-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 CJM129_RS00940 455793522d3a66a454b9aadee606081b 239 Pfam PF03741 Integral membrane protein TerC family 16 204 1.1E-52 T 10-11-2016 IPR005496 Integral membrane protein TerC GO:0016021 CJM129_RS00940 455793522d3a66a454b9aadee606081b 239 PANTHER PTHR30060 1 238 4.1E-98 T 10-11-2016 CJM129_RS00940 455793522d3a66a454b9aadee606081b 239 PANTHER PTHR30060:SF1 1 238 4.1E-98 T 10-11-2016 CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 PANTHER PTHR30195 2 580 8.7E-67 T 10-11-2016 CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 Pfam PF08463 EcoEI R protein C-terminal 611 767 9.1E-17 T 10-11-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 SUPERFAMILY SSF52540 131 367 7.21E-34 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 Pfam PF00271 Helicase conserved C-terminal domain 413 522 1.7E-5 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 Pfam PF04851 Type III restriction enzyme, res subunit 150 330 9.3E-44 T 10-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 Gene3D G3DSA:3.40.50.300 412 526 2.6E-8 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 PANTHER PTHR30195:SF3 2 580 8.7E-67 T 10-11-2016 CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 SMART SM00487 148 365 5.3E-17 T 10-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 SUPERFAMILY SSF52540 397 538 3.55E-18 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 SUPERFAMILY SSF52540 277 327 3.55E-18 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 Gene3D G3DSA:3.40.50.300 277 342 5.6E-27 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08220 9ea419cf99683c1bb14f556278674d42 769 Gene3D G3DSA:3.40.50.300 150 240 5.6E-27 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 PANTHER PTHR24423 221 426 3.1E-34 T 10-11-2016 CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 282 1.5E-8 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 SUPERFAMILY SSF47384 215 289 2.16E-9 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 427 1.3E-13 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 7.1E-6 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 7.1E-6 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 7.1E-6 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 SMART SM00388 224 291 1.6E-9 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 Gene3D G3DSA:1.10.287.130 221 273 5.9E-10 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 SMART SM00387 327 429 4.3E-17 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 SUPERFAMILY SSF55874 311 427 9.56E-24 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS04285 235b29cd6b50739650684bbb46f33cf8 429 Gene3D G3DSA:3.30.565.10 274 427 4.8E-23 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS03040 0661dc8128dee85aaea72ec0b44b3183 1145 SMART SM00869 875 1135 4.5E-7 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS03040 0661dc8128dee85aaea72ec0b44b3183 1145 SUPERFAMILY SSF103515 855 1145 4.32E-24 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS03310 2a3122acb64102884674e6b1d1b17d7f 357 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 3 352 32.344 T 10-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CJM129_RS03310 2a3122acb64102884674e6b1d1b17d7f 357 SUPERFAMILY SSF56014 259 346 5.3E-7 T 10-11-2016 CJM129_RS03310 2a3122acb64102884674e6b1d1b17d7f 357 PIRSF PIRSF004640 1 357 7.5E-144 T 10-11-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CJM129_RS03310 2a3122acb64102884674e6b1d1b17d7f 357 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 5 345 1.3E-115 T 10-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CJM129_RS03310 2a3122acb64102884674e6b1d1b17d7f 357 PANTHER PTHR30454 1 356 1.7E-159 T 10-11-2016 CJM129_RS03310 2a3122acb64102884674e6b1d1b17d7f 357 Gene3D G3DSA:3.20.20.120 64 132 5.6E-4 T 10-11-2016 IPR029065 Enolase C-terminal domain-like CJM129_RS03310 2a3122acb64102884674e6b1d1b17d7f 357 Pfam PF04551 GcpE protein 8 347 1.1E-125 T 10-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 CJM129_RS03310 2a3122acb64102884674e6b1d1b17d7f 357 SUPERFAMILY SSF51717 15 205 2.28E-8 T 10-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 917 0.0 T 10-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 PANTHER PTHR32282 1 941 0.0 T 10-11-2016 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:1.20.1580.10 399 473 7.7E-52 T 10-11-2016 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:1.20.1580.10 255 288 7.7E-52 T 10-11-2016 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:1.20.1580.10 92 130 7.7E-52 T 10-11-2016 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 ProSitePatterns PS00211 ABC transporters family signature. 822 836 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:3.40.50.300 594 660 8.5E-54 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:3.40.50.300 6 52 6.2E-52 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:3.40.50.300 474 590 6.2E-52 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:3.40.50.300 813 924 8.5E-54 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:1.10.8.280 291 398 4.8E-19 T 10-11-2016 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 PANTHER PTHR32282:SF2 1 941 0.0 T 10-11-2016 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 SUPERFAMILY SSF52540 438 565 2.31E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 SUPERFAMILY SSF52540 8 205 2.31E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 SUPERFAMILY SSF52540 610 905 2.08E-46 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:1.20.1580.10 686 812 5.5E-54 T 10-11-2016 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:3.30.1490.20 201 245 5.1E-12 T 10-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Gene3D G3DSA:3.30.1490.20 132 154 5.1E-12 T 10-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJM129_RS01630 b7862da3b22360066ef5b581415d02b0 941 Pfam PF00005 ABC transporter 616 852 2.7E-9 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 363 519 5.4E-35 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 SUPERFAMILY SSF50447 763 856 1.96E-30 T 10-11-2016 IPR009000 Translation protein, beta-barrel domain CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 859 16.677 T 10-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 2.0E-15 T 10-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 283 333 4.7E-15 T 10-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 Pfam PF00009 Elongation factor Tu GTP binding domain 364 520 1.2E-33 T 10-11-2016 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 Pfam PF11987 Translation-initiation factor 2 647 751 3.2E-37 T 10-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 Gene3D G3DSA:3.40.50.300 349 519 4.3E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 SUPERFAMILY SSF50447 533 615 2.07E-18 T 10-11-2016 IPR009000 Translation protein, beta-barrel domain CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 ProSitePatterns PS01176 Initiation factor 2 signature. 812 834 - T 10-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 278 860 3.7E-251 T 10-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 Gene3D G3DSA:2.40.30.10 764 858 7.6E-36 T 10-11-2016 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 PANTHER PTHR23115:SF184 714 857 8.6E-184 T 10-11-2016 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 PANTHER PTHR23115 339 688 8.6E-184 T 10-11-2016 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 PANTHER PTHR23115 714 857 8.6E-184 T 10-11-2016 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 SUPERFAMILY SSF52540 342 531 6.91E-53 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 SUPERFAMILY SSF52156 638 768 1.31E-34 T 10-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 Gene3D G3DSA:3.40.50.10050 661 740 7.5E-26 T 10-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 PANTHER PTHR23115:SF184 339 688 8.6E-184 T 10-11-2016 CJM129_RS00690 a1af3048bf0818a3ac68b5482d7acdfb 861 Gene3D G3DSA:2.40.30.10 531 624 8.6E-18 T 10-11-2016 CJM129_RS04845 35c29b76b565f33b0eb3feb78559e513 188 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 22 173 1.9E-47 T 10-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CJM129_RS04845 35c29b76b565f33b0eb3feb78559e513 188 PIRSF PIRSF003078 6 185 1.7E-36 T 10-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CJM129_RS04845 35c29b76b565f33b0eb3feb78559e513 188 PANTHER PTHR31760:SF0 18 174 8.0E-27 T 10-11-2016 CJM129_RS04845 35c29b76b565f33b0eb3feb78559e513 188 Gene3D G3DSA:3.40.50.150 19 173 1.8E-32 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS04845 35c29b76b565f33b0eb3feb78559e513 188 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 11 187 19.679 T 10-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CJM129_RS04845 35c29b76b565f33b0eb3feb78559e513 188 SUPERFAMILY SSF53335 17 174 1.18E-25 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS04845 35c29b76b565f33b0eb3feb78559e513 188 PANTHER PTHR31760 18 174 8.0E-27 T 10-11-2016 CJM129_RS04845 35c29b76b565f33b0eb3feb78559e513 188 Pfam PF02527 rRNA small subunit methyltransferase G 19 176 3.0E-35 T 10-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CJM129_RS03055 4dd61a18fb4bc21a85628fd1b591236d 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 1.7E-132 T 10-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS03055 4dd61a18fb4bc21a85628fd1b591236d 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 3.3E-75 T 10-11-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS03055 4dd61a18fb4bc21a85628fd1b591236d 340 SUPERFAMILY SSF51735 4 184 2.42E-73 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS03055 4dd61a18fb4bc21a85628fd1b591236d 340 Gene3D G3DSA:3.50.50.60 5 43 8.6E-6 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS03055 4dd61a18fb4bc21a85628fd1b591236d 340 SUPERFAMILY SSF48179 185 334 4.42E-71 T 10-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJM129_RS03055 4dd61a18fb4bc21a85628fd1b591236d 340 PANTHER PTHR21371 4 339 1.4E-180 T 10-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS03055 4dd61a18fb4bc21a85628fd1b591236d 340 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 330 44.894 T 10-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS03055 4dd61a18fb4bc21a85628fd1b591236d 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 5.7E-64 T 10-11-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS03055 4dd61a18fb4bc21a85628fd1b591236d 340 Gene3D G3DSA:1.10.1040.10 44 327 1.3E-110 T 10-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 129 140 - T 10-11-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 PANTHER PTHR11846 1 416 2.6E-205 T 10-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 416 3.2E-160 T 10-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 Gene3D G3DSA:3.40.440.10 192 261 4.7E-68 T 10-11-2016 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 Gene3D G3DSA:3.40.440.10 3 94 4.7E-68 T 10-11-2016 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 416 174.554 T 10-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 Pfam PF00709 Adenylosuccinate synthetase 6 414 1.2E-161 T 10-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 SMART SM00788 4 415 7.4E-253 T 10-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 Gene3D G3DSA:3.90.170.10 262 416 8.1E-63 T 10-11-2016 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 10-11-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 SUPERFAMILY SSF52540 3 415 5.42E-155 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07965 017eeb320d61c30148c31e79f3d5d4fe 416 Gene3D G3DSA:1.10.300.10 98 191 2.5E-24 T 10-11-2016 CJM129_RS05905 031c8501cf0f11439d8830ba42453ad8 358 SUPERFAMILY SSF53756 3 355 3.84E-61 T 10-11-2016 CJM129_RS05905 031c8501cf0f11439d8830ba42453ad8 358 Pfam PF00534 Glycosyl transferases group 1 170 335 7.9E-38 T 10-11-2016 IPR001296 Glycosyl transferase, family 1 CJM129_RS05905 031c8501cf0f11439d8830ba42453ad8 358 PANTHER PTHR12526 1 357 1.4E-37 T 10-11-2016 CJM129_RS05905 031c8501cf0f11439d8830ba42453ad8 358 Pfam PF13439 Glycosyltransferase Family 4 13 143 1.7E-11 T 10-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CJM129_RS05905 031c8501cf0f11439d8830ba42453ad8 358 Gene3D G3DSA:3.40.50.2000 179 335 2.0E-18 T 10-11-2016 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PRINTS PR00407 Eukaryotic molybdopterin domain signature 294 306 1.7E-13 T 10-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PRINTS PR00407 Eukaryotic molybdopterin domain signature 231 244 1.7E-13 T 10-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PRINTS PR00407 Eukaryotic molybdopterin domain signature 378 390 1.7E-13 T 10-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PRINTS PR00407 Eukaryotic molybdopterin domain signature 76 92 1.7E-13 T 10-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PRINTS PR00407 Eukaryotic molybdopterin domain signature 145 157 1.7E-13 T 10-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PRINTS PR00407 Eukaryotic molybdopterin domain signature 160 175 1.7E-13 T 10-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PRINTS PR00407 Eukaryotic molybdopterin domain signature 247 260 1.7E-13 T 10-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PRINTS PR00407 Eukaryotic molybdopterin domain signature 392 405 1.7E-13 T 10-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PRINTS PR00407 Eukaryotic molybdopterin domain signature 333 345 1.7E-13 T 10-11-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 SUPERFAMILY SSF81296 297 410 2.8E-29 T 10-11-2016 IPR014756 Immunoglobulin E-set CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 292 409 2.2E-16 T 10-11-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 Gene3D G3DSA:2.60.40.650 297 409 4.1E-30 T 10-11-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 Pfam PF00174 Oxidoreductase molybdopterin binding domain 102 265 1.2E-41 T 10-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 PANTHER PTHR19372 46 410 2.1E-78 T 10-11-2016 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 Gene3D G3DSA:3.90.420.10 49 293 6.5E-60 T 10-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CJM129_RS00025 e6d3db5eb6e72a33480799dd8c7ea75b 412 SUPERFAMILY SSF56524 46 293 3.92E-57 T 10-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 Hamap MF_01201 Alanine racemase. 1 328 21.675 T 10-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 PANTHER PTHR30511 1 328 4.4E-58 T 10-11-2016 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 SUPERFAMILY SSF50621 206 328 4.53E-29 T 10-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 Gene3D G3DSA:2.40.37.10 204 328 2.0E-24 T 10-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 Pfam PF01168 Alanine racemase, N-terminal domain 6 208 3.1E-36 T 10-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 PRINTS PR00992 Alanine racemase signature 249 264 5.3E-24 T 10-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 PRINTS PR00992 Alanine racemase signature 232 247 5.3E-24 T 10-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 PRINTS PR00992 Alanine racemase signature 109 121 5.3E-24 T 10-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 PRINTS PR00992 Alanine racemase signature 25 41 5.3E-24 T 10-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 PRINTS PR00992 Alanine racemase signature 142 153 5.3E-24 T 10-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 PANTHER PTHR30511:SF0 1 328 4.4E-58 T 10-11-2016 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 Gene3D G3DSA:3.20.20.10 9 203 6.9E-40 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 Pfam PF00842 Alanine racemase, C-terminal domain 216 326 1.4E-19 T 10-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 SUPERFAMILY SSF51419 6 212 1.8E-39 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 SMART SM01005 216 328 2.5E-27 T 10-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 TIGRFAM TIGR00492 alr: alanine racemase 3 328 5.5E-52 T 10-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS04365 9829df99600766ce8b8218647f47d27e 328 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 10-11-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS07620 d121a56ae1bff0891787b775c8ed8a2d 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 234 1.2E-26 T 10-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CJM129_RS07620 d121a56ae1bff0891787b775c8ed8a2d 312 PANTHER PTHR10366 4 312 1.2E-87 T 10-11-2016 CJM129_RS07620 d121a56ae1bff0891787b775c8ed8a2d 312 Gene3D G3DSA:3.40.50.720 2 213 2.0E-35 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07620 d121a56ae1bff0891787b775c8ed8a2d 312 PANTHER PTHR10366:SF370 4 312 1.2E-87 T 10-11-2016 CJM129_RS07620 d121a56ae1bff0891787b775c8ed8a2d 312 Gene3D G3DSA:3.90.25.10 214 302 8.2E-6 T 10-11-2016 CJM129_RS07620 d121a56ae1bff0891787b775c8ed8a2d 312 SUPERFAMILY SSF51735 3 302 3.12E-54 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 10-11-2016 IPR018181 Heat shock protein 70, conserved site CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Gene3D G3DSA:1.20.1270.10 526 599 8.4E-26 T 10-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Gene3D G3DSA:3.90.640.10 224 307 2.3E-29 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 10-11-2016 IPR018181 Heat shock protein 70, conserved site CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 620 35.592 T 10-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 SUPERFAMILY SSF100934 501 600 3.73E-14 T 10-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Gene3D G3DSA:2.60.34.10 384 525 6.0E-71 T 10-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Gene3D G3DSA:3.30.420.40 4 52 6.7E-64 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Gene3D G3DSA:3.30.420.40 118 190 6.7E-64 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 SUPERFAMILY SSF53067 185 375 1.49E-62 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PRINTS PR00301 70kDa heat shock protein signature 137 157 2.8E-77 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.8E-77 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PRINTS PR00301 70kDa heat shock protein signature 196 206 2.8E-77 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.8E-77 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PRINTS PR00301 70kDa heat shock protein signature 382 401 2.8E-77 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PRINTS PR00301 70kDa heat shock protein signature 463 479 2.8E-77 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PRINTS PR00301 70kDa heat shock protein signature 328 344 2.8E-77 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PRINTS PR00301 70kDa heat shock protein signature 359 379 2.8E-77 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.8E-77 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Gene3D G3DSA:3.30.420.40 191 223 2.0E-31 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Gene3D G3DSA:3.30.420.40 313 354 2.0E-31 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Gene3D G3DSA:3.30.30.30 53 105 6.9E-19 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 SUPERFAMILY SSF53067 1 182 6.74E-61 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 1.5E-287 T 10-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 Pfam PF00012 Hsp70 protein 4 600 6.9E-246 T 10-11-2016 IPR013126 Heat shock protein 70 family CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 SUPERFAMILY SSF100920 378 534 1.22E-62 T 10-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PANTHER PTHR19375:SF173 2 623 0.0 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 PANTHER PTHR19375 2 623 0.0 T 10-11-2016 CJM129_RS03655 2b3b5f9009045d1e7d838030664b7aaa 623 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 10-11-2016 IPR018181 Heat shock protein 70, conserved site CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 PANTHER PTHR11451 3 317 8.1E-95 T 10-11-2016 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 SUPERFAMILY SSF48163 302 458 1.07E-34 T 10-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 SUPERFAMILY SSF52374 5 299 1.58E-106 T 10-11-2016 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 Gene3D G3DSA:3.90.800.10 70 183 7.0E-36 T 10-11-2016 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 PANTHER PTHR11451:SF41 3 317 8.1E-95 T 10-11-2016 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 308 5.8E-106 T 10-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 1.1E-25 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 1.1E-25 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 1.1E-25 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 1.1E-25 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 1.1E-25 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 Gene3D G3DSA:1.10.10.350 364 458 4.8E-25 T 10-11-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 Gene3D G3DSA:1.10.1160.10 236 317 3.5E-33 T 10-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 459 5.7E-172 T 10-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 Gene3D G3DSA:3.40.50.620 184 233 1.0E-49 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 Gene3D G3DSA:3.40.50.620 5 69 1.0E-49 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 458 31.741 T 10-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJM129_RS06950 72ac3e795732c34ebd110ff24a7566dc 463 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 10-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 1.5E-9 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 214 249 2.1E-5 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 5 320 1.0E-128 T 10-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 2 317 31.911 T 10-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 Gene3D G3DSA:2.160.10.10 104 298 7.4E-44 T 10-11-2016 CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 PANTHER PTHR22572 103 287 3.8E-50 T 10-11-2016 CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 18 86 1.2E-12 T 10-11-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 121 149 - T 10-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 SUPERFAMILY SSF51161 30 306 7.86E-70 T 10-11-2016 IPR011004 Trimeric LpxA-like CJM129_RS02785 5de50240b90fddc53a162288e6bd8b9c 321 PANTHER PTHR22572:SF117 103 287 3.8E-50 T 10-11-2016 CJM129_RS00695 ed1a163f39403f3fb9d615d4f595eb00 120 Gene3D G3DSA:3.30.300.20 6 118 1.2E-16 T 10-11-2016 IPR015946 K homology domain-like, alpha/beta CJM129_RS00695 ed1a163f39403f3fb9d615d4f595eb00 120 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 115 9.4E-18 T 10-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 CJM129_RS00695 ed1a163f39403f3fb9d615d4f595eb00 120 Pfam PF02033 Ribosome-binding factor A 8 110 3.0E-13 T 10-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 CJM129_RS00695 ed1a163f39403f3fb9d615d4f595eb00 120 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 117 14.276 T 10-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 CJM129_RS00695 ed1a163f39403f3fb9d615d4f595eb00 120 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 0.006 T 10-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 CJM129_RS00695 ed1a163f39403f3fb9d615d4f595eb00 120 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 10-11-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CJM129_RS00695 ed1a163f39403f3fb9d615d4f595eb00 120 SUPERFAMILY SSF89919 7 101 2.49E-15 T 10-11-2016 IPR023799 Ribosome-binding factor A domain CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 Pfam PF14572 Phosphoribosyl synthetase-associated domain 197 308 4.4E-26 T 10-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 308 3.0E-129 T 10-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 10-11-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 Gene3D G3DSA:3.40.50.2020 1 159 1.0E-72 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 PANTHER PTHR10210 1 308 1.3E-178 T 10-11-2016 CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 3.8E-50 T 10-11-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 SUPERFAMILY SSF53271 69 301 4.18E-65 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 SMART SM01400 4 120 3.3E-80 T 10-11-2016 CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 Gene3D G3DSA:3.40.50.2020 160 282 1.4E-51 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS04425 5045b4ae08f74162139de1db7a2f449e 309 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 309 48.521 T 10-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 CJM129_RS05145 d41577eb11d60ce5746a01c1b1b5255d 250 Pfam PF12796 Ankyrin repeats (3 copies) 78 172 4.4E-8 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS05145 d41577eb11d60ce5746a01c1b1b5255d 250 Gene3D G3DSA:1.25.40.20 76 192 1.5E-14 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS05145 d41577eb11d60ce5746a01c1b1b5255d 250 PANTHER PTHR24188 75 193 7.2E-14 T 10-11-2016 CJM129_RS05145 d41577eb11d60ce5746a01c1b1b5255d 250 SUPERFAMILY SSF48403 73 190 5.47E-15 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS05145 d41577eb11d60ce5746a01c1b1b5255d 250 SMART SM00248 66 98 1900.0 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS05145 d41577eb11d60ce5746a01c1b1b5255d 250 SMART SM00248 104 133 0.056 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS05145 d41577eb11d60ce5746a01c1b1b5255d 250 SMART SM00248 143 173 29.0 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS05790 085dcf3286073fa98b560abe8258f760 150 Pfam PF01668 SmpB protein 3 64 1.4E-25 T 10-11-2016 IPR000037 SsrA-binding protein GO:0003723 CJM129_RS05790 085dcf3286073fa98b560abe8258f760 150 SUPERFAMILY SSF74982 1 129 4.05E-44 T 10-11-2016 IPR023620 Small protein B CJM129_RS05790 085dcf3286073fa98b560abe8258f760 150 Hamap MF_00023 SsrA-binding protein [smpB]. 1 150 62.592 T 10-11-2016 IPR000037 SsrA-binding protein GO:0003723 CJM129_RS05790 085dcf3286073fa98b560abe8258f760 150 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 4 129 8.0E-67 T 10-11-2016 IPR000037 SsrA-binding protein GO:0003723 CJM129_RS05790 085dcf3286073fa98b560abe8258f760 150 PANTHER PTHR30308 1 149 7.0E-64 T 10-11-2016 CJM129_RS05790 085dcf3286073fa98b560abe8258f760 150 PANTHER PTHR30308:SF2 1 149 7.0E-64 T 10-11-2016 CJM129_RS05790 085dcf3286073fa98b560abe8258f760 150 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 147 8.6E-52 T 10-11-2016 IPR000037 SsrA-binding protein GO:0003723 CJM129_RS05790 085dcf3286073fa98b560abe8258f760 150 Gene3D G3DSA:2.40.280.10 2 124 1.2E-44 T 10-11-2016 IPR023620 Small protein B CJM129_RS06605 a9635804c98e4189edf86632560339de 401 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 10-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 SUPERFAMILY SSF52374 6 315 6.53E-86 T 10-11-2016 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 2.5E-21 T 10-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 2.5E-21 T 10-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 2.5E-21 T 10-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 2.5E-21 T 10-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 399 44.344 T 10-11-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 PANTHER PTHR11766 1 401 1.1E-188 T 10-11-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 Pfam PF00579 tRNA synthetases class I (W and Y) 35 320 9.8E-75 T 10-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 PANTHER PTHR11766:SF1 1 401 1.1E-188 T 10-11-2016 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 Gene3D G3DSA:1.10.240.10 232 331 6.3E-35 T 10-11-2016 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 Gene3D G3DSA:3.40.50.620 11 231 4.6E-75 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS06605 a9635804c98e4189edf86632560339de 401 Gene3D G3DSA:3.10.290.10 332 398 1.4E-21 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 399 2.2E-116 T 10-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 SUPERFAMILY SSF55174 303 399 3.79E-16 T 10-11-2016 CJM129_RS06605 a9635804c98e4189edf86632560339de 401 SMART SM00363 339 400 0.0026 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS05105 bc856035890aa078be168761e748d556 130 Pfam PF04965 Gene 25-like lysozyme 26 107 1.1E-9 T 10-11-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD CJM129_RS05105 bc856035890aa078be168761e748d556 130 Gene3D G3DSA:3.10.450.40 24 110 1.6E-5 T 10-11-2016 CJM129_RS05105 bc856035890aa078be168761e748d556 130 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 2 117 3.4E-15 T 10-11-2016 IPR017737 Type VI secretion system, lysozyme-related protein CJM129_RS05105 bc856035890aa078be168761e748d556 130 SUPERFAMILY SSF160719 22 112 1.96E-11 T 10-11-2016 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 270 3.0E-75 T 10-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 PANTHER PTHR21091 1 212 2.7E-49 T 10-11-2016 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 PANTHER PTHR21091:SF18 1 212 2.7E-49 T 10-11-2016 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 Gene3D G3DSA:3.30.950.10 116 227 1.5E-28 T 10-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 SUPERFAMILY SSF53790 1 223 1.57E-62 T 10-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 225 32.437 T 10-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 Gene3D G3DSA:3.40.1010.10 1 115 9.1E-17 T 10-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 PIRSF PIRSF005917 1 274 1.8E-79 T 10-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 10-11-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS00780 2d8e416ede8c73470d2908bc7e7ebdff 274 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 206 3.3E-26 T 10-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 SUPERFAMILY SSF109604 307 469 2.06E-28 T 10-11-2016 CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 SMART SM00471 329 435 3.2E-12 T 10-11-2016 IPR003607 HD/PDEase domain CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 PANTHER PTHR12826 209 516 3.4E-102 T 10-11-2016 CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 Gene3D G3DSA:3.30.1370.10 216 272 9.3E-7 T 10-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 Gene3D G3DSA:1.10.3210.10 313 492 4.8E-38 T 10-11-2016 IPR006674 HD domain CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 Pfam PF12072 Domain of unknown function (DUF3552) 5 201 1.5E-24 T 10-11-2016 IPR022711 Ribonuclease Y, N-terminal CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 TIGRFAM TIGR00277 HDIG: HDIG domain 329 406 2.2E-22 T 10-11-2016 IPR006675 HDIG domain CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 5 517 9.7E-202 T 10-11-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 Pfam PF01966 HD domain 335 425 2.3E-17 T 10-11-2016 IPR006674 HD domain CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 Hamap MF_00335 Ribonuclease Y [rny]. 2 517 23.013 T 10-11-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 CJM129_RS06295 d2ea4aa62482fd2335ec83f003c72e92 517 SUPERFAMILY SSF54791 207 301 2.48E-12 T 10-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 248 612 8.5E-99 T 10-11-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 PANTHER PTHR13847:SF182 553 612 2.7E-30 T 10-11-2016 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 Pfam PF01266 FAD dependent oxidoreductase 248 582 1.2E-25 T 10-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 PANTHER PTHR13847:SF182 207 534 2.7E-30 T 10-11-2016 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 2 607 19.778 T 10-11-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 PANTHER PTHR13847 553 612 2.7E-30 T 10-11-2016 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 Gene3D G3DSA:3.50.50.60 520 607 4.5E-18 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 Gene3D G3DSA:3.50.50.60 355 422 4.5E-18 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 Gene3D G3DSA:3.50.50.60 245 318 4.5E-18 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 Gene3D G3DSA:3.30.9.10 423 517 1.7E-7 T 10-11-2016 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 SUPERFAMILY SSF51905 245 454 1.42E-15 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 PANTHER PTHR13847 207 534 2.7E-30 T 10-11-2016 CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 Gene3D G3DSA:3.40.50.150 10 229 6.0E-62 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06590 e9eb4b10e2d4ce6cb2152fbe2627ee60 613 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 106 224 3.2E-38 T 10-11-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 CJM129_RS07525 3ba5de823c97131110ea6b7595730961 178 PANTHER PTHR35091 1 178 1.1E-34 T 10-11-2016 CJM129_RS07525 3ba5de823c97131110ea6b7595730961 178 Pfam PF03748 Flagellar basal body-associated protein FliL 83 177 1.6E-23 T 10-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CJM129_RS07525 3ba5de823c97131110ea6b7595730961 178 PANTHER PTHR35091:SF2 1 178 1.1E-34 T 10-11-2016 CJM129_RS07525 3ba5de823c97131110ea6b7595730961 178 Gene3D G3DSA:1.10.287.70 19 58 5.3E-4 T 10-11-2016 CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 567 32.074 T 10-11-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 SUPERFAMILY SSF52833 461 566 7.08E-23 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 PANTHER PTHR32234:SF0 16 566 6.1E-110 T 10-11-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 Pfam PF00085 Thioredoxin 466 566 5.1E-13 T 10-11-2016 IPR013766 Thioredoxin domain GO:0045454 CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 SUPERFAMILY SSF74863 16 127 2.35E-25 T 10-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 PANTHER PTHR32234 16 566 6.1E-110 T 10-11-2016 CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 175 376 9.0E-17 T 10-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 Gene3D G3DSA:2.60.40.1250 14 127 5.8E-20 T 10-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 Pfam PF11412 Disulphide bond corrector protein DsbC 17 127 1.1E-16 T 10-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CJM129_RS02920 b8b953e09c5e3a8796fd6b1220a2586c 567 Gene3D G3DSA:3.40.30.10 461 565 2.7E-27 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS05640 8075a3e3c9f18f4e5e4e52c134940c5f 129 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 1 122 20.514 T 10-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 CJM129_RS05640 8075a3e3c9f18f4e5e4e52c134940c5f 129 SUPERFAMILY SSF141457 3 126 2.22E-36 T 10-11-2016 IPR024046 Flagellar assembly factor FliW domain CJM129_RS05640 8075a3e3c9f18f4e5e4e52c134940c5f 129 Pfam PF02623 FliW protein 5 115 2.1E-32 T 10-11-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 CJM129_RS05640 8075a3e3c9f18f4e5e4e52c134940c5f 129 Gene3D G3DSA:2.30.290.10 3 115 1.0E-36 T 10-11-2016 IPR024046 Flagellar assembly factor FliW domain CJM129_RS04255 e90fe9f6c802aced2404c641785ae24f 90 Gene3D G3DSA:1.10.287.10 3 89 8.6E-37 T 10-11-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CJM129_RS04255 e90fe9f6c802aced2404c641785ae24f 90 Pfam PF00312 Ribosomal protein S15 8 88 1.2E-34 T 10-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS04255 e90fe9f6c802aced2404c641785ae24f 90 SUPERFAMILY SSF47060 3 89 3.83E-33 T 10-11-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 CJM129_RS04255 e90fe9f6c802aced2404c641785ae24f 90 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 8.0E-39 T 10-11-2016 CJM129_RS04255 e90fe9f6c802aced2404c641785ae24f 90 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 10-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS04255 e90fe9f6c802aced2404c641785ae24f 90 SMART SM01387 8 88 3.8E-48 T 10-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS04255 e90fe9f6c802aced2404c641785ae24f 90 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.122 T 10-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CJM129_RS04255 e90fe9f6c802aced2404c641785ae24f 90 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 88 4.4E-36 T 10-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 CJM129_RS04255 e90fe9f6c802aced2404c641785ae24f 90 PANTHER PTHR23321 1 89 6.7E-39 T 10-11-2016 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Gene3D G3DSA:2.40.50.140 306 377 1.1E-29 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Gene3D G3DSA:1.10.150.20 420 486 1.7E-21 T 10-11-2016 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 318 333 - T 10-11-2016 IPR033136 NAD-dependent DNA ligase, conserved site CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 SMART SM00532 1 432 3.2E-244 T 10-11-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 16 640 4.4E-211 T 10-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Gene3D G3DSA:3.30.470.30 112 238 1.2E-46 T 10-11-2016 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 SUPERFAMILY SSF52113 573 646 5.67E-19 T 10-11-2016 IPR001357 BRCT domain CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 SUPERFAMILY SSF47781 391 550 1.33E-40 T 10-11-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Pfam PF12826 Helix-hairpin-helix motif 494 551 1.8E-6 T 10-11-2016 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 304 5.2E-100 T 10-11-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Hamap MF_01588 DNA ligase [ligA]. 1 645 44.155 T 10-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 107 136 - T 10-11-2016 IPR018239 NAD-dependent DNA ligase, active site CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Gene3D G3DSA:1.10.287.610 3 59 1.6E-13 T 10-11-2016 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Gene3D G3DSA:1.10.150.20 488 552 1.2E-10 T 10-11-2016 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 SUPERFAMILY SSF56091 3 304 9.36E-99 T 10-11-2016 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 SUPERFAMILY SSF50249 306 384 3.43E-25 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 PANTHER PTHR23389 3 509 4.2E-140 T 10-11-2016 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 PIRSF PIRSF001604 1 647 3.1E-216 T 10-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 577 641 2.5E-12 T 10-11-2016 IPR001357 BRCT domain CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 PANTHER PTHR23389:SF9 3 509 4.2E-140 T 10-11-2016 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 SMART SM00292 572 647 1.4E-10 T 10-11-2016 IPR001357 BRCT domain CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 308 384 1.4E-30 T 10-11-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CJM129_RS02835 78c284376a14582e12f1b63bc2a89b0c 647 Gene3D G3DSA:3.40.50.10190 571 646 1.4E-25 T 10-11-2016 IPR001357 BRCT domain CJM129_RS00205 63d8dbc11d6e5d9442c97a85247f3648 347 Pfam PF00034 Cytochrome c 203 287 1.6E-10 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS00205 63d8dbc11d6e5d9442c97a85247f3648 347 SUPERFAMILY SSF46626 92 175 3.14E-12 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS00205 63d8dbc11d6e5d9442c97a85247f3648 347 SUPERFAMILY SSF46626 193 288 2.72E-14 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS00205 63d8dbc11d6e5d9442c97a85247f3648 347 Gene3D G3DSA:1.10.760.10 57 174 2.0E-10 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS00205 63d8dbc11d6e5d9442c97a85247f3648 347 Gene3D G3DSA:1.10.760.10 193 286 1.4E-11 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 PIRSF PIRSF003095 1 444 5.2E-107 T 10-11-2016 IPR005215 Trigger factor GO:0015031 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 Gene3D G3DSA:3.30.70.1050 1 119 2.6E-22 T 10-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 Hamap MF_00303 Trigger factor [tig]. 1 434 19.652 T 10-11-2016 IPR005215 Trigger factor GO:0015031 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 TIGRFAM TIGR00115 tig: trigger factor 12 425 1.0E-111 T 10-11-2016 IPR005215 Trigger factor GO:0015031 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 268 426 1.1E-34 T 10-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 Gene3D G3DSA:1.10.3120.10 207 399 1.4E-43 T 10-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 1.1E-23 T 10-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 SUPERFAMILY SSF54534 103 245 1.14E-32 T 10-11-2016 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 241 1.7E-16 T 10-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 SUPERFAMILY SSF109998 252 440 1.57E-29 T 10-11-2016 IPR027304 Trigger factor/SurA domain CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 SUPERFAMILY SSF102735 1 130 7.46E-25 T 10-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CJM129_RS00975 802c66f0bc66c12ab37342fb4ded6268 444 PANTHER PTHR30560 1 444 1.7E-68 T 10-11-2016 CJM129_RS00810 7b00f622599189e1a7d5da30e446bb1a 247 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 244 39.785 T 10-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 CJM129_RS00810 7b00f622599189e1a7d5da30e446bb1a 247 PANTHER PTHR11228 1 239 1.6E-16 T 10-11-2016 CJM129_RS00810 7b00f622599189e1a7d5da30e446bb1a 247 PANTHER PTHR11228:SF33 1 239 1.6E-16 T 10-11-2016 CJM129_RS00810 7b00f622599189e1a7d5da30e446bb1a 247 Pfam PF13394 4Fe-4S single cluster domain 22 151 1.2E-28 T 10-11-2016 CJM129_RS00810 7b00f622599189e1a7d5da30e446bb1a 247 SUPERFAMILY SSF102114 61 203 7.65E-8 T 10-11-2016 CJM129_RS00810 7b00f622599189e1a7d5da30e446bb1a 247 Gene3D G3DSA:3.20.20.70 27 232 2.4E-9 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 Gene3D G3DSA:2.60.40.420 367 512 3.0E-33 T 10-11-2016 IPR008972 Cupredoxin CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 ProSitePatterns PS00080 Multicopper oxidases signature 2. 494 505 - T 10-11-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 Pfam PF07732 Multicopper oxidase 89 205 2.5E-30 T 10-11-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 Pfam PF00394 Multicopper oxidase 237 328 1.8E-8 T 10-11-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 SUPERFAMILY SSF49503 56 203 8.36E-31 T 10-11-2016 IPR008972 Cupredoxin CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 Pfam PF07731 Multicopper oxidase 396 512 3.3E-25 T 10-11-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 SUPERFAMILY SSF49503 212 322 1.33E-17 T 10-11-2016 IPR008972 Cupredoxin CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 SUPERFAMILY SSF49503 396 511 1.05E-29 T 10-11-2016 IPR008972 Cupredoxin CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 Gene3D G3DSA:2.60.40.420 205 322 4.2E-20 T 10-11-2016 IPR008972 Cupredoxin CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 PANTHER PTHR11709 66 513 2.8E-83 T 10-11-2016 CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 PANTHER PTHR11709:SF2 66 513 2.8E-83 T 10-11-2016 CJM129_RS08055 9cc67bc22ef8c7ba8c57faead722e469 513 Gene3D G3DSA:2.60.40.420 74 204 9.1E-31 T 10-11-2016 IPR008972 Cupredoxin CJM129_RS01560 834151ed04b3e777ea6ed26730f29c52 324 Gene3D G3DSA:3.40.47.10 4 160 3.3E-60 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS01560 834151ed04b3e777ea6ed26730f29c52 324 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 185 6.4E-28 T 10-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CJM129_RS01560 834151ed04b3e777ea6ed26730f29c52 324 PANTHER PTHR34069:SF2 1 323 1.5E-119 T 10-11-2016 CJM129_RS01560 834151ed04b3e777ea6ed26730f29c52 324 PANTHER PTHR34069 1 323 1.5E-119 T 10-11-2016 CJM129_RS01560 834151ed04b3e777ea6ed26730f29c52 324 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 319 69.136 T 10-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CJM129_RS01560 834151ed04b3e777ea6ed26730f29c52 324 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 319 2.8E-131 T 10-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CJM129_RS01560 834151ed04b3e777ea6ed26730f29c52 324 SUPERFAMILY SSF53901 6 319 1.18E-63 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS01560 834151ed04b3e777ea6ed26730f29c52 324 Gene3D G3DSA:3.40.47.10 161 319 7.3E-51 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS01560 834151ed04b3e777ea6ed26730f29c52 324 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 230 318 1.7E-35 T 10-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CJM129_RS08535 14810aac9468a9a0e475934288aa43f7 328 SUPERFAMILY SSF81345 6 321 2.22E-71 T 10-11-2016 IPR029022 ABC transporter, BtuC-like CJM129_RS08535 14810aac9468a9a0e475934288aa43f7 328 PANTHER PTHR30472:SF3 8 326 1.0E-102 T 10-11-2016 CJM129_RS08535 14810aac9468a9a0e475934288aa43f7 328 PANTHER PTHR30472 8 326 1.0E-102 T 10-11-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CJM129_RS08535 14810aac9468a9a0e475934288aa43f7 328 Pfam PF01032 FecCD transport family 21 322 4.9E-84 T 10-11-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CJM129_RS08535 14810aac9468a9a0e475934288aa43f7 328 Gene3D G3DSA:1.10.3470.10 7 326 7.8E-94 T 10-11-2016 IPR029022 ABC transporter, BtuC-like CJM129_RS04080 95a00669757ee21bd791ec158a7efc99 93 PANTHER PTHR33219 1 92 3.5E-16 T 10-11-2016 CJM129_RS04080 95a00669757ee21bd791ec158a7efc99 93 PANTHER PTHR33219:SF5 1 92 3.5E-16 T 10-11-2016 CJM129_RS04080 95a00669757ee21bd791ec158a7efc99 93 Pfam PF02325 YGGT family 16 84 1.9E-18 T 10-11-2016 IPR003425 CCB3/YggT GO:0016020 CJM129_RS02255 c1c4dee848e8b4e76999963f72df188a 127 Gene3D G3DSA:1.10.490.10 4 119 2.5E-20 T 10-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CJM129_RS02255 c1c4dee848e8b4e76999963f72df188a 127 Pfam PF01152 Bacterial-like globin 8 118 8.2E-5 T 10-11-2016 IPR001486 Truncated hemoglobin GO:0019825 CJM129_RS02255 c1c4dee848e8b4e76999963f72df188a 127 SUPERFAMILY SSF46458 6 119 1.15E-23 T 10-11-2016 IPR009050 Globin-like CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 SMART SM01274 13 146 2.5E-76 T 10-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 Pfam PF03949 Malic enzyme, NAD binding domain 159 346 1.3E-24 T 10-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 PANTHER PTHR23406 29 399 4.4E-159 T 10-11-2016 CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 Gene3D G3DSA:3.40.50.720 155 405 3.1E-82 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 Pfam PF00390 Malic enzyme, N-terminal domain 15 145 5.9E-26 T 10-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 SMART SM00919 157 391 5.3E-133 T 10-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 SUPERFAMILY SSF51735 157 405 1.05E-79 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 PANTHER PTHR23406:SF28 29 399 4.4E-159 T 10-11-2016 CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 SUPERFAMILY SSF53223 8 155 4.6E-48 T 10-11-2016 CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 Gene3D G3DSA:3.40.50.10380 9 154 7.3E-47 T 10-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 PIRSF PIRSF000106 34 410 2.8E-68 T 10-11-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 CJM129_RS06945 a4b52773d9de2b727ac5fe7bd12ee922 411 ProSitePatterns PS00331 Malic enzymes signature. 153 169 - T 10-11-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 SUPERFAMILY SSF52440 1 127 3.26E-27 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 2 330 1.5E-98 T 10-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 PANTHER PTHR23132 1 302 3.7E-43 T 10-11-2016 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 Gene3D G3DSA:3.30.1490.20 142 204 7.7E-18 T 10-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 Gene3D G3DSA:3.30.470.20 120 141 9.6E-24 T 10-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 Gene3D G3DSA:3.30.470.20 208 323 9.6E-24 T 10-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 Gene3D G3DSA:3.40.50.20 1 117 2.7E-19 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 95 106 - T 10-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 Pfam PF01820 D-ala D-ala ligase N-terminus 3 117 6.2E-17 T 10-11-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 275 302 - T 10-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 333 27.567 T 10-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 SUPERFAMILY SSF56059 128 309 1.4E-34 T 10-11-2016 CJM129_RS03870 428a56c9aea54608610e0e744e81ed01 346 Pfam PF07478 D-ala D-ala ligase C-terminus 137 309 3.3E-32 T 10-11-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 SUPERFAMILY SSF54211 603 788 1.14E-48 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 SMART SM00382 356 501 8.7E-12 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 SUPERFAMILY SSF52540 314 583 6.58E-45 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 SUPERFAMILY SSF88697 10 114 2.49E-19 T 10-11-2016 IPR015947 PUA-like domain CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 Gene3D G3DSA:3.30.230.10 597 789 7.4E-68 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 578 790 1.3E-78 T 10-11-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 200 1.5E-19 T 10-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 Gene3D G3DSA:1.10.8.60 509 592 4.8E-29 T 10-11-2016 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 SMART SM00464 12 201 3.7E-53 T 10-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 PANTHER PTHR10046 1 788 6.5E-293 T 10-11-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 694 702 - T 10-11-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 PANTHER PTHR10046:SF24 1 788 6.5E-293 T 10-11-2016 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 PIRSF PIRSF001174 1 791 0.0 T 10-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 360 497 8.3E-23 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 TIGRFAM TIGR00763 lon: endopeptidase La 14 789 2.1E-263 T 10-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 Gene3D G3DSA:3.40.50.300 310 508 4.6E-30 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 691 710 4.9E-47 T 10-11-2016 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 364 383 4.9E-47 T 10-11-2016 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 744 762 4.9E-47 T 10-11-2016 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 603 619 4.9E-47 T 10-11-2016 CJM129_RS05630 ae8821d824d42cd158fcdc8751a76fab 791 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 721 740 4.9E-47 T 10-11-2016 CJM129_RS08785 9e765ad62e2a4c56960ea891cf56aa86 429 Pfam PF12704 MacB-like periplasmic core domain 18 218 1.1E-8 T 10-11-2016 IPR025857 MacB-like periplasmic core domain CJM129_RS08785 9e765ad62e2a4c56960ea891cf56aa86 429 PANTHER PTHR30489:SF16 1 261 4.2E-48 T 10-11-2016 CJM129_RS08785 9e765ad62e2a4c56960ea891cf56aa86 429 PANTHER PTHR30489:SF16 277 429 4.2E-48 T 10-11-2016 CJM129_RS08785 9e765ad62e2a4c56960ea891cf56aa86 429 PANTHER PTHR30489 1 261 4.2E-48 T 10-11-2016 CJM129_RS08785 9e765ad62e2a4c56960ea891cf56aa86 429 PANTHER PTHR30489 277 429 4.2E-48 T 10-11-2016 CJM129_RS08785 9e765ad62e2a4c56960ea891cf56aa86 429 Pfam PF02687 FtsX-like permease family 311 420 3.9E-19 T 10-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 Gene3D G3DSA:3.30.930.10 147 489 4.0E-114 T 10-11-2016 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 Gene3D G3DSA:2.40.50.140 7 145 4.9E-40 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 Pfam PF01336 OB-fold nucleic acid binding domain 59 135 6.3E-12 T 10-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 PANTHER PTHR22594 4 492 4.9E-231 T 10-11-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 9 494 42.857 T 10-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 154 490 1.9E-84 T 10-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 PANTHER PTHR22594:SF4 4 492 4.9E-231 T 10-11-2016 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 375 391 4.9E-37 T 10-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 234 247 4.9E-37 T 10-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 205 221 4.9E-37 T 10-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 189 199 4.9E-37 T 10-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 252 269 4.9E-37 T 10-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 SUPERFAMILY SSF55681 152 491 5.57E-122 T 10-11-2016 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 7 493 1.7E-195 T 10-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 CJM129_RS01920 4d5b4e9ab32b042d9643c4675d7afc35 501 SUPERFAMILY SSF50249 6 145 8.08E-33 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS07690 085f1ae368a112c88b89fc6617003f38 804 Gene3D G3DSA:3.40.50.2000 695 767 8.2E-4 T 10-11-2016 CJM129_RS07690 085f1ae368a112c88b89fc6617003f38 804 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 482 800 2.5E-42 T 10-11-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 CJM129_RS07690 085f1ae368a112c88b89fc6617003f38 804 Gene3D G3DSA:3.90.550.10 42 234 2.4E-35 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07690 085f1ae368a112c88b89fc6617003f38 804 SUPERFAMILY SSF53448 39 292 1.37E-34 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07690 085f1ae368a112c88b89fc6617003f38 804 Pfam PF00535 Glycosyl transferase family 2 42 189 6.3E-24 T 10-11-2016 IPR001173 Glycosyltransferase 2-like CJM129_RS07690 085f1ae368a112c88b89fc6617003f38 804 PANTHER PTHR22916 42 316 1.4E-24 T 10-11-2016 CJM129_RS07690 085f1ae368a112c88b89fc6617003f38 804 SUPERFAMILY SSF53756 594 768 1.05E-9 T 10-11-2016 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 PRINTS PR00423 Cell division protein FtsZ signature 192 214 1.1E-41 T 10-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 PRINTS PR00423 Cell division protein FtsZ signature 215 236 1.1E-41 T 10-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 PRINTS PR00423 Cell division protein FtsZ signature 129 150 1.1E-41 T 10-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 PRINTS PR00423 Cell division protein FtsZ signature 101 121 1.1E-41 T 10-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 SMART SM00864 16 208 2.7E-95 T 10-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 SUPERFAMILY SSF52490 15 211 1.44E-60 T 10-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 Pfam PF12327 FtsZ family, C-terminal domain 225 320 1.2E-27 T 10-11-2016 IPR024757 Cell division protein FtsZ, C-terminal CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 SMART SM00865 210 328 5.7E-49 T 10-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 176 3.1E-37 T 10-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 Gene3D G3DSA:3.40.50.1440 15 217 4.8E-81 T 10-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 10-11-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 335 9.1E-120 T 10-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 PANTHER PTHR30314 7 340 6.7E-149 T 10-11-2016 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 356 35.0 T 10-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 PANTHER PTHR30314:SF3 7 340 6.7E-149 T 10-11-2016 CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 Gene3D G3DSA:3.30.1330.20 218 323 2.4E-43 T 10-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CJM129_RS03360 c8c4ba5d6222fcc88d0e0c1d3db20491 370 SUPERFAMILY SSF55307 210 325 1.76E-40 T 10-11-2016 IPR008280 Tubulin/FtsZ, C-terminal CJM129_RS00700 3bfd59b84c861ebc6da36f34e447cd1f 140 Pfam PF02576 Putative ribosome maturation factor RimP 3 135 2.9E-42 T 10-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CJM129_RS00700 3bfd59b84c861ebc6da36f34e447cd1f 140 PANTHER PTHR33867 3 140 6.9E-31 T 10-11-2016 CJM129_RS00700 3bfd59b84c861ebc6da36f34e447cd1f 140 PANTHER PTHR33867:SF1 3 140 6.9E-31 T 10-11-2016 CJM129_RS00700 3bfd59b84c861ebc6da36f34e447cd1f 140 SUPERFAMILY SSF74942 75 140 8.11E-11 T 10-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CJM129_RS00700 3bfd59b84c861ebc6da36f34e447cd1f 140 SUPERFAMILY SSF75420 7 74 5.36E-18 T 10-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CJM129_RS00700 3bfd59b84c861ebc6da36f34e447cd1f 140 Gene3D G3DSA:2.30.30.180 79 136 1.4E-7 T 10-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal CJM129_RS00700 3bfd59b84c861ebc6da36f34e447cd1f 140 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 140 20.859 T 10-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 CJM129_RS00700 3bfd59b84c861ebc6da36f34e447cd1f 140 Gene3D G3DSA:3.30.300.70 3 71 7.0E-22 T 10-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal CJM129_RS03770 60a61ebd796d1fa558db8d62f0c4509b 228 Gene3D G3DSA:3.40.190.10 92 222 5.6E-24 T 10-11-2016 CJM129_RS03770 60a61ebd796d1fa558db8d62f0c4509b 228 Pfam PF13531 Bacterial extracellular solute-binding protein 2 222 1.5E-26 T 10-11-2016 CJM129_RS03770 60a61ebd796d1fa558db8d62f0c4509b 228 Gene3D G3DSA:3.40.190.10 3 91 3.5E-7 T 10-11-2016 CJM129_RS03770 60a61ebd796d1fa558db8d62f0c4509b 228 SUPERFAMILY SSF53850 1 224 4.6E-36 T 10-11-2016 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 SUPERFAMILY SSF53732 2 465 1.03E-159 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 Gene3D G3DSA:3.30.499.10 293 303 6.1E-61 T 10-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 Gene3D G3DSA:3.30.499.10 335 466 6.1E-61 T 10-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 4.0E-222 T 10-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 56.907 T 10-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 10-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PANTHER PTHR11670:SF38 1 307 1.9E-240 T 10-11-2016 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PANTHER PTHR11670:SF38 327 465 1.9E-240 T 10-11-2016 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 Gene3D G3DSA:3.30.499.10 2 158 4.4E-26 T 10-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 10-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PRINTS PR00415 Aconitase family signature 286 300 3.4E-44 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PRINTS PR00415 Aconitase family signature 82 95 3.4E-44 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PRINTS PR00415 Aconitase family signature 209 222 3.4E-44 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PRINTS PR00415 Aconitase family signature 133 148 3.4E-44 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PRINTS PR00415 Aconitase family signature 399 412 3.4E-44 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PRINTS PR00415 Aconitase family signature 343 354 3.4E-44 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PRINTS PR00415 Aconitase family signature 108 116 3.4E-44 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PRINTS PR00415 Aconitase family signature 119 132 3.4E-44 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PRINTS PR00415 Aconitase family signature 195 208 3.4E-44 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 1.3E-146 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 Gene3D G3DSA:3.40.1060.10 166 281 1.1E-37 T 10-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PANTHER PTHR11670 1 307 1.9E-240 T 10-11-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09165 6fe15cf555100aec3a7b77009b1aeef5 468 PANTHER PTHR11670 327 465 1.9E-240 T 10-11-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS00660 620d7b88810eee9f3de9be68f4dc0d27 275 SUPERFAMILY SSF48179 167 275 2.49E-33 T 10-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJM129_RS00660 620d7b88810eee9f3de9be68f4dc0d27 275 PANTHER PTHR21363:SF0 1 275 8.2E-57 T 10-11-2016 CJM129_RS00660 620d7b88810eee9f3de9be68f4dc0d27 275 Gene3D G3DSA:3.40.50.720 1 173 2.6E-31 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00660 620d7b88810eee9f3de9be68f4dc0d27 275 SUPERFAMILY SSF51735 1 164 5.78E-33 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00660 620d7b88810eee9f3de9be68f4dc0d27 275 Pfam PF02153 Prephenate dehydrogenase 16 267 2.6E-69 T 10-11-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CJM129_RS00660 620d7b88810eee9f3de9be68f4dc0d27 275 PANTHER PTHR21363 1 275 8.2E-57 T 10-11-2016 CJM129_RS07085 27aeca74b3359e7acf216c55a00a8e64 646 Pfam PF01973 Protein of unknown function DUF115 217 391 9.3E-46 T 10-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CJM129_RS01210 e6aaaf200e569acfda2573cb01dd19c0 436 SUPERFAMILY SSF103473 8 427 1.44E-57 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS01210 e6aaaf200e569acfda2573cb01dd19c0 436 Gene3D G3DSA:1.20.1250.20 239 424 3.3E-11 T 10-11-2016 CJM129_RS01210 e6aaaf200e569acfda2573cb01dd19c0 436 Gene3D G3DSA:1.20.1250.20 12 221 2.9E-24 T 10-11-2016 CJM129_RS01210 e6aaaf200e569acfda2573cb01dd19c0 436 Pfam PF07690 Major Facilitator Superfamily 28 321 2.8E-26 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS01210 e6aaaf200e569acfda2573cb01dd19c0 436 PANTHER PTHR23508:SF5 5 419 5.6E-135 T 10-11-2016 CJM129_RS01210 e6aaaf200e569acfda2573cb01dd19c0 436 PANTHER PTHR23508 5 419 5.6E-135 T 10-11-2016 CJM129_RS03540 5b1a6e18affe45e7446596bec7eb5568 329 PANTHER PTHR24220:SF150 5 247 6.7E-123 T 10-11-2016 CJM129_RS03540 5b1a6e18affe45e7446596bec7eb5568 329 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS03540 5b1a6e18affe45e7446596bec7eb5568 329 SMART SM00382 28 211 6.8E-17 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS03540 5b1a6e18affe45e7446596bec7eb5568 329 Pfam PF08402 TOBE domain 258 321 5.9E-7 T 10-11-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CJM129_RS03540 5b1a6e18affe45e7446596bec7eb5568 329 PANTHER PTHR24220 5 247 6.7E-123 T 10-11-2016 CJM129_RS03540 5b1a6e18affe45e7446596bec7eb5568 329 SUPERFAMILY SSF50331 251 322 2.21E-8 T 10-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal CJM129_RS03540 5b1a6e18affe45e7446596bec7eb5568 329 Pfam PF00005 ABC transporter 20 161 1.5E-36 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS03540 5b1a6e18affe45e7446596bec7eb5568 329 SUPERFAMILY SSF52540 4 240 3.46E-84 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03540 5b1a6e18affe45e7446596bec7eb5568 329 Gene3D G3DSA:3.40.50.300 4 233 1.1E-81 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 Gene3D G3DSA:3.30.470.30 31 151 1.1E-4 T 10-11-2016 CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 PANTHER PTHR10459 39 280 3.8E-48 T 10-11-2016 CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 SUPERFAMILY SSF56091 24 199 2.4E-34 T 10-11-2016 CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 Pfam PF14743 DNA ligase OB-like domain 213 278 3.3E-29 T 10-11-2016 IPR029319 DNA ligase, OB-like domain CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 176 199 - T 10-11-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 Gene3D G3DSA:3.30.1490.70 152 182 1.1E-8 T 10-11-2016 CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 SUPERFAMILY SSF50249 173 278 5.71E-31 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 Gene3D G3DSA:2.40.50.140 183 281 3.8E-36 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 Pfam PF01068 ATP dependent DNA ligase domain 59 199 1.1E-11 T 10-11-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 CJM129_RS08925 6cbc15b490f1cd598f2d8dc888db222d 282 PANTHER PTHR10459:SF68 39 280 3.8E-48 T 10-11-2016 CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 PANTHER PTHR38418 4 310 5.8E-40 T 10-11-2016 CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 SUPERFAMILY SSF53697 2 280 2.45E-64 T 10-11-2016 CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 SUPERFAMILY SSF54631 259 312 3.32E-6 T 10-11-2016 CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 SMART SM00116 270 315 18.0 T 10-11-2016 IPR000644 CBS domain CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 SMART SM00116 205 252 2.2E-5 T 10-11-2016 IPR000644 CBS domain CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 Gene3D G3DSA:3.40.50.10490 5 187 2.1E-53 T 10-11-2016 CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 41 307 6.9E-106 T 10-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 Pfam PF01380 SIS domain 37 167 4.7E-30 T 10-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 PIRSF PIRSF004692 1 315 7.9E-133 T 10-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 Gene3D G3DSA:3.10.580.10 188 309 1.5E-31 T 10-11-2016 CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 Pfam PF00571 CBS domain 197 252 3.0E-8 T 10-11-2016 IPR000644 CBS domain CJM129_RS07700 1d08c4c6665d772f0e32b6cc220c14ba 315 Pfam PF00571 CBS domain 263 307 5.9E-6 T 10-11-2016 IPR000644 CBS domain CJM129_RS01540 3997006de4e888e6a57a2de1cd2b159e 235 Pfam PF01209 ubiE/COQ5 methyltransferase family 3 234 9.0E-49 T 10-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CJM129_RS01540 3997006de4e888e6a57a2de1cd2b159e 235 PANTHER PTHR10108:SF24 2 226 3.2E-45 T 10-11-2016 CJM129_RS01540 3997006de4e888e6a57a2de1cd2b159e 235 SUPERFAMILY SSF53335 9 225 3.73E-36 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01540 3997006de4e888e6a57a2de1cd2b159e 235 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 18 33 - T 10-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CJM129_RS01540 3997006de4e888e6a57a2de1cd2b159e 235 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 7 234 1.4E-80 T 10-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CJM129_RS01540 3997006de4e888e6a57a2de1cd2b159e 235 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 141 155 - T 10-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CJM129_RS01540 3997006de4e888e6a57a2de1cd2b159e 235 PANTHER PTHR10108 2 226 3.2E-45 T 10-11-2016 CJM129_RS01540 3997006de4e888e6a57a2de1cd2b159e 235 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 234 32.108 T 10-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 CJM129_RS01540 3997006de4e888e6a57a2de1cd2b159e 235 Gene3D G3DSA:3.40.50.150 6 227 5.5E-39 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 SUPERFAMILY SSF52540 3 305 1.83E-76 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 367 42.258 T 10-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 PIRSF PIRSF006641 1 367 7.3E-160 T 10-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 367 1.2E-148 T 10-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 PANTHER PTHR23305 1 367 5.7E-187 T 10-11-2016 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 5.7E-39 T 10-11-2016 IPR013029 Domain of unknown function DUF933 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 Pfam PF01926 50S ribosome-binding GTPase 5 117 4.7E-23 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 Gene3D G3DSA:1.10.150.300 132 203 4.7E-22 T 10-11-2016 IPR023192 TGS-like domain CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 1.2E-34 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 1.2E-34 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 1.2E-34 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-34 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 Gene3D G3DSA:3.10.20.30 271 367 5.3E-48 T 10-11-2016 IPR012675 Beta-grasp domain CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 SUPERFAMILY SSF81271 283 367 1.87E-35 T 10-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 Gene3D G3DSA:3.40.50.300 4 131 1.9E-42 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04485 a780c41240b2dad6ef37817515d8ecfd 367 Gene3D G3DSA:3.40.50.300 204 270 1.9E-42 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06935 0e21edf10e41a46775db93ff9f80482d 223 SUPERFAMILY SSF53850 1 222 3.53E-50 T 10-11-2016 CJM129_RS06935 0e21edf10e41a46775db93ff9f80482d 223 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 223 24.364 T 10-11-2016 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CJM129_RS06935 0e21edf10e41a46775db93ff9f80482d 223 PANTHER PTHR37690 1 222 9.2E-13 T 10-11-2016 CJM129_RS06935 0e21edf10e41a46775db93ff9f80482d 223 Gene3D G3DSA:3.40.190.10 107 142 2.3E-7 T 10-11-2016 CJM129_RS06935 0e21edf10e41a46775db93ff9f80482d 223 Gene3D G3DSA:3.40.190.10 143 222 1.7E-26 T 10-11-2016 CJM129_RS06935 0e21edf10e41a46775db93ff9f80482d 223 Gene3D G3DSA:3.40.190.10 3 75 1.7E-26 T 10-11-2016 CJM129_RS06935 0e21edf10e41a46775db93ff9f80482d 223 Pfam PF02621 Menaquinone biosynthesis 4 105 5.7E-10 T 10-11-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 Pfam PF01678 Diaminopimelate epimerase 3 116 1.1E-22 T 10-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 Pfam PF01678 Diaminopimelate epimerase 133 223 7.9E-12 T 10-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 Gene3D G3DSA:3.10.310.10 110 223 1.0E-25 T 10-11-2016 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 2 246 2.1E-59 T 10-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 PANTHER PTHR31689 1 249 1.0E-47 T 10-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 SUPERFAMILY SSF54506 126 246 1.5E-28 T 10-11-2016 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 Gene3D G3DSA:3.10.310.10 1 109 6.9E-32 T 10-11-2016 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 10-11-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 248 26.993 T 10-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS08130 623c7235aae5fb8e558b5b75fd57ea95 249 SUPERFAMILY SSF54506 1 115 2.92E-30 T 10-11-2016 CJM129_RS06305 452ab1947dcb6fa56e524f94782de592 419 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 170 355 1.1E-10 T 10-11-2016 IPR004477 ComEC/Rec2-related protein CJM129_RS06305 452ab1947dcb6fa56e524f94782de592 419 Pfam PF03772 Competence protein 158 361 1.8E-20 T 10-11-2016 IPR004477 ComEC/Rec2-related protein CJM129_RS05405 b4fbd1074afd69f5a02b56949107555d 191 SUPERFAMILY SSF53271 45 189 6.08E-12 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS05405 b4fbd1074afd69f5a02b56949107555d 191 Gene3D G3DSA:3.40.50.2020 149 188 2.2E-8 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS04600 f94549fc5df8be1649dbe0bd38d18b25 295 Pfam PF01545 Cation efflux family 9 202 1.3E-40 T 10-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJM129_RS04600 f94549fc5df8be1649dbe0bd38d18b25 295 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 286 1.9E-80 T 10-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJM129_RS04600 f94549fc5df8be1649dbe0bd38d18b25 295 Gene3D G3DSA:3.30.70.1350 203 287 5.3E-20 T 10-11-2016 IPR027470 Cation efflux protein, cytoplasmic domain CJM129_RS04600 f94549fc5df8be1649dbe0bd38d18b25 295 SUPERFAMILY SSF160240 205 286 1.83E-16 T 10-11-2016 CJM129_RS04600 f94549fc5df8be1649dbe0bd38d18b25 295 SUPERFAMILY SSF161111 3 204 3.01E-49 T 10-11-2016 CJM129_RS04600 f94549fc5df8be1649dbe0bd38d18b25 295 Gene3D G3DSA:1.20.1510.10 5 202 2.4E-42 T 10-11-2016 IPR027469 Cation efflux protein transmembrane domain CJM129_RS04600 f94549fc5df8be1649dbe0bd38d18b25 295 PANTHER PTHR11562:SF55 5 294 1.1E-72 T 10-11-2016 CJM129_RS04600 f94549fc5df8be1649dbe0bd38d18b25 295 PANTHER PTHR11562 5 294 1.1E-72 T 10-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJM129_RS04600 f94549fc5df8be1649dbe0bd38d18b25 295 Pfam PF16916 Dimerisation domain of Zinc Transporter 206 285 1.3E-15 T 10-11-2016 IPR027470 Cation efflux protein, cytoplasmic domain CJM129_RS03665 190cef7cbcf93a96060f41e5e861ad7d 425 Pfam PF01420 Type I restriction modification DNA specificity domain 16 179 8.6E-23 T 10-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CJM129_RS03665 190cef7cbcf93a96060f41e5e861ad7d 425 Pfam PF01420 Type I restriction modification DNA specificity domain 228 405 2.9E-14 T 10-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CJM129_RS03665 190cef7cbcf93a96060f41e5e861ad7d 425 SUPERFAMILY SSF116734 4 209 1.06E-48 T 10-11-2016 CJM129_RS03665 190cef7cbcf93a96060f41e5e861ad7d 425 SUPERFAMILY SSF116734 213 424 8.67E-45 T 10-11-2016 CJM129_RS03665 190cef7cbcf93a96060f41e5e861ad7d 425 PANTHER PTHR30408:SF6 5 238 5.8E-30 T 10-11-2016 CJM129_RS03665 190cef7cbcf93a96060f41e5e861ad7d 425 PANTHER PTHR30408 5 238 5.8E-30 T 10-11-2016 CJM129_RS06620 476a67446d5ff8b260e1e7d3a7f9b575 239 SUPERFAMILY SSF53633 4 229 3.01E-66 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS06620 476a67446d5ff8b260e1e7d3a7f9b575 239 PANTHER PTHR21499 5 228 1.7E-95 T 10-11-2016 CJM129_RS06620 476a67446d5ff8b260e1e7d3a7f9b575 239 Gene3D G3DSA:3.40.1160.10 2 230 5.9E-76 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS06620 476a67446d5ff8b260e1e7d3a7f9b575 239 PIRSF PIRSF005650 1 239 9.5E-87 T 10-11-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CJM129_RS06620 476a67446d5ff8b260e1e7d3a7f9b575 239 PANTHER PTHR21499:SF23 5 228 1.7E-95 T 10-11-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CJM129_RS06620 476a67446d5ff8b260e1e7d3a7f9b575 239 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 231 2.2E-94 T 10-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CJM129_RS06620 476a67446d5ff8b260e1e7d3a7f9b575 239 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 237 41.351 T 10-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 CJM129_RS06620 476a67446d5ff8b260e1e7d3a7f9b575 239 Pfam PF00696 Amino acid kinase family 5 215 1.2E-32 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 PANTHER PTHR20861:SF2 1 251 8.1E-31 T 10-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 SUPERFAMILY SSF55060 171 252 2.45E-6 T 10-11-2016 IPR013750 GHMP kinase, C-terminal domain CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 Pfam PF00288 GHMP kinases N terminal domain 88 144 2.4E-6 T 10-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 255 19.08 T 10-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 PIRSF PIRSF010376 1 255 8.9E-61 T 10-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 252 1.1E-45 T 10-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 Gene3D G3DSA:3.30.70.890 171 251 1.6E-5 T 10-11-2016 IPR013750 GHMP kinase, C-terminal domain CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 PANTHER PTHR20861 1 251 8.1E-31 T 10-11-2016 CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 Gene3D G3DSA:3.30.230.10 2 160 1.6E-30 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS05785 fb0ab20186ac6fb2bf60f535c1e0a2fa 255 SUPERFAMILY SSF54211 2 157 2.66E-27 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS04910 0ef7660d21e48c27a6d499a4e8ccd732 373 SUPERFAMILY SSF51713 1 370 3.01E-141 T 10-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS04910 0ef7660d21e48c27a6d499a4e8ccd732 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 367 2.8E-81 T 10-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS04910 0ef7660d21e48c27a6d499a4e8ccd732 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 52.463 T 10-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS04910 0ef7660d21e48c27a6d499a4e8ccd732 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 370 3.7E-142 T 10-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS04910 0ef7660d21e48c27a6d499a4e8ccd732 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 370 4.3E-137 T 10-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS04910 0ef7660d21e48c27a6d499a4e8ccd732 373 PANTHER PTHR21148 1 371 4.8E-140 T 10-11-2016 CJM129_RS04910 0ef7660d21e48c27a6d499a4e8ccd732 373 Gene3D G3DSA:3.20.20.105 1 369 4.4E-144 T 10-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS04910 0ef7660d21e48c27a6d499a4e8ccd732 373 PANTHER PTHR21148:SF26 1 371 4.8E-140 T 10-11-2016 CJM129_RS01115 1878138bb47afa2a1544a8b4b952e86d 456 Gene3D G3DSA:3.20.140.10 4 383 1.6E-116 T 10-11-2016 CJM129_RS01115 1878138bb47afa2a1544a8b4b952e86d 456 PIRSF PIRSF000484 1 455 3.5E-145 T 10-11-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 CJM129_RS01115 1878138bb47afa2a1544a8b4b952e86d 456 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 8 444 1.3E-184 T 10-11-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 CJM129_RS01115 1878138bb47afa2a1544a8b4b952e86d 456 SUPERFAMILY SSF54675 4 137 5.1E-47 T 10-11-2016 CJM129_RS01115 1878138bb47afa2a1544a8b4b952e86d 456 SUPERFAMILY SSF51690 138 453 7.95E-101 T 10-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 CJM129_RS01115 1878138bb47afa2a1544a8b4b952e86d 456 PANTHER PTHR11098 7 455 1.1E-153 T 10-11-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 CJM129_RS01115 1878138bb47afa2a1544a8b4b952e86d 456 PANTHER PTHR11098:SF13 7 455 1.1E-153 T 10-11-2016 CJM129_RS01115 1878138bb47afa2a1544a8b4b952e86d 456 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 153 352 1.9E-8 T 10-11-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 CJM129_RS07635 447ce8b2f0907fd666ea867aff121a32 181 SUPERFAMILY SSF51182 8 177 2.18E-46 T 10-11-2016 IPR011051 RmlC-like cupin domain CJM129_RS07635 447ce8b2f0907fd666ea867aff121a32 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 15 173 2.0E-87 T 10-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CJM129_RS07635 447ce8b2f0907fd666ea867aff121a32 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 13 176 4.4E-41 T 10-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CJM129_RS07635 447ce8b2f0907fd666ea867aff121a32 181 Gene3D G3DSA:2.60.120.10 12 176 1.3E-47 T 10-11-2016 IPR014710 RmlC-like jelly roll fold CJM129_RS07635 447ce8b2f0907fd666ea867aff121a32 181 PANTHER PTHR21047 1 173 6.4E-32 T 10-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CJM129_RS03680 832b28283979b374f744b9d44ccc2a37 343 PANTHER PTHR15032:SF4 81 340 1.4E-69 T 10-11-2016 CJM129_RS03680 832b28283979b374f744b9d44ccc2a37 343 Gene3D G3DSA:3.60.15.10 48 341 2.9E-78 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS03680 832b28283979b374f744b9d44ccc2a37 343 Pfam PF12706 Beta-lactamase superfamily domain 98 294 3.0E-34 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS03680 832b28283979b374f744b9d44ccc2a37 343 SUPERFAMILY SSF56281 76 307 1.27E-32 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS03680 832b28283979b374f744b9d44ccc2a37 343 PANTHER PTHR15032 81 340 1.4E-69 T 10-11-2016 CJM129_RS01495 37e44abbecd3dda794273bcc03823d89 255 Gene3D G3DSA:3.40.50.1000 2 72 2.4E-20 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS01495 37e44abbecd3dda794273bcc03823d89 255 Gene3D G3DSA:3.40.50.1000 169 251 2.4E-20 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS01495 37e44abbecd3dda794273bcc03823d89 255 SUPERFAMILY SSF56784 2 247 1.25E-34 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS01495 37e44abbecd3dda794273bcc03823d89 255 Pfam PF13344 Haloacid dehalogenase-like hydrolase 2 98 4.3E-17 T 10-11-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA CJM129_RS01495 37e44abbecd3dda794273bcc03823d89 255 Pfam PF13242 HAD-hyrolase-like 170 230 2.0E-8 T 10-11-2016 CJM129_RS01495 37e44abbecd3dda794273bcc03823d89 255 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 2 224 1.7E-59 T 10-11-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA CJM129_RS01495 37e44abbecd3dda794273bcc03823d89 255 PANTHER PTHR19288 2 252 2.6E-23 T 10-11-2016 CJM129_RS01495 37e44abbecd3dda794273bcc03823d89 255 Gene3D G3DSA:3.40.50.10410 73 168 5.4E-15 T 10-11-2016 IPR023215 Nitrophenylphosphatase-like domain CJM129_RS09015 5ead5dbbf642039f1a8dceca8d692d21 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 8 118 22.639 T 10-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09015 5ead5dbbf642039f1a8dceca8d692d21 118 Gene3D G3DSA:3.30.420.100 28 117 3.0E-24 T 10-11-2016 CJM129_RS09015 5ead5dbbf642039f1a8dceca8d692d21 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 12 118 9.3E-37 T 10-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09015 5ead5dbbf642039f1a8dceca8d692d21 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 117 7.3E-36 T 10-11-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09015 5ead5dbbf642039f1a8dceca8d692d21 118 SUPERFAMILY SSF53137 10 116 1.72E-37 T 10-11-2016 CJM129_RS09015 5ead5dbbf642039f1a8dceca8d692d21 118 PANTHER PTHR12899 13 118 1.9E-17 T 10-11-2016 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 PIRSF PIRSF002158 7 276 1.0E-92 T 10-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 1.1E-55 T 10-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.695 T 10-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 SMART SM01383 42 118 1.2E-41 T 10-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 Gene3D G3DSA:2.30.30.30 123 196 3.9E-34 T 10-11-2016 IPR014722 Ribosomal protein L2 domain 2 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 SUPERFAMILY SSF50249 2 118 3.77E-40 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 Gene3D G3DSA:4.10.950.10 197 274 4.3E-32 T 10-11-2016 IPR014726 Ribosomal protein L2, domain 3 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 SUPERFAMILY SSF50104 127 273 6.62E-60 T 10-11-2016 IPR008991 Translation protein SH3-like domain CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 PANTHER PTHR13691 1 274 1.3E-124 T 10-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 SMART SM01382 125 253 5.8E-91 T 10-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 1.6E-130 T 10-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 1.1E-29 T 10-11-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 Gene3D G3DSA:2.40.50.140 1 114 1.1E-42 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 10-11-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 CJM129_RS09080 497462631dbf0a47cec1288fc8efed8c 276 PANTHER PTHR13691:SF5 1 274 1.3E-124 T 10-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 PANTHER PTHR21327:SF6 1 332 2.0E-103 T 10-11-2016 CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 PIRSF PIRSF001259 1 294 5.9E-83 T 10-11-2016 CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 37.264 T 10-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 SUPERFAMILY SSF55821 2 202 1.51E-79 T 10-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 197 2.4E-80 T 10-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 198 3.8E-75 T 10-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 Pfam PF00925 GTP cyclohydrolase II 291 333 1.7E-6 T 10-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 SUPERFAMILY SSF142695 223 333 3.14E-16 T 10-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 Gene3D G3DSA:3.90.870.10 1 208 1.2E-90 T 10-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CJM129_RS02765 5aab851093525b67868e5e51793b76e2 339 PANTHER PTHR21327 1 332 2.0E-103 T 10-11-2016 CJM129_RS08350 a8a23d603ddaebd6f70a8759aa2033ab 167 PANTHER PTHR11995 10 165 3.9E-88 T 10-11-2016 CJM129_RS08350 a8a23d603ddaebd6f70a8759aa2033ab 167 Gene3D G3DSA:3.40.50.700 25 155 3.6E-31 T 10-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CJM129_RS08350 a8a23d603ddaebd6f70a8759aa2033ab 167 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 40 146 5.7E-22 T 10-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CJM129_RS08350 a8a23d603ddaebd6f70a8759aa2033ab 167 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 10 153 40.744 T 10-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 CJM129_RS08350 a8a23d603ddaebd6f70a8759aa2033ab 167 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 14 155 5.3E-71 T 10-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 CJM129_RS08350 a8a23d603ddaebd6f70a8759aa2033ab 167 SUPERFAMILY SSF56770 14 157 2.62E-62 T 10-11-2016 CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 4 448 1.3E-191 T 10-11-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 SUPERFAMILY SSF51246 332 450 2.93E-37 T 10-11-2016 IPR011054 Rudiment single hybrid motif CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 Gene3D G3DSA:3.40.50.20 4 129 9.3E-49 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 324 2.2E-76 T 10-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 SUPERFAMILY SSF52440 3 114 1.44E-44 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 111 4.4E-44 T 10-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 10-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 SUPERFAMILY SSF56059 84 350 6.19E-68 T 10-11-2016 CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 PANTHER PTHR18866 4 473 2.8E-271 T 10-11-2016 CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 Gene3D G3DSA:3.30.1490.20 130 204 3.7E-29 T 10-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 Pfam PF02785 Biotin carboxylase C-terminal domain 338 444 2.3E-35 T 10-11-2016 IPR005482 Biotin carboxylase, C-terminal CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 10-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 SMART SM00878 338 444 5.8E-50 T 10-11-2016 IPR005482 Biotin carboxylase, C-terminal CJM129_RS05450 a7fa8967a2cde230639ccb5f79677536 481 Gene3D G3DSA:3.30.470.20 207 450 3.3E-96 T 10-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CJM129_RS04745 6b58cf2ec485c4b469009de65ca0a6eb 291 Pfam PF08003 Protein of unknown function (DUF1698) 23 287 3.7E-81 T 10-11-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like CJM129_RS04745 6b58cf2ec485c4b469009de65ca0a6eb 291 PANTHER PTHR10108:SF847 33 291 2.1E-47 T 10-11-2016 CJM129_RS04745 6b58cf2ec485c4b469009de65ca0a6eb 291 SUPERFAMILY SSF53335 58 284 1.61E-26 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS04745 6b58cf2ec485c4b469009de65ca0a6eb 291 PANTHER PTHR10108 33 291 2.1E-47 T 10-11-2016 CJM129_RS04745 6b58cf2ec485c4b469009de65ca0a6eb 291 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 20 287 3.5E-90 T 10-11-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 CJM129_RS04745 6b58cf2ec485c4b469009de65ca0a6eb 291 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 1 291 45.212 T 10-11-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 CJM129_RS04745 6b58cf2ec485c4b469009de65ca0a6eb 291 Gene3D G3DSA:3.40.50.150 88 262 9.7E-22 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS08960 94f532b0fc225e3778264adc5087d7b4 258 Gene3D G3DSA:3.30.465.10 63 188 9.6E-21 T 10-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJM129_RS08960 94f532b0fc225e3778264adc5087d7b4 258 PANTHER PTHR21071 31 258 3.0E-44 T 10-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08960 94f532b0fc225e3778264adc5087d7b4 258 SUPERFAMILY SSF56176 26 156 4.09E-15 T 10-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJM129_RS08960 94f532b0fc225e3778264adc5087d7b4 258 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 18 258 9.5E-49 T 10-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08960 94f532b0fc225e3778264adc5087d7b4 258 Gene3D G3DSA:3.90.78.10 189 258 2.4E-28 T 10-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08960 94f532b0fc225e3778264adc5087d7b4 258 SUPERFAMILY SSF56194 176 258 5.1E-28 T 10-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08960 94f532b0fc225e3778264adc5087d7b4 258 PANTHER PTHR21071:SF4 31 258 3.0E-44 T 10-11-2016 CJM129_RS08960 94f532b0fc225e3778264adc5087d7b4 258 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 258 44.343 T 10-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08960 94f532b0fc225e3778264adc5087d7b4 258 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 170 258 2.3E-24 T 10-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 Gene3D G3DSA:3.40.50.620 178 228 2.6E-39 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 Gene3D G3DSA:3.40.50.620 2 65 2.6E-39 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 1.7E-22 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 176 186 1.7E-22 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 200 1.7E-22 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 1.7E-22 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 28 1.7E-22 T 10-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 PANTHER PTHR11451:SF41 3 315 8.5E-66 T 10-11-2016 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 422 1.0E-132 T 10-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 SUPERFAMILY SSF48163 276 421 7.06E-23 T 10-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 SUPERFAMILY SSF52374 2 295 1.13E-84 T 10-11-2016 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 6 17 - T 10-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 300 1.1E-78 T 10-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 PANTHER PTHR11451 3 315 8.5E-66 T 10-11-2016 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 Gene3D G3DSA:1.10.1160.10 230 310 1.6E-25 T 10-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 Gene3D G3DSA:3.90.800.10 66 177 8.7E-27 T 10-11-2016 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 Gene3D G3DSA:1.10.10.350 354 417 1.5E-6 T 10-11-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJM129_RS04085 94be9760d6113261a7b5d0cae59aa3d6 431 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 1 429 24.142 T 10-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 Gene3D G3DSA:3.20.20.70 10 354 5.8E-121 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 166 177 - T 10-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 PIRSF PIRSF001359 12 354 1.5E-89 T 10-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 353 5.8E-164 T 10-11-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 SUPERFAMILY SSF51569 1 353 3.22E-127 T 10-11-2016 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 PANTHER PTHR30559:SF0 1 355 1.0E-224 T 10-11-2016 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 95 106 - T 10-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 13 353 1.4E-107 T 10-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 Pfam PF01116 Fructose-bisphosphate aldolase class-II 16 353 8.7E-90 T 10-11-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CJM129_RS02890 4e3fca42bf8d3a2dd326fb36380042a3 357 PANTHER PTHR30559 1 355 1.0E-224 T 10-11-2016 CJM129_RS05040 40fa8e907782b9e35e4fa57782df2900 195 SUPERFAMILY SSF53955 44 195 5.63E-31 T 10-11-2016 IPR023346 Lysozyme-like domain CJM129_RS05040 40fa8e907782b9e35e4fa57782df2900 195 PANTHER PTHR38107 46 195 3.2E-13 T 10-11-2016 CJM129_RS05040 40fa8e907782b9e35e4fa57782df2900 195 Pfam PF00959 Phage lysozyme 84 193 5.0E-11 T 10-11-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CJM129_RS05040 40fa8e907782b9e35e4fa57782df2900 195 PANTHER PTHR38107:SF2 46 195 3.2E-13 T 10-11-2016 CJM129_RS05040 40fa8e907782b9e35e4fa57782df2900 195 Gene3D G3DSA:1.10.530.40 49 195 5.2E-32 T 10-11-2016 IPR023347 Lysozyme domain GO:0003796 CJM129_RS00195 efe3ff749c0e7c5ec13dba1d56105eaa 306 Pfam PF07690 Major Facilitator Superfamily 20 273 6.2E-34 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS00195 efe3ff749c0e7c5ec13dba1d56105eaa 306 PANTHER PTHR23502:SF19 12 267 1.9E-79 T 10-11-2016 CJM129_RS00195 efe3ff749c0e7c5ec13dba1d56105eaa 306 Gene3D G3DSA:1.20.1250.20 12 194 5.1E-26 T 10-11-2016 CJM129_RS00195 efe3ff749c0e7c5ec13dba1d56105eaa 306 SUPERFAMILY SSF103473 9 271 4.58E-46 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS00195 efe3ff749c0e7c5ec13dba1d56105eaa 306 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 12 271 2.3E-70 T 10-11-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CJM129_RS00195 efe3ff749c0e7c5ec13dba1d56105eaa 306 PANTHER PTHR23502 12 267 1.9E-79 T 10-11-2016 CJM129_RS02870 3a9bc86c03d9a613fd8a0cf67c1c5327 210 PANTHER PTHR30506:SF2 2 209 1.1E-102 T 10-11-2016 CJM129_RS02870 3a9bc86c03d9a613fd8a0cf67c1c5327 210 Pfam PF03458 UPF0126 domain 96 167 8.4E-20 T 10-11-2016 IPR005115 Uncharacterised domain UPF0126 CJM129_RS02870 3a9bc86c03d9a613fd8a0cf67c1c5327 210 Pfam PF03458 UPF0126 domain 11 81 1.6E-19 T 10-11-2016 IPR005115 Uncharacterised domain UPF0126 CJM129_RS02870 3a9bc86c03d9a613fd8a0cf67c1c5327 210 PANTHER PTHR30506 2 209 1.1E-102 T 10-11-2016 CJM129_RS00030 69fbcb9a2b7b9c6bf485dc0ae6b1bb67 433 Pfam PF13726 Na+-H+ antiporter family 6 92 2.5E-27 T 10-11-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal CJM129_RS00030 69fbcb9a2b7b9c6bf485dc0ae6b1bb67 433 PANTHER PTHR37821 4 433 3.3E-141 T 10-11-2016 CJM129_RS00030 69fbcb9a2b7b9c6bf485dc0ae6b1bb67 433 Pfam PF03553 Na+/H+ antiporter family 146 424 4.1E-55 T 10-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CJM129_RS05095 ef71c9ebb3f8edf886635b21485a4102 161 PIRSF PIRSF028301 1 161 1.9E-55 T 10-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CJM129_RS05095 ef71c9ebb3f8edf886635b21485a4102 161 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 6 154 4.1E-52 T 10-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CJM129_RS05095 ef71c9ebb3f8edf886635b21485a4102 161 PANTHER PTHR35850:SF2 1 154 9.8E-60 T 10-11-2016 CJM129_RS05095 ef71c9ebb3f8edf886635b21485a4102 161 PANTHER PTHR35850 1 154 9.8E-60 T 10-11-2016 CJM129_RS05095 ef71c9ebb3f8edf886635b21485a4102 161 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 4 156 3.3E-54 T 10-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CJM129_RS00340 4a74f9b7b6e0c817be49b8e5c06d62ff 157 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 30 157 6.2E-38 T 10-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CJM129_RS00340 4a74f9b7b6e0c817be49b8e5c06d62ff 157 SUPERFAMILY SSF55083 29 154 1.31E-32 T 10-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CJM129_RS00340 4a74f9b7b6e0c817be49b8e5c06d62ff 157 PANTHER PTHR20941 4 157 3.1E-28 T 10-11-2016 CJM129_RS00340 4a74f9b7b6e0c817be49b8e5c06d62ff 157 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 32 155 2.0E-20 T 10-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CJM129_RS00340 4a74f9b7b6e0c817be49b8e5c06d62ff 157 Gene3D G3DSA:3.30.70.560 30 155 9.1E-32 T 10-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CJM129_RS00340 4a74f9b7b6e0c817be49b8e5c06d62ff 157 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 114 125 - T 10-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 CJM129_RS07915 05075fecede80e9395edb4098345c189 87 TIGRFAM TIGR02736 cbb3_Q_epsi: cytochrome c oxidase, cbb3-type, CcoQ subunit 32 86 3.4E-31 T 10-11-2016 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ CJM129_RS07915 05075fecede80e9395edb4098345c189 87 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 27 75 7.5E-14 T 10-11-2016 IPR008621 Cbb3-type cytochrome oxidase component CJM129_RS07240 3483cf894c3488560a1a31e14f8fc129 191 PANTHER PTHR19136:SF81 4 189 4.4E-17 T 10-11-2016 CJM129_RS07240 3483cf894c3488560a1a31e14f8fc129 191 SUPERFAMILY SSF53448 7 186 1.35E-22 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07240 3483cf894c3488560a1a31e14f8fc129 191 Pfam PF12804 MobA-like NTP transferase domain 8 149 5.8E-17 T 10-11-2016 IPR025877 MobA-like NTP transferase CJM129_RS07240 3483cf894c3488560a1a31e14f8fc129 191 PANTHER PTHR19136 4 189 4.4E-17 T 10-11-2016 CJM129_RS07240 3483cf894c3488560a1a31e14f8fc129 191 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 4 186 22.146 T 10-11-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 CJM129_RS07240 3483cf894c3488560a1a31e14f8fc129 191 Gene3D G3DSA:3.90.550.10 4 189 1.5E-42 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS09055 c2a9ceed8030b5f1bfdeab32bfd458e5 61 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 10-11-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09055 c2a9ceed8030b5f1bfdeab32bfd458e5 61 Gene3D G3DSA:1.10.287.310 1 58 1.5E-17 T 10-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09055 c2a9ceed8030b5f1bfdeab32bfd458e5 61 Pfam PF00831 Ribosomal L29 protein 5 58 1.5E-16 T 10-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09055 c2a9ceed8030b5f1bfdeab32bfd458e5 61 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 58 1.0E-19 T 10-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09055 c2a9ceed8030b5f1bfdeab32bfd458e5 61 SUPERFAMILY SSF46561 1 59 1.11E-14 T 10-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09055 c2a9ceed8030b5f1bfdeab32bfd458e5 61 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 14.456 T 10-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 PANTHER PTHR10209:SF68 1 309 3.1E-67 T 10-11-2016 CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 SUPERFAMILY SSF51197 1 275 8.93E-71 T 10-11-2016 CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 Gene3D G3DSA:2.60.120.330 1 276 4.8E-75 T 10-11-2016 IPR027443 Isopenicillin N synthase-like CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 171 264 4.9E-20 T 10-11-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 PANTHER PTHR10209 1 309 3.1E-67 T 10-11-2016 CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 3 124 4.4E-26 T 10-11-2016 IPR026992 Non-haem dioxygenase N-terminal domain CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 PRINTS PR00682 Isopenicillin N synthase signature 227 253 6.7E-9 T 10-11-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 PRINTS PR00682 Isopenicillin N synthase signature 192 213 6.7E-9 T 10-11-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 PRINTS PR00682 Isopenicillin N synthase signature 254 272 6.7E-9 T 10-11-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 CJM129_RS06245 5fdee2a55a4fd85c89db130ccc7c9c69 330 PRINTS PR00682 Isopenicillin N synthase signature 22 39 6.7E-9 T 10-11-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 CJM129_RS07670 093b610e7ad816f3a20673cee08a2251 97 Gene3D G3DSA:1.10.1200.10 1 96 5.4E-9 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS07670 093b610e7ad816f3a20673cee08a2251 97 SUPERFAMILY SSF47336 1 94 1.99E-5 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS03705 42116ab424403896874f445718450bb8 408 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 400 2.4E-135 T 10-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CJM129_RS03705 42116ab424403896874f445718450bb8 408 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 406 28.286 T 10-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 CJM129_RS03705 42116ab424403896874f445718450bb8 408 Gene3D G3DSA:3.40.50.800 323 407 6.9E-14 T 10-11-2016 IPR004154 Anticodon-binding CJM129_RS03705 42116ab424403896874f445718450bb8 408 Pfam PF13393 Histidyl-tRNA synthetase 7 307 4.4E-44 T 10-11-2016 CJM129_RS03705 42116ab424403896874f445718450bb8 408 PANTHER PTHR11476 1 408 1.5E-154 T 10-11-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CJM129_RS03705 42116ab424403896874f445718450bb8 408 SUPERFAMILY SSF52954 322 408 3.27E-14 T 10-11-2016 IPR004154 Anticodon-binding CJM129_RS03705 42116ab424403896874f445718450bb8 408 PANTHER PTHR11476:SF9 1 408 1.5E-154 T 10-11-2016 CJM129_RS03705 42116ab424403896874f445718450bb8 408 SUPERFAMILY SSF55681 2 313 1.65E-86 T 10-11-2016 CJM129_RS03705 42116ab424403896874f445718450bb8 408 Gene3D G3DSA:3.30.930.10 3 181 3.2E-87 T 10-11-2016 CJM129_RS03705 42116ab424403896874f445718450bb8 408 Gene3D G3DSA:3.30.930.10 216 316 3.2E-87 T 10-11-2016 CJM129_RS03705 42116ab424403896874f445718450bb8 408 Pfam PF03129 Anticodon binding domain 334 408 1.7E-6 T 10-11-2016 IPR004154 Anticodon-binding CJM129_RS03705 42116ab424403896874f445718450bb8 408 PIRSF PIRSF001549 1 408 1.6E-116 T 10-11-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 CJM129_RS08145 efc531785ba1a02fb774c6011f1679cc 149 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 49 65 7.1E-11 T 10-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJM129_RS08145 efc531785ba1a02fb774c6011f1679cc 149 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 25 41 7.1E-11 T 10-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJM129_RS08145 efc531785ba1a02fb774c6011f1679cc 149 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 121 139 7.1E-11 T 10-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJM129_RS08145 efc531785ba1a02fb774c6011f1679cc 149 PIRSF PIRSF005900 1 149 2.2E-45 T 10-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJM129_RS08145 efc531785ba1a02fb774c6011f1679cc 149 PANTHER PTHR30295 3 146 3.6E-30 T 10-11-2016 CJM129_RS08145 efc531785ba1a02fb774c6011f1679cc 149 SUPERFAMILY SSF47240 3 144 2.71E-38 T 10-11-2016 IPR009078 Ferritin-like superfamily CJM129_RS08145 efc531785ba1a02fb774c6011f1679cc 149 Pfam PF00210 Ferritin-like domain 5 144 6.6E-28 T 10-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CJM129_RS08145 efc531785ba1a02fb774c6011f1679cc 149 Gene3D G3DSA:1.20.1260.10 3 145 2.0E-42 T 10-11-2016 IPR012347 Ferritin-related CJM129_RS08145 efc531785ba1a02fb774c6011f1679cc 149 PANTHER PTHR30295:SF6 3 146 3.6E-30 T 10-11-2016 CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 86 3.0E-42 T 10-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 178 21.571 T 10-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 Gene3D G3DSA:2.170.120.20 97 177 2.1E-23 T 10-11-2016 IPR020057 Ribosomal protein L25, beta domain CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 PANTHER PTHR33284 1 178 2.0E-30 T 10-11-2016 CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 Gene3D G3DSA:2.40.240.10 2 87 8.8E-19 T 10-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 2 174 2.7E-51 T 10-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 177 3.4E-21 T 10-11-2016 IPR020057 Ribosomal protein L25, beta domain CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 PANTHER PTHR33284:SF1 1 178 2.0E-30 T 10-11-2016 CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 SUPERFAMILY SSF50715 6 175 1.15E-44 T 10-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 CJM129_RS01475 412eadb5ed1b0223f99410212e9341d8 178 Pfam PF01386 Ribosomal L25p family 2 87 8.9E-17 T 10-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CJM129_RS01300 f31a5b6248ec845eeacce095d10042db 151 PANTHER PTHR10681 3 151 2.0E-50 T 10-11-2016 CJM129_RS01300 f31a5b6248ec845eeacce095d10042db 151 Pfam PF00578 AhpC/TSA family 5 133 5.5E-38 T 10-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CJM129_RS01300 f31a5b6248ec845eeacce095d10042db 151 Gene3D G3DSA:3.40.30.10 2 151 9.2E-51 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS01300 f31a5b6248ec845eeacce095d10042db 151 PIRSF PIRSF000239 1 151 6.3E-28 T 10-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 CJM129_RS01300 f31a5b6248ec845eeacce095d10042db 151 SUPERFAMILY SSF52833 3 151 1.46E-48 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS05870 d8ef34fd5cd5fdbf56e3d5663b18d9c2 386 PANTHER PTHR30244 1 288 1.2E-108 T 10-11-2016 CJM129_RS05870 d8ef34fd5cd5fdbf56e3d5663b18d9c2 386 Gene3D G3DSA:3.40.640.10 4 243 2.8E-91 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS05870 d8ef34fd5cd5fdbf56e3d5663b18d9c2 386 Gene3D G3DSA:3.90.1150.10 245 385 4.1E-44 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS05870 d8ef34fd5cd5fdbf56e3d5663b18d9c2 386 SUPERFAMILY SSF53383 3 384 4.84E-88 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS05870 d8ef34fd5cd5fdbf56e3d5663b18d9c2 386 PANTHER PTHR30244 313 386 1.2E-108 T 10-11-2016 CJM129_RS05870 d8ef34fd5cd5fdbf56e3d5663b18d9c2 386 PANTHER PTHR30244:SF18 1 288 1.2E-108 T 10-11-2016 CJM129_RS05870 d8ef34fd5cd5fdbf56e3d5663b18d9c2 386 PANTHER PTHR30244:SF18 313 386 1.2E-108 T 10-11-2016 CJM129_RS05870 d8ef34fd5cd5fdbf56e3d5663b18d9c2 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 377 5.8E-80 T 10-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJM129_RS05870 d8ef34fd5cd5fdbf56e3d5663b18d9c2 386 PIRSF PIRSF000390 1 386 1.0E-84 T 10-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJM129_RS08465 3827b979ee717050bdf08d06d546f321 243 PANTHER PTHR21235:SF15 3 243 1.6E-88 T 10-11-2016 CJM129_RS08465 3827b979ee717050bdf08d06d546f321 243 Pfam PF00977 Histidine biosynthesis protein 3 232 2.4E-72 T 10-11-2016 IPR006062 Histidine biosynthesis GO:0000105 CJM129_RS08465 3827b979ee717050bdf08d06d546f321 243 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 4 236 8.0E-73 T 10-11-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CJM129_RS08465 3827b979ee717050bdf08d06d546f321 243 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 3 240 33.016 T 10-11-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 CJM129_RS08465 3827b979ee717050bdf08d06d546f321 243 PANTHER PTHR21235 3 243 1.6E-88 T 10-11-2016 CJM129_RS08465 3827b979ee717050bdf08d06d546f321 243 Gene3D G3DSA:3.20.20.70 3 241 1.2E-73 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS08465 3827b979ee717050bdf08d06d546f321 243 SUPERFAMILY SSF51366 3 241 2.29E-62 T 10-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 425 748 2.4E-141 T 10-11-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 Gene3D G3DSA:3.20.20.210 388 754 3.7E-125 T 10-11-2016 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 SUPERFAMILY SSF51726 390 753 5.89E-111 T 10-11-2016 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 753 0.0 T 10-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 PANTHER PTHR30519 1 754 0.0 T 10-11-2016 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 SUPERFAMILY SSF51726 5 382 1.44E-84 T 10-11-2016 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 Gene3D G3DSA:3.20.20.210 1 382 1.5E-120 T 10-11-2016 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 3 315 5.0E-110 T 10-11-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 PANTHER PTHR30519:SF0 1 754 0.0 T 10-11-2016 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 753 33.624 T 10-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CJM129_RS06255 9635bcf347ea9e371b665a6d826a5eac 754 PIRSF PIRSF000382 1 754 0.0 T 10-11-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 CJM129_RS00715 5104b51d7ec32c22a01bc927565c35a1 267 Pfam PF00950 ABC 3 transport family 7 261 6.9E-72 T 10-11-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 CJM129_RS00715 5104b51d7ec32c22a01bc927565c35a1 267 PANTHER PTHR30477 1 267 1.2E-70 T 10-11-2016 CJM129_RS00715 5104b51d7ec32c22a01bc927565c35a1 267 SUPERFAMILY SSF81345 4 260 4.84E-37 T 10-11-2016 IPR029022 ABC transporter, BtuC-like CJM129_RS00715 5104b51d7ec32c22a01bc927565c35a1 267 Gene3D G3DSA:1.10.3470.10 15 256 1.4E-10 T 10-11-2016 IPR029022 ABC transporter, BtuC-like CJM129_RS00715 5104b51d7ec32c22a01bc927565c35a1 267 PANTHER PTHR30477:SF0 1 267 1.2E-70 T 10-11-2016 CJM129_RS01165 c61228afffba4802d432b015a9e2b00b 393 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 10-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJM129_RS01165 c61228afffba4802d432b015a9e2b00b 393 Gene3D G3DSA:3.40.640.10 15 249 1.8E-77 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS01165 c61228afffba4802d432b015a9e2b00b 393 Pfam PF00266 Aminotransferase class-V 3 366 8.2E-77 T 10-11-2016 IPR000192 Aminotransferase class V domain CJM129_RS01165 c61228afffba4802d432b015a9e2b00b 393 PIRSF PIRSF005572 1 382 4.6E-117 T 10-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CJM129_RS01165 c61228afffba4802d432b015a9e2b00b 393 TIGRFAM TIGR03403 nifS_epsilon: cysteine desulfurase, NifS family 3 384 2.8E-225 T 10-11-2016 IPR017773 Cysteine desulfurase NifS, proteobacteria GO:0006534|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 CJM129_RS01165 c61228afffba4802d432b015a9e2b00b 393 SUPERFAMILY SSF53383 3 377 1.01E-99 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS01165 c61228afffba4802d432b015a9e2b00b 393 Gene3D G3DSA:3.90.1150.10 250 373 3.1E-42 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS01165 c61228afffba4802d432b015a9e2b00b 393 PANTHER PTHR11601 3 385 1.4E-151 T 10-11-2016 CJM129_RS01165 c61228afffba4802d432b015a9e2b00b 393 PANTHER PTHR11601:SF45 3 385 1.4E-151 T 10-11-2016 CJM129_RS04930 12b53b4aa425fc7e52ec64e58af640df 312 Pfam PF00589 Phage integrase family 130 301 7.5E-24 T 10-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJM129_RS04930 12b53b4aa425fc7e52ec64e58af640df 312 Gene3D G3DSA:1.10.443.10 130 308 8.5E-32 T 10-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJM129_RS04930 12b53b4aa425fc7e52ec64e58af640df 312 Gene3D G3DSA:1.10.150.130 12 102 5.3E-7 T 10-11-2016 IPR023109 Integrase/recombinase, N-terminal CJM129_RS04930 12b53b4aa425fc7e52ec64e58af640df 312 PANTHER PTHR30349 12 311 9.0E-29 T 10-11-2016 CJM129_RS04930 12b53b4aa425fc7e52ec64e58af640df 312 PANTHER PTHR30349:SF20 12 311 9.0E-29 T 10-11-2016 CJM129_RS04930 12b53b4aa425fc7e52ec64e58af640df 312 SUPERFAMILY SSF56349 12 308 7.65E-37 T 10-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJM129_RS09045 0ef912842586817ea5f7adce09d92fe6 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.581 T 10-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJM129_RS09045 0ef912842586817ea5f7adce09d92fe6 122 SUPERFAMILY SSF50193 1 122 3.01E-52 T 10-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJM129_RS09045 0ef912842586817ea5f7adce09d92fe6 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.3E-57 T 10-11-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CJM129_RS09045 0ef912842586817ea5f7adce09d92fe6 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 10-11-2016 IPR019972 Ribosomal protein L14P, conserved site CJM129_RS09045 0ef912842586817ea5f7adce09d92fe6 122 PANTHER PTHR11761 1 122 4.3E-74 T 10-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJM129_RS09045 0ef912842586817ea5f7adce09d92fe6 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 9.9E-55 T 10-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJM129_RS09045 0ef912842586817ea5f7adce09d92fe6 122 Gene3D G3DSA:2.40.150.20 1 122 1.4E-54 T 10-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJM129_RS09045 0ef912842586817ea5f7adce09d92fe6 122 SMART SM01374 1 122 3.4E-84 T 10-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJM129_RS06170 2a9909197d2b09cadf9ec2e083d59647 374 PIRSF PIRSF019225 1 374 1.5E-211 T 10-11-2016 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted CJM129_RS06170 2a9909197d2b09cadf9ec2e083d59647 374 SUPERFAMILY SSF46626 250 359 3.99E-21 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS06170 2a9909197d2b09cadf9ec2e083d59647 374 Gene3D G3DSA:1.20.5.100 340 374 2.5E-9 T 10-11-2016 CJM129_RS06170 2a9909197d2b09cadf9ec2e083d59647 374 Gene3D G3DSA:1.10.760.10 100 207 5.5E-15 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS06170 2a9909197d2b09cadf9ec2e083d59647 374 Gene3D G3DSA:1.10.760.10 247 337 2.5E-14 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS06170 2a9909197d2b09cadf9ec2e083d59647 374 SUPERFAMILY SSF46626 86 205 4.15E-14 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS06170 2a9909197d2b09cadf9ec2e083d59647 374 Pfam PF00034 Cytochrome c 105 207 8.7E-12 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS01830 6d1653b298008fa15c332f36d888842b 154 SUPERFAMILY SSF52121 8 154 5.1E-59 T 10-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS01830 6d1653b298008fa15c332f36d888842b 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 9.8E-57 T 10-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS01830 6d1653b298008fa15c332f36d888842b 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 151 1.8E-54 T 10-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS01830 6d1653b298008fa15c332f36d888842b 154 PANTHER PTHR21058 1 154 7.1E-72 T 10-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS01830 6d1653b298008fa15c332f36d888842b 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 30.065 T 10-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS01830 6d1653b298008fa15c332f36d888842b 154 Gene3D G3DSA:3.40.50.960 6 154 2.0E-61 T 10-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 SUPERFAMILY SSF55031 172 278 9.27E-22 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 4 365 8.8E-158 T 10-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 1 365 41.439 T 10-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 Gene3D G3DSA:3.30.70.360 181 277 1.1E-23 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 Gene3D G3DSA:3.40.630.10 308 365 4.3E-59 T 10-11-2016 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 Gene3D G3DSA:3.40.630.10 4 180 4.3E-59 T 10-11-2016 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 SUPERFAMILY SSF53187 284 365 2.36E-52 T 10-11-2016 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 SUPERFAMILY SSF53187 4 171 2.36E-52 T 10-11-2016 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 Pfam PF01546 Peptidase family M20/M25/M40 61 364 4.6E-39 T 10-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 Pfam PF07687 Peptidase dimerisation domain 168 268 1.8E-14 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 60 69 - T 10-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 PANTHER PTHR11014 5 365 7.8E-64 T 10-11-2016 CJM129_RS05505 437829bbe48b29f460248baae48abb9a 365 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 94 129 - T 10-11-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CJM129_RS05880 e055cdd0706d72ced86d730b4a4c8fcb 200 PANTHER PTHR30576 1 188 2.0E-94 T 10-11-2016 CJM129_RS05880 e055cdd0706d72ced86d730b4a4c8fcb 200 Pfam PF02397 Bacterial sugar transferase 7 180 2.9E-56 T 10-11-2016 IPR003362 Bacterial sugar transferase CJM129_RS05880 e055cdd0706d72ced86d730b4a4c8fcb 200 PANTHER PTHR30576:SF8 1 188 2.0E-94 T 10-11-2016 CJM129_RS05330 56d3e300b7bc1daaa6d0bebc81ef385c 1081 Pfam PF05140 ResB-like family 393 457 2.8E-10 T 10-11-2016 IPR007816 ResB-like domain CJM129_RS05330 56d3e300b7bc1daaa6d0bebc81ef385c 1081 Pfam PF01578 Cytochrome C assembly protein 837 1043 6.9E-43 T 10-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CJM129_RS05330 56d3e300b7bc1daaa6d0bebc81ef385c 1081 PANTHER PTHR30071 761 1080 4.7E-68 T 10-11-2016 CJM129_RS05330 56d3e300b7bc1daaa6d0bebc81ef385c 1081 PANTHER PTHR30071:SF5 761 1080 4.7E-68 T 10-11-2016 CJM129_RS01035 027794a244ef20de7fe339c2d4b8035b 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 254 17.882 T 10-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CJM129_RS01035 027794a244ef20de7fe339c2d4b8035b 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 247 1.6E-71 T 10-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CJM129_RS01035 027794a244ef20de7fe339c2d4b8035b 267 Pfam PF02673 Bacitracin resistance protein BacA 6 249 4.3E-74 T 10-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CJM129_RS01035 027794a244ef20de7fe339c2d4b8035b 267 PANTHER PTHR30622:SF3 1 262 1.2E-100 T 10-11-2016 CJM129_RS01035 027794a244ef20de7fe339c2d4b8035b 267 PANTHER PTHR30622 1 262 1.2E-100 T 10-11-2016 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 PANTHER PTHR11946 4 783 0.0 T 10-11-2016 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 PANTHER PTHR11946 800 862 0.0 T 10-11-2016 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 PANTHER PTHR11946:SF5 4 783 0.0 T 10-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 PANTHER PTHR11946:SF5 800 862 0.0 T 10-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 10-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 869 14.366 T 10-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 Gene3D G3DSA:1.10.287.380 803 866 7.5E-6 T 10-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 Pfam PF08264 Anticodon-binding domain of tRNA 609 747 7.0E-32 T 10-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 SUPERFAMILY SSF50677 189 338 9.16E-58 T 10-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 11 567 2.1E-181 T 10-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 PRINTS PR00986 Valyl-tRNA synthetase signature 343 356 3.5E-24 T 10-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 3.5E-24 T 10-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 PRINTS PR00986 Valyl-tRNA synthetase signature 439 460 3.5E-24 T 10-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 PRINTS PR00986 Valyl-tRNA synthetase signature 228 245 3.5E-24 T 10-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 SUPERFAMILY SSF47323 579 792 3.18E-42 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 Gene3D G3DSA:1.10.730.10 556 712 3.1E-41 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 SUPERFAMILY SSF52374 338 577 2.82E-126 T 10-11-2016 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 SUPERFAMILY SSF52374 5 188 2.82E-126 T 10-11-2016 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 Gene3D G3DSA:3.40.50.620 338 555 3.9E-128 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 Gene3D G3DSA:3.40.50.620 5 191 3.9E-128 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 809 868 4.0E-12 T 10-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 SUPERFAMILY SSF46589 804 868 5.23E-13 T 10-11-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 TIGRFAM TIGR00422 valS: valine--tRNA ligase 2 851 0.0 T 10-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 CJM129_RS03755 f8a2e3295a9c982634510c8b97a6f06b 870 Gene3D G3DSA:3.90.740.10 192 334 2.3E-48 T 10-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 Gene3D G3DSA:3.30.930.10 2 235 2.9E-110 T 10-11-2016 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 SUPERFAMILY SSF101353 240 453 6.15E-61 T 10-11-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 SUPERFAMILY SSF55681 2 239 2.98E-100 T 10-11-2016 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 Gene3D G3DSA:3.30.980.10 656 671 1.2E-5 T 10-11-2016 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 Gene3D G3DSA:3.30.980.10 548 606 1.2E-5 T 10-11-2016 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 SMART SM00863 638 680 3.5E-19 T 10-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 4.0E-30 T 10-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 PRINTS PR00980 Alanyl-tRNA synthetase signature 193 204 4.0E-30 T 10-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 PRINTS PR00980 Alanyl-tRNA synthetase signature 220 233 4.0E-30 T 10-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 305 4.0E-30 T 10-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 PRINTS PR00980 Alanyl-tRNA synthetase signature 268 284 4.0E-30 T 10-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 638 680 1.9E-16 T 10-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 PANTHER PTHR11777:SF9 2 842 0.0 T 10-11-2016 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 PANTHER PTHR11777 2 842 0.0 T 10-11-2016 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 842 166.533 T 10-11-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 2 821 1.3E-293 T 10-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 SUPERFAMILY SSF50447 445 537 4.59E-15 T 10-11-2016 IPR009000 Translation protein, beta-barrel domain CJM129_RS02430 639686699a832169910662d23bee4e9b 842 Pfam PF01411 tRNA synthetases class II (A) 2 540 1.6E-209 T 10-11-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 SUPERFAMILY SSF55186 537 705 7.19E-50 T 10-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CJM129_RS02430 639686699a832169910662d23bee4e9b 842 Pfam PF02272 DHHA1 domain 770 832 3.2E-13 T 10-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CJM129_RS04240 09a85659a884fd25cae2d54177bae060 348 SUPERFAMILY SSF64182 6 318 1.83E-18 T 10-11-2016 CJM129_RS01565 a85231afc92e5aa451867e9540226a65 328 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 328 134.385 T 10-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CJM129_RS01565 a85231afc92e5aa451867e9540226a65 328 PIRSF PIRSF002465 1 328 1.2E-124 T 10-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CJM129_RS01565 a85231afc92e5aa451867e9540226a65 328 PANTHER PTHR30100:SF1 1 323 4.4E-118 T 10-11-2016 CJM129_RS01565 a85231afc92e5aa451867e9540226a65 328 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 325 2.9E-118 T 10-11-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 CJM129_RS01565 a85231afc92e5aa451867e9540226a65 328 SUPERFAMILY SSF53659 1 326 1.81E-94 T 10-11-2016 CJM129_RS01565 a85231afc92e5aa451867e9540226a65 328 Pfam PF02504 Fatty acid synthesis protein 3 315 2.5E-112 T 10-11-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 CJM129_RS01565 a85231afc92e5aa451867e9540226a65 328 PANTHER PTHR30100 1 323 4.4E-118 T 10-11-2016 CJM129_RS01565 a85231afc92e5aa451867e9540226a65 328 Gene3D G3DSA:3.40.718.10 1 325 1.9E-125 T 10-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CJM129_RS00450 0a89947f1f2cc860e641756671259b94 445 PANTHER PTHR36106 4 445 8.5E-191 T 10-11-2016 CJM129_RS00450 0a89947f1f2cc860e641756671259b94 445 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 8 370 1.3E-133 T 10-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CJM129_RS00450 0a89947f1f2cc860e641756671259b94 445 PANTHER PTHR36106:SF2 4 445 8.5E-191 T 10-11-2016 CJM129_RS00450 0a89947f1f2cc860e641756671259b94 445 PIRSF PIRSF004539 3 445 1.7E-175 T 10-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CJM129_RS00450 0a89947f1f2cc860e641756671259b94 445 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 8 444 2.6E-178 T 10-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CJM129_RS04860 c9f7811f8d49feaac0f5e6e5faff9d52 293 Gene3D G3DSA:3.40.190.10 90 192 2.1E-17 T 10-11-2016 CJM129_RS04860 c9f7811f8d49feaac0f5e6e5faff9d52 293 PANTHER PTHR30126 1 287 2.2E-57 T 10-11-2016 CJM129_RS04860 c9f7811f8d49feaac0f5e6e5faff9d52 293 PANTHER PTHR30126:SF11 1 287 2.2E-57 T 10-11-2016 CJM129_RS04860 c9f7811f8d49feaac0f5e6e5faff9d52 293 Gene3D G3DSA:3.40.190.10 193 268 5.8E-8 T 10-11-2016 CJM129_RS04860 c9f7811f8d49feaac0f5e6e5faff9d52 293 SUPERFAMILY SSF53850 90 291 1.69E-22 T 10-11-2016 CJM129_RS04860 c9f7811f8d49feaac0f5e6e5faff9d52 293 SUPERFAMILY SSF46785 1 81 2.88E-11 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS04860 c9f7811f8d49feaac0f5e6e5faff9d52 293 Gene3D G3DSA:1.10.10.10 1 84 4.1E-13 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS04860 c9f7811f8d49feaac0f5e6e5faff9d52 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.1E-9 T 10-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJM129_RS04860 c9f7811f8d49feaac0f5e6e5faff9d52 293 Pfam PF03466 LysR substrate binding domain 90 287 1.6E-25 T 10-11-2016 IPR005119 LysR, substrate-binding CJM129_RS00355 763bc3ec5f8fbbc9c92f7bfa2f20f85e 298 PANTHER PTHR33209 51 288 3.6E-48 T 10-11-2016 CJM129_RS00355 763bc3ec5f8fbbc9c92f7bfa2f20f85e 298 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 50 251 1.3E-61 T 10-11-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CJM129_RS00355 763bc3ec5f8fbbc9c92f7bfa2f20f85e 298 Gene3D G3DSA:3.90.226.10 25 142 1.2E-43 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS00355 763bc3ec5f8fbbc9c92f7bfa2f20f85e 298 Gene3D G3DSA:3.90.226.10 180 260 1.2E-43 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS00355 763bc3ec5f8fbbc9c92f7bfa2f20f85e 298 Pfam PF01343 Peptidase family S49 102 253 7.9E-53 T 10-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CJM129_RS00355 763bc3ec5f8fbbc9c92f7bfa2f20f85e 298 SUPERFAMILY SSF52096 26 150 2.92E-35 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS00355 763bc3ec5f8fbbc9c92f7bfa2f20f85e 298 SUPERFAMILY SSF52096 179 239 2.92E-35 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 PRINTS PR00906 SecA protein signature 370 387 1.1E-65 T 10-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 PRINTS PR00906 SecA protein signature 118 128 1.1E-65 T 10-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 PRINTS PR00906 SecA protein signature 172 192 1.1E-65 T 10-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 PRINTS PR00906 SecA protein signature 407 420 1.1E-65 T 10-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 PRINTS PR00906 SecA protein signature 333 355 1.1E-65 T 10-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 PRINTS PR00906 SecA protein signature 64 88 1.1E-65 T 10-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 PRINTS PR00906 SecA protein signature 102 116 1.1E-65 T 10-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Pfam PF00271 Helicase conserved C-terminal domain 427 544 1.3E-5 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 PANTHER PTHR30612 8 856 0.0 T 10-11-2016 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Gene3D G3DSA:3.90.1440.10 235 362 2.2E-44 T 10-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Gene3D G3DSA:3.40.50.300 411 584 4.8E-80 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 SUPERFAMILY SSF52540 362 409 3.44E-81 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 SUPERFAMILY SSF52540 4 230 3.44E-81 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 793 19.636 T 10-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 SUPERFAMILY SSF81767 229 362 2.62E-42 T 10-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 SMART SM00957 6 396 2.3E-276 T 10-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Gene3D G3DSA:3.40.50.300 2 230 2.3E-121 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Gene3D G3DSA:3.40.50.300 363 409 2.3E-121 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 SUPERFAMILY SSF81886 585 801 7.46E-67 T 10-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 SUPERFAMILY SSF81886 831 843 7.46E-67 T 10-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Pfam PF07516 SecA Wing and Scaffold domain 583 791 7.6E-58 T 10-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 SMART SM00958 230 352 2.1E-65 T 10-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Pfam PF01043 SecA preprotein cross-linking domain 237 352 2.3E-36 T 10-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Pfam PF07517 SecA DEAD-like domain 7 396 5.0E-129 T 10-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 SUPERFAMILY SSF52540 411 583 1.08E-52 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Gene3D G3DSA:1.10.3060.10 613 791 8.1E-46 T 10-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 511 4.1E-229 T 10-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJM129_RS04570 f7656475e3fdcc43486455e12fb65b3c 862 Pfam PF02810 SEC-C motif 835 853 1.3E-9 T 10-11-2016 IPR004027 SEC-C motif CJM129_RS05585 ecd1d8678bf8f64e686a4d176936233e 91 Pfam PF00881 Nitroreductase family 7 83 5.7E-13 T 10-11-2016 IPR029479 Nitroreductase CJM129_RS05585 ecd1d8678bf8f64e686a4d176936233e 91 PANTHER PTHR23026 1 84 7.8E-14 T 10-11-2016 CJM129_RS05585 ecd1d8678bf8f64e686a4d176936233e 91 SUPERFAMILY SSF55469 1 86 1.96E-24 T 10-11-2016 IPR000415 Nitroreductase-like GO:0016491 CJM129_RS05585 ecd1d8678bf8f64e686a4d176936233e 91 Gene3D G3DSA:3.40.109.10 1 88 1.1E-29 T 10-11-2016 IPR000415 Nitroreductase-like GO:0016491 CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 PANTHER PTHR21087:SF0 1 159 1.9E-42 T 10-11-2016 CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 Pfam PF01202 Shikimate kinase 12 163 1.7E-33 T 10-11-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 PANTHER PTHR21087 1 159 1.9E-42 T 10-11-2016 CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 Gene3D G3DSA:3.40.50.300 2 164 9.4E-54 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 SUPERFAMILY SSF52540 4 163 3.93E-26 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 Hamap MF_00109 Shikimate kinase [aroK]. 3 164 23.339 T 10-11-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 PRINTS PR01100 Shikimate kinase family signature 6 21 3.7E-19 T 10-11-2016 CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 PRINTS PR01100 Shikimate kinase family signature 30 43 3.7E-19 T 10-11-2016 CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 PRINTS PR01100 Shikimate kinase family signature 76 85 3.7E-19 T 10-11-2016 CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 PRINTS PR01100 Shikimate kinase family signature 93 110 3.7E-19 T 10-11-2016 CJM129_RS01850 46e99f25c9d96000811eaa90dbbe07d1 164 PRINTS PR01100 Shikimate kinase family signature 58 66 3.7E-19 T 10-11-2016 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 SUPERFAMILY SSF55973 2 115 2.0E-32 T 10-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 PANTHER PTHR11964:SF1 2 393 3.7E-139 T 10-11-2016 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 249 387 9.1E-49 T 10-11-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 3 397 1.5E-112 T 10-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 2 107 4.7E-30 T 10-11-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 PIRSF PIRSF000497 1 398 2.5E-142 T 10-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 121 131 - T 10-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 Pfam PF02772 S-adenosylmethionine synthetase, central domain 120 242 3.8E-30 T 10-11-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 Gene3D G3DSA:3.30.300.10 269 397 1.6E-51 T 10-11-2016 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 SUPERFAMILY SSF55973 249 396 7.85E-50 T 10-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 SUPERFAMILY SSF55973 118 243 1.02E-31 T 10-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 PANTHER PTHR11964 2 393 3.7E-139 T 10-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 Gene3D G3DSA:3.30.300.10 142 234 1.0E-23 T 10-11-2016 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 Gene3D G3DSA:3.30.300.10 235 268 2.1E-11 T 10-11-2016 CJM129_RS05745 e338a8541efb7e18a6dbd6cf02e5ef49 398 Gene3D G3DSA:3.30.300.10 9 141 1.9E-30 T 10-11-2016 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 Pfam PF01706 FliG C-terminal domain 228 331 6.5E-35 T 10-11-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PANTHER PTHR30534:SF0 2 341 1.6E-79 T 10-11-2016 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PANTHER PTHR30534 2 341 1.6E-79 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 Gene3D G3DSA:1.10.220.30 18 81 1.7E-13 T 10-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 SUPERFAMILY SSF48029 17 111 7.59E-19 T 10-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 12 341 9.6E-121 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 Pfam PF14841 FliG middle domain 126 199 1.8E-27 T 10-11-2016 IPR032779 Flagellar motor switch protein FliG, middle domain CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 282 308 9.1E-56 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 236 256 9.1E-56 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 44 70 9.1E-56 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 205 230 9.1E-56 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 258 278 9.1E-56 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 15 31 9.1E-56 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 125 148 9.1E-56 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 PIRSF PIRSF003161 9 342 1.7E-113 T 10-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 Pfam PF14842 FliG N-terminal domain 15 115 4.0E-29 T 10-11-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 SUPERFAMILY SSF48029 126 332 7.19E-58 T 10-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 Gene3D G3DSA:1.10.220.30 83 198 3.3E-29 T 10-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJM129_RS01515 1250b4da42c2d3fa40d0dd3dfb51cc80 342 Gene3D G3DSA:1.10.220.30 205 339 8.7E-35 T 10-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJM129_RS01555 3068fe8a560baee201ba8293d64b9a56 116 Pfam PF01042 Endoribonuclease L-PSP 6 109 3.0E-20 T 10-11-2016 IPR006175 YjgF/YER057c/UK114 family CJM129_RS01555 3068fe8a560baee201ba8293d64b9a56 116 Gene3D G3DSA:3.30.1330.40 6 110 8.0E-25 T 10-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJM129_RS01555 3068fe8a560baee201ba8293d64b9a56 116 PANTHER PTHR11803 10 109 9.0E-26 T 10-11-2016 IPR006175 YjgF/YER057c/UK114 family CJM129_RS01555 3068fe8a560baee201ba8293d64b9a56 116 SUPERFAMILY SSF55298 3 110 1.18E-26 T 10-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJM129_RS02925 c77d4a58f87584740f048578943b1ad4 293 PANTHER PTHR34383 30 247 2.8E-124 T 10-11-2016 CJM129_RS02925 c77d4a58f87584740f048578943b1ad4 293 SUPERFAMILY SSF52540 57 244 1.74E-30 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02925 c77d4a58f87584740f048578943b1ad4 293 Gene3D G3DSA:3.40.50.300 20 270 6.6E-100 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02925 c77d4a58f87584740f048578943b1ad4 293 PIRSF PIRSF028756 1 280 1.2E-111 T 10-11-2016 IPR016898 Polyphosphate kinase 2 CJM129_RS02925 c77d4a58f87584740f048578943b1ad4 293 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 27 251 1.1E-99 T 10-11-2016 IPR022488 Polyphosphate kinase-2-related CJM129_RS02925 c77d4a58f87584740f048578943b1ad4 293 PANTHER PTHR34383:SF1 30 247 2.8E-124 T 10-11-2016 CJM129_RS02925 c77d4a58f87584740f048578943b1ad4 293 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 27 252 9.4E-109 T 10-11-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 CJM129_RS07050 9feeaca36bb59ced8d9d549ae45b2f79 232 Pfam PF02348 Cytidylyltransferase 5 182 2.7E-35 T 10-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CJM129_RS07050 9feeaca36bb59ced8d9d549ae45b2f79 232 Gene3D G3DSA:3.90.550.10 1 225 2.1E-67 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07050 9feeaca36bb59ced8d9d549ae45b2f79 232 PANTHER PTHR21485 1 226 1.3E-39 T 10-11-2016 CJM129_RS07050 9feeaca36bb59ced8d9d549ae45b2f79 232 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 4 225 1.2E-105 T 10-11-2016 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 CJM129_RS07050 9feeaca36bb59ced8d9d549ae45b2f79 232 SUPERFAMILY SSF53448 1 225 1.43E-56 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07050 9feeaca36bb59ced8d9d549ae45b2f79 232 PANTHER PTHR21485:SF20 1 226 1.3E-39 T 10-11-2016 CJM129_RS02385 639bae673dc48b7aa7351a13f6d7552a 124 PANTHER PTHR35866:SF1 15 104 3.2E-15 T 10-11-2016 CJM129_RS02385 639bae673dc48b7aa7351a13f6d7552a 124 Pfam PF03692 Putative zinc- or iron-chelating domain 15 115 6.4E-14 T 10-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein CJM129_RS02385 639bae673dc48b7aa7351a13f6d7552a 124 PANTHER PTHR35866 15 104 3.2E-15 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 10-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Pfam PF00679 Elongation factor G C-terminus 598 684 2.8E-34 T 10-11-2016 IPR000640 Translation elongation factor EFG, V domain CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Pfam PF03144 Elongation factor Tu domain 2 322 389 4.4E-13 T 10-11-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PANTHER PTHR23115:SF66 254 282 0.0 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PANTHER PTHR23115:SF66 301 689 0.0 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PANTHER PTHR23115:SF66 2 177 0.0 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 SUPERFAMILY SSF52540 6 280 1.15E-109 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PANTHER PTHR23115 301 689 0.0 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PANTHER PTHR23115 2 177 0.0 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 SUPERFAMILY SSF50447 264 402 5.71E-34 T 10-11-2016 IPR009000 Translation protein, beta-barrel domain CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 SUPERFAMILY SSF54980 601 688 9.59E-33 T 10-11-2016 IPR009022 Elongation factor G, III-V domain CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.6E-16 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-16 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.6E-16 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.6E-16 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.6E-16 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Pfam PF14492 Elongation Factor G, domain II 402 476 1.5E-35 T 10-11-2016 IPR009022 Elongation factor G, III-V domain CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Gene3D G3DSA:2.40.30.10 304 402 6.2E-35 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Pfam PF00009 Elongation factor Tu GTP binding domain 8 280 3.0E-69 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 SUPERFAMILY SSF54211 477 596 1.69E-48 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 PANTHER PTHR23115 254 282 0.0 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 179 1.2E-31 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 10-11-2016 IPR031157 Tr-type G domain, conserved site CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Pfam PF03764 Elongation factor G, domain IV 477 595 8.1E-51 T 10-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Gene3D G3DSA:3.30.230.10 482 600 2.4E-54 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 SMART SM00838 598 685 4.2E-62 T 10-11-2016 IPR000640 Translation elongation factor EFG, V domain CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 SUPERFAMILY SSF54980 402 479 1.65E-25 T 10-11-2016 IPR009022 Elongation factor G, III-V domain CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Gene3D G3DSA:3.30.70.870 403 478 1.2E-39 T 10-11-2016 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 SMART SM00889 478 596 2.9E-79 T 10-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Gene3D G3DSA:3.30.70.240 601 688 3.5E-36 T 10-11-2016 IPR000640 Translation elongation factor EFG, V domain CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Gene3D G3DSA:3.40.50.300 6 285 1.1E-107 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02365 c96d95097a7768bc5f440e1a13ada268 691 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 112.835 T 10-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 CJM129_RS07265 2bbf7d1f8b51f975c50950d34d6da020 330 Gene3D G3DSA:3.40.50.1980 56 178 2.9E-28 T 10-11-2016 CJM129_RS07265 2bbf7d1f8b51f975c50950d34d6da020 330 PANTHER PTHR30532:SF4 1 329 5.4E-89 T 10-11-2016 CJM129_RS07265 2bbf7d1f8b51f975c50950d34d6da020 330 PANTHER PTHR30532 1 329 5.4E-89 T 10-11-2016 CJM129_RS07265 2bbf7d1f8b51f975c50950d34d6da020 330 SUPERFAMILY SSF53807 55 316 3.92E-68 T 10-11-2016 CJM129_RS07265 2bbf7d1f8b51f975c50950d34d6da020 330 Gene3D G3DSA:3.40.50.1980 180 329 1.7E-32 T 10-11-2016 CJM129_RS07265 2bbf7d1f8b51f975c50950d34d6da020 330 Pfam PF01497 Periplasmic binding protein 73 305 4.9E-46 T 10-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CJM129_RS07870 eec41db0eacc747abdda6941424de5bd 129 Pfam PF00380 Ribosomal protein S9/S16 8 129 1.2E-42 T 10-11-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CJM129_RS07870 eec41db0eacc747abdda6941424de5bd 129 PANTHER PTHR21569 5 129 5.9E-56 T 10-11-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CJM129_RS07870 eec41db0eacc747abdda6941424de5bd 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 29.388 T 10-11-2016 IPR023035 Ribosomal protein S9, bacterial/plastid CJM129_RS07870 eec41db0eacc747abdda6941424de5bd 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 10-11-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CJM129_RS07870 eec41db0eacc747abdda6941424de5bd 129 SUPERFAMILY SSF54211 4 129 5.31E-43 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS07870 eec41db0eacc747abdda6941424de5bd 129 Gene3D G3DSA:3.30.230.10 4 129 2.7E-46 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 Pfam PF01565 FAD binding domain 40 177 3.9E-26 T 10-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 537 548 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 PANTHER PTHR11748 3 180 4.7E-172 T 10-11-2016 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 PANTHER PTHR11748:SF65 219 559 4.7E-172 T 10-11-2016 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 SUPERFAMILY SSF55103 268 518 1.96E-43 T 10-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 Gene3D G3DSA:3.30.465.10 215 261 3.5E-14 T 10-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 Gene3D G3DSA:3.30.465.10 95 182 3.5E-14 T 10-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 Gene3D G3DSA:3.30.43.10 3 82 4.6E-15 T 10-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 SUPERFAMILY SSF56176 14 261 4.67E-44 T 10-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 PANTHER PTHR11748 219 559 4.7E-172 T 10-11-2016 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 SUPERFAMILY SSF46548 495 621 1.74E-14 T 10-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 PANTHER PTHR11748:SF65 3 180 4.7E-172 T 10-11-2016 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 Pfam PF12838 4Fe-4S dicluster domain 536 609 2.0E-7 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 Gene3D G3DSA:1.10.1060.10 491 622 9.6E-17 T 10-11-2016 CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 596 607 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS08385 f0f703bf8def382e07c4b49165005a3d 923 Pfam PF02913 FAD linked oxidases, C-terminal domain 268 510 2.4E-39 T 10-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 1.8E-98 T 10-11-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PANTHER PTHR24322 155 187 1.1E-44 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PANTHER PTHR24322 10 139 1.1E-44 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 Gene3D G3DSA:3.40.50.720 2 247 7.8E-81 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 9.9E-5 T 10-11-2016 CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 6.6E-42 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.6E-42 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.6E-42 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.6E-42 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 6.6E-42 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 6.6E-42 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 SUPERFAMILY SSF51735 5 247 2.16E-78 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PANTHER PTHR24322:SF328 10 139 1.1E-44 T 10-11-2016 CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 9.2E-61 T 10-11-2016 CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.8E-12 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.8E-12 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.8E-12 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 10-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJM129_RS02115 c3290e62ee33ac2db0216715e05f7acb 247 PANTHER PTHR24322:SF328 155 187 1.1E-44 T 10-11-2016 CJM129_RS00705 d1e0fe26953549436b31af5ef9272fe0 790 Pfam PF07728 AAA domain (dynein-related subfamily) 558 642 7.3E-10 T 10-11-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CJM129_RS00705 d1e0fe26953549436b31af5ef9272fe0 790 PANTHER PTHR37291:SF1 72 781 9.0E-70 T 10-11-2016 CJM129_RS00705 d1e0fe26953549436b31af5ef9272fe0 790 PANTHER PTHR37291 72 781 9.0E-70 T 10-11-2016 CJM129_RS00705 d1e0fe26953549436b31af5ef9272fe0 790 SUPERFAMILY SSF52540 541 680 1.08E-9 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00705 d1e0fe26953549436b31af5ef9272fe0 790 SUPERFAMILY SSF52540 322 361 1.08E-9 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00705 d1e0fe26953549436b31af5ef9272fe0 790 Gene3D G3DSA:3.40.50.300 564 647 2.1E-13 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00705 d1e0fe26953549436b31af5ef9272fe0 790 Gene3D G3DSA:3.40.50.300 324 364 2.1E-13 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00705 d1e0fe26953549436b31af5ef9272fe0 790 Gene3D G3DSA:3.40.50.300 398 417 2.1E-13 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 SUPERFAMILY SSF50677 222 419 1.16E-45 T 10-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 Gene3D G3DSA:3.90.740.10 222 424 5.6E-50 T 10-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PANTHER PTHR11946 291 808 0.0 T 10-11-2016 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PANTHER PTHR11946 1 204 0.0 T 10-11-2016 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 809 0.0 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PANTHER PTHR11946 245 270 0.0 T 10-11-2016 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 SUPERFAMILY SSF52374 2 225 3.34E-141 T 10-11-2016 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 SUPERFAMILY SSF52374 416 628 3.34E-141 T 10-11-2016 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 403 7.8E-61 T 10-11-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 618 9.8E-26 T 10-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 Gene3D G3DSA:3.40.50.620 2 221 1.3E-144 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 Gene3D G3DSA:3.40.50.620 425 607 1.3E-144 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 Pfam PF09334 tRNA synthetases class I (M) 34 180 2.6E-23 T 10-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 SUPERFAMILY SSF47323 623 808 3.27E-18 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 10-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PANTHER PTHR11946:SF7 1 204 0.0 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PANTHER PTHR11946:SF7 291 808 0.0 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 2.9E-42 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 2.9E-42 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 487 505 2.9E-42 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 2.9E-42 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 571 2.9E-42 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 2.9E-42 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 2.9E-42 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 Gene3D G3DSA:1.10.730.10 608 732 7.3E-24 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 808 21.338 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS05720 a66a380fca3222236e32448f38ac9ebb 809 PANTHER PTHR11946:SF7 245 270 0.0 T 10-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 CJM129_RS02985 c2c24d33084ba4ccc38a0811eec2ca2d 246 Pfam PF00005 ABC transporter 20 171 9.5E-35 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS02985 c2c24d33084ba4ccc38a0811eec2ca2d 246 SMART SM00382 27 222 4.3E-12 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS02985 c2c24d33084ba4ccc38a0811eec2ca2d 246 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS02985 c2c24d33084ba4ccc38a0811eec2ca2d 246 PANTHER PTHR24220 4 243 7.6E-111 T 10-11-2016 CJM129_RS02985 c2c24d33084ba4ccc38a0811eec2ca2d 246 Gene3D G3DSA:3.40.50.300 5 241 5.6E-68 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02985 c2c24d33084ba4ccc38a0811eec2ca2d 246 SUPERFAMILY SSF52540 5 233 1.33E-57 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02985 c2c24d33084ba4ccc38a0811eec2ca2d 246 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 246 1.8E-106 T 10-11-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CJM129_RS02985 c2c24d33084ba4ccc38a0811eec2ca2d 246 PANTHER PTHR24220:SF585 4 243 7.6E-111 T 10-11-2016 CJM129_RS00615 37fe0312a673fd16816043bfa2eb7b92 135 Gene3D G3DSA:3.40.390.30 21 134 2.2E-39 T 10-11-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CJM129_RS00615 37fe0312a673fd16816043bfa2eb7b92 135 Pfam PF02130 Uncharacterized protein family UPF0054 18 121 3.2E-34 T 10-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CJM129_RS00615 37fe0312a673fd16816043bfa2eb7b92 135 PANTHER PTHR22881 22 125 1.5E-26 T 10-11-2016 CJM129_RS00615 37fe0312a673fd16816043bfa2eb7b92 135 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 94 104 - T 10-11-2016 IPR020549 Endoribonuclease YbeY, conserved site CJM129_RS00615 37fe0312a673fd16816043bfa2eb7b92 135 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 22 122 3.2E-32 T 10-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CJM129_RS00615 37fe0312a673fd16816043bfa2eb7b92 135 SUPERFAMILY SSF55486 21 132 3.02E-33 T 10-11-2016 CJM129_RS00615 37fe0312a673fd16816043bfa2eb7b92 135 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 126 20.12 T 10-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 Gene3D G3DSA:3.90.1380.10 1 77 4.2E-10 T 10-11-2016 IPR029144 Threonine synthase, N-terminal CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 Gene3D G3DSA:3.40.50.1100 116 194 1.6E-4 T 10-11-2016 CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 Pfam PF14821 Threonine synthase N terminus 6 72 1.1E-6 T 10-11-2016 IPR029144 Threonine synthase, N-terminal CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 10-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 PANTHER PTHR10314 25 331 6.9E-81 T 10-11-2016 CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 PANTHER PTHR10314 360 456 6.9E-81 T 10-11-2016 CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 PANTHER PTHR10314:SF1 360 456 6.9E-81 T 10-11-2016 CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 Gene3D G3DSA:3.40.50.1100 195 423 1.4E-69 T 10-11-2016 CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 PANTHER PTHR10314:SF1 25 331 6.9E-81 T 10-11-2016 CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 81 312 6.0E-10 T 10-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 TIGRFAM TIGR00260 thrC: threonine synthase 64 415 5.2E-76 T 10-11-2016 IPR004450 Threonine synthase-like CJM129_RS03940 b6321f6e3a7701557a0e6d20ad7fb2e4 470 SUPERFAMILY SSF53686 1 468 3.24E-119 T 10-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 Gene3D G3DSA:3.40.50.970 2 191 1.4E-74 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 273 366 1.8E-22 T 10-11-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 PANTHER PTHR32154 213 374 1.8E-109 T 10-11-2016 CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 PANTHER PTHR32154 1 184 1.8E-109 T 10-11-2016 CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 PANTHER PTHR32154:SF14 1 184 1.8E-109 T 10-11-2016 CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 242 6.0E-65 T 10-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 SUPERFAMILY SSF52518 2 256 1.33E-66 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 Gene3D G3DSA:3.40.50.920 265 372 3.3E-24 T 10-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 SUPERFAMILY SSF52922 265 372 2.88E-26 T 10-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJM129_RS02565 11a1c480f586af28c2d7925d7bc2d121 374 PANTHER PTHR32154:SF14 213 374 1.8E-109 T 10-11-2016 CJM129_RS06635 96f08779f8406b177039773901bfae6f 221 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS06635 96f08779f8406b177039773901bfae6f 221 Pfam PF00005 ABC transporter 20 166 3.2E-31 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS06635 96f08779f8406b177039773901bfae6f 221 PANTHER PTHR24220 18 219 7.8E-66 T 10-11-2016 CJM129_RS06635 96f08779f8406b177039773901bfae6f 221 SMART SM00382 28 218 7.7E-13 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS06635 96f08779f8406b177039773901bfae6f 221 PANTHER PTHR24220:SF470 18 219 7.8E-66 T 10-11-2016 CJM129_RS06635 96f08779f8406b177039773901bfae6f 221 Gene3D G3DSA:3.40.50.300 4 217 1.8E-55 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06635 96f08779f8406b177039773901bfae6f 221 SUPERFAMILY SSF52540 4 219 6.81E-56 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06420 87a9b2b11e51af6b9e67ef764b1cd611 206 PANTHER PTHR18901 4 176 1.4E-29 T 10-11-2016 CJM129_RS06420 87a9b2b11e51af6b9e67ef764b1cd611 206 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 77 174 4.9E-7 T 10-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CJM129_RS06420 87a9b2b11e51af6b9e67ef764b1cd611 206 Gene3D G3DSA:3.40.50.1000 84 186 1.4E-27 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06420 87a9b2b11e51af6b9e67ef764b1cd611 206 Gene3D G3DSA:3.40.50.1000 3 13 1.4E-27 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06420 87a9b2b11e51af6b9e67ef764b1cd611 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 177 2.6E-31 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06420 87a9b2b11e51af6b9e67ef764b1cd611 206 SUPERFAMILY SSF56784 4 183 6.78E-41 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 1.2E-55 T 10-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 329 7.0E-43 T 10-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 SUPERFAMILY SSF52518 3 174 2.4E-60 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 Gene3D G3DSA:3.40.50.970 360 561 4.4E-69 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 Gene3D G3DSA:3.40.50.970 2 173 6.0E-69 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 PANTHER PTHR18968:SF116 3 561 6.4E-280 T 10-11-2016 CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 SUPERFAMILY SSF52467 186 357 1.43E-59 T 10-11-2016 IPR029035 DHS-like NAD/FAD-binding domain CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 PANTHER PTHR18968 3 561 6.4E-280 T 10-11-2016 CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 536 5.3E-47 T 10-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 559 8.5E-228 T 10-11-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 Gene3D G3DSA:3.40.50.1220 188 359 1.8E-60 T 10-11-2016 IPR029035 DHS-like NAD/FAD-binding domain CJM129_RS02775 09c1239f9791cd57406b808e85bae82d 566 SUPERFAMILY SSF52518 363 561 2.4E-63 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS01925 a0cf6ba18280d360fe8f4f1857851def 414 SUPERFAMILY SSF53383 3 410 1.51E-175 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS01925 a0cf6ba18280d360fe8f4f1857851def 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 2 410 50.45 T 10-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CJM129_RS01925 a0cf6ba18280d360fe8f4f1857851def 414 Gene3D G3DSA:3.90.1150.10 279 410 1.8E-47 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS01925 a0cf6ba18280d360fe8f4f1857851def 414 Pfam PF00464 Serine hydroxymethyltransferase 3 379 1.1E-182 T 10-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CJM129_RS01925 a0cf6ba18280d360fe8f4f1857851def 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 216 232 - T 10-11-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CJM129_RS01925 a0cf6ba18280d360fe8f4f1857851def 414 Gene3D G3DSA:3.40.640.10 32 278 1.9E-103 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS01925 a0cf6ba18280d360fe8f4f1857851def 414 PIRSF PIRSF000412 1 413 7.8E-162 T 10-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CJM129_RS01925 a0cf6ba18280d360fe8f4f1857851def 414 PANTHER PTHR11680 2 413 1.3E-237 T 10-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 CJM129_RS08755 916f01d4d67a2aec7d1ea7913a1dce59 382 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 10 378 1.4E-129 T 10-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJM129_RS08755 916f01d4d67a2aec7d1ea7913a1dce59 382 PANTHER PTHR30341:SF0 1 381 7.0E-141 T 10-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJM129_RS08755 916f01d4d67a2aec7d1ea7913a1dce59 382 Gene3D G3DSA:1.20.1530.10 2 381 5.0E-144 T 10-11-2016 IPR023171 Na/H antiporter domain CJM129_RS08755 916f01d4d67a2aec7d1ea7913a1dce59 382 Pfam PF06965 Na+/H+ antiporter 1 6 378 3.2E-139 T 10-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJM129_RS08755 916f01d4d67a2aec7d1ea7913a1dce59 382 PANTHER PTHR30341 1 381 7.0E-141 T 10-11-2016 CJM129_RS08755 916f01d4d67a2aec7d1ea7913a1dce59 382 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 382 21.866 T 10-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJM129_RS01180 a344c1c8f06c455db7b3dafab84f005a 63 SUPERFAMILY SSF143034 2 62 1.29E-17 T 10-11-2016 CJM129_RS01180 a344c1c8f06c455db7b3dafab84f005a 63 PRINTS PR00064 Ribosomal protein L35 signature 3 20 9.3E-11 T 10-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJM129_RS01180 a344c1c8f06c455db7b3dafab84f005a 63 PRINTS PR00064 Ribosomal protein L35 signature 20 34 9.3E-11 T 10-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJM129_RS01180 a344c1c8f06c455db7b3dafab84f005a 63 PRINTS PR00064 Ribosomal protein L35 signature 35 53 9.3E-11 T 10-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJM129_RS01180 a344c1c8f06c455db7b3dafab84f005a 63 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.152 T 10-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJM129_RS01180 a344c1c8f06c455db7b3dafab84f005a 63 Pfam PF01632 Ribosomal protein L35 2 61 5.9E-20 T 10-11-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS01180 a344c1c8f06c455db7b3dafab84f005a 63 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 61 4.9E-20 T 10-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJM129_RS01180 a344c1c8f06c455db7b3dafab84f005a 63 PANTHER PTHR33343 1 61 2.8E-15 T 10-11-2016 CJM129_RS01180 a344c1c8f06c455db7b3dafab84f005a 63 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 10-11-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS04400 ff10ed9e36486ac04a35dbf0b328a1e7 98 SMART SM00411 1 90 6.6E-42 T 10-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CJM129_RS04400 ff10ed9e36486ac04a35dbf0b328a1e7 98 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.8E-13 T 10-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CJM129_RS04400 ff10ed9e36486ac04a35dbf0b328a1e7 98 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.8E-13 T 10-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CJM129_RS04400 ff10ed9e36486ac04a35dbf0b328a1e7 98 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.8E-13 T 10-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CJM129_RS04400 ff10ed9e36486ac04a35dbf0b328a1e7 98 Pfam PF00216 Bacterial DNA-binding protein 1 89 5.2E-30 T 10-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 CJM129_RS04400 ff10ed9e36486ac04a35dbf0b328a1e7 98 PANTHER PTHR33175 1 89 4.0E-33 T 10-11-2016 CJM129_RS04400 ff10ed9e36486ac04a35dbf0b328a1e7 98 Gene3D G3DSA:4.10.520.10 1 91 4.8E-32 T 10-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJM129_RS04400 ff10ed9e36486ac04a35dbf0b328a1e7 98 SUPERFAMILY SSF47729 1 91 3.09E-28 T 10-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJM129_RS04310 9c544d84742654de5b9054a7b432e0f6 277 Pfam PF02401 LytB protein 3 272 6.3E-87 T 10-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CJM129_RS04310 9c544d84742654de5b9054a7b432e0f6 277 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 275 30.864 T 10-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CJM129_RS04310 9c544d84742654de5b9054a7b432e0f6 277 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 273 4.6E-105 T 10-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 CJM129_RS04310 9c544d84742654de5b9054a7b432e0f6 277 PANTHER PTHR30426 1 274 3.7E-96 T 10-11-2016 CJM129_RS06910 12205e8e535916b3438eba84b881b9e1 113 SMART SM00507 55 104 8.9E-7 T 10-11-2016 IPR003615 HNH nuclease CJM129_RS06910 12205e8e535916b3438eba84b881b9e1 113 Pfam PF01844 HNH endonuclease 67 108 2.0E-13 T 10-11-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 Gene3D G3DSA:3.30.70.360 180 296 4.6E-37 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 SUPERFAMILY SSF53187 297 382 2.66E-82 T 10-11-2016 CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 SUPERFAMILY SSF53187 3 196 2.66E-82 T 10-11-2016 CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 PANTHER PTHR11014:SF63 16 383 6.0E-131 T 10-11-2016 CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 368 2.4E-101 T 10-11-2016 IPR017439 Amidohydrolase GO:0016787 CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 Pfam PF01546 Peptidase family M20/M25/M40 73 379 1.6E-31 T 10-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 PIRSF PIRSF005962 2 383 2.3E-124 T 10-11-2016 IPR017439 Amidohydrolase GO:0016787 CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 Pfam PF07687 Peptidase dimerisation domain 184 279 1.5E-12 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 SUPERFAMILY SSF55031 182 291 9.55E-30 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 Gene3D G3DSA:3.40.630.10 6 177 5.2E-90 T 10-11-2016 CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 Gene3D G3DSA:3.40.630.10 297 383 5.2E-90 T 10-11-2016 CJM129_RS04790 78455143b65a81b5dd644b5c4c29c8fd 383 PANTHER PTHR11014 16 383 6.0E-131 T 10-11-2016 CJM129_RS08605 9cb13c09416aa4bc699f7dc06f048d7c 416 PANTHER PTHR35334 5 416 9.9E-164 T 10-11-2016 CJM129_RS08605 9cb13c09416aa4bc699f7dc06f048d7c 416 PANTHER PTHR35334:SF2 5 416 9.9E-164 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Pfam PF10385 RNA polymerase beta subunit external 1 domain 603 666 1.7E-20 T 10-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 PANTHER PTHR20856 1059 1154 0.0 T 10-11-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 PANTHER PTHR20856 338 938 0.0 T 10-11-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 PANTHER PTHR20856 8 230 0.0 T 10-11-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 PANTHER PTHR20856:SF20 1059 1154 0.0 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 PANTHER PTHR20856:SF20 1210 1374 0.0 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:2.40.270.10 1086 1270 6.8E-81 T 10-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:2.40.270.10 801 828 6.8E-81 T 10-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 12 1370 11.59 T 10-11-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:2.40.50.150 1071 1085 3.3E-47 T 10-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:2.40.50.150 836 945 3.3E-47 T 10-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1089 1101 - T 10-11-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Pfam PF04565 RNA polymerase Rpb2, domain 3 525 593 2.9E-30 T 10-11-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:3.90.1100.10 671 724 2.6E-132 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:3.90.1100.10 19 152 2.6E-132 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:3.90.1100.10 454 603 2.6E-132 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:2.30.150.10 604 667 1.4E-22 T 10-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 SUPERFAMILY SSF64484 367 947 0.0 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 SUPERFAMILY SSF64484 1065 1373 0.0 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 SUPERFAMILY SSF64484 11 226 0.0 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Pfam PF04560 RNA polymerase Rpb2, domain 7 1294 1369 1.9E-24 T 10-11-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:2.40.50.100 727 800 1.4E-24 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 PANTHER PTHR20856 1210 1374 0.0 T 10-11-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Pfam PF00562 RNA polymerase Rpb2, domain 6 730 1291 1.1E-144 T 10-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 PANTHER PTHR20856:SF20 338 938 0.0 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 PANTHER PTHR20856:SF20 8 230 0.0 T 10-11-2016 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Pfam PF04563 RNA polymerase beta subunit 26 511 3.4E-22 T 10-11-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1367 0.0 T 10-11-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:3.90.1110.10 154 230 3.0E-60 T 10-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Gene3D G3DSA:3.90.1110.10 354 453 3.0E-60 T 10-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Pfam PF04561 RNA polymerase Rpb2, domain 2 360 464 4.5E-17 T 10-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02345 b305eeec3f65561ccc3ff85c10d21ead 1375 Pfam PF04561 RNA polymerase Rpb2, domain 2 152 237 3.8E-11 T 10-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS06020 15d4b10508a3c0c97aaefbcaf00ac679 68 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 3 35 3.5E-8 T 10-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type CJM129_RS06020 15d4b10508a3c0c97aaefbcaf00ac679 68 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 3 39 5.7E-12 T 10-11-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type CJM129_RS03990 132ede4a85f15e38e5f958a962cbd5e1 341 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 311 1.5E-36 T 10-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 CJM129_RS03990 132ede4a85f15e38e5f958a962cbd5e1 341 PANTHER PTHR33529 1 310 8.6E-22 T 10-11-2016 CJM129_RS04605 7835370d20607ffa0fc8a30159b15ffa 325 PANTHER PTHR31377:SF0 6 325 1.8E-92 T 10-11-2016 CJM129_RS04605 7835370d20607ffa0fc8a30159b15ffa 325 PANTHER PTHR31377 6 325 1.8E-92 T 10-11-2016 CJM129_RS04605 7835370d20607ffa0fc8a30159b15ffa 325 SUPERFAMILY SSF55909 5 321 3.93E-103 T 10-11-2016 CJM129_RS04605 7835370d20607ffa0fc8a30159b15ffa 325 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 319 2.0E-98 T 10-11-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CJM129_RS04605 7835370d20607ffa0fc8a30159b15ffa 325 Gene3D G3DSA:3.75.10.10 5 319 9.2E-110 T 10-11-2016 CJM129_RS09300 d0bd9856f8b00a08eac48c180e95ecc6 314 Pfam PF01493 GXGXG motif 145 310 3.8E-69 T 10-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CJM129_RS09300 d0bd9856f8b00a08eac48c180e95ecc6 314 PANTHER PTHR11938 1 306 2.6E-150 T 10-11-2016 CJM129_RS09300 d0bd9856f8b00a08eac48c180e95ecc6 314 Gene3D G3DSA:3.20.20.70 1 104 6.5E-35 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS09300 d0bd9856f8b00a08eac48c180e95ecc6 314 SUPERFAMILY SSF69336 121 311 3.4E-68 T 10-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CJM129_RS09300 d0bd9856f8b00a08eac48c180e95ecc6 314 Gene3D G3DSA:2.160.20.60 120 311 9.2E-72 T 10-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CJM129_RS09300 d0bd9856f8b00a08eac48c180e95ecc6 314 PANTHER PTHR11938:SF1 1 306 2.6E-150 T 10-11-2016 CJM129_RS09300 d0bd9856f8b00a08eac48c180e95ecc6 314 Pfam PF01645 Conserved region in glutamate synthase 1 65 1.7E-22 T 10-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CJM129_RS09300 d0bd9856f8b00a08eac48c180e95ecc6 314 SUPERFAMILY SSF51395 1 86 3.78E-26 T 10-11-2016 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 172 28.096 T 10-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 78 9.1E-31 T 10-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 10-11-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 Gene3D G3DSA:3.30.110.10 81 171 5.2E-28 T 10-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 SUPERFAMILY SSF54364 7 80 1.57E-28 T 10-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 171 4.1E-64 T 10-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 Gene3D G3DSA:3.10.20.80 4 80 3.5E-34 T 10-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 170 4.5E-28 T 10-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 PANTHER PTHR10938 3 172 5.2E-54 T 10-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 CJM129_RS01045 86405d8456ddf58663c1722becb61945 172 SUPERFAMILY SSF55200 85 171 6.67E-26 T 10-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 CJM129_RS04430 5c8127eebb2d1c9967079d28e174ccba 219 SUPERFAMILY SSF161098 12 202 2.62E-37 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04430 5c8127eebb2d1c9967079d28e174ccba 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 4.0E-15 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04430 5c8127eebb2d1c9967079d28e174ccba 219 PANTHER PTHR30614 5 219 4.9E-55 T 10-11-2016 CJM129_RS04430 5c8127eebb2d1c9967079d28e174ccba 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 2.0E-21 T 10-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CJM129_RS04430 5c8127eebb2d1c9967079d28e174ccba 219 Gene3D G3DSA:1.10.3720.10 12 215 5.4E-40 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 Gene3D G3DSA:3.40.1060.10 506 668 8.4E-77 T 10-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 Gene3D G3DSA:3.30.499.10 669 844 1.3E-49 T 10-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 ProSitePatterns PS00450 Aconitase family signature 1. 693 710 - T 10-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 SUPERFAMILY SSF53732 366 843 4.58E-138 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 Gene3D G3DSA:3.30.499.10 389 505 4.7E-57 T 10-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 Pfam PF11791 Aconitate B N-terminal domain 6 154 5.7E-59 T 10-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 Pfam PF00330 Aconitase family (aconitate hydratase) 444 808 1.5E-40 T 10-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 PANTHER PTHR11670:SF39 291 844 3.5E-279 T 10-11-2016 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 ProSitePatterns PS01244 Aconitase family signature 2. 751 764 - T 10-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 SUPERFAMILY SSF52016 160 358 1.12E-59 T 10-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 Pfam PF06434 Aconitate hydratase 2 N-terminus 167 368 1.3E-93 T 10-11-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 3 845 0.0 T 10-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 PIRSF PIRSF036687 1 848 0.0 T 10-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 Gene3D G3DSA:3.20.19.10 160 347 2.2E-86 T 10-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 PANTHER PTHR11670 291 844 3.5E-279 T 10-11-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS04035 20ecdc829a9e3508571a848ce396ab1a 848 SUPERFAMILY SSF74778 3 157 3.4E-59 T 10-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 PIRSF PIRSF006092 1 158 3.7E-50 T 10-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 10-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 SUPERFAMILY SSF54534 81 156 1.7E-20 T 10-11-2016 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 10-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 4.4E-28 T 10-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 3.3E-60 T 10-11-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.817 T 10-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 SUPERFAMILY SSF46557 3 78 1.26E-25 T 10-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 4.5E-26 T 10-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 Gene3D G3DSA:3.10.50.30 76 156 9.6E-28 T 10-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 Gene3D G3DSA:1.10.287.180 1 75 2.8E-30 T 10-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CJM129_RS01375 b1c9da2a1f7227de138933fe4fb272aa 161 PANTHER PTHR30437 1 161 6.9E-60 T 10-11-2016 CJM129_RS05540 0c5ab6b3366130dd7ef1296c7865903b 657 Gene3D G3DSA:3.40.720.10 286 567 1.4E-13 T 10-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJM129_RS05540 0c5ab6b3366130dd7ef1296c7865903b 657 SUPERFAMILY SSF53649 285 584 1.02E-18 T 10-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJM129_RS05540 0c5ab6b3366130dd7ef1296c7865903b 657 Pfam PF00884 Sulfatase 281 567 7.9E-15 T 10-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 10-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 Pfam PF00453 Ribosomal protein L20 3 109 1.9E-46 T 10-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 PANTHER PTHR10986 2 117 1.1E-60 T 10-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 72 2.0E-12 T 10-11-2016 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 PANTHER PTHR10986:SF12 2 117 1.1E-60 T 10-11-2016 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.5E-40 T 10-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.5E-40 T 10-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.5E-40 T 10-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 8.4E-50 T 10-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 Gene3D G3DSA:1.10.1900.20 55 117 5.9E-31 T 10-11-2016 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.72 T 10-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 CJM129_RS01185 db0ff823aee8ff705ab91c7e3fa6ede6 117 SUPERFAMILY SSF74731 3 117 4.58E-47 T 10-11-2016 CJM129_RS02460 cf624130066657ba64cbda38bf5a0ce6 236 SUPERFAMILY SSF56104 2 235 7.85E-78 T 10-11-2016 CJM129_RS02460 cf624130066657ba64cbda38bf5a0ce6 236 PANTHER PTHR11609 3 234 1.4E-110 T 10-11-2016 CJM129_RS02460 cf624130066657ba64cbda38bf5a0ce6 236 Pfam PF01259 SAICAR synthetase 6 233 5.2E-62 T 10-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CJM129_RS02460 cf624130066657ba64cbda38bf5a0ce6 236 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 1.1E-70 T 10-11-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CJM129_RS02460 cf624130066657ba64cbda38bf5a0ce6 236 Gene3D G3DSA:3.30.200.20 6 93 1.8E-36 T 10-11-2016 CJM129_RS02460 cf624130066657ba64cbda38bf5a0ce6 236 PANTHER PTHR11609:SF2 3 234 1.4E-110 T 10-11-2016 CJM129_RS02460 cf624130066657ba64cbda38bf5a0ce6 236 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 10-11-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CJM129_RS02460 cf624130066657ba64cbda38bf5a0ce6 236 Gene3D G3DSA:3.30.470.20 94 222 1.5E-48 T 10-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CJM129_RS02460 cf624130066657ba64cbda38bf5a0ce6 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 236 30.701 T 10-11-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 CJM129_RS05070 022594b2380a13137da37dea88356d57 171 PANTHER PTHR34319 1 168 1.0E-54 T 10-11-2016 CJM129_RS05070 022594b2380a13137da37dea88356d57 171 Gene3D G3DSA:2.30.110.20 1 169 4.0E-30 T 10-11-2016 IPR008514 Type VI secretion system effector, Hcp CJM129_RS05070 022594b2380a13137da37dea88356d57 171 SUPERFAMILY SSF141452 3 170 2.88E-37 T 10-11-2016 IPR008514 Type VI secretion system effector, Hcp CJM129_RS05070 022594b2380a13137da37dea88356d57 171 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 3.8E-57 T 10-11-2016 IPR008514 Type VI secretion system effector, Hcp CJM129_RS05070 022594b2380a13137da37dea88356d57 171 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 8.0E-30 T 10-11-2016 IPR008514 Type VI secretion system effector, Hcp CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 Gene3D G3DSA:1.10.150.20 67 139 3.6E-24 T 10-11-2016 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 SUPERFAMILY SSF47781 66 135 1.08E-18 T 10-11-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 SUPERFAMILY SSF46929 141 182 8.63E-6 T 10-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 182 3.1E-42 T 10-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 Gene3D G3DSA:1.10.8.10 140 182 1.5E-7 T 10-11-2016 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 Pfam PF01330 RuvA N terminal domain 1 62 2.8E-9 T 10-11-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 Pfam PF07499 RuvA, C-terminal domain 142 182 3.9E-8 T 10-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 Gene3D G3DSA:2.40.50.140 1 66 1.0E-13 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 SMART SM00278 108 127 0.09 T 10-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 SMART SM00278 73 92 220.0 T 10-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.1E-15 T 10-11-2016 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 PANTHER PTHR33796 2 183 2.9E-40 T 10-11-2016 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 183 26.932 T 10-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CJM129_RS03875 b586f22c0bdd6f1c36eb91ebe26eb6f7 183 SUPERFAMILY SSF50249 1 63 1.03E-8 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 739 21.652 T 10-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 PANTHER PTHR12815 1 739 5.4E-137 T 10-11-2016 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 Gene3D G3DSA:2.40.160.50 434 739 8.6E-18 T 10-11-2016 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 PIRSF PIRSF006076 1 739 1.3E-202 T 10-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 Pfam PF01103 Surface antigen 442 739 7.2E-68 T 10-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 PANTHER PTHR12815:SF11 1 739 5.4E-137 T 10-11-2016 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 Pfam PF07244 Surface antigen variable number repeat 260 337 6.3E-6 T 10-11-2016 IPR010827 Surface antigen variable number GO:0019867 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 Pfam PF07244 Surface antigen variable number repeat 168 257 1.0E-6 T 10-11-2016 IPR010827 Surface antigen variable number GO:0019867 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 Pfam PF07244 Surface antigen variable number repeat 19 84 8.7E-5 T 10-11-2016 IPR010827 Surface antigen variable number GO:0019867 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 Pfam PF07244 Surface antigen variable number repeat 86 162 2.0E-7 T 10-11-2016 IPR010827 Surface antigen variable number GO:0019867 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 Pfam PF07244 Surface antigen variable number repeat 343 414 1.4E-12 T 10-11-2016 IPR010827 Surface antigen variable number GO:0019867 CJM129_RS00655 95cd67e8acabaf97a32494c32031c4f9 739 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 19 739 2.3E-209 T 10-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CJM129_RS02465 0c5cd8bd54bbb4e084a346e46b94e82c 81 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 76 1.9E-29 T 10-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS02465 0c5cd8bd54bbb4e084a346e46b94e82c 81 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 79 3.2E-29 T 10-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS02465 0c5cd8bd54bbb4e084a346e46b94e82c 81 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 20.967 T 10-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS02465 0c5cd8bd54bbb4e084a346e46b94e82c 81 Gene3D G3DSA:3.30.1280.10 1 80 1.1E-30 T 10-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS02465 0c5cd8bd54bbb4e084a346e46b94e82c 81 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 8 79 2.0E-32 T 10-11-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS02465 0c5cd8bd54bbb4e084a346e46b94e82c 81 PANTHER PTHR34696 1 81 7.9E-25 T 10-11-2016 CJM129_RS02465 0c5cd8bd54bbb4e084a346e46b94e82c 81 SUPERFAMILY SSF82697 2 76 9.42E-28 T 10-11-2016 CJM129_RS06260 c85ee5bbe33aa57152044546b758465d 282 PANTHER PTHR21091:SF31 131 279 1.5E-31 T 10-11-2016 CJM129_RS06260 c85ee5bbe33aa57152044546b758465d 282 SUPERFAMILY SSF51730 3 274 5.49E-85 T 10-11-2016 IPR029041 FAD-linked oxidoreductase-like CJM129_RS06260 c85ee5bbe33aa57152044546b758465d 282 Gene3D G3DSA:3.20.20.220 3 274 4.6E-98 T 10-11-2016 IPR029041 FAD-linked oxidoreductase-like CJM129_RS06260 c85ee5bbe33aa57152044546b758465d 282 Pfam PF02219 Methylenetetrahydrofolate reductase 3 272 1.1E-81 T 10-11-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CJM129_RS06260 c85ee5bbe33aa57152044546b758465d 282 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 272 2.5E-106 T 10-11-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 CJM129_RS06260 c85ee5bbe33aa57152044546b758465d 282 PANTHER PTHR21091 131 279 1.5E-31 T 10-11-2016 CJM129_RS02780 90d90849fc46f350da3f6958065507aa 154 Gene3D G3DSA:3.30.70.1150 82 151 5.4E-12 T 10-11-2016 CJM129_RS02780 90d90849fc46f350da3f6958065507aa 154 SUPERFAMILY SSF55021 2 74 4.01E-19 T 10-11-2016 CJM129_RS02780 90d90849fc46f350da3f6958065507aa 154 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 6.0E-37 T 10-11-2016 CJM129_RS02780 90d90849fc46f350da3f6958065507aa 154 Gene3D G3DSA:3.30.70.260 1 75 1.2E-30 T 10-11-2016 CJM129_RS02780 90d90849fc46f350da3f6958065507aa 154 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 151 1.2E-38 T 10-11-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS02780 90d90849fc46f350da3f6958065507aa 154 Pfam PF13710 ACT domain 13 68 2.8E-12 T 10-11-2016 CJM129_RS02780 90d90849fc46f350da3f6958065507aa 154 Pfam PF10369 Small subunit of acetolactate synthase 82 152 1.4E-11 T 10-11-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 CJM129_RS02780 90d90849fc46f350da3f6958065507aa 154 SUPERFAMILY SSF55021 75 151 2.59E-15 T 10-11-2016 CJM129_RS02780 90d90849fc46f350da3f6958065507aa 154 PANTHER PTHR30239 1 151 6.0E-40 T 10-11-2016 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 PANTHER PTHR11918 4 433 8.5E-138 T 10-11-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 Pfam PF00919 Uncharacterized protein family UPF0004 5 103 2.6E-27 T 10-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 Gene3D G3DSA:3.80.30.20 142 371 1.8E-72 T 10-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 145 165 - T 10-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 SUPERFAMILY SSF102114 123 366 7.72E-55 T 10-11-2016 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 PANTHER PTHR11918:SF43 4 433 8.5E-138 T 10-11-2016 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 5 433 8.9E-209 T 10-11-2016 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 Pfam PF04055 Radical SAM superfamily 145 318 2.4E-26 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 430 1.3E-142 T 10-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 SMART SM00729 141 359 5.0E-56 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 4 433 64.923 T 10-11-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CJM129_RS02220 4075b70f61dad0b7c773d087345487c8 433 Pfam PF01938 TRAM domain 373 433 1.9E-10 T 10-11-2016 IPR002792 TRAM domain CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 Gene3D G3DSA:3.30.300.30 521 631 1.3E-24 T 10-11-2016 CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 Pfam PF00501 AMP-binding enzyme 85 526 2.5E-88 T 10-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 Gene3D G3DSA:2.30.38.10 440 520 2.0E-9 T 10-11-2016 CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 Pfam PF13193 AMP-binding enzyme C-terminal domain 535 617 3.2E-19 T 10-11-2016 IPR025110 AMP-binding enzyme C-terminal domain CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 10-11-2016 IPR020845 AMP-binding, conserved site CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 PANTHER PTHR24095:SF178 1 651 7.2E-259 T 10-11-2016 CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 Gene3D G3DSA:3.40.50.980 266 424 4.4E-27 T 10-11-2016 CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 SUPERFAMILY SSF56801 16 647 1.7E-164 T 10-11-2016 CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 PANTHER PTHR24095 1 651 7.2E-259 T 10-11-2016 CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 28 83 2.4E-18 T 10-11-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 23 649 4.3E-296 T 10-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 CJM129_RS08160 320788e707f2bd9301aa64d7e005cf8b 657 Gene3D G3DSA:3.40.50.980 81 265 3.7E-40 T 10-11-2016 CJM129_RS03955 5bca2a5d4adfc267f9af56af7a66b51a 256 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 21 241 1.9E-56 T 10-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJM129_RS03955 5bca2a5d4adfc267f9af56af7a66b51a 256 PANTHER PTHR18966:SF152 19 240 2.7E-41 T 10-11-2016 CJM129_RS03955 5bca2a5d4adfc267f9af56af7a66b51a 256 PANTHER PTHR18966 19 240 2.7E-41 T 10-11-2016 CJM129_RS03955 5bca2a5d4adfc267f9af56af7a66b51a 256 Gene3D G3DSA:3.40.190.10 98 199 3.3E-20 T 10-11-2016 CJM129_RS03955 5bca2a5d4adfc267f9af56af7a66b51a 256 Gene3D G3DSA:3.40.190.10 19 97 3.0E-39 T 10-11-2016 CJM129_RS03955 5bca2a5d4adfc267f9af56af7a66b51a 256 Gene3D G3DSA:3.40.190.10 202 241 3.0E-39 T 10-11-2016 CJM129_RS03955 5bca2a5d4adfc267f9af56af7a66b51a 256 SUPERFAMILY SSF53850 1 241 5.85E-60 T 10-11-2016 CJM129_RS03955 5bca2a5d4adfc267f9af56af7a66b51a 256 SMART SM00079 20 242 5.5E-5 T 10-11-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CJM129_RS03955 5bca2a5d4adfc267f9af56af7a66b51a 256 SMART SM00062 20 243 2.7E-56 T 10-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJM129_RS09185 e09f08afff7172542f431cb85fb48af1 214 Gene3D G3DSA:2.40.160.20 13 214 8.1E-12 T 10-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJM129_RS09185 e09f08afff7172542f431cb85fb48af1 214 SUPERFAMILY SSF56925 25 214 7.59E-16 T 10-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJM129_RS09185 e09f08afff7172542f431cb85fb48af1 214 Pfam PF13505 Outer membrane protein beta-barrel domain 10 211 1.9E-13 T 10-11-2016 IPR027385 Outer membrane protein beta-barrel CJM129_RS09170 4c69f4f05c992be31581f61b098ee9eb 358 PANTHER PTHR11835:SF35 1 358 1.5E-184 T 10-11-2016 CJM129_RS09170 4c69f4f05c992be31581f61b098ee9eb 358 PANTHER PTHR11835 1 358 1.5E-184 T 10-11-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CJM129_RS09170 4c69f4f05c992be31581f61b098ee9eb 358 Gene3D G3DSA:3.40.718.10 1 354 1.3E-124 T 10-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CJM129_RS09170 4c69f4f05c992be31581f61b098ee9eb 358 SMART SM01329 5 348 4.3E-184 T 10-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CJM129_RS09170 4c69f4f05c992be31581f61b098ee9eb 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 348 1.3E-128 T 10-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CJM129_RS09170 4c69f4f05c992be31581f61b098ee9eb 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 241 260 - T 10-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 CJM129_RS09170 4c69f4f05c992be31581f61b098ee9eb 358 SUPERFAMILY SSF53659 2 353 2.69E-115 T 10-11-2016 CJM129_RS09170 4c69f4f05c992be31581f61b098ee9eb 358 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 344 1.5E-147 T 10-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 CJM129_RS09170 4c69f4f05c992be31581f61b098ee9eb 358 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 352 48.411 T 10-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 2 366 36.493 T 10-11-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 SUPERFAMILY SSF53448 4 202 1.35E-49 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 Gene3D G3DSA:3.30.1330.50 209 364 3.8E-62 T 10-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 PANTHER PTHR32125 1 69 2.8E-40 T 10-11-2016 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 PANTHER PTHR32125 222 367 2.8E-40 T 10-11-2016 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 Gene3D G3DSA:3.90.550.10 2 200 1.6E-56 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 Pfam PF02542 YgbB family 211 363 9.9E-57 T 10-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 202 2.7E-62 T 10-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 92 99 - T 10-11-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 SUPERFAMILY SSF69765 210 368 2.49E-57 T 10-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 199 6.4E-31 T 10-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 210 365 30.603 T 10-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 213 361 1.1E-53 T 10-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS08495 2ab78f5bd916c0b8fdf1d73ef2019e29 371 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 244 259 - T 10-11-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 PANTHER PTHR30244 398 575 8.6E-77 T 10-11-2016 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 Gene3D G3DSA:1.20.1330.10 477 531 5.0E-42 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 Gene3D G3DSA:1.20.1330.10 54 171 5.0E-42 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 Pfam PF00700 Bacterial flagellin C-terminal helical region 489 574 2.5E-25 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.6E-42 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 Pfam PF07196 Flagellin hook IN motif 187 240 4.6E-10 T 10-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 Pfam PF07196 Flagellin hook IN motif 252 301 2.4E-11 T 10-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 PANTHER PTHR30244 3 181 8.6E-77 T 10-11-2016 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 SUPERFAMILY SSF64518 443 575 5.1E-96 T 10-11-2016 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 SUPERFAMILY SSF64518 1 382 5.1E-96 T 10-11-2016 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 PRINTS PR00207 Flagellin signature 37 54 1.6E-20 T 10-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 PRINTS PR00207 Flagellin signature 111 134 1.6E-20 T 10-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 PRINTS PR00207 Flagellin signature 76 95 1.6E-20 T 10-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 PANTHER PTHR30244:SF1 3 181 8.6E-77 T 10-11-2016 CJM129_RS07175 afbfdf5c295bf46d0f18c925b983992c 575 PANTHER PTHR30244:SF1 398 575 8.6E-77 T 10-11-2016 CJM129_RS04330 b3b3ac70467e9c071b8bb8008c40c545 130 PANTHER PTHR23089 2 104 6.3E-38 T 10-11-2016 IPR001310 Histidine triad (HIT) protein CJM129_RS04330 b3b3ac70467e9c071b8bb8008c40c545 130 PRINTS PR00332 Histidine triad family signature 27 45 3.3E-16 T 10-11-2016 IPR001310 Histidine triad (HIT) protein CJM129_RS04330 b3b3ac70467e9c071b8bb8008c40c545 130 PRINTS PR00332 Histidine triad family signature 6 22 3.3E-16 T 10-11-2016 IPR001310 Histidine triad (HIT) protein CJM129_RS04330 b3b3ac70467e9c071b8bb8008c40c545 130 PRINTS PR00332 Histidine triad family signature 92 102 3.3E-16 T 10-11-2016 IPR001310 Histidine triad (HIT) protein CJM129_RS04330 b3b3ac70467e9c071b8bb8008c40c545 130 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 10-11-2016 IPR019808 Histidine triad, conserved site CJM129_RS04330 b3b3ac70467e9c071b8bb8008c40c545 130 Pfam PF01230 HIT domain 14 106 1.6E-26 T 10-11-2016 IPR001310 Histidine triad (HIT) protein CJM129_RS04330 b3b3ac70467e9c071b8bb8008c40c545 130 Gene3D G3DSA:3.30.428.10 2 106 1.7E-30 T 10-11-2016 IPR011146 HIT-like domain GO:0003824 CJM129_RS04330 b3b3ac70467e9c071b8bb8008c40c545 130 PANTHER PTHR23089:SF2 2 104 6.3E-38 T 10-11-2016 CJM129_RS04330 b3b3ac70467e9c071b8bb8008c40c545 130 SUPERFAMILY SSF54197 2 109 2.17E-30 T 10-11-2016 IPR011146 HIT-like domain GO:0003824 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 Pfam PF00206 Lyase 18 297 5.5E-45 T 10-11-2016 IPR022761 Fumarate lyase, N-terminal CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 2.0E-20 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.0E-20 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.0E-20 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PRINTS PR00149 Fumarate lyase superfamily signature 278 294 2.0E-20 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 Gene3D G3DSA:1.20.200.10 106 373 5.2E-81 T 10-11-2016 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 ProSitePatterns PS00163 Fumarate lyases signature. 278 287 - T 10-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PANTHER PTHR11444 16 455 1.9E-131 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 SUPERFAMILY SSF48557 10 449 3.77E-114 T 10-11-2016 IPR008948 L-Aspartase-like GO:0003824 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 1.5E-6 T 10-11-2016 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.5E-6 T 10-11-2016 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PRINTS PR00145 Argininosuccinate lyase family signature 278 294 1.5E-6 T 10-11-2016 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.5E-6 T 10-11-2016 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 Gene3D G3DSA:1.10.275.10 6 105 4.8E-33 T 10-11-2016 IPR024083 Fumarase/histidase, N-terminal CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 16 444 1.9E-106 T 10-11-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 Gene3D G3DSA:1.10.40.30 374 445 4.7E-26 T 10-11-2016 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 SMART SM00998 366 445 6.4E-29 T 10-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 PANTHER PTHR11444:SF21 16 455 1.9E-131 T 10-11-2016 CJM129_RS07460 b2a8f127eadaafc696be973ac6391dd8 455 Pfam PF10397 Adenylosuccinate lyase C-terminus 367 444 1.3E-18 T 10-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 PIRSF PIRSF002867 1 313 4.6E-101 T 10-11-2016 IPR024181 Chemotaxis response regulator CheV CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 Gene3D G3DSA:3.40.50.2300 184 317 1.7E-27 T 10-11-2016 CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 SUPERFAMILY SSF52172 183 315 4.55E-24 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 Pfam PF00072 Response regulator receiver domain 185 296 2.4E-15 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 PANTHER PTHR22617 33 176 8.3E-29 T 10-11-2016 CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 Pfam PF01584 CheW-like domain 31 162 8.5E-36 T 10-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 SUPERFAMILY SSF50341 12 163 1.23E-29 T 10-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 Gene3D G3DSA:2.30.30.40 101 146 1.5E-6 T 10-11-2016 CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 Gene3D G3DSA:2.40.50.180 62 100 5.1E-6 T 10-11-2016 CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 SMART SM00448 182 309 2.4E-19 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS01365 aeca5a2a28b0d0d13d30df9ab741d6b2 318 SMART SM00260 11 160 1.3E-36 T 10-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJM129_RS01480 9aae4541e098c7bb4f6bf0ef4d4f11b9 181 Pfam PF01195 Peptidyl-tRNA hydrolase 3 175 8.3E-53 T 10-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJM129_RS01480 9aae4541e098c7bb4f6bf0ef4d4f11b9 181 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 10-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CJM129_RS01480 9aae4541e098c7bb4f6bf0ef4d4f11b9 181 PANTHER PTHR17224:SF1 1 177 2.6E-52 T 10-11-2016 CJM129_RS01480 9aae4541e098c7bb4f6bf0ef4d4f11b9 181 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 103 113 - T 10-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CJM129_RS01480 9aae4541e098c7bb4f6bf0ef4d4f11b9 181 Gene3D G3DSA:3.40.50.1470 1 172 1.1E-55 T 10-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJM129_RS01480 9aae4541e098c7bb4f6bf0ef4d4f11b9 181 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 176 4.4E-53 T 10-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJM129_RS01480 9aae4541e098c7bb4f6bf0ef4d4f11b9 181 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 170 32.929 T 10-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJM129_RS01480 9aae4541e098c7bb4f6bf0ef4d4f11b9 181 PANTHER PTHR17224 1 177 2.6E-52 T 10-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJM129_RS01480 9aae4541e098c7bb4f6bf0ef4d4f11b9 181 SUPERFAMILY SSF53178 1 174 4.97E-55 T 10-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PANTHER PTHR11922 263 527 2.8E-88 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 Gene3D G3DSA:1.20.970.10 346 379 5.9E-23 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 Gene3D G3DSA:1.20.970.10 197 260 5.9E-23 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 Pfam PF00591 Glycosyl transferase family, a/b domain 269 519 9.8E-75 T 10-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PANTHER PTHR11922 215 229 2.8E-88 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 SUPERFAMILY SSF47648 201 260 5.1E-6 T 10-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.1E-5 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 1.1E-5 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 Gene3D G3DSA:3.40.1030.10 269 345 8.8E-70 T 10-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 Gene3D G3DSA:3.40.1030.10 380 530 8.8E-70 T 10-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00096 Glutamine amidotransferase superfamily signature 163 176 6.3E-12 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 6.3E-12 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.3E-12 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 185 2.4E-50 T 10-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 SUPERFAMILY SSF52317 1 186 3.13E-47 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 Gene3D G3DSA:3.40.50.880 1 185 3.3E-54 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 Pfam PF00117 Glutamine amidotransferase class-I 3 185 1.1E-42 T 10-11-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 200 530 30.618 T 10-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PANTHER PTHR11922:SF5 215 229 2.8E-88 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 SUPERFAMILY SSF52418 269 528 2.62E-78 T 10-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.3E-27 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00097 Anthranilate synthase component II signature 120 132 5.3E-27 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.3E-27 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00097 Anthranilate synthase component II signature 48 57 5.3E-27 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00097 Anthranilate synthase component II signature 163 176 5.3E-27 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.3E-27 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 PANTHER PTHR11922:SF5 263 527 2.8E-88 T 10-11-2016 CJM129_RS01650 3310470440cdfce0663c9ae03e385674 533 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 202 529 2.4E-123 T 10-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 Gene3D G3DSA:1.10.1060.10 148 190 3.2E-10 T 10-11-2016 CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 Gene3D G3DSA:1.10.1060.10 32 60 3.2E-10 T 10-11-2016 CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 SUPERFAMILY SSF54862 49 204 3.35E-23 T 10-11-2016 CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 PANTHER PTHR30176:SF3 2 226 1.5E-60 T 10-11-2016 CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 Gene3D G3DSA:3.30.70.20 61 101 2.4E-10 T 10-11-2016 CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 4 210 2.6E-57 T 10-11-2016 IPR004494 MauM/NapG ferredoxin-type protein CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 Pfam PF12838 4Fe-4S dicluster domain 137 190 2.1E-6 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 Pfam PF12838 4Fe-4S dicluster domain 51 106 2.0E-8 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 Gene3D G3DSA:3.30.70.20 102 147 1.6E-6 T 10-11-2016 CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 52 63 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS03785 bf0034d83580c29f05f2b42df75c2d62 246 PANTHER PTHR30176 2 226 1.5E-60 T 10-11-2016 CJM129_RS03535 60ae4d9f5d19004ce7bdbe2109920521 259 Gene3D G3DSA:1.10.3720.10 7 253 1.5E-36 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS03535 60ae4d9f5d19004ce7bdbe2109920521 259 PANTHER PTHR30193 1 259 3.1E-45 T 10-11-2016 CJM129_RS03535 60ae4d9f5d19004ce7bdbe2109920521 259 PANTHER PTHR30193:SF20 1 259 3.1E-45 T 10-11-2016 CJM129_RS03535 60ae4d9f5d19004ce7bdbe2109920521 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 257 6.4E-8 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS03535 60ae4d9f5d19004ce7bdbe2109920521 259 SUPERFAMILY SSF161098 9 254 1.12E-38 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS05900 bc7eabd79c182240b7b72791d022b23f 309 PANTHER PTHR22916 1 263 5.7E-37 T 10-11-2016 CJM129_RS05900 bc7eabd79c182240b7b72791d022b23f 309 Gene3D G3DSA:3.90.550.10 2 220 1.2E-41 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05900 bc7eabd79c182240b7b72791d022b23f 309 SUPERFAMILY SSF53448 2 221 3.13E-44 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05900 bc7eabd79c182240b7b72791d022b23f 309 Pfam PF00535 Glycosyl transferase family 2 5 131 3.4E-30 T 10-11-2016 IPR001173 Glycosyltransferase 2-like CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 PANTHER PTHR11624:SF20 16 208 1.6E-231 T 10-11-2016 CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 PANTHER PTHR11624:SF20 231 613 1.6E-231 T 10-11-2016 CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 Gene3D G3DSA:3.40.50.970 222 282 2.5E-34 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 Gene3D G3DSA:3.40.50.970 32 180 2.5E-34 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 SMART SM00861 309 473 5.7E-56 T 10-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 Pfam PF02780 Transketolase, C-terminal domain 484 600 4.7E-18 T 10-11-2016 IPR033248 Transketolase, C-terminal domain CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 7 272 9.9E-98 T 10-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 SUPERFAMILY SSF52518 7 189 4.37E-69 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 SUPERFAMILY SSF52518 233 371 4.37E-69 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 SUPERFAMILY SSF52922 479 613 1.11E-22 T 10-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 Pfam PF02779 Transketolase, pyrimidine binding domain 311 469 1.2E-30 T 10-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 612 1.8E-236 T 10-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 10-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 PANTHER PTHR11624 16 208 1.6E-231 T 10-11-2016 IPR033247 Transketolase family CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 ProSitePatterns PS00802 Transketolase signature 2. 415 431 - T 10-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 Gene3D G3DSA:3.40.50.920 484 613 5.2E-21 T 10-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 615 41.257 T 10-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 SUPERFAMILY SSF52518 308 487 1.62E-45 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 Gene3D G3DSA:3.40.50.970 283 470 1.2E-65 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS01525 dc091224272869d48cac419d69f63c2b 615 PANTHER PTHR11624 231 613 1.6E-231 T 10-11-2016 IPR033247 Transketolase family CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 PIRSF PIRSF000006 13 287 2.5E-72 T 10-11-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 PANTHER PTHR33751:SF1 31 287 5.6E-27 T 10-11-2016 CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 SUPERFAMILY SSF46626 61 196 1.32E-15 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 118 194 3.8E-7 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 210 280 3.1E-8 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 PANTHER PTHR33751 31 287 5.6E-27 T 10-11-2016 CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 SUPERFAMILY SSF46626 205 285 1.36E-16 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 43 89 1.6E-17 T 10-11-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 Gene3D G3DSA:1.10.760.10 205 285 8.6E-16 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07910 e2f69d53d34189afe67b3d94084dd4dc 287 Gene3D G3DSA:1.10.760.10 66 196 7.3E-16 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 SMART SM00382 374 557 1.4E-15 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 PANTHER PTHR24221 6 52 2.3E-115 T 10-11-2016 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 PANTHER PTHR24221 71 562 2.3E-115 T 10-11-2016 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 Gene3D G3DSA:1.20.1560.10 5 318 2.6E-21 T 10-11-2016 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 SUPERFAMILY SSF52540 344 562 1.46E-73 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 PANTHER PTHR24221:SF138 6 52 2.3E-115 T 10-11-2016 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 PANTHER PTHR24221:SF138 71 562 2.3E-115 T 10-11-2016 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 Pfam PF00005 ABC transporter 366 513 1.9E-38 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 Pfam PF00664 ABC transporter transmembrane region 17 297 2.2E-18 T 10-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 SUPERFAMILY SSF90123 489 498 2.88E-31 T 10-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 SUPERFAMILY SSF90123 3 317 2.88E-31 T 10-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJM129_RS05910 60cba4456443ffac2d8debd0e3fb4242 564 Gene3D G3DSA:3.40.50.300 349 562 7.3E-72 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08030 24df46750330b559639d06368337a3f5 737 SUPERFAMILY SSF53706 1 390 1.96E-127 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 Pfam PF01568 Molydopterin dinucleotide binding domain 601 727 2.1E-20 T 10-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 Gene3D G3DSA:3.40.50.740 232 372 8.8E-40 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 Gene3D G3DSA:2.40.40.20 430 460 2.5E-47 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 Gene3D G3DSA:2.40.40.20 596 734 2.5E-47 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 Gene3D G3DSA:2.40.40.20 551 562 2.5E-47 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 PANTHER PTHR11615:SF140 514 734 1.2E-114 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 PANTHER PTHR11615:SF140 191 389 1.2E-114 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 PANTHER PTHR11615:SF140 1 172 1.2E-114 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 SUPERFAMILY SSF50692 597 734 3.39E-34 T 10-11-2016 IPR009010 Aspartate decarboxylase-like domain CJM129_RS08030 24df46750330b559639d06368337a3f5 737 SUPERFAMILY SSF50692 535 565 3.39E-34 T 10-11-2016 IPR009010 Aspartate decarboxylase-like domain CJM129_RS08030 24df46750330b559639d06368337a3f5 737 Gene3D G3DSA:3.40.228.10 1 204 1.5E-69 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 PANTHER PTHR11615 514 734 1.2E-114 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 PANTHER PTHR11615 191 389 1.2E-114 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 PANTHER PTHR11615 1 172 1.2E-114 T 10-11-2016 CJM129_RS08030 24df46750330b559639d06368337a3f5 737 Pfam PF00384 Molybdopterin oxidoreductase 2 358 7.3E-39 T 10-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 579 605 - T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 Pfam PF04539 Sigma-70 region 3 464 540 5.1E-24 T 10-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 PANTHER PTHR30603:SF0 57 158 2.3E-160 T 10-11-2016 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 Gene3D G3DSA:1.10.10.10 458 509 2.5E-17 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 PRINTS PR00046 Major sigma-70 factor signature 557 569 2.3E-29 T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 PRINTS PR00046 Major sigma-70 factor signature 409 422 2.3E-29 T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 PRINTS PR00046 Major sigma-70 factor signature 579 594 2.3E-29 T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 PRINTS PR00046 Major sigma-70 factor signature 594 605 2.3E-29 T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 PRINTS PR00046 Major sigma-70 factor signature 433 441 2.3E-29 T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 PANTHER PTHR30603:SF0 336 622 2.3E-160 T 10-11-2016 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 381 618 9.5E-115 T 10-11-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 PANTHER PTHR30603 57 158 2.3E-160 T 10-11-2016 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 Pfam PF04545 Sigma-70, region 4 553 607 5.6E-20 T 10-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 PANTHER PTHR30603 336 622 2.3E-160 T 10-11-2016 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 Gene3D G3DSA:1.10.601.10 118 454 6.7E-85 T 10-11-2016 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 SUPERFAMILY SSF88946 121 452 2.04E-66 T 10-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 Pfam PF00140 Sigma-70 factor, region 1.2 105 136 9.0E-12 T 10-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 383 607 3.2E-41 T 10-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 409 422 - T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 SUPERFAMILY SSF88659 458 531 7.85E-17 T 10-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 SUPERFAMILY SSF88659 516 617 1.27E-26 T 10-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 Pfam PF04542 Sigma-70 region 2 387 454 3.7E-21 T 10-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 619 36.172 T 10-11-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CJM129_RS04865 35747c2425f294fcbf0a04e3888e599f 622 Gene3D G3DSA:1.10.10.10 547 619 1.1E-28 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS08390 30c826cc5a1e4ed485e3c4e8fe6f1a69 140 PANTHER PTHR22924:SF49 6 139 1.4E-36 T 10-11-2016 CJM129_RS08390 30c826cc5a1e4ed485e3c4e8fe6f1a69 140 SUPERFAMILY SSF46458 1 138 3.16E-35 T 10-11-2016 IPR009050 Globin-like CJM129_RS08390 30c826cc5a1e4ed485e3c4e8fe6f1a69 140 PANTHER PTHR22924 6 139 1.4E-36 T 10-11-2016 CJM129_RS08390 30c826cc5a1e4ed485e3c4e8fe6f1a69 140 Gene3D G3DSA:1.10.490.10 1 139 4.0E-48 T 10-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 CJM129_RS08390 30c826cc5a1e4ed485e3c4e8fe6f1a69 140 Pfam PF00042 Globin 5 102 1.4E-11 T 10-11-2016 IPR000971 Globin GO:0019825|GO:0020037 CJM129_RS02580 35b000667407d8e571e9cc7b78f5cf7c 87 Gene3D G3DSA:1.10.3350.10 5 85 1.3E-7 T 10-11-2016 IPR023126 HP0242-like domain CJM129_RS02580 35b000667407d8e571e9cc7b78f5cf7c 87 Pfam PF09442 Domain of unknown function (DUF2018) 8 85 3.9E-23 T 10-11-2016 IPR018563 Protein of unknown function DUF2018 CJM129_RS02580 35b000667407d8e571e9cc7b78f5cf7c 87 SUPERFAMILY SSF158752 1 85 2.88E-27 T 10-11-2016 CJM129_RS04440 5ff18cfe6e3b7039ac0bd4ff8d830e22 259 Gene3D G3DSA:3.40.190.10 121 223 1.1E-22 T 10-11-2016 CJM129_RS04440 5ff18cfe6e3b7039ac0bd4ff8d830e22 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 258 8.9E-43 T 10-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJM129_RS04440 5ff18cfe6e3b7039ac0bd4ff8d830e22 259 SMART SM00062 39 259 2.4E-50 T 10-11-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJM129_RS04440 5ff18cfe6e3b7039ac0bd4ff8d830e22 259 SUPERFAMILY SSF53850 10 258 2.51E-50 T 10-11-2016 CJM129_RS04440 5ff18cfe6e3b7039ac0bd4ff8d830e22 259 PANTHER PTHR18966:SF207 35 257 3.5E-28 T 10-11-2016 CJM129_RS04440 5ff18cfe6e3b7039ac0bd4ff8d830e22 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 10-11-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CJM129_RS04440 5ff18cfe6e3b7039ac0bd4ff8d830e22 259 Gene3D G3DSA:3.40.190.10 36 120 1.4E-28 T 10-11-2016 CJM129_RS04440 5ff18cfe6e3b7039ac0bd4ff8d830e22 259 Gene3D G3DSA:3.40.190.10 224 258 1.4E-28 T 10-11-2016 CJM129_RS04440 5ff18cfe6e3b7039ac0bd4ff8d830e22 259 PANTHER PTHR18966 35 257 3.5E-28 T 10-11-2016 CJM129_RS04090 115fc5e52b1402e9ee049d63cec86225 374 SUPERFAMILY SSF56300 151 371 3.54E-34 T 10-11-2016 IPR029052 Metallo-dependent phosphatase-like CJM129_RS04090 115fc5e52b1402e9ee049d63cec86225 374 PANTHER PTHR31302 1 374 1.8E-53 T 10-11-2016 CJM129_RS04090 115fc5e52b1402e9ee049d63cec86225 374 Pfam PF00149 Calcineurin-like phosphoesterase 151 314 3.4E-11 T 10-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CJM129_RS04090 115fc5e52b1402e9ee049d63cec86225 374 Gene3D G3DSA:3.60.21.10 150 323 1.1E-25 T 10-11-2016 IPR029052 Metallo-dependent phosphatase-like CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 Gene3D G3DSA:3.20.20.140 4 268 4.7E-46 T 10-11-2016 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 Pfam PF02811 PHP domain 6 185 3.2E-49 T 10-11-2016 IPR004013 PHP domain GO:0003824 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 SMART SM00481 5 72 1.3E-27 T 10-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 323 753 8.6E-179 T 10-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 PANTHER PTHR32294:SF0 1 300 0.0 T 10-11-2016 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 1050 0.0 T 10-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 PANTHER PTHR32294 1 300 0.0 T 10-11-2016 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 SUPERFAMILY SSF89550 4 275 2.75E-34 T 10-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 Pfam PF14579 Helix-hairpin-helix motif 827 917 1.9E-22 T 10-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 PANTHER PTHR32294 319 1066 0.0 T 10-11-2016 CJM129_RS03470 65f03e7612b84389cc1dc8d9e70b2020 1200 PANTHER PTHR32294:SF0 319 1066 0.0 T 10-11-2016 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 Gene3D G3DSA:3.90.600.10 325 414 1.4E-26 T 10-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 98 5.3E-23 T 10-11-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 SUPERFAMILY SSF56059 100 308 5.66E-51 T 10-11-2016 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 291 2.8E-74 T 10-11-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 Gene3D G3DSA:3.30.1490.20 118 186 1.9E-25 T 10-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 Gene3D G3DSA:3.30.470.20 187 322 5.7E-51 T 10-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 SMART SM01210 324 415 1.9E-38 T 10-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 Gene3D G3DSA:3.40.50.20 2 91 7.3E-22 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 SUPERFAMILY SSF52440 1 99 2.45E-23 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 325 412 2.7E-22 T 10-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 SUPERFAMILY SSF51246 323 415 2.75E-26 T 10-11-2016 IPR011054 Rudiment single hybrid motif CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 PANTHER PTHR10520 1 416 8.7E-183 T 10-11-2016 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 SMART SM01209 99 291 2.5E-116 T 10-11-2016 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 285 292 - T 10-11-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 415 1.2E-141 T 10-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS06505 e7d1f9465330b92ae2a04e4adbfb672e 416 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 415 37.83 T 10-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 499 2.9E-33 T 10-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 10-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 497 8.9E-225 T 10-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 PANTHER PTHR10277:SF9 3 508 4.2E-231 T 10-11-2016 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 3 509 41.742 T 10-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 SUPERFAMILY SSF110921 402 499 7.59E-20 T 10-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 SMART SM00917 371 500 1.3E-33 T 10-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 SUPERFAMILY SSF51569 3 293 7.33E-94 T 10-11-2016 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 Gene3D G3DSA:3.20.20.70 3 349 6.2E-139 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 PANTHER PTHR10277 3 508 4.2E-231 T 10-11-2016 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 200 213 - T 10-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 CJM129_RS09175 f203b3292a9573900ff9d6218f8d23c3 515 Pfam PF00682 HMGL-like 5 275 9.4E-99 T 10-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 SMART SM00663 257 536 2.9E-174 T 10-11-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 SUPERFAMILY SSF64484 16 942 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 SUPERFAMILY SSF64484 1276 1507 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 PANTHER PTHR19376 1234 1300 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 PANTHER PTHR19376 6 1161 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 PANTHER PTHR19376:SF32 1319 1404 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 PANTHER PTHR19376:SF32 1445 1505 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 Pfam PF04983 RNA polymerase Rpb1, domain 3 511 653 2.7E-26 T 10-11-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 Pfam PF04998 RNA polymerase Rpb1, domain 5 764 1414 2.5E-64 T 10-11-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 PANTHER PTHR19376 1319 1404 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 PANTHER PTHR19376 1445 1505 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 22 1507 0.0 T 10-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 Gene3D G3DSA:2.40.40.20 371 398 1.5E-37 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 Gene3D G3DSA:2.40.40.20 439 509 1.5E-37 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 PANTHER PTHR19376:SF32 6 1161 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 PANTHER PTHR19376:SF32 1234 1300 0.0 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 Gene3D G3DSA:2.40.50.100 1298 1354 2.5E-8 T 10-11-2016 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 Pfam PF05000 RNA polymerase Rpb1, domain 4 682 761 9.1E-17 T 10-11-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 364 1.4E-80 T 10-11-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 16 1516 10.657 T 10-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS02350 624b5a97ab4a7e2b93a1d1264a4c23b9 1517 Pfam PF00623 RNA polymerase Rpb1, domain 2 366 507 4.3E-36 T 10-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS07405 b28fdcac50a0320b8a85f5a7a1c019d1 236 SUPERFAMILY SSF52833 108 235 5.38E-18 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS07405 b28fdcac50a0320b8a85f5a7a1c019d1 236 Gene3D G3DSA:3.40.30.10 121 235 8.6E-16 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS07405 b28fdcac50a0320b8a85f5a7a1c019d1 236 Pfam PF13098 Thioredoxin-like domain 126 235 4.6E-10 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 Gene3D G3DSA:3.40.50.1370 1 135 6.6E-48 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PANTHER PTHR11405:SF16 1 293 3.5E-101 T 10-11-2016 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 SUPERFAMILY SSF53671 1 289 7.46E-85 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PANTHER PTHR11405 1 293 3.5E-101 T 10-11-2016 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 287 1.7E-22 T 10-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 290 4.8E-93 T 10-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 139 1.2E-39 T 10-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 1.6E-19 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 243 252 1.6E-19 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 1.6E-19 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 278 1.6E-19 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 Gene3D G3DSA:3.40.50.1370 136 268 2.0E-39 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 2.8E-29 T 10-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 247 252 2.8E-29 T 10-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 2.8E-29 T 10-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 2.8E-29 T 10-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 208 217 2.8E-29 T 10-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 285 2.8E-29 T 10-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS05755 ccb84a1020a61a79936ad4642a2876f2 295 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 292 38.049 T 10-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS03105 3da789863f6acd9acb17ae4351791f8e 507 Gene3D G3DSA:3.40.50.300 14 194 1.3E-12 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03105 3da789863f6acd9acb17ae4351791f8e 507 Gene3D G3DSA:3.40.50.300 306 482 8.0E-16 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03105 3da789863f6acd9acb17ae4351791f8e 507 PANTHER PTHR11059 2 507 3.0E-41 T 10-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CJM129_RS03105 3da789863f6acd9acb17ae4351791f8e 507 SUPERFAMILY SSF52540 1 187 1.27E-36 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03105 3da789863f6acd9acb17ae4351791f8e 507 SUPERFAMILY SSF52540 278 480 1.27E-36 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03105 3da789863f6acd9acb17ae4351791f8e 507 PIRSF PIRSF003128 1 507 8.3E-132 T 10-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 PANTHER PTHR32154:SF0 3 1185 0.0 T 10-11-2016 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 PIRSF PIRSF000159 1 1186 0.0 T 10-11-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 370 1.0E-15 T 10-11-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 SUPERFAMILY SSF52922 259 411 5.89E-48 T 10-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 SUPERFAMILY SSF52518 5 258 1.24E-75 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 247 6.4E-76 T 10-11-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Gene3D G3DSA:3.40.50.970 796 1176 2.3E-142 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Gene3D G3DSA:3.40.50.970 4 258 9.4E-110 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 692 703 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Gene3D G3DSA:4.10.780.10 637 671 1.0E-14 T 10-11-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1176 0.0 T 10-11-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Pfam PF12838 4Fe-4S dicluster domain 692 762 5.1E-9 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 PANTHER PTHR32154 3 1185 0.0 T 10-11-2016 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 962 1074 7.5E-10 T 10-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Gene3D G3DSA:3.40.920.10 416 624 5.7E-85 T 10-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Pfam PF10371 Domain of unknown function 628 680 4.4E-20 T 10-11-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Gene3D G3DSA:3.30.70.20 675 777 7.4E-19 T 10-11-2016 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 750 761 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 SUPERFAMILY SSF53323 416 662 3.01E-79 T 10-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 SUPERFAMILY SSF54862 671 837 8.51E-18 T 10-11-2016 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 1.1E-28 T 10-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 SUPERFAMILY SSF52518 794 1182 3.04E-123 T 10-11-2016 IPR029061 Thiamin diphosphate-binding fold CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 SMART SM00890 624 682 6.6E-25 T 10-11-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CJM129_RS07855 9c569fe00a66f3fd8e82375e9e1871c4 1186 Gene3D G3DSA:3.40.50.920 259 413 6.2E-62 T 10-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJM129_RS06955 4cfbf07aab3d8dc7001d92cdf2c049af 271 Pfam PF09312 SurA N-terminal domain 51 117 2.0E-8 T 10-11-2016 IPR015391 SurA N-terminal CJM129_RS06955 4cfbf07aab3d8dc7001d92cdf2c049af 271 PANTHER PTHR10657 4 268 1.2E-18 T 10-11-2016 CJM129_RS06955 4cfbf07aab3d8dc7001d92cdf2c049af 271 SUPERFAMILY SSF109998 21 173 1.12E-24 T 10-11-2016 IPR027304 Trigger factor/SurA domain CJM129_RS06955 4cfbf07aab3d8dc7001d92cdf2c049af 271 PANTHER PTHR10657:SF11 4 268 1.2E-18 T 10-11-2016 CJM129_RS07725 ed6b6e486fb39a3ecec48e2535969e78 135 Gene3D G3DSA:2.30.110.10 3 94 1.6E-5 T 10-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CJM129_RS07725 ed6b6e486fb39a3ecec48e2535969e78 135 PIRSF PIRSF009554 1 135 2.8E-45 T 10-11-2016 IPR011194 Uncharacterised protein family UPF0306 CJM129_RS02625 d05698b0f2c48c13a2c9ce1d2155fb45 642 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 256 496 6.4E-51 T 10-11-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CJM129_RS02625 d05698b0f2c48c13a2c9ce1d2155fb45 642 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 13 111 7.7E-16 T 10-11-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CJM129_RS02625 d05698b0f2c48c13a2c9ce1d2155fb45 642 PANTHER PTHR30288 554 640 5.0E-42 T 10-11-2016 CJM129_RS02625 d05698b0f2c48c13a2c9ce1d2155fb45 642 PANTHER PTHR30288 4 423 5.0E-42 T 10-11-2016 CJM129_RS02625 d05698b0f2c48c13a2c9ce1d2155fb45 642 PANTHER PTHR30288:SF0 554 640 5.0E-42 T 10-11-2016 CJM129_RS02625 d05698b0f2c48c13a2c9ce1d2155fb45 642 PANTHER PTHR30288:SF0 4 423 5.0E-42 T 10-11-2016 CJM129_RS02625 d05698b0f2c48c13a2c9ce1d2155fb45 642 Pfam PF07196 Flagellin hook IN motif 135 191 2.1E-8 T 10-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CJM129_RS08045 73506f3965284a833f17ce479186ac65 233 Gene3D G3DSA:1.10.3480.10 5 195 4.0E-18 T 10-11-2016 IPR020945 DMSO/Nitrate reductase chaperone CJM129_RS08045 73506f3965284a833f17ce479186ac65 233 Pfam PF02613 Nitrate reductase delta subunit 48 157 1.7E-6 T 10-11-2016 IPR020945 DMSO/Nitrate reductase chaperone CJM129_RS08045 73506f3965284a833f17ce479186ac65 233 SUPERFAMILY SSF89155 7 197 3.27E-40 T 10-11-2016 IPR020945 DMSO/Nitrate reductase chaperone CJM129_RS08000 3cfaf930f0841fb22459c0568a2751e3 190 Gene3D G3DSA:3.30.110.40 2 70 5.6E-15 T 10-11-2016 IPR001455 TusA-like domain CJM129_RS08000 3cfaf930f0841fb22459c0568a2751e3 190 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 3 190 7.7E-59 T 10-11-2016 IPR019870 Selenium metabolism protein YedF CJM129_RS08000 3cfaf930f0841fb22459c0568a2751e3 190 PANTHER PTHR33279 1 188 6.9E-31 T 10-11-2016 CJM129_RS08000 3cfaf930f0841fb22459c0568a2751e3 190 SUPERFAMILY SSF64307 2 69 2.35E-15 T 10-11-2016 IPR001455 TusA-like domain CJM129_RS08000 3cfaf930f0841fb22459c0568a2751e3 190 Gene3D G3DSA:3.40.1260.10 118 173 1.1E-5 T 10-11-2016 IPR027396 DsrEFH-like CJM129_RS08000 3cfaf930f0841fb22459c0568a2751e3 190 PANTHER PTHR33279:SF3 1 188 6.9E-31 T 10-11-2016 CJM129_RS08000 3cfaf930f0841fb22459c0568a2751e3 190 SUPERFAMILY SSF75169 96 178 2.51E-5 T 10-11-2016 IPR027396 DsrEFH-like CJM129_RS08000 3cfaf930f0841fb22459c0568a2751e3 190 Pfam PF01206 Sulfurtransferase TusA 2 69 2.4E-15 T 10-11-2016 IPR001455 TusA-like domain CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 Gene3D G3DSA:3.40.980.10 156 314 1.4E-38 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 Gene3D G3DSA:2.170.190.11 45 123 1.0E-21 T 10-11-2016 CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 PANTHER PTHR10192 22 381 2.0E-80 T 10-11-2016 CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 Pfam PF00994 Probable molybdopterin binding domain 177 294 1.7E-12 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 160 1.2E-29 T 10-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 SUPERFAMILY SSF53218 170 308 3.93E-24 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 SMART SM00852 173 305 3.8E-18 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 SUPERFAMILY SSF63882 3 169 9.42E-46 T 10-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 Gene3D G3DSA:3.90.105.10 124 155 3.1E-17 T 10-11-2016 CJM129_RS04145 f5e30ac9a418314b81afa844d7f582b5 386 SUPERFAMILY SSF63867 314 383 3.92E-7 T 10-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS00275 613d7dd576463aa9cc1144db6f3b6984 338 Gene3D G3DSA:3.40.50.620 2 195 3.1E-67 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS00275 613d7dd576463aa9cc1144db6f3b6984 338 Gene3D G3DSA:2.40.30.10 264 338 5.8E-19 T 10-11-2016 CJM129_RS00275 613d7dd576463aa9cc1144db6f3b6984 338 Gene3D G3DSA:2.30.30.280 204 260 1.1E-16 T 10-11-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 CJM129_RS00275 613d7dd576463aa9cc1144db6f3b6984 338 PANTHER PTHR11933:SF10 1 338 3.9E-123 T 10-11-2016 CJM129_RS00275 613d7dd576463aa9cc1144db6f3b6984 338 SUPERFAMILY SSF52402 1 231 4.41E-46 T 10-11-2016 CJM129_RS00275 613d7dd576463aa9cc1144db6f3b6984 338 PANTHER PTHR11933 1 338 3.9E-123 T 10-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CJM129_RS00275 613d7dd576463aa9cc1144db6f3b6984 338 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 338 36.436 T 10-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CJM129_RS00275 613d7dd576463aa9cc1144db6f3b6984 338 Pfam PF03054 tRNA methyl transferase 1 337 4.3E-109 T 10-11-2016 CJM129_RS00275 613d7dd576463aa9cc1144db6f3b6984 338 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 337 4.1E-106 T 10-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CJM129_RS02695 bed91ceefa0bfc046f39874b7113edec 309 PIRSF PIRSF028696 1 309 3.2E-100 T 10-11-2016 IPR016896 Protein of unknown function DUF2860 CJM129_RS02695 bed91ceefa0bfc046f39874b7113edec 309 Pfam PF11059 Protein of unknown function (DUF2860) 26 308 1.2E-85 T 10-11-2016 IPR016896 Protein of unknown function DUF2860 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 Pfam PF00117 Glutamine amidotransferase class-I 6 186 7.1E-47 T 10-11-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PANTHER PTHR11922 1 188 2.9E-66 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 Gene3D G3DSA:3.40.50.880 2 187 6.4E-62 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 9.2E-12 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 9.2E-12 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 9.2E-12 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 SUPERFAMILY SSF52317 1 187 4.06E-51 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.4E-26 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.4E-26 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PRINTS PR00097 Anthranilate synthase component II signature 77 88 1.4E-26 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PRINTS PR00097 Anthranilate synthase component II signature 102 110 1.4E-26 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PRINTS PR00097 Anthranilate synthase component II signature 122 134 1.4E-26 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PRINTS PR00097 Anthranilate synthase component II signature 50 59 1.4E-26 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 PANTHER PTHR11922:SF7 1 188 2.9E-66 T 10-11-2016 CJM129_RS04160 06dabbcbdc896b3ab5030997ab67aaa4 188 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 9.2E-50 T 10-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 Pfam PF00708 Acylphosphatase 6 89 6.1E-18 T 10-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 PANTHER PTHR10029 6 722 2.0E-234 T 10-11-2016 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 SUPERFAMILY SSF55821 174 387 8.24E-45 T 10-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 722 2.5E-203 T 10-11-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 PIRSF PIRSF006256 1 729 2.9E-259 T 10-11-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 Pfam PF07503 HypF finger 108 140 4.7E-14 T 10-11-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 Pfam PF07503 HypF finger 157 184 1.9E-13 T 10-11-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 Gene3D G3DSA:3.30.70.100 5 89 5.6E-22 T 10-11-2016 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 SUPERFAMILY SSF54975 4 90 7.41E-20 T 10-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 Pfam PF01300 Telomere recombination 210 380 3.4E-48 T 10-11-2016 IPR006070 YrdC-like domain GO:0003725 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 PANTHER PTHR10029:SF4 6 722 2.0E-234 T 10-11-2016 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 10-11-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CJM129_RS03010 5f49dd2a3300edea563222f52add4ace 729 Gene3D G3DSA:3.90.870.10 199 375 3.8E-45 T 10-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CJM129_RS05340 09a83194b2c823d69dcc3adc165cccbe 256 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS05340 09a83194b2c823d69dcc3adc165cccbe 256 SMART SM00382 27 237 1.6E-8 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS05340 09a83194b2c823d69dcc3adc165cccbe 256 PANTHER PTHR24220 4 102 7.5E-109 T 10-11-2016 CJM129_RS05340 09a83194b2c823d69dcc3adc165cccbe 256 PANTHER PTHR24220 118 251 7.5E-109 T 10-11-2016 CJM129_RS05340 09a83194b2c823d69dcc3adc165cccbe 256 SUPERFAMILY SSF52540 2 250 4.94E-63 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05340 09a83194b2c823d69dcc3adc165cccbe 256 Gene3D G3DSA:3.40.50.300 2 248 5.7E-70 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05340 09a83194b2c823d69dcc3adc165cccbe 256 PANTHER PTHR24220:SF358 4 102 7.5E-109 T 10-11-2016 CJM129_RS05340 09a83194b2c823d69dcc3adc165cccbe 256 Pfam PF00005 ABC transporter 19 178 2.0E-35 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS05340 09a83194b2c823d69dcc3adc165cccbe 256 PANTHER PTHR24220:SF358 118 251 7.5E-109 T 10-11-2016 CJM129_RS06595 4ce54463b3a963c86b71c04ebd08a8a7 659 SMART SM00646 497 652 1.3E-54 T 10-11-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CJM129_RS06595 4ce54463b3a963c86b71c04ebd08a8a7 659 PANTHER PTHR30404:SF0 433 655 4.0E-61 T 10-11-2016 CJM129_RS06595 4ce54463b3a963c86b71c04ebd08a8a7 659 PANTHER PTHR30404 433 655 4.0E-61 T 10-11-2016 CJM129_RS06595 4ce54463b3a963c86b71c04ebd08a8a7 659 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 436 652 8.7E-49 T 10-11-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CJM129_RS06595 4ce54463b3a963c86b71c04ebd08a8a7 659 Pfam PF11741 AMIN domain 173 249 2.1E-4 T 10-11-2016 IPR021731 AMIN domain CJM129_RS06595 4ce54463b3a963c86b71c04ebd08a8a7 659 SUPERFAMILY SSF53187 433 535 2.57E-47 T 10-11-2016 CJM129_RS06595 4ce54463b3a963c86b71c04ebd08a8a7 659 SUPERFAMILY SSF53187 575 655 2.57E-47 T 10-11-2016 CJM129_RS06595 4ce54463b3a963c86b71c04ebd08a8a7 659 Gene3D G3DSA:3.40.630.40 576 655 1.2E-55 T 10-11-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CJM129_RS06595 4ce54463b3a963c86b71c04ebd08a8a7 659 Gene3D G3DSA:3.40.630.40 433 536 1.2E-55 T 10-11-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 CJM129_RS02540 be29fcf9eae4863fa8581162c4f43c51 734 Pfam PF03971 Monomeric isocitrate dehydrogenase 3 729 0.0 T 10-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CJM129_RS02540 be29fcf9eae4863fa8581162c4f43c51 734 PIRSF PIRSF009407 1 732 0.0 T 10-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CJM129_RS02540 be29fcf9eae4863fa8581162c4f43c51 734 Gene3D G3DSA:3.40.718.10 529 636 1.1E-28 T 10-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CJM129_RS02540 be29fcf9eae4863fa8581162c4f43c51 734 Gene3D G3DSA:3.40.718.10 176 284 1.1E-28 T 10-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CJM129_RS02540 be29fcf9eae4863fa8581162c4f43c51 734 Gene3D G3DSA:3.40.718.10 334 357 1.1E-28 T 10-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CJM129_RS02540 be29fcf9eae4863fa8581162c4f43c51 734 PANTHER PTHR36999 1 733 7.5E-295 T 10-11-2016 CJM129_RS02540 be29fcf9eae4863fa8581162c4f43c51 734 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 731 0.0 T 10-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CJM129_RS02540 be29fcf9eae4863fa8581162c4f43c51 734 SUPERFAMILY SSF53659 2 731 0.0 T 10-11-2016 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 SUPERFAMILY SSF81342 12 228 7.06E-36 T 10-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 182 204 1.4E-28 T 10-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 18 41 1.4E-28 T 10-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 133 152 1.4E-28 T 10-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 213 226 1.4E-28 T 10-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 57 81 1.4E-28 T 10-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 182 199 - T 10-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 PANTHER PTHR30485 1 230 3.8E-46 T 10-11-2016 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 Gene3D G3DSA:1.20.950.20 12 228 3.9E-36 T 10-11-2016 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 Pfam PF01292 Prokaryotic cytochrome b561 16 221 3.6E-30 T 10-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 14 227 3.0E-86 T 10-11-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CJM129_RS06575 478e46e5ef41ae179369cd3e9774cccc 230 PANTHER PTHR30485:SF0 1 230 3.8E-46 T 10-11-2016 CJM129_RS01255 33d679e7e3cf6945e4f9b3cba69d86c7 331 PANTHER PTHR11647:SF59 3 321 2.6E-96 T 10-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01255 33d679e7e3cf6945e4f9b3cba69d86c7 331 Gene3D G3DSA:3.20.20.140 2 329 5.0E-97 T 10-11-2016 CJM129_RS01255 33d679e7e3cf6945e4f9b3cba69d86c7 331 PIRSF PIRSF001237 1 331 3.8E-115 T 10-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01255 33d679e7e3cf6945e4f9b3cba69d86c7 331 ProSitePatterns PS00483 Dihydroorotase signature 2. 235 246 - T 10-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01255 33d679e7e3cf6945e4f9b3cba69d86c7 331 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 2 329 1.7E-105 T 10-11-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01255 33d679e7e3cf6945e4f9b3cba69d86c7 331 PANTHER PTHR11647 3 321 2.6E-96 T 10-11-2016 CJM129_RS01255 33d679e7e3cf6945e4f9b3cba69d86c7 331 SUPERFAMILY SSF51556 2 329 9.46E-103 T 10-11-2016 IPR032466 Metal-dependent hydrolase CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 SMART SM00739 122 149 4.0E-4 T 10-11-2016 IPR005824 KOW CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 SMART SM00738 3 111 6.1E-39 T 10-11-2016 IPR006645 NusG, N-terminal GO:0006355 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 Pfam PF02357 Transcription termination factor nusG 5 107 7.3E-22 T 10-11-2016 IPR006645 NusG, N-terminal GO:0006355 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 SUPERFAMILY SSF82679 4 112 3.14E-30 T 10-11-2016 IPR006645 NusG, N-terminal GO:0006355 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 3 176 20.63 T 10-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 Gene3D G3DSA:2.30.30.30 116 176 4.2E-26 T 10-11-2016 IPR014722 Ribosomal protein L2 domain 2 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 PANTHER PTHR30265 5 177 4.0E-56 T 10-11-2016 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 6 176 3.0E-57 T 10-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 159 168 - T 10-11-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 PRINTS PR00338 Transcription termination factor NUSG signature 152 168 2.0E-12 T 10-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 PRINTS PR00338 Transcription termination factor NUSG signature 58 70 2.0E-12 T 10-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 PRINTS PR00338 Transcription termination factor NUSG signature 134 149 2.0E-12 T 10-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 SUPERFAMILY SSF50104 120 176 1.81E-15 T 10-11-2016 IPR008991 Translation protein SH3-like domain CJM129_RS02320 76ea4d230598420a7956a3557d4ab294 177 Gene3D G3DSA:3.30.70.940 4 113 3.3E-34 T 10-11-2016 IPR006645 NusG, N-terminal GO:0006355 CJM129_RS02950 36a0f35819f33090db11a1d9f817b7cc 392 Gene3D G3DSA:3.40.50.1110 67 92 1.2E-28 T 10-11-2016 IPR013830 SGNH hydrolase-type esterase domain CJM129_RS02950 36a0f35819f33090db11a1d9f817b7cc 392 Gene3D G3DSA:3.40.50.1110 225 390 1.2E-28 T 10-11-2016 IPR013830 SGNH hydrolase-type esterase domain CJM129_RS02950 36a0f35819f33090db11a1d9f817b7cc 392 SUPERFAMILY SSF52266 226 389 1.68E-24 T 10-11-2016 IPR013830 SGNH hydrolase-type esterase domain CJM129_RS02950 36a0f35819f33090db11a1d9f817b7cc 392 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 71 382 4.3E-15 T 10-11-2016 IPR001087 GDSL lipase/esterase GO:0016788 CJM129_RS08315 f0e8599b9bc6cd01c31e9b7d770b85f1 213 PANTHER PTHR10849 1 160 1.1E-36 T 10-11-2016 CJM129_RS08315 f0e8599b9bc6cd01c31e9b7d770b85f1 213 Gene3D G3DSA:1.10.1060.10 37 140 1.4E-16 T 10-11-2016 CJM129_RS08315 f0e8599b9bc6cd01c31e9b7d770b85f1 213 Pfam PF12838 4Fe-4S dicluster domain 82 134 2.8E-10 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS08315 f0e8599b9bc6cd01c31e9b7d770b85f1 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 122 133 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS08315 f0e8599b9bc6cd01c31e9b7d770b85f1 213 SUPERFAMILY SSF54862 55 152 2.89E-21 T 10-11-2016 CJM129_RS08315 f0e8599b9bc6cd01c31e9b7d770b85f1 213 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 36 160 5.5E-39 T 10-11-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 CJM129_RS08315 f0e8599b9bc6cd01c31e9b7d770b85f1 213 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 27 165 23.888 T 10-11-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 7 582 2.5E-142 T 10-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 SUPERFAMILY SSF47781 520 599 1.05E-7 T 10-11-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 Gene3D G3DSA:1.10.150.20 565 599 5.3E-4 T 10-11-2016 CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 Pfam PF02151 UvrB/uvrC motif 205 237 2.0E-8 T 10-11-2016 IPR001943 UVR domain GO:0005515 CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 Gene3D G3DSA:3.40.1440.10 16 102 1.5E-13 T 10-11-2016 IPR027299 GIY-YIG domain CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 600 22.786 T 10-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 PANTHER PTHR30562:SF1 3 600 5.8E-138 T 10-11-2016 CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 SMART SM00465 16 104 1.2E-19 T 10-11-2016 IPR000305 GIY-YIG nuclease superfamily CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 Pfam PF01541 GIY-YIG catalytic domain 18 99 3.4E-11 T 10-11-2016 IPR000305 GIY-YIG nuclease superfamily CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 SUPERFAMILY SSF82771 16 106 9.29E-21 T 10-11-2016 IPR000305 GIY-YIG nuclease superfamily CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 SUPERFAMILY SSF46600 205 238 4.71E-8 T 10-11-2016 IPR001943 UVR domain GO:0005515 CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 Gene3D G3DSA:4.10.860.10 205 240 1.6E-10 T 10-11-2016 IPR001943 UVR domain GO:0005515 CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 385 537 1.7E-36 T 10-11-2016 IPR001162 UvrC family homology region CJM129_RS06485 5e6721b5c943657280741b02c7a9af61 600 PANTHER PTHR30562 3 600 5.8E-138 T 10-11-2016 CJM129_RS06525 eed0adc924d02d8f295d4f454aa4d7eb 160 SUPERFAMILY SSF52141 8 157 5.23E-33 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS06525 eed0adc924d02d8f295d4f454aa4d7eb 160 Gene3D G3DSA:3.40.470.10 8 158 1.1E-37 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS06525 eed0adc924d02d8f295d4f454aa4d7eb 160 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 9 151 1.6E-34 T 10-11-2016 IPR026353 Hypoxanthine-DNA glycosylase CJM129_RS06525 eed0adc924d02d8f295d4f454aa4d7eb 160 SMART SM00986 10 150 0.0021 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS06525 eed0adc924d02d8f295d4f454aa4d7eb 160 SMART SM00987 10 150 0.0021 T 10-11-2016 CJM129_RS06525 eed0adc924d02d8f295d4f454aa4d7eb 160 Pfam PF03167 Uracil DNA glycosylase superfamily 12 147 1.3E-13 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS07010 6a7f4adf6974cff0eccc68d58064a18b 520 Gene3D G3DSA:3.40.50.1000 182 311 1.0E-15 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS07010 6a7f4adf6974cff0eccc68d58064a18b 520 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 184 301 6.3E-28 T 10-11-2016 IPR010033 HAD-superfamily phosphatase, subfamily IIIC CJM129_RS07010 6a7f4adf6974cff0eccc68d58064a18b 520 SUPERFAMILY SSF56784 183 313 1.77E-15 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS07010 6a7f4adf6974cff0eccc68d58064a18b 520 TIGRFAM TIGR01686 FkbH: FkbH domain 181 500 1.9E-141 T 10-11-2016 IPR010037 FkbH domain CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 223 236 - T 10-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 352 54.746 T 10-11-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 193 334 7.7E-61 T 10-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 SUPERFAMILY SSF54211 165 247 3.79E-30 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 316 328 - T 10-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 165 352 34.71 T 10-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 PANTHER PTHR23133:SF2 161 352 1.6E-139 T 10-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 5.5E-25 T 10-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 Pfam PF08645 Polynucleotide kinase 3 phosphatase 4 130 4.6E-8 T 10-11-2016 IPR013954 Polynucleotide kinase 3 phosphatase CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 SUPERFAMILY SSF56784 1 148 4.96E-38 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 161 2.8E-81 T 10-11-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 SUPERFAMILY SSF54211 249 339 1.64E-29 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 PANTHER PTHR23133 161 352 1.6E-139 T 10-11-2016 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 PANTHER PTHR23133 10 97 1.6E-139 T 10-11-2016 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 Gene3D G3DSA:3.40.50.1000 1 158 2.7E-40 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 Gene3D G3DSA:3.30.230.40 165 250 1.5E-36 T 10-11-2016 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 144 1.4E-42 T 10-11-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 Gene3D G3DSA:3.30.230.40 255 352 5.5E-28 T 10-11-2016 CJM129_RS08455 654f4d71877bc50299b2d73a11722c36 352 PANTHER PTHR23133:SF2 10 97 1.6E-139 T 10-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 CJM129_RS02395 76e952dfe7aadbfc1504f67e922de360 258 PANTHER PTHR22854:SF2 2 258 1.3E-95 T 10-11-2016 CJM129_RS02395 76e952dfe7aadbfc1504f67e922de360 258 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 258 32.283 T 10-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CJM129_RS02395 76e952dfe7aadbfc1504f67e922de360 258 PANTHER PTHR22854 2 258 1.3E-95 T 10-11-2016 CJM129_RS02395 76e952dfe7aadbfc1504f67e922de360 258 Gene3D G3DSA:3.20.20.70 1 258 1.3E-96 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS02395 76e952dfe7aadbfc1504f67e922de360 258 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 257 7.5E-87 T 10-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CJM129_RS02395 76e952dfe7aadbfc1504f67e922de360 258 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 33 255 30.34 T 10-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CJM129_RS02395 76e952dfe7aadbfc1504f67e922de360 258 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 53 71 - T 10-11-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 CJM129_RS02395 76e952dfe7aadbfc1504f67e922de360 258 SUPERFAMILY SSF51366 11 257 2.12E-82 T 10-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJM129_RS03685 4c80f69483c8ac454f9821a7d2f4f9a1 113 SUPERFAMILY SSF51182 7 94 2.21E-10 T 10-11-2016 IPR011051 RmlC-like cupin domain CJM129_RS03685 4c80f69483c8ac454f9821a7d2f4f9a1 113 Gene3D G3DSA:2.60.120.10 9 93 1.1E-11 T 10-11-2016 IPR014710 RmlC-like jelly roll fold CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 657 39.855 T 10-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Gene3D G3DSA:3.40.50.300 4 86 4.8E-46 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Gene3D G3DSA:3.40.50.300 275 338 4.8E-46 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Gene3D G3DSA:3.40.50.300 388 406 4.8E-46 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 SUPERFAMILY SSF52540 3 415 1.38E-123 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Gene3D G3DSA:3.40.50.300 421 577 3.5E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 PANTHER PTHR24029 1 657 0.0 T 10-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 655 3.1E-291 T 10-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Pfam PF12344 Ultra-violet resistance protein B 552 593 1.5E-17 T 10-11-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Gene3D G3DSA:3.30.2060.10 158 224 1.0E-11 T 10-11-2016 CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Gene3D G3DSA:4.10.860.10 607 656 8.5E-16 T 10-11-2016 IPR001943 UVR domain GO:0005515 CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 SUPERFAMILY SSF46600 613 656 2.09E-11 T 10-11-2016 IPR001943 UVR domain GO:0005515 CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Pfam PF00271 Helicase conserved C-terminal domain 438 545 9.1E-19 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Pfam PF04851 Type III restriction enzyme, res subunit 8 116 7.6E-12 T 10-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 Pfam PF02151 UvrB/uvrC motif 623 656 9.4E-10 T 10-11-2016 IPR001943 UVR domain GO:0005515 CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 SUPERFAMILY SSF52540 34 79 4.48E-33 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 SUPERFAMILY SSF52540 459 579 4.48E-33 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 SMART SM00487 6 426 2.4E-25 T 10-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJM129_RS03280 aa15a5c40c4622b0a3c2c89b0fc68e19 657 SMART SM00490 460 546 7.3E-18 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS02275 e467371874f40741662024c1af4e6f64 245 PANTHER PTHR24220:SF474 5 239 6.2E-125 T 10-11-2016 CJM129_RS02275 e467371874f40741662024c1af4e6f64 245 Gene3D G3DSA:3.40.50.300 2 238 7.7E-83 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02275 e467371874f40741662024c1af4e6f64 245 Pfam PF00005 ABC transporter 19 167 7.6E-37 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS02275 e467371874f40741662024c1af4e6f64 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS02275 e467371874f40741662024c1af4e6f64 245 PANTHER PTHR24220 5 239 6.2E-125 T 10-11-2016 CJM129_RS02275 e467371874f40741662024c1af4e6f64 245 SUPERFAMILY SSF52540 3 237 4.6E-76 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02275 e467371874f40741662024c1af4e6f64 245 SMART SM00382 28 215 6.3E-13 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS02275 e467371874f40741662024c1af4e6f64 245 PIRSF PIRSF039085 1 242 3.4E-104 T 10-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CJM129_RS08210 eb3b580f127154113390c76f124df948 149 PANTHER PTHR10612 7 142 2.1E-18 T 10-11-2016 CJM129_RS08210 eb3b580f127154113390c76f124df948 149 SUPERFAMILY SSF50814 4 146 3.08E-25 T 10-11-2016 IPR011038 Calycin-like CJM129_RS08210 eb3b580f127154113390c76f124df948 149 PRINTS PR01171 Bacterial lipocalin signature 112 123 8.1E-6 T 10-11-2016 IPR002446 Lipocalin, bacterial GO:0005215 CJM129_RS08210 eb3b580f127154113390c76f124df948 149 PRINTS PR01171 Bacterial lipocalin signature 97 105 8.1E-6 T 10-11-2016 IPR002446 Lipocalin, bacterial GO:0005215 CJM129_RS08210 eb3b580f127154113390c76f124df948 149 PRINTS PR01171 Bacterial lipocalin signature 138 148 8.1E-6 T 10-11-2016 IPR002446 Lipocalin, bacterial GO:0005215 CJM129_RS08210 eb3b580f127154113390c76f124df948 149 PRINTS PR01171 Bacterial lipocalin signature 8 22 8.1E-6 T 10-11-2016 IPR002446 Lipocalin, bacterial GO:0005215 CJM129_RS08210 eb3b580f127154113390c76f124df948 149 Gene3D G3DSA:2.40.128.20 7 145 4.5E-30 T 10-11-2016 IPR012674 Calycin CJM129_RS08210 eb3b580f127154113390c76f124df948 149 Pfam PF08212 Lipocalin-like domain 9 144 1.5E-32 T 10-11-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CJM129_RS08210 eb3b580f127154113390c76f124df948 149 PIRSF PIRSF036893 2 149 5.2E-34 T 10-11-2016 IPR022271 Lipocalin, ApoD type CJM129_RS08180 de8a3dc5584cb78df923250df5241151 255 PANTHER PTHR30292 1 253 3.7E-127 T 10-11-2016 CJM129_RS08180 de8a3dc5584cb78df923250df5241151 255 SUPERFAMILY SSF88713 3 253 1.26E-101 T 10-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CJM129_RS08180 de8a3dc5584cb78df923250df5241151 255 PANTHER PTHR30292:SF0 1 253 3.7E-127 T 10-11-2016 CJM129_RS08180 de8a3dc5584cb78df923250df5241151 255 Pfam PF03746 LamB/YcsF family 4 241 7.1E-102 T 10-11-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CJM129_RS08180 de8a3dc5584cb78df923250df5241151 255 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 46.26 T 10-11-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CJM129_RS07930 931917d11cb20e20b886148f2153f641 226 Gene3D G3DSA:3.40.50.2300 9 136 6.5E-35 T 10-11-2016 CJM129_RS07930 931917d11cb20e20b886148f2153f641 226 PANTHER PTHR26402 8 221 5.8E-45 T 10-11-2016 CJM129_RS07930 931917d11cb20e20b886148f2153f641 226 SUPERFAMILY SSF52172 9 179 5.98E-37 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS07930 931917d11cb20e20b886148f2153f641 226 Gene3D G3DSA:1.10.10.10 137 223 5.7E-15 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS07930 931917d11cb20e20b886148f2153f641 226 Pfam PF00072 Response regulator receiver domain 10 119 1.6E-27 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS07930 931917d11cb20e20b886148f2153f641 226 SMART SM00448 8 119 1.6E-30 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS07930 931917d11cb20e20b886148f2153f641 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 222 2.0E-12 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS07930 931917d11cb20e20b886148f2153f641 226 SMART SM00862 153 222 1.9E-11 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS04870 1ad604d73fbaabca9c2d33468c1c6f7d 170 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 70 4.2E-7 T 10-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 CJM129_RS04870 1ad604d73fbaabca9c2d33468c1c6f7d 170 SUPERFAMILY SSF53254 1 143 8.57E-23 T 10-11-2016 IPR029033 Histidine phosphatase superfamily CJM129_RS04870 1ad604d73fbaabca9c2d33468c1c6f7d 170 Gene3D G3DSA:3.40.50.1240 1 162 3.0E-44 T 10-11-2016 IPR029033 Histidine phosphatase superfamily CJM129_RS01140 727640cc378a8149e3179e972b41943b 123 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 71 8.0E-18 T 10-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CJM129_RS01140 727640cc378a8149e3179e972b41943b 123 Pfam PF03840 Preprotein translocase SecG subunit 4 71 1.0E-14 T 10-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CJM129_RS01140 727640cc378a8149e3179e972b41943b 123 PRINTS PR01651 Protein-export SecG membrane protein signature 1 20 2.2E-5 T 10-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CJM129_RS01140 727640cc378a8149e3179e972b41943b 123 PRINTS PR01651 Protein-export SecG membrane protein signature 52 74 2.2E-5 T 10-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CJM129_RS01140 727640cc378a8149e3179e972b41943b 123 PRINTS PR01651 Protein-export SecG membrane protein signature 36 52 2.2E-5 T 10-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 Pfam PF00406 Adenylate kinase 7 164 1.2E-37 T 10-11-2016 CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 PANTHER PTHR23359 6 189 4.8E-44 T 10-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 ProSitePatterns PS00113 Adenylate kinase signature. 84 95 - T 10-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 Gene3D G3DSA:3.40.50.300 5 188 1.6E-46 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 Hamap MF_00235 Adenylate kinase [adk]. 3 187 37.138 T 10-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 SUPERFAMILY SSF52540 4 189 7.04E-33 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 PRINTS PR00094 Adenylate kinase signature 84 100 6.5E-25 T 10-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 PRINTS PR00094 Adenylate kinase signature 36 50 6.5E-25 T 10-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 PRINTS PR00094 Adenylate kinase signature 6 19 6.5E-25 T 10-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 PRINTS PR00094 Adenylate kinase signature 151 165 6.5E-25 T 10-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CJM129_RS03090 b018d2877886a3b51124cfd715d07ed8 192 PRINTS PR00094 Adenylate kinase signature 134 149 6.5E-25 T 10-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 CJM129_RS03120 3f27cc173905ad97bb0923d431c39d80 372 Pfam PF01476 LysM domain 312 354 1.7E-14 T 10-11-2016 IPR018392 LysM domain CJM129_RS03120 3f27cc173905ad97bb0923d431c39d80 372 Pfam PF01464 Transglycosylase SLT domain 81 181 2.6E-27 T 10-11-2016 IPR008258 Transglycosylase SLT domain 1 CJM129_RS03120 3f27cc173905ad97bb0923d431c39d80 372 Gene3D G3DSA:1.10.530.10 69 213 1.0E-38 T 10-11-2016 CJM129_RS03120 3f27cc173905ad97bb0923d431c39d80 372 SUPERFAMILY SSF54106 310 354 3.79E-12 T 10-11-2016 IPR018392 LysM domain CJM129_RS03120 3f27cc173905ad97bb0923d431c39d80 372 PANTHER PTHR21666 74 362 5.7E-57 T 10-11-2016 CJM129_RS03120 3f27cc173905ad97bb0923d431c39d80 372 SMART SM00257 311 354 6.9E-16 T 10-11-2016 IPR018392 LysM domain CJM129_RS03120 3f27cc173905ad97bb0923d431c39d80 372 PANTHER PTHR21666:SF219 74 362 5.7E-57 T 10-11-2016 CJM129_RS03120 3f27cc173905ad97bb0923d431c39d80 372 Gene3D G3DSA:3.10.350.10 310 355 3.9E-18 T 10-11-2016 IPR018392 LysM domain CJM129_RS03120 3f27cc173905ad97bb0923d431c39d80 372 SUPERFAMILY SSF53955 72 211 3.09E-31 T 10-11-2016 IPR023346 Lysozyme-like domain CJM129_RS05885 57bc058632b64b8a51dadf16c0073b5a 376 Pfam PF13477 Glycosyl transferase 4-like 10 151 1.3E-12 T 10-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CJM129_RS05885 57bc058632b64b8a51dadf16c0073b5a 376 Pfam PF00534 Glycosyl transferases group 1 190 351 6.9E-38 T 10-11-2016 IPR001296 Glycosyl transferase, family 1 CJM129_RS05885 57bc058632b64b8a51dadf16c0073b5a 376 PANTHER PTHR12526 1 374 6.1E-44 T 10-11-2016 CJM129_RS05885 57bc058632b64b8a51dadf16c0073b5a 376 Gene3D G3DSA:3.40.50.2000 189 350 6.5E-20 T 10-11-2016 CJM129_RS05885 57bc058632b64b8a51dadf16c0073b5a 376 SUPERFAMILY SSF53756 20 374 6.48E-65 T 10-11-2016 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 PANTHER PTHR10744 5 83 2.4E-23 T 10-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 SUPERFAMILY SSF50249 4 79 3.0E-26 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 4 74 5.0E-29 T 10-11-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 4 70 5.0E-31 T 10-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 Pfam PF00366 Ribosomal protein S17 9 74 2.2E-26 T 10-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 ProSitePatterns PS00056 Ribosomal protein S17 signature. 55 67 - T 10-11-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 PRINTS PR00973 Ribosomal protein S17 family signature 55 65 1.0E-10 T 10-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 PRINTS PR00973 Ribosomal protein S17 family signature 65 72 1.0E-10 T 10-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 PRINTS PR00973 Ribosomal protein S17 family signature 23 46 1.0E-10 T 10-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 2 80 21.396 T 10-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09050 2ddc7f81502f95332576c71ae749ad46 83 Gene3D G3DSA:2.40.50.140 4 79 5.0E-27 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS01380 1ada45abbb4939f5b673cacc2f30d765 364 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 329 2.2E-70 T 10-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CJM129_RS01380 1ada45abbb4939f5b673cacc2f30d765 364 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 1 364 32.314 T 10-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CJM129_RS01380 1ada45abbb4939f5b673cacc2f30d765 364 PANTHER PTHR30372:SF0 52 333 3.1E-53 T 10-11-2016 CJM129_RS01380 1ada45abbb4939f5b673cacc2f30d765 364 Pfam PF02684 Lipid-A-disaccharide synthetase 6 325 9.0E-85 T 10-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 CJM129_RS01380 1ada45abbb4939f5b673cacc2f30d765 364 SUPERFAMILY SSF53756 59 280 9.42E-15 T 10-11-2016 CJM129_RS01380 1ada45abbb4939f5b673cacc2f30d765 364 PANTHER PTHR30372 52 333 3.1E-53 T 10-11-2016 CJM129_RS01370 b7ac5150616a2953f802b8667a8315af 211 SUPERFAMILY SSF56300 2 98 5.6E-10 T 10-11-2016 IPR029052 Metallo-dependent phosphatase-like CJM129_RS01370 b7ac5150616a2953f802b8667a8315af 211 SUPERFAMILY SSF56300 141 189 5.6E-10 T 10-11-2016 IPR029052 Metallo-dependent phosphatase-like CJM129_RS01370 b7ac5150616a2953f802b8667a8315af 211 Gene3D G3DSA:3.60.21.10 2 92 5.5E-7 T 10-11-2016 IPR029052 Metallo-dependent phosphatase-like CJM129_RS01370 b7ac5150616a2953f802b8667a8315af 211 Gene3D G3DSA:3.60.21.10 129 203 5.5E-7 T 10-11-2016 IPR029052 Metallo-dependent phosphatase-like CJM129_RS07115 9d005a913163b60e628e9ef9f6b2ac2a 373 SUPERFAMILY SSF52402 41 177 1.37E-12 T 10-11-2016 CJM129_RS07115 9d005a913163b60e628e9ef9f6b2ac2a 373 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 1 350 7.9E-123 T 10-11-2016 IPR020022 N-acetyl sugar amidotransferase CJM129_RS07115 9d005a913163b60e628e9ef9f6b2ac2a 373 Gene3D G3DSA:3.40.50.620 52 183 6.9E-7 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Pfam PF02491 SHS2 domain inserted in FTSA 77 154 4.7E-22 T 10-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Gene3D G3DSA:3.30.420.40 3 75 2.3E-20 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Gene3D G3DSA:3.30.420.40 146 201 2.3E-20 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 PIRSF PIRSF003101 2 460 8.6E-99 T 10-11-2016 IPR020823 Cell division protein FtsA GO:0007049 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 PANTHER PTHR32432 3 446 4.5E-89 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Gene3D G3DSA:3.30.420.40 202 227 4.3E-18 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Gene3D G3DSA:3.30.420.40 289 338 4.3E-18 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 SMART SM00842 3 189 5.7E-82 T 10-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 SUPERFAMILY SSF53067 192 371 5.35E-28 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Pfam PF14450 Cell division protein FtsA 200 368 9.5E-15 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Pfam PF14450 Cell division protein FtsA 5 188 1.0E-9 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 457 24.601 T 10-11-2016 IPR020823 Cell division protein FtsA GO:0007049 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 2 372 1.1E-137 T 10-11-2016 IPR020823 Cell division protein FtsA GO:0007049 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Gene3D G3DSA:3.30.1490.110 92 145 1.4E-10 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 SUPERFAMILY SSF53067 3 190 3.18E-49 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 PANTHER PTHR32432:SF4 3 446 4.5E-89 T 10-11-2016 CJM129_RS03355 9090362829a54891ecab3e615f9132bb 460 Gene3D G3DSA:3.90.640.10 228 288 2.6E-11 T 10-11-2016 CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 PANTHER PTHR24423 151 392 6.1E-20 T 10-11-2016 CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 SMART SM00387 310 411 1.3E-5 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 Gene3D G3DSA:1.10.287.130 204 260 1.2E-8 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 PANTHER PTHR24423 1 7 6.1E-20 T 10-11-2016 CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 SMART SM00388 211 269 0.005 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 Pfam PF00672 HAMP domain 140 202 1.3E-7 T 10-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 PANTHER PTHR24423:SF477 151 392 6.1E-20 T 10-11-2016 CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 PANTHER PTHR24423:SF477 1 7 6.1E-20 T 10-11-2016 CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 SUPERFAMILY SSF55874 276 400 3.8E-15 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 394 1.4E-6 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 Gene3D G3DSA:3.30.565.10 282 394 2.8E-12 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06385 cd54650c300bdefef741d0498f61ec41 415 SUPERFAMILY SSF47384 196 268 9.02E-9 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS08275 d972f7a7b782705090492f2faad880d5 116 PANTHER PTHR30204:SF2 1 93 5.3E-16 T 10-11-2016 CJM129_RS08275 d972f7a7b782705090492f2faad880d5 116 SUPERFAMILY SSF46955 1 95 8.7E-14 T 10-11-2016 IPR009061 Putative DNA-binding domain CJM129_RS08275 d972f7a7b782705090492f2faad880d5 116 PANTHER PTHR30204 1 93 5.3E-16 T 10-11-2016 CJM129_RS08275 d972f7a7b782705090492f2faad880d5 116 Gene3D G3DSA:1.10.1660.10 1 95 1.3E-15 T 10-11-2016 CJM129_RS02005 759660c4f2cc010a645627d670cf0464 120 SUPERFAMILY SSF54197 2 115 8.08E-22 T 10-11-2016 IPR011146 HIT-like domain GO:0003824 CJM129_RS02005 759660c4f2cc010a645627d670cf0464 120 Gene3D G3DSA:3.30.428.10 2 115 2.7E-21 T 10-11-2016 IPR011146 HIT-like domain GO:0003824 CJM129_RS02005 759660c4f2cc010a645627d670cf0464 120 Pfam PF01230 HIT domain 2 83 3.3E-5 T 10-11-2016 IPR001310 Histidine triad (HIT) protein CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 Pfam PF09190 DALR domain 342 396 5.6E-6 T 10-11-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 SUPERFAMILY SSF52374 11 303 1.64E-73 T 10-11-2016 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 SUPERFAMILY SSF47323 326 459 6.8E-28 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 459 5.0E-145 T 10-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 21 32 5.4E-24 T 10-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 57 66 5.4E-24 T 10-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 212 233 5.4E-24 T 10-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 181 199 5.4E-24 T 10-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 Gene3D G3DSA:3.40.50.620 15 295 1.5E-81 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 460 33.175 T 10-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 PANTHER PTHR10890 2 461 6.6E-152 T 10-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 303 4.5E-108 T 10-11-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CJM129_RS03890 12b9850dc9be4d5f7c0ace042828d4d9 462 Gene3D G3DSA:1.20.120.640 299 393 1.6E-9 T 10-11-2016 CJM129_RS05680 55baa976722c6721de59cc79025c0959 228 PIRSF PIRSF001435 5 220 1.8E-40 T 10-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CJM129_RS05680 55baa976722c6721de59cc79025c0959 228 PANTHER PTHR10359:SF17 10 209 1.5E-38 T 10-11-2016 CJM129_RS05680 55baa976722c6721de59cc79025c0959 228 SUPERFAMILY SSF48150 13 204 1.13E-42 T 10-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CJM129_RS05680 55baa976722c6721de59cc79025c0959 228 Gene3D G3DSA:1.10.340.30 29 124 9.9E-32 T 10-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CJM129_RS05680 55baa976722c6721de59cc79025c0959 228 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 149 1.7E-10 T 10-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CJM129_RS05680 55baa976722c6721de59cc79025c0959 228 SMART SM00478 39 206 3.7E-12 T 10-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CJM129_RS05680 55baa976722c6721de59cc79025c0959 228 Gene3D G3DSA:1.10.1670.10 125 211 1.7E-33 T 10-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CJM129_RS05680 55baa976722c6721de59cc79025c0959 228 PANTHER PTHR10359 10 209 1.5E-38 T 10-11-2016 CJM129_RS08260 b7ac2a942a711af2e66e926cf5132c4d 105 SUPERFAMILY SSF46785 3 88 5.09E-23 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS08260 b7ac2a942a711af2e66e926cf5132c4d 105 SMART SM00418 6 84 3.2E-21 T 10-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJM129_RS08260 b7ac2a942a711af2e66e926cf5132c4d 105 PANTHER PTHR33154 7 96 2.8E-18 T 10-11-2016 CJM129_RS08260 b7ac2a942a711af2e66e926cf5132c4d 105 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 1.9E-14 T 10-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJM129_RS08260 b7ac2a942a711af2e66e926cf5132c4d 105 Gene3D G3DSA:1.10.10.10 2 82 1.7E-24 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS08260 b7ac2a942a711af2e66e926cf5132c4d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.6E-16 T 10-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJM129_RS08260 b7ac2a942a711af2e66e926cf5132c4d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.6E-16 T 10-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJM129_RS08260 b7ac2a942a711af2e66e926cf5132c4d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.6E-16 T 10-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJM129_RS08260 b7ac2a942a711af2e66e926cf5132c4d 105 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.6E-16 T 10-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 214 715 4.6E-158 T 10-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 PANTHER PTHR11252 1 188 2.3E-264 T 10-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 SMART SM00322 572 638 1.2E-7 T 10-11-2016 IPR004087 K Homology domain GO:0003676 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 SMART SM00316 656 718 1.4E-10 T 10-11-2016 IPR022967 RNA-binding domain, S1 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 PANTHER PTHR11252:SF0 216 689 2.3E-264 T 10-11-2016 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 PANTHER PTHR11252:SF0 1 188 2.3E-264 T 10-11-2016 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Gene3D G3DSA:3.30.230.70 336 564 7.1E-80 T 10-11-2016 IPR027408 PNPase/RNase PH domain CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Gene3D G3DSA:3.30.230.70 2 247 8.7E-75 T 10-11-2016 IPR027408 PNPase/RNase PH domain CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Gene3D G3DSA:2.40.50.140 645 715 7.2E-11 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 SUPERFAMILY SSF55666 141 251 1.33E-21 T 10-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Pfam PF00013 KH domain 578 634 2.0E-9 T 10-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 SUPERFAMILY SSF50249 647 715 6.94E-10 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 SUPERFAMILY SSF55666 471 565 6.94E-27 T 10-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Gene3D G3DSA:1.10.10.400 255 335 1.0E-17 T 10-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Pfam PF01138 3' exoribonuclease family, domain 1 344 477 3.2E-20 T 10-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Pfam PF01138 3' exoribonuclease family, domain 1 19 139 5.0E-15 T 10-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 SUPERFAMILY SSF54211 4 139 2.63E-40 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 SUPERFAMILY SSF54791 576 676 6.72E-14 T 10-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Pfam PF00575 S1 RNA binding domain 656 716 2.1E-7 T 10-11-2016 IPR003029 S1 domain GO:0003676 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 PIRSF PIRSF005499 1 719 7.8E-277 T 10-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Gene3D G3DSA:3.30.1370.10 573 640 2.9E-16 T 10-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 PANTHER PTHR11252 216 689 2.3E-264 T 10-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 SUPERFAMILY SSF54211 313 508 5.06E-46 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 719 26.901 T 10-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 265 341 2.2E-11 T 10-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Pfam PF03725 3' exoribonuclease family, domain 2 142 233 1.9E-16 T 10-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CJM129_RS06520 6d691d44cfda626de5b02324d48329c8 719 Pfam PF03725 3' exoribonuclease family, domain 2 481 550 3.5E-7 T 10-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 Gene3D G3DSA:3.40.50.1100 94 173 8.9E-17 T 10-11-2016 CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 386 49.116 T 10-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 SUPERFAMILY SSF53686 3 384 4.71E-137 T 10-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 Gene3D G3DSA:3.40.50.1100 174 387 3.6E-80 T 10-11-2016 CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 PANTHER PTHR10314:SF3 4 384 5.4E-202 T 10-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 48 373 4.4E-54 T 10-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 PIRSF PIRSF001413 1 391 4.9E-178 T 10-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 PANTHER PTHR10314 4 384 5.4E-202 T 10-11-2016 CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 4 385 2.2E-193 T 10-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CJM129_RS01660 5237ed5d20064dcc36349ec25ba46da0 392 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 77 91 - T 10-11-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CJM129_RS02810 176f849dab06fbae35852e9bd2e60719 156 PRINTS PR00502 NUDIX hydrolase family signature 52 67 1.6E-5 T 10-11-2016 IPR020476 NUDIX hydrolase CJM129_RS02810 176f849dab06fbae35852e9bd2e60719 156 PRINTS PR00502 NUDIX hydrolase family signature 38 52 1.6E-5 T 10-11-2016 IPR020476 NUDIX hydrolase CJM129_RS02810 176f849dab06fbae35852e9bd2e60719 156 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 155 29.781 T 10-11-2016 IPR022927 RNA pyrophosphohydrolase RppH CJM129_RS02810 176f849dab06fbae35852e9bd2e60719 156 PANTHER PTHR11839 6 150 1.4E-27 T 10-11-2016 CJM129_RS02810 176f849dab06fbae35852e9bd2e60719 156 SUPERFAMILY SSF55811 5 150 6.36E-24 T 10-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJM129_RS02810 176f849dab06fbae35852e9bd2e60719 156 PANTHER PTHR11839:SF13 6 150 1.4E-27 T 10-11-2016 CJM129_RS02810 176f849dab06fbae35852e9bd2e60719 156 Gene3D G3DSA:3.90.79.10 3 150 8.3E-25 T 10-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJM129_RS02810 176f849dab06fbae35852e9bd2e60719 156 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 10-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CJM129_RS02810 176f849dab06fbae35852e9bd2e60719 156 Pfam PF00293 NUDIX domain 7 143 9.7E-20 T 10-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 CJM129_RS08540 ab44eddffe415b16f28fefc13e000ede 258 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS08540 ab44eddffe415b16f28fefc13e000ede 258 Gene3D G3DSA:3.40.50.300 1 236 5.2E-61 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08540 ab44eddffe415b16f28fefc13e000ede 258 SMART SM00382 26 215 1.7E-17 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS08540 ab44eddffe415b16f28fefc13e000ede 258 Pfam PF00005 ABC transporter 17 167 5.6E-32 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS08540 ab44eddffe415b16f28fefc13e000ede 258 PANTHER PTHR24220 3 243 3.4E-80 T 10-11-2016 CJM129_RS08540 ab44eddffe415b16f28fefc13e000ede 258 SUPERFAMILY SSF52540 2 229 2.02E-57 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08540 ab44eddffe415b16f28fefc13e000ede 258 PANTHER PTHR24220:SF73 3 243 3.4E-80 T 10-11-2016 CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 SMART SM00245 182 370 1.5E-78 T 10-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 Pfam PF13180 PDZ domain 109 189 4.9E-16 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 67 379 2.4E-108 T 10-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 Gene3D G3DSA:3.30.750.44 74 114 5.1E-5 T 10-11-2016 CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 Pfam PF03572 Peptidase family S41 208 369 7.2E-53 T 10-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 SMART SM00228 109 180 1.2E-16 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 SUPERFAMILY SSF50156 106 206 7.72E-26 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 Gene3D G3DSA:3.90.226.10 417 436 2.8E-64 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 Gene3D G3DSA:3.90.226.10 192 372 2.8E-64 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 PANTHER PTHR32060 56 441 3.9E-105 T 10-11-2016 CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 SUPERFAMILY SSF52096 50 127 3.81E-72 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 SUPERFAMILY SSF52096 202 374 3.81E-72 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS02455 fcd312091046198b8db9ba87a724283e 444 Gene3D G3DSA:2.30.42.10 115 191 7.2E-30 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS04560 fdf79131477c005f783ff1a3e1ca702a 261 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 154 7.4E-21 T 10-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CJM129_RS04560 fdf79131477c005f783ff1a3e1ca702a 261 Gene3D G3DSA:1.10.3720.10 56 260 1.6E-48 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04560 fdf79131477c005f783ff1a3e1ca702a 261 PANTHER PTHR30614 22 258 9.9E-73 T 10-11-2016 CJM129_RS04560 fdf79131477c005f783ff1a3e1ca702a 261 SUPERFAMILY SSF161098 59 245 1.83E-45 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04560 fdf79131477c005f783ff1a3e1ca702a 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 258 8.0E-26 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS06145 e82f0deec838b27e51e61c7146390104 255 PANTHER PTHR30065 1 255 1.5E-51 T 10-11-2016 CJM129_RS06145 e82f0deec838b27e51e61c7146390104 255 PANTHER PTHR30065:SF1 1 255 1.5E-51 T 10-11-2016 CJM129_RS06145 e82f0deec838b27e51e61c7146390104 255 Pfam PF01311 Bacterial export proteins, family 1 13 243 1.1E-57 T 10-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJM129_RS06145 e82f0deec838b27e51e61c7146390104 255 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 253 1.5E-75 T 10-11-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CJM129_RS06145 e82f0deec838b27e51e61c7146390104 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 3.1E-22 T 10-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJM129_RS06145 e82f0deec838b27e51e61c7146390104 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 3.1E-22 T 10-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJM129_RS06145 e82f0deec838b27e51e61c7146390104 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 178 200 3.1E-22 T 10-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJM129_RS06145 e82f0deec838b27e51e61c7146390104 255 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 200 219 3.1E-22 T 10-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 Gene3D G3DSA:3.40.140.20 233 345 4.5E-35 T 10-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 PANTHER PTHR11692:SF2 1 510 1.2E-227 T 10-11-2016 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 131 441 2.8E-94 T 10-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 SMART SM00798 131 442 5.9E-146 T 10-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 510 2.4E-163 T 10-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 Gene3D G3DSA:3.40.50.1380 2 182 1.0E-74 T 10-11-2016 IPR011607 Methylglyoxal synthase-like domain CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 PANTHER PTHR11692 1 510 1.2E-227 T 10-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 SUPERFAMILY SSF53927 203 510 4.61E-107 T 10-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 PIRSF PIRSF000414 1 510 1.8E-196 T 10-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 510 38.889 T 10-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 SUPERFAMILY SSF52335 2 190 3.36E-63 T 10-11-2016 IPR011607 Methylglyoxal synthase-like domain CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 SMART SM00851 12 126 8.7E-48 T 10-11-2016 IPR011607 Methylglyoxal synthase-like domain CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 Pfam PF02142 MGS-like domain 12 125 1.2E-22 T 10-11-2016 IPR011607 Methylglyoxal synthase-like domain CJM129_RS04625 248b4d7cd4d3f785478248973ec248f2 510 Gene3D G3DSA:3.40.140.20 356 500 4.7E-49 T 10-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 CJM129_RS04445 a35c8abe041b6845078f204a0feeda02 242 PIRSF PIRSF039085 1 241 2.6E-100 T 10-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CJM129_RS04445 a35c8abe041b6845078f204a0feeda02 242 SUPERFAMILY SSF52540 1 234 5.74E-77 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04445 a35c8abe041b6845078f204a0feeda02 242 Gene3D G3DSA:3.40.50.300 1 236 6.3E-81 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04445 a35c8abe041b6845078f204a0feeda02 242 PANTHER PTHR24220:SF474 3 240 1.4E-134 T 10-11-2016 CJM129_RS04445 a35c8abe041b6845078f204a0feeda02 242 Pfam PF00005 ABC transporter 17 164 1.1E-33 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS04445 a35c8abe041b6845078f204a0feeda02 242 PANTHER PTHR24220 3 240 1.4E-134 T 10-11-2016 CJM129_RS04445 a35c8abe041b6845078f204a0feeda02 242 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS04445 a35c8abe041b6845078f204a0feeda02 242 SMART SM00382 26 213 1.1E-11 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS07255 cb8e7593095e099522331745310b38a4 312 Pfam PF01032 FecCD transport family 30 308 4.4E-44 T 10-11-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CJM129_RS07255 cb8e7593095e099522331745310b38a4 312 PANTHER PTHR30472:SF19 15 312 4.7E-106 T 10-11-2016 CJM129_RS07255 cb8e7593095e099522331745310b38a4 312 Gene3D G3DSA:1.10.3470.10 28 311 2.8E-48 T 10-11-2016 IPR029022 ABC transporter, BtuC-like CJM129_RS07255 cb8e7593095e099522331745310b38a4 312 SUPERFAMILY SSF81345 4 308 7.85E-50 T 10-11-2016 IPR029022 ABC transporter, BtuC-like CJM129_RS07255 cb8e7593095e099522331745310b38a4 312 PANTHER PTHR30472 15 312 4.7E-106 T 10-11-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CJM129_RS05995 5aada2ef227e703905f0acb6883339f1 186 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 186 39.017 T 10-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 CJM129_RS05995 5aada2ef227e703905f0acb6883339f1 186 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 31 182 3.9E-71 T 10-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 CJM129_RS05995 5aada2ef227e703905f0acb6883339f1 186 PANTHER PTHR30390 1 185 1.4E-83 T 10-11-2016 CJM129_RS05995 5aada2ef227e703905f0acb6883339f1 186 SUPERFAMILY SSF53697 8 183 1.02E-53 T 10-11-2016 CJM129_RS05995 5aada2ef227e703905f0acb6883339f1 186 PANTHER PTHR30390:SF6 1 185 1.4E-83 T 10-11-2016 CJM129_RS05995 5aada2ef227e703905f0acb6883339f1 186 Pfam PF13580 SIS domain 11 142 8.7E-30 T 10-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CJM129_RS05995 5aada2ef227e703905f0acb6883339f1 186 Gene3D G3DSA:3.40.50.10490 3 184 2.1E-62 T 10-11-2016 CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 Pfam PF16193 AAA C-terminal domain 161 233 2.4E-10 T 10-11-2016 IPR032423 AAA ATPase, C-terminal domain CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 PANTHER PTHR13779:SF32 1 392 4.7E-112 T 10-11-2016 CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 Gene3D G3DSA:3.40.50.300 5 135 1.6E-24 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 SMART SM00382 33 155 3.8E-9 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 SUPERFAMILY SSF48019 219 391 3.17E-56 T 10-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 SUPERFAMILY SSF52540 3 195 3.24E-33 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 Pfam PF12002 MgsA AAA+ ATPase C terminal 234 388 4.9E-55 T 10-11-2016 IPR021886 MgsA AAA+ ATPase C-terminal CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 120 2.3E-15 T 10-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 Gene3D G3DSA:1.10.3710.10 315 381 2.3E-17 T 10-11-2016 CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 Gene3D G3DSA:1.10.8.60 136 205 1.8E-6 T 10-11-2016 CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 Gene3D G3DSA:1.20.272.10 217 313 2.3E-40 T 10-11-2016 CJM129_RS01000 c4b7a1a4d3111f8c8eb82b0346de8058 393 PANTHER PTHR13779 1 392 4.7E-112 T 10-11-2016 CJM129_RS04760 ec4186af7e0613d88ec33c0273527778 175 PANTHER PTHR12302:SF0 45 174 5.2E-37 T 10-11-2016 CJM129_RS04760 ec4186af7e0613d88ec33c0273527778 175 Pfam PF00565 Staphylococcal nuclease homologue 67 160 1.4E-21 T 10-11-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJM129_RS04760 ec4186af7e0613d88ec33c0273527778 175 SMART SM00318 42 160 2.0E-34 T 10-11-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJM129_RS04760 ec4186af7e0613d88ec33c0273527778 175 Gene3D G3DSA:2.40.50.90 40 165 1.0E-32 T 10-11-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJM129_RS04760 ec4186af7e0613d88ec33c0273527778 175 SUPERFAMILY SSF50199 39 166 1.7E-36 T 10-11-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJM129_RS04760 ec4186af7e0613d88ec33c0273527778 175 PANTHER PTHR12302 45 174 5.2E-37 T 10-11-2016 CJM129_RS03405 b80cbcc636e5e9f60b27a629b09f6329 241 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 225 5.6E-62 T 10-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CJM129_RS03405 b80cbcc636e5e9f60b27a629b09f6329 241 PANTHER PTHR13799:SF13 1 241 1.8E-51 T 10-11-2016 CJM129_RS03405 b80cbcc636e5e9f60b27a629b09f6329 241 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 238 2.2E-51 T 10-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CJM129_RS03405 b80cbcc636e5e9f60b27a629b09f6329 241 Gene3D G3DSA:3.40.1390.30 1 104 4.6E-32 T 10-11-2016 CJM129_RS03405 b80cbcc636e5e9f60b27a629b09f6329 241 Gene3D G3DSA:3.40.1390.30 125 206 1.3E-22 T 10-11-2016 CJM129_RS03405 b80cbcc636e5e9f60b27a629b09f6329 241 SUPERFAMILY SSF102705 1 240 2.49E-69 T 10-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CJM129_RS03405 b80cbcc636e5e9f60b27a629b09f6329 241 PANTHER PTHR13799 1 241 1.8E-51 T 10-11-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 PANTHER PTHR11540 1 292 1.4E-65 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 Gene3D G3DSA:3.90.110.10 143 292 6.7E-36 T 10-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 145 291 1.9E-16 T 10-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 PANTHER PTHR11540:SF16 1 292 1.4E-65 T 10-11-2016 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 Gene3D G3DSA:3.40.50.720 1 142 1.5E-35 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 140 1.3E-31 T 10-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 2.6E-23 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 PRINTS PR00086 L-lactate dehydrogenase signature 115 135 2.6E-23 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 2.6E-23 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 PRINTS PR00086 L-lactate dehydrogenase signature 169 182 2.6E-23 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 PRINTS PR00086 L-lactate dehydrogenase signature 139 157 2.6E-23 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 SUPERFAMILY SSF51735 1 141 4.22E-37 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 PIRSF PIRSF000102 1 300 2.8E-82 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS02545 3baa1104426a728d6a2939552bff6165 300 SUPERFAMILY SSF56327 144 292 3.58E-33 T 10-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 41.875 T 10-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 Pfam PF14698 Argininosuccinate lyase C-terminal 367 431 1.7E-16 T 10-11-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PANTHER PTHR11444 3 457 2.2E-216 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS04490 1783171a51067f5261410adc847e7114 460 SUPERFAMILY SSF48557 8 459 4.56E-135 T 10-11-2016 IPR008948 L-Aspartase-like GO:0003824 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 9.3E-23 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00149 Fumarate lyase superfamily signature 278 294 9.3E-23 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 9.3E-23 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00149 Fumarate lyase superfamily signature 234 261 9.3E-23 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS04490 1783171a51067f5261410adc847e7114 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 453 2.2E-176 T 10-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 Gene3D G3DSA:1.20.200.10 110 376 4.9E-91 T 10-11-2016 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 ProSitePatterns PS00163 Fumarate lyases signature. 278 287 - T 10-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 1.5E-57 T 10-11-2016 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00145 Argininosuccinate lyase family signature 234 258 1.5E-57 T 10-11-2016 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 1.5E-57 T 10-11-2016 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 1.5E-57 T 10-11-2016 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00145 Argininosuccinate lyase family signature 278 294 1.5E-57 T 10-11-2016 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 1.5E-57 T 10-11-2016 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 Pfam PF00206 Lyase 8 303 6.3E-75 T 10-11-2016 IPR022761 Fumarate lyase, N-terminal CJM129_RS04490 1783171a51067f5261410adc847e7114 460 Gene3D G3DSA:1.10.40.30 377 433 1.1E-21 T 10-11-2016 CJM129_RS04490 1783171a51067f5261410adc847e7114 460 Gene3D G3DSA:1.10.275.10 4 109 1.5E-40 T 10-11-2016 IPR024083 Fumarase/histidase, N-terminal CJM129_RS04490 1783171a51067f5261410adc847e7114 460 PANTHER PTHR11444:SF3 3 457 2.2E-216 T 10-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 PANTHER PTHR13370 125 248 2.7E-16 T 10-11-2016 CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 SUPERFAMILY SSF53335 7 37 1.09E-43 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 SUPERFAMILY SSF53335 65 239 1.09E-43 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 PANTHER PTHR13370:SF7 125 248 2.7E-16 T 10-11-2016 CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 Pfam PF01555 DNA methylase 173 239 1.7E-19 T 10-11-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 Gene3D G3DSA:3.40.50.150 19 240 8.8E-39 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 180 197 8.6E-17 T 10-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 199 217 8.6E-17 T 10-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 222 242 8.6E-17 T 10-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJM129_RS06680 6758d0a3a3d4359f5dc9f4c85b714585 251 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 21 35 8.6E-17 T 10-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 SUPERFAMILY SSF118215 23 433 9.42E-92 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 PANTHER PTHR11958 1 448 2.3E-148 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 Pfam PF00375 Sodium:dicarboxylate symporter family 23 432 2.6E-95 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 Gene3D G3DSA:1.10.3860.10 21 438 3.5E-96 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 PRINTS PR00173 Glutamate-aspartate symporter signature 346 365 7.0E-28 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 PRINTS PR00173 Glutamate-aspartate symporter signature 88 113 7.0E-28 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 7.0E-28 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 PRINTS PR00173 Glutamate-aspartate symporter signature 311 337 7.0E-28 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 PRINTS PR00173 Glutamate-aspartate symporter signature 58 78 7.0E-28 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 PRINTS PR00173 Glutamate-aspartate symporter signature 211 230 7.0E-28 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06210 3a58a9566792510a099a81d398cad672 458 PANTHER PTHR11958:SF49 1 448 2.3E-148 T 10-11-2016 CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 Gene3D G3DSA:1.10.1670.10 139 225 2.0E-29 T 10-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 PANTHER PTHR10359 1 220 2.2E-70 T 10-11-2016 CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 183 1.3E-19 T 10-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 8 274 3.3E-108 T 10-11-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 Gene3D G3DSA:1.10.340.30 42 138 2.5E-35 T 10-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 SMART SM00478 54 201 4.5E-44 T 10-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 ProSitePatterns PS01155 Endonuclease III family signature. 118 147 - T 10-11-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 Pfam PF00633 Helix-hairpin-helix motif 116 144 5.6E-6 T 10-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 SUPERFAMILY SSF48150 7 224 2.51E-60 T 10-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CJM129_RS08560 c3a866bdaafec4ceb4bf18f4ecf8c594 339 PANTHER PTHR10359:SF1 1 220 2.2E-70 T 10-11-2016 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 SUPERFAMILY SSF57938 135 209 1.7E-15 T 10-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 370 35.191 T 10-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 Pfam PF00684 DnaJ central domain 148 206 7.6E-12 T 10-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 Pfam PF01556 DnaJ C terminal domain 123 332 5.0E-34 T 10-11-2016 IPR002939 Chaperone DnaJ, C-terminal CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 SMART SM00271 3 61 2.0E-30 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 PANTHER PTHR24078:SF190 5 348 6.2E-122 T 10-11-2016 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 PRINTS PR00625 DnaJ domain signature 41 61 1.3E-28 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 PRINTS PR00625 DnaJ domain signature 61 80 1.3E-28 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 PRINTS PR00625 DnaJ domain signature 24 39 1.3E-28 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 PRINTS PR00625 DnaJ domain signature 6 24 1.3E-28 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 Gene3D G3DSA:1.10.287.110 4 103 1.4E-34 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 Gene3D G3DSA:2.60.260.20 213 250 3.5E-13 T 10-11-2016 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 Gene3D G3DSA:2.60.260.20 119 144 3.5E-13 T 10-11-2016 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 Gene3D G3DSA:2.60.260.20 256 333 4.5E-16 T 10-11-2016 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 348 1.3E-127 T 10-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 Pfam PF00226 DnaJ domain 5 66 8.6E-28 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 SUPERFAMILY SSF46565 3 104 4.58E-33 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 SUPERFAMILY SSF49493 213 250 2.62E-14 T 10-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 SUPERFAMILY SSF49493 119 153 2.62E-14 T 10-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 SUPERFAMILY SSF49493 258 343 2.35E-19 T 10-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 PANTHER PTHR24078 5 348 6.2E-122 T 10-11-2016 CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 10-11-2016 IPR018253 DnaJ domain, conserved site CJM129_RS06550 f2af62bbb938def880f26213f7a4d794 373 Gene3D G3DSA:2.10.230.10 145 209 5.1E-17 T 10-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 442 28.607 T 10-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 442 1.7E-108 T 10-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Gene3D G3DSA:3.30.1360.120 2 119 7.4E-40 T 10-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 SUPERFAMILY SSF103025 3 118 2.2E-37 T 10-11-2016 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Gene3D G3DSA:3.40.50.300 288 365 2.8E-7 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 118 4.6E-34 T 10-11-2016 IPR018948 GTP-binding protein TrmE, N-terminal CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Gene3D G3DSA:1.20.120.430 126 180 1.3E-37 T 10-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Gene3D G3DSA:1.20.120.430 246 269 1.3E-37 T 10-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Gene3D G3DSA:1.20.120.430 373 442 1.3E-37 T 10-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Gene3D G3DSA:3.40.50.300 209 245 3.7E-7 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Pfam PF01926 50S ribosome-binding GTPase 216 331 7.8E-25 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 PANTHER PTHR11649 6 442 4.3E-106 T 10-11-2016 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 SUPERFAMILY SSF52540 71 161 9.03E-36 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 SUPERFAMILY SSF52540 195 349 9.03E-36 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 357 4.5E-28 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 Pfam PF12631 MnmE helical domain 127 439 3.0E-31 T 10-11-2016 IPR025867 MnmE, helical domain CJM129_RS04640 4afa112287d4fa7f8de444143decf8f9 442 PANTHER PTHR11649:SF56 6 442 4.3E-106 T 10-11-2016 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2 615 4.8E-257 T 10-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 PANTHER PTHR11806:SF0 1 618 0.0 T 10-11-2016 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 Pfam PF13932 GidA associated domain 395 608 1.2E-58 T 10-11-2016 IPR026904 GidA associated domain 3 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 SMART SM01228 539 610 6.1E-36 T 10-11-2016 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 Pfam PF01134 Glucose inhibited division protein A 3 392 5.6E-160 T 10-11-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 Gene3D G3DSA:3.50.50.60 2 224 7.4E-35 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 267 281 - T 10-11-2016 IPR020595 MnmG-related, conserved site CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 PANTHER PTHR11806 1 618 0.0 T 10-11-2016 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 362 385 - T 10-11-2016 IPR020595 MnmG-related, conserved site CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 1 617 38.688 T 10-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 SUPERFAMILY SSF51905 92 253 4.33E-40 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS06190 54ade7b37f60532fc6b32229a69ffaec 619 SUPERFAMILY SSF51905 1 61 4.33E-40 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 Gene3D G3DSA:2.70.150.10 156 308 1.9E-19 T 10-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 409 415 - T 10-11-2016 IPR018303 P-type ATPase, phosphorylation site CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 179 682 4.7E-98 T 10-11-2016 IPR001757 P-type ATPase GO:0016021 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 PANTHER PTHR24093:SF50 1 699 9.0E-161 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 SUPERFAMILY SSF81653 213 308 3.01E-17 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 SUPERFAMILY SSF56784 407 694 1.82E-41 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 144 696 3.1E-141 T 10-11-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 Pfam PF00122 E1-E2 ATPase 178 398 4.2E-55 T 10-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 Gene3D G3DSA:3.30.70.100 1 66 8.4E-15 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 Gene3D G3DSA:3.40.50.1000 380 423 6.6E-39 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 Gene3D G3DSA:3.40.50.1000 514 659 6.6E-39 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 Pfam PF00702 haloacid dehalogenase-like hydrolase 404 603 2.0E-26 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 PANTHER PTHR24093 1 699 9.0E-161 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 551 6.4E-15 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 590 609 6.4E-15 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 407 421 6.4E-15 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 258 272 6.4E-15 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 625 6.4E-15 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 SUPERFAMILY SSF81665 309 401 4.84E-13 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 SUPERFAMILY SSF81665 175 207 4.84E-13 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 SUPERFAMILY SSF81665 639 690 4.84E-13 T 10-11-2016 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 SUPERFAMILY SSF55008 1 67 1.1E-12 T 10-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 Pfam PF00403 Heavy-metal-associated domain 6 65 4.3E-10 T 10-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CJM129_RS06055 b07eb3f69c5113bed18c99e6ac2b59ab 699 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 126 697 1.0E-140 T 10-11-2016 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 156 314 1.5E-24 T 10-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 PANTHER PTHR32338:SF8 2 340 2.8E-170 T 10-11-2016 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 SUPERFAMILY SSF55347 147 310 1.31E-55 T 10-11-2016 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 339 9.9E-139 T 10-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 PANTHER PTHR32338 2 340 2.8E-170 T 10-11-2016 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 337 42.796 T 10-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 Gene3D G3DSA:3.30.360.10 156 311 4.5E-62 T 10-11-2016 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 SMART SM00859 4 139 7.7E-50 T 10-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 139 3.1E-30 T 10-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 SUPERFAMILY SSF51735 2 174 4.1E-49 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 Gene3D G3DSA:3.40.50.720 1 155 1.1E-56 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS01085 1e33c5cee70e3ffad06d172a514830f1 342 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 142 158 - T 10-11-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS01330 c9ac629494a2f28441697e29dc494a50 249 Pfam PF04085 rod shape-determining protein MreC 154 246 4.4E-15 T 10-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 3.9E-6 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 3.9E-6 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 Hamap MF_00195 GTPase Der [der]. 1 453 32.557 T 10-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 SUPERFAMILY SSF52540 175 451 2.35E-51 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 Pfam PF01926 50S ribosome-binding GTPase 197 314 5.1E-22 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 Pfam PF01926 50S ribosome-binding GTPase 4 117 7.8E-23 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 Gene3D G3DSA:3.30.300.20 376 452 8.1E-30 T 10-11-2016 IPR015946 K homology domain-like, alpha/beta CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 Gene3D G3DSA:3.40.50.300 4 161 3.9E-39 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 PANTHER PTHR11649 4 450 1.9E-68 T 10-11-2016 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 Gene3D G3DSA:3.40.50.300 192 375 4.9E-44 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 370 449 4.7E-27 T 10-11-2016 IPR032859 GTPase Der, C-terminal KH-domain-like CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 PIRSF PIRSF006485 1 458 6.0E-148 T 10-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 194 359 5.1E-26 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 1.7E-27 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 SUPERFAMILY SSF52540 4 172 4.11E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01845 a309fcebe2c1fafe09910a7b731002c0 460 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 448 8.8E-146 T 10-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 CJM129_RS03985 41a4465c582388860c8ce8d756ec8e21 258 PANTHER PTHR30487 1 252 9.5E-26 T 10-11-2016 CJM129_RS03985 41a4465c582388860c8ce8d756ec8e21 258 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 7 87 5.8E-18 T 10-11-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- CJM129_RS03985 41a4465c582388860c8ce8d756ec8e21 258 Pfam PF01478 Type IV leader peptidase family 102 223 1.1E-4 T 10-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CJM129_RS02895 b00643263489e6d7d054b94365eb31c7 480 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 209 8.9E-10 T 10-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CJM129_RS06975 21253f1f586637d929c2ed51c82d3e63 334 PANTHER PTHR10366 6 272 9.5E-116 T 10-11-2016 CJM129_RS06975 21253f1f586637d929c2ed51c82d3e63 334 Gene3D G3DSA:3.40.50.720 5 224 6.4E-45 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06975 21253f1f586637d929c2ed51c82d3e63 334 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 327 1.7E-175 T 10-11-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 CJM129_RS06975 21253f1f586637d929c2ed51c82d3e63 334 PANTHER PTHR10366:SF360 6 272 9.5E-116 T 10-11-2016 CJM129_RS06975 21253f1f586637d929c2ed51c82d3e63 334 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 1.4E-103 T 10-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CJM129_RS06975 21253f1f586637d929c2ed51c82d3e63 334 SUPERFAMILY SSF51735 1 272 8.4E-51 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS01835 2d46aa662dc05a4574b58e9e3459cefe 271 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 2 269 1.0E-119 T 10-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CJM129_RS01835 2d46aa662dc05a4574b58e9e3459cefe 271 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 1 270 51.772 T 10-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CJM129_RS01835 2d46aa662dc05a4574b58e9e3459cefe 271 Pfam PF00793 DAHP synthetase I family 2 268 1.1E-64 T 10-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CJM129_RS01835 2d46aa662dc05a4574b58e9e3459cefe 271 Gene3D G3DSA:3.20.20.70 2 269 7.6E-121 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS01835 2d46aa662dc05a4574b58e9e3459cefe 271 SUPERFAMILY SSF51569 3 269 2.11E-91 T 10-11-2016 CJM129_RS01835 2d46aa662dc05a4574b58e9e3459cefe 271 PANTHER PTHR21057:SF2 2 271 2.2E-139 T 10-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CJM129_RS01835 2d46aa662dc05a4574b58e9e3459cefe 271 PANTHER PTHR21057 2 271 2.2E-139 T 10-11-2016 CJM129_RS00090 9c1f3ab436e183bddf6178afa49ccad6 592 PANTHER PTHR32089 172 586 6.4E-41 T 10-11-2016 CJM129_RS00090 9c1f3ab436e183bddf6178afa49ccad6 592 SUPERFAMILY SSF58104 284 591 3.4E-51 T 10-11-2016 CJM129_RS00090 9c1f3ab436e183bddf6178afa49ccad6 592 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 396 591 4.5E-35 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS00090 9c1f3ab436e183bddf6178afa49ccad6 592 SMART SM00283 331 592 1.0E-30 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS00090 9c1f3ab436e183bddf6178afa49ccad6 592 PANTHER PTHR32089:SF1 172 586 6.4E-41 T 10-11-2016 CJM129_RS00090 9c1f3ab436e183bddf6178afa49ccad6 592 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 458 487 4.0E-17 T 10-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJM129_RS00090 9c1f3ab436e183bddf6178afa49ccad6 592 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 156 171 4.0E-17 T 10-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJM129_RS00090 9c1f3ab436e183bddf6178afa49ccad6 592 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 429 456 4.0E-17 T 10-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJM129_RS00090 9c1f3ab436e183bddf6178afa49ccad6 592 Gene3D G3DSA:1.10.287.950 346 546 9.6E-41 T 10-11-2016 CJM129_RS06370 f872b08dbd6d52ce84a92f9d4686631b 199 SUPERFAMILY SSF47188 3 125 8.11E-32 T 10-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CJM129_RS06370 f872b08dbd6d52ce84a92f9d4686631b 199 Gene3D G3DSA:1.20.120.50 2 126 1.6E-33 T 10-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CJM129_RS06370 f872b08dbd6d52ce84a92f9d4686631b 199 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 10-11-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 CJM129_RS06370 f872b08dbd6d52ce84a92f9d4686631b 199 Pfam PF01814 Hemerythrin HHE cation binding domain 15 123 2.5E-12 T 10-11-2016 IPR012312 Haemerythrin-like CJM129_RS06370 f872b08dbd6d52ce84a92f9d4686631b 199 PANTHER PTHR37164 1 142 3.2E-20 T 10-11-2016 CJM129_RS06370 f872b08dbd6d52ce84a92f9d4686631b 199 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 126 2.2E-32 T 10-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 PANTHER PTHR11632 1 114 6.5E-241 T 10-11-2016 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 SUPERFAMILY SSF51905 378 439 1.06E-59 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 SUPERFAMILY SSF51905 6 274 1.06E-59 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 SUPERFAMILY SSF56425 251 374 2.39E-36 T 10-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 Gene3D G3DSA:3.50.50.60 370 436 7.1E-90 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 Gene3D G3DSA:3.50.50.60 5 257 7.1E-90 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 Gene3D G3DSA:1.20.58.100 444 554 2.0E-35 T 10-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 602 7.4E-219 T 10-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 PANTHER PTHR11632:SF5 1 114 6.5E-241 T 10-11-2016 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 PANTHER PTHR11632:SF5 136 594 6.5E-241 T 10-11-2016 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 Gene3D G3DSA:4.10.80.40 555 602 5.5E-11 T 10-11-2016 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 PANTHER PTHR11632 136 594 6.5E-241 T 10-11-2016 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 Pfam PF02910 Fumarate reductase flavoprotein C-term 473 602 5.7E-37 T 10-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 Gene3D G3DSA:3.90.700.10 258 360 1.2E-34 T 10-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 Pfam PF00890 FAD binding domain 7 414 5.3E-118 T 10-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 PIRSF PIRSF000171 1 589 2.7E-30 T 10-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit CJM129_RS01960 43d6d23a1ee6327e44a3d2ad456e7b51 663 SUPERFAMILY SSF46977 463 658 4.19E-59 T 10-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CJM129_RS05670 d98ad6d44ca9b40e41c2f9ca4e892ac0 210 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 8 199 2.4E-67 T 10-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CJM129_RS05670 d98ad6d44ca9b40e41c2f9ca4e892ac0 210 Pfam PF02581 Thiamine monophosphate synthase/TENI 9 186 2.6E-57 T 10-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CJM129_RS05670 d98ad6d44ca9b40e41c2f9ca4e892ac0 210 SUPERFAMILY SSF51391 5 202 5.49E-55 T 10-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CJM129_RS05670 d98ad6d44ca9b40e41c2f9ca4e892ac0 210 PANTHER PTHR20857:SF15 1 203 6.6E-62 T 10-11-2016 CJM129_RS05670 d98ad6d44ca9b40e41c2f9ca4e892ac0 210 Gene3D G3DSA:3.20.20.70 1 203 1.6E-65 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS05670 d98ad6d44ca9b40e41c2f9ca4e892ac0 210 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 6 204 26.256 T 10-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CJM129_RS05670 d98ad6d44ca9b40e41c2f9ca4e892ac0 210 PANTHER PTHR20857 1 203 6.6E-62 T 10-11-2016 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 670 36.707 T 10-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 SUPERFAMILY SSF56024 309 492 7.85E-52 T 10-11-2016 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 SUPERFAMILY SSF143724 110 298 7.06E-56 T 10-11-2016 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 8 663 6.1E-231 T 10-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 Pfam PF13089 Polyphosphate kinase N-terminal domain 8 111 4.7E-32 T 10-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 SUPERFAMILY SSF56024 495 671 5.76E-57 T 10-11-2016 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 Pfam PF13090 Polyphosphate kinase C-terminal domain 324 663 3.2E-140 T 10-11-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 PIRSF PIRSF015589 1 683 8.8E-264 T 10-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 SUPERFAMILY SSF140356 5 108 2.09E-33 T 10-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 Gene3D G3DSA:3.30.870.10 310 493 3.9E-67 T 10-11-2016 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 Gene3D G3DSA:3.30.1840.10 109 294 8.4E-59 T 10-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 PANTHER PTHR30218 4 690 9.5E-268 T 10-11-2016 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 Pfam PF02503 Polyphosphate kinase middle domain 122 314 3.8E-57 T 10-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 Gene3D G3DSA:3.30.870.10 494 669 1.4E-61 T 10-11-2016 CJM129_RS07290 2679d29e12906b58cf89ea0182c0274c 694 PANTHER PTHR30218:SF0 4 690 9.5E-268 T 10-11-2016 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 Gene3D G3DSA:2.30.42.10 281 370 4.6E-21 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PANTHER PTHR22939 86 368 8.7E-104 T 10-11-2016 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PANTHER PTHR22939 41 62 8.7E-104 T 10-11-2016 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 SMART SM00228 381 464 0.18 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 SMART SM00228 278 358 5.4E-11 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 SUPERFAMILY SSF50156 384 466 7.49E-11 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PANTHER PTHR22939:SF79 86 368 8.7E-104 T 10-11-2016 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 469 1.4E-150 T 10-11-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PANTHER PTHR22939:SF79 41 62 8.7E-104 T 10-11-2016 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 Gene3D G3DSA:2.40.10.10 167 280 3.8E-42 T 10-11-2016 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 Gene3D G3DSA:2.40.10.10 41 166 7.2E-35 T 10-11-2016 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 Gene3D G3DSA:2.30.42.10 384 464 7.3E-14 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 SUPERFAMILY SSF50156 260 364 1.08E-19 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 Pfam PF13180 PDZ domain 404 464 1.4E-6 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 Pfam PF13180 PDZ domain 279 364 6.1E-16 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 SUPERFAMILY SSF50494 40 270 7.57E-64 T 10-11-2016 IPR009003 Peptidase S1, PA clan CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PRINTS PR00834 HtrA/DegQ protease family signature 135 155 6.9E-52 T 10-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PRINTS PR00834 HtrA/DegQ protease family signature 113 125 6.9E-52 T 10-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PRINTS PR00834 HtrA/DegQ protease family signature 210 227 6.9E-52 T 10-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PRINTS PR00834 HtrA/DegQ protease family signature 232 249 6.9E-52 T 10-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PRINTS PR00834 HtrA/DegQ protease family signature 175 199 6.9E-52 T 10-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 PRINTS PR00834 HtrA/DegQ protease family signature 316 328 6.9E-52 T 10-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJM129_RS06395 3d070ffdc05dc5c07916c884651e0055 472 Pfam PF13365 Trypsin-like peptidase domain 104 239 2.6E-32 T 10-11-2016 CJM129_RS06060 77f7650169cf8d80f0b5069a7eb2104b 64 Gene3D G3DSA:3.30.70.100 2 60 3.7E-7 T 10-11-2016 CJM129_RS06060 77f7650169cf8d80f0b5069a7eb2104b 64 SUPERFAMILY SSF55008 2 61 6.02E-8 T 10-11-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CJM129_RS02190 f9b70f8a5f527a8b8a135abfa55a7f6a 253 SMART SM00479 71 233 2.1E-37 T 10-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CJM129_RS02190 f9b70f8a5f527a8b8a135abfa55a7f6a 253 SUPERFAMILY SSF53098 72 250 7.99E-45 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS02190 f9b70f8a5f527a8b8a135abfa55a7f6a 253 PANTHER PTHR30231 35 224 1.8E-31 T 10-11-2016 CJM129_RS02190 f9b70f8a5f527a8b8a135abfa55a7f6a 253 Gene3D G3DSA:3.30.420.10 65 232 2.1E-47 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS02190 f9b70f8a5f527a8b8a135abfa55a7f6a 253 Pfam PF00929 Exonuclease 74 224 2.6E-29 T 10-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CJM129_RS02190 f9b70f8a5f527a8b8a135abfa55a7f6a 253 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 67 231 1.4E-26 T 10-11-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS01780 7621d9d3fcc184b1b96c149938b7d8e5 311 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 10-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJM129_RS01780 7621d9d3fcc184b1b96c149938b7d8e5 311 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 11 310 6.1E-28 T 10-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CJM129_RS01780 7621d9d3fcc184b1b96c149938b7d8e5 311 PANTHER PTHR10996 1 310 1.2E-85 T 10-11-2016 CJM129_RS01780 7621d9d3fcc184b1b96c149938b7d8e5 311 Gene3D G3DSA:3.40.50.720 1 104 3.9E-28 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS01780 7621d9d3fcc184b1b96c149938b7d8e5 311 SUPERFAMILY SSF51735 99 286 1.94E-48 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS01780 7621d9d3fcc184b1b96c149938b7d8e5 311 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 285 2.6E-50 T 10-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJM129_RS01780 7621d9d3fcc184b1b96c149938b7d8e5 311 SUPERFAMILY SSF52283 1 123 1.29E-32 T 10-11-2016 CJM129_RS01780 7621d9d3fcc184b1b96c149938b7d8e5 311 Gene3D G3DSA:3.40.50.720 105 287 2.3E-50 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 133 2.5E-29 T 10-11-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 PIRSF PIRSF500210 1 280 7.9E-91 T 10-11-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 280 29.409 T 10-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 Gene3D G3DSA:3.30.540.10 1 147 2.3E-35 T 10-11-2016 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 PANTHER PTHR11556 4 276 8.2E-75 T 10-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 SUPERFAMILY SSF56655 2 278 2.29E-69 T 10-11-2016 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 53 73 5.7E-14 T 10-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 37 52 5.7E-14 T 10-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 187 207 5.7E-14 T 10-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 251 275 5.7E-14 T 10-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 107 125 5.7E-14 T 10-11-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 PIRSF PIRSF000904 1 280 3.9E-93 T 10-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 CJM129_RS04060 3613f39f4e5861877bb0eddfa4843c1a 280 Gene3D G3DSA:3.40.190.80 152 279 6.1E-41 T 10-11-2016 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 PANTHER PTHR11958:SF5 34 461 9.5E-86 T 10-11-2016 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 Gene3D G3DSA:1.10.3860.10 34 455 1.0E-92 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 PANTHER PTHR11958 34 461 9.5E-86 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 PRINTS PR00173 Glutamate-aspartate symporter signature 339 365 1.2E-7 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 PRINTS PR00173 Glutamate-aspartate symporter signature 265 284 1.2E-7 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 PRINTS PR00173 Glutamate-aspartate symporter signature 402 422 1.2E-7 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 PRINTS PR00173 Glutamate-aspartate symporter signature 239 258 1.2E-7 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 1.2E-7 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 PRINTS PR00173 Glutamate-aspartate symporter signature 124 149 1.2E-7 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 SUPERFAMILY SSF118215 41 449 3.79E-86 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00120 f38f8a4e9907d01f01d6ea52ff27053a 461 Pfam PF00375 Sodium:dicarboxylate symporter family 42 449 1.5E-103 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 664 0.0 T 10-11-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 847 28.589 T 10-11-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 SUPERFAMILY SSF101904 500 660 5.62E-98 T 10-11-2016 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 SUPERFAMILY SSF101904 697 854 5.62E-98 T 10-11-2016 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 PANTHER PTHR10169:SF48 6 676 0.0 T 10-11-2016 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 PANTHER PTHR10169:SF48 713 818 0.0 T 10-11-2016 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Gene3D G3DSA:3.30.1360.40 239 333 1.1E-36 T 10-11-2016 IPR024946 Arginine repressor C-terminal-like domain CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 PANTHER PTHR10169 713 818 0.0 T 10-11-2016 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Gene3D G3DSA:3.90.199.10 335 400 1.5E-118 T 10-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Gene3D G3DSA:3.90.199.10 34 238 1.5E-118 T 10-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 SUPERFAMILY SSF56719 34 488 2.88E-176 T 10-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 747 794 4.9E-12 T 10-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 696 742 2.3E-13 T 10-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 799 843 1.1E-8 T 10-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 551 8.9E-10 T 10-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 4.4E-9 T 10-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 655 5.1E-13 T 10-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Gene3D G3DSA:2.120.10.90 697 839 1.1E-121 T 10-11-2016 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Gene3D G3DSA:2.120.10.90 498 660 1.1E-121 T 10-11-2016 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 PANTHER PTHR10169 6 676 0.0 T 10-11-2016 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 473 1.5E-159 T 10-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS05400 8f05c9935b9d58c895996674142a687b 862 SMART SM00434 14 466 2.9E-287 T 10-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS01015 d88e125d4a4db511864d06e5017473ff 169 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 53 169 1.3E-13 T 10-11-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CJM129_RS01015 d88e125d4a4db511864d06e5017473ff 169 SUPERFAMILY SSF54001 53 169 1.28E-17 T 10-11-2016 CJM129_RS01015 d88e125d4a4db511864d06e5017473ff 169 Gene3D G3DSA:2.30.30.330 52 169 9.3E-21 T 10-11-2016 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 Pfam PF00472 RF-1 domain 228 335 3.6E-41 T 10-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 PANTHER PTHR11075 27 365 7.1E-142 T 10-11-2016 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 Gene3D G3DSA:3.30.160.20 227 304 5.9E-38 T 10-11-2016 IPR014720 Double-stranded RNA-binding domain CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 10-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 Gene3D G3DSA:1.20.58.410 1 114 3.0E-24 T 10-11-2016 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 SMART SM00937 84 194 1.0E-52 T 10-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 361 4.8E-156 T 10-11-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 Pfam PF03462 PCRF domain 30 219 1.9E-55 T 10-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 PANTHER PTHR11075:SF6 27 365 7.1E-142 T 10-11-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 36.876 T 10-11-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 CJM129_RS07755 f44985b8206e3d22fc779908f2d1d6d2 365 SUPERFAMILY SSF75620 29 362 3.66E-124 T 10-11-2016 CJM129_RS03835 bafffa623ab86783f1c69b11748084d5 422 Gene3D G3DSA:3.90.1150.10 285 419 2.6E-31 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS03835 bafffa623ab86783f1c69b11748084d5 422 Gene3D G3DSA:3.40.640.10 35 284 4.3E-43 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS03835 bafffa623ab86783f1c69b11748084d5 422 PANTHER PTHR11601 20 414 3.3E-107 T 10-11-2016 CJM129_RS03835 bafffa623ab86783f1c69b11748084d5 422 Pfam PF00266 Aminotransferase class-V 19 409 1.1E-43 T 10-11-2016 IPR000192 Aminotransferase class V domain CJM129_RS03835 bafffa623ab86783f1c69b11748084d5 422 SUPERFAMILY SSF53383 8 416 2.84E-62 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS03835 bafffa623ab86783f1c69b11748084d5 422 PANTHER PTHR11601:SF24 20 414 3.3E-107 T 10-11-2016 CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 PANTHER PTHR10804 6 176 2.2E-154 T 10-11-2016 CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 PANTHER PTHR10804 277 593 2.2E-154 T 10-11-2016 CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 Pfam PF16188 C-terminal region of peptidase_M24 533 595 1.5E-21 T 10-11-2016 IPR032416 Peptidase M24, C-terminal domain CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 Gene3D G3DSA:3.40.350.10 166 285 5.5E-13 T 10-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 Gene3D G3DSA:3.40.350.10 2 131 3.6E-19 T 10-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 Pfam PF01321 Creatinase/Prolidase N-terminal domain 7 131 5.5E-15 T 10-11-2016 IPR000587 Creatinase, N-terminal GO:0016787 CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 SUPERFAMILY SSF55920 299 559 1.44E-48 T 10-11-2016 IPR000994 Peptidase M24, structural domain CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 SUPERFAMILY SSF53092 173 286 8.55E-5 T 10-11-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 Pfam PF00557 Metallopeptidase family M24 305 521 5.4E-42 T 10-11-2016 IPR000994 Peptidase M24, structural domain CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 Pfam PF16189 Creatinase/Prolidase N-terminal domain 144 301 6.4E-43 T 10-11-2016 CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 Gene3D G3DSA:3.90.230.10 296 560 2.0E-53 T 10-11-2016 IPR000994 Peptidase M24, structural domain CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 SUPERFAMILY SSF53092 4 125 2.96E-14 T 10-11-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 PANTHER PTHR10804:SF87 6 176 2.2E-154 T 10-11-2016 CJM129_RS03160 8b6f24c866ccf6e8564e481b97d7081c 596 PANTHER PTHR10804:SF87 277 593 2.2E-154 T 10-11-2016 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 Pfam PF08245 Mur ligase middle domain 64 256 1.5E-42 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 Gene3D G3DSA:3.40.1190.10 57 281 2.6E-55 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 56 423 1.2E-123 T 10-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 PANTHER PTHR23135 35 426 1.9E-127 T 10-11-2016 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 423 27.057 T 10-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 Pfam PF02875 Mur ligase family, glutamate ligase domain 278 356 9.2E-18 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 SUPERFAMILY SSF53623 57 259 1.19E-55 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 PANTHER PTHR23135:SF4 35 426 1.9E-127 T 10-11-2016 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 SUPERFAMILY SSF53244 278 425 6.56E-41 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 Gene3D G3DSA:3.90.190.20 288 416 6.1E-48 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS08685 73fb3c2651395ec9abf12dfce8973162 427 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 62 85 - T 10-11-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 CJM129_RS02945 6b01c41ebc3ba994499c335567fe9edb 456 Pfam PF02321 Outer membrane efflux protein 51 233 1.4E-19 T 10-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJM129_RS02945 6b01c41ebc3ba994499c335567fe9edb 456 Pfam PF02321 Outer membrane efflux protein 266 442 1.8E-13 T 10-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJM129_RS02945 6b01c41ebc3ba994499c335567fe9edb 456 PANTHER PTHR30203 20 440 1.5E-61 T 10-11-2016 CJM129_RS02945 6b01c41ebc3ba994499c335567fe9edb 456 PANTHER PTHR30203:SF13 20 440 1.5E-61 T 10-11-2016 CJM129_RS02945 6b01c41ebc3ba994499c335567fe9edb 456 Gene3D G3DSA:1.20.1600.10 42 442 4.1E-49 T 10-11-2016 CJM129_RS02945 6b01c41ebc3ba994499c335567fe9edb 456 SUPERFAMILY SSF56954 1 442 3.53E-62 T 10-11-2016 CJM129_RS00550 fa8b8f11fb8ea40d41506627bb02fb87 129 PANTHER PTHR13822 1 117 2.8E-21 T 10-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00550 fa8b8f11fb8ea40d41506627bb02fb87 129 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 81 1.0E-34 T 10-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00550 fa8b8f11fb8ea40d41506627bb02fb87 129 SUPERFAMILY SSF51344 4 86 1.31E-20 T 10-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00550 fa8b8f11fb8ea40d41506627bb02fb87 129 Gene3D G3DSA:2.60.15.10 5 87 3.2E-25 T 10-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00550 fa8b8f11fb8ea40d41506627bb02fb87 129 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 129 1.0E-41 T 10-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00550 fa8b8f11fb8ea40d41506627bb02fb87 129 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 125 17.648 T 10-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00550 fa8b8f11fb8ea40d41506627bb02fb87 129 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 3.0E-24 T 10-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 PIRSF PIRSF006205 1 356 9.4E-121 T 10-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 Pfam PF13288 DXP reductoisomerase C-terminal domain 239 352 4.1E-23 T 10-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 119 5.4E-34 T 10-11-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 356 38.066 T 10-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 Gene3D G3DSA:1.10.1740.10 279 355 1.3E-17 T 10-11-2016 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 128 208 3.1E-33 T 10-11-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 SUPERFAMILY SSF69055 268 355 2.49E-20 T 10-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 PANTHER PTHR30525:SF0 1 355 2.6E-111 T 10-11-2016 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 SUPERFAMILY SSF55347 113 239 6.87E-44 T 10-11-2016 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 354 5.5E-102 T 10-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 PANTHER PTHR30525 1 355 2.6E-111 T 10-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 SUPERFAMILY SSF51735 2 131 2.49E-25 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07220 bba0a9d2502ea2403b305412b6a2f062 356 Gene3D G3DSA:3.40.50.720 2 131 1.4E-37 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 Gene3D G3DSA:1.10.1060.10 107 235 7.8E-22 T 10-11-2016 CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 PANTHER PTHR11921 1 233 5.8E-50 T 10-11-2016 CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 51 59 - T 10-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 SUPERFAMILY SSF46548 108 235 1.41E-22 T 10-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 Pfam PF13183 4Fe-4S dicluster domain 147 218 1.0E-8 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 228 2.0E-50 T 10-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 109 4.3E-26 T 10-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 204 215 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 PANTHER PTHR11921:SF12 1 233 5.8E-50 T 10-11-2016 CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 Gene3D G3DSA:3.10.20.30 2 105 5.4E-25 T 10-11-2016 IPR012675 Beta-grasp domain CJM129_RS02130 cbe89c96bb0c160eda421931eb3c6d98 321 SUPERFAMILY SSF54292 2 105 5.47E-18 T 10-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJM129_RS06065 8a686c6883536bda16a1aa14a6f07b92 316 SUPERFAMILY SSF160240 236 308 2.09E-6 T 10-11-2016 CJM129_RS06065 8a686c6883536bda16a1aa14a6f07b92 316 PANTHER PTHR11562 7 316 1.6E-81 T 10-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJM129_RS06065 8a686c6883536bda16a1aa14a6f07b92 316 SUPERFAMILY SSF161111 37 234 6.28E-50 T 10-11-2016 CJM129_RS06065 8a686c6883536bda16a1aa14a6f07b92 316 PANTHER PTHR11562:SF17 7 316 1.6E-81 T 10-11-2016 CJM129_RS06065 8a686c6883536bda16a1aa14a6f07b92 316 Gene3D G3DSA:1.20.1510.10 38 233 1.9E-51 T 10-11-2016 IPR027469 Cation efflux protein transmembrane domain CJM129_RS06065 8a686c6883536bda16a1aa14a6f07b92 316 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 38 311 4.1E-85 T 10-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJM129_RS06065 8a686c6883536bda16a1aa14a6f07b92 316 Pfam PF01545 Cation efflux family 41 233 2.4E-41 T 10-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJM129_RS03145 1928765c729a8889fadfec1abba0bbe2 198 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 24 169 4.1E-12 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS03145 1928765c729a8889fadfec1abba0bbe2 198 Gene3D G3DSA:3.40.50.300 5 190 1.3E-37 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03145 1928765c729a8889fadfec1abba0bbe2 198 Pfam PF01926 50S ribosome-binding GTPase 24 152 2.1E-21 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS03145 1928765c729a8889fadfec1abba0bbe2 198 PANTHER PTHR11649 7 193 4.2E-36 T 10-11-2016 CJM129_RS03145 1928765c729a8889fadfec1abba0bbe2 198 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 10 193 27.05 T 10-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CJM129_RS03145 1928765c729a8889fadfec1abba0bbe2 198 SUPERFAMILY SSF52540 4 192 5.68E-32 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03145 1928765c729a8889fadfec1abba0bbe2 198 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 5 173 1.2E-51 T 10-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 10-11-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 Pfam PF00203 Ribosomal protein S19 3 83 2.3E-36 T 10-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.2E-21 T 10-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.2E-21 T 10-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.2E-21 T 10-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 5.7E-44 T 10-11-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.247 T 10-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 PANTHER PTHR11880 1 83 5.9E-46 T 10-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 SUPERFAMILY SSF54570 3 84 2.09E-35 T 10-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 PIRSF PIRSF002144 1 93 7.8E-32 T 10-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09075 0c7ef8de33dc96f7cab86060bf5e7ea0 93 Gene3D G3DSA:3.30.860.10 1 89 1.4E-39 T 10-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 CJM129_RS04075 acd3e9e7e760c918e81c59374ad550d9 540 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 385 413 - T 10-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CJM129_RS04075 acd3e9e7e760c918e81c59374ad550d9 540 PANTHER PTHR21666 350 530 1.2E-18 T 10-11-2016 CJM129_RS04075 acd3e9e7e760c918e81c59374ad550d9 540 SUPERFAMILY SSF53955 366 525 1.13E-33 T 10-11-2016 IPR023346 Lysozyme-like domain CJM129_RS04075 acd3e9e7e760c918e81c59374ad550d9 540 Gene3D G3DSA:1.10.530.10 365 525 1.8E-31 T 10-11-2016 CJM129_RS04075 acd3e9e7e760c918e81c59374ad550d9 540 Pfam PF01464 Transglycosylase SLT domain 375 479 1.5E-19 T 10-11-2016 IPR008258 Transglycosylase SLT domain 1 CJM129_RS01050 30602d4540398c15e3297509388e583d 363 SUPERFAMILY SSF53335 11 99 1.25E-36 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01050 30602d4540398c15e3297509388e583d 363 SUPERFAMILY SSF53335 134 317 1.25E-36 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01050 30602d4540398c15e3297509388e583d 363 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 15 318 4.4E-24 T 10-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CJM129_RS01050 30602d4540398c15e3297509388e583d 363 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 235 247 2.0E-5 T 10-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CJM129_RS01050 30602d4540398c15e3297509388e583d 363 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 65 78 2.0E-5 T 10-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CJM129_RS01050 30602d4540398c15e3297509388e583d 363 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 15 31 2.0E-5 T 10-11-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CJM129_RS01050 30602d4540398c15e3297509388e583d 363 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 238 244 - T 10-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJM129_RS01050 30602d4540398c15e3297509388e583d 363 Gene3D G3DSA:3.40.50.150 11 74 9.5E-16 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01050 30602d4540398c15e3297509388e583d 363 Gene3D G3DSA:3.40.50.150 220 345 9.5E-16 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS05360 fb167ac57eae47f7d6ef186fdb65b58c 371 PANTHER PTHR30483:SF6 4 365 1.8E-62 T 10-11-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CJM129_RS05360 fb167ac57eae47f7d6ef186fdb65b58c 371 Pfam PF13458 Periplasmic binding protein 22 360 5.4E-46 T 10-11-2016 IPR028081 Leucine-binding protein domain CJM129_RS05360 fb167ac57eae47f7d6ef186fdb65b58c 371 Gene3D G3DSA:3.40.50.2300 21 217 4.2E-47 T 10-11-2016 CJM129_RS05360 fb167ac57eae47f7d6ef186fdb65b58c 371 PANTHER PTHR30483 4 365 1.8E-62 T 10-11-2016 CJM129_RS05360 fb167ac57eae47f7d6ef186fdb65b58c 371 SUPERFAMILY SSF53822 20 363 1.24E-74 T 10-11-2016 IPR028082 Periplasmic binding protein-like I CJM129_RS00105 b167e7f228bdf32265be0b5365f1c467 298 PANTHER PTHR11079 25 285 9.3E-53 T 10-11-2016 CJM129_RS00105 b167e7f228bdf32265be0b5365f1c467 298 SUPERFAMILY SSF55120 67 281 3.36E-53 T 10-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS00105 b167e7f228bdf32265be0b5365f1c467 298 Pfam PF00849 RNA pseudouridylate synthase 78 225 2.5E-28 T 10-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS00105 b167e7f228bdf32265be0b5365f1c467 298 PANTHER PTHR11079:SF73 25 285 9.3E-53 T 10-11-2016 CJM129_RS00105 b167e7f228bdf32265be0b5365f1c467 298 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 115 129 - T 10-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 Pfam PF01926 50S ribosome-binding GTPase 160 266 2.5E-21 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 PANTHER PTHR11702 2 338 3.8E-124 T 10-11-2016 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 PANTHER PTHR11702:SF3 2 338 3.8E-124 T 10-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 337 3.6E-121 T 10-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 Hamap MF_01454 GTPase Obg [obg]. 1 339 44.578 T 10-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 SUPERFAMILY SSF82051 1 157 9.81E-53 T 10-11-2016 IPR006169 GTP1/OBG domain GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 PIRSF PIRSF002401 1 345 1.8E-119 T 10-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 Pfam PF01018 GTP1/OBG 2 157 9.2E-56 T 10-11-2016 IPR006169 GTP1/OBG domain GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 10-11-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 Gene3D G3DSA:2.70.210.12 1 155 8.0E-53 T 10-11-2016 IPR006169 GTP1/OBG domain GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 3.7E-34 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 3.7E-34 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 3.7E-34 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 3.7E-34 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 SUPERFAMILY SSF52540 151 340 2.59E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00490 ee5c6b85cba5ae9a44cba04e8d5806c3 345 Gene3D G3DSA:3.40.50.300 159 340 5.6E-45 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02495 24f6705a99c1e1c5be938e673df1940f 105 Pfam PF00581 Rhodanese-like domain 10 103 2.3E-11 T 10-11-2016 IPR001763 Rhodanese-like domain CJM129_RS02495 24f6705a99c1e1c5be938e673df1940f 105 Gene3D G3DSA:3.40.250.10 15 103 1.5E-15 T 10-11-2016 IPR001763 Rhodanese-like domain CJM129_RS02495 24f6705a99c1e1c5be938e673df1940f 105 SUPERFAMILY SSF52821 14 103 4.85E-16 T 10-11-2016 IPR001763 Rhodanese-like domain CJM129_RS02495 24f6705a99c1e1c5be938e673df1940f 105 SMART SM00450 4 105 7.0E-6 T 10-11-2016 IPR001763 Rhodanese-like domain CJM129_RS04655 47502f62a4a3b76ba91f6eb14c6c58d0 116 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 67 2.0E-23 T 10-11-2016 IPR002696 Putative membrane protein insertion efficiency factor CJM129_RS04655 47502f62a4a3b76ba91f6eb14c6c58d0 116 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 7 73 1.1E-24 T 10-11-2016 IPR002696 Putative membrane protein insertion efficiency factor CJM129_RS04655 47502f62a4a3b76ba91f6eb14c6c58d0 116 SMART SM01234 2 69 1.4E-30 T 10-11-2016 IPR002696 Putative membrane protein insertion efficiency factor CJM129_RS04655 47502f62a4a3b76ba91f6eb14c6c58d0 116 PANTHER PTHR33383 1 70 1.2E-20 T 10-11-2016 CJM129_RS04655 47502f62a4a3b76ba91f6eb14c6c58d0 116 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 20.363 T 10-11-2016 IPR002696 Putative membrane protein insertion efficiency factor CJM129_RS04655 47502f62a4a3b76ba91f6eb14c6c58d0 116 Pfam PF01809 Haemolytic domain 5 68 2.4E-22 T 10-11-2016 IPR002696 Putative membrane protein insertion efficiency factor CJM129_RS07200 21bccfd3cb530c83e808910bc1bf2cbb 171 PANTHER PTHR30093 1 63 6.5E-12 T 10-11-2016 CJM129_RS07200 21bccfd3cb530c83e808910bc1bf2cbb 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.1E-5 T 10-11-2016 IPR012902 Prokaryotic N-terminal methylation site CJM129_RS07200 21bccfd3cb530c83e808910bc1bf2cbb 171 PRINTS PR00813 Bacterial general secretion pathway protein G signature 40 58 5.9E-10 T 10-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CJM129_RS07200 21bccfd3cb530c83e808910bc1bf2cbb 171 PRINTS PR00813 Bacterial general secretion pathway protein G signature 4 29 5.9E-10 T 10-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CJM129_RS07200 21bccfd3cb530c83e808910bc1bf2cbb 171 Gene3D G3DSA:3.30.700.10 5 71 2.4E-9 T 10-11-2016 CJM129_RS07200 21bccfd3cb530c83e808910bc1bf2cbb 171 SUPERFAMILY SSF54523 5 68 1.33E-13 T 10-11-2016 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 Pfam PF00679 Elongation factor G C-terminus 401 487 3.8E-22 T 10-11-2016 IPR000640 Translation elongation factor EFG, V domain CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 PANTHER PTHR23115 403 598 2.9E-264 T 10-11-2016 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 10-11-2016 IPR031157 Tr-type G domain, conserved site CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.5E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 PRINTS PR00315 GTP-binding elongation factor signature 8 21 1.5E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.5E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.5E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.5E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 Pfam PF03144 Elongation factor Tu domain 2 206 277 1.7E-10 T 10-11-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 PANTHER PTHR23115 5 375 2.9E-264 T 10-11-2016 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 Gene3D G3DSA:2.40.30.10 195 291 7.9E-24 T 10-11-2016 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 PANTHER PTHR23115:SF97 5 375 2.9E-264 T 10-11-2016 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 SUPERFAMILY SSF54980 295 372 3.27E-16 T 10-11-2016 IPR009022 Elongation factor G, III-V domain CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 281.33 T 10-11-2016 IPR006297 Elongation factor 4 GO:0005525 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 Pfam PF00009 Elongation factor Tu GTP binding domain 4 182 2.3E-55 T 10-11-2016 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 Gene3D G3DSA:3.30.70.240 403 489 3.0E-20 T 10-11-2016 IPR000640 Translation elongation factor EFG, V domain CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 Pfam PF06421 GTP-binding protein LepA C-terminus 491 596 2.7E-47 T 10-11-2016 IPR013842 GTP-binding protein LepA, C-terminal CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 SMART SM00838 400 488 0.0054 T 10-11-2016 IPR000640 Translation elongation factor EFG, V domain CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 TIGRFAM TIGR01393 lepA: elongation factor 4 4 598 9.5E-303 T 10-11-2016 IPR006297 Elongation factor 4 GO:0005525 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 Gene3D G3DSA:3.40.50.300 4 194 4.3E-62 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 SUPERFAMILY SSF54980 401 496 3.21E-23 T 10-11-2016 IPR009022 Elongation factor G, III-V domain CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 SUPERFAMILY SSF52540 3 230 4.15E-58 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 Gene3D G3DSA:3.30.70.870 295 371 5.1E-23 T 10-11-2016 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 177 7.7E-21 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS05415 50c5a54cd587ea1caf724763b683a260 598 PANTHER PTHR23115:SF97 403 598 2.9E-264 T 10-11-2016 CJM129_RS00625 9140b8ffb4a701cb4cc2d11334082209 308 Pfam PF01207 Dihydrouridine synthase (Dus) 11 302 6.9E-76 T 10-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CJM129_RS00625 9140b8ffb4a701cb4cc2d11334082209 308 Gene3D G3DSA:1.10.1200.80 244 306 3.1E-19 T 10-11-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CJM129_RS00625 9140b8ffb4a701cb4cc2d11334082209 308 PANTHER PTHR11082:SF25 5 305 9.9E-105 T 10-11-2016 CJM129_RS00625 9140b8ffb4a701cb4cc2d11334082209 308 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 10-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CJM129_RS00625 9140b8ffb4a701cb4cc2d11334082209 308 Gene3D G3DSA:3.20.20.70 6 240 9.7E-71 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS00625 9140b8ffb4a701cb4cc2d11334082209 308 PIRSF PIRSF006621 2 307 3.0E-85 T 10-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CJM129_RS00625 9140b8ffb4a701cb4cc2d11334082209 308 SUPERFAMILY SSF51395 8 306 9.15E-71 T 10-11-2016 CJM129_RS00625 9140b8ffb4a701cb4cc2d11334082209 308 PANTHER PTHR11082 5 305 9.9E-105 T 10-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 SUPERFAMILY SSF56634 4 473 1.31E-202 T 10-11-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 Gene3D G3DSA:2.40.180.10 2 353 1.3E-174 T 10-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 PRINTS PR00067 Catalase signature 80 98 1.1E-70 T 10-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 PRINTS PR00067 Catalase signature 317 343 1.1E-70 T 10-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 PRINTS PR00067 Catalase signature 18 41 1.1E-70 T 10-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 PRINTS PR00067 Catalase signature 120 138 1.1E-70 T 10-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 PRINTS PR00067 Catalase signature 101 118 1.1E-70 T 10-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 PRINTS PR00067 Catalase signature 285 312 1.1E-70 T 10-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 SMART SM01060 5 388 1.2E-280 T 10-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 330 338 - T 10-11-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 Pfam PF06628 Catalase-related immune-responsive 413 472 2.7E-20 T 10-11-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 PIRSF PIRSF038928 1 474 1.8E-216 T 10-11-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 PANTHER PTHR11465 4 474 7.0E-278 T 10-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS07430 30ff704cfd782e71bddeb9d5bcac6cae 474 Pfam PF00199 Catalase 5 385 5.4E-185 T 10-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CJM129_RS00580 6828b768bc5c7b675f16b82d33cc07aa 315 SUPERFAMILY SSF48452 211 309 8.43E-10 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS00580 6828b768bc5c7b675f16b82d33cc07aa 315 Pfam PF13174 Tetratricopeptide repeat 275 305 0.0027 T 10-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CJM129_RS00580 6828b768bc5c7b675f16b82d33cc07aa 315 Gene3D G3DSA:1.25.40.10 205 308 2.2E-7 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 PANTHER PTHR11085 2 196 4.9E-52 T 10-11-2016 IPR003000 Sirtuin family GO:0070403 CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 2 226 53.726 T 10-11-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 Gene3D G3DSA:3.40.50.1220 158 213 3.6E-28 T 10-11-2016 IPR029035 DHS-like NAD/FAD-binding domain CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 Gene3D G3DSA:3.40.50.1220 2 17 3.6E-28 T 10-11-2016 IPR029035 DHS-like NAD/FAD-binding domain CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 Gene3D G3DSA:3.40.50.1220 65 107 3.6E-28 T 10-11-2016 IPR029035 DHS-like NAD/FAD-binding domain CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 SUPERFAMILY SSF52467 1 217 6.54E-57 T 10-11-2016 IPR029035 DHS-like NAD/FAD-binding domain CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 PANTHER PTHR11085:SF17 2 196 4.9E-52 T 10-11-2016 CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 Gene3D G3DSA:3.30.1600.10 19 57 3.3E-20 T 10-11-2016 IPR026591 Sirtuin family, catalytic core small domain CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 Gene3D G3DSA:3.30.1600.10 108 151 3.3E-20 T 10-11-2016 IPR026591 Sirtuin family, catalytic core small domain CJM129_RS05515 78da4a4544a707e0325ccc60812c0bed 233 Pfam PF02146 Sir2 family 9 179 1.7E-38 T 10-11-2016 IPR003000 Sirtuin family GO:0070403 CJM129_RS01130 a0a787a5f1ab5eea8b4ec598fd259d15 202 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 2 200 1.5E-91 T 10-11-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01130 a0a787a5f1ab5eea8b4ec598fd259d15 202 Gene3D G3DSA:3.40.50.2020 5 200 3.3E-41 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS01130 a0a787a5f1ab5eea8b4ec598fd259d15 202 PANTHER PTHR19278 11 154 2.6E-25 T 10-11-2016 CJM129_RS01130 a0a787a5f1ab5eea8b4ec598fd259d15 202 SUPERFAMILY SSF53271 8 189 1.25E-37 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS01130 a0a787a5f1ab5eea8b4ec598fd259d15 202 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 202 24.219 T 10-11-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01130 a0a787a5f1ab5eea8b4ec598fd259d15 202 Pfam PF00156 Phosphoribosyl transferase domain 34 151 1.7E-10 T 10-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 PANTHER PTHR30195 99 571 3.3E-121 T 10-11-2016 CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 PANTHER PTHR30195:SF10 99 571 3.3E-121 T 10-11-2016 CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 SUPERFAMILY SSF53335 593 635 2.52E-103 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 SUPERFAMILY SSF53335 8 47 2.52E-103 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 SUPERFAMILY SSF53335 79 496 2.52E-103 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 Pfam PF02384 N-6 DNA Methylase 173 485 2.0E-61 T 10-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 224 238 1.7E-11 T 10-11-2016 CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 209 1.7E-11 T 10-11-2016 CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 1.7E-11 T 10-11-2016 CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 10-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 Gene3D G3DSA:3.40.50.150 195 445 1.2E-31 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03660 f18de059aaa939aa05f8de7266f85c43 636 Pfam PF12161 HsdM N-terminal domain 9 144 6.4E-18 T 10-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CJM129_RS07395 7b034c4c82be9ec2bdec778fd149b060 440 PANTHER PTHR32328:SF0 1 440 3.3E-137 T 10-11-2016 CJM129_RS07395 7b034c4c82be9ec2bdec778fd149b060 440 SUPERFAMILY SSF53383 61 435 2.87E-42 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS07395 7b034c4c82be9ec2bdec778fd149b060 440 Gene3D G3DSA:3.40.640.10 124 305 6.3E-24 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS07395 7b034c4c82be9ec2bdec778fd149b060 440 Pfam PF03841 L-seryl-tRNA selenium transferase 71 422 2.3E-157 T 10-11-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CJM129_RS07395 7b034c4c82be9ec2bdec778fd149b060 440 PANTHER PTHR32328 1 440 3.3E-137 T 10-11-2016 CJM129_RS07395 7b034c4c82be9ec2bdec778fd149b060 440 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 440 164.149 T 10-11-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CJM129_RS07395 7b034c4c82be9ec2bdec778fd149b060 440 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 4 435 8.1E-165 T 10-11-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 CJM129_RS00100 1e9cacf05e8f0aa8bff47e9eb50d2298 292 PANTHER PTHR11820:SF6 1 289 7.8E-85 T 10-11-2016 CJM129_RS00100 1e9cacf05e8f0aa8bff47e9eb50d2298 292 Gene3D G3DSA:3.90.850.10 69 288 3.0E-66 T 10-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJM129_RS00100 1e9cacf05e8f0aa8bff47e9eb50d2298 292 SUPERFAMILY SSF56529 68 288 2.49E-62 T 10-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJM129_RS00100 1e9cacf05e8f0aa8bff47e9eb50d2298 292 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 77 287 1.9E-54 T 10-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJM129_RS00100 1e9cacf05e8f0aa8bff47e9eb50d2298 292 PANTHER PTHR11820 1 289 7.8E-85 T 10-11-2016 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 Pfam PF13184 NusA-like KH domain 229 297 3.3E-21 T 10-11-2016 IPR025249 KH domain, NusA-like GO:0003723 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 339 9.3E-111 T 10-11-2016 IPR010213 Transcription termination factor NusA GO:0003723 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 SUPERFAMILY SSF69705 4 121 2.09E-21 T 10-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 SUPERFAMILY SSF54814 280 338 4.97E-9 T 10-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 Gene3D G3DSA:3.30.300.20 198 276 3.1E-30 T 10-11-2016 IPR015946 K homology domain-like, alpha/beta CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 Gene3D G3DSA:2.40.50.140 135 197 1.7E-15 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 SMART SM00316 133 199 1.0E-6 T 10-11-2016 IPR022967 RNA-binding domain, S1 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 Gene3D G3DSA:3.30.300.20 279 340 2.5E-18 T 10-11-2016 IPR015946 K homology domain-like, alpha/beta CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 SUPERFAMILY SSF50249 115 208 1.93E-11 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 Gene3D G3DSA:3.30.1480.10 3 118 4.1E-16 T 10-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 PANTHER PTHR22648:SF0 1 362 1.8E-75 T 10-11-2016 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 360 23.683 T 10-11-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 Pfam PF08529 NusA N-terminal domain 4 120 4.2E-15 T 10-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 SUPERFAMILY SSF54814 199 276 2.94E-25 T 10-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CJM129_RS02230 df9df962c78659c5cabe673b04c4e9e8 362 PANTHER PTHR22648 1 362 1.8E-75 T 10-11-2016 CJM129_RS01350 e3d2f01a2f5dfd36bc504ac8c5045001 207 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 176 7.0E-20 T 10-11-2016 CJM129_RS01350 e3d2f01a2f5dfd36bc504ac8c5045001 207 SUPERFAMILY SSF56784 1 207 1.25E-51 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS01350 e3d2f01a2f5dfd36bc504ac8c5045001 207 PANTHER PTHR10000:SF7 3 207 2.9E-52 T 10-11-2016 CJM129_RS01350 e3d2f01a2f5dfd36bc504ac8c5045001 207 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 3 207 1.9E-66 T 10-11-2016 CJM129_RS01350 e3d2f01a2f5dfd36bc504ac8c5045001 207 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 173 1.0E-26 T 10-11-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CJM129_RS01350 e3d2f01a2f5dfd36bc504ac8c5045001 207 Gene3D G3DSA:3.40.50.1000 75 207 5.0E-30 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS01350 e3d2f01a2f5dfd36bc504ac8c5045001 207 Gene3D G3DSA:3.40.50.1000 5 17 5.0E-30 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS01350 e3d2f01a2f5dfd36bc504ac8c5045001 207 Gene3D G3DSA:1.10.150.210 18 73 1.9E-18 T 10-11-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 CJM129_RS01350 e3d2f01a2f5dfd36bc504ac8c5045001 207 PANTHER PTHR10000 3 207 2.9E-52 T 10-11-2016 CJM129_RS02885 32221e1d4ca3e057240290790c2902e6 273 PANTHER PTHR10657 6 272 1.5E-37 T 10-11-2016 CJM129_RS02885 32221e1d4ca3e057240290790c2902e6 273 Gene3D G3DSA:3.10.50.40 123 249 2.1E-36 T 10-11-2016 CJM129_RS02885 32221e1d4ca3e057240290790c2902e6 273 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 166 187 - T 10-11-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CJM129_RS02885 32221e1d4ca3e057240290790c2902e6 273 SUPERFAMILY SSF54534 104 225 8.5E-26 T 10-11-2016 CJM129_RS02885 32221e1d4ca3e057240290790c2902e6 273 Pfam PF13616 PPIC-type PPIASE domain 124 224 1.9E-22 T 10-11-2016 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 SUPERFAMILY SSF56327 144 304 1.05E-43 T 10-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 7.0E-30 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 7.0E-30 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 PRINTS PR00086 L-lactate dehydrogenase signature 28 52 7.0E-30 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 PRINTS PR00086 L-lactate dehydrogenase signature 3 27 7.0E-30 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 7.0E-30 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 146 306 1.3E-21 T 10-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 PANTHER PTHR11540:SF3 3 306 4.9E-86 T 10-11-2016 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 PANTHER PTHR11540 3 306 4.9E-86 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 Gene3D G3DSA:3.90.110.10 147 305 2.5E-46 T 10-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 PIRSF PIRSF000102 1 308 2.6E-87 T 10-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 Gene3D G3DSA:3.40.50.720 2 146 1.5E-35 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 3 143 1.7E-17 T 10-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 SUPERFAMILY SSF51735 2 145 1.04E-29 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06085 d85cf61028057dfdd7096ba7476cba7b 308 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 173 179 - T 10-11-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 CJM129_RS01600 b570fd251f12522eda801b97d58358fd 247 SUPERFAMILY SSF103088 111 222 2.22E-20 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS01600 b570fd251f12522eda801b97d58358fd 247 PANTHER PTHR30329 1 246 8.5E-22 T 10-11-2016 CJM129_RS01600 b570fd251f12522eda801b97d58358fd 247 Gene3D G3DSA:3.30.1330.60 103 222 4.7E-20 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS01600 b570fd251f12522eda801b97d58358fd 247 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 54 2.8E-15 T 10-11-2016 IPR025713 Motility protein B, N-terminal domain CJM129_RS01600 b570fd251f12522eda801b97d58358fd 247 PANTHER PTHR30329:SF4 1 246 8.5E-22 T 10-11-2016 CJM129_RS01600 b570fd251f12522eda801b97d58358fd 247 Pfam PF00691 OmpA family 123 215 7.3E-14 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS05160 60e035a9f51e8597a7df68ea517ad8c4 235 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 131 216 1.5E-15 T 10-11-2016 IPR032871 AHH domain-containing protein CJM129_RS00595 fca01bfb0482865f90080e1b62174d1d 228 SUPERFAMILY SSF53167 1 227 1.96E-64 T 10-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJM129_RS00595 fca01bfb0482865f90080e1b62174d1d 228 Gene3D G3DSA:3.40.50.1580 1 228 1.3E-68 T 10-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJM129_RS00595 fca01bfb0482865f90080e1b62174d1d 228 PANTHER PTHR21234:SF16 1 228 1.6E-39 T 10-11-2016 CJM129_RS00595 fca01bfb0482865f90080e1b62174d1d 228 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 1.8E-49 T 10-11-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 CJM129_RS00595 fca01bfb0482865f90080e1b62174d1d 228 Pfam PF01048 Phosphorylase superfamily 2 217 5.2E-43 T 10-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJM129_RS00595 fca01bfb0482865f90080e1b62174d1d 228 PANTHER PTHR21234 1 228 1.6E-39 T 10-11-2016 IPR018017 Nucleoside phosphorylase CJM129_RS03840 3445b52a0457eaf376d02800c4884d7d 273 SUPERFAMILY SSF52980 167 266 8.04E-5 T 10-11-2016 IPR011335 Restriction endonuclease type II-like CJM129_RS03840 3445b52a0457eaf376d02800c4884d7d 273 Gene3D G3DSA:3.40.1350.10 164 268 4.5E-6 T 10-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CJM129_RS03840 3445b52a0457eaf376d02800c4884d7d 273 Pfam PF03008 Archaea bacterial proteins of unknown function 133 219 1.4E-12 T 10-11-2016 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal CJM129_RS00670 b3603bf523ed1a23ca3217c8715c0699 294 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 287 6.6E-115 T 10-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CJM129_RS00670 b3603bf523ed1a23ca3217c8715c0699 294 Gene3D G3DSA:3.30.1700.10 126 277 4.1E-57 T 10-11-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CJM129_RS00670 b3603bf523ed1a23ca3217c8715c0699 294 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 270 2.4E-101 T 10-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CJM129_RS00670 b3603bf523ed1a23ca3217c8715c0699 294 SUPERFAMILY SSF54211 1 121 9.1E-37 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS00670 b3603bf523ed1a23ca3217c8715c0699 294 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 1 275 46.316 T 10-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CJM129_RS00670 b3603bf523ed1a23ca3217c8715c0699 294 SUPERFAMILY SSF54211 130 272 6.14E-49 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS00670 b3603bf523ed1a23ca3217c8715c0699 294 PANTHER PTHR33694:SF1 1 283 5.0E-105 T 10-11-2016 CJM129_RS00670 b3603bf523ed1a23ca3217c8715c0699 294 Gene3D G3DSA:3.30.230.20 1 121 7.4E-39 T 10-11-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 CJM129_RS00670 b3603bf523ed1a23ca3217c8715c0699 294 PANTHER PTHR33694 1 283 5.0E-105 T 10-11-2016 CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 3.0E-19 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 SMART SM00448 2 111 6.6E-35 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 Pfam PF00072 Response regulator receiver domain 4 111 3.7E-25 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 Gene3D G3DSA:3.40.50.2300 1 147 3.5E-36 T 10-11-2016 CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 PANTHER PTHR26402 2 222 9.6E-64 T 10-11-2016 CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 Gene3D G3DSA:1.10.10.10 148 221 3.8E-24 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 SUPERFAMILY SSF52172 1 124 1.57E-34 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 SUPERFAMILY SSF46894 131 222 6.52E-22 T 10-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 SMART SM00862 146 221 1.5E-16 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS06555 97e02195723c35d429ccaee3dbec53e6 223 PANTHER PTHR26402:SF292 2 222 9.6E-64 T 10-11-2016 CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 PRINTS PR01388 Cytolethal distending toxin B signature 18 39 8.8E-58 T 10-11-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 PRINTS PR01388 Cytolethal distending toxin B signature 179 194 8.8E-58 T 10-11-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 PRINTS PR01388 Cytolethal distending toxin B signature 244 260 8.8E-58 T 10-11-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 PRINTS PR01388 Cytolethal distending toxin B signature 59 79 8.8E-58 T 10-11-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 PRINTS PR01388 Cytolethal distending toxin B signature 93 111 8.8E-58 T 10-11-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 PRINTS PR01388 Cytolethal distending toxin B signature 136 155 8.8E-58 T 10-11-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 PIRSF PIRSF018539 1 265 7.7E-133 T 10-11-2016 IPR003539 Cytolethal distending toxin B GO:0009405 CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 24 257 8.3E-11 T 10-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 Gene3D G3DSA:3.60.10.10 8 264 9.2E-111 T 10-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase CJM129_RS00405 14d5b82e4d139b6b95453b1e846e9a01 265 SUPERFAMILY SSF56219 17 261 2.62E-30 T 10-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 Gene3D G3DSA:3.90.190.20 292 424 1.3E-32 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 SUPERFAMILY SSF51984 1 88 7.59E-28 T 10-11-2016 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 3 424 7.2E-123 T 10-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 PANTHER PTHR23135:SF5 1 423 4.9E-119 T 10-11-2016 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 Pfam PF08245 Mur ligase middle domain 106 220 2.2E-10 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 SUPERFAMILY SSF53623 88 287 3.79E-40 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 428 33.737 T 10-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 Pfam PF02875 Mur ligase family, glutamate ligase domain 291 377 7.3E-19 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 Gene3D G3DSA:3.40.1190.10 90 291 7.2E-40 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 Pfam PF01225 Mur ligase family, catalytic domain 4 101 2.3E-22 T 10-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 SUPERFAMILY SSF53244 289 424 3.3E-29 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 PANTHER PTHR23135 1 423 4.9E-119 T 10-11-2016 CJM129_RS05535 3a2a4dc05993613d70cc7e4b168ceb4f 431 Gene3D G3DSA:3.40.50.720 3 88 4.6E-34 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00600 239b14055162fb76746f5204c0d229db 251 Gene3D G3DSA:3.40.50.620 19 190 2.2E-22 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS00600 239b14055162fb76746f5204c0d229db 251 SUPERFAMILY SSF52402 5 201 5.29E-46 T 10-11-2016 CJM129_RS00600 239b14055162fb76746f5204c0d229db 251 Pfam PF01171 PP-loop family 28 190 7.5E-22 T 10-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CJM129_RS00600 239b14055162fb76746f5204c0d229db 251 PANTHER PTHR11807:SF16 4 250 2.0E-53 T 10-11-2016 CJM129_RS00600 239b14055162fb76746f5204c0d229db 251 PANTHER PTHR11807 4 250 2.0E-53 T 10-11-2016 CJM129_RS00600 239b14055162fb76746f5204c0d229db 251 PIRSF PIRSF004976 3 251 1.5E-66 T 10-11-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 SMART SM00116 95 143 5.7E-11 T 10-11-2016 IPR000644 CBS domain CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 SMART SM00116 156 204 1.8E-5 T 10-11-2016 IPR000644 CBS domain CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 450 9.2E-193 T 10-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 482 85.405 T 10-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 Gene3D G3DSA:3.20.20.70 3 481 2.6E-204 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 291 303 - T 10-11-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 Pfam PF00571 CBS domain 95 139 3.6E-13 T 10-11-2016 IPR000644 CBS domain CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 Pfam PF00571 CBS domain 148 200 1.9E-9 T 10-11-2016 IPR000644 CBS domain CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 PIRSF PIRSF000130 1 484 3.0E-210 T 10-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 PANTHER PTHR11911 1 277 1.7E-242 T 10-11-2016 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 SUPERFAMILY SSF54631 73 201 1.16E-32 T 10-11-2016 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 PANTHER PTHR11911:SF6 1 277 1.7E-242 T 10-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 PANTHER PTHR11911 295 481 1.7E-242 T 10-11-2016 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 SUPERFAMILY SSF51412 2 89 1.96E-126 T 10-11-2016 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 SUPERFAMILY SSF51412 215 473 1.96E-126 T 10-11-2016 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 PANTHER PTHR11911:SF6 295 481 1.7E-242 T 10-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 SMART SM01240 6 469 0.0 T 10-11-2016 CJM129_RS05555 7df43fe42f9ec4ee091453a8b0e04a9d 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 469 5.0E-164 T 10-11-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 80 102 6.2E-46 T 10-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 226 248 6.2E-46 T 10-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 102 129 6.2E-46 T 10-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 5 31 6.2E-46 T 10-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 248 273 6.2E-46 T 10-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 Gene3D G3DSA:3.30.70.260 4 63 2.5E-7 T 10-11-2016 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 Gene3D G3DSA:3.40.50.170 78 270 2.1E-54 T 10-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 Pfam PF00551 Formyl transferase 80 256 6.6E-46 T 10-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 274 40.841 T 10-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 SUPERFAMILY SSF53328 81 274 6.67E-59 T 10-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 PIRSF PIRSF036480 1 274 4.3E-104 T 10-11-2016 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 PANTHER PTHR10520:SF7 13 268 2.9E-114 T 10-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 4 274 2.7E-107 T 10-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 PANTHER PTHR10520 13 268 2.9E-114 T 10-11-2016 CJM129_RS03830 b8d81b7e096e19ad4a3f8a8f79f364e7 274 SUPERFAMILY SSF55021 2 65 7.08E-8 T 10-11-2016 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 SUPERFAMILY SSF48295 331 434 2.88E-30 T 10-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 SMART SM00382 135 261 8.2E-8 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 Pfam PF11638 DnaA N-terminal domain 4 61 2.2E-9 T 10-11-2016 IPR024633 DnaA N-terminal domain CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 Pfam PF00308 Bacterial dnaA protein 101 317 3.8E-75 T 10-11-2016 IPR013317 Chromosomal replication initiator protein DnaA CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 345 413 1.6E-21 T 10-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 Gene3D G3DSA:1.10.8.60 268 334 1.3E-23 T 10-11-2016 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 434 6.9E-144 T 10-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 Gene3D G3DSA:1.10.1750.10 335 434 1.3E-31 T 10-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 SUPERFAMILY SSF52540 102 309 1.94E-42 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 SMART SM00760 344 413 1.5E-29 T 10-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 232 259 2.6E-38 T 10-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 394 413 2.6E-38 T 10-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 2.6E-38 T 10-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 136 156 2.6E-38 T 10-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 180 2.6E-38 T 10-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 PANTHER PTHR30050:SF2 4 437 1.1E-145 T 10-11-2016 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 435 28.876 T 10-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 PANTHER PTHR30050 4 437 1.1E-145 T 10-11-2016 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 ProSitePatterns PS01008 DnaA protein signature. 394 413 - T 10-11-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CJM129_RS00005 fe07dec4ee7ec08e8b8b34f71252b68d 440 Gene3D G3DSA:3.40.50.300 98 265 1.6E-51 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 Pfam PF00625 Guanylate kinase 6 182 6.6E-50 T 10-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 SUPERFAMILY SSF52540 2 187 3.97E-63 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 10-11-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 Gene3D G3DSA:3.30.63.10 44 85 2.0E-27 T 10-11-2016 CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 Gene3D G3DSA:3.40.50.300 3 14 2.5E-41 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 Gene3D G3DSA:3.40.50.300 86 191 2.5E-41 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 PANTHER PTHR23117 8 184 2.3E-80 T 10-11-2016 CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 183 1.1E-69 T 10-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 Hamap MF_00328 Guanylate kinase [gmk]. 1 186 34.706 T 10-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 Gene3D G3DSA:3.40.50.300 15 43 1.5E-4 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06135 1ea906f5b97dc6f40a1e7543b3dc8730 205 SMART SM00072 2 186 1.1E-57 T 10-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CJM129_RS00555 e1cec96ad32662070c1daaed1493dba3 184 PIRSF PIRSF037713 2 184 1.5E-84 T 10-11-2016 IPR017269 Biopolymer transport ExbB-like protein 1 CJM129_RS00555 e1cec96ad32662070c1daaed1493dba3 184 PANTHER PTHR30625 94 177 2.1E-18 T 10-11-2016 CJM129_RS00555 e1cec96ad32662070c1daaed1493dba3 184 Pfam PF01618 MotA/TolQ/ExbB proton channel family 72 171 5.1E-26 T 10-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 3 334 58.149 T 10-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 SUPERFAMILY SSF53067 4 121 3.43E-23 T 10-11-2016 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 5 312 3.9E-104 T 10-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 75 95 5.8E-36 T 10-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 262 271 5.8E-36 T 10-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 6 19 5.8E-36 T 10-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 96 115 5.8E-36 T 10-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 129 141 5.8E-36 T 10-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 152 173 5.8E-36 T 10-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 PANTHER PTHR11735:SF6 4 324 5.6E-103 T 10-11-2016 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 Gene3D G3DSA:3.30.420.40 4 142 2.0E-29 T 10-11-2016 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 ProSitePatterns PS01016 Glycoprotease family signature. 95 115 - T 10-11-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 6 305 2.4E-97 T 10-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 SUPERFAMILY SSF53067 100 308 4.53E-25 T 10-11-2016 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 PANTHER PTHR11735 4 324 5.6E-103 T 10-11-2016 CJM129_RS07205 586e9c1679411427984e0619c2787e34 335 Pfam PF00814 Glycoprotease family 33 305 1.3E-73 T 10-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJM129_RS01120 965122c91275f47e5f32544004731650 340 PIRSF PIRSF000355 1 340 1.2E-109 T 10-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CJM129_RS01120 965122c91275f47e5f32544004731650 340 Pfam PF00268 Ribonucleotide reductase, small chain 30 305 2.6E-63 T 10-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CJM129_RS01120 965122c91275f47e5f32544004731650 340 SUPERFAMILY SSF47240 17 336 8.12E-86 T 10-11-2016 IPR009078 Ferritin-like superfamily CJM129_RS01120 965122c91275f47e5f32544004731650 340 PANTHER PTHR23409 1 335 3.8E-61 T 10-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 CJM129_RS01120 965122c91275f47e5f32544004731650 340 PANTHER PTHR23409:SF18 1 335 3.8E-61 T 10-11-2016 CJM129_RS01120 965122c91275f47e5f32544004731650 340 Gene3D G3DSA:1.10.620.20 17 313 3.6E-91 T 10-11-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 CJM129_RS03630 3980271309670e9b9bb90bb89f0fc0e5 184 PANTHER PTHR30405 1 164 1.9E-35 T 10-11-2016 CJM129_RS03630 3980271309670e9b9bb90bb89f0fc0e5 184 Pfam PF07282 Putative transposase DNA-binding domain 93 162 1.4E-25 T 10-11-2016 IPR010095 Transposase IS605, OrfB, C-terminal CJM129_RS03630 3980271309670e9b9bb90bb89f0fc0e5 184 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 38 120 2.8E-13 T 10-11-2016 IPR010095 Transposase IS605, OrfB, C-terminal CJM129_RS03630 3980271309670e9b9bb90bb89f0fc0e5 184 Pfam PF01385 Probable transposase 14 71 9.0E-10 T 10-11-2016 IPR001959 Probable transposase, IS891/IS1136/IS1341 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 Pfam PF03144 Elongation factor Tu domain 2 230 298 6.5E-19 T 10-11-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 SUPERFAMILY SSF50447 210 306 6.09E-31 T 10-11-2016 IPR009000 Translation protein, beta-barrel domain CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 PANTHER PTHR23115:SF112 1 399 3.7E-246 T 10-11-2016 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 10-11-2016 IPR031157 Tr-type G domain, conserved site CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 PANTHER PTHR23115 1 399 3.7E-246 T 10-11-2016 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.3E-24 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.3E-24 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.3E-24 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.3E-24 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.3E-24 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 Gene3D G3DSA:2.40.30.10 214 303 1.3E-36 T 10-11-2016 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 Gene3D G3DSA:3.40.50.300 3 213 4.4E-70 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 1.4E-58 T 10-11-2016 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 SUPERFAMILY SSF50465 307 399 2.64E-35 T 10-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 Pfam PF03143 Elongation factor Tu C-terminal domain 303 397 1.9E-32 T 10-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 7.0E-14 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 399 1.3E-228 T 10-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 399 59.942 T 10-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 SUPERFAMILY SSF52540 8 231 2.66E-60 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02300 8cfd43f7eb81c541e41805f6a72a7b68 399 Gene3D G3DSA:2.40.30.10 305 398 5.9E-45 T 10-11-2016 CJM129_RS05850 9704acd900842dee7714071aa5d40125 281 Gene3D G3DSA:3.40.50.150 97 271 4.5E-27 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS05850 9704acd900842dee7714071aa5d40125 281 PANTHER PTHR18895 81 279 2.3E-34 T 10-11-2016 CJM129_RS05850 9704acd900842dee7714071aa5d40125 281 SUPERFAMILY SSF53335 68 271 4.59E-30 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS05850 9704acd900842dee7714071aa5d40125 281 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 1 277 27.785 T 10-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CJM129_RS05850 9704acd900842dee7714071aa5d40125 281 PANTHER PTHR18895:SF3 81 279 2.3E-34 T 10-11-2016 CJM129_RS05850 9704acd900842dee7714071aa5d40125 281 PIRSF PIRSF000401 13 279 4.2E-53 T 10-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CJM129_RS05850 9704acd900842dee7714071aa5d40125 281 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 62 277 4.4E-49 T 10-11-2016 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 SUPERFAMILY SSF81923 5 130 1.08E-13 T 10-11-2016 IPR004176 Clp, N-terminal GO:0019538 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 619 696 3.1E-16 T 10-11-2016 IPR019489 Clp ATPase, C-terminal CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 PANTHER PTHR11638:SF111 2 707 3.3E-251 T 10-11-2016 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 Gene3D G3DSA:3.40.50.300 140 322 1.4E-42 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 PANTHER PTHR11638 2 707 3.3E-251 T 10-11-2016 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 487 505 - T 10-11-2016 IPR028299 ClpA/B, conserved site 2 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 14 63 9.0E-4 T 10-11-2016 IPR004176 Clp, N-terminal GO:0019538 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 Gene3D G3DSA:1.10.8.60 324 408 5.2E-22 T 10-11-2016 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 Gene3D G3DSA:1.10.1780.10 3 131 8.4E-16 T 10-11-2016 IPR004176 Clp, N-terminal GO:0019538 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 183 297 2.2E-13 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 SMART SM00382 456 620 4.4E-11 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 SMART SM00382 178 322 1.3E-8 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 Pfam PF07724 AAA domain (Cdc48 subfamily) 456 613 9.5E-43 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 SUPERFAMILY SSF52540 139 393 7.89E-61 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 SMART SM01086 619 707 6.3E-22 T 10-11-2016 IPR019489 Clp ATPase, C-terminal CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 SUPERFAMILY SSF52540 410 699 2.55E-59 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 Gene3D G3DSA:1.10.8.60 630 703 6.2E-19 T 10-11-2016 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 Gene3D G3DSA:3.40.50.300 413 629 1.2E-44 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 502 520 1.7E-34 T 10-11-2016 IPR001270 ClpA/B family GO:0005524 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 460 478 1.7E-34 T 10-11-2016 IPR001270 ClpA/B family GO:0005524 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 531 549 1.7E-34 T 10-11-2016 IPR001270 ClpA/B family GO:0005524 CJM129_RS05805 cf5b93bc3a60c5d886cfb4f89521b6ed 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 578 1.7E-34 T 10-11-2016 IPR001270 ClpA/B family GO:0005524 CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 PANTHER PTHR10314:SF110 1 299 1.0E-119 T 10-11-2016 CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 Gene3D G3DSA:3.40.50.1100 131 298 1.9E-67 T 10-11-2016 CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 PANTHER PTHR10314 1 299 1.0E-119 T 10-11-2016 CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 286 6.2E-63 T 10-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 298 2.7E-125 T 10-11-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 Gene3D G3DSA:3.40.50.1100 34 130 1.5E-35 T 10-11-2016 CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 31 44 - T 10-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 29 47 - T 10-11-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 SUPERFAMILY SSF53686 1 298 1.96E-90 T 10-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJM129_RS04395 40b565c15bd6f9fdf86699ea2a80168f 299 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 298 1.1E-134 T 10-11-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 CJM129_RS01305 5856e620b3163bbffb3c8b042c89ccbb 363 Gene3D G3DSA:3.40.50.620 9 112 3.0E-4 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS01305 5856e620b3163bbffb3c8b042c89ccbb 363 PANTHER PTHR36701 1 223 5.8E-62 T 10-11-2016 CJM129_RS01305 5856e620b3163bbffb3c8b042c89ccbb 363 Pfam PF02677 Uncharacterized BCR, COG1636 1 176 1.1E-56 T 10-11-2016 IPR003828 Protein of unknown function DUF208 CJM129_RS08660 86aaf2e2f99f41d98f972a00a370dfe6 146 Pfam PF00075 RNase H 2 135 1.5E-39 T 10-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CJM129_RS08660 86aaf2e2f99f41d98f972a00a370dfe6 146 Gene3D G3DSA:3.30.420.10 2 142 3.3E-46 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS08660 86aaf2e2f99f41d98f972a00a370dfe6 146 Hamap MF_00042 Ribonuclease H [rnhA]. 1 144 25.325 T 10-11-2016 IPR022892 Ribonuclease H GO:0004523 CJM129_RS08660 86aaf2e2f99f41d98f972a00a370dfe6 146 PANTHER PTHR10642 3 135 1.8E-38 T 10-11-2016 CJM129_RS08660 86aaf2e2f99f41d98f972a00a370dfe6 146 SUPERFAMILY SSF53098 1 135 7.08E-46 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 SUPERFAMILY SSF47384 178 245 3.92E-7 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 Gene3D G3DSA:1.10.287.130 185 240 8.9E-5 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 SUPERFAMILY SSF55874 256 395 7.15E-29 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 Gene3D G3DSA:3.30.565.10 258 394 2.2E-28 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 SMART SM00388 191 254 0.0098 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 343 4.4E-6 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 378 4.4E-6 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 396 4.4E-6 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 357 4.4E-6 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 PANTHER PTHR24423 181 394 2.7E-34 T 10-11-2016 CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 SMART SM00387 296 395 6.6E-16 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06360 c87d2dc114ae265cf411e26d5e5f79d5 396 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 394 1.2E-16 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06930 4f047a465124b8befdf1280eedf434fc 216 Gene3D G3DSA:3.40.50.720 5 136 1.7E-32 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06930 4f047a465124b8befdf1280eedf434fc 216 SUPERFAMILY SSF51735 6 133 2.19E-30 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06930 4f047a465124b8befdf1280eedf434fc 216 PANTHER PTHR16254 8 162 8.1E-31 T 10-11-2016 CJM129_RS06930 4f047a465124b8befdf1280eedf434fc 216 Pfam PF02254 TrkA-N domain 8 121 3.8E-23 T 10-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 SUPERFAMILY SSF53335 74 252 1.21E-34 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 SMART SM00138 9 259 1.5E-102 T 10-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 Gene3D G3DSA:1.10.155.10 3 70 1.2E-5 T 10-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 SUPERFAMILY SSF47757 3 73 2.35E-10 T 10-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 Pfam PF03705 CheR methyltransferase, all-alpha domain 11 61 3.4E-6 T 10-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 Gene3D G3DSA:3.40.50.150 73 245 2.9E-42 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 PANTHER PTHR24422 1 239 3.6E-34 T 10-11-2016 CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 5.5E-29 T 10-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 PRINTS PR00996 Glutamate methyltransferase family signature 67 79 5.5E-29 T 10-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 PRINTS PR00996 Glutamate methyltransferase family signature 200 214 5.5E-29 T 10-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 PRINTS PR00996 Glutamate methyltransferase family signature 100 120 5.5E-29 T 10-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 PRINTS PR00996 Glutamate methyltransferase family signature 131 147 5.5E-29 T 10-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 PRINTS PR00996 Glutamate methyltransferase family signature 219 242 5.5E-29 T 10-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJM129_RS04450 97cfc9ed5d2f9a075dee854d75f3f99d 262 Pfam PF01739 CheR methyltransferase, SAM binding domain 75 255 1.0E-49 T 10-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CJM129_RS09360 4aecfb651b1297dd778421a08fb9e449 140 SUPERFAMILY SSF46626 2 139 4.03E-44 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS09360 4aecfb651b1297dd778421a08fb9e449 140 PANTHER PTHR30600:SF7 1 140 8.9E-39 T 10-11-2016 CJM129_RS09360 4aecfb651b1297dd778421a08fb9e449 140 Gene3D G3DSA:1.10.760.10 3 139 1.6E-39 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS09360 4aecfb651b1297dd778421a08fb9e449 140 PANTHER PTHR30600 1 140 8.9E-39 T 10-11-2016 CJM129_RS09360 4aecfb651b1297dd778421a08fb9e449 140 Pfam PF03150 Di-haem cytochrome c peroxidase 5 140 1.4E-41 T 10-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 TIGRFAM TIGR01391 dnaG: DNA primase 1 403 2.0E-140 T 10-11-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 SUPERFAMILY SSF57783 1 97 1.12E-32 T 10-11-2016 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 Pfam PF13155 Toprim-like 251 335 1.5E-20 T 10-11-2016 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 Gene3D G3DSA:3.90.580.10 1 97 7.1E-36 T 10-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 PANTHER PTHR30313 1 382 1.7E-109 T 10-11-2016 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 SMART SM00493 248 319 2.8E-18 T 10-11-2016 IPR006171 Toprim domain CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 Pfam PF01807 CHC2 zinc finger 3 98 2.3E-35 T 10-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 PIRSF PIRSF002811 1 585 4.0E-132 T 10-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 SMART SM00400 33 87 2.7E-31 T 10-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 Gene3D G3DSA:3.90.980.10 108 228 3.0E-27 T 10-11-2016 IPR013264 DNA primase, catalytic core, N-terminal CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 Pfam PF08275 DNA primase catalytic core, N-terminal domain 117 240 1.4E-32 T 10-11-2016 IPR013264 DNA primase, catalytic core, N-terminal CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 Hamap MF_00974 DNA primase [dnaG]. 1 581 26.008 T 10-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 SUPERFAMILY SSF56731 109 409 4.97E-81 T 10-11-2016 CJM129_RS08670 f4138090f7177932daa94098fa5ec315 605 Gene3D G3DSA:3.40.1360.10 230 350 7.0E-40 T 10-11-2016 CJM129_RS07920 11d867e933ebadddbc44fb7c73760e99 221 Gene3D G3DSA:1.10.760.10 195 221 1.8E-22 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07920 11d867e933ebadddbc44fb7c73760e99 221 Gene3D G3DSA:1.10.760.10 15 152 1.8E-22 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07920 11d867e933ebadddbc44fb7c73760e99 221 PANTHER PTHR10422 37 157 2.0E-47 T 10-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CJM129_RS07920 11d867e933ebadddbc44fb7c73760e99 221 SUPERFAMILY SSF46626 183 221 2.91E-21 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07920 11d867e933ebadddbc44fb7c73760e99 221 SUPERFAMILY SSF46626 14 151 2.91E-21 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07920 11d867e933ebadddbc44fb7c73760e99 221 PANTHER PTHR10422:SF23 37 157 2.0E-47 T 10-11-2016 CJM129_RS07920 11d867e933ebadddbc44fb7c73760e99 221 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 220 1.4E-88 T 10-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CJM129_RS07920 11d867e933ebadddbc44fb7c73760e99 221 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 220 7.9E-91 T 10-11-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CJM129_RS02245 17b3741c19028447d04830a7b2b69b62 406 Pfam PF05193 Peptidase M16 inactive domain 161 336 3.3E-21 T 10-11-2016 IPR007863 Peptidase M16, C-terminal CJM129_RS02245 17b3741c19028447d04830a7b2b69b62 406 Gene3D G3DSA:3.30.830.10 224 391 1.4E-22 T 10-11-2016 IPR011237 Peptidase M16 domain GO:0046872 CJM129_RS02245 17b3741c19028447d04830a7b2b69b62 406 PANTHER PTHR11851:SF140 41 336 5.7E-27 T 10-11-2016 CJM129_RS02245 17b3741c19028447d04830a7b2b69b62 406 Gene3D G3DSA:3.30.830.10 38 213 7.4E-21 T 10-11-2016 IPR011237 Peptidase M16 domain GO:0046872 CJM129_RS02245 17b3741c19028447d04830a7b2b69b62 406 PANTHER PTHR11851 41 336 5.7E-27 T 10-11-2016 CJM129_RS02245 17b3741c19028447d04830a7b2b69b62 406 SUPERFAMILY SSF63411 219 392 1.67E-32 T 10-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJM129_RS02245 17b3741c19028447d04830a7b2b69b62 406 SUPERFAMILY SSF63411 13 208 5.59E-27 T 10-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJM129_RS04350 86765ab8cc0cab9c077d8ea8efd2b748 242 Pfam PF00005 ABC transporter 17 165 7.4E-36 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS04350 86765ab8cc0cab9c077d8ea8efd2b748 242 SUPERFAMILY SSF52540 1 235 7.66E-75 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04350 86765ab8cc0cab9c077d8ea8efd2b748 242 PANTHER PTHR24220:SF327 3 241 1.0E-126 T 10-11-2016 CJM129_RS04350 86765ab8cc0cab9c077d8ea8efd2b748 242 PANTHER PTHR24220 3 241 1.0E-126 T 10-11-2016 CJM129_RS04350 86765ab8cc0cab9c077d8ea8efd2b748 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS04350 86765ab8cc0cab9c077d8ea8efd2b748 242 Gene3D G3DSA:3.40.50.300 1 237 1.4E-80 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04350 86765ab8cc0cab9c077d8ea8efd2b748 242 PIRSF PIRSF039085 1 241 1.7E-105 T 10-11-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CJM129_RS04350 86765ab8cc0cab9c077d8ea8efd2b748 242 SMART SM00382 26 213 2.4E-14 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 Gene3D G3DSA:3.30.450.20 89 191 1.7E-22 T 10-11-2016 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 Gene3D G3DSA:1.10.287.950 456 652 9.7E-43 T 10-11-2016 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 PANTHER PTHR32089:SF1 4 347 1.1E-56 T 10-11-2016 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 PANTHER PTHR32089:SF1 446 649 1.1E-56 T 10-11-2016 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 PANTHER PTHR32089 4 347 1.1E-56 T 10-11-2016 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 PANTHER PTHR32089 446 649 1.1E-56 T 10-11-2016 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 Pfam PF02743 Cache domain 48 263 1.3E-24 T 10-11-2016 IPR033479 Double Cache domain 1 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 SUPERFAMILY SSF58104 442 654 8.24E-49 T 10-11-2016 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 SUPERFAMILY SSF58104 337 367 8.24E-49 T 10-11-2016 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 511 586 5.5E-29 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 SMART SM00283 464 655 3.3E-27 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS00730 b0b805fc193a953023682e34486dac15 656 SUPERFAMILY SSF103190 57 200 2.55E-16 T 10-11-2016 IPR029151 Periplasmic sensor domain-like CJM129_RS01235 35bf0f3e1490db0fbbd0dd874541edee 252 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 251 9.1E-83 T 10-11-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CJM129_RS01235 35bf0f3e1490db0fbbd0dd874541edee 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 243 1.3E-26 T 10-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase CJM129_RS01235 35bf0f3e1490db0fbbd0dd874541edee 252 PANTHER PTHR22748 1 252 2.8E-97 T 10-11-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CJM129_RS01235 35bf0f3e1490db0fbbd0dd874541edee 252 Gene3D G3DSA:3.60.10.10 1 251 2.4E-84 T 10-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase CJM129_RS01235 35bf0f3e1490db0fbbd0dd874541edee 252 SUPERFAMILY SSF56219 1 251 4.06E-73 T 10-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase CJM129_RS01235 35bf0f3e1490db0fbbd0dd874541edee 252 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 250 7.5E-80 T 10-11-2016 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 28.733 T 10-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.8E-60 T 10-11-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-16 T 10-11-2016 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 Gene3D G3DSA:3.30.1550.10 2 71 4.5E-37 T 10-11-2016 IPR020784 Ribosomal protein L11, N-terminal CJM129_RS02325 7ce44928be6436688021790b976d669f 141 SUPERFAMILY SSF46906 67 139 7.85E-23 T 10-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 SMART SM00649 9 140 2.4E-77 T 10-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 Gene3D G3DSA:1.10.10.250 72 140 2.4E-25 T 10-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 SUPERFAMILY SSF54747 3 71 2.35E-29 T 10-11-2016 IPR020784 Ribosomal protein L11, N-terminal CJM129_RS02325 7ce44928be6436688021790b976d669f 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 10-11-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 3.8E-20 T 10-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 PANTHER PTHR11661 1 141 7.9E-59 T 10-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CJM129_RS02325 7ce44928be6436688021790b976d669f 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 4.4E-29 T 10-11-2016 IPR020784 Ribosomal protein L11, N-terminal CJM129_RS05590 8e0b092a515036654bc2bb9b96332bad 112 PANTHER PTHR23026:SF101 27 111 4.6E-14 T 10-11-2016 CJM129_RS05590 8e0b092a515036654bc2bb9b96332bad 112 Pfam PF00881 Nitroreductase family 21 88 1.9E-14 T 10-11-2016 IPR029479 Nitroreductase CJM129_RS05590 8e0b092a515036654bc2bb9b96332bad 112 SUPERFAMILY SSF55469 10 108 4.71E-21 T 10-11-2016 IPR000415 Nitroreductase-like GO:0016491 CJM129_RS05590 8e0b092a515036654bc2bb9b96332bad 112 Gene3D G3DSA:3.40.109.10 8 108 4.5E-25 T 10-11-2016 IPR000415 Nitroreductase-like GO:0016491 CJM129_RS05590 8e0b092a515036654bc2bb9b96332bad 112 PANTHER PTHR23026 27 111 4.6E-14 T 10-11-2016 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 SUPERFAMILY SSF50621 241 396 1.21E-50 T 10-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 2 397 40.82 T 10-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 1 396 1.9E-166 T 10-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 60 77 2.1E-25 T 10-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 364 386 2.1E-25 T 10-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 284 302 2.1E-25 T 10-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PRINTS PR01181 Diaminopimelate decarboxylase signature 149 158 2.1E-25 T 10-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 Gene3D G3DSA:3.20.20.10 22 252 2.4E-79 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 23 267 2.7E-63 T 10-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 Gene3D G3DSA:2.40.37.10 253 397 1.7E-49 T 10-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PANTHER PTHR11482:SF5 1 402 3.3E-148 T 10-11-2016 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 SUPERFAMILY SSF51419 11 267 7.71E-78 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 354 367 1.6E-23 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 62 74 1.6E-23 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 1.6E-23 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 42 60 1.6E-23 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 256 275 1.6E-23 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 PANTHER PTHR11482 1 402 3.3E-148 T 10-11-2016 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 211 226 - T 10-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 CJM129_RS01490 beb47d35a1f931c10b603d1ac3843e10 402 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 272 369 1.5E-16 T 10-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS08485 aafd369fb86aacca07ee045bb9f68b52 386 SUPERFAMILY SSF51161 117 368 1.12E-38 T 10-11-2016 IPR011004 Trimeric LpxA-like CJM129_RS08485 aafd369fb86aacca07ee045bb9f68b52 386 Gene3D G3DSA:3.30.60.70 166 206 2.9E-22 T 10-11-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CJM129_RS08485 aafd369fb86aacca07ee045bb9f68b52 386 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 166 206 9.3E-16 T 10-11-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CJM129_RS08485 aafd369fb86aacca07ee045bb9f68b52 386 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 290 321 7.0E-12 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS08485 aafd369fb86aacca07ee045bb9f68b52 386 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 7 164 2.8E-58 T 10-11-2016 CJM129_RS08485 aafd369fb86aacca07ee045bb9f68b52 386 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 21 386 43.551 T 10-11-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 CJM129_RS08485 aafd369fb86aacca07ee045bb9f68b52 386 Gene3D G3DSA:2.160.10.10 214 386 1.2E-32 T 10-11-2016 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 PIRSF PIRSF039088 1 501 1.3E-260 T 10-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 91 1.1E-16 T 10-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 SUPERFAMILY SSF52540 96 370 1.21E-98 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 10-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 PANTHER PTHR15184:SF3 1 485 1.4E-303 T 10-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 PANTHER PTHR15184 1 485 1.4E-303 T 10-11-2016 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 Gene3D G3DSA:3.40.50.300 95 371 3.5E-118 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 5.4E-77 T 10-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 SUPERFAMILY SSF47917 372 499 1.44E-48 T 10-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 501 52.185 T 10-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 2.7E-261 T 10-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 Gene3D G3DSA:2.40.30.20 1 92 2.6E-35 T 10-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 SUPERFAMILY SSF50615 10 93 8.24E-28 T 10-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 496 8.1E-51 T 10-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00535 0aff551cf0db1845f62b30e1bef78dba 501 Gene3D G3DSA:1.20.150.20 372 499 8.8E-54 T 10-11-2016 CJM129_RS02260 be7ea16ba1130230ce4a72fc1dabd16b 198 SMART SM00100 1 114 3.1E-10 T 10-11-2016 IPR000595 Cyclic nucleotide-binding domain CJM129_RS02260 be7ea16ba1130230ce4a72fc1dabd16b 198 PANTHER PTHR24567 3 196 3.3E-32 T 10-11-2016 CJM129_RS02260 be7ea16ba1130230ce4a72fc1dabd16b 198 Pfam PF00027 Cyclic nucleotide-binding domain 15 102 1.5E-17 T 10-11-2016 IPR000595 Cyclic nucleotide-binding domain CJM129_RS02260 be7ea16ba1130230ce4a72fc1dabd16b 198 Pfam PF13545 Crp-like helix-turn-helix domain 134 191 7.7E-8 T 10-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJM129_RS02260 be7ea16ba1130230ce4a72fc1dabd16b 198 Gene3D G3DSA:1.10.10.10 148 189 6.6E-6 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS02260 be7ea16ba1130230ce4a72fc1dabd16b 198 SUPERFAMILY SSF51206 3 126 1.24E-29 T 10-11-2016 IPR018490 Cyclic nucleotide-binding-like CJM129_RS02260 be7ea16ba1130230ce4a72fc1dabd16b 198 Gene3D G3DSA:2.60.120.10 5 127 1.3E-30 T 10-11-2016 IPR014710 RmlC-like jelly roll fold CJM129_RS02260 be7ea16ba1130230ce4a72fc1dabd16b 198 SUPERFAMILY SSF46785 132 196 1.15E-8 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS02240 7348be227410be441a5c5c9499e1edcc 348 Pfam PF04055 Radical SAM superfamily 47 219 2.8E-17 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS02240 7348be227410be441a5c5c9499e1edcc 348 PANTHER PTHR22976:SF29 1 348 3.6E-164 T 10-11-2016 CJM129_RS02240 7348be227410be441a5c5c9499e1edcc 348 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 1 348 52.991 T 10-11-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CJM129_RS02240 7348be227410be441a5c5c9499e1edcc 348 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 2 345 6.0E-152 T 10-11-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 CJM129_RS02240 7348be227410be441a5c5c9499e1edcc 348 PANTHER PTHR22976 1 348 3.6E-164 T 10-11-2016 CJM129_RS02240 7348be227410be441a5c5c9499e1edcc 348 PIRSF PIRSF004762 1 347 4.2E-103 T 10-11-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 CJM129_RS02240 7348be227410be441a5c5c9499e1edcc 348 Gene3D G3DSA:3.20.20.70 3 336 6.6E-59 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS02240 7348be227410be441a5c5c9499e1edcc 348 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 39 345 1.3E-127 T 10-11-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 CJM129_RS02240 7348be227410be441a5c5c9499e1edcc 348 SUPERFAMILY SSF102114 3 334 7.72E-51 T 10-11-2016 CJM129_RS00230 56a5a8686d53426a4028987956ca4556 294 PANTHER PTHR30435 25 266 1.5E-21 T 10-11-2016 CJM129_RS00230 56a5a8686d53426a4028987956ca4556 294 PANTHER PTHR30435:SF15 25 266 1.5E-21 T 10-11-2016 CJM129_RS00230 56a5a8686d53426a4028987956ca4556 294 Pfam PF03963 Flagellar hook capping protein - N-terminal region 24 94 1.2E-16 T 10-11-2016 IPR005648 Flagellar hook capping protein CJM129_RS00230 56a5a8686d53426a4028987956ca4556 294 Pfam PF13860 FlgD Ig-like domain 128 209 1.6E-19 T 10-11-2016 IPR025965 FlgD Ig-like domain CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 Gene3D G3DSA:3.10.580.10 223 363 3.1E-21 T 10-11-2016 CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 SUPERFAMILY SSF54631 223 358 2.81E-30 T 10-11-2016 CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 SMART SM00116 307 355 0.25 T 10-11-2016 IPR000644 CBS domain CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 SMART SM00116 245 294 2.3 T 10-11-2016 IPR000644 CBS domain CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 SMART SM01091 368 447 1.2E-21 T 10-11-2016 IPR005170 Transporter-associated domain CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 SUPERFAMILY SSF56176 363 445 1.53E-15 T 10-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 Pfam PF01595 Domain of unknown function DUF21 28 219 3.9E-44 T 10-11-2016 IPR002550 Domain of unknown function DUF21 CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 Pfam PF03471 Transporter associated domain 369 445 4.2E-16 T 10-11-2016 IPR005170 Transporter-associated domain CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 Pfam PF00571 CBS domain 306 354 9.1E-8 T 10-11-2016 IPR000644 CBS domain CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 Pfam PF00571 CBS domain 237 291 0.0042 T 10-11-2016 IPR000644 CBS domain CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 PANTHER PTHR22777:SF18 23 452 1.6E-163 T 10-11-2016 CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 Gene3D G3DSA:3.30.465.10 364 447 9.6E-19 T 10-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJM129_RS00925 7c0e7095fcc4f3f07d82d9a90dbea1b4 452 PANTHER PTHR22777 23 452 1.6E-163 T 10-11-2016 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 PANTHER PTHR10174 69 339 1.3E-69 T 10-11-2016 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 235 249 - T 10-11-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 SUPERFAMILY SSF51735 5 160 4.59E-48 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 SUPERFAMILY SSF55347 133 325 2.02E-74 T 10-11-2016 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 SMART SM00859 6 123 1.2E-40 T 10-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 122 5.8E-32 T 10-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 Gene3D G3DSA:3.30.360.10 147 321 1.5E-79 T 10-11-2016 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 Gene3D G3DSA:3.40.50.720 1 146 3.2E-59 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 337 4.4E-140 T 10-11-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 323 1.2E-60 T 10-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 PIRSF PIRSF000148 4 342 6.0E-121 T 10-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 PANTHER PTHR10174:SF2 69 339 1.3E-69 T 10-11-2016 CJM129_RS05380 6dbd18b26c8fab28bd604269f45ffba5 343 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 338 38.228 T 10-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS02095 34935eca37e01bfac11c83c0111b6eb1 402 Gene3D G3DSA:3.90.190.20 264 399 7.4E-41 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS02095 34935eca37e01bfac11c83c0111b6eb1 402 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 2 400 1.4E-119 T 10-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS02095 34935eca37e01bfac11c83c0111b6eb1 402 SUPERFAMILY SSF53623 91 196 1.83E-27 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS02095 34935eca37e01bfac11c83c0111b6eb1 402 Gene3D G3DSA:3.40.1190.10 90 227 2.1E-32 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS02095 34935eca37e01bfac11c83c0111b6eb1 402 PANTHER PTHR23135 60 402 5.6E-65 T 10-11-2016 CJM129_RS02095 34935eca37e01bfac11c83c0111b6eb1 402 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 1 402 26.156 T 10-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS02095 34935eca37e01bfac11c83c0111b6eb1 402 Pfam PF08245 Mur ligase middle domain 95 227 3.9E-16 T 10-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 CJM129_RS02095 34935eca37e01bfac11c83c0111b6eb1 402 PANTHER PTHR23135:SF2 60 402 5.6E-65 T 10-11-2016 CJM129_RS02095 34935eca37e01bfac11c83c0111b6eb1 402 SUPERFAMILY SSF53244 265 401 1.97E-34 T 10-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 CJM129_RS05715 da7c078e00c5a3197b8b48f66240d72f 170 Pfam PF04390 Lipopolysaccharide-assembly 8 156 2.8E-7 T 10-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CJM129_RS00075 34dae4870d573b03e8ec998021ba192a 224 PIRSF PIRSF006293 1 224 3.8E-88 T 10-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CJM129_RS00075 34dae4870d573b03e8ec998021ba192a 224 SUPERFAMILY SSF52402 3 222 7.06E-60 T 10-11-2016 CJM129_RS00075 34dae4870d573b03e8ec998021ba192a 224 Gene3D G3DSA:3.40.50.620 2 223 3.9E-89 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS00075 34dae4870d573b03e8ec998021ba192a 224 Pfam PF06508 Queuosine biosynthesis protein QueC 4 214 3.9E-80 T 10-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CJM129_RS00075 34dae4870d573b03e8ec998021ba192a 224 PANTHER PTHR11587 2 222 3.1E-80 T 10-11-2016 CJM129_RS00075 34dae4870d573b03e8ec998021ba192a 224 PANTHER PTHR11587:SF3 2 222 3.1E-80 T 10-11-2016 CJM129_RS00075 34dae4870d573b03e8ec998021ba192a 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 5 207 4.8E-62 T 10-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CJM129_RS00075 34dae4870d573b03e8ec998021ba192a 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 220 52.432 T 10-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 PANTHER PTHR23504 3 381 1.6E-55 T 10-11-2016 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 Gene3D G3DSA:1.20.1250.20 5 198 1.5E-31 T 10-11-2016 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 Gene3D G3DSA:1.20.1250.20 208 385 2.5E-28 T 10-11-2016 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 SUPERFAMILY SSF103473 5 386 1.31E-59 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 PANTHER PTHR23504:SF14 3 381 1.6E-55 T 10-11-2016 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 PRINTS PR01035 Tetracycline resistance protein signature 136 158 6.5E-6 T 10-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 PRINTS PR01035 Tetracycline resistance protein signature 17 33 6.5E-6 T 10-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 PRINTS PR01035 Tetracycline resistance protein signature 246 266 6.5E-6 T 10-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 PRINTS PR01035 Tetracycline resistance protein signature 106 127 6.5E-6 T 10-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 Pfam PF07690 Major Facilitator Superfamily 211 383 1.5E-20 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS06535 c80247cbacf722941e8dcea8fee81667 394 Pfam PF07690 Major Facilitator Superfamily 12 200 1.3E-23 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 PANTHER PTHR32039:SF7 1 176 3.5E-156 T 10-11-2016 IPR004482 Mg chelatase-related protein CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 PANTHER PTHR32039 1 176 3.5E-156 T 10-11-2016 CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 Gene3D G3DSA:3.30.230.10 14 161 1.1E-22 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 Pfam PF01078 Magnesium chelatase, subunit ChlI 198 400 7.4E-74 T 10-11-2016 IPR000523 Magnesium chelatase ChlI domain CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 Pfam PF13541 Subunit ChlI of Mg-chelatase 18 134 4.3E-34 T 10-11-2016 CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 Gene3D G3DSA:3.40.50.300 198 394 6.6E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 SUPERFAMILY SSF52540 197 498 5.63E-37 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 PANTHER PTHR32039:SF7 198 501 3.5E-156 T 10-11-2016 IPR004482 Mg chelatase-related protein CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 407 498 8.3E-22 T 10-11-2016 IPR025158 Mg chelatase-related protein, C-terminal domain CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 15 498 5.5E-134 T 10-11-2016 IPR004482 Mg chelatase-related protein CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 SUPERFAMILY SSF54211 15 162 2.69E-22 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS00960 d1698276b575194122eaac0eb4e1cf12 501 PANTHER PTHR32039 198 501 3.5E-156 T 10-11-2016 CJM129_RS01800 d255abd25acf6ec84b0448e788bef56f 570 SUPERFAMILY SSF52540 309 564 1.37E-41 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01800 d255abd25acf6ec84b0448e788bef56f 570 Gene3D G3DSA:3.40.50.300 302 517 2.8E-44 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01800 d255abd25acf6ec84b0448e788bef56f 570 PANTHER PTHR23077:SF49 303 531 5.5E-23 T 10-11-2016 CJM129_RS01800 d255abd25acf6ec84b0448e788bef56f 570 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 355 486 1.9E-28 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS01800 d255abd25acf6ec84b0448e788bef56f 570 SMART SM00382 351 489 1.5E-13 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS01800 d255abd25acf6ec84b0448e788bef56f 570 PANTHER PTHR23077 303 531 5.5E-23 T 10-11-2016 CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 PANTHER PTHR30303 1 324 5.7E-121 T 10-11-2016 CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 PIRSF PIRSF005644 1 324 4.6E-117 T 10-11-2016 IPR011854 Hydrogenase expression/formation protein HypE CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 Gene3D G3DSA:3.30.1330.10 16 144 1.6E-21 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 154 302 7.4E-25 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 PANTHER PTHR30303:SF0 1 324 5.7E-121 T 10-11-2016 CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 3 324 3.9E-130 T 10-11-2016 IPR011854 Hydrogenase expression/formation protein HypE CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 36 144 1.3E-16 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 Gene3D G3DSA:3.90.650.10 152 309 4.2E-20 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 SUPERFAMILY SSF56042 151 319 1.26E-35 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS03030 6e423256cd66613f2b6a1f69ee7187c6 324 SUPERFAMILY SSF55326 3 144 1.59E-27 T 10-11-2016 CJM129_RS05695 22b39f745723b68fb2bac1493f62cdb3 131 PANTHER PTHR35024:SF2 11 120 5.1E-29 T 10-11-2016 CJM129_RS05695 22b39f745723b68fb2bac1493f62cdb3 131 Pfam PF04519 Polymer-forming cytoskeletal 20 115 9.7E-24 T 10-11-2016 IPR007607 Protein of unknown function DUF583 CJM129_RS05695 22b39f745723b68fb2bac1493f62cdb3 131 PANTHER PTHR35024 11 120 5.1E-29 T 10-11-2016 CJM129_RS05955 038cc193163733cbbba7d303160f6860 291 Pfam PF06002 Alpha-2,3-sialyltransferase (CST-I) 2 291 6.9E-108 T 10-11-2016 IPR009251 Alpha-2,3-sialyltransferase CJM129_RS05955 038cc193163733cbbba7d303160f6860 291 Gene3D G3DSA:3.90.1480.10 1 268 3.0E-117 T 10-11-2016 CJM129_RS05955 038cc193163733cbbba7d303160f6860 291 SUPERFAMILY SSF102414 1 256 3.4E-119 T 10-11-2016 IPR009251 Alpha-2,3-sialyltransferase CJM129_RS04675 058682294e902151aab9656bbaa060db 202 Gene3D G3DSA:3.40.470.10 28 201 2.4E-24 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS04675 058682294e902151aab9656bbaa060db 202 SUPERFAMILY SSF52141 28 202 5.56E-28 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS04675 058682294e902151aab9656bbaa060db 202 Pfam PF03167 Uracil DNA glycosylase superfamily 59 196 1.7E-11 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS00980 6ca0d4b0e58f6505f187c07755a6c579 190 SUPERFAMILY SSF55620 3 183 6.15E-80 T 10-11-2016 CJM129_RS00980 6ca0d4b0e58f6505f187c07755a6c579 190 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 183 40.956 T 10-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CJM129_RS00980 6ca0d4b0e58f6505f187c07755a6c579 190 Pfam PF01227 GTP cyclohydrolase I 6 182 8.6E-79 T 10-11-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CJM129_RS00980 6ca0d4b0e58f6505f187c07755a6c579 190 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 183 1.1E-78 T 10-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CJM129_RS00980 6ca0d4b0e58f6505f187c07755a6c579 190 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 10-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CJM129_RS00980 6ca0d4b0e58f6505f187c07755a6c579 190 PANTHER PTHR11109 6 185 4.2E-117 T 10-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 CJM129_RS00980 6ca0d4b0e58f6505f187c07755a6c579 190 Gene3D G3DSA:3.30.1130.10 55 184 8.5E-62 T 10-11-2016 CJM129_RS00980 6ca0d4b0e58f6505f187c07755a6c579 190 Gene3D G3DSA:1.10.286.10 2 52 2.3E-23 T 10-11-2016 CJM129_RS08185 8be300f7a5704a3d7092d1471e07dfec 246 Pfam PF02682 Allophanate hydrolase subunit 1 4 208 3.7E-69 T 10-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D CJM129_RS08185 8be300f7a5704a3d7092d1471e07dfec 246 Gene3D G3DSA:2.40.100.10 93 231 1.7E-47 T 10-11-2016 IPR029000 Cyclophilin-like domain CJM129_RS08185 8be300f7a5704a3d7092d1471e07dfec 246 PANTHER PTHR34698:SF2 1 240 1.0E-78 T 10-11-2016 CJM129_RS08185 8be300f7a5704a3d7092d1471e07dfec 246 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 216 2.7E-58 T 10-11-2016 IPR010016 KipI family CJM129_RS08185 8be300f7a5704a3d7092d1471e07dfec 246 PANTHER PTHR34698 1 240 1.0E-78 T 10-11-2016 CJM129_RS08185 8be300f7a5704a3d7092d1471e07dfec 246 Gene3D G3DSA:3.30.1360.40 4 86 1.7E-16 T 10-11-2016 IPR024946 Arginine repressor C-terminal-like domain CJM129_RS08185 8be300f7a5704a3d7092d1471e07dfec 246 SUPERFAMILY SSF160467 5 98 2.48E-13 T 10-11-2016 CJM129_RS08185 8be300f7a5704a3d7092d1471e07dfec 246 SMART SM00796 2 208 1.1E-89 T 10-11-2016 IPR003833 Carboxyltransferase domain, subdomain C and D CJM129_RS08185 8be300f7a5704a3d7092d1471e07dfec 246 SUPERFAMILY SSF50891 93 224 2.2E-39 T 10-11-2016 IPR029000 Cyclophilin-like domain CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 SUPERFAMILY SSF55174 2 208 7.59E-68 T 10-11-2016 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 Gene3D G3DSA:1.10.1050.10 1 101 1.5E-41 T 10-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 1.8E-26 T 10-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 SMART SM01390 3 97 2.2E-45 T 10-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 PANTHER PTHR11831:SF4 1 208 1.5E-75 T 10-11-2016 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 SMART SM00363 98 162 1.0E-18 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 Gene3D G3DSA:3.10.290.10 102 199 2.0E-30 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 10-11-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.428 T 10-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 5.2E-81 T 10-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 PANTHER PTHR11831 1 208 1.5E-75 T 10-11-2016 IPR022801 Ribosomal protein S4/S9 CJM129_RS08430 055864e8776ed54d8a1ec1bd2f6acfb4 208 Pfam PF01479 S4 domain 98 145 8.1E-21 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS06035 d14e5167749cca543306686db205a67f 509 SUPERFAMILY SSF52540 32 226 1.0E-55 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06035 d14e5167749cca543306686db205a67f 509 PANTHER PTHR11669:SF0 1 286 5.8E-129 T 10-11-2016 CJM129_RS06035 d14e5167749cca543306686db205a67f 509 Gene3D G3DSA:3.40.50.300 14 165 3.2E-61 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06035 d14e5167749cca543306686db205a67f 509 PANTHER PTHR11669 1 286 5.8E-129 T 10-11-2016 CJM129_RS06035 d14e5167749cca543306686db205a67f 509 Gene3D G3DSA:1.10.8.60 166 241 1.6E-29 T 10-11-2016 CJM129_RS06035 d14e5167749cca543306686db205a67f 509 SMART SM00382 36 178 3.2E-5 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS06035 d14e5167749cca543306686db205a67f 509 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 340 1.7E-118 T 10-11-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CJM129_RS06035 d14e5167749cca543306686db205a67f 509 Pfam PF13177 DNA polymerase III, delta subunit 19 177 2.3E-44 T 10-11-2016 CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 Gene3D G3DSA:1.10.287.110 2 90 1.6E-34 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 Gene3D G3DSA:2.60.260.20 121 197 3.1E-14 T 10-11-2016 CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 SUPERFAMILY SSF46565 3 111 3.79E-35 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 Gene3D G3DSA:2.60.260.20 202 280 2.3E-16 T 10-11-2016 CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 PANTHER PTHR24078:SF190 4 100 2.1E-73 T 10-11-2016 CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 PANTHER PTHR24078:SF190 116 294 2.1E-73 T 10-11-2016 CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 SUPERFAMILY SSF49493 202 286 5.62E-17 T 10-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 PRINTS PR00625 DnaJ domain signature 59 78 1.7E-29 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 PRINTS PR00625 DnaJ domain signature 5 23 1.7E-29 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 PRINTS PR00625 DnaJ domain signature 23 38 1.7E-29 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 PRINTS PR00625 DnaJ domain signature 39 59 1.7E-29 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 SUPERFAMILY SSF49493 132 210 1.27E-14 T 10-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 Pfam PF01556 DnaJ C terminal domain 135 279 1.6E-32 T 10-11-2016 IPR002939 Chaperone DnaJ, C-terminal CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 SMART SM00271 2 59 4.7E-31 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 PANTHER PTHR24078 4 100 2.1E-73 T 10-11-2016 CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 PANTHER PTHR24078 116 294 2.1E-73 T 10-11-2016 CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 ProSitePatterns PS00636 Nt-dnaJ domain signature. 44 63 - T 10-11-2016 IPR018253 DnaJ domain, conserved site CJM129_RS06400 d8f9dfc98f84f646cf859d9fc174b0dc 297 Pfam PF00226 DnaJ domain 4 64 4.1E-28 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 607 6.6E-211 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 83 101 - T 10-11-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 101 6.4E-17 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 517 530 6.4E-17 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 317 336 6.4E-17 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 119 6.4E-17 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 224 237 6.4E-17 T 10-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 437 536 4.4E-22 T 10-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 Gene3D G3DSA:3.20.20.10 62 315 7.9E-49 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 SUPERFAMILY SSF50621 433 539 3.35E-14 T 10-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 Gene3D G3DSA:2.40.37.10 316 340 8.3E-17 T 10-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 Gene3D G3DSA:2.40.37.10 434 557 8.3E-17 T 10-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PANTHER PTHR11482:SF36 418 571 1.9E-144 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PANTHER PTHR11482:SF36 4 350 1.9E-144 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 66 328 5.0E-39 T 10-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 SUPERFAMILY SSF51419 52 329 1.54E-52 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01180 Arginine decarboxylase signature 468 493 3.3E-39 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01180 Arginine decarboxylase signature 307 324 3.3E-39 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01180 Arginine decarboxylase signature 181 203 3.3E-39 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01180 Arginine decarboxylase signature 130 145 3.3E-39 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01180 Arginine decarboxylase signature 517 538 3.3E-39 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01180 Arginine decarboxylase signature 51 66 3.3E-39 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01180 Arginine decarboxylase signature 75 89 3.3E-39 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PRINTS PR01180 Arginine decarboxylase signature 443 464 3.3E-39 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PANTHER PTHR11482 418 571 1.9E-144 T 10-11-2016 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PANTHER PTHR11482 4 350 1.9E-144 T 10-11-2016 CJM129_RS03700 0b6015df7cb29c6dc2da2c09ecf32d8b 611 PIRSF PIRSF001336 1 609 1.7E-213 T 10-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CJM129_RS01450 827413927c2c12d7d462419bfcda29ac 380 Pfam PF00155 Aminotransferase class I and II 35 378 8.5E-43 T 10-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJM129_RS01450 827413927c2c12d7d462419bfcda29ac 380 SUPERFAMILY SSF53383 7 380 1.55E-78 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS01450 827413927c2c12d7d462419bfcda29ac 380 PANTHER PTHR13693 1 380 1.7E-132 T 10-11-2016 CJM129_RS01450 827413927c2c12d7d462419bfcda29ac 380 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 236 245 - T 10-11-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CJM129_RS01450 827413927c2c12d7d462419bfcda29ac 380 Gene3D G3DSA:3.90.1150.10 273 378 3.0E-20 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS01450 827413927c2c12d7d462419bfcda29ac 380 PANTHER PTHR13693:SF59 1 380 1.7E-132 T 10-11-2016 CJM129_RS01450 827413927c2c12d7d462419bfcda29ac 380 Gene3D G3DSA:3.40.640.10 68 272 4.2E-64 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS06310 aa00e83aa23730a9cb79a5470691a12d 268 PANTHER PTHR30213 10 268 1.3E-36 T 10-11-2016 CJM129_RS06310 aa00e83aa23730a9cb79a5470691a12d 268 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 12 251 3.7E-41 T 10-11-2016 IPR017039 Virulence factor BrkB CJM129_RS06310 aa00e83aa23730a9cb79a5470691a12d 268 PANTHER PTHR30213:SF0 10 268 1.3E-36 T 10-11-2016 CJM129_RS06310 aa00e83aa23730a9cb79a5470691a12d 268 PIRSF PIRSF035875 1 268 1.3E-50 T 10-11-2016 IPR017039 Virulence factor BrkB CJM129_RS06310 aa00e83aa23730a9cb79a5470691a12d 268 Pfam PF03631 Virulence factor BrkB 14 253 9.1E-46 T 10-11-2016 IPR017039 Virulence factor BrkB CJM129_RS09125 ca0cb179463d8ddbede8ed00afaf5ef4 356 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 355 69.688 T 10-11-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS09125 ca0cb179463d8ddbede8ed00afaf5ef4 356 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 355 4.9E-136 T 10-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS09125 ca0cb179463d8ddbede8ed00afaf5ef4 356 PIRSF PIRSF006004 3 356 8.6E-137 T 10-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS09125 ca0cb179463d8ddbede8ed00afaf5ef4 356 PANTHER PTHR30544 1 356 6.2E-146 T 10-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS09125 ca0cb179463d8ddbede8ed00afaf5ef4 356 Pfam PF04055 Radical SAM superfamily 117 285 7.5E-15 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS09125 ca0cb179463d8ddbede8ed00afaf5ef4 356 SUPERFAMILY SSF102114 111 312 2.35E-12 T 10-11-2016 CJM129_RS09125 ca0cb179463d8ddbede8ed00afaf5ef4 356 SMART SM00729 112 327 0.0035 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS09125 ca0cb179463d8ddbede8ed00afaf5ef4 356 PANTHER PTHR30544:SF5 1 356 6.2E-146 T 10-11-2016 CJM129_RS09125 ca0cb179463d8ddbede8ed00afaf5ef4 356 Gene3D G3DSA:3.20.20.70 114 329 1.1E-12 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS01670 de88af91288146abcdfc4fbe4d195369 140 Pfam PF13690 Chemotaxis phosphatase CheX 34 114 2.1E-6 T 10-11-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- CJM129_RS01670 de88af91288146abcdfc4fbe4d195369 140 SUPERFAMILY SSF103039 23 111 1.06E-8 T 10-11-2016 IPR028976 CheC-like domain CJM129_RS01670 de88af91288146abcdfc4fbe4d195369 140 Gene3D G3DSA:3.40.1550.10 32 109 6.3E-6 T 10-11-2016 IPR028976 CheC-like domain CJM129_RS02590 db08a76d47da01bc624258cde7d43399 297 Gene3D G3DSA:1.10.600.10 2 294 3.6E-88 T 10-11-2016 IPR008949 Isoprenoid synthase domain CJM129_RS02590 db08a76d47da01bc624258cde7d43399 297 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 63 77 - T 10-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 CJM129_RS02590 db08a76d47da01bc624258cde7d43399 297 PANTHER PTHR12001 29 297 1.7E-73 T 10-11-2016 IPR017446 Polyprenyl synthetase-related CJM129_RS02590 db08a76d47da01bc624258cde7d43399 297 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 181 193 - T 10-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 CJM129_RS02590 db08a76d47da01bc624258cde7d43399 297 SUPERFAMILY SSF48576 26 294 1.28E-73 T 10-11-2016 IPR008949 Isoprenoid synthase domain CJM129_RS02590 db08a76d47da01bc624258cde7d43399 297 Pfam PF00348 Polyprenyl synthetase 25 245 6.4E-59 T 10-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 CJM129_RS08665 8034dcfbb0a1588ea81c05872e10f482 328 Gene3D G3DSA:1.25.40.10 70 172 5.5E-13 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS08665 8034dcfbb0a1588ea81c05872e10f482 328 SUPERFAMILY SSF48452 62 163 3.57E-13 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS04335 e7c1f13826cd52eca1683d8437af0ce5 189 PANTHER PTHR11019 1 167 2.1E-39 T 10-11-2016 CJM129_RS04335 e7c1f13826cd52eca1683d8437af0ce5 189 SUPERFAMILY SSF52317 3 186 6.96E-41 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS04335 e7c1f13826cd52eca1683d8437af0ce5 189 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 181 1.0E-63 T 10-11-2016 IPR006287 DJ-1 CJM129_RS04335 e7c1f13826cd52eca1683d8437af0ce5 189 Pfam PF01965 DJ-1/PfpI family 3 168 4.0E-36 T 10-11-2016 IPR002818 DJ-1/PfpI CJM129_RS04335 e7c1f13826cd52eca1683d8437af0ce5 189 Gene3D G3DSA:3.40.50.880 1 187 2.0E-49 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS04335 e7c1f13826cd52eca1683d8437af0ce5 189 PANTHER PTHR11019:SF4 1 167 2.1E-39 T 10-11-2016 CJM129_RS00885 6b298255f734e5cf091ae0c8be3596b8 334 PIRSF PIRSF002825 12 334 6.4E-83 T 10-11-2016 IPR026045 Ferric binding protein CJM129_RS00885 6b298255f734e5cf091ae0c8be3596b8 334 Pfam PF13416 Bacterial extracellular solute-binding protein 33 304 1.3E-26 T 10-11-2016 CJM129_RS00885 6b298255f734e5cf091ae0c8be3596b8 334 Gene3D G3DSA:3.40.190.10 119 265 3.9E-46 T 10-11-2016 CJM129_RS00885 6b298255f734e5cf091ae0c8be3596b8 334 PANTHER PTHR30006:SF4 17 331 7.4E-108 T 10-11-2016 CJM129_RS00885 6b298255f734e5cf091ae0c8be3596b8 334 Gene3D G3DSA:3.40.190.10 266 321 4.4E-36 T 10-11-2016 CJM129_RS00885 6b298255f734e5cf091ae0c8be3596b8 334 Gene3D G3DSA:3.40.190.10 1 115 4.4E-36 T 10-11-2016 CJM129_RS00885 6b298255f734e5cf091ae0c8be3596b8 334 PANTHER PTHR30006 17 331 7.4E-108 T 10-11-2016 CJM129_RS00885 6b298255f734e5cf091ae0c8be3596b8 334 SUPERFAMILY SSF53850 19 330 2.46E-79 T 10-11-2016 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 SUPERFAMILY SSF52540 2 436 2.47E-78 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 PANTHER PTHR11262:SF3 2 104 1.0E-178 T 10-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 Gene3D G3DSA:1.10.8.60 330 439 8.9E-36 T 10-11-2016 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 PANTHER PTHR11262 2 104 1.0E-178 T 10-11-2016 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 SMART SM01086 331 425 1.1E-20 T 10-11-2016 IPR019489 Clp ATPase, C-terminal CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 439 6.5E-190 T 10-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 Pfam PF07724 AAA domain (Cdc48 subfamily) 194 324 4.8E-37 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 Pfam PF07724 AAA domain (Cdc48 subfamily) 51 114 2.5E-7 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 Gene3D G3DSA:3.40.50.300 240 327 3.5E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 Gene3D G3DSA:3.40.50.300 3 109 3.5E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 331 401 2.6E-7 T 10-11-2016 IPR019489 Clp ATPase, C-terminal CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 439 40.582 T 10-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 Gene3D G3DSA:1.10.8.10 208 238 9.7E-23 T 10-11-2016 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 Gene3D G3DSA:1.10.8.10 110 175 9.7E-23 T 10-11-2016 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 SMART SM00382 48 328 5.4E-11 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 PANTHER PTHR11262 213 439 1.0E-178 T 10-11-2016 CJM129_RS03205 b19aaa0474cac6d8f465bf7ab7f9f986 439 PANTHER PTHR11262:SF3 213 439 1.0E-178 T 10-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CJM129_RS02980 244d64099b9209fdb146014c9c210ff6 362 PANTHER PTHR30425:SF2 129 362 2.1E-83 T 10-11-2016 CJM129_RS02980 244d64099b9209fdb146014c9c210ff6 362 SUPERFAMILY SSF161098 121 353 7.33E-35 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02980 244d64099b9209fdb146014c9c210ff6 362 PANTHER PTHR30425 129 362 2.1E-83 T 10-11-2016 CJM129_RS02980 244d64099b9209fdb146014c9c210ff6 362 Gene3D G3DSA:1.10.3720.10 23 44 4.3E-44 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02980 244d64099b9209fdb146014c9c210ff6 362 Gene3D G3DSA:1.10.3720.10 118 358 4.3E-44 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02980 244d64099b9209fdb146014c9c210ff6 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 361 1.6E-20 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02980 244d64099b9209fdb146014c9c210ff6 362 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 120 357 8.4E-65 T 10-11-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CJM129_RS02980 244d64099b9209fdb146014c9c210ff6 362 Pfam PF11812 Domain of unknown function (DUF3333) 4 54 1.1E-6 T 10-11-2016 IPR024573 Domain of unknown function DUF3333 CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 SUPERFAMILY SSF53335 2 494 5.05E-114 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 Pfam PF12161 HsdM N-terminal domain 2 140 1.2E-13 T 10-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 Gene3D G3DSA:3.40.50.150 175 405 3.7E-38 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 290 296 - T 10-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 Pfam PF02384 N-6 DNA Methylase 153 459 2.7E-66 T 10-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 173 189 8.4E-22 T 10-11-2016 CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 197 211 8.4E-22 T 10-11-2016 CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 287 299 8.4E-22 T 10-11-2016 CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 314 338 8.4E-22 T 10-11-2016 CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 PANTHER PTHR30195:SF2 132 462 1.0E-60 T 10-11-2016 CJM129_RS08240 b94637d21a3cbe037be0db8bbb2cec40 495 PANTHER PTHR30195 132 462 1.0E-60 T 10-11-2016 CJM129_RS02400 56781ab2cdf3b8fecd14060ceb9a7a54 161 Gene3D G3DSA:3.30.428.10 14 156 6.2E-29 T 10-11-2016 IPR011146 HIT-like domain GO:0003824 CJM129_RS02400 56781ab2cdf3b8fecd14060ceb9a7a54 161 PANTHER PTHR23089:SF16 1 153 1.1E-49 T 10-11-2016 CJM129_RS02400 56781ab2cdf3b8fecd14060ceb9a7a54 161 SUPERFAMILY SSF54197 1 151 9.43E-35 T 10-11-2016 IPR011146 HIT-like domain GO:0003824 CJM129_RS02400 56781ab2cdf3b8fecd14060ceb9a7a54 161 Pfam PF01230 HIT domain 37 125 4.9E-8 T 10-11-2016 IPR001310 Histidine triad (HIT) protein CJM129_RS02400 56781ab2cdf3b8fecd14060ceb9a7a54 161 PANTHER PTHR23089 1 153 1.1E-49 T 10-11-2016 IPR001310 Histidine triad (HIT) protein CJM129_RS04010 228c559cfe8f1870ae09a8b1c2d1bb34 138 PIRSF PIRSF015875 1 138 2.3E-52 T 10-11-2016 IPR007418 Protein of unknown function DUF474 CJM129_RS01545 28c061f9d6ddbb0cdc7877a435eb2e3a 387 Pfam PF13742 OB-fold nucleic acid binding domain 4 93 2.2E-20 T 10-11-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CJM129_RS01545 28c061f9d6ddbb0cdc7877a435eb2e3a 387 PANTHER PTHR30008 1 341 1.1E-114 T 10-11-2016 CJM129_RS01545 28c061f9d6ddbb0cdc7877a435eb2e3a 387 Pfam PF02601 Exonuclease VII, large subunit 117 351 2.2E-67 T 10-11-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CJM129_RS01545 28c061f9d6ddbb0cdc7877a435eb2e3a 387 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 4 386 6.0E-116 T 10-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CJM129_RS01545 28c061f9d6ddbb0cdc7877a435eb2e3a 387 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 1 387 24.184 T 10-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CJM129_RS01545 28c061f9d6ddbb0cdc7877a435eb2e3a 387 PANTHER PTHR30008:SF0 1 341 1.1E-114 T 10-11-2016 CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 5.1E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.1E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 5.1E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.1E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 5.1E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 Gene3D G3DSA:3.40.50.720 2 232 4.2E-58 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 Pfam PF00106 short chain dehydrogenase 2 187 2.0E-48 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PANTHER PTHR24322:SF392 6 132 2.5E-59 T 10-11-2016 CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PANTHER PTHR24322 6 132 2.5E-59 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 10-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 SUPERFAMILY SSF51735 1 224 2.12E-54 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.0E-5 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 3.0E-5 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 3.0E-5 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PANTHER PTHR24322:SF392 148 180 2.5E-59 T 10-11-2016 CJM129_RS04025 e071c61407c29b36c34fa3919d4b0155 249 PANTHER PTHR24322 148 180 2.5E-59 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS08895 19ef19b80a27b8e12551a3419c716118 379 Gene3D G3DSA:1.10.443.10 204 360 4.0E-27 T 10-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJM129_RS08895 19ef19b80a27b8e12551a3419c716118 379 Pfam PF00589 Phage integrase family 204 359 4.4E-21 T 10-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJM129_RS08895 19ef19b80a27b8e12551a3419c716118 379 Gene3D G3DSA:1.10.150.130 111 190 8.4E-10 T 10-11-2016 IPR023109 Integrase/recombinase, N-terminal CJM129_RS08895 19ef19b80a27b8e12551a3419c716118 379 PANTHER PTHR30349:SF20 91 357 8.4E-34 T 10-11-2016 CJM129_RS08895 19ef19b80a27b8e12551a3419c716118 379 PANTHER PTHR30349 91 357 8.4E-34 T 10-11-2016 CJM129_RS08895 19ef19b80a27b8e12551a3419c716118 379 SUPERFAMILY SSF56349 99 363 2.83E-47 T 10-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJM129_RS08125 349dd530e2206ddadedfd93cc258c5b7 201 Gene3D G3DSA:3.40.50.300 7 198 1.9E-54 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08125 349dd530e2206ddadedfd93cc258c5b7 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 7 185 3.0E-44 T 10-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CJM129_RS08125 349dd530e2206ddadedfd93cc258c5b7 201 Pfam PF01121 Dephospho-CoA kinase 7 182 1.9E-42 T 10-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CJM129_RS08125 349dd530e2206ddadedfd93cc258c5b7 201 SUPERFAMILY SSF52540 5 195 3.43E-27 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08125 349dd530e2206ddadedfd93cc258c5b7 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 21.983 T 10-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 CJM129_RS08125 349dd530e2206ddadedfd93cc258c5b7 201 PANTHER PTHR10695 10 198 3.7E-47 T 10-11-2016 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 PANTHER PTHR30194 3 151 1.4E-44 T 10-11-2016 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 147 - T 10-11-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 42.531 T 10-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 4.6E-55 T 10-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 9.8E-57 T 10-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 Gene3D G3DSA:3.30.420.10 2 155 2.1E-51 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 2.7E-21 T 10-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 2.7E-21 T 10-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.7E-21 T 10-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.7E-21 T 10-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 2.7E-21 T 10-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJM129_RS09220 8e25cac358a091272dbcca3d18c3790f 158 SUPERFAMILY SSF53098 2 154 4.05E-42 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS05915 b267a40081afb2d7ce36485f718b35df 328 SUPERFAMILY SSF51735 1 327 8.76E-86 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05915 b267a40081afb2d7ce36485f718b35df 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 257 2.9E-52 T 10-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CJM129_RS05915 b267a40081afb2d7ce36485f718b35df 328 PANTHER PTHR10366 2 327 4.7E-105 T 10-11-2016 CJM129_RS05915 b267a40081afb2d7ce36485f718b35df 328 Gene3D G3DSA:3.90.25.10 176 327 2.3E-40 T 10-11-2016 CJM129_RS05915 b267a40081afb2d7ce36485f718b35df 328 Gene3D G3DSA:3.40.50.720 1 175 1.8E-49 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05915 b267a40081afb2d7ce36485f718b35df 328 PANTHER PTHR10366:SF39 2 327 4.7E-105 T 10-11-2016 CJM129_RS05915 b267a40081afb2d7ce36485f718b35df 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 327 1.4E-153 T 10-11-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 CJM129_RS02935 7d9b0cf1f304f7cc206e60ada146cf09 390 Gene3D G3DSA:2.40.50.100 179 211 7.2E-22 T 10-11-2016 CJM129_RS02935 7d9b0cf1f304f7cc206e60ada146cf09 390 Gene3D G3DSA:2.40.50.100 57 90 7.2E-22 T 10-11-2016 CJM129_RS02935 7d9b0cf1f304f7cc206e60ada146cf09 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 261 1.4E-18 T 10-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJM129_RS02935 7d9b0cf1f304f7cc206e60ada146cf09 390 PANTHER PTHR30572:SF3 5 375 6.5E-67 T 10-11-2016 CJM129_RS02935 7d9b0cf1f304f7cc206e60ada146cf09 390 SUPERFAMILY SSF111369 44 236 3.14E-25 T 10-11-2016 CJM129_RS02935 7d9b0cf1f304f7cc206e60ada146cf09 390 PANTHER PTHR30572 5 375 6.5E-67 T 10-11-2016 CJM129_RS02935 7d9b0cf1f304f7cc206e60ada146cf09 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 376 1.9E-51 T 10-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 544 553 - T 10-11-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 PANTHER PTHR11993 359 557 1.3E-160 T 10-11-2016 CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 PANTHER PTHR11993 188 252 1.3E-160 T 10-11-2016 CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 SUPERFAMILY SSF56762 1 553 1.02E-165 T 10-11-2016 IPR029014 NiFe hydrogenase-like CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 PANTHER PTHR11993:SF11 188 252 1.3E-160 T 10-11-2016 CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 10-11-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 PANTHER PTHR11993:SF11 1 117 1.3E-160 T 10-11-2016 CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 PANTHER PTHR11993:SF11 359 557 1.3E-160 T 10-11-2016 CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 Gene3D G3DSA:1.10.645.10 1 553 3.8E-196 T 10-11-2016 IPR029014 NiFe hydrogenase-like CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 Pfam PF00374 Nickel-dependent hydrogenase 40 553 4.4E-207 T 10-11-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CJM129_RS06580 3dc1cc79170af7b6093615da546b4487 571 PANTHER PTHR11993 1 117 1.3E-160 T 10-11-2016 CJM129_RS04175 c5d73688d6ba026325145f12cdb3906d 220 Gene3D G3DSA:3.40.30.10 27 219 4.5E-38 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS04175 c5d73688d6ba026325145f12cdb3906d 220 PANTHER PTHR35891 2 220 4.4E-33 T 10-11-2016 CJM129_RS04175 c5d73688d6ba026325145f12cdb3906d 220 PANTHER PTHR35891:SF1 2 220 4.4E-33 T 10-11-2016 CJM129_RS04175 c5d73688d6ba026325145f12cdb3906d 220 SUPERFAMILY SSF52833 25 217 7.21E-26 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 Pfam PF12838 4Fe-4S dicluster domain 213 255 1.0E-6 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 Gene3D G3DSA:3.30.70.20 212 277 1.9E-12 T 10-11-2016 CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 Pfam PF13237 4Fe-4S dicluster domain 420 469 8.2E-6 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 SUPERFAMILY SSF54862 419 523 6.67E-29 T 10-11-2016 CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 SUPERFAMILY SSF54862 180 263 6.67E-29 T 10-11-2016 CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 Gene3D G3DSA:3.30.70.20 399 471 3.6E-12 T 10-11-2016 CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 PANTHER PTHR24960:SF43 420 553 1.1E-25 T 10-11-2016 CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 PANTHER PTHR24960:SF43 194 263 1.1E-25 T 10-11-2016 CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 PANTHER PTHR24960 194 263 1.1E-25 T 10-11-2016 CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 PANTHER PTHR24960 420 553 1.1E-25 T 10-11-2016 CJM129_RS07390 e7aa8c20770bd52c098fe59cf11821b0 557 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 242 253 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 157 33.671 T 10-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 PANTHER PTHR21342 1 154 4.4E-66 T 10-11-2016 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 SUPERFAMILY SSF52374 1 154 3.49E-44 T 10-11-2016 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 PANTHER PTHR21342:SF1 1 154 4.4E-66 T 10-11-2016 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 60 2.8E-18 T 10-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 Gene3D G3DSA:3.40.50.620 2 156 1.9E-50 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 Pfam PF01467 Cytidylyltransferase-like 4 132 2.8E-19 T 10-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 48 72 3.5E-45 T 10-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 84 100 3.5E-45 T 10-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 3.5E-45 T 10-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 3.5E-45 T 10-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 3.5E-45 T 10-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CJM129_RS03715 6a922d8fd310049a070a9596d0c135a8 158 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 2 155 9.8E-65 T 10-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 CJM129_RS07355 758e8b55b20c643f8a78c1deb63cec5f 439 PANTHER PTHR11119 3 425 1.5E-129 T 10-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CJM129_RS07355 758e8b55b20c643f8a78c1deb63cec5f 439 PANTHER PTHR11119:SF9 3 425 1.5E-129 T 10-11-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 CJM129_RS07355 758e8b55b20c643f8a78c1deb63cec5f 439 Pfam PF00860 Permease family 16 399 2.4E-44 T 10-11-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CJM129_RS04510 90bc13aed6d4bb8d50b371112989a116 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 38 57 3.2E-14 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04510 90bc13aed6d4bb8d50b371112989a116 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 249 269 3.2E-14 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04510 90bc13aed6d4bb8d50b371112989a116 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 297 316 3.2E-14 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04510 90bc13aed6d4bb8d50b371112989a116 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 9 30 3.2E-14 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04510 90bc13aed6d4bb8d50b371112989a116 444 Pfam PF00209 Sodium:neurotransmitter symporter family 144 442 2.6E-22 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04510 90bc13aed6d4bb8d50b371112989a116 444 Pfam PF00209 Sodium:neurotransmitter symporter family 6 122 7.5E-24 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04510 90bc13aed6d4bb8d50b371112989a116 444 SUPERFAMILY SSF161070 6 442 6.41E-109 T 10-11-2016 CJM129_RS04510 90bc13aed6d4bb8d50b371112989a116 444 PANTHER PTHR11616:SF167 6 443 7.4E-114 T 10-11-2016 CJM129_RS04510 90bc13aed6d4bb8d50b371112989a116 444 PANTHER PTHR11616 6 443 7.4E-114 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02340 418ea18da98b5ad04866674120d359c0 125 Gene3D G3DSA:3.30.1390.10 53 125 2.3E-32 T 10-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CJM129_RS02340 418ea18da98b5ad04866674120d359c0 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 2.1E-29 T 10-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CJM129_RS02340 418ea18da98b5ad04866674120d359c0 125 SUPERFAMILY SSF48300 4 61 7.19E-16 T 10-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02340 418ea18da98b5ad04866674120d359c0 125 Gene3D G3DSA:1.20.5.710 2 52 1.1E-21 T 10-11-2016 CJM129_RS02340 418ea18da98b5ad04866674120d359c0 125 SUPERFAMILY SSF54736 54 125 2.27E-24 T 10-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CJM129_RS02340 418ea18da98b5ad04866674120d359c0 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 4.3E-20 T 10-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02340 418ea18da98b5ad04866674120d359c0 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 125 25.296 T 10-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02340 418ea18da98b5ad04866674120d359c0 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 98 1.0E-14 T 10-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 CJM129_RS02340 418ea18da98b5ad04866674120d359c0 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 1.5E-48 T 10-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 SUPERFAMILY SSF52954 492 599 9.06E-27 T 10-11-2016 IPR004154 Anticodon-binding CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 PANTHER PTHR11451 1 600 8.3E-251 T 10-11-2016 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 Pfam PF03129 Anticodon binding domain 507 596 1.8E-22 T 10-11-2016 IPR004154 Anticodon-binding CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 289 493 1.3E-39 T 10-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 135 184 4.0E-14 T 10-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 Gene3D G3DSA:3.30.54.20 101 152 3.3E-14 T 10-11-2016 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 SUPERFAMILY SSF55681 208 490 5.55E-90 T 10-11-2016 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 41 596 5.8E-215 T 10-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 PANTHER PTHR11451:SF5 1 600 8.3E-251 T 10-11-2016 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 295 323 9.4E-50 T 10-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 429 457 9.4E-50 T 10-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 499 511 9.4E-50 T 10-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 485 9.4E-50 T 10-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 351 9.4E-50 T 10-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 SMART SM00863 135 184 3.6E-22 T 10-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 Gene3D G3DSA:3.40.50.800 497 600 2.8E-28 T 10-11-2016 IPR004154 Anticodon-binding CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 Gene3D G3DSA:3.30.930.10 207 494 2.0E-113 T 10-11-2016 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 35 599 32.77 T 10-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 SUPERFAMILY SSF55186 33 206 4.71E-57 T 10-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 Gene3D G3DSA:3.30.980.10 153 189 1.9E-37 T 10-11-2016 CJM129_RS01040 bc265ae3b126f348d465d3c85330782b 602 Gene3D G3DSA:3.30.980.10 35 98 1.9E-37 T 10-11-2016 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 Pfam PF00258 Flavodoxin 5 154 1.5E-26 T 10-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 TIGRFAM TIGR01752 flav_long: flavodoxin 3 162 5.9E-67 T 10-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 PANTHER PTHR19384 1 115 2.3E-32 T 10-11-2016 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 PANTHER PTHR19384 135 159 2.3E-32 T 10-11-2016 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 10-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 SUPERFAMILY SSF52218 1 160 4.0E-43 T 10-11-2016 IPR029039 Flavoprotein-like domain CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 PANTHER PTHR19384:SF73 1 115 2.3E-32 T 10-11-2016 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 PANTHER PTHR19384:SF73 135 159 2.3E-32 T 10-11-2016 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 PIRSF PIRSF038996 1 163 2.8E-56 T 10-11-2016 IPR010086 Flavodoxin, long chain GO:0010181 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 Gene3D G3DSA:3.40.50.360 1 162 1.1E-52 T 10-11-2016 IPR029039 Flavoprotein-like domain CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 PRINTS PR00369 Flavodoxin signature 75 85 6.3E-6 T 10-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 PRINTS PR00369 Flavodoxin signature 4 17 6.3E-6 T 10-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CJM129_RS07415 94f898275fabfb83cb84ac587d0d713c 163 PRINTS PR00369 Flavodoxin signature 48 59 6.3E-6 T 10-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CJM129_RS05930 2e522cac9afa23e9e757f5702eb795c7 295 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 283 8.0E-53 T 10-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CJM129_RS05930 2e522cac9afa23e9e757f5702eb795c7 295 PANTHER PTHR30606:SF2 7 283 2.6E-47 T 10-11-2016 CJM129_RS05930 2e522cac9afa23e9e757f5702eb795c7 295 PANTHER PTHR30606 7 283 2.6E-47 T 10-11-2016 CJM129_RS00830 289bb4d408ba4e716f29bdb2863807e2 294 PANTHER PTHR11048 1 293 1.6E-48 T 10-11-2016 CJM129_RS00830 289bb4d408ba4e716f29bdb2863807e2 294 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 7 293 1.6E-114 T 10-11-2016 IPR006371 4-hydroxybenzoate polyprenyltransferase-related CJM129_RS00830 289bb4d408ba4e716f29bdb2863807e2 294 PANTHER PTHR11048:SF7 1 293 1.6E-48 T 10-11-2016 CJM129_RS00830 289bb4d408ba4e716f29bdb2863807e2 294 Pfam PF01040 UbiA prenyltransferase family 25 277 1.4E-43 T 10-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 CJM129_RS05935 8fd7378c5002cb9adc0232e97d1c4bc0 515 Pfam PF00535 Glycosyl transferase family 2 260 398 2.5E-21 T 10-11-2016 IPR001173 Glycosyltransferase 2-like CJM129_RS05935 8fd7378c5002cb9adc0232e97d1c4bc0 515 Pfam PF00535 Glycosyl transferase family 2 7 100 7.0E-19 T 10-11-2016 IPR001173 Glycosyltransferase 2-like CJM129_RS05935 8fd7378c5002cb9adc0232e97d1c4bc0 515 Gene3D G3DSA:3.90.550.10 2 136 5.2E-21 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05935 8fd7378c5002cb9adc0232e97d1c4bc0 515 SUPERFAMILY SSF53448 255 494 3.88E-38 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05935 8fd7378c5002cb9adc0232e97d1c4bc0 515 PANTHER PTHR22916 423 491 3.0E-29 T 10-11-2016 CJM129_RS05935 8fd7378c5002cb9adc0232e97d1c4bc0 515 PANTHER PTHR22916 261 395 3.0E-29 T 10-11-2016 CJM129_RS05935 8fd7378c5002cb9adc0232e97d1c4bc0 515 SUPERFAMILY SSF53448 2 154 2.12E-24 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05935 8fd7378c5002cb9adc0232e97d1c4bc0 515 Pfam PF02709 N-terminal domain of galactosyltransferase 431 488 1.9E-15 T 10-11-2016 IPR027791 Galactosyltransferase, C-terminal UniPathway: UPA00378 CJM129_RS05935 8fd7378c5002cb9adc0232e97d1c4bc0 515 Gene3D G3DSA:3.90.550.10 252 512 6.4E-52 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS08405 43cced39aec3280d999676db888d369c 265 Gene3D G3DSA:3.60.15.10 67 259 7.7E-36 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS08405 43cced39aec3280d999676db888d369c 265 SMART SM00849 70 255 1.5E-19 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS08405 43cced39aec3280d999676db888d369c 265 Pfam PF00753 Metallo-beta-lactamase superfamily 71 255 4.5E-18 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS08405 43cced39aec3280d999676db888d369c 265 SUPERFAMILY SSF56281 70 260 6.68E-33 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS08405 43cced39aec3280d999676db888d369c 265 PANTHER PTHR23200 72 257 1.1E-23 T 10-11-2016 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 SUPERFAMILY SSF52540 4 170 1.11E-40 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 PANTHER PTHR11649 1 146 2.5E-221 T 10-11-2016 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 Gene3D G3DSA:3.40.50.300 2 166 2.3E-39 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 Pfam PF07664 Ferrous iron transport protein B C terminus 389 441 1.2E-15 T 10-11-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 Pfam PF07670 Nucleoside recognition 446 582 1.8E-33 T 10-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 Pfam PF07670 Nucleoside recognition 286 378 3.4E-14 T 10-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 156 4.1E-14 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 PANTHER PTHR11649:SF37 1 146 2.5E-221 T 10-11-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 PANTHER PTHR11649:SF37 200 611 2.5E-221 T 10-11-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 PANTHER PTHR11649 200 611 2.5E-221 T 10-11-2016 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 Pfam PF02421 Ferrous iron transport protein B 4 159 1.3E-58 T 10-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 CJM129_RS07475 392293ac23969a2b0ae0bd92bee1da1f 613 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 199 579 7.2E-127 T 10-11-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 Gene3D G3DSA:1.10.230.10 282 374 7.1E-38 T 10-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 10-11-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 PRINTS PR00143 Citrate synthase signature 380 394 3.0E-50 T 10-11-2016 IPR002020 Citrate synthase GO:0046912 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 PRINTS PR00143 Citrate synthase signature 297 317 3.0E-50 T 10-11-2016 IPR002020 Citrate synthase GO:0046912 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 PRINTS PR00143 Citrate synthase signature 166 179 3.0E-50 T 10-11-2016 IPR002020 Citrate synthase GO:0046912 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 PRINTS PR00143 Citrate synthase signature 242 270 3.0E-50 T 10-11-2016 IPR002020 Citrate synthase GO:0046912 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 PRINTS PR00143 Citrate synthase signature 360 376 3.0E-50 T 10-11-2016 IPR002020 Citrate synthase GO:0046912 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 PRINTS PR00143 Citrate synthase signature 220 235 3.0E-50 T 10-11-2016 IPR002020 Citrate synthase GO:0046912 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 PIRSF PIRSF001369 38 422 1.8E-147 T 10-11-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 PANTHER PTHR11739 5 419 7.2E-167 T 10-11-2016 IPR002020 Citrate synthase GO:0046912 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 420 1.5E-172 T 10-11-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 Gene3D G3DSA:1.10.580.10 53 281 8.8E-90 T 10-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 SUPERFAMILY SSF48256 6 420 9.29E-153 T 10-11-2016 IPR002020 Citrate synthase GO:0046912 CJM129_RS08975 eccb6734dd6521f131fbf471001d1c01 422 Pfam PF00285 Citrate synthase, C-terminal domain 47 412 3.8E-128 T 10-11-2016 IPR002020 Citrate synthase GO:0046912 CJM129_RS01080 0a21b259142621ab28272e1f3035155c 43 Gene3D G3DSA:2.40.128.130 3 43 2.9E-8 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS01080 0a21b259142621ab28272e1f3035155c 43 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 3 43 1.9E-6 T 10-11-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 CJM129_RS01080 0a21b259142621ab28272e1f3035155c 43 SUPERFAMILY SSF103515 2 43 2.22E-5 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS04110 74a5eff4cdb9a312dbbc5deecba71743 395 PANTHER PTHR23521:SF2 4 373 3.2E-68 T 10-11-2016 CJM129_RS04110 74a5eff4cdb9a312dbbc5deecba71743 395 Gene3D G3DSA:1.20.1250.20 8 177 1.1E-15 T 10-11-2016 CJM129_RS04110 74a5eff4cdb9a312dbbc5deecba71743 395 Gene3D G3DSA:1.20.1250.20 204 373 9.0E-18 T 10-11-2016 CJM129_RS04110 74a5eff4cdb9a312dbbc5deecba71743 395 ProSitePatterns PS00216 Sugar transport proteins signature 1. 254 271 - T 10-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJM129_RS04110 74a5eff4cdb9a312dbbc5deecba71743 395 PANTHER PTHR23521 4 373 3.2E-68 T 10-11-2016 CJM129_RS04110 74a5eff4cdb9a312dbbc5deecba71743 395 SUPERFAMILY SSF103473 8 374 2.35E-40 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS04110 74a5eff4cdb9a312dbbc5deecba71743 395 Pfam PF07690 Major Facilitator Superfamily 14 317 4.4E-20 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS01645 780210f286ba63529959e650367021c4 416 Gene3D G3DSA:3.60.120.10 64 410 2.4E-101 T 10-11-2016 IPR005801 ADC synthase GO:0009058 CJM129_RS01645 780210f286ba63529959e650367021c4 416 SUPERFAMILY SSF56322 12 409 1.83E-100 T 10-11-2016 IPR005801 ADC synthase GO:0009058 CJM129_RS01645 780210f286ba63529959e650367021c4 416 PANTHER PTHR11236 149 413 6.5E-101 T 10-11-2016 CJM129_RS01645 780210f286ba63529959e650367021c4 416 Pfam PF00425 chorismate binding enzyme 150 400 1.8E-77 T 10-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal CJM129_RS01645 780210f286ba63529959e650367021c4 416 PRINTS PR00095 Anthranilate synthase component I signature 342 356 3.5E-14 T 10-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CJM129_RS01645 780210f286ba63529959e650367021c4 416 PRINTS PR00095 Anthranilate synthase component I signature 357 371 3.5E-14 T 10-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CJM129_RS01645 780210f286ba63529959e650367021c4 416 PRINTS PR00095 Anthranilate synthase component I signature 264 277 3.5E-14 T 10-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CJM129_RS01645 780210f286ba63529959e650367021c4 416 PRINTS PR00095 Anthranilate synthase component I signature 250 263 3.5E-14 T 10-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 CJM129_RS01645 780210f286ba63529959e650367021c4 416 PANTHER PTHR11236:SF9 149 413 6.5E-101 T 10-11-2016 CJM129_RS01530 78d7126f093edbfff491aa9c40ddfe65 136 PANTHER PTHR33202 2 136 4.0E-30 T 10-11-2016 CJM129_RS01530 78d7126f093edbfff491aa9c40ddfe65 136 SUPERFAMILY SSF46785 2 128 6.0E-32 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS01530 78d7126f093edbfff491aa9c40ddfe65 136 Gene3D G3DSA:1.10.10.10 2 79 1.3E-25 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS01530 78d7126f093edbfff491aa9c40ddfe65 136 PANTHER PTHR33202:SF7 2 136 4.0E-30 T 10-11-2016 CJM129_RS01530 78d7126f093edbfff491aa9c40ddfe65 136 Pfam PF01475 Ferric uptake regulator family 10 123 1.3E-27 T 10-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CJM129_RS03490 a4036f70624b03afed13f540df17eb38 271 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 173 179 - T 10-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJM129_RS03490 a4036f70624b03afed13f540df17eb38 271 SUPERFAMILY SSF53335 16 248 1.1E-42 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03490 a4036f70624b03afed13f540df17eb38 271 Gene3D G3DSA:3.40.50.150 74 263 2.0E-38 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03490 a4036f70624b03afed13f540df17eb38 271 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 258 2.0E-48 T 10-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CJM129_RS03490 a4036f70624b03afed13f540df17eb38 271 Pfam PF05175 Methyltransferase small domain 100 181 1.9E-11 T 10-11-2016 IPR007848 Methyltransferase small domain GO:0008168 CJM129_RS03490 a4036f70624b03afed13f540df17eb38 271 PANTHER PTHR18895 18 267 4.2E-52 T 10-11-2016 CJM129_RS03490 a4036f70624b03afed13f540df17eb38 271 PANTHER PTHR18895:SF64 18 267 4.2E-52 T 10-11-2016 CJM129_RS03490 a4036f70624b03afed13f540df17eb38 271 Gene3D G3DSA:1.10.8.10 2 73 1.8E-10 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 ProSitePatterns PS00755 Protein secY signature 1. 62 81 - T 10-11-2016 IPR030659 SecY conserved site CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PANTHER PTHR10906:SF2 5 414 2.1E-149 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PANTHER PTHR10906 5 414 2.1E-149 T 10-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 Gene3D G3DSA:1.10.3370.10 3 416 5.6E-138 T 10-11-2016 IPR023201 SecY subunit domain CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 Pfam PF00344 SecY translocase 62 401 1.5E-101 T 10-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 417 26.945 T 10-11-2016 IPR026593 Protein translocase subunit SecY CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PIRSF PIRSF004557 1 420 3.3E-120 T 10-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 412 3.8E-111 T 10-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 8.6E-87 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PRINTS PR00303 Preprotein translocase SecY subunit signature 260 279 8.6E-87 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PRINTS PR00303 Preprotein translocase SecY subunit signature 354 372 8.6E-87 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PRINTS PR00303 Preprotein translocase SecY subunit signature 299 321 8.6E-87 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PRINTS PR00303 Preprotein translocase SecY subunit signature 386 404 8.6E-87 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PRINTS PR00303 Preprotein translocase SecY subunit signature 142 167 8.6E-87 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PRINTS PR00303 Preprotein translocase SecY subunit signature 9 27 8.6E-87 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PRINTS PR00303 Preprotein translocase SecY subunit signature 61 81 8.6E-87 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 PRINTS PR00303 Preprotein translocase SecY subunit signature 168 191 8.6E-87 T 10-11-2016 CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 ProSitePatterns PS00756 Protein secY signature 2. 161 178 - T 10-11-2016 IPR030659 SecY conserved site CJM129_RS09000 568f58e90d8070c7211177d1b2951267 421 SUPERFAMILY SSF103491 4 408 3.92E-112 T 10-11-2016 IPR023201 SecY subunit domain CJM129_RS04390 e9d9d090befdec6f6b58f4d93bcf217c 186 Gene3D G3DSA:3.40.30.10 9 184 9.6E-39 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS04390 e9d9d090befdec6f6b58f4d93bcf217c 186 SUPERFAMILY SSF52833 29 184 1.26E-32 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS04390 e9d9d090befdec6f6b58f4d93bcf217c 186 PANTHER PTHR12151:SF0 30 183 1.6E-28 T 10-11-2016 CJM129_RS04390 e9d9d090befdec6f6b58f4d93bcf217c 186 PANTHER PTHR12151 30 183 1.6E-28 T 10-11-2016 IPR003782 Copper chaperone SCO1/SenC CJM129_RS04390 e9d9d090befdec6f6b58f4d93bcf217c 186 Pfam PF02630 SCO1/SenC 34 166 4.5E-23 T 10-11-2016 IPR003782 Copper chaperone SCO1/SenC CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 10-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 PANTHER PTHR10055:SF10 2 319 3.8E-121 T 10-11-2016 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 319 35.677 T 10-11-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 PANTHER PTHR10055 2 319 3.8E-121 T 10-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 319 1.3E-86 T 10-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 SUPERFAMILY SSF52374 2 319 1.72E-82 T 10-11-2016 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 Gene3D G3DSA:1.10.240.10 198 286 8.4E-29 T 10-11-2016 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 Gene3D G3DSA:3.40.50.620 1 197 3.1E-77 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 138 159 1.8E-22 T 10-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 1.8E-22 T 10-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 63 82 1.8E-22 T 10-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 189 199 1.8E-22 T 10-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 CJM129_RS01855 ea9f9f2768d2a1695f368f5560336ef3 319 Pfam PF00579 tRNA synthetases class I (W and Y) 1 274 2.2E-61 T 10-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03865 88684b34f25de19b3d4a88b74fe36f3d 71 Gene3D G3DSA:3.40.1620.10 30 57 3.8E-5 T 10-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CJM129_RS03865 88684b34f25de19b3d4a88b74fe36f3d 71 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 8 65 1.3E-8 T 10-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CJM129_RS03865 88684b34f25de19b3d4a88b74fe36f3d 71 SUPERFAMILY SSF143120 8 65 4.45E-10 T 10-11-2016 CJM129_RS00900 e7f30b4143a4a9ac111addf93b2a379e 755 SUPERFAMILY SSF56935 56 755 1.36E-56 T 10-11-2016 CJM129_RS00900 e7f30b4143a4a9ac111addf93b2a379e 755 Gene3D G3DSA:2.170.130.10 58 171 1.0E-25 T 10-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJM129_RS00900 e7f30b4143a4a9ac111addf93b2a379e 755 Pfam PF00593 TonB dependent receptor 471 754 6.3E-24 T 10-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJM129_RS00900 e7f30b4143a4a9ac111addf93b2a379e 755 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 156 2.2E-6 T 10-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJM129_RS00900 e7f30b4143a4a9ac111addf93b2a379e 755 Gene3D G3DSA:2.40.170.20 201 228 2.2E-41 T 10-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJM129_RS00900 e7f30b4143a4a9ac111addf93b2a379e 755 Gene3D G3DSA:2.40.170.20 285 755 2.2E-41 T 10-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJM129_RS04615 b45ec52fce5be8bdbc69ff2e800b5d6a 177 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 7 150 1.1E-19 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS04615 b45ec52fce5be8bdbc69ff2e800b5d6a 177 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 87 1.7E-7 T 10-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJM129_RS04615 b45ec52fce5be8bdbc69ff2e800b5d6a 177 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 89 118 1.7E-7 T 10-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJM129_RS04615 b45ec52fce5be8bdbc69ff2e800b5d6a 177 PANTHER PTHR32089 28 136 5.5E-12 T 10-11-2016 CJM129_RS04615 b45ec52fce5be8bdbc69ff2e800b5d6a 177 SUPERFAMILY SSF58104 4 167 1.83E-25 T 10-11-2016 CJM129_RS04615 b45ec52fce5be8bdbc69ff2e800b5d6a 177 Gene3D G3DSA:1.10.287.950 14 173 8.4E-24 T 10-11-2016 CJM129_RS04615 b45ec52fce5be8bdbc69ff2e800b5d6a 177 PANTHER PTHR32089:SF46 28 136 5.5E-12 T 10-11-2016 CJM129_RS07530 3186ed0b28946c89a9137b2042a8ed20 115 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 114 6.6E-33 T 10-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJM129_RS07530 3186ed0b28946c89a9137b2042a8ed20 115 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 6 112 9.0E-57 T 10-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJM129_RS07530 3186ed0b28946c89a9137b2042a8ed20 115 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 114 1.5E-25 T 10-11-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJM129_RS07530 3186ed0b28946c89a9137b2042a8ed20 115 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 2 112 2.4E-20 T 10-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJM129_RS07530 3186ed0b28946c89a9137b2042a8ed20 115 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 114 18.27 T 10-11-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJM129_RS07530 3186ed0b28946c89a9137b2042a8ed20 115 Gene3D G3DSA:3.90.470.20 2 113 1.6E-28 T 10-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJM129_RS07530 3186ed0b28946c89a9137b2042a8ed20 115 SUPERFAMILY SSF56214 2 113 4.71E-26 T 10-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 PRINTS PR01874 DNA repair protein radA signature 246 272 1.3E-86 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 PRINTS PR01874 DNA repair protein radA signature 211 239 1.3E-86 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 PRINTS PR01874 DNA repair protein radA signature 317 340 1.3E-86 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 PRINTS PR01874 DNA repair protein radA signature 122 139 1.3E-86 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 PRINTS PR01874 DNA repair protein radA signature 80 108 1.3E-86 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 PRINTS PR01874 DNA repair protein radA signature 172 196 1.3E-86 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 PRINTS PR01874 DNA repair protein radA signature 10 34 1.3E-86 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 PANTHER PTHR32472:SF10 1 422 3.8E-173 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 Gene3D G3DSA:3.30.230.10 289 445 1.1E-28 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 PANTHER PTHR32472 1 422 3.8E-173 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 SUPERFAMILY SSF52540 65 285 6.27E-49 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 SMART SM00382 88 243 4.8E-13 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 423 1.1E-9 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 Gene3D G3DSA:3.40.50.300 61 273 2.2E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 Pfam PF13481 AAA domain 69 220 1.1E-15 T 10-11-2016 CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 SUPERFAMILY SSF54211 300 445 5.69E-31 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 SUPERFAMILY SSF54211 253 267 5.69E-31 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS06275 9111c28c58295a5b102d078cdfbc674c 446 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 442 3.9E-177 T 10-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 235 315 3.4E-29 T 10-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 38 322 4.3E-106 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 73 214 2.4E-28 T 10-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 Gene3D G3DSA:3.40.50.700 62 233 2.0E-47 T 10-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PANTHER PTHR30013 62 313 1.8E-114 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 Gene3D G3DSA:4.10.480.10 235 319 4.9E-34 T 10-11-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PANTHER PTHR30013:SF7 62 313 1.8E-114 T 10-11-2016 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 222 239 2.7E-65 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 58 80 2.7E-65 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 168 192 2.7E-65 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 264 290 2.7E-65 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 292 305 2.7E-65 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 81 105 2.7E-65 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 124 147 2.7E-65 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 240 258 2.7E-65 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 196 219 2.7E-65 T 10-11-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CJM129_RS07480 a4ab1f0bb8a262dfbe8e0d8c6cb28327 497 SUPERFAMILY SSF56770 62 318 6.73E-82 T 10-11-2016 CJM129_RS01505 8b8bfb5e29f36c75b5736fea25d0d6af 364 SUPERFAMILY SSF53383 4 357 2.88E-66 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS01505 8b8bfb5e29f36c75b5736fea25d0d6af 364 Gene3D G3DSA:3.90.1150.10 266 363 1.9E-17 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS01505 8b8bfb5e29f36c75b5736fea25d0d6af 364 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 363 51.641 T 10-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CJM129_RS01505 8b8bfb5e29f36c75b5736fea25d0d6af 364 PANTHER PTHR11751 6 364 2.3E-81 T 10-11-2016 CJM129_RS01505 8b8bfb5e29f36c75b5736fea25d0d6af 364 Pfam PF00155 Aminotransferase class I and II 30 353 3.0E-48 T 10-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJM129_RS01505 8b8bfb5e29f36c75b5736fea25d0d6af 364 PANTHER PTHR11751:SF414 6 364 2.3E-81 T 10-11-2016 CJM129_RS01505 8b8bfb5e29f36c75b5736fea25d0d6af 364 Gene3D G3DSA:3.40.640.10 43 265 6.1E-55 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS01505 8b8bfb5e29f36c75b5736fea25d0d6af 364 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 362 1.3E-118 T 10-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 CJM129_RS07025 424015b1455996e82fe426e2974779a5 410 SUPERFAMILY SSF53474 25 83 5.25E-12 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07025 424015b1455996e82fe426e2974779a5 410 SUPERFAMILY SSF53474 261 338 5.25E-12 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07025 424015b1455996e82fe426e2974779a5 410 SUPERFAMILY SSF53474 156 229 5.25E-12 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07025 424015b1455996e82fe426e2974779a5 410 Pfam PF11144 Protein of unknown function (DUF2920) 5 407 1.3E-189 T 10-11-2016 IPR022605 Protein of unknown function DUF2920 CJM129_RS07025 424015b1455996e82fe426e2974779a5 410 Gene3D G3DSA:3.40.50.1820 14 87 1.1E-7 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07025 424015b1455996e82fe426e2974779a5 410 Gene3D G3DSA:3.40.50.1820 160 226 1.1E-7 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07025 424015b1455996e82fe426e2974779a5 410 Gene3D G3DSA:3.40.50.1820 293 338 1.1E-7 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 SUPERFAMILY SSF51735 223 343 8.4E-55 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 SUPERFAMILY SSF51735 1 189 8.4E-55 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 Gene3D G3DSA:3.90.25.10 233 247 2.8E-11 T 10-11-2016 CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 Gene3D G3DSA:3.90.25.10 326 343 2.8E-11 T 10-11-2016 CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 Gene3D G3DSA:3.40.50.720 248 284 8.1E-37 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 Gene3D G3DSA:3.40.50.720 2 168 8.1E-37 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 PANTHER PTHR10366 6 189 1.2E-79 T 10-11-2016 CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 Gene3D G3DSA:3.90.25.10 285 325 1.8E-29 T 10-11-2016 CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 Gene3D G3DSA:3.90.25.10 170 232 1.8E-29 T 10-11-2016 CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 PANTHER PTHR10366 224 346 1.2E-79 T 10-11-2016 CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 272 2.0E-50 T 10-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 340 39.745 T 10-11-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 PANTHER PTHR10366:SF246 6 189 1.2E-79 T 10-11-2016 CJM129_RS07630 ff9e1111b94c9cd961ba1104724f89fe 346 PANTHER PTHR10366:SF246 224 346 1.2E-79 T 10-11-2016 CJM129_RS08380 5550333eb7ce1805dd4632e8cd6e832b 511 Gene3D G3DSA:3.10.105.10 271 476 1.5E-49 T 10-11-2016 CJM129_RS08380 5550333eb7ce1805dd4632e8cd6e832b 511 SUPERFAMILY SSF53850 20 499 3.1E-122 T 10-11-2016 CJM129_RS08380 5550333eb7ce1805dd4632e8cd6e832b 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 63 417 3.0E-81 T 10-11-2016 IPR000914 Solute-binding protein family 5 domain CJM129_RS08380 5550333eb7ce1805dd4632e8cd6e832b 511 Gene3D G3DSA:3.40.190.10 122 270 6.0E-41 T 10-11-2016 CJM129_RS08380 5550333eb7ce1805dd4632e8cd6e832b 511 PIRSF PIRSF002741 15 510 3.5E-114 T 10-11-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CJM129_RS08380 5550333eb7ce1805dd4632e8cd6e832b 511 PANTHER PTHR30290 3 509 5.6E-120 T 10-11-2016 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 Gene3D G3DSA:3.40.50.1370 134 287 1.8E-55 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 7.6E-24 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 42 61 7.6E-24 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 7.6E-24 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 124 135 7.6E-24 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 Gene3D G3DSA:3.40.50.1370 1 133 4.0E-53 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 137 1.7E-49 T 10-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 73 86 4.1E-26 T 10-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 40 54 4.1E-26 T 10-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 217 227 4.1E-26 T 10-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 4.1E-26 T 10-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PRINTS PR00102 Ornithine carbamoyltransferase signature 113 127 4.1E-26 T 10-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 301 73.018 T 10-11-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 298 5.9E-53 T 10-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 42 49 - T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PANTHER PTHR11405 1 299 1.1E-123 T 10-11-2016 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 PANTHER PTHR11405:SF1 1 299 1.1E-123 T 10-11-2016 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 SUPERFAMILY SSF53671 1 301 5.24E-95 T 10-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJM129_RS04830 cdb580367b2359db6202013040f01efa 306 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 298 2.0E-111 T 10-11-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CJM129_RS04040 3dcc956e0b94056394e61142eee90f04 150 PANTHER PTHR10815 34 150 5.2E-47 T 10-11-2016 CJM129_RS04040 3dcc956e0b94056394e61142eee90f04 150 SUPERFAMILY SSF46767 66 148 1.12E-29 T 10-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CJM129_RS04040 3dcc956e0b94056394e61142eee90f04 150 Gene3D G3DSA:1.10.10.10 65 149 3.4E-34 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS04040 3dcc956e0b94056394e61142eee90f04 150 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 69 147 1.1E-30 T 10-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CJM129_RS04040 3dcc956e0b94056394e61142eee90f04 150 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 67 145 3.9E-34 T 10-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 CJM129_RS04040 3dcc956e0b94056394e61142eee90f04 150 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 117 123 - T 10-11-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 CJM129_RS04040 3dcc956e0b94056394e61142eee90f04 150 SUPERFAMILY SSF53155 1 70 1.92E-7 T 10-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 CJM129_RS04040 3dcc956e0b94056394e61142eee90f04 150 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 148 37.076 T 10-11-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CJM129_RS04040 3dcc956e0b94056394e61142eee90f04 150 PANTHER PTHR10815:SF5 34 150 5.2E-47 T 10-11-2016 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 1.3E-91 T 10-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 10-11-2016 IPR018280 Ribosomal protein S3, conserved site CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.884 T 10-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 SUPERFAMILY SSF54821 109 206 1.83E-38 T 10-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 PANTHER PTHR11760 2 223 8.7E-117 T 10-11-2016 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.2E-39 T 10-11-2016 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 PANTHER PTHR11760:SF19 2 223 8.7E-117 T 10-11-2016 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 Pfam PF07650 KH domain 38 107 1.2E-17 T 10-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 SUPERFAMILY SSF54814 2 105 2.62E-35 T 10-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 Gene3D G3DSA:3.30.1140.32 110 207 2.6E-44 T 10-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 Gene3D G3DSA:3.30.300.20 17 105 1.5E-29 T 10-11-2016 IPR015946 K homology domain-like, alpha/beta CJM129_RS09065 b372fd22d0e5a017b27745debae5abfe 233 SMART SM00322 60 125 2.2E-4 T 10-11-2016 IPR004087 K Homology domain GO:0003676 CJM129_RS04130 83b8e3490505a1a0f6d1645e3f73edf4 115 Gene3D G3DSA:1.10.760.10 29 113 8.6E-7 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS04130 83b8e3490505a1a0f6d1645e3f73edf4 115 SUPERFAMILY SSF46626 27 110 1.17E-9 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 Hamap MF_01491 Ribonuclease J [rnj]. 109 662 42.518 T 10-11-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 471 499 - T 10-11-2016 IPR001587 Ribonuclease J, conserved site CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 PANTHER PTHR11203:SF22 106 659 6.0E-189 T 10-11-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 SMART SM00849 126 322 2.6E-23 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 462 515 1.6E-9 T 10-11-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 114 659 3.1E-194 T 10-11-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 Pfam PF00753 Metallo-beta-lactamase superfamily 123 281 3.2E-15 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 SUPERFAMILY SSF56281 114 531 1.24E-90 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 Gene3D G3DSA:3.60.15.10 111 362 3.5E-76 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS09110 bf8cc68afd09b2831b6a98aefc6632af 662 PANTHER PTHR11203 106 659 6.0E-189 T 10-11-2016 CJM129_RS04150 d86ff8fdb1d32ee65b3d83d830a56afc 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 405 6.2E-93 T 10-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CJM129_RS04150 d86ff8fdb1d32ee65b3d83d830a56afc 418 Gene3D G3DSA:3.65.10.10 227 415 2.0E-52 T 10-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CJM129_RS04150 d86ff8fdb1d32ee65b3d83d830a56afc 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 43.332 T 10-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS04150 d86ff8fdb1d32ee65b3d83d830a56afc 418 SUPERFAMILY SSF55205 1 417 6.38E-127 T 10-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CJM129_RS04150 d86ff8fdb1d32ee65b3d83d830a56afc 418 Gene3D G3DSA:3.65.10.10 21 217 2.2E-56 T 10-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CJM129_RS04150 d86ff8fdb1d32ee65b3d83d830a56afc 418 PANTHER PTHR21090 1 418 6.8E-161 T 10-11-2016 CJM129_RS04150 d86ff8fdb1d32ee65b3d83d830a56afc 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 2.0E-179 T 10-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS08650 c9b13a4533b0d3ea115e0cea451b9901 362 Hamap MF_00300 Chorismate synthase [aroC]. 8 352 33.711 T 10-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS08650 c9b13a4533b0d3ea115e0cea451b9901 362 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 10-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS08650 c9b13a4533b0d3ea115e0cea451b9901 362 Pfam PF01264 Chorismate synthase 8 345 1.8E-123 T 10-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS08650 c9b13a4533b0d3ea115e0cea451b9901 362 PIRSF PIRSF001456 1 360 1.5E-124 T 10-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS08650 c9b13a4533b0d3ea115e0cea451b9901 362 Gene3D G3DSA:3.60.150.10 8 357 1.9E-133 T 10-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS08650 c9b13a4533b0d3ea115e0cea451b9901 362 TIGRFAM TIGR00033 aroC: chorismate synthase 8 348 8.4E-114 T 10-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS08650 c9b13a4533b0d3ea115e0cea451b9901 362 ProSitePatterns PS00788 Chorismate synthase signature 2. 121 137 - T 10-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS08650 c9b13a4533b0d3ea115e0cea451b9901 362 PANTHER PTHR21085 1 346 1.2E-150 T 10-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS08650 c9b13a4533b0d3ea115e0cea451b9901 362 SUPERFAMILY SSF103263 2 351 6.41E-129 T 10-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 241 32.005 T 10-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 126 143 - T 10-11-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 102 3.2E-22 T 10-11-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 Gene3D G3DSA:3.40.50.720 2 109 2.2E-8 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 Gene3D G3DSA:3.30.360.10 110 210 1.5E-36 T 10-11-2016 CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 PANTHER PTHR20836 1 241 1.4E-60 T 10-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 SUPERFAMILY SSF51735 1 103 2.79E-35 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 SUPERFAMILY SSF51735 212 242 2.79E-35 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 105 240 3.0E-39 T 10-11-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 PIRSF PIRSF000161 1 242 3.0E-78 T 10-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 44 241 6.4E-69 T 10-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS00995 9a8ad0fef7490b0252d2e56e6f84b778 242 SUPERFAMILY SSF55347 104 212 1.16E-33 T 10-11-2016 CJM129_RS04475 d79cfacecf99120e8b5920348202e06f 198 PANTHER PTHR30353:SF8 1 181 1.6E-31 T 10-11-2016 CJM129_RS04475 d79cfacecf99120e8b5920348202e06f 198 PANTHER PTHR30353 1 181 1.6E-31 T 10-11-2016 IPR032818 DedA family CJM129_RS04475 d79cfacecf99120e8b5920348202e06f 198 Pfam PF09335 SNARE associated Golgi protein 28 146 5.2E-15 T 10-11-2016 IPR032816 SNARE associated Golgi protein CJM129_RS01710 1a038f86bf6c12b7c9061c18bdb284da 341 PANTHER PTHR30600 50 327 4.4E-91 T 10-11-2016 CJM129_RS01710 1a038f86bf6c12b7c9061c18bdb284da 341 SUPERFAMILY SSF46626 194 338 2.6E-35 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS01710 1a038f86bf6c12b7c9061c18bdb284da 341 PANTHER PTHR30600:SF7 50 327 4.4E-91 T 10-11-2016 CJM129_RS01710 1a038f86bf6c12b7c9061c18bdb284da 341 Pfam PF03150 Di-haem cytochrome c peroxidase 58 206 7.0E-45 T 10-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CJM129_RS01710 1a038f86bf6c12b7c9061c18bdb284da 341 Pfam PF00034 Cytochrome c 214 317 3.2E-8 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS01710 1a038f86bf6c12b7c9061c18bdb284da 341 SUPERFAMILY SSF46626 52 195 5.18E-46 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS01710 1a038f86bf6c12b7c9061c18bdb284da 341 Gene3D G3DSA:1.10.760.10 54 198 9.4E-45 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS01710 1a038f86bf6c12b7c9061c18bdb284da 341 PIRSF PIRSF000294 2 341 1.3E-126 T 10-11-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CJM129_RS01710 1a038f86bf6c12b7c9061c18bdb284da 341 Gene3D G3DSA:1.10.760.10 199 323 6.9E-37 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 Gene3D G3DSA:3.30.70.20 173 205 4.6E-7 T 10-11-2016 CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 SUPERFAMILY SSF54862 71 93 5.9E-22 T 10-11-2016 CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 SUPERFAMILY SSF54862 127 251 5.9E-22 T 10-11-2016 CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 Gene3D G3DSA:3.30.70.20 206 252 2.3E-10 T 10-11-2016 CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 3 252 9.5E-105 T 10-11-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 Pfam PF12801 4Fe-4S binding domain 59 103 5.4E-13 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 PANTHER PTHR30176 1 251 1.1E-34 T 10-11-2016 CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 Pfam PF13237 4Fe-4S dicluster domain 195 244 4.9E-8 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 203 214 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS03790 135d33a9a217b9df450e150b2995a40e 259 PANTHER PTHR30176:SF2 1 251 1.1E-34 T 10-11-2016 CJM129_RS08800 e84959d6c18ae32c07f539781b7cfb03 162 Gene3D G3DSA:3.40.30.10 46 161 5.0E-23 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS08800 e84959d6c18ae32c07f539781b7cfb03 162 Pfam PF08534 Redoxin 28 160 4.4E-11 T 10-11-2016 IPR013740 Redoxin GO:0016491 CJM129_RS08800 e84959d6c18ae32c07f539781b7cfb03 162 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 10-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 CJM129_RS08800 e84959d6c18ae32c07f539781b7cfb03 162 SUPERFAMILY SSF52833 5 162 1.48E-20 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS08775 adca07e53f2dceae39865bb99efc6956 179 PIRSF PIRSF017018 1 179 9.0E-68 T 10-11-2016 IPR018470 Periplasmic metal-binding protein Tp34-type CJM129_RS08775 adca07e53f2dceae39865bb99efc6956 179 Pfam PF10634 Fe2+ transport protein 21 176 1.0E-66 T 10-11-2016 IPR018470 Periplasmic metal-binding protein Tp34-type CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 SUPERFAMILY SSF54292 2 105 1.57E-24 T 10-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 Pfam PF13183 4Fe-4S dicluster domain 147 221 4.1E-8 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 Gene3D G3DSA:3.10.20.30 3 105 3.4E-31 T 10-11-2016 IPR012675 Beta-grasp domain CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 57 65 - T 10-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 6 111 2.2E-29 T 10-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 SUPERFAMILY SSF46548 109 237 2.27E-24 T 10-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 PANTHER PTHR11921 3 241 5.4E-75 T 10-11-2016 CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 PANTHER PTHR11921:SF13 3 241 5.4E-75 T 10-11-2016 CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 18 230 5.1E-48 T 10-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CJM129_RS01965 6db4e562e4f9c43930c4b1c333b905f1 241 Gene3D G3DSA:1.10.1060.10 110 238 3.7E-27 T 10-11-2016 CJM129_RS02055 16382c096871a6c7e48a451973185ab2 194 Gene3D G3DSA:3.30.230.30 2 125 5.5E-37 T 10-11-2016 IPR001498 Impact, N-terminal CJM129_RS02055 16382c096871a6c7e48a451973185ab2 194 SUPERFAMILY SSF54211 2 124 1.52E-36 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS02055 16382c096871a6c7e48a451973185ab2 194 PANTHER PTHR16301 2 180 6.9E-34 T 10-11-2016 IPR023582 Impact family CJM129_RS02055 16382c096871a6c7e48a451973185ab2 194 PANTHER PTHR16301:SF0 2 180 6.9E-34 T 10-11-2016 CJM129_RS02055 16382c096871a6c7e48a451973185ab2 194 Pfam PF01205 Uncharacterized protein family UPF0029 15 118 2.1E-23 T 10-11-2016 IPR001498 Impact, N-terminal CJM129_RS02450 7de291596f39c70e3821eca60f962186 96 Pfam PF02583 Metal-sensitive transcriptional repressor 16 92 7.6E-24 T 10-11-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CJM129_RS02450 7de291596f39c70e3821eca60f962186 96 PANTHER PTHR33677 3 96 7.6E-27 T 10-11-2016 CJM129_RS02450 7de291596f39c70e3821eca60f962186 96 PANTHER PTHR33677:SF3 3 96 7.6E-27 T 10-11-2016 CJM129_RS09160 857ce0c5256aab9466c1cc1e18ab9a41 200 PANTHER PTHR11670 1 200 2.2E-84 T 10-11-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09160 857ce0c5256aab9466c1cc1e18ab9a41 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 9.7E-69 T 10-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09160 857ce0c5256aab9466c1cc1e18ab9a41 200 SUPERFAMILY SSF52016 1 196 2.55E-55 T 10-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJM129_RS09160 857ce0c5256aab9466c1cc1e18ab9a41 200 Gene3D G3DSA:3.20.19.10 1 195 1.4E-43 T 10-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJM129_RS09160 857ce0c5256aab9466c1cc1e18ab9a41 200 Pfam PF00694 Aconitase C-terminal domain 1 125 3.2E-36 T 10-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS09160 857ce0c5256aab9466c1cc1e18ab9a41 200 PANTHER PTHR11670:SF27 1 200 2.2E-84 T 10-11-2016 CJM129_RS09160 857ce0c5256aab9466c1cc1e18ab9a41 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 40.681 T 10-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 CJM129_RS08255 cbbfa45b8ea7df9ddb098bd200fb1224 313 Pfam PF03773 Predicted permease 13 311 7.8E-53 T 10-11-2016 IPR005524 Predicted permease DUF318 CJM129_RS08255 cbbfa45b8ea7df9ddb098bd200fb1224 313 PANTHER PTHR34184 9 313 2.9E-49 T 10-11-2016 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 SUPERFAMILY SSF55931 3 295 9.16E-121 T 10-11-2016 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 471 2.5E-180 T 10-11-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 SMART SM00845 324 471 5.5E-64 T 10-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 Pfam PF02934 GatB/GatE catalytic domain 4 287 9.7E-114 T 10-11-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 140 154 - T 10-11-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 PANTHER PTHR11659 2 471 1.6E-225 T 10-11-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 1 472 37.615 T 10-11-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 PANTHER PTHR11659:SF0 2 471 1.6E-225 T 10-11-2016 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 SUPERFAMILY SSF89095 293 394 1.11E-26 T 10-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CJM129_RS06235 f270dcb8a1d9b64432259e53ea4d8bd5 472 Pfam PF02637 GatB domain 324 471 2.6E-44 T 10-11-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 SUPERFAMILY SSF51604 138 405 1.63E-113 T 10-11-2016 IPR029065 Enolase C-terminal domain-like CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 Gene3D G3DSA:3.30.390.10 4 125 2.2E-50 T 10-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 Gene3D G3DSA:3.20.20.120 127 405 2.0E-123 T 10-11-2016 IPR029065 Enolase C-terminal domain-like CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 PRINTS PR00148 Enolase signature 160 173 9.7E-41 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 PRINTS PR00148 Enolase signature 37 51 9.7E-41 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 PRINTS PR00148 Enolase signature 358 375 9.7E-41 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 PRINTS PR00148 Enolase signature 106 122 9.7E-41 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 PRINTS PR00148 Enolase signature 306 317 9.7E-41 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 PRINTS PR00148 Enolase signature 329 343 9.7E-41 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 Hamap MF_00318 Enolase [eno]. 2 406 42.506 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 SMART SM01193 4 133 6.6E-88 T 10-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 Pfam PF03952 Enolase, N-terminal domain 4 133 4.5E-56 T 10-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 SUPERFAMILY SSF54826 3 137 5.16E-53 T 10-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 PIRSF PIRSF001400 1 413 1.1E-182 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 ProSitePatterns PS00164 Enolase signature. 329 342 - T 10-11-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 SMART SM01192 138 414 1.8E-184 T 10-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 405 6.2E-112 T 10-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 PANTHER PTHR11902 1 413 1.4E-226 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS08940 48d37f3bbeef7fc2a5269967d78c2f3e 414 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 405 5.2E-192 T 10-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 Gene3D G3DSA:3.90.1010.10 14 156 2.0E-37 T 10-11-2016 CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 Pfam PF04324 BFD-like [2Fe-2S] binding domain 159 201 4.9E-11 T 10-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 257 323 7.0E-24 T 10-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 SUPERFAMILY SSF82649 14 157 6.8E-37 T 10-11-2016 CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 Pfam PF01106 NifU-like domain 250 320 2.6E-20 T 10-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 PANTHER PTHR10093:SF1 4 205 1.2E-76 T 10-11-2016 CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 SUPERFAMILY SSF117916 240 323 1.96E-17 T 10-11-2016 CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 PIRSF PIRSF000375 12 323 5.6E-108 T 10-11-2016 IPR016217 Nitrogen fixation, NifU CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 Pfam PF01592 NifU-like N terminal domain 14 149 2.3E-47 T 10-11-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 CJM129_RS01160 8968729f62becd709ada8bad70b20b8e 323 PANTHER PTHR10093 4 205 1.2E-76 T 10-11-2016 CJM129_RS03545 68dd119cd977122e0f321ccbb743c8fb 212 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 197 4.4E-37 T 10-11-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CJM129_RS03545 68dd119cd977122e0f321ccbb743c8fb 212 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 1.2E-20 T 10-11-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 CJM129_RS03545 68dd119cd977122e0f321ccbb743c8fb 212 SUPERFAMILY SSF56784 1 200 3.37E-22 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS03545 68dd119cd977122e0f321ccbb743c8fb 212 Gene3D G3DSA:3.40.50.1000 81 211 4.5E-28 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS03545 68dd119cd977122e0f321ccbb743c8fb 212 PANTHER PTHR10000:SF10 1 209 1.8E-39 T 10-11-2016 CJM129_RS03545 68dd119cd977122e0f321ccbb743c8fb 212 Gene3D G3DSA:1.20.1440.100 15 80 1.1E-13 T 10-11-2016 CJM129_RS03545 68dd119cd977122e0f321ccbb743c8fb 212 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 184 1.1E-27 T 10-11-2016 CJM129_RS03545 68dd119cd977122e0f321ccbb743c8fb 212 PANTHER PTHR10000 1 209 1.8E-39 T 10-11-2016 CJM129_RS08950 0b7f09ba0a20acb4cb7de6577dfdda0a 286 Pfam PF02621 Menaquinone biosynthesis 4 260 4.6E-70 T 10-11-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 CJM129_RS08950 0b7f09ba0a20acb4cb7de6577dfdda0a 286 SUPERFAMILY SSF53850 4 262 9.42E-70 T 10-11-2016 CJM129_RS08950 0b7f09ba0a20acb4cb7de6577dfdda0a 286 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 3 266 35.041 T 10-11-2016 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 UniPathway: UPA00079 CJM129_RS08950 0b7f09ba0a20acb4cb7de6577dfdda0a 286 PANTHER PTHR37167 2 278 1.6E-44 T 10-11-2016 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Gene3D G3DSA:1.10.8.60 774 855 2.7E-25 T 10-11-2016 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 SMART SM00382 600 743 1.3E-9 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 SMART SM00382 199 343 1.1E-11 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 10-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 SMART SM01086 765 854 4.0E-28 T 10-11-2016 IPR019489 Clp ATPase, C-terminal CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 SUPERFAMILY SSF81923 7 156 1.02E-24 T 10-11-2016 IPR004176 Clp, N-terminal GO:0019538 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 316 5.3E-15 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Gene3D G3DSA:1.10.1780.10 8 149 1.2E-21 T 10-11-2016 IPR004176 Clp, N-terminal GO:0019538 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 5.4E-38 T 10-11-2016 IPR001270 ClpA/B family GO:0005524 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 5.4E-38 T 10-11-2016 IPR001270 ClpA/B family GO:0005524 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 5.4E-38 T 10-11-2016 IPR001270 ClpA/B family GO:0005524 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 5.4E-38 T 10-11-2016 IPR001270 ClpA/B family GO:0005524 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 10-11-2016 IPR028299 ClpA/B, conserved site 2 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 759 5.3E-52 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 SUPERFAMILY SSF52540 159 548 1.8E-93 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 PANTHER PTHR11638 1 856 0.0 T 10-11-2016 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Gene3D G3DSA:3.40.50.300 161 342 2.2E-51 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 SUPERFAMILY SSF52540 550 851 1.35E-74 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Gene3D G3DSA:1.10.8.60 344 428 1.9E-33 T 10-11-2016 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 1.5E-20 T 10-11-2016 IPR019489 Clp ATPase, C-terminal CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 98 145 0.0038 T 10-11-2016 IPR004176 Clp, N-terminal GO:0019538 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 70 1.7E-5 T 10-11-2016 IPR004176 Clp, N-terminal GO:0019538 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 PANTHER PTHR11638:SF18 1 856 0.0 T 10-11-2016 CJM129_RS02445 d874dc401009a9023fa629b58f6e7548 857 Gene3D G3DSA:3.40.50.300 553 773 5.7E-54 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08980 50994bebd1fe0a875bb677c4ce8af68e 391 PANTHER PTHR32468 2 384 6.7E-39 T 10-11-2016 CJM129_RS08980 50994bebd1fe0a875bb677c4ce8af68e 391 Pfam PF00999 Sodium/hydrogen exchanger family 18 385 1.0E-38 T 10-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CJM129_RS08980 50994bebd1fe0a875bb677c4ce8af68e 391 PANTHER PTHR32468:SF9 2 384 6.7E-39 T 10-11-2016 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 Pfam PF00318 Ribosomal protein S2 7 222 2.0E-95 T 10-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 Gene3D G3DSA:3.40.50.10490 156 246 2.5E-68 T 10-11-2016 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 Gene3D G3DSA:3.40.50.10490 21 97 2.5E-68 T 10-11-2016 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 PANTHER PTHR12534 1 258 4.1E-114 T 10-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 PRINTS PR00395 Ribosomal protein S2 signature 173 184 9.6E-37 T 10-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 PRINTS PR00395 Ribosomal protein S2 signature 85 102 9.6E-37 T 10-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 PRINTS PR00395 Ribosomal protein S2 signature 156 173 9.6E-37 T 10-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 PRINTS PR00395 Ribosomal protein S2 signature 35 44 9.6E-37 T 10-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 PRINTS PR00395 Ribosomal protein S2 signature 4 22 9.6E-37 T 10-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 PRINTS PR00395 Ribosomal protein S2 signature 194 208 9.6E-37 T 10-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 224 1.8E-108 T 10-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 10-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 SUPERFAMILY SSF52313 4 228 1.31E-94 T 10-11-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 Gene3D G3DSA:1.10.287.610 98 150 1.9E-22 T 10-11-2016 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 156 180 - T 10-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CJM129_RS06160 9f16f2d4e57540d0064b8c407c6c8791 263 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 39.615 T 10-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 CJM129_RS00380 b650bf93892f680edb6704ef157a332f 218 SUPERFAMILY SSF100950 42 217 2.47E-35 T 10-11-2016 CJM129_RS00380 b650bf93892f680edb6704ef157a332f 218 PANTHER PTHR32479 121 217 6.0E-14 T 10-11-2016 CJM129_RS00380 b650bf93892f680edb6704ef157a332f 218 PANTHER PTHR32479:SF11 121 217 6.0E-14 T 10-11-2016 CJM129_RS00380 b650bf93892f680edb6704ef157a332f 218 Gene3D G3DSA:3.40.50.10420 42 217 7.2E-39 T 10-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CJM129_RS00380 b650bf93892f680edb6704ef157a332f 218 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 48 217 1.6E-29 T 10-11-2016 IPR003741 LUD domain CJM129_RS00930 b79d5ffd031c109aea444ef49cb99963 394 Pfam PF00149 Calcineurin-like phosphoesterase 169 344 2.8E-13 T 10-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 CJM129_RS00930 b79d5ffd031c109aea444ef49cb99963 394 Gene3D G3DSA:3.40.50.300 49 117 7.5E-6 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00930 b79d5ffd031c109aea444ef49cb99963 394 PANTHER PTHR24032 154 277 6.0E-12 T 10-11-2016 CJM129_RS00930 b79d5ffd031c109aea444ef49cb99963 394 SUPERFAMILY SSF56300 141 349 2.81E-30 T 10-11-2016 IPR029052 Metallo-dependent phosphatase-like CJM129_RS00930 b79d5ffd031c109aea444ef49cb99963 394 PANTHER PTHR24032:SF31 154 277 6.0E-12 T 10-11-2016 CJM129_RS00930 b79d5ffd031c109aea444ef49cb99963 394 Gene3D G3DSA:3.60.21.10 160 391 2.9E-25 T 10-11-2016 IPR029052 Metallo-dependent phosphatase-like CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 Gene3D G3DSA:3.10.290.10 1 53 5.0E-17 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 Pfam PF00849 RNA pseudouridylate synthase 61 203 1.0E-14 T 10-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 SUPERFAMILY SSF55174 1 54 1.53E-11 T 10-11-2016 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 SUPERFAMILY SSF55120 60 250 3.17E-29 T 10-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 10-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 SMART SM00363 1 58 1.0E-10 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 PANTHER PTHR21600:SF2 179 244 1.5E-47 T 10-11-2016 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 PANTHER PTHR21600:SF2 1 151 1.5E-47 T 10-11-2016 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 Pfam PF01479 S4 domain 1 46 9.3E-9 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 PANTHER PTHR21600 1 151 1.5E-47 T 10-11-2016 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 PANTHER PTHR21600 179 244 1.5E-47 T 10-11-2016 CJM129_RS09105 bbf0575fed971423d2ed3c366b9060b3 253 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 235 9.2E-42 T 10-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CJM129_RS08720 8431a0553290c99773db6cc03670f498 296 Pfam PF02470 MlaD protein 39 115 2.9E-12 T 10-11-2016 IPR003399 Mce/MlaD CJM129_RS08720 8431a0553290c99773db6cc03670f498 296 PANTHER PTHR36698:SF2 2 283 2.1E-47 T 10-11-2016 CJM129_RS08720 8431a0553290c99773db6cc03670f498 296 PANTHER PTHR36698 2 283 2.1E-47 T 10-11-2016 CJM129_RS07195 2963d4d1a7e1f5e56b283c3a3655733a 413 Gene3D G3DSA:3.40.50.1820 272 341 3.8E-13 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07195 2963d4d1a7e1f5e56b283c3a3655733a 413 Gene3D G3DSA:3.40.50.1820 152 234 3.8E-13 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07195 2963d4d1a7e1f5e56b283c3a3655733a 413 Gene3D G3DSA:3.40.50.1820 23 80 3.8E-13 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07195 2963d4d1a7e1f5e56b283c3a3655733a 413 Pfam PF11144 Protein of unknown function (DUF2920) 6 410 1.6E-173 T 10-11-2016 IPR022605 Protein of unknown function DUF2920 CJM129_RS07195 2963d4d1a7e1f5e56b283c3a3655733a 413 SUPERFAMILY SSF53474 264 341 5.6E-15 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07195 2963d4d1a7e1f5e56b283c3a3655733a 413 SUPERFAMILY SSF53474 15 83 5.6E-15 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07195 2963d4d1a7e1f5e56b283c3a3655733a 413 SUPERFAMILY SSF53474 155 228 5.6E-15 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS02390 0b6bdcfda5327dad8f7dfd833cd13d65 425 Gene3D G3DSA:1.25.40.10 36 256 8.6E-18 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS02390 0b6bdcfda5327dad8f7dfd833cd13d65 425 Gene3D G3DSA:1.25.40.10 326 417 8.6E-18 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS02390 0b6bdcfda5327dad8f7dfd833cd13d65 425 SUPERFAMILY SSF48452 320 398 1.04E-7 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS02390 0b6bdcfda5327dad8f7dfd833cd13d65 425 SUPERFAMILY SSF48452 210 260 1.04E-7 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS03970 40db81e8e3c57b54a21c8ba7db32c940 384 Gene3D G3DSA:3.40.50.1950 2 176 4.2E-46 T 10-11-2016 IPR003382 Flavoprotein GO:0003824 CJM129_RS03970 40db81e8e3c57b54a21c8ba7db32c940 384 SUPERFAMILY SSF102645 166 383 1.31E-53 T 10-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CJM129_RS03970 40db81e8e3c57b54a21c8ba7db32c940 384 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 379 9.6E-96 T 10-11-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 CJM129_RS03970 40db81e8e3c57b54a21c8ba7db32c940 384 SUPERFAMILY SSF52507 2 172 1.15E-43 T 10-11-2016 IPR003382 Flavoprotein GO:0003824 CJM129_RS03970 40db81e8e3c57b54a21c8ba7db32c940 384 PANTHER PTHR14359:SF20 1 379 5.6E-82 T 10-11-2016 CJM129_RS03970 40db81e8e3c57b54a21c8ba7db32c940 384 Pfam PF02441 Flavoprotein 3 125 7.6E-26 T 10-11-2016 IPR003382 Flavoprotein GO:0003824 CJM129_RS03970 40db81e8e3c57b54a21c8ba7db32c940 384 Gene3D G3DSA:3.40.50.10300 177 382 1.6E-52 T 10-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CJM129_RS03970 40db81e8e3c57b54a21c8ba7db32c940 384 PANTHER PTHR14359 1 379 5.6E-82 T 10-11-2016 CJM129_RS03970 40db81e8e3c57b54a21c8ba7db32c940 384 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 182 356 3.6E-47 T 10-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 Gene3D G3DSA:3.30.70.870 303 397 1.0E-26 T 10-11-2016 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 Gene3D G3DSA:3.30.70.240 398 479 1.1E-30 T 10-11-2016 IPR000640 Translation elongation factor EFG, V domain CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 Pfam PF00009 Elongation factor Tu GTP binding domain 2 194 2.9E-54 T 10-11-2016 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 133 1.0E-24 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 SUPERFAMILY SSF54980 396 510 7.19E-27 T 10-11-2016 IPR009022 Elongation factor G, III-V domain CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 Gene3D G3DSA:2.40.50.250 480 574 5.9E-41 T 10-11-2016 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 SUPERFAMILY SSF52540 2 218 9.65E-56 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 7.1E-294 T 10-11-2016 IPR006298 GTP-binding protein TypA GO:0005525 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 Gene3D G3DSA:2.40.30.10 206 302 9.1E-25 T 10-11-2016 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 10-11-2016 IPR031157 Tr-type G domain, conserved site CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 PRINTS PR00315 GTP-binding elongation factor signature 70 80 1.4E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 PRINTS PR00315 GTP-binding elongation factor signature 122 131 1.4E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.4E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 PRINTS PR00315 GTP-binding elongation factor signature 50 58 1.4E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 PRINTS PR00315 GTP-binding elongation factor signature 86 97 1.4E-14 T 10-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 Gene3D G3DSA:3.40.50.300 2 205 2.9E-66 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 Pfam PF00679 Elongation factor G C-terminus 395 478 7.2E-22 T 10-11-2016 IPR000640 Translation elongation factor EFG, V domain CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 PANTHER PTHR23115:SF14 2 590 1.3E-269 T 10-11-2016 IPR006298 GTP-binding protein TypA GO:0005525 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 SUPERFAMILY SSF50447 181 300 8.73E-28 T 10-11-2016 IPR009000 Translation protein, beta-barrel domain CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 PANTHER PTHR23115 2 590 1.3E-269 T 10-11-2016 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 Pfam PF03144 Elongation factor Tu domain 2 218 286 2.2E-10 T 10-11-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 CJM129_RS00215 8d264b15bf02b2c689dce10a27e05a5f 602 SUPERFAMILY SSF54980 302 385 4.53E-9 T 10-11-2016 IPR009022 Elongation factor G, III-V domain CJM129_RS07820 92a7ce2f11e1448b6aebf95b051836b5 254 PANTHER PTHR30269 6 251 1.2E-60 T 10-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CJM129_RS07820 92a7ce2f11e1448b6aebf95b051836b5 254 PANTHER PTHR30269:SF0 6 251 1.2E-60 T 10-11-2016 CJM129_RS07820 92a7ce2f11e1448b6aebf95b051836b5 254 Pfam PF01925 Sulfite exporter TauE/SafE 14 247 2.6E-42 T 10-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CJM129_RS05800 fbe2a08f98278fd9f33c2331e966fcc9 96 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 2 91 24.504 T 10-11-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CJM129_RS05800 fbe2a08f98278fd9f33c2331e966fcc9 96 Gene3D G3DSA:3.30.1390.10 3 96 2.0E-36 T 10-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CJM129_RS05800 fbe2a08f98278fd9f33c2331e966fcc9 96 SUPERFAMILY SSF54736 11 95 3.92E-28 T 10-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CJM129_RS05800 fbe2a08f98278fd9f33c2331e966fcc9 96 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 14 91 1.2E-30 T 10-11-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 CJM129_RS05800 fbe2a08f98278fd9f33c2331e966fcc9 96 PANTHER PTHR33473 5 71 2.6E-22 T 10-11-2016 CJM129_RS07610 cffd56022bae2ef1e1cc9693af143c95 332 Gene3D G3DSA:3.40.50.720 223 296 4.9E-6 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07610 cffd56022bae2ef1e1cc9693af143c95 332 SUPERFAMILY SSF51735 223 305 1.49E-7 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07610 cffd56022bae2ef1e1cc9693af143c95 332 SUPERFAMILY SSF53335 26 192 8.97E-23 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07610 cffd56022bae2ef1e1cc9693af143c95 332 Gene3D G3DSA:3.40.50.150 27 195 7.1E-23 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07610 cffd56022bae2ef1e1cc9693af143c95 332 Pfam PF13489 Methyltransferase domain 19 174 3.5E-17 T 10-11-2016 CJM129_RS07610 cffd56022bae2ef1e1cc9693af143c95 332 Pfam PF08484 C-methyltransferase C-terminal domain 202 289 1.2E-5 T 10-11-2016 IPR013691 C-methyltransferase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00853 CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 SUPERFAMILY SSF55326 395 560 4.84E-45 T 10-11-2016 CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 SUPERFAMILY SSF56042 570 711 5.38E-20 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 SUPERFAMILY SSF56042 197 420 4.49E-51 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 PIRSF PIRSF001587 1 728 2.8E-283 T 10-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 Pfam PF02769 AIR synthase related protein, C-terminal domain 572 704 3.4E-9 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 Pfam PF02769 AIR synthase related protein, C-terminal domain 199 352 1.0E-31 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 Gene3D G3DSA:3.90.650.10 248 351 3.2E-5 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 728 277.372 T 10-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 PANTHER PTHR10099 11 718 6.9E-269 T 10-11-2016 CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 Gene3D G3DSA:3.30.1330.10 43 192 7.2E-45 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 Gene3D G3DSA:3.30.1330.10 409 556 1.4E-47 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 SUPERFAMILY SSF55326 9 192 8.52E-50 T 10-11-2016 CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 11 726 3.9E-290 T 10-11-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 PANTHER PTHR10099:SF2 11 718 6.9E-269 T 10-11-2016 CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 Pfam PF00586 AIR synthase related protein, N-terminal domain 447 552 2.4E-17 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS04635 bcb19ac5661f9f8920003fd294ad984c 728 Pfam PF00586 AIR synthase related protein, N-terminal domain 80 186 1.5E-20 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS08080 24b78650f1c1950d2a7ce9513f7d9101 296 PANTHER PTHR34353 1 236 1.2E-29 T 10-11-2016 CJM129_RS08080 24b78650f1c1950d2a7ce9513f7d9101 296 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 18 287 5.8E-21 T 10-11-2016 IPR002729 CRISPR-associated protein Cas1 CJM129_RS08080 24b78650f1c1950d2a7ce9513f7d9101 296 Pfam PF01867 CRISPR associated protein Cas1 13 243 1.7E-24 T 10-11-2016 IPR002729 CRISPR-associated protein Cas1 CJM129_RS08080 24b78650f1c1950d2a7ce9513f7d9101 296 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 7 279 1.4E-96 T 10-11-2016 IPR019855 CRISPR-associated protein Cas1, NMENI subtype CJM129_RS08080 24b78650f1c1950d2a7ce9513f7d9101 296 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 9 294 13.622 T 10-11-2016 IPR002729 CRISPR-associated protein Cas1 CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 SUPERFAMILY SSF51569 2 290 1.71E-94 T 10-11-2016 CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 PANTHER PTHR23416 3 289 5.8E-106 T 10-11-2016 CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 Pfam PF03102 NeuB family 24 266 7.7E-104 T 10-11-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 4 332 1.7E-157 T 10-11-2016 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 PANTHER PTHR23416:SF62 3 289 5.8E-106 T 10-11-2016 CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 SUPERFAMILY SSF51269 272 333 1.18E-18 T 10-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 SMART SM00858 280 334 0.0032 T 10-11-2016 IPR013974 SAF domain CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 Gene3D G3DSA:3.90.1210.10 281 332 6.7E-20 T 10-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 Pfam PF08666 SAF domain 281 332 5.4E-10 T 10-11-2016 IPR013974 SAF domain CJM129_RS07125 1185d867a3ee49056a55630ed082d4aa 334 Gene3D G3DSA:3.20.20.70 2 266 4.3E-111 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS07745 b227584f171d1a15dc792a42dacd0852 321 PANTHER PTHR11807 17 187 2.9E-48 T 10-11-2016 CJM129_RS07745 b227584f171d1a15dc792a42dacd0852 321 PANTHER PTHR11807:SF2 17 187 2.9E-48 T 10-11-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CJM129_RS07745 b227584f171d1a15dc792a42dacd0852 321 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 16 190 5.3E-50 T 10-11-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CJM129_RS07745 b227584f171d1a15dc792a42dacd0852 321 Gene3D G3DSA:3.40.50.620 6 167 1.4E-13 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS07745 b227584f171d1a15dc792a42dacd0852 321 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 250 18.657 T 10-11-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CJM129_RS07745 b227584f171d1a15dc792a42dacd0852 321 Pfam PF01171 PP-loop family 16 189 7.7E-56 T 10-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CJM129_RS07745 b227584f171d1a15dc792a42dacd0852 321 SUPERFAMILY SSF52402 10 204 2.07E-45 T 10-11-2016 CJM129_RS03980 b3e143a67e3d724c3bae184cf63ea1dd 222 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 221 3.9E-69 T 10-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CJM129_RS03980 b3e143a67e3d724c3bae184cf63ea1dd 222 SUPERFAMILY SSF64005 5 217 5.36E-66 T 10-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CJM129_RS03980 b3e143a67e3d724c3bae184cf63ea1dd 222 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 5 221 1.0E-70 T 10-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CJM129_RS03980 b3e143a67e3d724c3bae184cf63ea1dd 222 Gene3D G3DSA:3.40.1180.10 5 222 7.2E-74 T 10-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CJM129_RS03980 b3e143a67e3d724c3bae184cf63ea1dd 222 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 167 184 - T 10-11-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 CJM129_RS03980 b3e143a67e3d724c3bae184cf63ea1dd 222 PANTHER PTHR10291 5 222 1.6E-84 T 10-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CJM129_RS03980 b3e143a67e3d724c3bae184cf63ea1dd 222 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 3 222 35.49 T 10-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 CJM129_RS00440 99ba6ead547aee2ec53b473fde6e87fd 231 Gene3D G3DSA:3.40.470.10 6 230 4.6E-94 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS00440 99ba6ead547aee2ec53b473fde6e87fd 231 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 14 229 39.754 T 10-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CJM129_RS00440 99ba6ead547aee2ec53b473fde6e87fd 231 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 15 222 7.5E-86 T 10-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CJM129_RS00440 99ba6ead547aee2ec53b473fde6e87fd 231 Pfam PF03167 Uracil DNA glycosylase superfamily 64 217 1.4E-20 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS00440 99ba6ead547aee2ec53b473fde6e87fd 231 PANTHER PTHR11264 1 231 1.8E-114 T 10-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 CJM129_RS00440 99ba6ead547aee2ec53b473fde6e87fd 231 SUPERFAMILY SSF52141 12 229 1.02E-87 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS00440 99ba6ead547aee2ec53b473fde6e87fd 231 SMART SM00986 59 218 1.6E-28 T 10-11-2016 IPR005122 Uracil-DNA glycosylase-like CJM129_RS00440 99ba6ead547aee2ec53b473fde6e87fd 231 SMART SM00987 59 218 1.6E-28 T 10-11-2016 CJM129_RS00440 99ba6ead547aee2ec53b473fde6e87fd 231 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 67 76 - T 10-11-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 118 1.4E-40 T 10-11-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 231 2.7E-84 T 10-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 2.7E-84 T 10-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 107 128 2.7E-84 T 10-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 31 53 2.7E-84 T 10-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 72 99 2.7E-84 T 10-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 2.7E-84 T 10-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 2.7E-84 T 10-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 Gene3D G3DSA:3.40.50.720 139 262 1.2E-55 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 PANTHER PTHR10025 2 282 6.6E-159 T 10-11-2016 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 SUPERFAMILY SSF53223 2 119 1.06E-38 T 10-11-2016 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 Gene3D G3DSA:3.40.192.10 5 138 3.9E-48 T 10-11-2016 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 10-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 73 98 - T 10-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 121 280 3.8E-70 T 10-11-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 281 39.226 T 10-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 CJM129_RS04135 e4802cf8a10c6508d0fba93ad38f055f 282 SUPERFAMILY SSF51735 120 278 5.15E-52 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 PANTHER PTHR11070 561 663 7.3E-112 T 10-11-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 PANTHER PTHR11070 3 495 7.3E-112 T 10-11-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 Gene3D G3DSA:3.40.50.300 4 139 3.1E-59 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 Gene3D G3DSA:3.40.50.300 173 267 3.1E-59 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 SUPERFAMILY SSF52540 3 414 6.98E-111 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 SUPERFAMILY SSF52540 494 664 6.98E-111 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 262 1.4E-43 T 10-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 Pfam PF13361 UvrD-like helicase C-terminal domain 269 648 3.0E-45 T 10-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 Gene3D G3DSA:3.40.50.300 272 381 8.6E-49 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03765 eeb791016786268fcb6292a5ebc5e10f 676 Gene3D G3DSA:3.40.50.300 584 665 8.6E-49 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 PANTHER PTHR11695 25 358 8.3E-123 T 10-11-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 PANTHER PTHR11695:SF261 25 358 8.3E-123 T 10-11-2016 CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 SUPERFAMILY SSF51735 161 323 1.06E-33 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 154 7.4E-26 T 10-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 SMART SM00829 18 353 1.3E-4 T 10-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 SUPERFAMILY SSF50129 19 180 5.33E-49 T 10-11-2016 IPR011032 GroES-like CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 71 85 - T 10-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 Gene3D G3DSA:3.40.50.720 193 288 7.4E-16 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 Pfam PF00107 Zinc-binding dehydrogenase 197 318 1.8E-13 T 10-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJM129_RS08215 c9b21b527889e4e8cb4a201c0787d367 358 Gene3D G3DSA:3.90.180.10 8 192 1.4E-63 T 10-11-2016 IPR011032 GroES-like CJM129_RS08505 58ee163d58ba4003eab4e5725676ed7b 386 Gene3D G3DSA:3.10.400.10 2 101 1.7E-8 T 10-11-2016 CJM129_RS08505 58ee163d58ba4003eab4e5725676ed7b 386 Pfam PF01747 ATP-sulfurylase 136 339 9.5E-41 T 10-11-2016 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 CJM129_RS08505 58ee163d58ba4003eab4e5725676ed7b 386 PANTHER PTHR11055 1 357 4.2E-12 T 10-11-2016 CJM129_RS08505 58ee163d58ba4003eab4e5725676ed7b 386 SUPERFAMILY SSF88697 2 129 7.46E-20 T 10-11-2016 IPR015947 PUA-like domain CJM129_RS08505 58ee163d58ba4003eab4e5725676ed7b 386 SUPERFAMILY SSF52374 133 345 5.36E-50 T 10-11-2016 CJM129_RS08505 58ee163d58ba4003eab4e5725676ed7b 386 PANTHER PTHR11055:SF19 1 357 4.2E-12 T 10-11-2016 CJM129_RS08505 58ee163d58ba4003eab4e5725676ed7b 386 Gene3D G3DSA:3.40.50.620 140 350 3.6E-48 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 3 488 2.3E-190 T 10-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 284 1.1E-66 T 10-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 SUPERFAMILY SSF64158 76 293 2.09E-72 T 10-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 Pfam PF01676 Metalloenzyme superfamily 4 482 1.6E-70 T 10-11-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 Gene3D G3DSA:3.40.1450.10 77 295 1.1E-76 T 10-11-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 SUPERFAMILY SSF53649 3 76 1.83E-62 T 10-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 SUPERFAMILY SSF53649 295 487 1.83E-62 T 10-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 PIRSF PIRSF001492 1 492 1.8E-184 T 10-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 492 42.296 T 10-11-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 Gene3D G3DSA:3.40.720.10 3 76 4.0E-75 T 10-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 Gene3D G3DSA:3.40.720.10 299 487 4.0E-75 T 10-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJM129_RS02105 8faaa2dcb462837d04bdb3c84f7e8604 492 PANTHER PTHR31637 1 487 5.2E-207 T 10-11-2016 CJM129_RS09040 0bd47fd9cfd2926d9b413bde0a3ed5e0 77 PANTHER PTHR12903 4 73 4.8E-24 T 10-11-2016 CJM129_RS09040 0bd47fd9cfd2926d9b413bde0a3ed5e0 77 SMART SM00739 6 33 8.4E-7 T 10-11-2016 IPR005824 KOW CJM129_RS09040 0bd47fd9cfd2926d9b413bde0a3ed5e0 77 Pfam PF00467 KOW motif 9 40 1.6E-8 T 10-11-2016 IPR005824 KOW CJM129_RS09040 0bd47fd9cfd2926d9b413bde0a3ed5e0 77 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 43 75 1.8E-8 T 10-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09040 0bd47fd9cfd2926d9b413bde0a3ed5e0 77 ProSitePatterns PS01108 Ribosomal protein L24 signature. 10 27 - T 10-11-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09040 0bd47fd9cfd2926d9b413bde0a3ed5e0 77 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 76 9.3E-29 T 10-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09040 0bd47fd9cfd2926d9b413bde0a3ed5e0 77 Gene3D G3DSA:2.30.30.30 4 76 4.3E-20 T 10-11-2016 IPR014722 Ribosomal protein L2 domain 2 CJM129_RS09040 0bd47fd9cfd2926d9b413bde0a3ed5e0 77 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 5 77 15.068 T 10-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09040 0bd47fd9cfd2926d9b413bde0a3ed5e0 77 SUPERFAMILY SSF50104 4 75 1.33E-24 T 10-11-2016 IPR008991 Translation protein SH3-like domain CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 Pfam PF00905 Penicillin binding protein transpeptidase domain 320 591 4.1E-36 T 10-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 PANTHER PTHR32282 1 611 1.5E-189 T 10-11-2016 CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 SUPERFAMILY SSF53955 39 244 1.18E-71 T 10-11-2016 IPR023346 Lysozyme-like domain CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 SUPERFAMILY SSF56601 209 231 2.73E-110 T 10-11-2016 IPR012338 Beta-lactamase/transpeptidase-like CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 SUPERFAMILY SSF56601 259 620 2.73E-110 T 10-11-2016 IPR012338 Beta-lactamase/transpeptidase-like CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 Gene3D G3DSA:3.40.710.10 231 626 9.7E-114 T 10-11-2016 IPR012338 Beta-lactamase/transpeptidase-like CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 Gene3D G3DSA:1.10.3810.10 52 230 4.5E-66 T 10-11-2016 CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 PANTHER PTHR32282:SF5 1 611 1.5E-189 T 10-11-2016 CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 62 596 2.4E-193 T 10-11-2016 CJM129_RS02440 a291ef11f45dd3e5cbd9850e410da76d 643 Pfam PF00912 Transglycosylase 52 227 3.8E-58 T 10-11-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 777 854 3.2E-20 T 10-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 Pfam PF07559 Flagellar basal body protein FlaE 616 734 4.7E-12 T 10-11-2016 IPR011491 Flagellar hook protein FlgE CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 Pfam PF00460 Flagella basal body rod protein 5 35 2.3E-10 T 10-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 303 3.5E-36 T 10-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 609 837 3.5E-37 T 10-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 SUPERFAMILY SSF117143 604 816 4.45E-53 T 10-11-2016 CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 SUPERFAMILY SSF117143 91 190 4.45E-53 T 10-11-2016 CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 TIGRFAM TIGR02489 flgE_epsilon: flagellar hook protein FlgE 1 856 0.0 T 10-11-2016 IPR012835 Flagellar hook FlgE GO:0009288|GO:0044781 CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 PANTHER PTHR30435:SF1 1 137 5.7E-88 T 10-11-2016 CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 PANTHER PTHR30435 1 137 5.7E-88 T 10-11-2016 CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 PANTHER PTHR30435 731 855 5.7E-88 T 10-11-2016 CJM129_RS09215 acea6693361c803bc8cef84c918347d9 856 PANTHER PTHR30435:SF1 731 855 5.7E-88 T 10-11-2016 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 SUPERFAMILY SSF51569 8 294 5.76E-94 T 10-11-2016 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 292 62.891 T 10-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 SMART SM01130 5 294 1.6E-130 T 10-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 PANTHER PTHR12128:SF34 1 295 8.5E-117 T 10-11-2016 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 Gene3D G3DSA:3.20.20.70 4 295 2.2E-105 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 292 1.1E-108 T 10-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 10-11-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 1.8E-34 T 10-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 1.8E-34 T 10-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 1.8E-34 T 10-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 1.8E-34 T 10-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 168 - T 10-11-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 PIRSF PIRSF001365 1 297 6.5E-85 T 10-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 Pfam PF00701 Dihydrodipicolinate synthetase family 8 291 2.1E-88 T 10-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CJM129_RS03910 4e8c1c99aa822d9e71ea76fca52be969 298 PANTHER PTHR12128 1 295 8.5E-117 T 10-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 CJM129_RS02690 83c7dcd9406811e7de30789a19d13921 442 PANTHER PTHR11206 9 440 6.5E-75 T 10-11-2016 CJM129_RS02690 83c7dcd9406811e7de30789a19d13921 442 PIRSF PIRSF006603 9 440 9.5E-61 T 10-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS02690 83c7dcd9406811e7de30789a19d13921 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 415 5.7E-46 T 10-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS02690 83c7dcd9406811e7de30789a19d13921 442 Pfam PF01554 MatE 20 181 2.2E-24 T 10-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS02690 83c7dcd9406811e7de30789a19d13921 442 Pfam PF01554 MatE 243 394 3.0E-15 T 10-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS02690 83c7dcd9406811e7de30789a19d13921 442 PANTHER PTHR11206:SF132 9 440 6.5E-75 T 10-11-2016 CJM129_RS03210 b81daa6f15ba1f0f3d7d419cc93542c1 180 Pfam PF00227 Proteasome subunit 1 176 9.4E-27 T 10-11-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 CJM129_RS03210 b81daa6f15ba1f0f3d7d419cc93542c1 180 PIRSF PIRSF039093 1 179 6.9E-82 T 10-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CJM129_RS03210 b81daa6f15ba1f0f3d7d419cc93542c1 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 173 1.1E-76 T 10-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CJM129_RS03210 b81daa6f15ba1f0f3d7d419cc93542c1 180 Gene3D G3DSA:3.60.20.10 5 177 4.1E-76 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS03210 b81daa6f15ba1f0f3d7d419cc93542c1 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 39.77 T 10-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CJM129_RS03210 b81daa6f15ba1f0f3d7d419cc93542c1 180 SUPERFAMILY SSF56235 1 176 1.59E-52 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS03210 b81daa6f15ba1f0f3d7d419cc93542c1 180 PANTHER PTHR32194 2 171 1.8E-92 T 10-11-2016 CJM129_RS08020 2001643242666ea3169e62fbd347b667 310 PANTHER PTHR30074:SF2 45 299 9.2E-24 T 10-11-2016 CJM129_RS08020 2001643242666ea3169e62fbd347b667 310 SUPERFAMILY SSF81342 86 300 1.65E-43 T 10-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CJM129_RS08020 2001643242666ea3169e62fbd347b667 310 Gene3D G3DSA:1.20.950.20 85 300 3.7E-54 T 10-11-2016 CJM129_RS08020 2001643242666ea3169e62fbd347b667 310 PANTHER PTHR30074 45 299 9.2E-24 T 10-11-2016 CJM129_RS08020 2001643242666ea3169e62fbd347b667 310 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 89 295 4.1E-86 T 10-11-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CJM129_RS08020 2001643242666ea3169e62fbd347b667 310 Pfam PF01292 Prokaryotic cytochrome b561 93 274 1.2E-24 T 10-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CJM129_RS05810 6dfb2113f9fcf6e1affceb562f83c240 215 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 29 189 2.6E-54 T 10-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CJM129_RS05810 6dfb2113f9fcf6e1affceb562f83c240 215 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 215 56.675 T 10-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CJM129_RS05810 6dfb2113f9fcf6e1affceb562f83c240 215 PANTHER PTHR30098 1 199 2.7E-46 T 10-11-2016 CJM129_RS05810 6dfb2113f9fcf6e1affceb562f83c240 215 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 31 204 1.8E-49 T 10-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 CJM129_RS05810 6dfb2113f9fcf6e1affceb562f83c240 215 SUPERFAMILY SSF55729 14 208 5.3E-65 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS03640 9718fa35ae33ef44ae71fb6165f510a8 696 Pfam PF00593 TonB dependent receptor 424 693 5.3E-32 T 10-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJM129_RS03640 9718fa35ae33ef44ae71fb6165f510a8 696 Gene3D G3DSA:2.170.130.10 21 154 1.3E-35 T 10-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJM129_RS03640 9718fa35ae33ef44ae71fb6165f510a8 696 SUPERFAMILY SSF56935 29 696 9.16E-113 T 10-11-2016 CJM129_RS03640 9718fa35ae33ef44ae71fb6165f510a8 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 151 9.0E-24 T 10-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJM129_RS03640 9718fa35ae33ef44ae71fb6165f510a8 696 Gene3D G3DSA:2.40.170.20 155 696 1.4E-90 T 10-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJM129_RS03640 9718fa35ae33ef44ae71fb6165f510a8 696 PANTHER PTHR32552 8 696 1.6E-65 T 10-11-2016 CJM129_RS03640 9718fa35ae33ef44ae71fb6165f510a8 696 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 679 696 - T 10-11-2016 IPR010917 TonB-dependent receptor, conserved site CJM129_RS03640 9718fa35ae33ef44ae71fb6165f510a8 696 PANTHER PTHR32552:SF15 8 696 1.6E-65 T 10-11-2016 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 Gene3D G3DSA:3.90.740.10 207 390 9.4E-50 T 10-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 PANTHER PTHR11946 274 915 0.0 T 10-11-2016 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 10-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 913 18.763 T 10-11-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 26 649 4.7E-235 T 10-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 PANTHER PTHR11946 5 254 0.0 T 10-11-2016 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 SUPERFAMILY SSF50677 208 403 4.08E-43 T 10-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 842 2.5E-256 T 10-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 Gene3D G3DSA:1.10.730.10 650 778 7.0E-28 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 SUPERFAMILY SSF52374 402 655 6.76E-124 T 10-11-2016 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 SUPERFAMILY SSF52374 1 203 6.76E-124 T 10-11-2016 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 PANTHER PTHR11946:SF11 274 915 0.0 T 10-11-2016 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 Pfam PF08264 Anticodon-binding domain of tRNA 689 838 4.6E-14 T 10-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 569 578 1.7E-31 T 10-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 533 546 1.7E-31 T 10-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 400 415 1.7E-31 T 10-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 233 256 1.7E-31 T 10-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 1.7E-31 T 10-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 Gene3D G3DSA:3.40.50.620 13 201 1.9E-126 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 Gene3D G3DSA:3.40.50.620 405 644 1.9E-126 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 SUPERFAMILY SSF47323 660 915 1.74E-45 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS05570 022e9d8bed27426bb5f3d74cbff0e327 917 PANTHER PTHR11946:SF11 5 254 0.0 T 10-11-2016 CJM129_RS04945 6ccc9b7bd657cf8da3d36da97d6452b3 95 SUPERFAMILY SSF140931 30 83 3.4E-6 T 10-11-2016 IPR003812 Fido domain CJM129_RS04945 6ccc9b7bd657cf8da3d36da97d6452b3 95 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 4 85 4.4E-11 T 10-11-2016 IPR006440 Death on curing protein GO:0016301 CJM129_RS04945 6ccc9b7bd657cf8da3d36da97d6452b3 95 Pfam PF02661 Fic/DOC family 4 83 2.2E-10 T 10-11-2016 IPR003812 Fido domain CJM129_RS04945 6ccc9b7bd657cf8da3d36da97d6452b3 95 Gene3D G3DSA:1.10.3290.10 29 76 2.0E-4 T 10-11-2016 IPR003812 Fido domain CJM129_RS06090 1cd03399e6aa5fd2aae49da95528093f 200 PANTHER PTHR30353:SF13 1 191 4.4E-58 T 10-11-2016 CJM129_RS06090 1cd03399e6aa5fd2aae49da95528093f 200 Pfam PF09335 SNARE associated Golgi protein 33 159 8.4E-23 T 10-11-2016 IPR032816 SNARE associated Golgi protein CJM129_RS06090 1cd03399e6aa5fd2aae49da95528093f 200 PANTHER PTHR30353 1 191 4.4E-58 T 10-11-2016 IPR032818 DedA family CJM129_RS08515 837aba86a81fbd01a0a52a883449972d 87 PANTHER PTHR33398 1 87 7.3E-22 T 10-11-2016 CJM129_RS08515 837aba86a81fbd01a0a52a883449972d 87 Pfam PF01649 Ribosomal protein S20 2 84 1.6E-22 T 10-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08515 837aba86a81fbd01a0a52a883449972d 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 1.8E-24 T 10-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08515 837aba86a81fbd01a0a52a883449972d 87 Gene3D G3DSA:1.20.58.110 1 86 2.6E-24 T 10-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08515 837aba86a81fbd01a0a52a883449972d 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 87 4.0E-20 T 10-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08515 837aba86a81fbd01a0a52a883449972d 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 14.898 T 10-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08515 837aba86a81fbd01a0a52a883449972d 87 SUPERFAMILY SSF46992 3 86 3.79E-24 T 10-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS06435 537540465c04a8af6b5e8a87796e4596 316 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 57 255 3.7E-16 T 10-11-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA CJM129_RS06435 537540465c04a8af6b5e8a87796e4596 316 SUPERFAMILY SSF53335 2 297 3.49E-55 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS02420 16e102ff219d451c9230fcac0e28bbc9 288 Gene3D G3DSA:3.30.360.10 126 286 3.5E-17 T 10-11-2016 CJM129_RS02420 16e102ff219d451c9230fcac0e28bbc9 288 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 115 2.4E-18 T 10-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 CJM129_RS02420 16e102ff219d451c9230fcac0e28bbc9 288 PANTHER PTHR22604 1 285 1.2E-37 T 10-11-2016 CJM129_RS02420 16e102ff219d451c9230fcac0e28bbc9 288 SUPERFAMILY SSF51735 1 170 2.34E-35 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02420 16e102ff219d451c9230fcac0e28bbc9 288 SUPERFAMILY SSF55347 120 231 7.85E-6 T 10-11-2016 CJM129_RS02420 16e102ff219d451c9230fcac0e28bbc9 288 PANTHER PTHR22604:SF14 1 285 1.2E-37 T 10-11-2016 CJM129_RS02420 16e102ff219d451c9230fcac0e28bbc9 288 Gene3D G3DSA:3.40.50.720 1 125 1.3E-29 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 Gene3D G3DSA:3.40.50.300 133 308 2.2E-55 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 PANTHER PTHR32071 1 430 1.5E-165 T 10-11-2016 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 Pfam PF02954 Bacterial regulatory protein, Fis family 389 428 1.8E-4 T 10-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 SUPERFAMILY SSF46689 382 431 1.43E-5 T 10-11-2016 IPR009057 Homeodomain-like GO:0003677 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 10-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 SMART SM00382 156 299 7.4E-7 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 Gene3D G3DSA:3.40.50.2300 2 129 2.6E-27 T 10-11-2016 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 Pfam PF00158 Sigma-54 interaction domain 138 302 2.5E-68 T 10-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 10-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 SUPERFAMILY SSF52540 139 377 1.57E-66 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 SMART SM00448 1 109 4.4E-27 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 SUPERFAMILY SSF52172 2 181 5.27E-30 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 Gene3D G3DSA:1.10.10.60 385 431 4.3E-7 T 10-11-2016 IPR009057 Homeodomain-like GO:0003677 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 Pfam PF00072 Response regulator receiver domain 4 110 3.8E-22 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS05385 07d6489b60b642f4b2728f53392863bc 433 Gene3D G3DSA:1.10.8.60 309 382 1.2E-20 T 10-11-2016 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 PANTHER PTHR11444:SF25 4 462 2.7E-256 T 10-11-2016 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 Pfam PF00206 Lyase 11 342 2.2E-106 T 10-11-2016 IPR022761 Fumarate lyase, N-terminal CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 Gene3D G3DSA:1.20.200.10 140 399 1.0E-88 T 10-11-2016 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 7.5E-7 T 10-11-2016 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 PRINTS PR00145 Argininosuccinate lyase family signature 317 333 7.5E-7 T 10-11-2016 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 7.5E-7 T 10-11-2016 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 Pfam PF10415 Fumarase C C-terminus 408 460 1.3E-23 T 10-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 Gene3D G3DSA:1.10.275.10 2 139 9.0E-58 T 10-11-2016 IPR024083 Fumarase/histidase, N-terminal CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 Gene3D G3DSA:1.10.40.30 408 466 3.8E-25 T 10-11-2016 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 PANTHER PTHR11444 4 462 2.7E-256 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 10-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 4 468 5.0E-236 T 10-11-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 4.6E-31 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 4.6E-31 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 4.6E-31 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 4.6E-31 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00445 fee7790afb3b0270035fac307152c4fe 468 SUPERFAMILY SSF48557 3 460 8.95E-150 T 10-11-2016 IPR008948 L-Aspartase-like GO:0003824 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 SUPERFAMILY SSF69065 2 157 2.79E-47 T 10-11-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 221 3.2E-70 T 10-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 Gene3D G3DSA:1.10.1520.10 2 147 6.7E-48 T 10-11-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 SMART SM00535 19 151 8.9E-46 T 10-11-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 PANTHER PTHR11207 4 224 4.3E-66 T 10-11-2016 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 10-11-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 SUPERFAMILY SSF54768 108 222 2.83E-23 T 10-11-2016 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 Gene3D G3DSA:3.30.160.20 154 221 2.3E-22 T 10-11-2016 IPR014720 Double-stranded RNA-binding domain CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 218 28.777 T 10-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 SMART SM00358 155 222 5.9E-16 T 10-11-2016 IPR014720 Double-stranded RNA-binding domain CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 Pfam PF14622 Ribonuclease-III-like 17 139 3.0E-36 T 10-11-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 CJM129_RS08655 d73fae2719bd143b2d8771dbab9ca3d9 224 Pfam PF00035 Double-stranded RNA binding motif 155 221 3.8E-13 T 10-11-2016 IPR014720 Double-stranded RNA-binding domain CJM129_RS02145 75aba123c0fe2862b3420bf363999cfa 77 Pfam PF00550 Phosphopantetheine attachment site 6 72 2.2E-13 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS02145 75aba123c0fe2862b3420bf363999cfa 77 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 20.291 T 10-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CJM129_RS02145 75aba123c0fe2862b3420bf363999cfa 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 10-11-2016 IPR006162 Phosphopantetheine attachment site CJM129_RS02145 75aba123c0fe2862b3420bf363999cfa 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 4.4E-29 T 10-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CJM129_RS02145 75aba123c0fe2862b3420bf363999cfa 77 Gene3D G3DSA:1.10.1200.10 3 75 1.4E-26 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS02145 75aba123c0fe2862b3420bf363999cfa 77 PANTHER PTHR20863 3 75 9.3E-22 T 10-11-2016 CJM129_RS02145 75aba123c0fe2862b3420bf363999cfa 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 74 4.0E-13 T 10-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 CJM129_RS02145 75aba123c0fe2862b3420bf363999cfa 77 SUPERFAMILY SSF47336 2 74 4.97E-19 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS06540 51aac4fab10f77c72b2b0117e6da132b 151 SUPERFAMILY SSF52788 1 146 1.09E-41 T 10-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJM129_RS06540 51aac4fab10f77c72b2b0117e6da132b 151 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 146 2.0E-30 T 10-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJM129_RS06540 51aac4fab10f77c72b2b0117e6da132b 151 Gene3D G3DSA:3.40.50.270 1 149 7.0E-47 T 10-11-2016 CJM129_RS06540 51aac4fab10f77c72b2b0117e6da132b 151 SMART SM00226 2 148 8.9E-29 T 10-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJM129_RS06540 51aac4fab10f77c72b2b0117e6da132b 151 PANTHER PTHR11717 1 146 4.0E-33 T 10-11-2016 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 PRINTS PR00955 Flagellar motor switch protein FliM signature 92 108 4.6E-28 T 10-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 4.6E-28 T 10-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 4.6E-28 T 10-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 PRINTS PR00955 Flagellar motor switch protein FliM signature 117 136 4.6E-28 T 10-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 Pfam PF02154 Flagellar motor switch protein FliM 41 231 6.3E-75 T 10-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 Gene3D G3DSA:3.40.1550.10 48 231 1.0E-6 T 10-11-2016 IPR028976 CheC-like domain CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 PANTHER PTHR30034:SF0 1 344 9.6E-94 T 10-11-2016 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 PIRSF PIRSF002888 1 334 1.9E-111 T 10-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 SUPERFAMILY SSF103039 47 231 2.17E-28 T 10-11-2016 IPR028976 CheC-like domain CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 324 2.6E-104 T 10-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 Gene3D G3DSA:2.30.330.10 243 328 8.7E-10 T 10-11-2016 CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 255 324 8.2E-14 T 10-11-2016 IPR001543 Surface presentation of antigen (SpoA) CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 SUPERFAMILY SSF101801 251 329 4.19E-13 T 10-11-2016 IPR001543 Surface presentation of antigen (SpoA) CJM129_RS00315 9232b059637597c5e6a915fb3575c2ae 359 PANTHER PTHR30034 1 344 9.6E-94 T 10-11-2016 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 Gene3D G3DSA:1.10.1670.10 120 206 1.8E-30 T 10-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 184 200 6.0E-4 T 10-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 184 200 - T 10-11-2016 IPR004035 Endonuclease III, iron-sulphur binding site CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 TIGRFAM TIGR01083 nth: endonuclease III 3 191 2.9E-67 T 10-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 Gene3D G3DSA:1.10.340.30 20 119 4.4E-31 T 10-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 PIRSF PIRSF001435 1 208 1.7E-44 T 10-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 PANTHER PTHR10359 16 208 3.6E-62 T 10-11-2016 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 Hamap MF_00942 Endonuclease III [nth]. 1 206 33.8 T 10-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 SUPERFAMILY SSF48150 5 205 9.42E-63 T 10-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 SMART SM00525 183 203 7.0E-5 T 10-11-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 SMART SM00478 36 182 4.4E-45 T 10-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CJM129_RS02880 599417e41833ee190ba7106324da2d06 208 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 163 9.5E-22 T 10-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 CJM129_RS04665 b044d212b66c0843cb7b68a2f14b295d 44 PANTHER PTHR14503 1 44 1.5E-17 T 10-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS04665 b044d212b66c0843cb7b68a2f14b295d 44 Pfam PF00468 Ribosomal protein L34 1 44 4.3E-23 T 10-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS04665 b044d212b66c0843cb7b68a2f14b295d 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 10-11-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS04665 b044d212b66c0843cb7b68a2f14b295d 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.646 T 10-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS04665 b044d212b66c0843cb7b68a2f14b295d 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 2.0E-16 T 10-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS04665 b044d212b66c0843cb7b68a2f14b295d 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.5E-25 T 10-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 2 191 2.7E-106 T 10-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 2 192 43.547 T 10-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 111 124 - T 10-11-2016 IPR033135 ClpP, histidine active site CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 PANTHER PTHR10381 1 192 8.8E-129 T 10-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 SUPERFAMILY SSF52096 2 190 1.24E-71 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 89 100 - T 10-11-2016 IPR018215 ClpP, Ser active site CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 Gene3D G3DSA:3.90.226.10 3 191 6.4E-88 T 10-11-2016 IPR029045 ClpP/crotonase-like domain CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 PANTHER PTHR10381:SF22 1 192 8.8E-129 T 10-11-2016 CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 Pfam PF00574 Clp protease 11 191 1.4E-87 T 10-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 PRINTS PR00127 Clp protease catalytic subunit P signature 89 106 5.8E-54 T 10-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 PRINTS PR00127 Clp protease catalytic subunit P signature 110 129 5.8E-54 T 10-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 PRINTS PR00127 Clp protease catalytic subunit P signature 18 33 5.8E-54 T 10-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 PRINTS PR00127 Clp protease catalytic subunit P signature 167 186 5.8E-54 T 10-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJM129_RS00970 4fc7cfafb45a23c076f996e67642757b 194 PRINTS PR00127 Clp protease catalytic subunit P signature 58 78 5.8E-54 T 10-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 Gene3D G3DSA:3.40.50.300 171 357 6.1E-61 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 Gene3D G3DSA:1.10.8.60 358 424 9.7E-23 T 10-11-2016 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 PANTHER PTHR23076 2 620 1.3E-261 T 10-11-2016 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 SUPERFAMILY SSF52540 173 443 8.3E-68 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 Pfam PF01434 Peptidase family M41 410 617 8.5E-68 T 10-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 PANTHER PTHR23076:SF10 2 620 1.3E-261 T 10-11-2016 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 SUPERFAMILY SSF140990 431 621 2.75E-59 T 10-11-2016 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 ProSitePatterns PS00674 AAA-protein family signature. 319 337 - T 10-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 125 618 6.2E-216 T 10-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 16 625 34.445 T 10-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 Pfam PF06480 FtsH Extracellular 23 118 1.7E-8 T 10-11-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 347 1.4E-43 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS05845 ef859a06e7efb1a32c885f538030c646 645 SMART SM00382 210 351 4.2E-24 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS00335 c73489fdd3d01d77e60e88b0037b3751 484 Gene3D G3DSA:3.40.50.300 219 293 1.4E-6 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00335 c73489fdd3d01d77e60e88b0037b3751 484 Gene3D G3DSA:3.40.50.300 294 475 1.8E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00335 c73489fdd3d01d77e60e88b0037b3751 484 PANTHER PTHR11564:SF3 184 475 4.5E-63 T 10-11-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CJM129_RS00335 c73489fdd3d01d77e60e88b0037b3751 484 SUPERFAMILY SSF52540 278 475 8.55E-34 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00335 c73489fdd3d01d77e60e88b0037b3751 484 SMART SM00382 281 438 7.7E-6 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS00335 c73489fdd3d01d77e60e88b0037b3751 484 Pfam PF00448 SRP54-type protein, GTPase domain 283 474 1.7E-42 T 10-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS00335 c73489fdd3d01d77e60e88b0037b3751 484 SMART SM00962 282 475 2.6E-60 T 10-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS00335 c73489fdd3d01d77e60e88b0037b3751 484 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 5 370 1.4E-69 T 10-11-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 CJM129_RS00335 c73489fdd3d01d77e60e88b0037b3751 484 PANTHER PTHR11564 184 475 4.5E-63 T 10-11-2016 CJM129_RS00720 4b40f84cc724802352b22a6cfc5e7c3a 284 SUPERFAMILY SSF52540 4 216 9.26E-52 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00720 4b40f84cc724802352b22a6cfc5e7c3a 284 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS00720 4b40f84cc724802352b22a6cfc5e7c3a 284 Pfam PF00005 ABC transporter 19 159 3.2E-28 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS00720 4b40f84cc724802352b22a6cfc5e7c3a 284 PANTHER PTHR24220 5 215 1.4E-62 T 10-11-2016 CJM129_RS00720 4b40f84cc724802352b22a6cfc5e7c3a 284 PANTHER PTHR24220:SF566 5 215 1.4E-62 T 10-11-2016 CJM129_RS00720 4b40f84cc724802352b22a6cfc5e7c3a 284 SMART SM00382 28 207 6.1E-13 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS00720 4b40f84cc724802352b22a6cfc5e7c3a 284 Gene3D G3DSA:3.40.50.300 4 215 1.0E-53 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 PIRSF PIRSF004862 1 554 8.0E-118 T 10-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 5 552 4.4E-125 T 10-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 Pfam PF08345 Flagellar M-ring protein C-terminal 260 421 3.1E-38 T 10-11-2016 IPR013556 Flagellar M-ring C-terminal CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 Pfam PF01514 Secretory protein of YscJ/FliF family 29 221 2.9E-64 T 10-11-2016 IPR006182 Secretory protein YscJ/FliF CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 PRINTS PR01009 Flagellar M-ring protein signature 341 365 1.1E-28 T 10-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 PRINTS PR01009 Flagellar M-ring protein signature 268 286 1.1E-28 T 10-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 PRINTS PR01009 Flagellar M-ring protein signature 198 216 1.1E-28 T 10-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 PRINTS PR01009 Flagellar M-ring protein signature 155 169 1.1E-28 T 10-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 PRINTS PR01009 Flagellar M-ring protein signature 123 141 1.1E-28 T 10-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 PANTHER PTHR30046 1 554 3.9E-119 T 10-11-2016 CJM129_RS01510 b594ae2e1cfce0704c6760431edf2697 560 PANTHER PTHR30046:SF0 1 554 3.9E-119 T 10-11-2016 CJM129_RS03070 0b8dd0f263e596b038cd55512f3dd3b8 127 SUPERFAMILY SSF53098 1 125 4.55E-24 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS03070 0b8dd0f263e596b038cd55512f3dd3b8 127 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 125 6.0E-16 T 10-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CJM129_RS03070 0b8dd0f263e596b038cd55512f3dd3b8 127 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 127 16.545 T 10-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CJM129_RS03070 0b8dd0f263e596b038cd55512f3dd3b8 127 SMART SM00732 1 97 1.5E-29 T 10-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CJM129_RS03070 0b8dd0f263e596b038cd55512f3dd3b8 127 Gene3D G3DSA:3.30.420.140 1 125 7.8E-29 T 10-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 CJM129_RS03070 0b8dd0f263e596b038cd55512f3dd3b8 127 PANTHER PTHR33317 1 125 1.3E-16 T 10-11-2016 CJM129_RS03070 0b8dd0f263e596b038cd55512f3dd3b8 127 Pfam PF03652 Holliday junction resolvase 1 125 1.5E-26 T 10-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 Gene3D G3DSA:3.40.140.10 2 170 8.6E-26 T 10-11-2016 CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 SUPERFAMILY SSF53927 2 168 1.29E-34 T 10-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 Gene3D G3DSA:3.40.430.10 173 257 1.1E-11 T 10-11-2016 IPR024072 Dihydrofolate reductase-like domain CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 PANTHER PTHR11079:SF10 1 64 3.5E-19 T 10-11-2016 CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 6 322 5.4E-113 T 10-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 PANTHER PTHR11079 85 225 3.5E-19 T 10-11-2016 CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 PANTHER PTHR11079:SF10 85 225 3.5E-19 T 10-11-2016 CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 PANTHER PTHR11079 1 64 3.5E-19 T 10-11-2016 CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 123 5.5E-18 T 10-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 CJM129_RS08590 8c61c9a4a70cb8b85d33a090569f478d 326 SUPERFAMILY SSF53597 173 324 9.48E-18 T 10-11-2016 IPR024072 Dihydrofolate reductase-like domain CJM129_RS02675 aa5e0c8fd3da9ceed55225c641a837d1 361 Pfam PF13515 Fusaric acid resistance protein-like 208 333 3.6E-24 T 10-11-2016 CJM129_RS04005 bf928d2c61cb8f600996ae8b3023d3be 137 SMART SM00881 10 103 6.6E-4 T 10-11-2016 IPR003781 CoA-binding GO:0048037 CJM129_RS04005 bf928d2c61cb8f600996ae8b3023d3be 137 Pfam PF13380 CoA binding domain 15 129 4.5E-29 T 10-11-2016 IPR003781 CoA-binding GO:0048037 CJM129_RS04005 bf928d2c61cb8f600996ae8b3023d3be 137 PANTHER PTHR33303 1 130 9.5E-25 T 10-11-2016 CJM129_RS04005 bf928d2c61cb8f600996ae8b3023d3be 137 Gene3D G3DSA:3.40.50.720 2 131 2.9E-36 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS04005 bf928d2c61cb8f600996ae8b3023d3be 137 SUPERFAMILY SSF51735 10 132 6.4E-30 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 39 503 5.3E-136 T 10-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 SUPERFAMILY SSF82866 314 513 3.79E-41 T 10-11-2016 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 PANTHER PTHR30081 1 89 3.7E-116 T 10-11-2016 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 PANTHER PTHR30081 137 198 3.7E-116 T 10-11-2016 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 PANTHER PTHR30081 234 526 3.7E-116 T 10-11-2016 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 PRINTS PR00702 Acriflavin resistance protein family signature 353 376 1.6E-7 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 PRINTS PR00702 Acriflavin resistance protein family signature 481 504 1.6E-7 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 1.6E-7 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 267 497 3.6E-80 T 10-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 Gene3D G3DSA:1.20.1640.10 313 516 3.4E-24 T 10-11-2016 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 PANTHER PTHR30081:SF1 137 198 3.7E-116 T 10-11-2016 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 520 41.247 T 10-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 Pfam PF02355 Protein export membrane protein 340 501 6.0E-17 T 10-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 PANTHER PTHR30081:SF1 1 89 3.7E-116 T 10-11-2016 CJM129_RS05730 26bcac52d178a798523454bce4195e34 526 PANTHER PTHR30081:SF1 234 526 3.7E-116 T 10-11-2016 CJM129_RS03515 56ce9274bc061c83e5e336696f75eb65 348 PANTHER PTHR30006:SF10 8 348 6.9E-86 T 10-11-2016 CJM129_RS03515 56ce9274bc061c83e5e336696f75eb65 348 PANTHER PTHR30006 8 348 6.9E-86 T 10-11-2016 CJM129_RS03515 56ce9274bc061c83e5e336696f75eb65 348 Gene3D G3DSA:3.40.190.10 135 270 3.3E-24 T 10-11-2016 CJM129_RS03515 56ce9274bc061c83e5e336696f75eb65 348 SUPERFAMILY SSF53850 32 341 2.4E-48 T 10-11-2016 CJM129_RS03515 56ce9274bc061c83e5e336696f75eb65 348 Gene3D G3DSA:3.40.190.10 271 316 3.7E-23 T 10-11-2016 CJM129_RS03515 56ce9274bc061c83e5e336696f75eb65 348 Gene3D G3DSA:3.40.190.10 2 130 3.7E-23 T 10-11-2016 CJM129_RS03515 56ce9274bc061c83e5e336696f75eb65 348 Pfam PF13343 Bacterial extracellular solute-binding protein 85 330 4.4E-49 T 10-11-2016 CJM129_RS04100 680f035bb14534f92acd9e4b5f5768c3 93 SUPERFAMILY SSF160544 8 87 1.96E-24 T 10-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CJM129_RS04100 680f035bb14534f92acd9e4b5f5768c3 93 TIGRFAM TIGR00789 flhB_rel: FlhB domain protein 8 89 1.1E-40 T 10-11-2016 IPR004683 Type III secretion system substrate exporter FlhB-like CJM129_RS04100 680f035bb14534f92acd9e4b5f5768c3 93 Gene3D G3DSA:3.40.1690.10 9 87 3.0E-27 T 10-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CJM129_RS04100 680f035bb14534f92acd9e4b5f5768c3 93 PANTHER PTHR30531 8 91 1.2E-31 T 10-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJM129_RS04100 680f035bb14534f92acd9e4b5f5768c3 93 Pfam PF01312 FlhB HrpN YscU SpaS Family 11 83 1.0E-19 T 10-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJM129_RS06890 838a473e35c620c5e9000db7a174e477 390 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 29 366 1.5E-73 T 10-11-2016 IPR006427 Phage portal protein, HK97 CJM129_RS06890 838a473e35c620c5e9000db7a174e477 390 Pfam PF04860 Phage portal protein 36 360 4.1E-90 T 10-11-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein CJM129_RS04820 2d23d5e11d8c8421bb23aa2b6977449b 451 Pfam PF06969 HemN C-terminal domain 358 423 2.6E-7 T 10-11-2016 IPR010723 HemN, C-terminal CJM129_RS04820 2d23d5e11d8c8421bb23aa2b6977449b 451 SUPERFAMILY SSF102114 9 437 1.23E-122 T 10-11-2016 CJM129_RS04820 2d23d5e11d8c8421bb23aa2b6977449b 451 PANTHER PTHR13932 9 444 1.0E-190 T 10-11-2016 CJM129_RS04820 2d23d5e11d8c8421bb23aa2b6977449b 451 Pfam PF04055 Radical SAM superfamily 51 223 2.8E-18 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS04820 2d23d5e11d8c8421bb23aa2b6977449b 451 PIRSF PIRSF000167 1 447 2.4E-160 T 10-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 CJM129_RS04820 2d23d5e11d8c8421bb23aa2b6977449b 451 SMART SM00729 45 267 3.8E-54 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS04820 2d23d5e11d8c8421bb23aa2b6977449b 451 PANTHER PTHR13932:SF6 9 444 1.0E-190 T 10-11-2016 CJM129_RS04820 2d23d5e11d8c8421bb23aa2b6977449b 451 Gene3D G3DSA:3.80.30.20 46 278 4.2E-27 T 10-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe CJM129_RS04820 2d23d5e11d8c8421bb23aa2b6977449b 451 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 4 451 1.5E-189 T 10-11-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 CJM129_RS01665 c1cd3cf51ffda682bcc36b9a53e793b4 249 Pfam PF00290 Tryptophan synthase alpha chain 9 233 8.2E-70 T 10-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CJM129_RS01665 c1cd3cf51ffda682bcc36b9a53e793b4 249 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 246 2.7E-68 T 10-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CJM129_RS01665 c1cd3cf51ffda682bcc36b9a53e793b4 249 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 8 249 28.52 T 10-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CJM129_RS01665 c1cd3cf51ffda682bcc36b9a53e793b4 249 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 42 55 - T 10-11-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 CJM129_RS01665 c1cd3cf51ffda682bcc36b9a53e793b4 249 SUPERFAMILY SSF51366 7 241 8.76E-69 T 10-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJM129_RS01665 c1cd3cf51ffda682bcc36b9a53e793b4 249 Gene3D G3DSA:3.20.20.70 9 245 3.4E-78 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS00880 fd586715d2ccf59b78478f1f1aaac2c4 538 PANTHER PTHR30183 7 537 5.3E-109 T 10-11-2016 CJM129_RS00880 fd586715d2ccf59b78478f1f1aaac2c4 538 SUPERFAMILY SSF161098 298 526 2.52E-26 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS00880 fd586715d2ccf59b78478f1f1aaac2c4 538 PANTHER PTHR30183:SF2 7 537 5.3E-109 T 10-11-2016 CJM129_RS00880 fd586715d2ccf59b78478f1f1aaac2c4 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 259 1.1E-12 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS00880 fd586715d2ccf59b78478f1f1aaac2c4 538 SUPERFAMILY SSF161098 9 264 9.68E-38 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS00880 fd586715d2ccf59b78478f1f1aaac2c4 538 Gene3D G3DSA:1.10.3720.10 296 534 1.9E-23 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS00880 fd586715d2ccf59b78478f1f1aaac2c4 538 Gene3D G3DSA:1.10.3720.10 12 267 1.9E-28 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS05895 73ffbfa6e695ce227889cf6fd0616538 365 SUPERFAMILY SSF53756 7 361 2.04E-63 T 10-11-2016 CJM129_RS05895 73ffbfa6e695ce227889cf6fd0616538 365 Gene3D G3DSA:3.40.50.2000 193 344 6.7E-22 T 10-11-2016 CJM129_RS05895 73ffbfa6e695ce227889cf6fd0616538 365 Pfam PF00534 Glycosyl transferases group 1 190 345 1.1E-32 T 10-11-2016 IPR001296 Glycosyl transferase, family 1 CJM129_RS05895 73ffbfa6e695ce227889cf6fd0616538 365 Pfam PF13439 Glycosyltransferase Family 4 14 180 3.5E-7 T 10-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CJM129_RS05895 73ffbfa6e695ce227889cf6fd0616538 365 PANTHER PTHR12526 3 364 1.7E-51 T 10-11-2016 CJM129_RS02380 8803806e8871c60618fcaec6336ac81a 233 Pfam PF05175 Methyltransferase small domain 21 129 1.4E-19 T 10-11-2016 IPR007848 Methyltransferase small domain GO:0008168 CJM129_RS02380 8803806e8871c60618fcaec6336ac81a 233 PANTHER PTHR18895:SF75 13 220 1.6E-38 T 10-11-2016 CJM129_RS02380 8803806e8871c60618fcaec6336ac81a 233 SUPERFAMILY SSF53335 9 196 3.94E-24 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS02380 8803806e8871c60618fcaec6336ac81a 233 PANTHER PTHR18895 13 220 1.6E-38 T 10-11-2016 CJM129_RS02380 8803806e8871c60618fcaec6336ac81a 233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 102 108 - T 10-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJM129_RS02380 8803806e8871c60618fcaec6336ac81a 233 Gene3D G3DSA:3.40.50.150 19 222 4.2E-45 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS05735 862e31102f033e6c8cb7461fdbf9a341 90 PANTHER PTHR33909:SF1 5 90 6.3E-22 T 10-11-2016 CJM129_RS05735 862e31102f033e6c8cb7461fdbf9a341 90 SMART SM01323 5 88 3.4E-41 T 10-11-2016 IPR003849 Preprotein translocase YajC CJM129_RS05735 862e31102f033e6c8cb7461fdbf9a341 90 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 5 88 6.6E-32 T 10-11-2016 IPR003849 Preprotein translocase YajC CJM129_RS05735 862e31102f033e6c8cb7461fdbf9a341 90 PRINTS PR01853 Bacterial YajC preprotein translocase signature 27 45 8.3E-17 T 10-11-2016 IPR003849 Preprotein translocase YajC CJM129_RS05735 862e31102f033e6c8cb7461fdbf9a341 90 PRINTS PR01853 Bacterial YajC preprotein translocase signature 7 27 8.3E-17 T 10-11-2016 IPR003849 Preprotein translocase YajC CJM129_RS05735 862e31102f033e6c8cb7461fdbf9a341 90 Pfam PF02699 Preprotein translocase subunit 9 86 6.2E-30 T 10-11-2016 IPR003849 Preprotein translocase YajC CJM129_RS05735 862e31102f033e6c8cb7461fdbf9a341 90 PANTHER PTHR33909 5 90 6.3E-22 T 10-11-2016 CJM129_RS03745 2041df2d274ef92e8644c7ccad3c94d9 303 PANTHER PTHR30450:SF1 33 261 7.0E-97 T 10-11-2016 CJM129_RS03745 2041df2d274ef92e8644c7ccad3c94d9 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 251 3.1E-17 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS03745 2041df2d274ef92e8644c7ccad3c94d9 303 PANTHER PTHR30450 33 261 7.0E-97 T 10-11-2016 CJM129_RS03745 2041df2d274ef92e8644c7ccad3c94d9 303 SUPERFAMILY SSF161098 46 240 4.58E-41 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS03745 2041df2d274ef92e8644c7ccad3c94d9 303 Gene3D G3DSA:1.10.3720.10 48 249 8.3E-37 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04940 33a6624669c1eb30b7218c098dbd1f7d 75 SUPERFAMILY SSF142921 11 74 2.88E-8 T 10-11-2016 IPR008893 WGR domain CJM129_RS04940 33a6624669c1eb30b7218c098dbd1f7d 75 Gene3D G3DSA:2.20.140.10 7 75 1.5E-10 T 10-11-2016 IPR008893 WGR domain CJM129_RS04940 33a6624669c1eb30b7218c098dbd1f7d 75 Pfam PF05406 WGR domain 4 74 1.1E-7 T 10-11-2016 IPR008893 WGR domain CJM129_RS01150 c8c2f29264b65734a7b79d45391a91ae 211 PANTHER PTHR11002 1 211 1.8E-68 T 10-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJM129_RS01150 c8c2f29264b65734a7b79d45391a91ae 211 PANTHER PTHR11002:SF13 1 211 1.8E-68 T 10-11-2016 CJM129_RS01150 c8c2f29264b65734a7b79d45391a91ae 211 SUPERFAMILY SSF53056 1 207 6.15E-62 T 10-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJM129_RS01150 c8c2f29264b65734a7b79d45391a91ae 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 84 104 - T 10-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJM129_RS01150 c8c2f29264b65734a7b79d45391a91ae 211 SMART SM00947 27 196 3.5E-63 T 10-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJM129_RS01150 c8c2f29264b65734a7b79d45391a91ae 211 Pfam PF00484 Carbonic anhydrase 34 192 3.9E-48 T 10-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJM129_RS01150 c8c2f29264b65734a7b79d45391a91ae 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 10-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJM129_RS01150 c8c2f29264b65734a7b79d45391a91ae 211 Gene3D G3DSA:3.40.1050.10 1 204 3.0E-64 T 10-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJM129_RS07765 6f9452eaa920fa4bd3d543229193e860 372 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 193 365 7.8E-11 T 10-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS07765 6f9452eaa920fa4bd3d543229193e860 372 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 13 191 1.2E-37 T 10-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS07765 6f9452eaa920fa4bd3d543229193e860 372 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 10 370 26.912 T 10-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS07765 6f9452eaa920fa4bd3d543229193e860 372 PANTHER PTHR13326 30 187 9.6E-33 T 10-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS07765 6f9452eaa920fa4bd3d543229193e860 372 SUPERFAMILY SSF55120 10 216 1.44E-82 T 10-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS07765 6f9452eaa920fa4bd3d543229193e860 372 SUPERFAMILY SSF55120 246 367 1.44E-82 T 10-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS07765 6f9452eaa920fa4bd3d543229193e860 372 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 15 369 9.4E-56 T 10-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS07765 6f9452eaa920fa4bd3d543229193e860 372 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 82 95 - T 10-11-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS02425 8d23886356afaf9cae1d15e4cb290b6d 357 Gene3D G3DSA:3.40.640.10 12 242 2.9E-79 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS02425 8d23886356afaf9cae1d15e4cb290b6d 357 SUPERFAMILY SSF53383 8 356 5.5E-107 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS02425 8d23886356afaf9cae1d15e4cb290b6d 357 PANTHER PTHR30244 1 352 2.2E-102 T 10-11-2016 CJM129_RS02425 8d23886356afaf9cae1d15e4cb290b6d 357 PIRSF PIRSF000390 1 357 1.4E-97 T 10-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJM129_RS02425 8d23886356afaf9cae1d15e4cb290b6d 357 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 353 3.1E-111 T 10-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJM129_RS02425 8d23886356afaf9cae1d15e4cb290b6d 357 Gene3D G3DSA:3.90.1150.10 244 354 4.4E-28 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS02425 8d23886356afaf9cae1d15e4cb290b6d 357 PANTHER PTHR30244:SF15 1 352 2.2E-102 T 10-11-2016 CJM129_RS01885 41b112b13d94ffbb6ad25ee35204434d 209 PANTHER PTHR34265 68 204 2.1E-12 T 10-11-2016 CJM129_RS01885 41b112b13d94ffbb6ad25ee35204434d 209 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 205 15.393 T 10-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CJM129_RS01885 41b112b13d94ffbb6ad25ee35204434d 209 Gene3D G3DSA:3.30.420.40 1 58 9.4E-24 T 10-11-2016 CJM129_RS01885 41b112b13d94ffbb6ad25ee35204434d 209 Gene3D G3DSA:3.30.420.40 67 206 6.1E-39 T 10-11-2016 CJM129_RS01885 41b112b13d94ffbb6ad25ee35204434d 209 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 1 201 4.9E-27 T 10-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CJM129_RS01885 41b112b13d94ffbb6ad25ee35204434d 209 SUPERFAMILY SSF53067 1 82 4.27E-30 T 10-11-2016 CJM129_RS01885 41b112b13d94ffbb6ad25ee35204434d 209 SUPERFAMILY SSF53067 84 204 2.85E-28 T 10-11-2016 CJM129_RS01885 41b112b13d94ffbb6ad25ee35204434d 209 Pfam PF03309 Type III pantothenate kinase 69 164 7.4E-13 T 10-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 303 310 - T 10-11-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 SUPERFAMILY SSF55021 260 347 1.28E-18 T 10-11-2016 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 PANTHER PTHR21022 4 349 4.2E-102 T 10-11-2016 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 Gene3D G3DSA:3.40.190.10 85 173 9.8E-30 T 10-11-2016 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 SMART SM00830 8 87 1.1E-30 T 10-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 SUPERFAMILY SSF48600 3 90 6.11E-23 T 10-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 PIRSF PIRSF001500 1 357 9.2E-136 T 10-11-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 241 263 - T 10-11-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 Gene3D G3DSA:3.30.70.260 273 349 8.6E-24 T 10-11-2016 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 Pfam PF01817 Chorismate mutase type II 8 84 1.6E-24 T 10-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 Gene3D G3DSA:1.20.59.10 2 84 1.4E-23 T 10-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 Pfam PF00800 Prephenate dehydratase 89 265 8.3E-62 T 10-11-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 TIGRFAM TIGR01807 CM_P2: chorismate mutase 4 77 4.7E-34 T 10-11-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 PANTHER PTHR21022:SF0 4 349 4.2E-102 T 10-11-2016 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 SUPERFAMILY SSF53850 88 265 3.04E-55 T 10-11-2016 CJM129_RS01500 e5fcd1f13cbdb3d59a447abd24e7c667 357 Gene3D G3DSA:3.40.190.10 174 253 1.0E-24 T 10-11-2016 CJM129_RS01775 85b619dbacd29c88a94f86b2bab3d641 389 SUPERFAMILY SSF56059 11 162 1.2E-64 T 10-11-2016 CJM129_RS01775 85b619dbacd29c88a94f86b2bab3d641 389 SUPERFAMILY SSF56059 274 386 1.2E-64 T 10-11-2016 CJM129_RS01775 85b619dbacd29c88a94f86b2bab3d641 389 PANTHER PTHR30094:SF0 46 389 5.7E-53 T 10-11-2016 CJM129_RS01775 85b619dbacd29c88a94f86b2bab3d641 389 PANTHER PTHR30094 46 389 5.7E-53 T 10-11-2016 CJM129_RS01775 85b619dbacd29c88a94f86b2bab3d641 389 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 11 387 2.1E-122 T 10-11-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CJM129_RS01775 85b619dbacd29c88a94f86b2bab3d641 389 SUPERFAMILY SSF52440 178 287 6.62E-16 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS07570 174851561511e4985af665a75bf28109 200 Pfam PF07722 Peptidase C26 46 108 6.0E-9 T 10-11-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 CJM129_RS07570 174851561511e4985af665a75bf28109 200 Pfam PF07722 Peptidase C26 129 180 2.4E-8 T 10-11-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 CJM129_RS07570 174851561511e4985af665a75bf28109 200 SUPERFAMILY SSF52317 42 196 9.72E-25 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS07570 174851561511e4985af665a75bf28109 200 Gene3D G3DSA:3.40.50.880 53 197 7.0E-26 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS07570 174851561511e4985af665a75bf28109 200 PANTHER PTHR11922:SF18 55 193 1.4E-14 T 10-11-2016 CJM129_RS07570 174851561511e4985af665a75bf28109 200 PANTHER PTHR11922 55 193 1.4E-14 T 10-11-2016 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 SMART SM00998 349 441 2.1E-34 T 10-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 439 3.5E-25 T 10-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 Gene3D G3DSA:1.20.200.10 90 355 2.6E-82 T 10-11-2016 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 Gene3D G3DSA:1.10.275.10 3 89 3.7E-30 T 10-11-2016 IPR024083 Fumarase/histidase, N-terminal CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 2.7E-7 T 10-11-2016 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 2.7E-7 T 10-11-2016 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 2.7E-7 T 10-11-2016 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 2.7E-7 T 10-11-2016 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 6.8E-23 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 6.8E-23 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 6.8E-23 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 6.8E-23 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PANTHER PTHR11444 1 436 2.4E-141 T 10-11-2016 IPR000362 Fumarate lyase family CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 Gene3D G3DSA:1.10.40.30 356 441 1.6E-32 T 10-11-2016 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 SUPERFAMILY SSF48557 3 441 3.46E-123 T 10-11-2016 IPR008948 L-Aspartase-like GO:0003824 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 439 1.6E-161 T 10-11-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 Pfam PF00206 Lyase 15 282 3.2E-47 T 10-11-2016 IPR022761 Fumarate lyase, N-terminal CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 10-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 CJM129_RS00110 6f2f7a8b0a70804505be1381d9de9209 442 PANTHER PTHR11444:SF2 1 436 2.4E-141 T 10-11-2016 CJM129_RS01440 e721f2dd2c4a4f8818023c98eb2214e7 228 Gene3D G3DSA:3.40.50.150 25 225 1.1E-21 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01440 e721f2dd2c4a4f8818023c98eb2214e7 228 SUPERFAMILY SSF53335 6 176 3.7E-19 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01440 e721f2dd2c4a4f8818023c98eb2214e7 228 Pfam PF13489 Methyltransferase domain 26 158 1.8E-8 T 10-11-2016 CJM129_RS01440 e721f2dd2c4a4f8818023c98eb2214e7 228 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 2 225 1.6E-56 T 10-11-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 CJM129_RS04460 9b542ec6c5a7b8dda1e6a11944e5a943 145 PIRSF PIRSF005384 4 144 5.4E-56 T 10-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CJM129_RS04460 9b542ec6c5a7b8dda1e6a11944e5a943 145 SUPERFAMILY SSF89623 4 142 1.06E-53 T 10-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CJM129_RS04460 9b542ec6c5a7b8dda1e6a11944e5a943 145 Gene3D G3DSA:3.40.1400.10 3 142 1.4E-60 T 10-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CJM129_RS04460 9b542ec6c5a7b8dda1e6a11944e5a943 145 PANTHER PTHR30345 1 142 3.4E-61 T 10-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CJM129_RS04460 9b542ec6c5a7b8dda1e6a11944e5a943 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 142 5.5E-56 T 10-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CJM129_RS04460 9b542ec6c5a7b8dda1e6a11944e5a943 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 5 142 5.0E-52 T 10-11-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CJM129_RS04460 9b542ec6c5a7b8dda1e6a11944e5a943 145 Pfam PF02502 Ribose/Galactose Isomerase 6 141 2.6E-54 T 10-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 CJM129_RS06625 71c54e0739b1846370969c51d157636c 405 SUPERFAMILY SSF51261 179 401 2.3E-20 T 10-11-2016 IPR011055 Duplicated hybrid motif CJM129_RS06625 71c54e0739b1846370969c51d157636c 405 Gene3D G3DSA:2.70.70.10 259 402 4.7E-20 T 10-11-2016 CJM129_RS06625 71c54e0739b1846370969c51d157636c 405 Pfam PF01551 Peptidase family M23 320 385 9.8E-13 T 10-11-2016 IPR016047 Peptidase M23 CJM129_RS08335 24c6f472f7ca455468eb4e6ceb273596 75 Pfam PF16514 putative NADH-ubiquinone oxidoreductase chain E 1 72 4.8E-34 T 10-11-2016 IPR032424 Putative NADH-ubiquinone oxidoreductase chain E CJM129_RS08335 24c6f472f7ca455468eb4e6ceb273596 75 Gene3D G3DSA:3.30.110.40 18 73 8.6E-4 T 10-11-2016 IPR001455 TusA-like domain CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 306 4.3E-22 T 10-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 296 2.0E-16 T 10-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 Gene3D G3DSA:2.170.120.12 53 173 1.4E-31 T 10-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 63 155 5.9E-20 T 10-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 SUPERFAMILY SSF47789 250 320 6.93E-20 T 10-11-2016 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 SUPERFAMILY SSF56553 53 174 1.83E-30 T 10-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 315 29.089 T 10-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 SMART SM00662 23 230 1.1E-71 T 10-11-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 Gene3D G3DSA:3.30.1360.10 10 51 1.1E-23 T 10-11-2016 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 Gene3D G3DSA:3.30.1360.10 174 227 1.1E-23 T 10-11-2016 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 Gene3D G3DSA:1.10.150.20 247 316 1.9E-22 T 10-11-2016 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 PANTHER PTHR32108 11 328 6.2E-67 T 10-11-2016 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 SUPERFAMILY SSF55257 175 227 6.28E-22 T 10-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 SUPERFAMILY SSF55257 9 53 6.28E-22 T 10-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 313 6.1E-90 T 10-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 PANTHER PTHR32108:SF0 11 328 6.2E-67 T 10-11-2016 CJM129_RS08435 2df9bac98a8d9f1bd5b87ddd580ba69d 337 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 223 5.2E-13 T 10-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS02790 575291709659454e57fed10422ba1f03 342 Gene3D G3DSA:2.40.10.240 67 142 1.0E-12 T 10-11-2016 CJM129_RS02790 575291709659454e57fed10422ba1f03 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 5 342 37.629 T 10-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS02790 575291709659454e57fed10422ba1f03 342 Pfam PF02547 Queuosine biosynthesis protein 7 341 3.9E-105 T 10-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS02790 575291709659454e57fed10422ba1f03 342 PANTHER PTHR30307:SF0 6 342 7.9E-115 T 10-11-2016 CJM129_RS02790 575291709659454e57fed10422ba1f03 342 SUPERFAMILY SSF111337 8 342 7.46E-110 T 10-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS02790 575291709659454e57fed10422ba1f03 342 PANTHER PTHR30307 6 342 7.9E-115 T 10-11-2016 CJM129_RS02790 575291709659454e57fed10422ba1f03 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 7 342 8.4E-119 T 10-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 CJM129_RS02790 575291709659454e57fed10422ba1f03 342 Gene3D G3DSA:3.40.1780.10 188 342 1.9E-74 T 10-11-2016 CJM129_RS02790 575291709659454e57fed10422ba1f03 342 Gene3D G3DSA:3.40.1780.10 6 65 1.9E-74 T 10-11-2016 CJM129_RS01400 0fca7f94a859a629e6bb882ff502ffe3 216 Pfam PF00899 ThiF family 12 140 2.4E-22 T 10-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CJM129_RS01400 0fca7f94a859a629e6bb882ff502ffe3 216 PANTHER PTHR10953:SF145 1 148 1.3E-31 T 10-11-2016 CJM129_RS01400 0fca7f94a859a629e6bb882ff502ffe3 216 PANTHER PTHR10953:SF145 174 186 1.3E-31 T 10-11-2016 CJM129_RS01400 0fca7f94a859a629e6bb882ff502ffe3 216 Gene3D G3DSA:3.40.50.720 2 213 3.9E-26 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS01400 0fca7f94a859a629e6bb882ff502ffe3 216 SUPERFAMILY SSF69572 2 213 4.58E-38 T 10-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CJM129_RS01400 0fca7f94a859a629e6bb882ff502ffe3 216 PANTHER PTHR10953 1 148 1.3E-31 T 10-11-2016 CJM129_RS01400 0fca7f94a859a629e6bb882ff502ffe3 216 PANTHER PTHR10953 174 186 1.3E-31 T 10-11-2016 CJM129_RS07120 a30bc5cb942af36cb372ea28d3fd8a95 224 Pfam PF13489 Methyltransferase domain 28 191 9.9E-12 T 10-11-2016 CJM129_RS07120 a30bc5cb942af36cb372ea28d3fd8a95 224 SUPERFAMILY SSF53335 2 198 2.52E-24 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07120 a30bc5cb942af36cb372ea28d3fd8a95 224 Gene3D G3DSA:3.40.50.150 28 175 8.6E-18 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06970 89e0ef81fa44ca908b700c59cc53a948 186 PANTHER PTHR11241 1 186 1.4E-72 T 10-11-2016 CJM129_RS06970 89e0ef81fa44ca908b700c59cc53a948 186 SUPERFAMILY SSF51283 3 185 2.62E-50 T 10-11-2016 IPR029054 dUTPase-like CJM129_RS06970 89e0ef81fa44ca908b700c59cc53a948 186 Gene3D G3DSA:2.70.40.10 3 185 4.2E-66 T 10-11-2016 IPR029054 dUTPase-like CJM129_RS06970 89e0ef81fa44ca908b700c59cc53a948 186 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 184 1.8E-62 T 10-11-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 CJM129_RS06970 89e0ef81fa44ca908b700c59cc53a948 186 PANTHER PTHR11241:SF1 1 186 1.4E-72 T 10-11-2016 CJM129_RS06970 89e0ef81fa44ca908b700c59cc53a948 186 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 29.272 T 10-11-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 CJM129_RS06970 89e0ef81fa44ca908b700c59cc53a948 186 Pfam PF00692 dUTPase 78 178 1.5E-8 T 10-11-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 CJM129_RS02480 284b57a9623d827dcb8b857b7af02854 230 PANTHER PTHR10434:SF11 6 230 1.1E-33 T 10-11-2016 CJM129_RS02480 284b57a9623d827dcb8b857b7af02854 230 Gene3D G3DSA:3.40.1130.10 66 201 3.5E-22 T 10-11-2016 CJM129_RS02480 284b57a9623d827dcb8b857b7af02854 230 SMART SM00563 65 179 4.2E-32 T 10-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CJM129_RS02480 284b57a9623d827dcb8b857b7af02854 230 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 61 176 9.4E-31 T 10-11-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 CJM129_RS02480 284b57a9623d827dcb8b857b7af02854 230 Pfam PF01553 Acyltransferase 66 176 7.0E-22 T 10-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CJM129_RS02480 284b57a9623d827dcb8b857b7af02854 230 PANTHER PTHR10434 6 230 1.1E-33 T 10-11-2016 CJM129_RS02480 284b57a9623d827dcb8b857b7af02854 230 SUPERFAMILY SSF69593 9 226 1.16E-36 T 10-11-2016 CJM129_RS05940 e31882a270fbd92a9f25bc3d079cc543 397 PANTHER PTHR22916:SF24 1 80 4.7E-39 T 10-11-2016 CJM129_RS05940 e31882a270fbd92a9f25bc3d079cc543 397 PANTHER PTHR22916:SF24 134 308 4.7E-39 T 10-11-2016 CJM129_RS05940 e31882a270fbd92a9f25bc3d079cc543 397 PANTHER PTHR22916 1 80 4.7E-39 T 10-11-2016 CJM129_RS05940 e31882a270fbd92a9f25bc3d079cc543 397 PANTHER PTHR22916 134 308 4.7E-39 T 10-11-2016 CJM129_RS05940 e31882a270fbd92a9f25bc3d079cc543 397 SUPERFAMILY SSF53448 137 285 1.63E-49 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05940 e31882a270fbd92a9f25bc3d079cc543 397 SUPERFAMILY SSF53448 3 83 1.63E-49 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05940 e31882a270fbd92a9f25bc3d079cc543 397 Pfam PF00535 Glycosyl transferase family 2 6 85 4.2E-21 T 10-11-2016 IPR001173 Glycosyltransferase 2-like CJM129_RS05940 e31882a270fbd92a9f25bc3d079cc543 397 Gene3D G3DSA:3.90.550.10 1 84 9.3E-55 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05940 e31882a270fbd92a9f25bc3d079cc543 397 Gene3D G3DSA:3.90.550.10 138 260 9.3E-55 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 PANTHER PTHR30244:SF1 3 181 2.4E-75 T 10-11-2016 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 Pfam PF00700 Bacterial flagellin C-terminal helical region 489 574 8.6E-27 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 SUPERFAMILY SSF64518 443 575 2.48E-95 T 10-11-2016 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 SUPERFAMILY SSF64518 1 382 2.48E-95 T 10-11-2016 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 PANTHER PTHR30244 3 181 2.4E-75 T 10-11-2016 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 PANTHER PTHR30244 398 575 2.4E-75 T 10-11-2016 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 Gene3D G3DSA:1.20.1330.10 477 531 6.3E-43 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 Gene3D G3DSA:1.20.1330.10 54 171 6.3E-43 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 PANTHER PTHR30244:SF1 398 575 2.4E-75 T 10-11-2016 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 PRINTS PR00207 Flagellin signature 37 54 1.6E-20 T 10-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 PRINTS PR00207 Flagellin signature 111 134 1.6E-20 T 10-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 PRINTS PR00207 Flagellin signature 76 95 1.6E-20 T 10-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 Pfam PF07196 Flagellin hook IN motif 187 240 5.3E-11 T 10-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 Pfam PF07196 Flagellin hook IN motif 252 301 1.0E-11 T 10-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 CJM129_RS07180 586db638ce8040ce4c42e7124060f709 575 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.0E-41 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS07955 b92e12a647516725b286c23e30995ce4 172 Pfam PF03448 MgtE intracellular N domain 91 164 1.4E-7 T 10-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain CJM129_RS07955 b92e12a647516725b286c23e30995ce4 172 SUPERFAMILY SSF158791 91 163 4.58E-9 T 10-11-2016 CJM129_RS07955 b92e12a647516725b286c23e30995ce4 172 Gene3D G3DSA:1.25.60.10 70 164 3.0E-6 T 10-11-2016 CJM129_RS02170 c4bda399e9da366fa278e7b68f141b4f 365 Pfam PF13682 Chemoreceptor zinc-binding domain 258 321 8.2E-12 T 10-11-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 CJM129_RS02170 c4bda399e9da366fa278e7b68f141b4f 365 Gene3D G3DSA:1.10.287.950 65 247 5.3E-42 T 10-11-2016 CJM129_RS02170 c4bda399e9da366fa278e7b68f141b4f 365 SUPERFAMILY SSF58104 63 273 2.88E-47 T 10-11-2016 CJM129_RS02170 c4bda399e9da366fa278e7b68f141b4f 365 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 168 197 1.3E-16 T 10-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJM129_RS02170 c4bda399e9da366fa278e7b68f141b4f 365 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 139 166 1.3E-16 T 10-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJM129_RS02170 c4bda399e9da366fa278e7b68f141b4f 365 PANTHER PTHR32089 76 249 3.0E-39 T 10-11-2016 CJM129_RS02170 c4bda399e9da366fa278e7b68f141b4f 365 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 107 240 2.7E-33 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS02170 c4bda399e9da366fa278e7b68f141b4f 365 SMART SM00283 41 304 3.5E-17 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 10-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 PANTHER PTHR11404 1 201 5.8E-89 T 10-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 SUPERFAMILY SSF46609 1 82 3.93E-29 T 10-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 PANTHER PTHR11404:SF8 1 201 5.8E-89 T 10-11-2016 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 98 196 2.3E-35 T 10-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 PRINTS PR01703 Manganese superoxide dismutase signature 26 39 1.6E-15 T 10-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 1.6E-15 T 10-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 1.6E-15 T 10-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 PRINTS PR01703 Manganese superoxide dismutase signature 5 16 1.6E-15 T 10-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 PRINTS PR01703 Manganese superoxide dismutase signature 64 77 1.6E-15 T 10-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 80 1.1E-24 T 10-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 PIRSF PIRSF000349 1 206 2.6E-71 T 10-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 Gene3D G3DSA:1.10.287.990 19 80 4.1E-22 T 10-11-2016 CJM129_RS00855 6f2713dfd39240405828858a739ddf02 220 SUPERFAMILY SSF54719 95 204 5.11E-41 T 10-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 Gene3D G3DSA:1.10.710.10 334 413 3.3E-15 T 10-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 Gene3D G3DSA:1.10.710.10 139 266 3.3E-15 T 10-11-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 Gene3D G3DSA:1.20.140.10 414 560 9.0E-50 T 10-11-2016 CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 PANTHER PTHR30633 189 267 7.3E-71 T 10-11-2016 CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 PANTHER PTHR30633 475 604 7.3E-71 T 10-11-2016 CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 PANTHER PTHR30633 313 459 7.3E-71 T 10-11-2016 CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 PANTHER PTHR30633 1 170 7.3E-71 T 10-11-2016 CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 SUPERFAMILY SSF48695 316 562 2.71E-131 T 10-11-2016 IPR011031 Multihaem cytochrome CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 SUPERFAMILY SSF48695 49 274 2.71E-131 T 10-11-2016 IPR011031 Multihaem cytochrome CJM129_RS07280 f78fd2d8a334d23bd09a35ca309574c6 610 Pfam PF02335 Cytochrome c552 55 591 2.5E-171 T 10-11-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 CJM129_RS05225 994f3944eaf8d6955095e4ea6d5b9c05 235 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 130 217 8.5E-16 T 10-11-2016 IPR032871 AHH domain-containing protein CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 PANTHER PTHR30408 877 1069 2.6E-14 T 10-11-2016 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 SUPERFAMILY SSF53335 840 869 9.2E-68 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 SUPERFAMILY SSF53335 242 695 9.2E-68 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 PANTHER PTHR30408:SF2 877 1069 2.6E-14 T 10-11-2016 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 537 549 7.0E-13 T 10-11-2016 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 414 430 7.0E-13 T 10-11-2016 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 445 459 7.0E-13 T 10-11-2016 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 577 601 7.0E-13 T 10-11-2016 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 Pfam PF02384 N-6 DNA Methylase 395 686 5.2E-27 T 10-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 SUPERFAMILY SSF116734 1117 1277 1.05E-21 T 10-11-2016 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 Gene3D G3DSA:3.40.50.150 416 662 4.3E-36 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 68 125 1.7E-6 T 10-11-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 SUPERFAMILY SSF116734 881 1069 2.45E-41 T 10-11-2016 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 Pfam PF01420 Type I restriction modification DNA specificity domain 1117 1259 4.2E-12 T 10-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 Pfam PF01420 Type I restriction modification DNA specificity domain 898 1045 3.9E-20 T 10-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CJM129_RS05520 7cb8d08e0c6a341629a545531c27ef6e 1279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 540 546 - T 10-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 PANTHER PTHR24198 339 402 8.1E-29 T 10-11-2016 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 PANTHER PTHR24198 213 311 8.1E-29 T 10-11-2016 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 PANTHER PTHR24198 89 98 8.1E-29 T 10-11-2016 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 Gene3D G3DSA:1.25.40.20 224 402 1.1E-29 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 SMART SM00248 250 277 680.0 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 SMART SM00248 281 310 7.9E-7 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 SMART SM00248 219 249 390.0 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 SMART SM00248 341 370 1.8E-4 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 SMART SM00248 374 403 920.0 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 Pfam PF12796 Ankyrin repeats (3 copies) 225 311 1.1E-12 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 SUPERFAMILY SSF48403 205 399 1.03E-29 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 PRINTS PR01415 Ankyrin repeat signature 282 297 6.5E-5 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 PRINTS PR01415 Ankyrin repeat signature 357 371 6.5E-5 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS04030 62120fb51ce26f28a69756a14a72bc4e 412 Pfam PF13637 Ankyrin repeats (many copies) 345 389 3.1E-8 T 10-11-2016 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 Gene3D G3DSA:2.40.50.140 2 107 2.9E-34 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 553 8.9E-110 T 10-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 PANTHER PTHR22594 2 298 3.3E-242 T 10-11-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 5.9E-26 T 10-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 5.9E-26 T 10-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 5.9E-26 T 10-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 5.9E-26 T 10-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 SUPERFAMILY SSF50249 1 106 4.19E-31 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.2E-16 T 10-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 PANTHER PTHR22594 369 566 3.3E-242 T 10-11-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 558 35.42 T 10-11-2016 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 SUPERFAMILY SSF55261 290 419 1.66E-36 T 10-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 PANTHER PTHR22594:SF5 2 298 3.3E-242 T 10-11-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 PANTHER PTHR22594:SF5 369 566 3.3E-242 T 10-11-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 SUPERFAMILY SSF55681 424 580 4.4E-103 T 10-11-2016 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 SUPERFAMILY SSF55681 112 293 4.4E-103 T 10-11-2016 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 Gene3D G3DSA:3.30.930.10 133 277 1.3E-113 T 10-11-2016 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 Gene3D G3DSA:3.30.930.10 415 580 1.3E-113 T 10-11-2016 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 577 5.8E-242 T 10-11-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 Pfam PF02938 GAD domain 313 405 2.6E-25 T 10-11-2016 IPR029351 GAD domain CJM129_RS03095 183245ded7aaf8f12efbf2fd9c9439c7 583 Gene3D G3DSA:3.30.1360.30 278 414 2.4E-45 T 10-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 CJM129_RS06560 07151a2d50ae9fd0a1c34eced6386a0a 411 SMART SM00388 207 262 0.0074 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS06560 07151a2d50ae9fd0a1c34eced6386a0a 411 SUPERFAMILY SSF55874 272 401 4.98E-18 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06560 07151a2d50ae9fd0a1c34eced6386a0a 411 PANTHER PTHR24423 149 388 8.7E-20 T 10-11-2016 CJM129_RS06560 07151a2d50ae9fd0a1c34eced6386a0a 411 SMART SM00387 308 410 1.0E-6 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06560 07151a2d50ae9fd0a1c34eced6386a0a 411 Gene3D G3DSA:1.10.287.130 199 257 2.0E-8 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS06560 07151a2d50ae9fd0a1c34eced6386a0a 411 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 391 3.0E-6 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06560 07151a2d50ae9fd0a1c34eced6386a0a 411 SUPERFAMILY SSF47384 191 256 1.18E-6 T 10-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJM129_RS06560 07151a2d50ae9fd0a1c34eced6386a0a 411 Gene3D G3DSA:3.30.565.10 268 392 5.1E-12 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS06560 07151a2d50ae9fd0a1c34eced6386a0a 411 Pfam PF00672 HAMP domain 136 197 1.6E-6 T 10-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJM129_RS01950 4848d7b87b568b475a9c0a016d3cdc09 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 268 18.304 T 10-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CJM129_RS01950 4848d7b87b568b475a9c0a016d3cdc09 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 264 5.9E-65 T 10-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CJM129_RS01950 4848d7b87b568b475a9c0a016d3cdc09 271 PANTHER PTHR30589 2 262 2.4E-66 T 10-11-2016 CJM129_RS01950 4848d7b87b568b475a9c0a016d3cdc09 271 PANTHER PTHR30589:SF0 2 262 2.4E-66 T 10-11-2016 CJM129_RS01950 4848d7b87b568b475a9c0a016d3cdc09 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 262 8.2E-66 T 10-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CJM129_RS01950 4848d7b87b568b475a9c0a016d3cdc09 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 151 163 - T 10-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 CJM129_RS06470 5e8e5e759082a1076e4eebc93ebb8b92 340 Gene3D G3DSA:3.20.20.210 3 338 5.8E-131 T 10-11-2016 CJM129_RS06470 5e8e5e759082a1076e4eebc93ebb8b92 340 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 16 25 - T 10-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CJM129_RS06470 5e8e5e759082a1076e4eebc93ebb8b92 340 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 338 47.288 T 10-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CJM129_RS06470 5e8e5e759082a1076e4eebc93ebb8b92 340 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 3 336 8.5E-130 T 10-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CJM129_RS06470 5e8e5e759082a1076e4eebc93ebb8b92 340 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 336 2.8E-116 T 10-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CJM129_RS06470 5e8e5e759082a1076e4eebc93ebb8b92 340 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 136 152 - T 10-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 CJM129_RS06470 5e8e5e759082a1076e4eebc93ebb8b92 340 PANTHER PTHR21091 11 340 1.4E-130 T 10-11-2016 CJM129_RS06470 5e8e5e759082a1076e4eebc93ebb8b92 340 PANTHER PTHR21091:SF2 11 340 1.4E-130 T 10-11-2016 CJM129_RS06470 5e8e5e759082a1076e4eebc93ebb8b92 340 SUPERFAMILY SSF51726 3 338 5.41E-106 T 10-11-2016 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 SMART SM00962 83 284 1.6E-101 T 10-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 25 284 53.605 T 10-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 Gene3D G3DSA:3.40.50.300 94 284 9.7E-74 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 PANTHER PTHR11564 1 283 2.2E-101 T 10-11-2016 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 257 270 - T 10-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 SMART SM00382 82 265 1.0E-4 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 30 283 7.7E-93 T 10-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 PANTHER PTHR11564:SF16 1 283 2.2E-101 T 10-11-2016 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 SUPERFAMILY SSF47364 1 51 1.96E-6 T 10-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 Gene3D G3DSA:1.20.120.140 30 93 5.0E-16 T 10-11-2016 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 Pfam PF00448 SRP54-type protein, GTPase domain 84 283 2.2E-73 T 10-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS06280 939610ec1f352815329fa99607e36fb6 288 SUPERFAMILY SSF52540 80 283 1.37E-47 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 PANTHER PTHR32479:SF10 1 476 3.5E-133 T 10-11-2016 CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 70 292 1.1E-51 T 10-11-2016 IPR003741 LUD domain CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 Pfam PF13183 4Fe-4S dicluster domain 309 376 2.3E-11 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 SUPERFAMILY SSF100950 62 86 1.38E-37 T 10-11-2016 CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 SUPERFAMILY SSF100950 133 294 1.38E-37 T 10-11-2016 CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 362 373 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 15 460 6.1E-168 T 10-11-2016 IPR004452 4Fe-4S binding protein GO:0019516 CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 Pfam PF11870 Domain of unknown function (DUF3390) 384 475 4.5E-16 T 10-11-2016 IPR024569 4Fe-4S binding protein, C-terminal CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 Gene3D G3DSA:1.10.1060.10 302 390 7.7E-13 T 10-11-2016 CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 SUPERFAMILY SSF46548 265 387 7.85E-19 T 10-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 Gene3D G3DSA:3.40.50.10420 188 294 3.0E-44 T 10-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 Gene3D G3DSA:3.40.50.10420 63 126 3.0E-44 T 10-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CJM129_RS00385 671cedf128cff8994c32cf5d5fd503e2 479 PANTHER PTHR32479 1 476 3.5E-133 T 10-11-2016 CJM129_RS02855 4ec72abc9fffd31d70d3b1288ca3d1df 235 Pfam PF13649 Methyltransferase domain 56 150 1.6E-13 T 10-11-2016 CJM129_RS02855 4ec72abc9fffd31d70d3b1288ca3d1df 235 SUPERFAMILY SSF53335 15 234 8.74E-38 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS02855 4ec72abc9fffd31d70d3b1288ca3d1df 235 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 2 234 2.9E-69 T 10-11-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 CJM129_RS02855 4ec72abc9fffd31d70d3b1288ca3d1df 235 Gene3D G3DSA:3.40.50.150 15 234 8.5E-55 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS02855 4ec72abc9fffd31d70d3b1288ca3d1df 235 PANTHER PTHR10108:SF809 1 227 2.7E-29 T 10-11-2016 CJM129_RS02855 4ec72abc9fffd31d70d3b1288ca3d1df 235 PIRSF PIRSF006325 1 235 1.9E-102 T 10-11-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 CJM129_RS02855 4ec72abc9fffd31d70d3b1288ca3d1df 235 PANTHER PTHR10108 1 227 2.7E-29 T 10-11-2016 CJM129_RS02855 4ec72abc9fffd31d70d3b1288ca3d1df 235 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 1 234 36.555 T 10-11-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 CJM129_RS03435 fd20d3537f17483828d5e5d7e0e7cd01 80 SUPERFAMILY SSF54814 9 63 6.1E-5 T 10-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CJM129_RS03435 fd20d3537f17483828d5e5d7e0e7cd01 80 Gene3D G3DSA:3.30.300.120 24 76 1.6E-6 T 10-11-2016 CJM129_RS03435 fd20d3537f17483828d5e5d7e0e7cd01 80 Pfam PF13083 KH domain 3 76 4.8E-18 T 10-11-2016 CJM129_RS00835 e1c3a9c98ed0bba40d4263704615ca6c 289 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 282 20.507 T 10-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CJM129_RS00835 e1c3a9c98ed0bba40d4263704615ca6c 289 PANTHER PTHR11088:SF25 5 262 7.2E-48 T 10-11-2016 CJM129_RS00835 e1c3a9c98ed0bba40d4263704615ca6c 289 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 268 3.8E-66 T 10-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CJM129_RS00835 e1c3a9c98ed0bba40d4263704615ca6c 289 PANTHER PTHR11088 5 262 7.2E-48 T 10-11-2016 CJM129_RS00835 e1c3a9c98ed0bba40d4263704615ca6c 289 SUPERFAMILY SSF52540 5 109 4.68E-11 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00835 e1c3a9c98ed0bba40d4263704615ca6c 289 SUPERFAMILY SSF52540 165 227 4.68E-11 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00835 e1c3a9c98ed0bba40d4263704615ca6c 289 Pfam PF01715 IPP transferase 38 266 6.4E-48 T 10-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 CJM129_RS00835 e1c3a9c98ed0bba40d4263704615ca6c 289 Gene3D G3DSA:1.10.287.890 188 266 2.6E-21 T 10-11-2016 CJM129_RS00835 e1c3a9c98ed0bba40d4263704615ca6c 289 Gene3D G3DSA:3.40.50.300 5 158 2.1E-30 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05685 14339a9ae02246a089df4d327e6ac264 253 PANTHER PTHR13779:SF28 185 244 1.6E-69 T 10-11-2016 CJM129_RS05685 14339a9ae02246a089df4d327e6ac264 253 PANTHER PTHR13779:SF28 12 158 1.6E-69 T 10-11-2016 CJM129_RS05685 14339a9ae02246a089df4d327e6ac264 253 Pfam PF05673 Protein of unknown function (DUF815) 6 247 3.3E-90 T 10-11-2016 IPR008533 Domain of unknown function DUF815 CJM129_RS05685 14339a9ae02246a089df4d327e6ac264 253 PANTHER PTHR13779 12 158 1.6E-69 T 10-11-2016 CJM129_RS05685 14339a9ae02246a089df4d327e6ac264 253 PANTHER PTHR13779 185 244 1.6E-69 T 10-11-2016 CJM129_RS05685 14339a9ae02246a089df4d327e6ac264 253 Gene3D G3DSA:3.40.50.300 26 165 5.5E-19 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05685 14339a9ae02246a089df4d327e6ac264 253 SUPERFAMILY SSF52540 15 163 3.23E-25 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 246 261 - T 10-11-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 PANTHER PTHR30031:SF0 11 524 0.0 T 10-11-2016 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 8 522 56.598 T 10-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 Gene3D G3DSA:3.40.449.10 14 207 2.2E-80 T 10-11-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 SUPERFAMILY SSF53795 210 523 2.29E-133 T 10-11-2016 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 SUPERFAMILY SSF68923 4 208 1.36E-80 T 10-11-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 PIRSF PIRSF006294 1 524 1.0E-244 T 10-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 Pfam PF01293 Phosphoenolpyruvate carboxykinase 14 475 8.7E-221 T 10-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 Gene3D G3DSA:3.90.228.20 210 271 1.9E-122 T 10-11-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 Gene3D G3DSA:3.90.228.20 331 512 1.9E-122 T 10-11-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 3 523 2.5E-233 T 10-11-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 CJM129_RS04495 778d28c8dbabb0032d8dc986a0ee8a10 524 PANTHER PTHR30031 11 524 0.0 T 10-11-2016 CJM129_RS02315 d67ab48ac525e89e432b2fc3e9639cd3 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 3.3E-13 T 10-11-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 CJM129_RS02315 d67ab48ac525e89e432b2fc3e9639cd3 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 11.903 T 10-11-2016 IPR022943 Preprotein translocase subunit SecE CJM129_RS02315 d67ab48ac525e89e432b2fc3e9639cd3 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 59 5.2E-16 T 10-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CJM129_RS02315 d67ab48ac525e89e432b2fc3e9639cd3 59 Gene3D G3DSA:1.20.5.1030 1 58 2.0E-17 T 10-11-2016 CJM129_RS01605 333a3ece2a0e4dffe7dfa9def74f8e39 258 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 10-11-2016 IPR000540 Flagellar motor protein MotA, conserved site CJM129_RS01605 333a3ece2a0e4dffe7dfa9def74f8e39 258 PANTHER PTHR30433 2 249 2.5E-63 T 10-11-2016 CJM129_RS01605 333a3ece2a0e4dffe7dfa9def74f8e39 258 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 215 2.5E-17 T 10-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CJM129_RS01605 333a3ece2a0e4dffe7dfa9def74f8e39 258 PANTHER PTHR30433:SF3 2 249 2.5E-63 T 10-11-2016 IPR022522 Flagellar motor stator, MotA CJM129_RS02185 2a0eb916b78b006b8c2d6dcee3ab528d 215 PANTHER PTHR11749 1 212 2.6E-99 T 10-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CJM129_RS02185 2a0eb916b78b006b8c2d6dcee3ab528d 215 SUPERFAMILY SSF51366 2 212 6.26E-68 T 10-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJM129_RS02185 2a0eb916b78b006b8c2d6dcee3ab528d 215 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 10-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CJM129_RS02185 2a0eb916b78b006b8c2d6dcee3ab528d 215 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 212 2.7E-95 T 10-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CJM129_RS02185 2a0eb916b78b006b8c2d6dcee3ab528d 215 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 10-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CJM129_RS02185 2a0eb916b78b006b8c2d6dcee3ab528d 215 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 3.7E-79 T 10-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CJM129_RS02185 2a0eb916b78b006b8c2d6dcee3ab528d 215 PIRSF PIRSF001461 1 215 1.1E-88 T 10-11-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CJM129_RS02185 2a0eb916b78b006b8c2d6dcee3ab528d 215 Gene3D G3DSA:3.20.20.70 2 212 2.9E-83 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS05550 bf5eebe2d4909c2cec0eef2a0cfa2a1a 57 Gene3D G3DSA:1.10.287.1040 1 57 9.2E-10 T 10-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CJM129_RS05550 bf5eebe2d4909c2cec0eef2a0cfa2a1a 57 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 2 57 6.0E-13 T 10-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CJM129_RS05550 bf5eebe2d4909c2cec0eef2a0cfa2a1a 57 Pfam PF02609 Exonuclease VII small subunit 3 54 7.4E-11 T 10-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CJM129_RS05550 bf5eebe2d4909c2cec0eef2a0cfa2a1a 57 SUPERFAMILY SSF116842 1 56 1.7E-10 T 10-11-2016 CJM129_RS03505 79dbaa613d7b1cbc72a1760aa5f607ba 180 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 1.3E-36 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS03505 79dbaa613d7b1cbc72a1760aa5f607ba 180 SUPERFAMILY SSF53218 3 175 2.49E-45 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS03505 79dbaa613d7b1cbc72a1760aa5f607ba 180 Gene3D G3DSA:3.40.980.10 3 164 1.9E-52 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS03505 79dbaa613d7b1cbc72a1760aa5f607ba 180 Pfam PF00994 Probable molybdopterin binding domain 7 151 1.3E-29 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS03505 79dbaa613d7b1cbc72a1760aa5f607ba 180 PANTHER PTHR10192 1 175 6.1E-81 T 10-11-2016 CJM129_RS03505 79dbaa613d7b1cbc72a1760aa5f607ba 180 SMART SM00852 7 153 2.1E-27 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS07585 8b25b2044661ae0f335b640a6ab15682 257 Gene3D G3DSA:3.40.50.150 23 256 7.4E-25 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07585 8b25b2044661ae0f335b640a6ab15682 257 ProSitePatterns PS00213 Lipocalin signature. 203 214 - T 10-11-2016 IPR022272 Lipocalin family conserved site CJM129_RS07585 8b25b2044661ae0f335b640a6ab15682 257 SUPERFAMILY SSF53335 5 237 6.88E-35 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07585 8b25b2044661ae0f335b640a6ab15682 257 PANTHER PTHR10108:SF730 17 243 3.5E-22 T 10-11-2016 CJM129_RS07585 8b25b2044661ae0f335b640a6ab15682 257 PANTHER PTHR10108 17 243 3.5E-22 T 10-11-2016 CJM129_RS07585 8b25b2044661ae0f335b640a6ab15682 257 Pfam PF08241 Methyltransferase domain 45 136 9.6E-12 T 10-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CJM129_RS02875 8a30cb278202636a975b98ad3c9761e0 216 SMART SM00477 41 215 6.1E-11 T 10-11-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 CJM129_RS02875 8a30cb278202636a975b98ad3c9761e0 216 Gene3D G3DSA:3.40.570.10 32 215 9.9E-43 T 10-11-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 CJM129_RS02875 8a30cb278202636a975b98ad3c9761e0 216 PANTHER PTHR13966 33 214 2.0E-27 T 10-11-2016 CJM129_RS02875 8a30cb278202636a975b98ad3c9761e0 216 Pfam PF01223 DNA/RNA non-specific endonuclease 34 215 5.6E-32 T 10-11-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CJM129_RS02875 8a30cb278202636a975b98ad3c9761e0 216 SMART SM00892 40 216 6.0E-25 T 10-11-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 CJM129_RS02875 8a30cb278202636a975b98ad3c9761e0 216 SUPERFAMILY SSF54060 33 215 1.65E-48 T 10-11-2016 CJM129_RS00750 0b27498eb13483c8088e13fd83eaa7a7 112 PANTHER PTHR34039:SF1 1 99 6.1E-22 T 10-11-2016 CJM129_RS00750 0b27498eb13483c8088e13fd83eaa7a7 112 PANTHER PTHR34039 1 99 6.1E-22 T 10-11-2016 CJM129_RS00750 0b27498eb13483c8088e13fd83eaa7a7 112 SUPERFAMILY SSF52980 12 107 6.03E-25 T 10-11-2016 IPR011335 Restriction endonuclease type II-like CJM129_RS00750 0b27498eb13483c8088e13fd83eaa7a7 112 Pfam PF02021 Uncharacterised protein family UPF0102 12 99 2.7E-21 T 10-11-2016 IPR003509 Uncharacterised protein family UPF0102 CJM129_RS00750 0b27498eb13483c8088e13fd83eaa7a7 112 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 112 18.068 T 10-11-2016 IPR003509 Uncharacterised protein family UPF0102 CJM129_RS00750 0b27498eb13483c8088e13fd83eaa7a7 112 Gene3D G3DSA:3.40.1350.10 11 110 2.6E-25 T 10-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 565 3.0E-218 T 10-11-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 Pfam PF04073 Aminoacyl-tRNA editing domain 258 371 5.3E-17 T 10-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 Pfam PF03129 Anticodon binding domain 478 565 2.5E-15 T 10-11-2016 IPR004154 Anticodon-binding CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 SUPERFAMILY SSF52954 462 566 4.38E-24 T 10-11-2016 IPR004154 Anticodon-binding CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 Gene3D G3DSA:3.90.960.10 250 390 1.0E-17 T 10-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 SUPERFAMILY SSF55681 406 473 7.73E-96 T 10-11-2016 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 SUPERFAMILY SSF55681 11 237 7.73E-96 T 10-11-2016 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 Gene3D G3DSA:3.30.930.10 391 471 1.3E-99 T 10-11-2016 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 Gene3D G3DSA:3.30.930.10 11 234 1.3E-99 T 10-11-2016 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 9.2E-49 T 10-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 SUPERFAMILY SSF55826 218 371 1.83E-17 T 10-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 Gene3D G3DSA:3.40.50.800 472 566 1.4E-20 T 10-11-2016 IPR004154 Anticodon-binding CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-14 T 10-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-14 T 10-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-14 T 10-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-14 T 10-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 568 37.534 T 10-11-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 PANTHER PTHR11451:SF3 4 244 1.1E-137 T 10-11-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 PANTHER PTHR11451:SF3 397 567 1.1E-137 T 10-11-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 PANTHER PTHR11451 4 244 1.1E-137 T 10-11-2016 CJM129_RS02600 dbcfde4c80a8cd5378f3a185dc7e33b8 568 PANTHER PTHR11451 397 567 1.1E-137 T 10-11-2016 CJM129_RS00870 ae309b96521b1d4d5026de295db9e0b1 401 PANTHER PTHR12286 1 401 2.6E-152 T 10-11-2016 CJM129_RS00870 ae309b96521b1d4d5026de295db9e0b1 401 PANTHER PTHR12286:SF6 1 401 2.6E-152 T 10-11-2016 CJM129_RS00870 ae309b96521b1d4d5026de295db9e0b1 401 SUPERFAMILY SSF51735 1 189 8.25E-15 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00870 ae309b96521b1d4d5026de295db9e0b1 401 Gene3D G3DSA:3.40.50.720 1 190 1.1E-26 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00870 ae309b96521b1d4d5026de295db9e0b1 401 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 141 388 9.8E-37 T 10-11-2016 IPR032095 Saccharopine dehydrogenase, C-terminal CJM129_RS00870 ae309b96521b1d4d5026de295db9e0b1 401 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 135 3.9E-30 T 10-11-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 Gene3D G3DSA:3.40.50.1260 6 181 3.3E-69 T 10-11-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 Pfam PF00162 Phosphoglycerate kinase 7 386 3.7E-150 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 6.2E-84 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PRINTS PR00477 Phosphoglycerate kinase family signature 372 389 6.2E-84 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PRINTS PR00477 Phosphoglycerate kinase family signature 11 27 6.2E-84 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 6.2E-84 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PRINTS PR00477 Phosphoglycerate kinase family signature 194 213 6.2E-84 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 6.2E-84 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 6.2E-84 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PRINTS PR00477 Phosphoglycerate kinase family signature 171 193 6.2E-84 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PRINTS PR00477 Phosphoglycerate kinase family signature 349 360 6.2E-84 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 SUPERFAMILY SSF53748 5 395 1.65E-145 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PIRSF PIRSF000724 1 400 1.0E-149 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 PANTHER PTHR11406 1 394 1.2E-202 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 Gene3D G3DSA:3.40.50.1270 184 384 5.2E-80 T 10-11-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 16 26 - T 10-11-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS07495 f846e4a76eef784ce7123e5236ee3ad2 400 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 396 39.515 T 10-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 Gene3D G3DSA:3.30.1360.70 2 93 1.8E-24 T 10-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 2 77 1.8E-16 T 10-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 SMART SM00836 414 528 1.4E-27 T 10-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 528 9.7E-135 T 10-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 SUPERFAMILY SSF55190 2 89 7.32E-20 T 10-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 SMART SM01016 3 77 7.9E-22 T 10-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 SUPERFAMILY SSF52374 101 424 1.88E-83 T 10-11-2016 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 528 23.041 T 10-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 Pfam PF00750 tRNA synthetases class I (R) 88 385 2.2E-20 T 10-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 Pfam PF05746 DALR anticodon binding domain 414 528 3.3E-24 T 10-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 Gene3D G3DSA:3.40.50.620 101 419 6.5E-89 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 115 124 - T 10-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 PANTHER PTHR11956 1 528 2.2E-151 T 10-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 Gene3D G3DSA:1.10.730.10 420 528 3.4E-25 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 PANTHER PTHR11956:SF6 1 528 2.2E-151 T 10-11-2016 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 PRINTS PR01038 Arginyl-tRNA synthetase signature 283 304 3.6E-21 T 10-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 PRINTS PR01038 Arginyl-tRNA synthetase signature 144 157 3.6E-21 T 10-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 PRINTS PR01038 Arginyl-tRNA synthetase signature 105 120 3.6E-21 T 10-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 136 3.6E-21 T 10-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 CJM129_RS06125 efd4d9896f7f53d2ba07ec3deee72dd1 530 SUPERFAMILY SSF47323 408 528 2.42E-23 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS02265 720ad94b6a510b44e79338d9305bcfb8 233 SUPERFAMILY SSF161098 11 219 2.88E-38 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02265 720ad94b6a510b44e79338d9305bcfb8 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 5.7E-14 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02265 720ad94b6a510b44e79338d9305bcfb8 233 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 86 7.5E-22 T 10-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CJM129_RS02265 720ad94b6a510b44e79338d9305bcfb8 233 PANTHER PTHR30614 1 231 6.5E-58 T 10-11-2016 CJM129_RS02265 720ad94b6a510b44e79338d9305bcfb8 233 Gene3D G3DSA:1.10.3720.10 8 230 4.9E-40 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS00920 a644cc3d95f89f62437dda492f625e1e 399 PANTHER PTHR11384 122 225 2.7E-36 T 10-11-2016 CJM129_RS00920 a644cc3d95f89f62437dda492f625e1e 399 PANTHER PTHR11384:SF3 241 395 2.7E-36 T 10-11-2016 CJM129_RS00920 a644cc3d95f89f62437dda492f625e1e 399 Pfam PF05992 SbmA/BacA-like family 9 50 1.7E-9 T 10-11-2016 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 CJM129_RS00920 a644cc3d95f89f62437dda492f625e1e 399 Pfam PF05992 SbmA/BacA-like family 110 395 1.6E-100 T 10-11-2016 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 CJM129_RS00920 a644cc3d95f89f62437dda492f625e1e 399 PANTHER PTHR11384 241 395 2.7E-36 T 10-11-2016 CJM129_RS00920 a644cc3d95f89f62437dda492f625e1e 399 PANTHER PTHR11384:SF3 122 225 2.7E-36 T 10-11-2016 CJM129_RS00920 a644cc3d95f89f62437dda492f625e1e 399 SUPERFAMILY SSF90123 96 391 3.45E-9 T 10-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJM129_RS06765 9d378219ef26c47bbd6f3f9f14cbf938 326 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 33 235 1.2E-23 T 10-11-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS06765 9d378219ef26c47bbd6f3f9f14cbf938 326 SMART SM00479 33 199 5.1E-31 T 10-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CJM129_RS06765 9d378219ef26c47bbd6f3f9f14cbf938 326 Pfam PF00929 Exonuclease 35 186 1.2E-29 T 10-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III CJM129_RS06765 9d378219ef26c47bbd6f3f9f14cbf938 326 SUPERFAMILY SSF53098 31 215 4.0E-44 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS06765 9d378219ef26c47bbd6f3f9f14cbf938 326 SUPERFAMILY SSF52113 238 325 3.92E-10 T 10-11-2016 IPR001357 BRCT domain CJM129_RS06765 9d378219ef26c47bbd6f3f9f14cbf938 326 Gene3D G3DSA:3.40.50.10190 237 325 2.2E-15 T 10-11-2016 IPR001357 BRCT domain CJM129_RS06765 9d378219ef26c47bbd6f3f9f14cbf938 326 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 237 296 1.3E-7 T 10-11-2016 IPR001357 BRCT domain CJM129_RS06765 9d378219ef26c47bbd6f3f9f14cbf938 326 PANTHER PTHR30231 1 186 1.4E-35 T 10-11-2016 CJM129_RS06765 9d378219ef26c47bbd6f3f9f14cbf938 326 Gene3D G3DSA:3.30.420.10 30 198 1.3E-44 T 10-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 500 514 2.3E-19 T 10-11-2016 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 749 761 2.3E-19 T 10-11-2016 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 829 853 2.3E-19 T 10-11-2016 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 469 485 2.3E-19 T 10-11-2016 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 SUPERFAMILY SSF53335 257 406 1.06E-52 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 SUPERFAMILY SSF53335 817 951 1.06E-52 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 SUPERFAMILY SSF53335 460 524 1.06E-52 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 SUPERFAMILY SSF53335 744 767 1.06E-52 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 SUPERFAMILY SSF53335 560 614 1.06E-52 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PANTHER PTHR33841:SF2 143 415 2.3E-62 T 10-11-2016 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PANTHER PTHR33841:SF2 824 966 2.3E-62 T 10-11-2016 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PANTHER PTHR33841:SF2 464 784 2.3E-62 T 10-11-2016 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 Gene3D G3DSA:3.40.50.150 568 612 1.1E-41 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 Gene3D G3DSA:3.40.50.150 471 520 1.1E-41 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 Gene3D G3DSA:3.40.50.150 809 933 1.1E-41 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 Gene3D G3DSA:3.40.50.150 742 765 1.1E-41 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 752 758 - T 10-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 Pfam PF07669 Eco57I restriction-modification methylase 749 892 1.0E-5 T 10-11-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PANTHER PTHR33841 824 966 2.3E-62 T 10-11-2016 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PANTHER PTHR33841 464 784 2.3E-62 T 10-11-2016 CJM129_RS03330 03917d1ba2cbffaa37949853930671d1 1250 PANTHER PTHR33841 143 415 2.3E-62 T 10-11-2016 CJM129_RS08690 e8f5fd45f93416c7278eb7259575e115 103 Pfam PF02575 YbaB/EbfC DNA-binding family 14 98 5.1E-21 T 10-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJM129_RS08690 e8f5fd45f93416c7278eb7259575e115 103 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 97 17.948 T 10-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJM129_RS08690 e8f5fd45f93416c7278eb7259575e115 103 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 5 101 7.7E-23 T 10-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJM129_RS08690 e8f5fd45f93416c7278eb7259575e115 103 SUPERFAMILY SSF82607 7 97 8.63E-21 T 10-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJM129_RS08690 e8f5fd45f93416c7278eb7259575e115 103 PIRSF PIRSF004555 3 103 1.6E-25 T 10-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJM129_RS08690 e8f5fd45f93416c7278eb7259575e115 103 Gene3D G3DSA:3.30.1310.10 4 99 1.3E-32 T 10-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJM129_RS08690 e8f5fd45f93416c7278eb7259575e115 103 PANTHER PTHR33449 16 99 1.7E-16 T 10-11-2016 CJM129_RS07770 a474e589254d9073f985284712c89f43 273 Gene3D G3DSA:3.90.650.10 131 263 4.9E-22 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS07770 a474e589254d9073f985284712c89f43 273 Pfam PF00586 AIR synthase related protein, N-terminal domain 18 122 2.1E-14 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS07770 a474e589254d9073f985284712c89f43 273 PANTHER PTHR30270 17 263 1.0E-53 T 10-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 CJM129_RS07770 a474e589254d9073f985284712c89f43 273 SUPERFAMILY SSF55326 7 122 1.45E-23 T 10-11-2016 CJM129_RS07770 a474e589254d9073f985284712c89f43 273 Gene3D G3DSA:3.30.1330.10 9 127 2.4E-27 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS07770 a474e589254d9073f985284712c89f43 273 PANTHER PTHR30270:SF0 17 263 1.0E-53 T 10-11-2016 CJM129_RS07770 a474e589254d9073f985284712c89f43 273 SUPERFAMILY SSF56042 129 263 6.98E-17 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS07185 3b1528eda299e9fde7f4184ba4ccada9 605 Pfam PF01973 Protein of unknown function DUF115 204 374 1.4E-43 T 10-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CJM129_RS07185 3b1528eda299e9fde7f4184ba4ccada9 605 Gene3D G3DSA:3.90.1480.10 231 467 1.2E-10 T 10-11-2016 CJM129_RS07185 3b1528eda299e9fde7f4184ba4ccada9 605 PANTHER PTHR41786:SF1 34 605 7.5E-14 T 10-11-2016 CJM129_RS07185 3b1528eda299e9fde7f4184ba4ccada9 605 PANTHER PTHR41786 34 605 7.5E-14 T 10-11-2016 CJM129_RS08420 345df14849dffd6a177c8db6e1305f81 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 4.1E-53 T 10-11-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08420 345df14849dffd6a177c8db6e1305f81 121 Pfam PF00416 Ribosomal protein S13/S18 3 109 3.1E-31 T 10-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08420 345df14849dffd6a177c8db6e1305f81 121 Gene3D G3DSA:1.10.8.50 1 71 1.4E-30 T 10-11-2016 CJM129_RS08420 345df14849dffd6a177c8db6e1305f81 121 Gene3D G3DSA:4.10.910.10 73 120 1.1E-24 T 10-11-2016 IPR027437 30s ribosomal protein S13, C-terminal CJM129_RS08420 345df14849dffd6a177c8db6e1305f81 121 PANTHER PTHR10871 1 120 3.7E-64 T 10-11-2016 CJM129_RS08420 345df14849dffd6a177c8db6e1305f81 121 SUPERFAMILY SSF46946 2 120 1.65E-44 T 10-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CJM129_RS08420 345df14849dffd6a177c8db6e1305f81 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 27.815 T 10-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08420 345df14849dffd6a177c8db6e1305f81 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 10-11-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJM129_RS08420 345df14849dffd6a177c8db6e1305f81 121 PIRSF PIRSF002134 1 121 4.6E-42 T 10-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 Pfam PF02743 Cache domain 37 313 1.8E-18 T 10-11-2016 IPR033479 Double Cache domain 1 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 PANTHER PTHR32089:SF1 511 693 7.4E-51 T 10-11-2016 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 Gene3D G3DSA:1.10.287.950 508 691 3.6E-45 T 10-11-2016 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 Gene3D G3DSA:3.30.450.20 207 327 4.4E-16 T 10-11-2016 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 PANTHER PTHR32089:SF1 5 412 7.4E-51 T 10-11-2016 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 SMART SM00283 508 699 3.0E-30 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 PANTHER PTHR32089 5 412 7.4E-51 T 10-11-2016 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 PANTHER PTHR32089 511 693 7.4E-51 T 10-11-2016 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 Gene3D G3DSA:3.30.450.20 105 206 1.2E-4 T 10-11-2016 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 SUPERFAMILY SSF58104 382 411 5.89E-49 T 10-11-2016 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 SUPERFAMILY SSF58104 500 698 5.89E-49 T 10-11-2016 CJM129_RS08005 22033d4594ec6e8b1cae2221c5e3e292 700 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 555 691 4.4E-35 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS03085 5e256dead3ea3234122f1b22a2a20b29 172 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 13 172 35.099 T 10-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CJM129_RS03085 5e256dead3ea3234122f1b22a2a20b29 172 Gene3D G3DSA:3.90.80.10 6 172 5.1E-58 T 10-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CJM129_RS03085 5e256dead3ea3234122f1b22a2a20b29 172 PANTHER PTHR10286:SF15 12 172 1.6E-64 T 10-11-2016 CJM129_RS03085 5e256dead3ea3234122f1b22a2a20b29 172 Pfam PF00719 Inorganic pyrophosphatase 17 172 3.6E-53 T 10-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CJM129_RS03085 5e256dead3ea3234122f1b22a2a20b29 172 PANTHER PTHR10286 12 172 1.6E-64 T 10-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CJM129_RS03085 5e256dead3ea3234122f1b22a2a20b29 172 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 64 70 - T 10-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CJM129_RS03085 5e256dead3ea3234122f1b22a2a20b29 172 SUPERFAMILY SSF50324 9 172 4.06E-63 T 10-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 CJM129_RS03035 769b72eec8058a67cd0a8100028c2b28 114 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 1.6E-26 T 10-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CJM129_RS03035 769b72eec8058a67cd0a8100028c2b28 114 PIRSF PIRSF004761 1 114 1.0E-33 T 10-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CJM129_RS03035 769b72eec8058a67cd0a8100028c2b28 114 PANTHER PTHR34535:SF3 2 113 1.7E-27 T 10-11-2016 CJM129_RS03035 769b72eec8058a67cd0a8100028c2b28 114 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 77 - T 10-11-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CJM129_RS03035 769b72eec8058a67cd0a8100028c2b28 114 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 4.5E-27 T 10-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CJM129_RS03035 769b72eec8058a67cd0a8100028c2b28 114 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 24.644 T 10-11-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CJM129_RS03035 769b72eec8058a67cd0a8100028c2b28 114 PANTHER PTHR34535 2 113 1.7E-27 T 10-11-2016 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 ProSitePatterns PS00177 DNA topoisomerase II signature. 418 426 - T 10-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 SUPERFAMILY SSF56719 695 764 8.37E-86 T 10-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 SUPERFAMILY SSF56719 390 555 8.37E-86 T 10-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 9.5E-23 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 Gene3D G3DSA:3.30.230.10 218 388 3.2E-65 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 SMART SM00433 34 762 7.8E-288 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 238 256 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 308 324 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 356 370 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 466 475 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 194 207 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 738 754 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 370 390 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 722 734 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR01159 DNA gyrase subunit B signature 179 194 1.4E-64 T 10-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 SMART SM00387 30 174 1.4E-26 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 Gene3D G3DSA:3.40.50.670 683 751 2.4E-95 T 10-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 Gene3D G3DSA:3.40.50.670 400 545 2.4E-95 T 10-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 769 96.016 T 10-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 SUPERFAMILY SSF55874 5 216 1.1E-72 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 Gene3D G3DSA:3.30.565.10 5 216 4.0E-91 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PANTHER PTHR10169 1 548 3.7E-280 T 10-11-2016 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PANTHER PTHR10169 686 769 3.7E-280 T 10-11-2016 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR00418 DNA topoisomerase II family signature 500 517 7.5E-70 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR00418 DNA topoisomerase II family signature 520 532 7.5E-70 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR00418 DNA topoisomerase II family signature 701 717 7.5E-70 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR00418 DNA topoisomerase II family signature 264 277 7.5E-70 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR00418 DNA topoisomerase II family signature 112 126 7.5E-70 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR00418 DNA topoisomerase II family signature 416 430 7.5E-70 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR00418 DNA topoisomerase II family signature 34 49 7.5E-70 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR00418 DNA topoisomerase II family signature 69 82 7.5E-70 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 PRINTS PR00418 DNA topoisomerase II family signature 482 498 7.5E-70 T 10-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 SUPERFAMILY SSF54211 219 387 2.09E-53 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 769 3.1E-297 T 10-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 Pfam PF01751 Toprim domain 415 526 1.5E-18 T 10-11-2016 IPR006171 Toprim domain CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 Pfam PF00204 DNA gyrase B 219 386 1.1E-57 T 10-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS00015 2173682b53cbef896b549e2e3ae156ae 769 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 697 758 3.3E-29 T 10-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJM129_RS04855 687ebec61231b569b789ceeb5734830a 365 Pfam PF03601 Conserved hypothetical protein 698 18 342 2.0E-106 T 10-11-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CJM129_RS04855 687ebec61231b569b789ceeb5734830a 365 PANTHER PTHR30106:SF2 10 365 4.2E-82 T 10-11-2016 CJM129_RS04855 687ebec61231b569b789ceeb5734830a 365 PANTHER PTHR30106 10 365 4.2E-82 T 10-11-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 PIRSF PIRSF002583 1 608 9.8E-187 T 10-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 SUPERFAMILY SSF55874 1 203 1.56E-64 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 PRINTS PR00775 90kDa heat shock protein signature 87 104 8.4E-49 T 10-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 PRINTS PR00775 90kDa heat shock protein signature 114 136 8.4E-49 T 10-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 PRINTS PR00775 90kDa heat shock protein signature 69 86 8.4E-49 T 10-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 PRINTS PR00775 90kDa heat shock protein signature 20 42 8.4E-49 T 10-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 PRINTS PR00775 90kDa heat shock protein signature 179 197 8.4E-49 T 10-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 604 28.659 T 10-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 SMART SM00387 21 175 2.1E-9 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 19 28 - T 10-11-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 PANTHER PTHR11528 1 606 2.0E-240 T 10-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 Gene3D G3DSA:3.30.565.10 1 203 3.2E-79 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 21 174 9.4E-16 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 Pfam PF00183 Hsp90 protein 207 606 4.7E-94 T 10-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 PANTHER PTHR11528:SF44 1 606 2.0E-240 T 10-11-2016 CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 SUPERFAMILY SSF110942 494 603 4.32E-27 T 10-11-2016 CJM129_RS02490 132e9423576f89df71b1478ffa439359 608 SUPERFAMILY SSF54211 226 476 3.57E-78 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS08750 d320f86d5fb8bf9e0a0aed4c569f2709 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 14 382 7.3E-120 T 10-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJM129_RS08750 d320f86d5fb8bf9e0a0aed4c569f2709 389 PANTHER PTHR30341 15 383 2.9E-133 T 10-11-2016 CJM129_RS08750 d320f86d5fb8bf9e0a0aed4c569f2709 389 PANTHER PTHR30341:SF0 15 383 2.9E-133 T 10-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJM129_RS08750 d320f86d5fb8bf9e0a0aed4c569f2709 389 Pfam PF06965 Na+/H+ antiporter 1 12 382 2.3E-131 T 10-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJM129_RS08750 d320f86d5fb8bf9e0a0aed4c569f2709 389 Gene3D G3DSA:1.20.1530.10 7 387 2.5E-138 T 10-11-2016 IPR023171 Na/H antiporter domain CJM129_RS08750 d320f86d5fb8bf9e0a0aed4c569f2709 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 8 389 21.548 T 10-11-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 Gene3D G3DSA:3.30.1360.80 1 162 1.3E-71 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 4.1E-51 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 4.1E-51 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 4.1E-51 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 4.1E-51 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 4.1E-51 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 PANTHER PTHR35799 2 163 3.9E-93 T 10-11-2016 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 1.5E-60 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 SUPERFAMILY SSF63411 4 162 4.67E-66 T 10-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 PIRSF PIRSF006160 1 162 2.2E-67 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.841 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS06240 0b902b2224bbfbfe008e5d5c3d8ca323 164 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 155 2.0E-83 T 10-11-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 Pfam PF00919 Uncharacterized protein family UPF0004 3 98 1.2E-28 T 10-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 423 2.1E-117 T 10-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 2 432 54.377 T 10-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 PANTHER PTHR11918 1 420 1.7E-127 T 10-11-2016 IPR023970 Methylthiotransferase/radical SAM-type protein CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 10-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 PANTHER PTHR11918:SF57 1 420 1.7E-127 T 10-11-2016 CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 Gene3D G3DSA:2.40.50.140 388 433 4.5E-4 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 SUPERFAMILY SSF102114 132 354 1.57E-47 T 10-11-2016 CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 Pfam PF04055 Radical SAM superfamily 141 311 4.4E-20 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 386 7.0E-105 T 10-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 Gene3D G3DSA:3.80.30.20 137 360 5.6E-67 T 10-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe CJM129_RS07750 09820149498819e2dce42c150e9e52cf 439 SMART SM00729 136 352 1.1E-46 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS02335 5e878f20b36811383027bfd88e2aa1c8 159 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 156 23.953 T 10-11-2016 IPR022973 Ribosomal protein L10 CJM129_RS02335 5e878f20b36811383027bfd88e2aa1c8 159 Pfam PF00466 Ribosomal protein L10 2 94 7.8E-20 T 10-11-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CJM129_RS02335 5e878f20b36811383027bfd88e2aa1c8 159 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 10-11-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02335 5e878f20b36811383027bfd88e2aa1c8 159 PANTHER PTHR11560 1 157 2.1E-32 T 10-11-2016 CJM129_RS02335 5e878f20b36811383027bfd88e2aa1c8 159 SUPERFAMILY SSF160369 2 155 7.06E-42 T 10-11-2016 CJM129_RS00200 d8df8f8c6e7f16ba3e4ccf4904757c8c 449 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 193 421 2.7E-49 T 10-11-2016 IPR019219 Protein of unknown function DUF2130 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 Gene3D G3DSA:2.40.50.140 521 627 1.0E-35 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 SUPERFAMILY SSF50249 526 626 5.39E-28 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 504 627 2.6E-36 T 10-11-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 36 50 2.0E-33 T 10-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 4 17 2.0E-33 T 10-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 345 356 2.0E-33 T 10-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 84 95 2.0E-33 T 10-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 222 233 2.0E-33 T 10-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 253 268 2.0E-33 T 10-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 SUPERFAMILY SSF47323 350 512 8.11E-29 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 PANTHER PTHR11946 3 584 3.7E-231 T 10-11-2016 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 Pfam PF09334 tRNA synthetases class I (M) 3 357 3.9E-110 T 10-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 SUPERFAMILY SSF52374 3 348 2.15E-107 T 10-11-2016 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 Gene3D G3DSA:1.10.730.10 335 502 5.5E-31 T 10-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 3 491 1.2E-155 T 10-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 502 46.459 T 10-11-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 Gene3D G3DSA:2.170.220.10 113 223 6.4E-42 T 10-11-2016 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 PANTHER PTHR11946:SF1 3 584 3.7E-231 T 10-11-2016 CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 Gene3D G3DSA:3.40.50.620 224 333 1.2E-71 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 Gene3D G3DSA:3.40.50.620 3 110 1.2E-71 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS04050 1f2b3c305e203684c9421da3d5c8470b 628 Pfam PF01588 Putative tRNA binding domain 533 625 2.7E-22 T 10-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 CJM129_RS03930 cee66a3640056e8784c2f304ec1fa6b1 246 PANTHER PTHR23090 1 246 4.9E-75 T 10-11-2016 CJM129_RS03930 cee66a3640056e8784c2f304ec1fa6b1 246 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 1 244 34.174 T 10-11-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 CJM129_RS03930 cee66a3640056e8784c2f304ec1fa6b1 246 Gene3D G3DSA:3.40.50.620 1 242 1.1E-74 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS03930 cee66a3640056e8784c2f304ec1fa6b1 246 TIGRFAM TIGR00552 nadE: NAD+ synthetase 4 242 9.4E-77 T 10-11-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 CJM129_RS03930 cee66a3640056e8784c2f304ec1fa6b1 246 Pfam PF02540 NAD synthase 7 241 4.6E-79 T 10-11-2016 IPR022310 NAD/GMP synthase CJM129_RS03930 cee66a3640056e8784c2f304ec1fa6b1 246 SUPERFAMILY SSF52402 2 239 6.29E-68 T 10-11-2016 CJM129_RS05245 4c5d24148bb0b848ad07ae61aab0bde8 838 SUPERFAMILY SSF69279 20 233 2.47E-24 T 10-11-2016 CJM129_RS05245 4c5d24148bb0b848ad07ae61aab0bde8 838 PANTHER PTHR32305 465 638 2.2E-16 T 10-11-2016 CJM129_RS05245 4c5d24148bb0b848ad07ae61aab0bde8 838 Gene3D G3DSA:3.55.50.10 149 234 9.8E-15 T 10-11-2016 CJM129_RS05245 4c5d24148bb0b848ad07ae61aab0bde8 838 Gene3D G3DSA:2.40.50.230 462 559 9.2E-18 T 10-11-2016 IPR006531 Gp5 N-terminal CJM129_RS05245 4c5d24148bb0b848ad07ae61aab0bde8 838 Pfam PF05954 Phage late control gene D protein (GPD) 73 358 1.4E-17 T 10-11-2016 CJM129_RS05245 4c5d24148bb0b848ad07ae61aab0bde8 838 SUPERFAMILY SSF69255 446 559 4.71E-17 T 10-11-2016 CJM129_RS05245 4c5d24148bb0b848ad07ae61aab0bde8 838 SUPERFAMILY SSF69349 549 777 5.26E-39 T 10-11-2016 CJM129_RS02530 6846aa5f5e144174877ee3ce90a74c99 333 PANTHER PTHR30518 1 327 2.1E-43 T 10-11-2016 CJM129_RS02530 6846aa5f5e144174877ee3ce90a74c99 333 Gene3D G3DSA:3.30.160.60 301 328 1.7E-8 T 10-11-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 CJM129_RS02530 6846aa5f5e144174877ee3ce90a74c99 333 PANTHER PTHR30518:SF2 1 327 2.1E-43 T 10-11-2016 CJM129_RS02530 6846aa5f5e144174877ee3ce90a74c99 333 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 144 327 5.5E-42 T 10-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CJM129_RS02530 6846aa5f5e144174877ee3ce90a74c99 333 Pfam PF02618 YceG-like family 56 328 2.8E-57 T 10-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like CJM129_RS03320 6fc38ac88e7379cb2b45a613bc4999bd 500 Gene3D G3DSA:3.40.50.10750 313 472 1.0E-65 T 10-11-2016 CJM129_RS03320 6fc38ac88e7379cb2b45a613bc4999bd 500 SUPERFAMILY SSF53659 182 499 3.13E-93 T 10-11-2016 CJM129_RS03320 6fc38ac88e7379cb2b45a613bc4999bd 500 Pfam PF01515 Phosphate acetyl/butaryl transferase 180 496 1.7E-123 T 10-11-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CJM129_RS03320 6fc38ac88e7379cb2b45a613bc4999bd 500 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 195 495 1.6E-118 T 10-11-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 CJM129_RS03320 6fc38ac88e7379cb2b45a613bc4999bd 500 PANTHER PTHR23406 1 500 4.8E-45 T 10-11-2016 CJM129_RS03320 6fc38ac88e7379cb2b45a613bc4999bd 500 PANTHER PTHR23406:SF3 1 500 4.8E-45 T 10-11-2016 CJM129_RS07435 74b4e016921a35d4024b28549df2b3d1 156 Gene3D G3DSA:1.25.40.20 22 138 2.4E-29 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS07435 74b4e016921a35d4024b28549df2b3d1 156 SUPERFAMILY SSF48403 22 140 1.55E-29 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS07435 74b4e016921a35d4024b28549df2b3d1 156 SMART SM00248 80 109 0.12 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS07435 74b4e016921a35d4024b28549df2b3d1 156 SMART SM00248 113 143 9.4 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS07435 74b4e016921a35d4024b28549df2b3d1 156 SMART SM00248 47 76 0.0023 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS07435 74b4e016921a35d4024b28549df2b3d1 156 Pfam PF13857 Ankyrin repeats (many copies) 34 85 1.4E-6 T 10-11-2016 CJM129_RS07435 74b4e016921a35d4024b28549df2b3d1 156 Pfam PF13637 Ankyrin repeats (many copies) 91 134 9.3E-8 T 10-11-2016 CJM129_RS07435 74b4e016921a35d4024b28549df2b3d1 156 PANTHER PTHR24123 23 134 5.4E-27 T 10-11-2016 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PANTHER PTHR21256:SF14 1 428 1.6E-239 T 10-11-2016 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 10-11-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.129 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 Gene3D G3DSA:3.40.50.1980 27 237 6.3E-79 T 10-11-2016 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PANTHER PTHR21256 1 428 1.6E-239 T 10-11-2016 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 SUPERFAMILY SSF53720 3 424 9.02E-87 T 10-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 Pfam PF00815 Histidinol dehydrogenase 25 424 1.3E-163 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 4.3E-159 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PIRSF PIRSF000099 1 427 2.1E-160 T 10-11-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 3.7E-93 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 3.7E-93 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 3.7E-93 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 3.7E-93 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 3.7E-93 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 3.7E-93 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 3.7E-93 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS08450 19f7ce83b9ae6e6f05f65f922b7970de 428 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 3.7E-93 T 10-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 CJM129_RS00640 4e3e92d531512d3f9db71cc5ed078b0d 149 SUPERFAMILY SSF75217 2 147 2.93E-39 T 10-11-2016 IPR029028 Alpha/beta knot methyltransferases CJM129_RS00640 4e3e92d531512d3f9db71cc5ed078b0d 149 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 149 23.262 T 10-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS00640 4e3e92d531512d3f9db71cc5ed078b0d 149 PANTHER PTHR33603 19 149 2.8E-29 T 10-11-2016 CJM129_RS00640 4e3e92d531512d3f9db71cc5ed078b0d 149 Gene3D G3DSA:3.40.1280.10 2 149 1.6E-41 T 10-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJM129_RS00640 4e3e92d531512d3f9db71cc5ed078b0d 149 PANTHER PTHR33603:SF1 19 149 2.8E-29 T 10-11-2016 CJM129_RS00640 4e3e92d531512d3f9db71cc5ed078b0d 149 Pfam PF02590 Predicted SPOUT methyltransferase 2 148 1.9E-39 T 10-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS00640 4e3e92d531512d3f9db71cc5ed078b0d 149 PIRSF PIRSF004505 1 149 3.7E-46 T 10-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 PANTHER PTHR11817:SF3 1 477 1.0E-191 T 10-11-2016 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 SUPERFAMILY SSF50800 71 170 4.71E-21 T 10-11-2016 IPR011037 Pyruvate kinase-like, insert domain CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 470 5.8E-149 T 10-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 Pfam PF00224 Pyruvate kinase, barrel domain 3 342 4.6E-120 T 10-11-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 PANTHER PTHR11817 1 477 1.0E-191 T 10-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 SUPERFAMILY SSF52935 326 470 4.45E-28 T 10-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 470 9.6E-26 T 10-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 Gene3D G3DSA:2.40.33.10 74 170 1.9E-22 T 10-11-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 Gene3D G3DSA:3.20.20.60 171 328 6.2E-97 T 10-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 Gene3D G3DSA:3.20.20.60 3 73 6.2E-97 T 10-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 Gene3D G3DSA:3.40.1380.20 329 469 6.4E-32 T 10-11-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 SUPERFAMILY SSF51621 170 345 3.0E-89 T 10-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 SUPERFAMILY SSF51621 2 76 3.0E-89 T 10-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 PRINTS PR01050 Pyruvate kinase family signature 189 203 1.0E-57 T 10-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 PRINTS PR01050 Pyruvate kinase family signature 219 245 1.0E-57 T 10-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 PRINTS PR01050 Pyruvate kinase family signature 271 295 1.0E-57 T 10-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 PRINTS PR01050 Pyruvate kinase family signature 315 331 1.0E-57 T 10-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 PRINTS PR01050 Pyruvate kinase family signature 296 314 1.0E-57 T 10-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.0E-57 T 10-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS01875 90e9ef65d70ab7c913a617fd657802f0 480 PRINTS PR01050 Pyruvate kinase family signature 246 270 1.0E-57 T 10-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 Pfam PF00137 ATP synthase subunit C 39 101 4.2E-15 T 10-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 ProSitePatterns PS00605 ATP synthase c subunit signature. 68 89 - T 10-11-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 PRINTS PR00124 ATP synthase C subunit signature 61 76 7.7E-15 T 10-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 PRINTS PR00124 ATP synthase C subunit signature 78 103 7.7E-15 T 10-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 PRINTS PR00124 ATP synthase C subunit signature 40 59 7.7E-15 T 10-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 Gene3D G3DSA:1.20.20.10 37 104 2.2E-22 T 10-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 PANTHER PTHR10031 35 106 5.1E-16 T 10-11-2016 CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 Hamap MF_01396 ATP synthase subunit c [atpH]. 37 105 15.978 T 10-11-2016 CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 48 105 2.3E-14 T 10-11-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CJM129_RS04515 56b213912f07a5dcd29ecfd59c05b3c5 112 SUPERFAMILY SSF81333 31 107 5.89E-19 T 10-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CJM129_RS04885 af2f776e70c8105eec07e09afbec4ecc 536 PANTHER PTHR23076:SF37 85 404 1.2E-134 T 10-11-2016 CJM129_RS04885 af2f776e70c8105eec07e09afbec4ecc 536 Gene3D G3DSA:3.40.50.300 144 324 1.1E-62 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04885 af2f776e70c8105eec07e09afbec4ecc 536 Gene3D G3DSA:1.10.8.60 325 386 9.0E-17 T 10-11-2016 CJM129_RS04885 af2f776e70c8105eec07e09afbec4ecc 536 SUPERFAMILY SSF52540 144 384 4.09E-66 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04885 af2f776e70c8105eec07e09afbec4ecc 536 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 186 315 4.4E-43 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS04885 af2f776e70c8105eec07e09afbec4ecc 536 SUPERFAMILY SSF140990 395 534 4.58E-22 T 10-11-2016 CJM129_RS04885 af2f776e70c8105eec07e09afbec4ecc 536 SMART SM00382 182 318 3.8E-21 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS04885 af2f776e70c8105eec07e09afbec4ecc 536 ProSitePatterns PS00674 AAA-protein family signature. 286 304 - T 10-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CJM129_RS04885 af2f776e70c8105eec07e09afbec4ecc 536 PANTHER PTHR23076 85 404 1.2E-134 T 10-11-2016 CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 PANTHER PTHR30435 1 128 4.7E-75 T 10-11-2016 CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 PANTHER PTHR30435 420 545 4.7E-75 T 10-11-2016 CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 463 543 3.1E-19 T 10-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 525 2.5E-63 T 10-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 PANTHER PTHR30435:SF1 1 128 4.7E-75 T 10-11-2016 CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 PANTHER PTHR30435:SF1 420 545 4.7E-75 T 10-11-2016 CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 Pfam PF00460 Flagella basal body rod protein 5 35 2.5E-7 T 10-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 10-11-2016 IPR019776 Flagellar basal body rod protein, conserved site CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 SUPERFAMILY SSF117143 84 138 4.05E-47 T 10-11-2016 CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 SUPERFAMILY SSF117143 297 505 4.05E-47 T 10-11-2016 CJM129_RS00235 31212b0f085c2f24d93a7f936dde4401 545 SUPERFAMILY SSF117143 172 214 4.05E-47 T 10-11-2016 CJM129_RS00425 55c2a25b5ce1de2292983c1c6fecba0b 374 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 7 372 1.3E-38 T 10-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CJM129_RS00425 55c2a25b5ce1de2292983c1c6fecba0b 374 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 357 2.4E-74 T 10-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CJM129_RS00425 55c2a25b5ce1de2292983c1c6fecba0b 374 PANTHER PTHR30365:SF6 3 374 1.7E-82 T 10-11-2016 CJM129_RS00425 55c2a25b5ce1de2292983c1c6fecba0b 374 PANTHER PTHR30365 3 374 1.7E-82 T 10-11-2016 CJM129_RS07980 d45ed29efab7adb6599337ba69266319 75 Pfam PF01206 Sulfurtransferase TusA 6 74 2.0E-18 T 10-11-2016 IPR001455 TusA-like domain CJM129_RS07980 d45ed29efab7adb6599337ba69266319 75 Gene3D G3DSA:3.30.110.40 3 74 1.1E-27 T 10-11-2016 IPR001455 TusA-like domain CJM129_RS07980 d45ed29efab7adb6599337ba69266319 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 10-11-2016 IPR001455 TusA-like domain CJM129_RS07980 d45ed29efab7adb6599337ba69266319 75 PANTHER PTHR33279 1 75 7.4E-18 T 10-11-2016 CJM129_RS07980 d45ed29efab7adb6599337ba69266319 75 SUPERFAMILY SSF64307 2 74 2.88E-21 T 10-11-2016 IPR001455 TusA-like domain CJM129_RS07100 35cf8447332d8d1b0c177fa24e07b921 180 SUPERFAMILY SSF51161 2 179 6.24E-29 T 10-11-2016 IPR011004 Trimeric LpxA-like CJM129_RS07100 35cf8447332d8d1b0c177fa24e07b921 180 Gene3D G3DSA:3.40.50.20 2 84 1.2E-10 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS07100 35cf8447332d8d1b0c177fa24e07b921 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 150 4.1E-5 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS07100 35cf8447332d8d1b0c177fa24e07b921 180 Gene3D G3DSA:2.160.10.10 87 178 2.8E-20 T 10-11-2016 CJM129_RS06315 fa9017a133c62f803e51df47cf93843b 460 Pfam PF01565 FAD binding domain 39 178 3.5E-41 T 10-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CJM129_RS06315 fa9017a133c62f803e51df47cf93843b 460 PANTHER PTHR11748:SF85 28 458 3.7E-159 T 10-11-2016 CJM129_RS06315 fa9017a133c62f803e51df47cf93843b 460 Gene3D G3DSA:3.30.465.10 96 216 1.2E-38 T 10-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJM129_RS06315 fa9017a133c62f803e51df47cf93843b 460 Gene3D G3DSA:1.10.45.10 419 460 1.4E-16 T 10-11-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CJM129_RS06315 fa9017a133c62f803e51df47cf93843b 460 Gene3D G3DSA:3.30.43.10 3 95 4.9E-29 T 10-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CJM129_RS06315 fa9017a133c62f803e51df47cf93843b 460 PANTHER PTHR11748 28 458 3.7E-159 T 10-11-2016 CJM129_RS06315 fa9017a133c62f803e51df47cf93843b 460 SUPERFAMILY SSF55103 219 459 5.23E-66 T 10-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CJM129_RS06315 fa9017a133c62f803e51df47cf93843b 460 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 2.5E-65 T 10-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CJM129_RS06315 fa9017a133c62f803e51df47cf93843b 460 SUPERFAMILY SSF56176 4 216 1.82E-67 T 10-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJM129_RS06290 2846f2fcb47fcabcf1fbd1fe5b27ecdc 208 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 171 8.1E-36 T 10-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CJM129_RS06290 2846f2fcb47fcabcf1fbd1fe5b27ecdc 208 Gene3D G3DSA:3.40.50.10420 2 180 8.8E-28 T 10-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CJM129_RS06290 2846f2fcb47fcabcf1fbd1fe5b27ecdc 208 SUPERFAMILY SSF100950 1 185 1.3E-36 T 10-11-2016 CJM129_RS06290 2846f2fcb47fcabcf1fbd1fe5b27ecdc 208 PANTHER PTHR23407:SF1 23 147 6.8E-17 T 10-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CJM129_RS06290 2846f2fcb47fcabcf1fbd1fe5b27ecdc 208 PANTHER PTHR23407 23 147 6.8E-17 T 10-11-2016 CJM129_RS06290 2846f2fcb47fcabcf1fbd1fe5b27ecdc 208 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 9 140 1.6E-16 T 10-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 175 188 - T 10-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 Pfam PF00342 Phosphoglucose isomerase 56 405 3.9E-31 T 10-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 PANTHER PTHR11469:SF1 58 405 7.1E-70 T 10-11-2016 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 380 397 - T 10-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 PRINTS PR00662 Glucose-6-phosphate isomerase signature 380 393 6.0E-16 T 10-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 PRINTS PR00662 Glucose-6-phosphate isomerase signature 171 189 6.0E-16 T 10-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 PRINTS PR00662 Glucose-6-phosphate isomerase signature 61 80 6.0E-16 T 10-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 PRINTS PR00662 Glucose-6-phosphate isomerase signature 366 380 6.0E-16 T 10-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 PRINTS PR00662 Glucose-6-phosphate isomerase signature 242 263 6.0E-16 T 10-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 3 406 22.445 T 10-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 SUPERFAMILY SSF53697 29 405 1.56E-97 T 10-11-2016 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 Gene3D G3DSA:3.40.50.10490 55 173 1.6E-27 T 10-11-2016 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 PANTHER PTHR11469 58 405 7.1E-70 T 10-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 CJM129_RS08150 eeee8bcfd44fe5791da533709df5c886 406 Gene3D G3DSA:3.40.50.10490 174 389 1.4E-65 T 10-11-2016 CJM129_RS02270 9f96278f409a171b77da5078b48d215f 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 106 5.4E-16 T 10-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CJM129_RS02270 9f96278f409a171b77da5078b48d215f 218 Gene3D G3DSA:1.10.3720.10 12 217 9.6E-38 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02270 9f96278f409a171b77da5078b48d215f 218 SUPERFAMILY SSF161098 12 209 1.31E-38 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02270 9f96278f409a171b77da5078b48d215f 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 202 1.1E-14 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02270 9f96278f409a171b77da5078b48d215f 218 PANTHER PTHR30614 8 217 6.2E-48 T 10-11-2016 CJM129_RS06775 6a11347104de995233e02db7b80d30d7 592 Pfam PF07693 KAP family P-loop domain 7 74 3.2E-6 T 10-11-2016 IPR011646 KAP family P-loop domain CJM129_RS06775 6a11347104de995233e02db7b80d30d7 592 SUPERFAMILY SSF52540 5 154 4.57E-11 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06775 6a11347104de995233e02db7b80d30d7 592 SUPERFAMILY SSF52540 249 321 4.57E-11 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06775 6a11347104de995233e02db7b80d30d7 592 Gene3D G3DSA:3.40.50.300 5 163 1.4E-8 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03510 ef5da94b25cd252705ce3dcc7b03b587 327 SUPERFAMILY SSF144083 262 325 1.27E-18 T 10-11-2016 CJM129_RS03510 ef5da94b25cd252705ce3dcc7b03b587 327 SUPERFAMILY SSF143865 1 260 4.84E-32 T 10-11-2016 CJM129_RS03510 ef5da94b25cd252705ce3dcc7b03b587 327 PANTHER PTHR21535:SF37 14 327 1.3E-69 T 10-11-2016 CJM129_RS03510 ef5da94b25cd252705ce3dcc7b03b587 327 PANTHER PTHR21535 14 327 1.3E-69 T 10-11-2016 CJM129_RS03510 ef5da94b25cd252705ce3dcc7b03b587 327 Pfam PF01544 CorA-like Mg2+ transporter protein 27 323 3.5E-53 T 10-11-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CJM129_RS03510 ef5da94b25cd252705ce3dcc7b03b587 327 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 7 327 3.4E-76 T 10-11-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CJM129_RS03510 ef5da94b25cd252705ce3dcc7b03b587 327 Gene3D G3DSA:1.20.58.340 251 327 4.7E-26 T 10-11-2016 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 PANTHER PTHR10982 1 306 1.6E-87 T 10-11-2016 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 SUPERFAMILY SSF52151 3 121 1.86E-46 T 10-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 SUPERFAMILY SSF52151 190 304 1.86E-46 T 10-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 Gene3D G3DSA:3.30.70.250 128 196 8.8E-23 T 10-11-2016 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 PIRSF PIRSF000446 1 306 7.6E-71 T 10-11-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 Gene3D G3DSA:3.40.366.10 197 294 1.2E-45 T 10-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 Gene3D G3DSA:3.40.366.10 2 121 1.2E-45 T 10-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 Pfam PF00698 Acyl transferase domain 5 272 6.8E-21 T 10-11-2016 IPR014043 Acyl transferase CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 SUPERFAMILY SSF55048 129 193 1.7E-14 T 10-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 287 9.1E-87 T 10-11-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CJM129_RS00590 39aaa632d1618438b1d140c0490415fe 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 298 7.9E-13 T 10-11-2016 IPR020801 Polyketide synthase, acyl transferase domain CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PRINTS PR00463 E-class P450 group I signature 358 382 4.7E-24 T 10-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PRINTS PR00463 E-class P450 group I signature 256 273 4.7E-24 T 10-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PRINTS PR00463 E-class P450 group I signature 276 302 4.7E-24 T 10-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PRINTS PR00463 E-class P450 group I signature 399 422 4.7E-24 T 10-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PRINTS PR00463 E-class P450 group I signature 389 399 4.7E-24 T 10-11-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 Gene3D G3DSA:1.10.630.10 41 452 1.9E-106 T 10-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 Pfam PF00067 Cytochrome P450 45 432 5.8E-84 T 10-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 SUPERFAMILY SSF48264 40 451 3.54E-101 T 10-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PANTHER PTHR24291:SF46 52 452 1.4E-96 T 10-11-2016 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PRINTS PR00385 P450 superfamily signature 399 410 3.7E-14 T 10-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PRINTS PR00385 P450 superfamily signature 390 399 3.7E-14 T 10-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PRINTS PR00385 P450 superfamily signature 319 330 3.7E-14 T 10-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PRINTS PR00385 P450 superfamily signature 267 284 3.7E-14 T 10-11-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 PANTHER PTHR24291 52 452 1.4E-96 T 10-11-2016 CJM129_RS07540 72a0ab4028c0d1ce2c89d4bd2032bb60 453 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 392 401 - T 10-11-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 SMART SM00437 243 505 1.5E-112 T 10-11-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 643 56.507 T 10-11-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Pfam PF01751 Toprim domain 5 114 2.3E-28 T 10-11-2016 IPR006171 Toprim domain CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Gene3D G3DSA:3.40.50.140 1 135 7.9E-45 T 10-11-2016 IPR006171 Toprim domain CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 SMART SM00436 105 193 4.1E-48 T 10-11-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 SUPERFAMILY SSF57783 626 663 1.87E-5 T 10-11-2016 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 PANTHER PTHR11390 1 693 8.3E-293 T 10-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 605 4.5E-244 T 10-11-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 667 696 3.8E-4 T 10-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 570 606 1.9E-14 T 10-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 627 664 7.3E-13 T 10-11-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 78 91 7.1E-35 T 10-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 163 181 7.1E-35 T 10-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 468 482 7.1E-35 T 10-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 7.1E-35 T 10-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 371 387 7.1E-35 T 10-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Gene3D G3DSA:1.10.460.10 136 183 1.5E-55 T 10-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Gene3D G3DSA:1.10.460.10 452 556 1.5E-55 T 10-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 SUPERFAMILY SSF56712 3 582 1.7E-186 T 10-11-2016 IPR023405 DNA topoisomerase, type IA, core domain CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 280 302 - T 10-11-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 SUPERFAMILY SSF57783 564 608 7.57E-11 T 10-11-2016 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 PANTHER PTHR11390:SF27 1 693 8.3E-293 T 10-11-2016 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Gene3D G3DSA:3.30.65.10 571 608 1.6E-12 T 10-11-2016 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Gene3D G3DSA:3.30.65.10 622 660 4.7E-6 T 10-11-2016 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Pfam PF01131 DNA topoisomerase 129 542 2.5E-130 T 10-11-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 SMART SM00493 3 104 1.5E-29 T 10-11-2016 IPR006171 Toprim domain CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Gene3D G3DSA:2.70.20.10 185 314 1.1E-30 T 10-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CJM129_RS08990 75370db92065db536f9b7765e7b0ef00 700 Gene3D G3DSA:2.70.20.10 316 451 1.2E-32 T 10-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CJM129_RS03125 6b4c201e62c53b8c21573f4d71af03f9 275 Gene3D G3DSA:3.30.70.1070 202 259 1.0E-7 T 10-11-2016 IPR007730 Sporulation-related domain GO:0042834 CJM129_RS03125 6b4c201e62c53b8c21573f4d71af03f9 275 Pfam PF03330 Lytic transglycolase 77 166 5.5E-27 T 10-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJM129_RS03125 6b4c201e62c53b8c21573f4d71af03f9 275 PANTHER PTHR34183 57 174 1.3E-54 T 10-11-2016 CJM129_RS03125 6b4c201e62c53b8c21573f4d71af03f9 275 SUPERFAMILY SSF110997 202 262 4.84E-9 T 10-11-2016 IPR007730 Sporulation-related domain GO:0042834 CJM129_RS03125 6b4c201e62c53b8c21573f4d71af03f9 275 Pfam PF05036 Sporulation related domain 203 274 2.5E-12 T 10-11-2016 IPR007730 Sporulation-related domain GO:0042834 CJM129_RS03125 6b4c201e62c53b8c21573f4d71af03f9 275 SUPERFAMILY SSF50685 80 166 9.07E-13 T 10-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJM129_RS03125 6b4c201e62c53b8c21573f4d71af03f9 275 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 80 181 1.5E-52 T 10-11-2016 IPR012997 Rare lipoprotein A CJM129_RS03125 6b4c201e62c53b8c21573f4d71af03f9 275 PANTHER PTHR34183:SF2 57 174 1.3E-54 T 10-11-2016 CJM129_RS03125 6b4c201e62c53b8c21573f4d71af03f9 275 Gene3D G3DSA:2.40.40.10 117 168 1.5E-5 T 10-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 25 4.2E-4 T 10-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 SUPERFAMILY SSF50692 789 924 6.63E-42 T 10-11-2016 IPR009010 Aspartate decarboxylase-like domain CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 SMART SM00926 35 89 7.3E-14 T 10-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Pfam PF00384 Molybdopterin oxidoreductase 92 612 2.5E-68 T 10-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 PANTHER PTHR11615:SF123 1 282 4.1E-290 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Gene3D G3DSA:3.40.228.10 176 291 1.1E-45 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Gene3D G3DSA:3.40.228.10 362 443 1.1E-45 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Gene3D G3DSA:3.40.50.740 444 619 8.6E-74 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Gene3D G3DSA:3.40.50.740 694 733 8.6E-74 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Gene3D G3DSA:3.40.50.740 92 175 8.6E-74 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Pfam PF01568 Molydopterin dinucleotide binding domain 810 918 4.3E-23 T 10-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 40 57 - T 10-11-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Gene3D G3DSA:2.40.40.20 786 924 3.8E-43 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Gene3D G3DSA:2.40.40.20 734 752 3.8E-43 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 PANTHER PTHR11615:SF123 716 924 4.1E-290 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 1 924 0.0 T 10-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 PANTHER PTHR11615 389 634 4.1E-290 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 PANTHER PTHR11615 1 282 4.1E-290 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 PANTHER PTHR11615 716 924 4.1E-290 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 SUPERFAMILY SSF53706 30 626 1.26E-168 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 36 88 5.1E-17 T 10-11-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 PANTHER PTHR11615:SF123 389 634 4.1E-290 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Gene3D G3DSA:2.20.25.90 32 91 1.1E-20 T 10-11-2016 CJM129_RS03780 400b09c8d47417675b2278e46f13bd11 924 Hamap MF_01630 Nitrate reductase [napA]. 1 924 28.862 T 10-11-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 Gene3D G3DSA:3.30.479.20 57 149 9.3E-17 T 10-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 Gene3D G3DSA:1.10.8.10 2 55 9.7E-28 T 10-11-2016 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 Pfam PF00889 Elongation factor TS 73 236 3.2E-50 T 10-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 Pfam PF00889 Elongation factor TS 242 340 4.2E-24 T 10-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 356 9.7E-100 T 10-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 Gene3D G3DSA:3.30.479.20 297 339 5.0E-26 T 10-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 Gene3D G3DSA:3.30.479.20 153 197 5.0E-26 T 10-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 10-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 SUPERFAMILY SSF54713 150 214 1.64E-29 T 10-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 SUPERFAMILY SSF54713 260 340 1.64E-29 T 10-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 SUPERFAMILY SSF54713 56 146 2.62E-17 T 10-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 Hamap MF_00050 Elongation factor Ts [tsf]. 1 357 62.795 T 10-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 10-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 SUPERFAMILY SSF46934 4 55 1.38E-18 T 10-11-2016 IPR009060 UBA-like GO:0005515 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 Gene3D G3DSA:1.10.286.20 254 290 4.0E-5 T 10-11-2016 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 PANTHER PTHR11741 263 357 1.2E-105 T 10-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CJM129_RS06155 b276eb6cc7014f3d0567ea77755a4416 357 PANTHER PTHR11741 1 217 1.2E-105 T 10-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 SUPERFAMILY SSF50475 1 317 9.81E-95 T 10-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5 417 4.9E-120 T 10-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 SUPERFAMILY SSF143968 511 579 1.96E-5 T 10-11-2016 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 PANTHER PTHR30108:SF1 1 482 7.4E-122 T 10-11-2016 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 Gene3D G3DSA:3.40.1670.10 332 446 1.4E-28 T 10-11-2016 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 Gene3D G3DSA:3.40.1670.10 467 574 3.0E-12 T 10-11-2016 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 3 440 2.0E-190 T 10-11-2016 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 SUPERFAMILY SSF143968 318 452 1.01E-37 T 10-11-2016 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 PANTHER PTHR30108 1 482 7.4E-122 T 10-11-2016 CJM129_RS02615 555755ee0eb3270ff9d7d6ecfcb16354 600 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 1 446 4.2E-131 T 10-11-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 117 31.074 T 10-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 PIRSF PIRSF002191 1 118 2.6E-45 T 10-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 116 8.2E-47 T 10-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.4E-34 T 10-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.4E-34 T 10-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.4E-34 T 10-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 Pfam PF01245 Ribosomal protein L19 5 115 1.5E-44 T 10-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 10-11-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 SUPERFAMILY SSF50104 2 117 3.41E-41 T 10-11-2016 IPR008991 Translation protein SH3-like domain CJM129_RS03450 b99edab6f81a632e8516caf35a143d58 118 PANTHER PTHR15680 1 118 1.8E-44 T 10-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 Gene3D G3DSA:3.40.1690.10 216 352 3.6E-59 T 10-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 PANTHER PTHR30531:SF0 1 359 2.4E-121 T 10-11-2016 CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 1.1E-42 T 10-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 300 321 1.1E-42 T 10-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 1.1E-42 T 10-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 270 285 1.1E-42 T 10-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 1.1E-42 T 10-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 351 1.3E-138 T 10-11-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 SUPERFAMILY SSF160544 242 349 1.31E-39 T 10-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 345 3.4E-121 T 10-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJM129_RS01595 608e5417a81ed0fc8383f41768446bcb 362 PANTHER PTHR30531 1 359 2.4E-121 T 10-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJM129_RS05100 fa325cf6390a30d53c2d63fe1cd49bdf 484 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 58 482 7.0E-171 T 10-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CJM129_RS05100 fa325cf6390a30d53c2d63fe1cd49bdf 484 PANTHER PTHR35565:SF1 8 484 2.4E-270 T 10-11-2016 CJM129_RS05100 fa325cf6390a30d53c2d63fe1cd49bdf 484 PANTHER PTHR35565 8 484 2.4E-270 T 10-11-2016 CJM129_RS05100 fa325cf6390a30d53c2d63fe1cd49bdf 484 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 11 482 1.9E-209 T 10-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CJM129_RS07935 77daafffa0464793376a48476153a103 403 SMART SM00387 290 400 2.8E-24 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS07935 77daafffa0464793376a48476153a103 403 Gene3D G3DSA:3.30.565.10 255 400 5.7E-30 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS07935 77daafffa0464793376a48476153a103 403 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 399 3.6E-17 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS07935 77daafffa0464793376a48476153a103 403 Pfam PF13426 PAS domain 22 118 4.6E-11 T 10-11-2016 IPR000014 PAS domain CJM129_RS07935 77daafffa0464793376a48476153a103 403 Gene3D G3DSA:3.30.450.20 18 118 5.4E-18 T 10-11-2016 CJM129_RS07935 77daafffa0464793376a48476153a103 403 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 127 7.6E-14 T 10-11-2016 IPR000014 PAS domain CJM129_RS07935 77daafffa0464793376a48476153a103 403 SUPERFAMILY SSF55785 19 116 6.28E-19 T 10-11-2016 IPR000014 PAS domain CJM129_RS07935 77daafffa0464793376a48476153a103 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 358 1.4E-9 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS07935 77daafffa0464793376a48476153a103 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 379 1.4E-9 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS07935 77daafffa0464793376a48476153a103 403 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 344 1.4E-9 T 10-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 CJM129_RS07935 77daafffa0464793376a48476153a103 403 SUPERFAMILY SSF55874 253 398 1.83E-28 T 10-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJM129_RS07935 77daafffa0464793376a48476153a103 403 PANTHER PTHR24423 23 137 2.3E-40 T 10-11-2016 CJM129_RS07935 77daafffa0464793376a48476153a103 403 PANTHER PTHR24423 183 403 2.3E-40 T 10-11-2016 CJM129_RS04165 b81d29446ac17f8066f6461b809a471a 594 Pfam PF01063 Amino-transferase class IV 362 592 6.9E-27 T 10-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CJM129_RS04165 b81d29446ac17f8066f6461b809a471a 594 SUPERFAMILY SSF56752 336 591 1.57E-33 T 10-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CJM129_RS04165 b81d29446ac17f8066f6461b809a471a 594 Gene3D G3DSA:3.30.470.10 362 400 1.3E-4 T 10-11-2016 CJM129_RS04165 b81d29446ac17f8066f6461b809a471a 594 Pfam PF00425 chorismate binding enzyme 100 351 6.0E-78 T 10-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal CJM129_RS04165 b81d29446ac17f8066f6461b809a471a 594 SUPERFAMILY SSF56322 31 355 6.8E-87 T 10-11-2016 IPR005801 ADC synthase GO:0009058 CJM129_RS04165 b81d29446ac17f8066f6461b809a471a 594 Gene3D G3DSA:3.60.120.10 53 354 3.0E-92 T 10-11-2016 IPR005801 ADC synthase GO:0009058 CJM129_RS04165 b81d29446ac17f8066f6461b809a471a 594 PANTHER PTHR11236 36 392 7.4E-98 T 10-11-2016 CJM129_RS04165 b81d29446ac17f8066f6461b809a471a 594 Gene3D G3DSA:3.20.10.10 477 588 7.2E-29 T 10-11-2016 CJM129_RS04165 b81d29446ac17f8066f6461b809a471a 594 PANTHER PTHR11236:SF18 36 392 7.4E-98 T 10-11-2016 CJM129_RS05065 fd1a46519b13d88ccd19c4ac0278d3cc 1175 Gene3D G3DSA:3.40.50.300 119 289 9.4E-7 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05065 fd1a46519b13d88ccd19c4ac0278d3cc 1175 Pfam PF14331 ImcF-related N-terminal domain 214 446 8.8E-41 T 10-11-2016 IPR025743 ImcF-related, N-terminal domain CJM129_RS05065 fd1a46519b13d88ccd19c4ac0278d3cc 1175 Pfam PF06761 Intracellular multiplication and human macrophage-killing 544 801 3.8E-27 T 10-11-2016 IPR009612 ImcF-related CJM129_RS05065 fd1a46519b13d88ccd19c4ac0278d3cc 1175 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 20 1125 6.9E-143 T 10-11-2016 IPR017731 Type VI secretion system, IcmF CJM129_RS05065 fd1a46519b13d88ccd19c4ac0278d3cc 1175 Pfam PF06744 Type VI secretion protein IcmF C-terminal 921 1121 1.2E-40 T 10-11-2016 IPR010623 Type VI secretion system IcmF, C-terminal CJM129_RS05065 fd1a46519b13d88ccd19c4ac0278d3cc 1175 PANTHER PTHR36153 23 197 1.5E-68 T 10-11-2016 CJM129_RS05065 fd1a46519b13d88ccd19c4ac0278d3cc 1175 PANTHER PTHR36153 217 1173 1.5E-68 T 10-11-2016 CJM129_RS05065 fd1a46519b13d88ccd19c4ac0278d3cc 1175 SUPERFAMILY SSF52540 123 182 2.55E-9 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05065 fd1a46519b13d88ccd19c4ac0278d3cc 1175 SUPERFAMILY SSF52540 216 304 2.55E-9 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07845 c8cfe5b310d2e4b4f73c27e5d8d23dd9 470 PRINTS PR00811 Bacterial general secretion pathway protein D signature 276 300 8.0E-12 T 10-11-2016 IPR001775 GspD/PilQ family CJM129_RS07845 c8cfe5b310d2e4b4f73c27e5d8d23dd9 470 PRINTS PR00811 Bacterial general secretion pathway protein D signature 418 436 8.0E-12 T 10-11-2016 IPR001775 GspD/PilQ family CJM129_RS07845 c8cfe5b310d2e4b4f73c27e5d8d23dd9 470 PRINTS PR00811 Bacterial general secretion pathway protein D signature 441 455 8.0E-12 T 10-11-2016 IPR001775 GspD/PilQ family CJM129_RS07845 c8cfe5b310d2e4b4f73c27e5d8d23dd9 470 PRINTS PR00811 Bacterial general secretion pathway protein D signature 214 224 8.0E-12 T 10-11-2016 IPR001775 GspD/PilQ family CJM129_RS07845 c8cfe5b310d2e4b4f73c27e5d8d23dd9 470 PANTHER PTHR30332 180 456 6.4E-49 T 10-11-2016 CJM129_RS07845 c8cfe5b310d2e4b4f73c27e5d8d23dd9 470 Pfam PF00263 Bacterial type II and III secretion system protein 281 454 9.4E-44 T 10-11-2016 IPR004846 Type II/III secretion system GO:0009306 CJM129_RS07845 c8cfe5b310d2e4b4f73c27e5d8d23dd9 470 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 180 453 5.4E-101 T 10-11-2016 IPR013358 Pilus biogenesis, MshL CJM129_RS05820 1fb27ff23488d806a9fbfd3f453efd31 212 PANTHER PTHR33508 5 212 2.0E-27 T 10-11-2016 CJM129_RS05820 1fb27ff23488d806a9fbfd3f453efd31 212 Pfam PF01914 MarC family integral membrane protein 12 210 3.7E-28 T 10-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 SUPERFAMILY SSF56059 116 324 7.24E-69 T 10-11-2016 CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 10-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 10-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 7.8E-38 T 10-11-2016 IPR005482 Biotin carboxylase, C-terminal CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 2.4E-81 T 10-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 6.7E-41 T 10-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 PANTHER PTHR18866 3 443 1.8E-275 T 10-11-2016 CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 Gene3D G3DSA:3.40.50.20 3 130 2.9E-47 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 Gene3D G3DSA:3.30.1490.20 131 203 1.2E-30 T 10-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 Gene3D G3DSA:3.30.470.20 204 443 8.5E-100 T 10-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 SUPERFAMILY SSF52440 3 114 4.82E-44 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 3 442 6.0E-201 T 10-11-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 SMART SM00878 336 441 2.7E-56 T 10-11-2016 IPR005482 Biotin carboxylase, C-terminal CJM129_RS06960 460dcac67e71ecafed90d4d99a30146e 443 SUPERFAMILY SSF51246 331 443 1.36E-41 T 10-11-2016 IPR011054 Rudiment single hybrid motif CJM129_RS09090 f105d1ebc936c4a746b56432d65319b0 204 Pfam PF00573 Ribosomal protein L4/L1 family 24 202 1.4E-54 T 10-11-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CJM129_RS09090 f105d1ebc936c4a746b56432d65319b0 204 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 24 201 1.3E-59 T 10-11-2016 IPR013005 50S ribosomal protein uL4 CJM129_RS09090 f105d1ebc936c4a746b56432d65319b0 204 Gene3D G3DSA:3.40.1370.10 56 201 1.1E-42 T 10-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CJM129_RS09090 f105d1ebc936c4a746b56432d65319b0 204 PANTHER PTHR10746 1 200 5.6E-51 T 10-11-2016 IPR013005 50S ribosomal protein uL4 CJM129_RS09090 f105d1ebc936c4a746b56432d65319b0 204 SUPERFAMILY SSF52166 1 201 1.57E-59 T 10-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CJM129_RS09090 f105d1ebc936c4a746b56432d65319b0 204 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 204 26.045 T 10-11-2016 IPR013005 50S ribosomal protein uL4 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 PANTHER PTHR11707 7 330 8.8E-99 T 10-11-2016 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 PIRSF PIRSF001220 2 331 1.3E-93 T 10-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 Gene3D G3DSA:3.40.50.40 219 328 1.3E-36 T 10-11-2016 IPR027473 L-asparaginase, C-terminal domain CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 10 18 - T 10-11-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 Pfam PF00710 Asparaginase, N-terminal 7 198 6.4E-61 T 10-11-2016 IPR027474 L-asparaginase, N-terminal CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 Gene3D G3DSA:3.40.50.1170 4 214 6.1E-73 T 10-11-2016 IPR027474 L-asparaginase, N-terminal CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 PANTHER PTHR11707:SF29 7 330 8.8E-99 T 10-11-2016 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 88 98 - T 10-11-2016 IPR027475 Asparaginase/glutaminase, active site 2 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 SUPERFAMILY SSF53774 4 329 1.83E-102 T 10-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 SMART SM00870 7 325 5.8E-137 T 10-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 PRINTS PR00139 Asparaginase/glutaminase family signature 87 105 4.3E-21 T 10-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 PRINTS PR00139 Asparaginase/glutaminase family signature 8 19 4.3E-21 T 10-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 PRINTS PR00139 Asparaginase/glutaminase family signature 267 285 4.3E-21 T 10-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 PIRSF PIRSF500176 4 331 7.9E-82 T 10-11-2016 CJM129_RS00140 59d33dfc1e2b06516cfe4b5a8288e777 331 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 6 331 1.1E-129 T 10-11-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CJM129_RS07510 66b22bfffc5f99ca169325e712b05ca4 108 SUPERFAMILY SSF81301 2 99 4.58E-25 T 10-11-2016 CJM129_RS07510 66b22bfffc5f99ca169325e712b05ca4 108 PANTHER PTHR21043 5 99 5.8E-18 T 10-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CJM129_RS07510 66b22bfffc5f99ca169325e712b05ca4 108 Pfam PF02410 Ribosomal silencing factor during starvation 8 99 1.2E-21 T 10-11-2016 CJM129_RS07510 66b22bfffc5f99ca169325e712b05ca4 108 Gene3D G3DSA:3.30.460.10 2 100 1.2E-26 T 10-11-2016 CJM129_RS07510 66b22bfffc5f99ca169325e712b05ca4 108 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 5 99 1.6E-27 T 10-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CJM129_RS07510 66b22bfffc5f99ca169325e712b05ca4 108 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 101 19.293 T 10-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.7E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 1.7E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.7E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.7E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.7E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 1.7E-18 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PANTHER PTHR24322:SF328 9 142 7.8E-17 T 10-11-2016 CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 Gene3D G3DSA:3.40.50.720 2 254 2.0E-45 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PANTHER PTHR24322 9 142 7.8E-17 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 SUPERFAMILY SSF51735 3 254 1.04E-48 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.6E-5 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 6.6E-5 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 6.6E-5 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PANTHER PTHR24322 168 199 7.8E-17 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 6.1E-33 T 10-11-2016 CJM129_RS07150 6dd263783d54613b90ff66236644d733 256 PANTHER PTHR24322:SF328 168 199 7.8E-17 T 10-11-2016 CJM129_RS08415 949c7a100e7ddc1811500724b79287e6 37 PANTHER PTHR18804 1 37 3.4E-18 T 10-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08415 949c7a100e7ddc1811500724b79287e6 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 10-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08415 949c7a100e7ddc1811500724b79287e6 37 SUPERFAMILY SSF57840 1 37 8.11E-17 T 10-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08415 949c7a100e7ddc1811500724b79287e6 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.9E-23 T 10-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08415 949c7a100e7ddc1811500724b79287e6 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.727 T 10-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08415 949c7a100e7ddc1811500724b79287e6 37 Pfam PF00444 Ribosomal protein L36 1 37 1.4E-20 T 10-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00280 53aa8ac9b600912c79eda6ce5c71e8a4 201 PANTHER PTHR31223 1 200 2.3E-56 T 10-11-2016 CJM129_RS00280 53aa8ac9b600912c79eda6ce5c71e8a4 201 SUPERFAMILY SSF102405 19 199 4.27E-44 T 10-11-2016 CJM129_RS00280 53aa8ac9b600912c79eda6ce5c71e8a4 201 Pfam PF03641 Possible lysine decarboxylase 63 192 2.8E-26 T 10-11-2016 IPR031100 LOG family CJM129_RS00280 53aa8ac9b600912c79eda6ce5c71e8a4 201 Gene3D G3DSA:3.40.50.450 10 200 2.2E-54 T 10-11-2016 CJM129_RS00280 53aa8ac9b600912c79eda6ce5c71e8a4 201 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 21 198 2.1E-30 T 10-11-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CJM129_RS00280 53aa8ac9b600912c79eda6ce5c71e8a4 201 PANTHER PTHR31223:SF1 1 200 2.3E-56 T 10-11-2016 CJM129_RS03100 825550369254aeaf7530a319df23126e 286 Pfam PF01513 ATP-NAD kinase 66 268 1.0E-42 T 10-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CJM129_RS03100 825550369254aeaf7530a319df23126e 286 PANTHER PTHR20275 41 285 9.1E-68 T 10-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CJM129_RS03100 825550369254aeaf7530a319df23126e 286 SUPERFAMILY SSF111331 27 285 6.54E-76 T 10-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain CJM129_RS03100 825550369254aeaf7530a319df23126e 286 Gene3D G3DSA:3.40.50.10330 8 151 4.2E-27 T 10-11-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CJM129_RS03100 825550369254aeaf7530a319df23126e 286 Gene3D G3DSA:2.60.200.30 152 257 3.2E-39 T 10-11-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CJM129_RS03100 825550369254aeaf7530a319df23126e 286 Hamap MF_00361 NAD kinase [nadK]. 11 284 28.515 T 10-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 CJM129_RS02305 2478f270d755fcb3abb3c0967b085705 52 Pfam PF00471 Ribosomal protein L33 3 49 5.0E-22 T 10-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02305 2478f270d755fcb3abb3c0967b085705 52 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 10-11-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02305 2478f270d755fcb3abb3c0967b085705 52 SUPERFAMILY SSF57829 1 49 4.33E-19 T 10-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CJM129_RS02305 2478f270d755fcb3abb3c0967b085705 52 PANTHER PTHR15238:SF3 1 52 2.2E-22 T 10-11-2016 CJM129_RS02305 2478f270d755fcb3abb3c0967b085705 52 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 2.5E-22 T 10-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02305 2478f270d755fcb3abb3c0967b085705 52 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.765 T 10-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02305 2478f270d755fcb3abb3c0967b085705 52 PANTHER PTHR15238 1 52 2.2E-22 T 10-11-2016 CJM129_RS00910 176d827d864820985b8b27bd18ce7d0d 136 PANTHER PTHR30558:SF9 10 130 6.0E-37 T 10-11-2016 CJM129_RS00910 176d827d864820985b8b27bd18ce7d0d 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 132 1.7E-30 T 10-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CJM129_RS00910 176d827d864820985b8b27bd18ce7d0d 136 PANTHER PTHR30558 10 130 6.0E-37 T 10-11-2016 CJM129_RS03245 0ad96e654613496e94eca1f8e4a52c7e 474 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 16 404 2.7E-142 T 10-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CJM129_RS03245 0ad96e654613496e94eca1f8e4a52c7e 474 PIRSF PIRSF004539 11 472 7.3E-197 T 10-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CJM129_RS03245 0ad96e654613496e94eca1f8e4a52c7e 474 PANTHER PTHR36106 13 474 1.1E-252 T 10-11-2016 CJM129_RS03245 0ad96e654613496e94eca1f8e4a52c7e 474 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 16 469 9.0E-166 T 10-11-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CJM129_RS03245 0ad96e654613496e94eca1f8e4a52c7e 474 PANTHER PTHR36106:SF3 13 474 1.1E-252 T 10-11-2016 CJM129_RS05615 635d7b37df33cbedc6334715f06a3b80 125 SUPERFAMILY SSF54995 1 99 5.62E-33 T 10-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS05615 635d7b37df33cbedc6334715f06a3b80 125 PANTHER PTHR21011 1 97 5.1E-28 T 10-11-2016 CJM129_RS05615 635d7b37df33cbedc6334715f06a3b80 125 Gene3D G3DSA:3.30.70.60 1 99 4.8E-34 T 10-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CJM129_RS05615 635d7b37df33cbedc6334715f06a3b80 125 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 21.918 T 10-11-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS05615 635d7b37df33cbedc6334715f06a3b80 125 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 5.5E-32 T 10-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS05615 635d7b37df33cbedc6334715f06a3b80 125 Pfam PF01250 Ribosomal protein S6 3 92 4.4E-29 T 10-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS03735 0ddafbfab939c3363ab865108e8aafb7 256 SUPERFAMILY SSF53850 23 256 6.83E-79 T 10-11-2016 CJM129_RS03735 0ddafbfab939c3363ab865108e8aafb7 256 PIRSF PIRSF002854 3 256 1.4E-89 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS03735 0ddafbfab939c3363ab865108e8aafb7 256 Gene3D G3DSA:3.40.190.10 21 149 1.6E-49 T 10-11-2016 CJM129_RS03735 0ddafbfab939c3363ab865108e8aafb7 256 Pfam PF03180 NLPA lipoprotein 23 256 7.2E-86 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS03735 0ddafbfab939c3363ab865108e8aafb7 256 PANTHER PTHR30429 20 256 1.1E-104 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS09095 c12ca3d5cae7657c0b1be1a672656a65 191 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 188 2.2E-52 T 10-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09095 c12ca3d5cae7657c0b1be1a672656a65 191 Pfam PF00297 Ribosomal protein L3 91 160 6.5E-10 T 10-11-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09095 c12ca3d5cae7657c0b1be1a672656a65 191 Gene3D G3DSA:4.10.960.10 86 149 2.0E-22 T 10-11-2016 CJM129_RS09095 c12ca3d5cae7657c0b1be1a672656a65 191 SUPERFAMILY SSF50447 3 188 1.59E-45 T 10-11-2016 IPR009000 Translation protein, beta-barrel domain CJM129_RS09095 c12ca3d5cae7657c0b1be1a672656a65 191 PANTHER PTHR11229 95 191 5.6E-40 T 10-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS01265 e99e3786565f7fd64706ff21011c0eb8 237 SUPERFAMILY SSF53335 2 162 2.86E-22 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01265 e99e3786565f7fd64706ff21011c0eb8 237 PANTHER PTHR10108 2 112 2.8E-13 T 10-11-2016 CJM129_RS01265 e99e3786565f7fd64706ff21011c0eb8 237 Pfam PF13649 Methyltransferase domain 41 128 2.8E-12 T 10-11-2016 CJM129_RS01265 e99e3786565f7fd64706ff21011c0eb8 237 PANTHER PTHR10108:SF730 2 112 2.8E-13 T 10-11-2016 CJM129_RS01265 e99e3786565f7fd64706ff21011c0eb8 237 Gene3D G3DSA:3.40.50.150 27 132 6.0E-19 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01355 4b48efdff0a3508f725fbb1dac232e95 173 SUPERFAMILY SSF50341 27 171 1.31E-35 T 10-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJM129_RS01355 4b48efdff0a3508f725fbb1dac232e95 173 PANTHER PTHR22617 1 172 2.1E-30 T 10-11-2016 CJM129_RS01355 4b48efdff0a3508f725fbb1dac232e95 173 SMART SM00260 27 169 1.0E-34 T 10-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJM129_RS01355 4b48efdff0a3508f725fbb1dac232e95 173 Pfam PF01584 CheW-like domain 31 171 7.6E-34 T 10-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJM129_RS01355 4b48efdff0a3508f725fbb1dac232e95 173 PANTHER PTHR22617:SF33 1 172 2.1E-30 T 10-11-2016 CJM129_RS01355 4b48efdff0a3508f725fbb1dac232e95 173 Gene3D G3DSA:2.40.50.180 67 107 1.2E-6 T 10-11-2016 CJM129_RS08475 9627536f03fdf60674194c33f5c7b4d1 255 SUPERFAMILY SSF51366 1 254 5.34E-73 T 10-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJM129_RS08475 9627536f03fdf60674194c33f5c7b4d1 255 PANTHER PTHR21235 1 255 1.4E-102 T 10-11-2016 CJM129_RS08475 9627536f03fdf60674194c33f5c7b4d1 255 PANTHER PTHR21235:SF2 1 255 1.4E-102 T 10-11-2016 CJM129_RS08475 9627536f03fdf60674194c33f5c7b4d1 255 Pfam PF00977 Histidine biosynthesis protein 5 237 1.9E-77 T 10-11-2016 IPR006062 Histidine biosynthesis GO:0000105 CJM129_RS08475 9627536f03fdf60674194c33f5c7b4d1 255 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 254 43.79 T 10-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CJM129_RS08475 9627536f03fdf60674194c33f5c7b4d1 255 Gene3D G3DSA:3.20.20.70 4 254 2.4E-85 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS08475 9627536f03fdf60674194c33f5c7b4d1 255 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 254 5.9E-102 T 10-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 Pfam PF00333 Ribosomal protein S5, N-terminal domain 9 72 1.9E-28 T 10-11-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 SUPERFAMILY SSF54768 5 73 2.62E-23 T 10-11-2016 CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 ProSitePatterns PS00585 Ribosomal protein S5 signature. 26 58 - T 10-11-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 SUPERFAMILY SSF54211 77 145 1.29E-22 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 PANTHER PTHR13718 7 146 9.6E-62 T 10-11-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 147 30.909 T 10-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 Gene3D G3DSA:3.30.230.10 74 145 2.5E-29 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 Pfam PF03719 Ribosomal protein S5, C-terminal domain 85 146 1.2E-25 T 10-11-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 7 146 1.2E-63 T 10-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJM129_RS09010 8fade86707adac6d7be181ed72be55a7 147 Gene3D G3DSA:3.30.160.20 7 70 8.8E-30 T 10-11-2016 IPR014720 Double-stranded RNA-binding domain CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 PANTHER PTHR11070 8 69 2.6E-62 T 10-11-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 PANTHER PTHR11070 96 195 2.6E-62 T 10-11-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 PANTHER PTHR11070:SF24 8 69 2.6E-62 T 10-11-2016 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 PANTHER PTHR11070:SF24 96 195 2.6E-62 T 10-11-2016 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 SUPERFAMILY SSF52540 5 60 1.28E-81 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 SUPERFAMILY SSF52540 96 175 1.28E-81 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 SUPERFAMILY SSF52540 278 646 1.28E-81 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 SUPERFAMILY SSF52540 688 726 1.28E-81 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 PANTHER PTHR11070:SF24 261 657 2.6E-62 T 10-11-2016 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 397 3.2E-45 T 10-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 PANTHER PTHR11070 687 714 2.6E-62 T 10-11-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 Gene3D G3DSA:3.40.50.300 284 400 8.5E-51 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 Gene3D G3DSA:3.40.50.300 8 56 8.5E-51 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 Gene3D G3DSA:3.40.50.300 104 163 8.5E-51 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 PANTHER PTHR11070:SF24 687 714 2.6E-62 T 10-11-2016 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 Pfam PF13361 UvrD-like helicase C-terminal domain 611 712 1.8E-12 T 10-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 Pfam PF13361 UvrD-like helicase C-terminal domain 405 535 7.1E-10 T 10-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 Gene3D G3DSA:3.40.50.300 608 725 2.9E-36 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 Gene3D G3DSA:3.40.50.300 407 512 2.9E-36 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07880 deb76a047d0c83ecbf6840dfd8569057 921 PANTHER PTHR11070 261 657 2.6E-62 T 10-11-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CJM129_RS08360 bac79765bac13a8d687526ded3fc4e2b 221 PANTHER PTHR24220 3 206 1.5E-58 T 10-11-2016 CJM129_RS08360 bac79765bac13a8d687526ded3fc4e2b 221 Gene3D G3DSA:3.40.50.300 1 210 3.8E-53 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08360 bac79765bac13a8d687526ded3fc4e2b 221 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS08360 bac79765bac13a8d687526ded3fc4e2b 221 SMART SM00382 36 220 2.9E-6 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS08360 bac79765bac13a8d687526ded3fc4e2b 221 SUPERFAMILY SSF52540 10 216 1.04E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08360 bac79765bac13a8d687526ded3fc4e2b 221 Pfam PF00005 ABC transporter 28 176 4.7E-30 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS03140 eaadf9be5d9483c8a55d2d5ac78228aa 153 Pfam PF03968 OstA-like protein 22 131 7.0E-21 T 10-11-2016 IPR005653 Organic solvent tolerance-like, N-terminal CJM129_RS03140 eaadf9be5d9483c8a55d2d5ac78228aa 153 Gene3D G3DSA:2.60.450.10 20 147 2.6E-20 T 10-11-2016 CJM129_RS07370 d6abbd977427693e6396e9a02de5d1dc 189 Pfam PF05494 MlaC protein 29 184 2.2E-35 T 10-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CJM129_RS07370 d6abbd977427693e6396e9a02de5d1dc 189 PANTHER PTHR36573 1 189 1.4E-18 T 10-11-2016 CJM129_RS07370 d6abbd977427693e6396e9a02de5d1dc 189 Gene3D G3DSA:3.10.450.50 27 61 1.9E-7 T 10-11-2016 IPR032710 NTF2-like domain CJM129_RS07370 d6abbd977427693e6396e9a02de5d1dc 189 Gene3D G3DSA:3.10.450.50 105 158 1.9E-7 T 10-11-2016 IPR032710 NTF2-like domain CJM129_RS07370 d6abbd977427693e6396e9a02de5d1dc 189 Gene3D G3DSA:1.10.10.640 159 184 1.4E-15 T 10-11-2016 IPR023094 Toluene tolerance protein, alpha-helical CJM129_RS07370 d6abbd977427693e6396e9a02de5d1dc 189 Gene3D G3DSA:1.10.10.640 62 102 1.4E-15 T 10-11-2016 IPR023094 Toluene tolerance protein, alpha-helical CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 423 3.8E-147 T 10-11-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 SUPERFAMILY SSF47364 2 83 5.98E-11 T 10-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 SMART SM00962 95 290 1.7E-101 T 10-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 Gene3D G3DSA:1.20.120.140 2 79 8.4E-8 T 10-11-2016 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 PANTHER PTHR11564:SF7 1 429 5.4E-161 T 10-11-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 SUPERFAMILY SSF52540 89 292 1.61E-48 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 Pfam PF02978 Signal peptide binding domain 321 420 2.0E-29 T 10-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 SUPERFAMILY SSF47446 292 425 4.45E-42 T 10-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 263 276 - T 10-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 Pfam PF02881 SRP54-type protein, helical bundle domain 6 70 2.5E-8 T 10-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 Gene3D G3DSA:3.40.50.300 90 290 5.7E-70 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 Gene3D G3DSA:1.10.260.30 322 425 4.2E-34 T 10-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 SMART SM00963 1 79 5.1E-8 T 10-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 PANTHER PTHR11564 1 429 5.4E-161 T 10-11-2016 CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 SMART SM00382 94 300 1.0E-6 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS03425 9582e7a4b58691ee1470630f2212ec9a 445 Pfam PF00448 SRP54-type protein, GTPase domain 95 289 3.7E-70 T 10-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 CJM129_RS03045 d0a718e9a1af0bb9b4511aff9face526 321 SUPERFAMILY SSF52540 4 191 1.27E-16 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03045 d0a718e9a1af0bb9b4511aff9face526 321 Gene3D G3DSA:3.40.50.300 2 120 1.8E-6 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00095 fdcb050577a1661ce2e03b0ba1387ac8 304 PANTHER PTHR30600:SF7 11 301 1.3E-101 T 10-11-2016 CJM129_RS00095 fdcb050577a1661ce2e03b0ba1387ac8 304 SUPERFAMILY SSF46626 167 302 3.21E-37 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS00095 fdcb050577a1661ce2e03b0ba1387ac8 304 PIRSF PIRSF000294 9 303 1.9E-99 T 10-11-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 CJM129_RS00095 fdcb050577a1661ce2e03b0ba1387ac8 304 Gene3D G3DSA:1.10.760.10 172 301 2.0E-44 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS00095 fdcb050577a1661ce2e03b0ba1387ac8 304 Gene3D G3DSA:1.10.760.10 24 171 1.2E-46 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS00095 fdcb050577a1661ce2e03b0ba1387ac8 304 Pfam PF03150 Di-haem cytochrome c peroxidase 34 180 3.7E-47 T 10-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CJM129_RS00095 fdcb050577a1661ce2e03b0ba1387ac8 304 Pfam PF00034 Cytochrome c 187 297 1.5E-6 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS00095 fdcb050577a1661ce2e03b0ba1387ac8 304 PANTHER PTHR30600 11 301 1.3E-101 T 10-11-2016 CJM129_RS00095 fdcb050577a1661ce2e03b0ba1387ac8 304 SUPERFAMILY SSF46626 14 168 2.69E-45 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 Pfam PF07650 KH domain 201 277 1.2E-14 T 10-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 Gene3D G3DSA:3.30.300.20 182 285 1.2E-28 T 10-11-2016 IPR015946 K homology domain-like, alpha/beta CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 150 1.7E-22 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 SUPERFAMILY SSF54814 175 286 5.04E-29 T 10-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 TIGRFAM TIGR00436 era: GTP-binding protein Era 4 270 6.8E-64 T 10-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 SUPERFAMILY SSF52540 6 174 1.03E-33 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 PANTHER PTHR11649 2 286 2.8E-72 T 10-11-2016 CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 Gene3D G3DSA:3.40.50.300 4 167 7.1E-36 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 PANTHER PTHR11649:SF3 2 286 2.8E-72 T 10-11-2016 CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 Hamap MF_00367 GTPase Era [era]. 1 288 29.248 T 10-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 CJM129_RS03200 176f5d9ee0bb91ba7c4f84fd5501ed51 291 Pfam PF01926 50S ribosome-binding GTPase 6 102 3.9E-20 T 10-11-2016 IPR006073 GTP binding domain GO:0005525 CJM129_RS03445 fedfbd7462c407e34350dfee5916fcfa 234 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 232 1.7E-80 T 10-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CJM129_RS03445 fedfbd7462c407e34350dfee5916fcfa 234 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 234 78.965 T 10-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CJM129_RS03445 fedfbd7462c407e34350dfee5916fcfa 234 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 224 5.9E-49 T 10-11-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CJM129_RS03445 fedfbd7462c407e34350dfee5916fcfa 234 Gene3D G3DSA:3.40.1280.10 1 159 5.5E-60 T 10-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJM129_RS03445 fedfbd7462c407e34350dfee5916fcfa 234 SUPERFAMILY SSF75217 1 231 7.85E-82 T 10-11-2016 IPR029028 Alpha/beta knot methyltransferases CJM129_RS03445 fedfbd7462c407e34350dfee5916fcfa 234 PANTHER PTHR32125 1 231 4.6E-68 T 10-11-2016 CJM129_RS03445 fedfbd7462c407e34350dfee5916fcfa 234 PANTHER PTHR32125:SF1 1 231 4.6E-68 T 10-11-2016 CJM129_RS03445 fedfbd7462c407e34350dfee5916fcfa 234 Gene3D G3DSA:1.10.1270.20 160 231 7.6E-16 T 10-11-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CJM129_RS03445 fedfbd7462c407e34350dfee5916fcfa 234 PIRSF PIRSF000386 1 234 8.3E-81 T 10-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CJM129_RS07715 64772788657c19931ffb428de10942f7 220 PANTHER PTHR24220 3 219 7.7E-58 T 10-11-2016 CJM129_RS07715 64772788657c19931ffb428de10942f7 220 Gene3D G3DSA:3.40.50.300 1 211 9.7E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07715 64772788657c19931ffb428de10942f7 220 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS07715 64772788657c19931ffb428de10942f7 220 SUPERFAMILY SSF52540 2 211 1.27E-39 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07715 64772788657c19931ffb428de10942f7 220 SMART SM00382 31 202 2.3E-4 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS07715 64772788657c19931ffb428de10942f7 220 PANTHER PTHR24220:SF117 3 219 7.7E-58 T 10-11-2016 CJM129_RS07715 64772788657c19931ffb428de10942f7 220 Pfam PF00005 ABC transporter 23 153 1.0E-13 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS00400 caeb42e204a03e95792d8cdc79971aef 189 SUPERFAMILY SSF50370 20 188 1.11E-41 T 10-11-2016 IPR000772 Ricin B, lectin domain CJM129_RS00400 caeb42e204a03e95792d8cdc79971aef 189 Pfam PF03498 Cytolethal distending toxin A/C domain 29 187 1.1E-49 T 10-11-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 CJM129_RS00400 caeb42e204a03e95792d8cdc79971aef 189 Gene3D G3DSA:2.80.10.50 22 188 2.4E-27 T 10-11-2016 CJM129_RS05500 94a905d756312b6183c952d28da26ff8 63 Pfam PF02597 ThiS family 20 63 2.3E-7 T 10-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CJM129_RS05500 94a905d756312b6183c952d28da26ff8 63 PANTHER PTHR34472 1 63 1.4E-14 T 10-11-2016 CJM129_RS05500 94a905d756312b6183c952d28da26ff8 63 Gene3D G3DSA:3.10.20.30 1 63 2.8E-20 T 10-11-2016 IPR012675 Beta-grasp domain CJM129_RS05500 94a905d756312b6183c952d28da26ff8 63 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 1 63 3.6E-20 T 10-11-2016 IPR010035 ThiS, thiamine-biosynthesis CJM129_RS05500 94a905d756312b6183c952d28da26ff8 63 SUPERFAMILY SSF54285 1 62 3.18E-15 T 10-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CJM129_RS05500 94a905d756312b6183c952d28da26ff8 63 PANTHER PTHR34472:SF1 1 63 1.4E-14 T 10-11-2016 CJM129_RS05595 84c64fee46d9903f00de642e75c1d7b2 201 Pfam PF00881 Nitroreductase family 10 180 5.6E-29 T 10-11-2016 IPR029479 Nitroreductase CJM129_RS05595 84c64fee46d9903f00de642e75c1d7b2 201 PANTHER PTHR23026:SF101 5 201 6.7E-37 T 10-11-2016 CJM129_RS05595 84c64fee46d9903f00de642e75c1d7b2 201 SUPERFAMILY SSF55469 4 199 1.96E-49 T 10-11-2016 IPR000415 Nitroreductase-like GO:0016491 CJM129_RS05595 84c64fee46d9903f00de642e75c1d7b2 201 PANTHER PTHR23026 5 201 6.7E-37 T 10-11-2016 CJM129_RS05595 84c64fee46d9903f00de642e75c1d7b2 201 Gene3D G3DSA:3.40.109.10 3 200 2.1E-55 T 10-11-2016 IPR000415 Nitroreductase-like GO:0016491 CJM129_RS06165 26ed3fabfa064c656abd5aa346e9908c 387 PANTHER PTHR10108 102 288 1.1E-119 T 10-11-2016 CJM129_RS06165 26ed3fabfa064c656abd5aa346e9908c 387 PANTHER PTHR10108 305 387 1.1E-119 T 10-11-2016 CJM129_RS06165 26ed3fabfa064c656abd5aa346e9908c 387 Gene3D G3DSA:3.40.50.150 103 372 3.7E-98 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06165 26ed3fabfa064c656abd5aa346e9908c 387 SUPERFAMILY SSF53335 110 373 3.53E-84 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06165 26ed3fabfa064c656abd5aa346e9908c 387 PANTHER PTHR10108:SF743 102 288 1.1E-119 T 10-11-2016 CJM129_RS06165 26ed3fabfa064c656abd5aa346e9908c 387 PANTHER PTHR10108:SF743 305 387 1.1E-119 T 10-11-2016 CJM129_RS06165 26ed3fabfa064c656abd5aa346e9908c 387 PIRSF PIRSF003085 1 387 3.6E-138 T 10-11-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CJM129_RS06165 26ed3fabfa064c656abd5aa346e9908c 387 Pfam PF02353 Mycolic acid cyclopropane synthetase 102 368 2.4E-110 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 TIGRFAM TIGR00761 argB: acetylglutamate kinase 26 255 1.3E-74 T 10-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 Hamap MF_00082_B Acetylglutamate kinase [argB]. 22 279 31.968 T 10-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 Gene3D G3DSA:3.40.1160.10 23 278 1.7E-94 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 PIRSF PIRSF000728 9 279 2.5E-106 T 10-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 1.1E-7 T 10-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 PRINTS PR00474 Glutamate 5-kinase family signature 179 206 1.1E-7 T 10-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 PRINTS PR00474 Glutamate 5-kinase family signature 230 250 1.1E-7 T 10-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 PANTHER PTHR23342 1 278 2.4E-103 T 10-11-2016 CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 Pfam PF00696 Amino acid kinase family 24 256 6.0E-43 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS01095 79367fb281d965fc7b5bfe11ab699327 279 SUPERFAMILY SSF53633 2 278 1.57E-79 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 Gene3D G3DSA:3.40.605.10 518 748 2.5E-42 T 10-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 733 740 - T 10-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 Pfam PF01619 Proline dehydrogenase 125 417 4.7E-62 T 10-11-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 Gene3D G3DSA:3.40.309.10 749 939 4.7E-42 T 10-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 PIRSF PIRSF000197 1 1162 0.0 T 10-11-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 Gene3D G3DSA:3.20.20.220 125 460 4.1E-65 T 10-11-2016 IPR029041 FAD-linked oxidoreductase-like CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 PANTHER PTHR11699 482 990 9.0E-93 T 10-11-2016 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 761 772 - T 10-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 PANTHER PTHR11699:SF18 482 990 9.0E-93 T 10-11-2016 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 Pfam PF00171 Aldehyde dehydrogenase family 518 960 6.2E-103 T 10-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 SUPERFAMILY SSF51730 130 459 5.1E-69 T 10-11-2016 IPR029041 FAD-linked oxidoreductase-like CJM129_RS07990 5b3a22c20bcde6f0e1852aba9497028a 1162 SUPERFAMILY SSF53720 470 960 1.23E-93 T 10-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJM129_RS01030 559e7682603a210338ecf5bebfec8c1e 664 Pfam PF03169 OPT oligopeptide transporter protein 9 615 6.5E-106 T 10-11-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CJM129_RS01030 559e7682603a210338ecf5bebfec8c1e 664 PANTHER PTHR31645 1 643 9.0E-139 T 10-11-2016 CJM129_RS01030 559e7682603a210338ecf5bebfec8c1e 664 PANTHER PTHR31645:SF0 1 643 9.0E-139 T 10-11-2016 CJM129_RS01030 559e7682603a210338ecf5bebfec8c1e 664 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 9 617 6.3E-204 T 10-11-2016 IPR004814 Oligopeptide transporter OPT CJM129_RS01030 559e7682603a210338ecf5bebfec8c1e 664 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 5 619 1.0E-109 T 10-11-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CJM129_RS00070 cd734636038b98bf510a7f06af93e4ea 408 Gene3D G3DSA:1.10.3210.10 178 284 6.3E-55 T 10-11-2016 IPR006674 HD domain CJM129_RS00070 cd734636038b98bf510a7f06af93e4ea 408 Gene3D G3DSA:1.10.3210.10 337 407 6.3E-55 T 10-11-2016 IPR006674 HD domain CJM129_RS00070 cd734636038b98bf510a7f06af93e4ea 408 SUPERFAMILY SSF109604 4 167 7.53E-6 T 10-11-2016 CJM129_RS00070 cd734636038b98bf510a7f06af93e4ea 408 SUPERFAMILY SSF109604 180 289 1.33E-29 T 10-11-2016 CJM129_RS00070 cd734636038b98bf510a7f06af93e4ea 408 SUPERFAMILY SSF109604 338 406 1.33E-29 T 10-11-2016 CJM129_RS00070 cd734636038b98bf510a7f06af93e4ea 408 Pfam PF13023 HD domain 191 377 1.5E-42 T 10-11-2016 IPR006674 HD domain CJM129_RS00725 8ce7e7ad7c9d872babb72a908d906468 296 PANTHER PTHR30477 1 289 3.6E-65 T 10-11-2016 CJM129_RS00725 8ce7e7ad7c9d872babb72a908d906468 296 SUPERFAMILY SSF53807 34 295 2.4E-76 T 10-11-2016 CJM129_RS00725 8ce7e7ad7c9d872babb72a908d906468 296 PANTHER PTHR30477:SF1 1 289 3.6E-65 T 10-11-2016 CJM129_RS00725 8ce7e7ad7c9d872babb72a908d906468 296 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 276 1.4E-55 T 10-11-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CJM129_RS00725 8ce7e7ad7c9d872babb72a908d906468 296 Gene3D G3DSA:3.40.50.1980 196 295 6.9E-28 T 10-11-2016 CJM129_RS00725 8ce7e7ad7c9d872babb72a908d906468 296 Gene3D G3DSA:3.40.50.1980 33 195 8.3E-47 T 10-11-2016 CJM129_RS03675 11c05f1ac646178a0c191eccef1d3b70 971 Pfam PF04851 Type III restriction enzyme, res subunit 272 462 2.5E-16 T 10-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CJM129_RS03675 11c05f1ac646178a0c191eccef1d3b70 971 Gene3D G3DSA:3.40.50.300 260 465 3.6E-18 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03675 11c05f1ac646178a0c191eccef1d3b70 971 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 200 7.7E-15 T 10-11-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CJM129_RS03675 11c05f1ac646178a0c191eccef1d3b70 971 SUPERFAMILY SSF52540 239 512 1.27E-27 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03675 11c05f1ac646178a0c191eccef1d3b70 971 PANTHER PTHR30195:SF13 1 414 3.2E-222 T 10-11-2016 CJM129_RS03675 11c05f1ac646178a0c191eccef1d3b70 971 PANTHER PTHR30195 440 915 3.2E-222 T 10-11-2016 CJM129_RS03675 11c05f1ac646178a0c191eccef1d3b70 971 PANTHER PTHR30195 1 414 3.2E-222 T 10-11-2016 CJM129_RS03675 11c05f1ac646178a0c191eccef1d3b70 971 SMART SM00487 268 485 1.3E-16 T 10-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJM129_RS03675 11c05f1ac646178a0c191eccef1d3b70 971 PANTHER PTHR30195:SF13 440 915 3.2E-222 T 10-11-2016 CJM129_RS06340 a768fabdb2f5723dc51120315d631c51 203 Gene3D G3DSA:2.40.30.20 95 184 2.4E-27 T 10-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS06340 a768fabdb2f5723dc51120315d631c51 203 Gene3D G3DSA:2.40.30.20 5 94 2.3E-17 T 10-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS06340 a768fabdb2f5723dc51120315d631c51 203 SUPERFAMILY SSF63380 1 83 4.25E-14 T 10-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CJM129_RS06340 a768fabdb2f5723dc51120315d631c51 203 PIRSF PIRSF000498 1 199 6.2E-64 T 10-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS06340 a768fabdb2f5723dc51120315d631c51 203 PANTHER PTHR21098 1 185 1.8E-53 T 10-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS06340 a768fabdb2f5723dc51120315d631c51 203 SUPERFAMILY SSF63380 83 186 2.72E-28 T 10-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CJM129_RS06340 a768fabdb2f5723dc51120315d631c51 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 188 7.2E-56 T 10-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS06340 a768fabdb2f5723dc51120315d631c51 203 Pfam PF00677 Lumazine binding domain 90 174 2.7E-17 T 10-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS06340 a768fabdb2f5723dc51120315d631c51 203 Pfam PF00677 Lumazine binding domain 4 75 1.1E-10 T 10-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 CJM129_RS04015 5a7188a9a4a62b3e950fd96d4c277873 357 Gene3D G3DSA:3.40.50.150 145 355 5.5E-37 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS04015 5a7188a9a4a62b3e950fd96d4c277873 357 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 356 4.8E-159 T 10-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CJM129_RS04015 5a7188a9a4a62b3e950fd96d4c277873 357 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 356 1.4E-158 T 10-11-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CJM129_RS04015 5a7188a9a4a62b3e950fd96d4c277873 357 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 357 36.868 T 10-11-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CJM129_RS04015 5a7188a9a4a62b3e950fd96d4c277873 357 SUPERFAMILY SSF53335 11 356 2.39E-43 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS04015 5a7188a9a4a62b3e950fd96d4c277873 357 PANTHER PTHR11061:SF25 12 356 1.3E-85 T 10-11-2016 CJM129_RS04015 5a7188a9a4a62b3e950fd96d4c277873 357 PANTHER PTHR11061 12 356 1.3E-85 T 10-11-2016 CJM129_RS04015 5a7188a9a4a62b3e950fd96d4c277873 357 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 290 319 - T 10-11-2016 IPR030390 RNA methyltransferase TrmA, active site CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 Hamap MF_01393 ATP synthase subunit a [atpB]. 13 223 14.992 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 Pfam PF00119 ATP synthase A chain 25 216 1.7E-51 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 ProSitePatterns PS00449 ATP synthase a subunit signature. 162 171 - T 10-11-2016 IPR023011 ATPase, F0 complex, subunit A, active site CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 PANTHER PTHR11410:SF7 26 226 2.3E-62 T 10-11-2016 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 16 217 5.5E-43 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 SUPERFAMILY SSF81336 71 216 6.41E-37 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 PRINTS PR00123 ATP synthase A subunit signature 139 154 1.5E-14 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 PRINTS PR00123 ATP synthase A subunit signature 159 181 1.5E-14 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 PRINTS PR00123 ATP synthase A subunit signature 203 218 1.5E-14 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 PRINTS PR00123 ATP synthase A subunit signature 79 95 1.5E-14 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 Gene3D G3DSA:1.20.120.220 71 219 6.8E-42 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS06270 43a5f42a374b176fbfc5fd592186c129 226 PANTHER PTHR11410 26 226 2.3E-62 T 10-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 CJM129_RS08620 42e9bb4922daaaaab1b539b953089fd0 141 Pfam PF01618 MotA/TolQ/ExbB proton channel family 45 135 7.1E-27 T 10-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CJM129_RS08620 42e9bb4922daaaaab1b539b953089fd0 141 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 2 139 5.5E-73 T 10-11-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 CJM129_RS08620 42e9bb4922daaaaab1b539b953089fd0 141 PANTHER PTHR30625 8 137 8.5E-26 T 10-11-2016 CJM129_RS03480 b120d5b72b9379c1549fa27273834611 249 Pfam PF00669 Bacterial flagellin N-terminal helical region 8 135 3.7E-13 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS03480 b120d5b72b9379c1549fa27273834611 249 SUPERFAMILY SSF64518 9 242 1.44E-21 T 10-11-2016 CJM129_RS03480 b120d5b72b9379c1549fa27273834611 249 Gene3D G3DSA:1.20.1330.10 49 204 3.4E-15 T 10-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 ProSitePatterns PS00769 Transthyretin signature 2. 120 132 - T 10-11-2016 IPR023419 Transthyretin, conserved site CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 PANTHER PTHR10395:SF7 25 137 1.0E-40 T 10-11-2016 CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 SUPERFAMILY SSF49472 23 137 9.55E-40 T 10-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 Gene3D G3DSA:2.60.40.180 22 137 2.5E-40 T 10-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 PANTHER PTHR10395 25 137 1.0E-40 T 10-11-2016 CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 SMART SM00095 20 136 3.4E-6 T 10-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 ProSitePatterns PS00768 Transthyretin signature 1. 28 43 - T 10-11-2016 IPR023418 Transthyretin, thyroxine binding site CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 Pfam PF00576 HIUase/Transthyretin family 25 136 4.5E-37 T 10-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 24 137 8.5E-43 T 10-11-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 PRINTS PR00189 Transthyretin signature 24 44 1.1E-9 T 10-11-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 PRINTS PR00189 Transthyretin signature 115 137 1.1E-9 T 10-11-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase CJM129_RS03455 7dbb0e6974b0277682348c11a330195d 137 PRINTS PR00189 Transthyretin signature 57 82 1.1E-9 T 10-11-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase CJM129_RS02010 938b16fdc74e71abe8489e7d9611cec0 190 Pfam PF04264 YceI-like domain 24 187 4.7E-39 T 10-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJM129_RS02010 938b16fdc74e71abe8489e7d9611cec0 190 SUPERFAMILY SSF101874 21 189 3.66E-47 T 10-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJM129_RS02010 938b16fdc74e71abe8489e7d9611cec0 190 PANTHER PTHR34406 1 187 1.9E-46 T 10-11-2016 CJM129_RS02010 938b16fdc74e71abe8489e7d9611cec0 190 Gene3D G3DSA:2.40.128.110 23 189 3.5E-52 T 10-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJM129_RS02010 938b16fdc74e71abe8489e7d9611cec0 190 PANTHER PTHR34406:SF1 1 187 1.9E-46 T 10-11-2016 CJM129_RS02010 938b16fdc74e71abe8489e7d9611cec0 190 SMART SM00867 23 188 2.2E-53 T 10-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJM129_RS06650 f91b44f48ca5b64f1f956dbf043ab5c2 322 PANTHER PTHR11079:SF73 8 310 1.0E-72 T 10-11-2016 CJM129_RS06650 f91b44f48ca5b64f1f956dbf043ab5c2 322 Pfam PF01479 S4 domain 11 56 6.0E-9 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS06650 f91b44f48ca5b64f1f956dbf043ab5c2 322 Gene3D G3DSA:3.10.290.10 11 58 3.0E-14 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS06650 f91b44f48ca5b64f1f956dbf043ab5c2 322 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 296 1.5E-68 T 10-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS06650 f91b44f48ca5b64f1f956dbf043ab5c2 322 PANTHER PTHR11079 8 310 1.0E-72 T 10-11-2016 CJM129_RS06650 f91b44f48ca5b64f1f956dbf043ab5c2 322 Pfam PF00849 RNA pseudouridylate synthase 85 243 2.1E-25 T 10-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS06650 f91b44f48ca5b64f1f956dbf043ab5c2 322 SMART SM00363 10 67 1.1E-10 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS06650 f91b44f48ca5b64f1f956dbf043ab5c2 322 SUPERFAMILY SSF55120 73 295 3.68E-58 T 10-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS06650 f91b44f48ca5b64f1f956dbf043ab5c2 322 SUPERFAMILY SSF55174 9 107 2.36E-14 T 10-11-2016 CJM129_RS04670 96dca84a876ba55c15c9f34e826bbadc 159 SUPERFAMILY SSF55729 4 151 2.83E-26 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS04670 96dca84a876ba55c15c9f34e826bbadc 159 PANTHER PTHR10545 1 156 3.8E-38 T 10-11-2016 CJM129_RS04670 96dca84a876ba55c15c9f34e826bbadc 159 Gene3D G3DSA:3.40.630.30 1 157 4.9E-40 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS04670 96dca84a876ba55c15c9f34e826bbadc 159 Pfam PF00583 Acetyltransferase (GNAT) family 57 136 1.6E-11 T 10-11-2016 IPR000182 GNAT domain GO:0008080 CJM129_RS07260 f3edb35ed857c5b03132a58251c07bd0 251 PANTHER PTHR24220:SF471 3 250 8.7E-125 T 10-11-2016 CJM129_RS07260 f3edb35ed857c5b03132a58251c07bd0 251 SUPERFAMILY SSF52540 2 229 4.24E-58 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07260 f3edb35ed857c5b03132a58251c07bd0 251 Pfam PF00005 ABC transporter 18 164 2.8E-31 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS07260 f3edb35ed857c5b03132a58251c07bd0 251 Gene3D G3DSA:3.40.50.300 1 232 1.7E-61 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07260 f3edb35ed857c5b03132a58251c07bd0 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS07260 f3edb35ed857c5b03132a58251c07bd0 251 PANTHER PTHR24220 3 250 8.7E-125 T 10-11-2016 CJM129_RS07260 f3edb35ed857c5b03132a58251c07bd0 251 SMART SM00382 26 213 4.9E-10 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS05485 b2619c057f0d48e862cf0bb3e42cb706 381 Pfam PF04055 Radical SAM superfamily 93 205 3.1E-7 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS05485 b2619c057f0d48e862cf0bb3e42cb706 381 PANTHER PTHR22976:SF17 6 379 3.3E-138 T 10-11-2016 CJM129_RS05485 b2619c057f0d48e862cf0bb3e42cb706 381 SMART SM00876 268 372 2.7E-28 T 10-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CJM129_RS05485 b2619c057f0d48e862cf0bb3e42cb706 381 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 268 371 5.0E-24 T 10-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CJM129_RS05485 b2619c057f0d48e862cf0bb3e42cb706 381 PANTHER PTHR22976 6 379 3.3E-138 T 10-11-2016 CJM129_RS05485 b2619c057f0d48e862cf0bb3e42cb706 381 SUPERFAMILY SSF102114 47 369 5.36E-41 T 10-11-2016 CJM129_RS05485 b2619c057f0d48e862cf0bb3e42cb706 381 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 15 379 3.3E-165 T 10-11-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 CJM129_RS05485 b2619c057f0d48e862cf0bb3e42cb706 381 Gene3D G3DSA:3.20.20.70 48 371 4.5E-39 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 Gene3D G3DSA:3.90.105.10 124 155 5.9E-16 T 10-11-2016 CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 Gene3D G3DSA:3.40.980.10 156 316 1.7E-43 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 Pfam PF00994 Probable molybdopterin binding domain 175 309 2.7E-16 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 SUPERFAMILY SSF53218 170 311 1.96E-30 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 SUPERFAMILY SSF63882 2 168 1.15E-45 T 10-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 Pfam PF03453 MoeA N-terminal region (domain I and II) 4 161 2.3E-28 T 10-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 Gene3D G3DSA:2.170.190.11 46 123 1.8E-19 T 10-11-2016 CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 SMART SM00852 174 311 9.4E-28 T 10-11-2016 IPR001453 MoaB/Mog domain CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 PANTHER PTHR10192 2 395 5.3E-93 T 10-11-2016 CJM129_RS08070 54ed81ccbae44291363dd6fd5bfbb4eb 396 SUPERFAMILY SSF63867 320 395 9.55E-7 T 10-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS08995 a17948aaffa6a985cf0e95b139ed62a7 423 Pfam PF07690 Major Facilitator Superfamily 33 225 1.2E-20 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS08995 a17948aaffa6a985cf0e95b139ed62a7 423 Pfam PF07690 Major Facilitator Superfamily 247 419 3.0E-18 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS08995 a17948aaffa6a985cf0e95b139ed62a7 423 SUPERFAMILY SSF103473 29 420 4.19E-56 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS08995 a17948aaffa6a985cf0e95b139ed62a7 423 Gene3D G3DSA:1.20.1250.20 32 228 1.3E-22 T 10-11-2016 CJM129_RS08995 a17948aaffa6a985cf0e95b139ed62a7 423 Gene3D G3DSA:1.20.1250.20 241 420 1.6E-26 T 10-11-2016 CJM129_RS08995 a17948aaffa6a985cf0e95b139ed62a7 423 PANTHER PTHR23501 92 421 2.9E-30 T 10-11-2016 CJM129_RS08995 a17948aaffa6a985cf0e95b139ed62a7 423 PANTHER PTHR23501 30 75 2.9E-30 T 10-11-2016 CJM129_RS06115 d2f62a96240f7741f9d48321e6c38ca2 113 Pfam PF00893 Small Multidrug Resistance protein 11 98 3.4E-18 T 10-11-2016 IPR000390 Small multidrug resistance protein family GO:0016021 CJM129_RS06115 d2f62a96240f7741f9d48321e6c38ca2 113 SUPERFAMILY SSF103481 13 110 3.27E-16 T 10-11-2016 CJM129_RS06115 d2f62a96240f7741f9d48321e6c38ca2 113 PANTHER PTHR30561 8 113 1.0E-21 T 10-11-2016 CJM129_RS08970 053334ecadb44197777164d5675d6e0f 254 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 10-11-2016 IPR020583 Inositol monophosphatase, metal-binding site CJM129_RS08970 053334ecadb44197777164d5675d6e0f 254 Gene3D G3DSA:3.30.540.10 3 146 2.6E-36 T 10-11-2016 CJM129_RS08970 053334ecadb44197777164d5675d6e0f 254 SUPERFAMILY SSF56655 3 249 1.44E-54 T 10-11-2016 CJM129_RS08970 053334ecadb44197777164d5675d6e0f 254 Pfam PF00459 Inositol monophosphatase family 4 238 4.4E-36 T 10-11-2016 IPR000760 Inositol monophosphatase GO:0046854 CJM129_RS08970 053334ecadb44197777164d5675d6e0f 254 PANTHER PTHR20854:SF5 1 254 5.2E-44 T 10-11-2016 CJM129_RS08970 053334ecadb44197777164d5675d6e0f 254 Gene3D G3DSA:3.40.190.80 147 247 3.8E-22 T 10-11-2016 CJM129_RS08970 053334ecadb44197777164d5675d6e0f 254 PANTHER PTHR20854 1 254 5.2E-44 T 10-11-2016 IPR000760 Inositol monophosphatase GO:0046854 CJM129_RS01840 cce8b5fc5e76f5652ca06edc940abcb2 310 SUPERFAMILY SSF103481 43 142 2.35E-14 T 10-11-2016 CJM129_RS01840 cce8b5fc5e76f5652ca06edc940abcb2 310 PANTHER PTHR22911:SF6 5 201 2.8E-42 T 10-11-2016 CJM129_RS01840 cce8b5fc5e76f5652ca06edc940abcb2 310 PANTHER PTHR22911 5 201 2.8E-42 T 10-11-2016 CJM129_RS01840 cce8b5fc5e76f5652ca06edc940abcb2 310 PANTHER PTHR22911 219 307 2.8E-42 T 10-11-2016 CJM129_RS01840 cce8b5fc5e76f5652ca06edc940abcb2 310 PANTHER PTHR22911:SF6 219 307 2.8E-42 T 10-11-2016 CJM129_RS01840 cce8b5fc5e76f5652ca06edc940abcb2 310 SUPERFAMILY SSF103481 222 307 1.7E-5 T 10-11-2016 CJM129_RS01840 cce8b5fc5e76f5652ca06edc940abcb2 310 Pfam PF00892 EamA-like transporter family 9 138 9.0E-18 T 10-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CJM129_RS05120 d97925c92a26fca4e6f2d1184409bc2d 882 SUPERFAMILY SSF69255 446 559 4.97E-17 T 10-11-2016 CJM129_RS05120 d97925c92a26fca4e6f2d1184409bc2d 882 SUPERFAMILY SSF69279 20 233 2.72E-24 T 10-11-2016 CJM129_RS05120 d97925c92a26fca4e6f2d1184409bc2d 882 Gene3D G3DSA:2.40.50.230 462 559 9.8E-18 T 10-11-2016 IPR006531 Gp5 N-terminal CJM129_RS05120 d97925c92a26fca4e6f2d1184409bc2d 882 Gene3D G3DSA:3.55.50.10 149 234 1.0E-14 T 10-11-2016 CJM129_RS05120 d97925c92a26fca4e6f2d1184409bc2d 882 Pfam PF05954 Phage late control gene D protein (GPD) 73 358 1.6E-17 T 10-11-2016 CJM129_RS05120 d97925c92a26fca4e6f2d1184409bc2d 882 SUPERFAMILY SSF69349 549 575 1.18E-25 T 10-11-2016 CJM129_RS05120 d97925c92a26fca4e6f2d1184409bc2d 882 SUPERFAMILY SSF69349 613 833 1.18E-25 T 10-11-2016 CJM129_RS03740 b86167c1437e48e227f4a432a07cab9a 257 Gene3D G3DSA:3.40.190.10 22 150 9.1E-57 T 10-11-2016 CJM129_RS03740 b86167c1437e48e227f4a432a07cab9a 257 PANTHER PTHR30429:SF0 1 257 4.4E-125 T 10-11-2016 CJM129_RS03740 b86167c1437e48e227f4a432a07cab9a 257 SUPERFAMILY SSF53850 23 257 2.48E-85 T 10-11-2016 CJM129_RS03740 b86167c1437e48e227f4a432a07cab9a 257 Pfam PF03180 NLPA lipoprotein 24 257 5.6E-93 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS03740 b86167c1437e48e227f4a432a07cab9a 257 PANTHER PTHR30429 1 257 4.4E-125 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS03740 b86167c1437e48e227f4a432a07cab9a 257 PIRSF PIRSF002854 3 257 6.2E-104 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS01420 9a7de6ae4b7b39f7394bcfeb10ba187b 296 SMART SM00382 27 208 6.4E-17 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS01420 9a7de6ae4b7b39f7394bcfeb10ba187b 296 PANTHER PTHR24220 25 223 4.2E-69 T 10-11-2016 CJM129_RS01420 9a7de6ae4b7b39f7394bcfeb10ba187b 296 Pfam PF00005 ABC transporter 21 158 5.3E-35 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS01420 9a7de6ae4b7b39f7394bcfeb10ba187b 296 PANTHER PTHR24220:SF123 262 267 4.2E-69 T 10-11-2016 CJM129_RS01420 9a7de6ae4b7b39f7394bcfeb10ba187b 296 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS01420 9a7de6ae4b7b39f7394bcfeb10ba187b 296 PANTHER PTHR24220 262 267 4.2E-69 T 10-11-2016 CJM129_RS01420 9a7de6ae4b7b39f7394bcfeb10ba187b 296 Gene3D G3DSA:3.40.50.300 21 231 3.6E-63 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01420 9a7de6ae4b7b39f7394bcfeb10ba187b 296 PANTHER PTHR24220:SF123 25 223 4.2E-69 T 10-11-2016 CJM129_RS01420 9a7de6ae4b7b39f7394bcfeb10ba187b 296 SUPERFAMILY SSF52540 20 221 3.99E-62 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 SMART SM00116 68 116 1.1 T 10-11-2016 IPR000644 CBS domain CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 SMART SM00116 4 52 0.45 T 10-11-2016 IPR000644 CBS domain CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 Pfam PF00483 Nucleotidyl transferase 120 339 6.4E-43 T 10-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 PANTHER PTHR22572:SF114 118 340 5.0E-87 T 10-11-2016 CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 PANTHER PTHR22572 118 340 5.0E-87 T 10-11-2016 CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 Gene3D G3DSA:3.10.580.10 8 114 3.2E-20 T 10-11-2016 CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 SUPERFAMILY SSF54631 7 54 1.69E-5 T 10-11-2016 CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 Gene3D G3DSA:3.90.550.10 119 340 8.2E-67 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 Pfam PF00571 CBS domain 7 51 2.0E-6 T 10-11-2016 IPR000644 CBS domain CJM129_RS07135 c82852d6adeca71e65c4f72cace5bb39 341 SUPERFAMILY SSF53448 48 340 2.35E-65 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07815 d75bd7ac39fa6835320ec5b371f9d624 254 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 25 247 5.2E-84 T 10-11-2016 IPR014127 Conserved hypothetical protein CHP02757 CJM129_RS07815 d75bd7ac39fa6835320ec5b371f9d624 254 Pfam PF09674 Protein of unknown function (DUF2400) 29 245 5.4E-65 T 10-11-2016 IPR014127 Conserved hypothetical protein CHP02757 CJM129_RS07815 d75bd7ac39fa6835320ec5b371f9d624 254 SUPERFAMILY SSF48150 189 246 1.33E-5 T 10-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 CJM129_RS02805 598e6041a3a2bc7046406a83c99705f9 355 PANTHER PTHR13932 1 311 6.4E-83 T 10-11-2016 CJM129_RS02805 598e6041a3a2bc7046406a83c99705f9 355 Pfam PF04055 Radical SAM superfamily 5 153 5.9E-18 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS02805 598e6041a3a2bc7046406a83c99705f9 355 Gene3D G3DSA:3.80.30.20 3 205 1.7E-26 T 10-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe CJM129_RS02805 598e6041a3a2bc7046406a83c99705f9 355 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 2 352 3.7E-85 T 10-11-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- CJM129_RS02805 598e6041a3a2bc7046406a83c99705f9 355 SMART SM00729 1 218 1.8E-35 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS02805 598e6041a3a2bc7046406a83c99705f9 355 SUPERFAMILY SSF102114 2 324 2.22E-75 T 10-11-2016 CJM129_RS03155 05cba2f08634f61722a4518d52d9c9fb 601 Gene3D G3DSA:3.90.1310.10 143 240 4.8E-23 T 10-11-2016 CJM129_RS03155 05cba2f08634f61722a4518d52d9c9fb 601 SUPERFAMILY SSF56519 41 228 3.79E-37 T 10-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CJM129_RS03155 05cba2f08634f61722a4518d52d9c9fb 601 PANTHER PTHR30627 1 596 4.0E-160 T 10-11-2016 CJM129_RS03155 05cba2f08634f61722a4518d52d9c9fb 601 PANTHER PTHR30627:SF2 1 596 4.0E-160 T 10-11-2016 CJM129_RS03155 05cba2f08634f61722a4518d52d9c9fb 601 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 594 9.4E-63 T 10-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CJM129_RS03155 05cba2f08634f61722a4518d52d9c9fb 601 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 2 595 4.0E-192 T 10-11-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 CJM129_RS03155 05cba2f08634f61722a4518d52d9c9fb 601 Pfam PF03717 Penicillin-binding Protein dimerisation domain 47 222 7.8E-34 T 10-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CJM129_RS03155 05cba2f08634f61722a4518d52d9c9fb 601 Gene3D G3DSA:3.40.710.10 241 596 7.2E-94 T 10-11-2016 IPR012338 Beta-lactamase/transpeptidase-like CJM129_RS03155 05cba2f08634f61722a4518d52d9c9fb 601 SUPERFAMILY SSF56601 236 596 6.99E-85 T 10-11-2016 IPR012338 Beta-lactamase/transpeptidase-like CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 Gene3D G3DSA:3.30.230.10 2 177 6.8E-33 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 Gene3D G3DSA:3.30.70.890 207 324 3.5E-15 T 10-11-2016 IPR013750 GHMP kinase, C-terminal domain CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 Pfam PF08544 GHMP kinases C terminal 240 321 1.6E-9 T 10-11-2016 IPR013750 GHMP kinase, C-terminal domain CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 PRINTS PR00960 LmbP protein signature 148 167 5.1E-38 T 10-11-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 PRINTS PR00960 LmbP protein signature 283 302 5.1E-38 T 10-11-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 PRINTS PR00960 LmbP protein signature 8 23 5.1E-38 T 10-11-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 PRINTS PR00960 LmbP protein signature 255 279 5.1E-38 T 10-11-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 PRINTS PR00960 LmbP protein signature 106 127 5.1E-38 T 10-11-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 Pfam PF00288 GHMP kinases N terminal domain 101 168 3.0E-16 T 10-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 SUPERFAMILY SSF54211 4 187 1.9E-39 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 PANTHER PTHR32463 4 317 3.8E-67 T 10-11-2016 CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 SUPERFAMILY SSF55060 196 337 1.98E-26 T 10-11-2016 IPR013750 GHMP kinase, C-terminal domain CJM129_RS07615 95108ea55d74685201ce74371d1d2c89 339 PIRSF PIRSF036406 2 339 3.6E-139 T 10-11-2016 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 CJM129_RS08265 dc87790292b3f26f188a8cc96688248c 140 PANTHER PTHR11717:SF18 1 139 3.6E-29 T 10-11-2016 CJM129_RS08265 dc87790292b3f26f188a8cc96688248c 140 Gene3D G3DSA:3.40.50.270 1 128 2.8E-31 T 10-11-2016 CJM129_RS08265 dc87790292b3f26f188a8cc96688248c 140 SMART SM00226 1 129 9.4E-26 T 10-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJM129_RS08265 dc87790292b3f26f188a8cc96688248c 140 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 127 1.5E-19 T 10-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJM129_RS08265 dc87790292b3f26f188a8cc96688248c 140 SUPERFAMILY SSF52788 1 127 1.1E-26 T 10-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJM129_RS08265 dc87790292b3f26f188a8cc96688248c 140 PANTHER PTHR11717 1 139 3.6E-29 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 PANTHER PTHR11014:SF54 1 157 6.3E-72 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 Gene3D G3DSA:3.40.630.10 2 153 1.6E-66 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 Gene3D G3DSA:3.40.630.10 339 420 1.6E-66 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 PANTHER PTHR11014 272 420 6.3E-72 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 PANTHER PTHR11014:SF54 174 244 6.3E-72 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 PANTHER PTHR11014:SF54 272 420 6.3E-72 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 PANTHER PTHR11014 174 244 6.3E-72 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 PANTHER PTHR11014 1 157 6.3E-72 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 Gene3D G3DSA:3.30.70.360 211 256 5.5E-4 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 SUPERFAMILY SSF53187 1 173 1.64E-44 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 SUPERFAMILY SSF53187 336 420 1.64E-44 T 10-11-2016 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 Pfam PF01546 Peptidase family M20/M25/M40 57 419 2.6E-12 T 10-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 PRINTS PR00934 X-His dipeptidase (M25) signature 78 96 1.3E-8 T 10-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CJM129_RS04765 5cfba20246e98e2d1ebdbcfd39e7dbe9 422 PRINTS PR00934 X-His dipeptidase (M25) signature 217 236 1.3E-8 T 10-11-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CJM129_RS05985 1b0bb0ce2698abcb0534291ee69c273c 270 Gene3D G3DSA:3.90.550.10 1 200 4.9E-48 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05985 1b0bb0ce2698abcb0534291ee69c273c 270 PANTHER PTHR22916 1 215 1.1E-37 T 10-11-2016 CJM129_RS05985 1b0bb0ce2698abcb0534291ee69c273c 270 Pfam PF00535 Glycosyl transferase family 2 5 160 6.9E-32 T 10-11-2016 IPR001173 Glycosyltransferase 2-like CJM129_RS05985 1b0bb0ce2698abcb0534291ee69c273c 270 SUPERFAMILY SSF53448 2 227 5.63E-52 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07140 6d39dccc4407291e2362cf5ea84607ee 301 SUPERFAMILY SSF55347 112 268 9.16E-16 T 10-11-2016 CJM129_RS07140 6d39dccc4407291e2362cf5ea84607ee 301 Gene3D G3DSA:3.30.360.10 108 298 4.7E-15 T 10-11-2016 CJM129_RS07140 6d39dccc4407291e2362cf5ea84607ee 301 SUPERFAMILY SSF51735 156 175 2.58E-16 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07140 6d39dccc4407291e2362cf5ea84607ee 301 SUPERFAMILY SSF51735 1 127 2.58E-16 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07140 6d39dccc4407291e2362cf5ea84607ee 301 Gene3D G3DSA:3.40.50.720 1 86 3.9E-9 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07140 6d39dccc4407291e2362cf5ea84607ee 301 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 93 9.7E-6 T 10-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 PANTHER PTHR12383:SF27 189 272 6.0E-51 T 10-11-2016 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 Gene3D G3DSA:2.10.109.10 207 255 6.5E-48 T 10-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 Gene3D G3DSA:2.10.109.10 25 114 6.5E-48 T 10-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 PANTHER PTHR12383:SF27 18 59 6.0E-51 T 10-11-2016 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 PANTHER PTHR12383:SF27 83 150 6.0E-51 T 10-11-2016 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 SUPERFAMILY SSF51306 26 261 1.99E-56 T 10-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 PANTHER PTHR12383 18 59 6.0E-51 T 10-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 PANTHER PTHR12383 83 150 6.0E-51 T 10-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 247 1.4E-37 T 10-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 Pfam PF00717 Peptidase S24-like 34 125 3.1E-17 T 10-11-2016 IPR019759 Peptidase S24/S26A/S26B CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 PANTHER PTHR12383 189 272 6.0E-51 T 10-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 ProSitePatterns PS00761 Signal peptidases I signature 3. 212 225 - T 10-11-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 104 116 7.2E-19 T 10-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 207 226 7.2E-19 T 10-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJM129_RS04140 b5af61a6df19409b136fd7e93d110144 282 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 27 43 7.2E-19 T 10-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJM129_RS05470 78faca72d2655f5b2cbf7d096f3a6aa2 283 Gene3D G3DSA:2.120.10.30 21 281 3.3E-15 T 10-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like CJM129_RS05470 78faca72d2655f5b2cbf7d096f3a6aa2 283 SUPERFAMILY SSF63825 26 261 3.4E-22 T 10-11-2016 CJM129_RS07575 6055e141d5e1238bd2a311aa89d5253d 779 Pfam PF00391 PEP-utilising enzyme, mobile domain 703 758 1.6E-10 T 10-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CJM129_RS07575 6055e141d5e1238bd2a311aa89d5253d 779 Gene3D G3DSA:3.30.470.20 118 214 3.2E-5 T 10-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CJM129_RS07575 6055e141d5e1238bd2a311aa89d5253d 779 Gene3D G3DSA:3.50.30.10 694 777 3.3E-13 T 10-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CJM129_RS07575 6055e141d5e1238bd2a311aa89d5253d 779 SUPERFAMILY SSF52009 694 767 1.26E-13 T 10-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CJM129_RS07575 6055e141d5e1238bd2a311aa89d5253d 779 Gene3D G3DSA:3.30.1490.20 10 100 1.7E-7 T 10-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJM129_RS07575 6055e141d5e1238bd2a311aa89d5253d 779 SUPERFAMILY SSF56059 49 219 3.25E-10 T 10-11-2016 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 PRINTS PR01486 Bacterial phospholipase A1 protein signature 140 156 1.6E-52 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 PRINTS PR01486 Bacterial phospholipase A1 protein signature 277 294 1.6E-52 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 PRINTS PR01486 Bacterial phospholipase A1 protein signature 242 260 1.6E-52 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 PRINTS PR01486 Bacterial phospholipase A1 protein signature 190 204 1.6E-52 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 PRINTS PR01486 Bacterial phospholipase A1 protein signature 118 135 1.6E-52 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 PRINTS PR01486 Bacterial phospholipase A1 protein signature 300 320 1.6E-52 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 PRINTS PR01486 Bacterial phospholipase A1 protein signature 161 180 1.6E-52 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 PRINTS PR01486 Bacterial phospholipase A1 protein signature 207 225 1.6E-52 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 SUPERFAMILY SSF56931 89 328 3.92E-76 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 Pfam PF02253 Phospholipase A1 88 326 1.2E-79 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 Gene3D G3DSA:2.40.230.10 88 327 7.7E-80 T 10-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 CJM129_RS07245 487932ae80894cf36a55573da5a4b43a 329 PANTHER PTHR40457 78 329 6.0E-47 T 10-11-2016 CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 SUPERFAMILY SSF51569 3 297 1.59E-76 T 10-11-2016 CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 SUPERFAMILY SSF51269 279 345 3.92E-18 T 10-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 SMART SM00858 287 346 2.4E-9 T 10-11-2016 IPR013974 SAF domain CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 Pfam PF08666 SAF domain 289 344 4.2E-8 T 10-11-2016 IPR013974 SAF domain CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 PANTHER PTHR23416:SF62 4 296 5.5E-59 T 10-11-2016 CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 PANTHER PTHR23416 4 296 5.5E-59 T 10-11-2016 CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 Gene3D G3DSA:3.90.1210.10 289 345 5.0E-23 T 10-11-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 Gene3D G3DSA:3.20.20.70 4 270 3.2E-84 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 Pfam PF03102 NeuB family 37 270 6.7E-66 T 10-11-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 CJM129_RS05960 30e71e7453b1149790b3751405f2fff3 346 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 18 340 5.9E-122 T 10-11-2016 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 CJM129_RS03725 7c6c82ebdc07c325848c600787cd09d6 220 Pfam PF13144 Chaperone for flagella basal body P-ring formation 22 216 9.5E-27 T 10-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CJM129_RS03725 7c6c82ebdc07c325848c600787cd09d6 220 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 87 220 4.6E-31 T 10-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 Gene3D G3DSA:3.20.20.70 3 273 1.0E-63 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 Hamap MF_01694 Biotin synthase [bioB]. 2 274 32.176 T 10-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 SUPERFAMILY SSF102114 5 268 1.7E-52 T 10-11-2016 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 183 271 2.0E-9 T 10-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 PIRSF PIRSF001619 1 277 4.7E-80 T 10-11-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 SMART SM00876 183 273 3.6E-24 T 10-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 SMART SM00729 6 211 2.1E-30 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 PANTHER PTHR22976 1 272 7.2E-80 T 10-11-2016 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 Pfam PF04055 Radical SAM superfamily 14 170 4.3E-12 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 TIGRFAM TIGR00433 bioB: biotin synthase 2 271 4.1E-85 T 10-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 CJM129_RS08985 927b34c192b91dfb542ddca4e8fbd8de 278 PANTHER PTHR22976:SF1 1 272 7.2E-80 T 10-11-2016 CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 Pfam PF00271 Helicase conserved C-terminal domain 397 486 1.8E-7 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 SMART SM00487 107 291 3.8E-16 T 10-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 Pfam PF00270 DEAD/DEAH box helicase 114 268 8.0E-14 T 10-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 SMART SM00490 389 486 5.8E-9 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 Gene3D G3DSA:3.40.50.300 301 325 9.8E-22 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 Gene3D G3DSA:3.40.50.300 390 521 9.8E-22 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 TIGRFAM TIGR00595 priA: primosomal protein N' 129 601 8.1E-147 T 10-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 SUPERFAMILY SSF52540 122 337 2.84E-34 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 SUPERFAMILY SSF52540 400 488 2.84E-34 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 Gene3D G3DSA:3.40.50.300 106 280 6.0E-33 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 PANTHER PTHR30580 103 612 1.4E-135 T 10-11-2016 CJM129_RS03300 336e6d5b1437ef81be66fe54ecc3903e 612 Hamap MF_00983 Probable primosomal protein N' [priA]. 3 611 18.655 T 10-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CJM129_RS08790 37c7ef1bbf2d959a8c67e8a55d05ba67 372 PANTHER PTHR30489 14 372 6.0E-31 T 10-11-2016 CJM129_RS08790 37c7ef1bbf2d959a8c67e8a55d05ba67 372 Pfam PF12704 MacB-like periplasmic core domain 22 192 2.8E-9 T 10-11-2016 IPR025857 MacB-like periplasmic core domain CJM129_RS08790 37c7ef1bbf2d959a8c67e8a55d05ba67 372 Pfam PF02687 FtsX-like permease family 251 364 6.2E-18 T 10-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CJM129_RS05395 ff67b20f42e16184f11fa137ea80d0fc 171 PIRSF PIRSF028687 1 171 2.6E-57 T 10-11-2016 IPR007293 Flagellar protein FlgP CJM129_RS05395 ff67b20f42e16184f11fa137ea80d0fc 171 Pfam PF02169 LPP20 lipoprotein 64 157 1.0E-7 T 10-11-2016 IPR024952 Lipoprotein LPP20-like CJM129_RS04345 995c0be5aa3102e293c508551f350c85 247 PANTHER PTHR30614:SF15 41 247 4.1E-71 T 10-11-2016 CJM129_RS04345 995c0be5aa3102e293c508551f350c85 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 46 139 1.8E-19 T 10-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CJM129_RS04345 995c0be5aa3102e293c508551f350c85 247 Gene3D G3DSA:1.10.3720.10 45 245 6.3E-49 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04345 995c0be5aa3102e293c508551f350c85 247 SUPERFAMILY SSF161098 48 230 1.27E-43 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04345 995c0be5aa3102e293c508551f350c85 247 PANTHER PTHR30614 41 247 4.1E-71 T 10-11-2016 CJM129_RS04345 995c0be5aa3102e293c508551f350c85 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 243 1.8E-21 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04345 995c0be5aa3102e293c508551f350c85 247 PRINTS PR00173 Glutamate-aspartate symporter signature 101 121 1.1E-5 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS04345 995c0be5aa3102e293c508551f350c85 247 PRINTS PR00173 Glutamate-aspartate symporter signature 53 73 1.1E-5 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 SUPERFAMILY SSF56420 1 169 1.57E-56 T 10-11-2016 IPR023635 Peptide deformylase CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 Hamap MF_00163 Peptide deformylase [def]. 1 167 28.343 T 10-11-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 165 1.8E-51 T 10-11-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 PRINTS PR01576 Peptide deformylase signature 32 61 8.1E-34 T 10-11-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 PRINTS PR01576 Peptide deformylase signature 106 124 8.1E-34 T 10-11-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 PRINTS PR01576 Peptide deformylase signature 125 154 8.1E-34 T 10-11-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 PRINTS PR01576 Peptide deformylase signature 94 105 8.1E-34 T 10-11-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 PANTHER PTHR10458 1 170 1.3E-54 T 10-11-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 Pfam PF01327 Polypeptide deformylase 3 156 2.6E-49 T 10-11-2016 IPR023635 Peptide deformylase CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 Gene3D G3DSA:3.90.45.10 4 173 6.1E-57 T 10-11-2016 IPR023635 Peptide deformylase CJM129_RS00965 79feb0a104a37da7777444c4a09b9bef 175 PIRSF PIRSF004749 1 175 2.4E-48 T 10-11-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 CJM129_RS02180 7d366ac57d0a28880b27b5fe84bf5ea3 64 Gene3D G3DSA:2.30.170.40 2 60 6.1E-26 T 10-11-2016 CJM129_RS02180 7d366ac57d0a28880b27b5fe84bf5ea3 64 SUPERFAMILY SSF143800 1 62 8.04E-27 T 10-11-2016 CJM129_RS02180 7d366ac57d0a28880b27b5fe84bf5ea3 64 Pfam PF00830 Ribosomal L28 family 3 60 2.9E-25 T 10-11-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 CJM129_RS02180 7d366ac57d0a28880b27b5fe84bf5ea3 64 PANTHER PTHR13528 1 60 7.3E-17 T 10-11-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 CJM129_RS02180 7d366ac57d0a28880b27b5fe84bf5ea3 64 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 63 20.824 T 10-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02180 7d366ac57d0a28880b27b5fe84bf5ea3 64 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 3.3E-26 T 10-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08410 eca5cee9f6029e1a0e714dfb2dfdfe29 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.3E-27 T 10-11-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CJM129_RS08410 eca5cee9f6029e1a0e714dfb2dfdfe29 72 SUPERFAMILY SSF50249 1 71 3.43E-27 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS08410 eca5cee9f6029e1a0e714dfb2dfdfe29 72 PANTHER PTHR33370 2 72 2.2E-42 T 10-11-2016 CJM129_RS08410 eca5cee9f6029e1a0e714dfb2dfdfe29 72 SMART SM00316 2 72 0.0014 T 10-11-2016 IPR022967 RNA-binding domain, S1 CJM129_RS08410 eca5cee9f6029e1a0e714dfb2dfdfe29 72 Gene3D G3DSA:2.40.50.140 2 72 7.7E-37 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS08410 eca5cee9f6029e1a0e714dfb2dfdfe29 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 8.0E-35 T 10-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CJM129_RS08410 eca5cee9f6029e1a0e714dfb2dfdfe29 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.915 T 10-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CJM129_RS07045 649368f13c5649b902b8b3cfa5bcf6fb 404 Gene3D G3DSA:3.40.50.1820 153 335 7.5E-10 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07045 649368f13c5649b902b8b3cfa5bcf6fb 404 Gene3D G3DSA:3.40.50.1820 15 82 7.5E-10 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07045 649368f13c5649b902b8b3cfa5bcf6fb 404 Pfam PF11144 Protein of unknown function (DUF2920) 5 402 2.2E-180 T 10-11-2016 IPR022605 Protein of unknown function DUF2920 CJM129_RS07045 649368f13c5649b902b8b3cfa5bcf6fb 404 SUPERFAMILY SSF53474 7 83 2.01E-16 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07045 649368f13c5649b902b8b3cfa5bcf6fb 404 SUPERFAMILY SSF53474 257 335 2.01E-16 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS07045 649368f13c5649b902b8b3cfa5bcf6fb 404 SUPERFAMILY SSF53474 156 229 2.01E-16 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 199 225 - T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 Pfam PF04542 Sigma-70 region 2 20 89 2.7E-10 T 10-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 SUPERFAMILY SSF88946 16 91 1.39E-15 T 10-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 SUPERFAMILY SSF88659 93 167 6.98E-9 T 10-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 Pfam PF04545 Sigma-70, region 4 178 227 6.3E-18 T 10-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 Gene3D G3DSA:1.10.10.10 102 139 2.0E-4 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 229 5.7E-34 T 10-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 PANTHER PTHR30385 17 229 2.7E-33 T 10-11-2016 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 PANTHER PTHR30385:SF7 17 229 2.7E-33 T 10-11-2016 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 Gene3D G3DSA:1.10.10.10 166 229 1.0E-13 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 229 3.8E-61 T 10-11-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 SUPERFAMILY SSF88659 152 229 5.79E-19 T 10-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 PRINTS PR00046 Major sigma-70 factor signature 91 104 8.4E-7 T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 PRINTS PR00046 Major sigma-70 factor signature 199 214 8.4E-7 T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 PRINTS PR00046 Major sigma-70 factor signature 182 194 8.4E-7 T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00320 d0410e2240cd47e72246e33e10f3c1ac 230 PRINTS PR00046 Major sigma-70 factor signature 214 225 8.4E-7 T 10-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 10-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 PANTHER PTHR33280:SF2 1 66 4.2E-35 T 10-11-2016 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 PANTHER PTHR33280 1 66 4.2E-35 T 10-11-2016 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 3.1E-22 T 10-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 3.1E-22 T 10-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.1E-22 T 10-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 SUPERFAMILY SSF143800 1 65 7.85E-26 T 10-11-2016 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 Pfam PF01197 Ribosomal protein L31 1 64 9.5E-32 T 10-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 6.5E-32 T 10-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00785 6266d5065c1e1389c0e83f8d566ac566 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 29.837 T 10-11-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00605 c8d94d4c52bc2dbcdeaef4d0daa83eeb 173 PANTHER PTHR11080 1 173 1.2E-15 T 10-11-2016 CJM129_RS00605 c8d94d4c52bc2dbcdeaef4d0daa83eeb 173 Pfam PF00857 Isochorismatase family 4 172 9.3E-14 T 10-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CJM129_RS00605 c8d94d4c52bc2dbcdeaef4d0daa83eeb 173 PANTHER PTHR11080:SF2 1 173 1.2E-15 T 10-11-2016 CJM129_RS00605 c8d94d4c52bc2dbcdeaef4d0daa83eeb 173 Gene3D G3DSA:3.40.50.850 1 172 9.0E-24 T 10-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CJM129_RS00605 c8d94d4c52bc2dbcdeaef4d0daa83eeb 173 SUPERFAMILY SSF52499 1 173 4.32E-28 T 10-11-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CJM129_RS05835 2343f47d7e81cbffdb8ff813b6082f2e 242 PANTHER PTHR15362 6 139 2.0E-29 T 10-11-2016 CJM129_RS05835 2343f47d7e81cbffdb8ff813b6082f2e 242 Pfam PF01066 CDP-alcohol phosphatidyltransferase 10 74 3.4E-15 T 10-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJM129_RS05835 2343f47d7e81cbffdb8ff813b6082f2e 242 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 16 178 2.2E-45 T 10-11-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 CJM129_RS05835 2343f47d7e81cbffdb8ff813b6082f2e 242 PANTHER PTHR15362:SF2 6 139 2.0E-29 T 10-11-2016 CJM129_RS05835 2343f47d7e81cbffdb8ff813b6082f2e 242 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 52 74 - T 10-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 100 115 - T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 PANTHER PTHR30330 3 488 8.9E-189 T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 Pfam PF01235 Sodium:alanine symporter family 63 474 1.1E-139 T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 PANTHER PTHR30330:SF1 3 488 8.9E-189 T 10-11-2016 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 TIGRFAM TIGR00835 agcS: amino acid carrier protein 28 462 1.1E-126 T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 PRINTS PR00175 Sodium/alanine symporter signature 100 122 1.7E-43 T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 PRINTS PR00175 Sodium/alanine symporter signature 322 340 1.7E-43 T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 PRINTS PR00175 Sodium/alanine symporter signature 431 451 1.7E-43 T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 PRINTS PR00175 Sodium/alanine symporter signature 232 251 1.7E-43 T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 PRINTS PR00175 Sodium/alanine symporter signature 371 393 1.7E-43 T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS04355 1122d4312f24ab715c1ffefb25261273 488 PRINTS PR00175 Sodium/alanine symporter signature 204 222 1.7E-43 T 10-11-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJM129_RS02900 8f4044bc0eddcee611eb5e68b09c0eda 317 Pfam PF00691 OmpA family 187 288 2.7E-12 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS02900 8f4044bc0eddcee611eb5e68b09c0eda 317 PANTHER PTHR30128 180 256 3.2E-12 T 10-11-2016 CJM129_RS02900 8f4044bc0eddcee611eb5e68b09c0eda 317 Gene3D G3DSA:3.30.1330.60 172 299 1.7E-25 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS02900 8f4044bc0eddcee611eb5e68b09c0eda 317 SUPERFAMILY SSF103088 177 299 8.24E-20 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS08165 d00c45de0cdbec224c7cdd964c14abec 331 SMART SM00382 26 207 2.0E-7 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS08165 d00c45de0cdbec224c7cdd964c14abec 331 PANTHER PTHR24220 3 214 5.3E-41 T 10-11-2016 CJM129_RS08165 d00c45de0cdbec224c7cdd964c14abec 331 SUPERFAMILY SSF52540 1 214 1.03E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08165 d00c45de0cdbec224c7cdd964c14abec 331 Gene3D G3DSA:3.40.50.300 1 215 6.6E-42 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08165 d00c45de0cdbec224c7cdd964c14abec 331 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS08165 d00c45de0cdbec224c7cdd964c14abec 331 Pfam PF00005 ABC transporter 20 158 1.7E-16 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS07560 6b0477aabafcc48991454cecce5a8494 170 PRINTS PR01100 Shikimate kinase family signature 8 23 5.6E-5 T 10-11-2016 CJM129_RS07560 6b0477aabafcc48991454cecce5a8494 170 PRINTS PR01100 Shikimate kinase family signature 101 118 5.6E-5 T 10-11-2016 CJM129_RS07560 6b0477aabafcc48991454cecce5a8494 170 SUPERFAMILY SSF52540 4 168 1.1E-27 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07560 6b0477aabafcc48991454cecce5a8494 170 PANTHER PTHR11055:SF15 7 168 2.4E-24 T 10-11-2016 CJM129_RS07560 6b0477aabafcc48991454cecce5a8494 170 Pfam PF01583 Adenylylsulphate kinase 5 152 1.0E-34 T 10-11-2016 CJM129_RS07560 6b0477aabafcc48991454cecce5a8494 170 PANTHER PTHR11055 7 168 2.4E-24 T 10-11-2016 CJM129_RS07560 6b0477aabafcc48991454cecce5a8494 170 Gene3D G3DSA:3.40.50.300 3 168 1.2E-42 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 31 58 6.5E-5 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 140 1.6E-8 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 3 29 3.6E-4 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 Gene3D G3DSA:1.20.1180.10 199 262 6.2E-25 T 10-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 SUPERFAMILY SSF51161 3 244 6.13E-68 T 10-11-2016 IPR011004 Trimeric LpxA-like CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 10-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 PANTHER PTHR23416:SF8 1 248 7.1E-95 T 10-11-2016 CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 PANTHER PTHR23416 1 248 7.1E-95 T 10-11-2016 CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 Gene3D G3DSA:2.160.10.10 90 198 6.3E-25 T 10-11-2016 CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 PIRSF PIRSF000456 1 263 4.9E-100 T 10-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 254 1.7E-20 T 10-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 Gene3D G3DSA:2.160.10.10 3 89 9.5E-21 T 10-11-2016 CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 42.591 T 10-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CJM129_RS01315 eb68a9fe2c439fdad7b9706eca6df158 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 254 7.1E-103 T 10-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 CJM129_RS01820 94868ec7d2cc679f49c6636297f4d044 279 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 227 33.894 T 10-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01820 94868ec7d2cc679f49c6636297f4d044 279 PANTHER PTHR32119 1 234 1.5E-75 T 10-11-2016 CJM129_RS01820 94868ec7d2cc679f49c6636297f4d044 279 Gene3D G3DSA:3.20.20.70 2 226 1.7E-75 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS01820 94868ec7d2cc679f49c6636297f4d044 279 SMART SM00934 2 222 2.4E-77 T 10-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01820 94868ec7d2cc679f49c6636297f4d044 279 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 3 222 1.7E-75 T 10-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01820 94868ec7d2cc679f49c6636297f4d044 279 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 55 68 - T 10-11-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01820 94868ec7d2cc679f49c6636297f4d044 279 PANTHER PTHR32119:SF2 1 234 1.5E-75 T 10-11-2016 CJM129_RS01820 94868ec7d2cc679f49c6636297f4d044 279 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 1 222 1.2E-48 T 10-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS01820 94868ec7d2cc679f49c6636297f4d044 279 SUPERFAMILY SSF51366 2 226 2.63E-64 T 10-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJM129_RS02525 6e9794f04f2474c814972efd6d93821b 143 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 10 134 3.6E-23 T 10-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CJM129_RS02525 6e9794f04f2474c814972efd6d93821b 143 PANTHER PTHR30435:SF12 1 129 1.7E-16 T 10-11-2016 CJM129_RS02525 6e9794f04f2474c814972efd6d93821b 143 PANTHER PTHR30435 1 129 1.7E-16 T 10-11-2016 CJM129_RS02525 6e9794f04f2474c814972efd6d93821b 143 PIRSF PIRSF002889 1 139 2.6E-29 T 10-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CJM129_RS07950 927386c6a4af893612974be785df5afd 183 Pfam PF04368 Protein of unknown function (DUF507) 1 182 9.8E-70 T 10-11-2016 IPR007463 Protein of unknown function DUF507 CJM129_RS08865 0c20bc98e84b74e79cb7aad83de629a6 60 SUPERFAMILY SSF46955 8 55 2.38E-5 T 10-11-2016 IPR009061 Putative DNA-binding domain CJM129_RS08865 0c20bc98e84b74e79cb7aad83de629a6 60 Pfam PF12728 Helix-turn-helix domain 8 57 2.1E-8 T 10-11-2016 CJM129_RS05760 091f78a0ea5fc34a2f23c14050f6ffaa 573 PANTHER PTHR11804 183 570 8.1E-62 T 10-11-2016 CJM129_RS05760 091f78a0ea5fc34a2f23c14050f6ffaa 573 Pfam PF08439 Oligopeptidase F 101 166 1.4E-10 T 10-11-2016 IPR013647 Oligopeptidase F, N-terminal domain CJM129_RS05760 091f78a0ea5fc34a2f23c14050f6ffaa 573 Gene3D G3DSA:3.40.390.10 324 401 4.4E-5 T 10-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CJM129_RS05760 091f78a0ea5fc34a2f23c14050f6ffaa 573 SUPERFAMILY SSF55486 44 571 5.05E-100 T 10-11-2016 CJM129_RS05760 091f78a0ea5fc34a2f23c14050f6ffaa 573 PANTHER PTHR11804:SF8 183 570 8.1E-62 T 10-11-2016 CJM129_RS05760 091f78a0ea5fc34a2f23c14050f6ffaa 573 Pfam PF01432 Peptidase family M3 183 554 7.5E-48 T 10-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 CJM129_RS07285 62ba96b2d4bad069847ea17e79ea4f95 171 Gene3D G3DSA:1.10.3820.10 12 169 1.3E-23 T 10-11-2016 CJM129_RS07285 62ba96b2d4bad069847ea17e79ea4f95 171 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 21 167 6.4E-52 T 10-11-2016 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 CJM129_RS07285 62ba96b2d4bad069847ea17e79ea4f95 171 SUPERFAMILY SSF48695 15 168 4.06E-33 T 10-11-2016 IPR011031 Multihaem cytochrome CJM129_RS07285 62ba96b2d4bad069847ea17e79ea4f95 171 PIRSF PIRSF000013 2 170 5.1E-13 T 10-11-2016 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CJM129_RS07285 62ba96b2d4bad069847ea17e79ea4f95 171 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 18 168 1.3E-21 T 10-11-2016 IPR005126 NapC/NirT cytochrome c, N-terminal CJM129_RS07285 62ba96b2d4bad069847ea17e79ea4f95 171 PANTHER PTHR30333 1 168 1.4E-16 T 10-11-2016 CJM129_RS01590 44b59adf00e3871d243dcf5fe6470a10 198 PANTHER PTHR10681 1 193 7.3E-78 T 10-11-2016 CJM129_RS01590 44b59adf00e3871d243dcf5fe6470a10 198 SUPERFAMILY SSF52833 3 193 1.33E-61 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS01590 44b59adf00e3871d243dcf5fe6470a10 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 192 3.3E-9 T 10-11-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CJM129_RS01590 44b59adf00e3871d243dcf5fe6470a10 198 PIRSF PIRSF000239 1 197 4.2E-56 T 10-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 CJM129_RS01590 44b59adf00e3871d243dcf5fe6470a10 198 Pfam PF00578 AhpC/TSA family 4 137 1.8E-30 T 10-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CJM129_RS01590 44b59adf00e3871d243dcf5fe6470a10 198 Gene3D G3DSA:3.40.30.10 3 192 3.9E-64 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS07975 0eef73fb0181fb9206b6da5bb0c0b6df 402 PANTHER PTHR30574 2 352 1.3E-172 T 10-11-2016 CJM129_RS07975 0eef73fb0181fb9206b6da5bb0c0b6df 402 PANTHER PTHR30574:SF6 2 352 1.3E-172 T 10-11-2016 CJM129_RS07975 0eef73fb0181fb9206b6da5bb0c0b6df 402 Pfam PF04143 Sulphur transport 245 392 5.2E-18 T 10-11-2016 IPR007272 Sulphur transport domain CJM129_RS07975 0eef73fb0181fb9206b6da5bb0c0b6df 402 Pfam PF04143 Sulphur transport 3 159 3.7E-26 T 10-11-2016 IPR007272 Sulphur transport domain CJM129_RS04260 8a5836b5eb456abe6a00ab5c96c9f613 946 PANTHER PTHR22683 402 946 1.7E-205 T 10-11-2016 CJM129_RS04260 8a5836b5eb456abe6a00ab5c96c9f613 946 PANTHER PTHR22683:SF41 402 946 1.7E-205 T 10-11-2016 CJM129_RS04260 8a5836b5eb456abe6a00ab5c96c9f613 946 SMART SM00843 885 946 1.2E-27 T 10-11-2016 IPR018541 FtsK gamma domain CJM129_RS04260 8a5836b5eb456abe6a00ab5c96c9f613 946 Gene3D G3DSA:3.40.50.300 567 849 7.6E-84 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04260 8a5836b5eb456abe6a00ab5c96c9f613 946 Pfam PF09397 Ftsk gamma domain 887 946 1.2E-23 T 10-11-2016 IPR018541 FtsK gamma domain CJM129_RS04260 8a5836b5eb456abe6a00ab5c96c9f613 946 Pfam PF01580 FtsK/SpoIIIE family 594 730 2.9E-50 T 10-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CJM129_RS04260 8a5836b5eb456abe6a00ab5c96c9f613 946 Pfam PF01580 FtsK/SpoIIIE family 734 784 9.7E-15 T 10-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CJM129_RS04260 8a5836b5eb456abe6a00ab5c96c9f613 946 SUPERFAMILY SSF52540 566 856 3.23E-45 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04260 8a5836b5eb456abe6a00ab5c96c9f613 946 SUPERFAMILY SSF46785 885 946 3.26E-17 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 554 571 - T 10-11-2016 IPR001882 Biotin-binding site CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 SUPERFAMILY SSF89000 308 466 1.77E-36 T 10-11-2016 CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 Pfam PF02436 Conserved carboxylase domain 307 493 3.3E-39 T 10-11-2016 IPR003379 Carboxylase, conserved domain CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 Gene3D G3DSA:2.40.50.100 528 595 1.2E-22 T 10-11-2016 CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 SUPERFAMILY SSF51569 4 300 7.87E-54 T 10-11-2016 CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 Gene3D G3DSA:3.20.20.70 2 290 9.8E-68 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 PANTHER PTHR18866:SF109 1 594 5.7E-59 T 10-11-2016 CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 Pfam PF00682 HMGL-like 7 268 2.8E-14 T 10-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 PANTHER PTHR18866 1 594 5.7E-59 T 10-11-2016 CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 SUPERFAMILY SSF51230 527 596 2.49E-19 T 10-11-2016 IPR011053 Single hybrid motif CJM129_RS04500 5c3e81ad30cc16f483303e01a2955821 599 Pfam PF00364 Biotin-requiring enzyme 538 595 1.0E-16 T 10-11-2016 IPR000089 Biotin/lipoyl attachment CJM129_RS06180 2c868c73ed27b8828f920760de26dcd9 167 PANTHER PTHR10134 6 161 1.0E-26 T 10-11-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 CJM129_RS06180 2c868c73ed27b8828f920760de26dcd9 167 Gene3D G3DSA:2.102.10.10 10 157 3.2E-35 T 10-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJM129_RS06180 2c868c73ed27b8828f920760de26dcd9 167 SUPERFAMILY SSF50022 28 161 2.76E-31 T 10-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJM129_RS06180 2c868c73ed27b8828f920760de26dcd9 167 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 6 154 4.6E-47 T 10-11-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CJM129_RS06180 2c868c73ed27b8828f920760de26dcd9 167 PRINTS PR00162 Rieske 2Fe-2S subunit signature 115 127 3.1E-9 T 10-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CJM129_RS06180 2c868c73ed27b8828f920760de26dcd9 167 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 139 3.1E-9 T 10-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CJM129_RS06180 2c868c73ed27b8828f920760de26dcd9 167 PRINTS PR00162 Rieske 2Fe-2S subunit signature 94 105 3.1E-9 T 10-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CJM129_RS06180 2c868c73ed27b8828f920760de26dcd9 167 Pfam PF00355 Rieske [2Fe-2S] domain 52 143 4.2E-12 T 10-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJM129_RS01345 30621f2ade00bf01a2532a6fec3a5d8e 325 Pfam PF00923 Transaldolase 6 324 1.0E-75 T 10-11-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CJM129_RS01345 30621f2ade00bf01a2532a6fec3a5d8e 325 PIRSF PIRSF036915 2 325 3.6E-56 T 10-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CJM129_RS01345 30621f2ade00bf01a2532a6fec3a5d8e 325 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 10-11-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CJM129_RS01345 30621f2ade00bf01a2532a6fec3a5d8e 325 Hamap MF_00493 Transaldolase [tal]. 1 325 72.851 T 10-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CJM129_RS01345 30621f2ade00bf01a2532a6fec3a5d8e 325 Gene3D G3DSA:3.20.20.70 4 325 7.5E-78 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS01345 30621f2ade00bf01a2532a6fec3a5d8e 325 PANTHER PTHR10683:SF6 27 325 6.3E-37 T 10-11-2016 CJM129_RS01345 30621f2ade00bf01a2532a6fec3a5d8e 325 PANTHER PTHR10683 27 325 6.3E-37 T 10-11-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CJM129_RS01345 30621f2ade00bf01a2532a6fec3a5d8e 325 TIGRFAM TIGR00876 tal_mycobact: transaldolase 3 323 3.4E-70 T 10-11-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 CJM129_RS01345 30621f2ade00bf01a2532a6fec3a5d8e 325 SUPERFAMILY SSF51569 4 325 1.34E-58 T 10-11-2016 CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 PANTHER PTHR11986 4 424 3.7E-190 T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 PANTHER PTHR11986:SF5 4 424 3.7E-190 T 10-11-2016 CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 Gene3D G3DSA:3.90.1150.10 318 422 1.5E-44 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 Gene3D G3DSA:3.90.1150.10 2 68 1.5E-44 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 Pfam PF00202 Aminotransferase class-III 32 394 1.1E-72 T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 423 2.9E-183 T 10-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 232 268 - T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 SUPERFAMILY SSF53383 2 423 1.03E-120 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 Gene3D G3DSA:3.40.640.10 69 312 2.2E-73 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS04125 0a664cbea8bca95d1967dfdd86951db6 424 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 2 424 98.392 T 10-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 CJM129_RS01825 eefcfe98e7901566fcbc454244aa1381 132 SUPERFAMILY SSF48013 4 127 2.35E-35 T 10-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CJM129_RS01825 eefcfe98e7901566fcbc454244aa1381 132 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 2 132 22.806 T 10-11-2016 IPR011605 NusB antitermination factor GO:0006353 CJM129_RS01825 eefcfe98e7901566fcbc454244aa1381 132 PANTHER PTHR11078 4 130 9.9E-35 T 10-11-2016 IPR011605 NusB antitermination factor GO:0006353 CJM129_RS01825 eefcfe98e7901566fcbc454244aa1381 132 Pfam PF01029 NusB family 6 128 6.5E-34 T 10-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CJM129_RS01825 eefcfe98e7901566fcbc454244aa1381 132 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 130 8.9E-38 T 10-11-2016 IPR011605 NusB antitermination factor GO:0006353 CJM129_RS01825 eefcfe98e7901566fcbc454244aa1381 132 Gene3D G3DSA:1.10.940.10 1 130 1.5E-38 T 10-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CJM129_RS08625 cf741a06466d70c24c4492cc6118eb73 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 127 2.6E-21 T 10-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CJM129_RS08625 cf741a06466d70c24c4492cc6118eb73 129 PANTHER PTHR30558 10 129 3.9E-16 T 10-11-2016 CJM129_RS08625 cf741a06466d70c24c4492cc6118eb73 129 TIGRFAM TIGR02804 ExbD_2: TonB system transport protein ExbD 7 127 3.9E-59 T 10-11-2016 IPR014171 TonB system transport protein ExbD type-2 GO:0006810|GO:0016020 CJM129_RS08310 f26bb5dd740af2b8adbca61c262701d2 172 PANTHER PTHR33269:SF1 1 170 7.5E-29 T 10-11-2016 CJM129_RS08310 f26bb5dd740af2b8adbca61c262701d2 172 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 20 162 3.9E-25 T 10-11-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 CJM129_RS08310 f26bb5dd740af2b8adbca61c262701d2 172 PANTHER PTHR33269 1 170 7.5E-29 T 10-11-2016 CJM129_RS04505 285691702580aee6fbe60d0f4e3669e4 446 PANTHER PTHR11616:SF167 2 445 2.0E-100 T 10-11-2016 CJM129_RS04505 285691702580aee6fbe60d0f4e3669e4 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 297 316 2.8E-15 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04505 285691702580aee6fbe60d0f4e3669e4 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 38 57 2.8E-15 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04505 285691702580aee6fbe60d0f4e3669e4 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 249 269 2.8E-15 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04505 285691702580aee6fbe60d0f4e3669e4 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 9 30 2.8E-15 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04505 285691702580aee6fbe60d0f4e3669e4 446 Pfam PF00209 Sodium:neurotransmitter symporter family 145 444 3.7E-20 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04505 285691702580aee6fbe60d0f4e3669e4 446 Pfam PF00209 Sodium:neurotransmitter symporter family 3 120 1.3E-17 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS04505 285691702580aee6fbe60d0f4e3669e4 446 SUPERFAMILY SSF161070 6 445 8.37E-101 T 10-11-2016 CJM129_RS04505 285691702580aee6fbe60d0f4e3669e4 446 PANTHER PTHR11616 2 445 2.0E-100 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS00945 b22e74cb7be2a9b1e4d4ccc38405bdb3 188 Gene3D G3DSA:3.40.50.170 4 183 4.6E-59 T 10-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS00945 b22e74cb7be2a9b1e4d4ccc38405bdb3 188 SUPERFAMILY SSF53328 4 183 4.71E-46 T 10-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS00945 b22e74cb7be2a9b1e4d4ccc38405bdb3 188 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 184 2.2E-50 T 10-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CJM129_RS00945 b22e74cb7be2a9b1e4d4ccc38405bdb3 188 PANTHER PTHR10520 4 183 9.5E-56 T 10-11-2016 CJM129_RS00945 b22e74cb7be2a9b1e4d4ccc38405bdb3 188 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 188 24.259 T 10-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 CJM129_RS00945 b22e74cb7be2a9b1e4d4ccc38405bdb3 188 Pfam PF00551 Formyl transferase 4 181 1.2E-44 T 10-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS03390 c9cdf1f7941c207bbc6764d896a2b68d 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 30.348 T 10-11-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CJM129_RS03390 c9cdf1f7941c207bbc6764d896a2b68d 164 Pfam PF00731 AIR carboxylase 4 151 1.2E-57 T 10-11-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CJM129_RS03390 c9cdf1f7941c207bbc6764d896a2b68d 164 SMART SM01001 2 153 4.0E-91 T 10-11-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CJM129_RS03390 c9cdf1f7941c207bbc6764d896a2b68d 164 Gene3D G3DSA:3.40.50.7700 4 160 5.4E-64 T 10-11-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CJM129_RS03390 c9cdf1f7941c207bbc6764d896a2b68d 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 160 1.5E-61 T 10-11-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CJM129_RS03390 c9cdf1f7941c207bbc6764d896a2b68d 164 SUPERFAMILY SSF52255 3 160 7.06E-61 T 10-11-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 CJM129_RS03390 c9cdf1f7941c207bbc6764d896a2b68d 164 PANTHER PTHR23046 4 164 9.7E-67 T 10-11-2016 CJM129_RS03390 c9cdf1f7941c207bbc6764d896a2b68d 164 PIRSF PIRSF001338 1 163 3.1E-62 T 10-11-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 CJM129_RS00760 e0a74613e76c242ef578f1fc3e457302 400 PANTHER PTHR11751:SF302 15 398 2.7E-199 T 10-11-2016 CJM129_RS00760 e0a74613e76c242ef578f1fc3e457302 400 Pfam PF00155 Aminotransferase class I and II 34 392 4.1E-62 T 10-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJM129_RS00760 e0a74613e76c242ef578f1fc3e457302 400 Gene3D G3DSA:3.40.640.10 47 267 3.6E-61 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS00760 e0a74613e76c242ef578f1fc3e457302 400 Gene3D G3DSA:3.90.1150.10 268 399 3.1E-41 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS00760 e0a74613e76c242ef578f1fc3e457302 400 SUPERFAMILY SSF53383 7 400 1.32E-102 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS00760 e0a74613e76c242ef578f1fc3e457302 400 PANTHER PTHR11751 15 398 2.7E-199 T 10-11-2016 CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 SUPERFAMILY SSF103039 17 121 8.11E-5 T 10-11-2016 IPR028976 CheC-like domain CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 197 272 5.0E-26 T 10-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 PANTHER PTHR30034 193 280 1.2E-15 T 10-11-2016 CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 269 6.3E-21 T 10-11-2016 IPR001543 Surface presentation of antigen (SpoA) CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 PRINTS PR00956 Flagellar motor switch protein FliN signature 200 216 2.9E-16 T 10-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 PRINTS PR00956 Flagellar motor switch protein FliN signature 217 233 2.9E-16 T 10-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 PRINTS PR00956 Flagellar motor switch protein FliN signature 233 246 2.9E-16 T 10-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 PRINTS PR00956 Flagellar motor switch protein FliN signature 246 261 2.9E-16 T 10-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 Gene3D G3DSA:2.30.330.10 193 280 1.7E-29 T 10-11-2016 CJM129_RS00310 bd40a324a5169bfaaddd300e7fa0e5ec 280 SUPERFAMILY SSF101801 197 278 2.49E-21 T 10-11-2016 IPR001543 Surface presentation of antigen (SpoA) CJM129_RS07380 2194717aa47292730bc0ad5cf770ad9e 200 Pfam PF01725 Ham1 family 3 188 1.9E-50 T 10-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CJM129_RS07380 2194717aa47292730bc0ad5cf770ad9e 200 PANTHER PTHR11067 1 189 2.8E-50 T 10-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CJM129_RS07380 2194717aa47292730bc0ad5cf770ad9e 200 PANTHER PTHR11067:SF9 1 189 2.8E-50 T 10-11-2016 CJM129_RS07380 2194717aa47292730bc0ad5cf770ad9e 200 Gene3D G3DSA:3.90.950.10 1 194 1.4E-62 T 10-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CJM129_RS07380 2194717aa47292730bc0ad5cf770ad9e 200 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 195 45.134 T 10-11-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CJM129_RS07380 2194717aa47292730bc0ad5cf770ad9e 200 SUPERFAMILY SSF52972 1 191 5.67E-56 T 10-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CJM129_RS07380 2194717aa47292730bc0ad5cf770ad9e 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 190 8.5E-50 T 10-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 CJM129_RS01570 85cfa624fa37a3aca7fc2f7c0dce4db7 48 Pfam PF01783 Ribosomal L32p protein family 2 44 1.1E-10 T 10-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CJM129_RS01570 85cfa624fa37a3aca7fc2f7c0dce4db7 48 SUPERFAMILY SSF57829 1 47 1.46E-10 T 10-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 CJM129_RS01570 85cfa624fa37a3aca7fc2f7c0dce4db7 48 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 48 13.161 T 10-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CJM129_RS01570 85cfa624fa37a3aca7fc2f7c0dce4db7 48 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 48 6.1E-14 T 10-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 SUPERFAMILY SSF53383 9 426 4.81E-118 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 Pfam PF00202 Aminotransferase class-III 24 423 2.8E-112 T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 Gene3D G3DSA:3.90.1150.10 5 64 2.4E-49 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 Gene3D G3DSA:3.90.1150.10 332 426 2.4E-49 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 PANTHER PTHR11986 1 427 1.3E-174 T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 Gene3D G3DSA:3.40.640.10 65 330 1.1E-79 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 423 3.8E-158 T 10-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 PIRSF PIRSF000521 19 427 2.7E-21 T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 PANTHER PTHR11986:SF8 1 427 1.3E-174 T 10-11-2016 CJM129_RS01455 c45972457d897bdf6eb502af8f66b959 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 240 277 - T 10-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJM129_RS07720 c95d22d2ffb7e55c6fd11affaf289197 260 Pfam PF01061 ABC-2 type transporter 5 218 5.8E-14 T 10-11-2016 IPR013525 ABC-2 type transporter GO:0016020 CJM129_RS07720 c95d22d2ffb7e55c6fd11affaf289197 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 25 46 6.2E-8 T 10-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJM129_RS07720 c95d22d2ffb7e55c6fd11affaf289197 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 175 194 6.2E-8 T 10-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJM129_RS07720 c95d22d2ffb7e55c6fd11affaf289197 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 138 162 6.2E-8 T 10-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJM129_RS07720 c95d22d2ffb7e55c6fd11affaf289197 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 195 214 6.2E-8 T 10-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.64 T 10-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 PANTHER PTHR23105 19 231 1.0E-78 T 10-11-2016 CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 Pfam PF00687 Ribosomal protein L1p/L10e family 33 220 3.7E-56 T 10-11-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 Gene3D G3DSA:3.30.190.20 161 226 3.7E-44 T 10-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 Gene3D G3DSA:3.30.190.20 17 68 3.7E-44 T 10-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 10-11-2016 IPR023673 Ribosomal protein L1, conserved site CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 5.0E-107 T 10-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 SUPERFAMILY SSF56808 6 225 3.27E-81 T 10-11-2016 IPR023674 Ribosomal protein L1-like CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 Gene3D G3DSA:3.40.50.790 69 159 2.2E-41 T 10-11-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 PIRSF PIRSF002155 1 227 3.5E-79 T 10-11-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 CJM129_RS02330 0faff457b5f1bd544b40a1c266f42bd4 233 PANTHER PTHR23105:SF5 19 231 1.0E-78 T 10-11-2016 CJM129_RS08120 457946106712bca146f89e10e030b9c2 329 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 320 1.2E-121 T 10-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS08120 457946106712bca146f89e10e030b9c2 329 Gene3D G3DSA:3.90.650.10 171 324 3.0E-50 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS08120 457946106712bca146f89e10e030b9c2 329 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 329 40.195 T 10-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS08120 457946106712bca146f89e10e030b9c2 329 PANTHER PTHR10520 1 326 8.2E-160 T 10-11-2016 CJM129_RS08120 457946106712bca146f89e10e030b9c2 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 159 1.1E-12 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS08120 457946106712bca146f89e10e030b9c2 329 SUPERFAMILY SSF56042 169 325 9.42E-44 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS08120 457946106712bca146f89e10e030b9c2 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 320 2.7E-26 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS08120 457946106712bca146f89e10e030b9c2 329 SUPERFAMILY SSF55326 3 164 1.15E-46 T 10-11-2016 CJM129_RS08120 457946106712bca146f89e10e030b9c2 329 Gene3D G3DSA:3.30.1330.10 18 165 1.4E-55 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS06175 038f3c7cfa1359eb72eb9d060900fd06 416 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 395 9.4E-29 T 10-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 CJM129_RS06175 038f3c7cfa1359eb72eb9d060900fd06 416 PANTHER PTHR19271 242 411 1.8E-116 T 10-11-2016 CJM129_RS06175 038f3c7cfa1359eb72eb9d060900fd06 416 PANTHER PTHR19271 7 226 1.8E-116 T 10-11-2016 CJM129_RS06175 038f3c7cfa1359eb72eb9d060900fd06 416 Pfam PF00033 Cytochrome b/b6/petB 30 215 1.9E-56 T 10-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CJM129_RS06175 038f3c7cfa1359eb72eb9d060900fd06 416 SUPERFAMILY SSF81648 241 388 1.83E-36 T 10-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 CJM129_RS06175 038f3c7cfa1359eb72eb9d060900fd06 416 SUPERFAMILY SSF81342 12 289 7.53E-80 T 10-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 CJM129_RS06175 038f3c7cfa1359eb72eb9d060900fd06 416 Gene3D G3DSA:1.20.810.10 12 414 8.8E-128 T 10-11-2016 IPR027387 Cytochrome b/b6-like domain CJM129_RS07065 ddaf68e6e1350b0e69d13c4ed459fcd3 248 PANTHER PTHR21235 1 248 3.2E-68 T 10-11-2016 CJM129_RS07065 ddaf68e6e1350b0e69d13c4ed459fcd3 248 SUPERFAMILY SSF51366 1 246 4.58E-61 T 10-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJM129_RS07065 ddaf68e6e1350b0e69d13c4ed459fcd3 248 Gene3D G3DSA:3.20.20.70 5 247 9.6E-72 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS07065 ddaf68e6e1350b0e69d13c4ed459fcd3 248 Pfam PF00977 Histidine biosynthesis protein 5 230 3.9E-59 T 10-11-2016 IPR006062 Histidine biosynthesis GO:0000105 CJM129_RS07065 ddaf68e6e1350b0e69d13c4ed459fcd3 248 PANTHER PTHR21235:SF2 1 248 3.2E-68 T 10-11-2016 CJM129_RS07065 ddaf68e6e1350b0e69d13c4ed459fcd3 248 TIGRFAM TIGR03572 WbuZ: glycosyl amidation-associated protein WbuZ 1 226 1.5E-90 T 10-11-2016 IPR020021 Glycosyl amidation-associated protein, WbuZ GO:0016833 UniPathway: UPA00031 CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 PANTHER PTHR30081 1 322 5.1E-75 T 10-11-2016 CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 1.3E-82 T 10-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 Pfam PF07549 SecD/SecF GG Motif 34 59 8.2E-8 T 10-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 115 280 4.3E-54 T 10-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 SUPERFAMILY SSF82866 117 291 2.49E-38 T 10-11-2016 CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 26.685 T 10-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 Pfam PF02355 Protein export membrane protein 109 291 7.5E-68 T 10-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 Gene3D G3DSA:1.20.1640.10 126 291 3.5E-29 T 10-11-2016 CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 5.0E-30 T 10-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 5.0E-30 T 10-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 5.0E-30 T 10-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJM129_RS05725 a86e3c5ab104b8e5cd70b9ef040c2db5 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 5.0E-30 T 10-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 PIRSF PIRSF036407 1 308 2.2E-108 T 10-11-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 Gene3D G3DSA:3.30.1330.10 3 127 2.4E-21 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 Gene3D G3DSA:3.90.650.10 140 306 4.1E-18 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 Pfam PF02769 AIR synthase related protein, C-terminal domain 134 307 1.0E-35 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 Hamap MF_00625 Selenide, water dikinase [selD]. 1 308 34.894 T 10-11-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 SUPERFAMILY SSF55326 8 126 5.23E-32 T 10-11-2016 CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 TIGRFAM TIGR00476 selD: selenide, water dikinase 3 276 5.9E-94 T 10-11-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 PANTHER PTHR10256 5 307 2.1E-81 T 10-11-2016 CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 SUPERFAMILY SSF56042 128 302 6.73E-45 T 10-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain CJM129_RS07995 b4ce520b382dd7d0076c0ef5abe241df 308 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 122 5.2E-17 T 10-11-2016 IPR016188 PurM-like, N-terminal domain CJM129_RS03065 8e96df2a989e4153051f58182773cb4d 257 PANTHER PTHR32039 12 215 3.8E-41 T 10-11-2016 CJM129_RS03065 8e96df2a989e4153051f58182773cb4d 257 Gene3D G3DSA:3.40.50.450 35 176 1.8E-9 T 10-11-2016 CJM129_RS03065 8e96df2a989e4153051f58182773cb4d 257 Pfam PF02481 DNA recombination-mediator protein A 9 197 1.4E-54 T 10-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 CJM129_RS03065 8e96df2a989e4153051f58182773cb4d 257 SUPERFAMILY SSF102405 14 178 5.68E-22 T 10-11-2016 CJM129_RS03065 8e96df2a989e4153051f58182773cb4d 257 PANTHER PTHR32039:SF8 12 215 3.8E-41 T 10-11-2016 CJM129_RS04610 bb7948e58df73c9980d5d0e8472fb80e 144 Pfam PF03724 META domain 47 138 1.5E-18 T 10-11-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 SUPERFAMILY SSF50615 2 77 4.19E-22 T 10-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 PANTHER PTHR15184:SF8 1 463 0.0 T 10-11-2016 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 SUPERFAMILY SSF47917 348 464 3.14E-54 T 10-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 SMART SM00382 144 322 1.2E-4 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 463 55.505 T 10-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 SUPERFAMILY SSF52540 79 350 2.43E-92 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 Gene3D G3DSA:1.10.1140.10 348 464 3.3E-58 T 10-11-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 PANTHER PTHR15184 1 463 0.0 T 10-11-2016 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 10-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 345 2.3E-65 T 10-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 Gene3D G3DSA:2.40.10.170 2 77 2.3E-27 T 10-11-2016 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 75 2.9E-18 T 10-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 Gene3D G3DSA:3.40.50.300 78 347 1.8E-110 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00545 11f935a38f42be9bfe9b170e3f6112b8 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 463 1.3E-257 T 10-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJM129_RS04660 68c2bf7aefa9632957e57a38595f4c9e 108 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 107 14.204 T 10-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CJM129_RS04660 68c2bf7aefa9632957e57a38595f4c9e 108 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 48 62 - T 10-11-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 CJM129_RS04660 68c2bf7aefa9632957e57a38595f4c9e 108 Gene3D G3DSA:3.30.230.10 5 105 4.3E-24 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS04660 68c2bf7aefa9632957e57a38595f4c9e 108 Pfam PF00825 Ribonuclease P 5 104 3.7E-23 T 10-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CJM129_RS04660 68c2bf7aefa9632957e57a38595f4c9e 108 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 10 97 6.0E-34 T 10-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CJM129_RS04660 68c2bf7aefa9632957e57a38595f4c9e 108 SUPERFAMILY SSF54211 3 106 2.35E-23 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS04660 68c2bf7aefa9632957e57a38595f4c9e 108 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 3 104 2.6E-19 T 10-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 PANTHER PTHR10264:SF78 134 306 6.4E-35 T 10-11-2016 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 PANTHER PTHR10264:SF78 46 114 6.4E-35 T 10-11-2016 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 PANTHER PTHR10264 46 114 6.4E-35 T 10-11-2016 IPR001972 Stomatin family GO:0016020 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 Pfam PF01145 SPFH domain / Band 7 family 64 264 1.6E-34 T 10-11-2016 IPR001107 Band 7 domain CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 PANTHER PTHR10264 134 306 6.4E-35 T 10-11-2016 IPR001972 Stomatin family GO:0016020 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 SUPERFAMILY SSF117892 92 251 9.15E-15 T 10-11-2016 IPR001107 Band 7 domain CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 PRINTS PR00679 Prohibitin signature 262 278 2.9E-16 T 10-11-2016 IPR000163 Prohibitin GO:0016020 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 PRINTS PR00679 Prohibitin signature 165 183 2.9E-16 T 10-11-2016 IPR000163 Prohibitin GO:0016020 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 PRINTS PR00679 Prohibitin signature 142 161 2.9E-16 T 10-11-2016 IPR000163 Prohibitin GO:0016020 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 PRINTS PR00679 Prohibitin signature 239 262 2.9E-16 T 10-11-2016 IPR000163 Prohibitin GO:0016020 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 PRINTS PR00679 Prohibitin signature 188 204 2.9E-16 T 10-11-2016 IPR000163 Prohibitin GO:0016020 CJM129_RS01285 5d0535634c273c9bcebbc3ffa9b78814 362 SMART SM00244 60 244 3.0E-26 T 10-11-2016 IPR001107 Band 7 domain CJM129_RS07705 44f3c55175157d188e56e79fe64b4c02 552 Pfam PF02563 Polysaccharide biosynthesis/export protein 80 147 1.0E-10 T 10-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CJM129_RS07705 44f3c55175157d188e56e79fe64b4c02 552 PANTHER PTHR33619 61 505 2.8E-29 T 10-11-2016 CJM129_RS07705 44f3c55175157d188e56e79fe64b4c02 552 Pfam PF10531 SLBB domain 457 501 3.5E-4 T 10-11-2016 IPR019554 Soluble ligand binding domain CJM129_RS07705 44f3c55175157d188e56e79fe64b4c02 552 Pfam PF10531 SLBB domain 161 210 4.9E-4 T 10-11-2016 IPR019554 Soluble ligand binding domain CJM129_RS07705 44f3c55175157d188e56e79fe64b4c02 552 Gene3D G3DSA:3.10.560.10 441 503 3.2E-11 T 10-11-2016 CJM129_RS07705 44f3c55175157d188e56e79fe64b4c02 552 Gene3D G3DSA:3.10.560.10 155 238 1.1E-10 T 10-11-2016 CJM129_RS07705 44f3c55175157d188e56e79fe64b4c02 552 Gene3D G3DSA:3.30.1950.10 87 145 1.1E-7 T 10-11-2016 CJM129_RS07705 44f3c55175157d188e56e79fe64b4c02 552 PANTHER PTHR33619:SF1 61 505 2.8E-29 T 10-11-2016 CJM129_RS08015 abdc376de879dba62be25e55c796bb46 260 PANTHER PTHR30592:SF1 7 258 1.2E-64 T 10-11-2016 CJM129_RS08015 abdc376de879dba62be25e55c796bb46 260 Gene3D G3DSA:3.10.20.10 27 107 1.9E-18 T 10-11-2016 CJM129_RS08015 abdc376de879dba62be25e55c796bb46 260 PANTHER PTHR30592 7 258 1.2E-64 T 10-11-2016 CJM129_RS08015 abdc376de879dba62be25e55c796bb46 260 SUPERFAMILY SSF53927 4 258 5.72E-68 T 10-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 CJM129_RS08015 abdc376de879dba62be25e55c796bb46 260 Gene3D G3DSA:3.40.140.10 123 259 6.0E-46 T 10-11-2016 CJM129_RS08015 abdc376de879dba62be25e55c796bb46 260 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 21 259 5.1E-54 T 10-11-2016 IPR003786 Protein FdhD GO:0016783 CJM129_RS08015 abdc376de879dba62be25e55c796bb46 260 PIRSF PIRSF015626 5 260 1.2E-82 T 10-11-2016 IPR003786 Protein FdhD GO:0016783 CJM129_RS08015 abdc376de879dba62be25e55c796bb46 260 Pfam PF02634 FdhD/NarQ family 25 259 1.6E-73 T 10-11-2016 IPR003786 Protein FdhD GO:0016783 CJM129_RS06460 9b503eb8c9712cc0d489218ecb26bd7f 399 Pfam PF07690 Major Facilitator Superfamily 11 317 1.5E-29 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS06460 9b503eb8c9712cc0d489218ecb26bd7f 399 Gene3D G3DSA:1.20.1250.20 5 187 7.0E-21 T 10-11-2016 CJM129_RS06460 9b503eb8c9712cc0d489218ecb26bd7f 399 Gene3D G3DSA:1.20.1250.20 204 385 1.9E-14 T 10-11-2016 CJM129_RS06460 9b503eb8c9712cc0d489218ecb26bd7f 399 PANTHER PTHR23501 7 385 6.5E-83 T 10-11-2016 CJM129_RS06460 9b503eb8c9712cc0d489218ecb26bd7f 399 PANTHER PTHR23501:SF4 7 385 6.5E-83 T 10-11-2016 CJM129_RS06460 9b503eb8c9712cc0d489218ecb26bd7f 399 SUPERFAMILY SSF103473 5 386 2.49E-50 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 SUPERFAMILY SSF52949 59 135 1.0E-10 T 10-11-2016 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 162 471 6.4E-103 T 10-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 Gene3D G3DSA:3.40.630.10 157 480 2.2E-120 T 10-11-2016 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 324 331 - T 10-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 SUPERFAMILY SSF53187 158 478 3.14E-107 T 10-11-2016 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 480 32.196 T 10-11-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 Gene3D G3DSA:3.40.220.10 58 156 2.7E-17 T 10-11-2016 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 PANTHER PTHR11963 65 478 1.9E-151 T 10-11-2016 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 PRINTS PR00481 Cytosol aminopeptidase signature 261 282 4.8E-48 T 10-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 PRINTS PR00481 Cytosol aminopeptidase signature 239 256 4.8E-48 T 10-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 PRINTS PR00481 Cytosol aminopeptidase signature 298 319 4.8E-48 T 10-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 PRINTS PR00481 Cytosol aminopeptidase signature 320 340 4.8E-48 T 10-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJM129_RS04480 327a75c639fb216b867f9823acc11c4e 483 PRINTS PR00481 Cytosol aminopeptidase signature 348 363 4.8E-48 T 10-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJM129_RS03475 8b0f343a284339d903ba36db070de005 210 PIRSF PIRSF004848 2 210 1.3E-56 T 10-11-2016 IPR011078 Uncharacterised protein family UPF0001 CJM129_RS03475 8b0f343a284339d903ba36db070de005 210 Gene3D G3DSA:3.20.20.10 8 208 4.4E-59 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS03475 8b0f343a284339d903ba36db070de005 210 SUPERFAMILY SSF51419 9 206 4.06E-58 T 10-11-2016 IPR029066 PLP-binding barrel CJM129_RS03475 8b0f343a284339d903ba36db070de005 210 Pfam PF01168 Alanine racemase, N-terminal domain 13 207 5.1E-14 T 10-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 CJM129_RS03475 8b0f343a284339d903ba36db070de005 210 PANTHER PTHR10146 11 206 3.8E-57 T 10-11-2016 IPR011078 Uncharacterised protein family UPF0001 CJM129_RS03475 8b0f343a284339d903ba36db070de005 210 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 8 208 5.0E-53 T 10-11-2016 IPR011078 Uncharacterised protein family UPF0001 CJM129_RS03475 8b0f343a284339d903ba36db070de005 210 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 62 76 - T 10-11-2016 IPR011078 Uncharacterised protein family UPF0001 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 SUPERFAMILY SSF50486 203 303 6.87E-20 T 10-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 PANTHER PTHR11138 2 299 5.9E-79 T 10-11-2016 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 10-11-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 SUPERFAMILY SSF53328 3 205 9.81E-50 T 10-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 Pfam PF02911 Formyl transferase, C-terminal domain 202 296 5.7E-20 T 10-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 Gene3D G3DSA:3.40.50.170 3 203 8.1E-54 T 10-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 Gene3D G3DSA:3.10.25.10 205 304 1.4E-18 T 10-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 299 5.7E-74 T 10-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 Pfam PF00551 Formyl transferase 2 165 4.3E-35 T 10-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS00500 6b309f3f1fa1279a9cbf0a00999eaf5d 305 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 299 30.016 T 10-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJM129_RS03420 7e1c70985b4993f5a81810f3edfb766c 250 SUPERFAMILY SSF55120 55 236 6.72E-42 T 10-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03420 7e1c70985b4993f5a81810f3edfb766c 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 89 103 - T 10-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03420 7e1c70985b4993f5a81810f3edfb766c 250 Pfam PF00849 RNA pseudouridylate synthase 73 195 1.1E-23 T 10-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJM129_RS03420 7e1c70985b4993f5a81810f3edfb766c 250 PANTHER PTHR11079:SF84 48 241 5.6E-33 T 10-11-2016 CJM129_RS03420 7e1c70985b4993f5a81810f3edfb766c 250 PANTHER PTHR11079 48 241 5.6E-33 T 10-11-2016 CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PANTHER PTHR24322 7 125 3.4E-36 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PANTHER PTHR24322 152 184 3.4E-36 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 SUPERFAMILY SSF51735 3 240 4.79E-55 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 Gene3D G3DSA:3.40.50.720 3 240 5.0E-69 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.4E-10 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 5.4E-10 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.4E-10 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 3.8E-25 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.8E-25 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.8E-25 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.8E-25 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.8E-25 T 10-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 238 2.0E-39 T 10-11-2016 CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PANTHER PTHR24322:SF513 7 125 3.4E-36 T 10-11-2016 CJM129_RS07675 6b6068e5b3608bffb308c42e460f647f 243 PANTHER PTHR24322:SF513 152 184 3.4E-36 T 10-11-2016 CJM129_RS05875 5de364a877fb2103c7c5bb09049f67ba 196 Gene3D G3DSA:2.160.10.10 71 194 7.6E-28 T 10-11-2016 CJM129_RS05875 5de364a877fb2103c7c5bb09049f67ba 196 PANTHER PTHR23416:SF23 53 194 9.3E-13 T 10-11-2016 CJM129_RS05875 5de364a877fb2103c7c5bb09049f67ba 196 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 193 3.4E-53 T 10-11-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like CJM129_RS05875 5de364a877fb2103c7c5bb09049f67ba 196 SUPERFAMILY SSF51161 6 193 7.07E-41 T 10-11-2016 IPR011004 Trimeric LpxA-like CJM129_RS05875 5de364a877fb2103c7c5bb09049f67ba 196 PANTHER PTHR23416 53 194 9.3E-13 T 10-11-2016 CJM129_RS05875 5de364a877fb2103c7c5bb09049f67ba 196 Gene3D G3DSA:3.40.50.20 4 70 2.2E-29 T 10-11-2016 IPR016185 Pre-ATP-grasp domain CJM129_RS05875 5de364a877fb2103c7c5bb09049f67ba 196 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 144 177 2.7E-6 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS04455 056bdf79582adfddf2b8a06aa2b11894 184 PANTHER PTHR24421:SF16 2 177 2.6E-28 T 10-11-2016 CJM129_RS04455 056bdf79582adfddf2b8a06aa2b11894 184 Gene3D G3DSA:3.40.50.180 2 182 5.1E-43 T 10-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJM129_RS04455 056bdf79582adfddf2b8a06aa2b11894 184 PANTHER PTHR24421 2 177 2.6E-28 T 10-11-2016 CJM129_RS04455 056bdf79582adfddf2b8a06aa2b11894 184 SUPERFAMILY SSF52738 2 183 7.98E-46 T 10-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJM129_RS04455 056bdf79582adfddf2b8a06aa2b11894 184 Pfam PF01339 CheB methylesterase 4 177 4.7E-39 T 10-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJM129_RS01675 748d8d624420a6a5f1f8416ab261bf10 102 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 19 90 8.7E-23 T 10-11-2016 IPR001543 Surface presentation of antigen (SpoA) CJM129_RS01675 748d8d624420a6a5f1f8416ab261bf10 102 Gene3D G3DSA:2.30.330.10 16 97 1.5E-26 T 10-11-2016 CJM129_RS01675 748d8d624420a6a5f1f8416ab261bf10 102 SUPERFAMILY SSF101801 17 92 4.45E-21 T 10-11-2016 IPR001543 Surface presentation of antigen (SpoA) CJM129_RS01675 748d8d624420a6a5f1f8416ab261bf10 102 PRINTS PR00956 Flagellar motor switch protein FliN signature 65 80 3.6E-22 T 10-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJM129_RS01675 748d8d624420a6a5f1f8416ab261bf10 102 PRINTS PR00956 Flagellar motor switch protein FliN signature 52 65 3.6E-22 T 10-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJM129_RS01675 748d8d624420a6a5f1f8416ab261bf10 102 PRINTS PR00956 Flagellar motor switch protein FliN signature 19 35 3.6E-22 T 10-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJM129_RS01675 748d8d624420a6a5f1f8416ab261bf10 102 PRINTS PR00956 Flagellar motor switch protein FliN signature 36 52 3.6E-22 T 10-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJM129_RS05840 b9e71b0f7fd53e00fa0953fbcaed8c0c 205 PANTHER PTHR35809 13 198 2.0E-12 T 10-11-2016 CJM129_RS05840 b9e71b0f7fd53e00fa0953fbcaed8c0c 205 Pfam PF02666 Phosphatidylserine decarboxylase 44 203 7.6E-7 T 10-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CJM129_RS00410 a69288107c4aeec1307a653c79041e2e 268 SUPERFAMILY SSF50370 104 262 1.1E-46 T 10-11-2016 IPR000772 Ricin B, lectin domain CJM129_RS00410 a69288107c4aeec1307a653c79041e2e 268 PRINTS PR01387 Cytolethal distending toxin A signature 203 217 8.0E-10 T 10-11-2016 IPR015957 Cytolethal distending toxin A CJM129_RS00410 a69288107c4aeec1307a653c79041e2e 268 PRINTS PR01387 Cytolethal distending toxin A signature 166 178 8.0E-10 T 10-11-2016 IPR015957 Cytolethal distending toxin A CJM129_RS00410 a69288107c4aeec1307a653c79041e2e 268 PRINTS PR01387 Cytolethal distending toxin A signature 123 140 8.0E-10 T 10-11-2016 IPR015957 Cytolethal distending toxin A CJM129_RS00410 a69288107c4aeec1307a653c79041e2e 268 Pfam PF03498 Cytolethal distending toxin A/C domain 116 260 1.3E-45 T 10-11-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 CJM129_RS00410 a69288107c4aeec1307a653c79041e2e 268 PIRSF PIRSF036516 1 268 8.5E-109 T 10-11-2016 IPR015957 Cytolethal distending toxin A CJM129_RS00410 a69288107c4aeec1307a653c79041e2e 268 Gene3D G3DSA:2.80.10.50 99 262 3.4E-55 T 10-11-2016 CJM129_RS06615 cfe2331ddebf885562a61495bbe3d723 74 SMART SM01409 11 66 3.2E-11 T 10-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS06615 cfe2331ddebf885562a61495bbe3d723 74 Gene3D G3DSA:3.90.940.10 13 68 4.7E-9 T 10-11-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS06615 cfe2331ddebf885562a61495bbe3d723 74 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 12 64 5.0E-7 T 10-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS06615 cfe2331ddebf885562a61495bbe3d723 74 SUPERFAMILY SSF63562 10 71 3.01E-16 T 10-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS06615 cfe2331ddebf885562a61495bbe3d723 74 Pfam PF01192 RNA polymerase Rpb6 18 65 1.7E-10 T 10-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS06615 cfe2331ddebf885562a61495bbe3d723 74 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 5 67 14.554 T 10-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJM129_RS05060 3070c1a8db2d51ce1450162643b37f7a 299 Gene3D G3DSA:2.60.200.20 21 107 1.1E-6 T 10-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CJM129_RS05060 3070c1a8db2d51ce1450162643b37f7a 299 SUPERFAMILY SSF49879 19 107 2.06E-9 T 10-11-2016 IPR008984 SMAD/FHA domain GO:0005515 CJM129_RS05060 3070c1a8db2d51ce1450162643b37f7a 299 Pfam PF00498 FHA domain 32 100 6.6E-5 T 10-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 CJM129_RS07440 a5988ecbb246443d97d796e581a8e0c5 218 PANTHER PTHR35568:SF1 15 218 1.7E-32 T 10-11-2016 CJM129_RS07440 a5988ecbb246443d97d796e581a8e0c5 218 Pfam PF08348 YheO-like PAS domain 8 115 2.7E-28 T 10-11-2016 IPR013559 YheO-like CJM129_RS07440 a5988ecbb246443d97d796e581a8e0c5 218 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 8 121 4.0E-62 T 10-11-2016 IPR013559 YheO-like CJM129_RS07440 a5988ecbb246443d97d796e581a8e0c5 218 PANTHER PTHR35568 15 218 1.7E-32 T 10-11-2016 CJM129_RS07440 a5988ecbb246443d97d796e581a8e0c5 218 Pfam PF13309 HTH domain 170 214 8.5E-17 T 10-11-2016 CJM129_RS01290 23d75732be8c34b42e6ceaf9afe84ff6 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 8 304 1.4E-138 T 10-11-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 CJM129_RS01290 23d75732be8c34b42e6ceaf9afe84ff6 304 Gene3D G3DSA:3.20.10.10 132 293 2.9E-55 T 10-11-2016 CJM129_RS01290 23d75732be8c34b42e6ceaf9afe84ff6 304 SUPERFAMILY SSF56752 5 301 7.98E-94 T 10-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CJM129_RS01290 23d75732be8c34b42e6ceaf9afe84ff6 304 PANTHER PTHR11825:SF7 7 303 2.0E-102 T 10-11-2016 CJM129_RS01290 23d75732be8c34b42e6ceaf9afe84ff6 304 Gene3D G3DSA:3.30.470.10 5 128 6.9E-35 T 10-11-2016 CJM129_RS01290 23d75732be8c34b42e6ceaf9afe84ff6 304 Pfam PF01063 Amino-transferase class IV 34 265 4.8E-42 T 10-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CJM129_RS01290 23d75732be8c34b42e6ceaf9afe84ff6 304 PANTHER PTHR11825 7 303 2.0E-102 T 10-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 CJM129_RS01425 88b94f667c32ba1def742dab39e88071 222 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 218 3.3E-65 T 10-11-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CJM129_RS01425 88b94f667c32ba1def742dab39e88071 222 SUPERFAMILY SSF161098 2 215 1.31E-46 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS01425 88b94f667c32ba1def742dab39e88071 222 Gene3D G3DSA:1.10.3720.10 2 219 1.0E-40 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS01425 88b94f667c32ba1def742dab39e88071 222 PANTHER PTHR30183 1 222 1.5E-57 T 10-11-2016 CJM129_RS01425 88b94f667c32ba1def742dab39e88071 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 215 1.1E-17 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS07155 5d1b87ad5f30ebbba59dec79d4e50a2a 649 Gene3D G3DSA:3.90.1480.10 235 472 1.8E-13 T 10-11-2016 CJM129_RS07155 5d1b87ad5f30ebbba59dec79d4e50a2a 649 PANTHER PTHR41786:SF1 13 610 3.5E-12 T 10-11-2016 CJM129_RS07155 5d1b87ad5f30ebbba59dec79d4e50a2a 649 PANTHER PTHR41786 13 610 3.5E-12 T 10-11-2016 CJM129_RS07155 5d1b87ad5f30ebbba59dec79d4e50a2a 649 Pfam PF01973 Protein of unknown function DUF115 209 383 1.6E-43 T 10-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CJM129_RS03530 3de8f5776e04bad0716c73c3bd03ba20 279 PANTHER PTHR30193:SF20 6 275 1.8E-41 T 10-11-2016 CJM129_RS03530 3de8f5776e04bad0716c73c3bd03ba20 279 Gene3D G3DSA:1.10.3720.10 11 275 1.7E-35 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS03530 3de8f5776e04bad0716c73c3bd03ba20 279 SUPERFAMILY SSF161098 3 273 2.06E-39 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS03530 3de8f5776e04bad0716c73c3bd03ba20 279 PANTHER PTHR30193 6 275 1.8E-41 T 10-11-2016 CJM129_RS06010 c91feffcc153279bb6562dc388c7c9fa 172 Gene3D G3DSA:3.40.50.1000 1 165 4.3E-50 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06010 c91feffcc153279bb6562dc388c7c9fa 172 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 150 4.7E-52 T 10-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CJM129_RS06010 c91feffcc153279bb6562dc388c7c9fa 172 Pfam PF08645 Polynucleotide kinase 3 phosphatase 23 129 1.3E-8 T 10-11-2016 IPR013954 Polynucleotide kinase 3 phosphatase CJM129_RS06010 c91feffcc153279bb6562dc388c7c9fa 172 PANTHER PTHR23133 1 169 1.3E-45 T 10-11-2016 CJM129_RS06010 c91feffcc153279bb6562dc388c7c9fa 172 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 7.5E-34 T 10-11-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CJM129_RS06010 c91feffcc153279bb6562dc388c7c9fa 172 SUPERFAMILY SSF56784 1 166 7.73E-41 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS06010 c91feffcc153279bb6562dc388c7c9fa 172 PANTHER PTHR23133:SF3 1 169 1.3E-45 T 10-11-2016 CJM129_RS06010 c91feffcc153279bb6562dc388c7c9fa 172 PIRSF PIRSF004682 1 167 7.2E-55 T 10-11-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CJM129_RS06010 c91feffcc153279bb6562dc388c7c9fa 172 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 137 1.1E-30 T 10-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CJM129_RS05420 44e3bda9d93d1125a76baa81e1ae2181 424 Gene3D G3DSA:1.20.1600.10 32 415 5.1E-43 T 10-11-2016 CJM129_RS05420 44e3bda9d93d1125a76baa81e1ae2181 424 SUPERFAMILY SSF56954 32 418 1.7E-54 T 10-11-2016 CJM129_RS05420 44e3bda9d93d1125a76baa81e1ae2181 424 PANTHER PTHR30026 9 418 9.0E-19 T 10-11-2016 CJM129_RS05420 44e3bda9d93d1125a76baa81e1ae2181 424 Pfam PF02321 Outer membrane efflux protein 225 412 1.9E-26 T 10-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJM129_RS05420 44e3bda9d93d1125a76baa81e1ae2181 424 Pfam PF02321 Outer membrane efflux protein 27 205 1.3E-22 T 10-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 PANTHER PTHR11616 1 447 2.6E-149 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 Pfam PF00209 Sodium:neurotransmitter symporter family 3 110 2.6E-22 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 Pfam PF00209 Sodium:neurotransmitter symporter family 147 446 6.1E-38 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 SUPERFAMILY SSF161070 3 446 1.31E-121 T 10-11-2016 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 4.9E-19 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 4.9E-19 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 426 446 4.9E-19 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 81 107 4.9E-19 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 384 404 4.9E-19 T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 10-11-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 CJM129_RS02910 ed15fc36ccfe614d7b84f0fade29c1a3 447 PANTHER PTHR11616:SF167 1 447 2.6E-149 T 10-11-2016 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SUPERFAMILY SSF50249 373 453 3.8E-22 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Gene3D G3DSA:2.40.50.140 117 183 3.3E-9 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 PRINTS PR00681 Ribosomal protein S1 signature 52 66 4.4E-32 T 10-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 PRINTS PR00681 Ribosomal protein S1 signature 301 320 4.4E-32 T 10-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 PRINTS PR00681 Ribosomal protein S1 signature 341 359 4.4E-32 T 10-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 PRINTS PR00681 Ribosomal protein S1 signature 95 114 4.4E-32 T 10-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 PRINTS PR00681 Ribosomal protein S1 signature 166 186 4.4E-32 T 10-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 PRINTS PR00681 Ribosomal protein S1 signature 34 52 4.4E-32 T 10-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 PRINTS PR00681 Ribosomal protein S1 signature 223 244 4.4E-32 T 10-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SUPERFAMILY SSF50249 457 550 8.95E-19 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SMART SM00316 116 182 6.0E-5 T 10-11-2016 IPR022967 RNA-binding domain, S1 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SMART SM00316 286 358 4.9E-25 T 10-11-2016 IPR022967 RNA-binding domain, S1 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SMART SM00316 373 443 1.0E-24 T 10-11-2016 IPR022967 RNA-binding domain, S1 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SMART SM00316 458 525 6.0E-20 T 10-11-2016 IPR022967 RNA-binding domain, S1 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SMART SM00316 201 271 5.2E-22 T 10-11-2016 IPR022967 RNA-binding domain, S1 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SMART SM00316 32 98 8.4E-9 T 10-11-2016 IPR022967 RNA-binding domain, S1 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 PANTHER PTHR10724 18 519 1.4E-132 T 10-11-2016 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SUPERFAMILY SSF50249 25 116 1.42E-12 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 PANTHER PTHR10724:SF6 18 519 1.4E-132 T 10-11-2016 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SUPERFAMILY SSF50249 271 361 2.2E-23 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Gene3D G3DSA:2.40.50.140 204 284 1.9E-25 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Gene3D G3DSA:2.40.50.140 36 116 1.4E-9 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Gene3D G3DSA:2.40.50.140 285 359 5.2E-26 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Gene3D G3DSA:2.40.50.140 365 444 3.9E-26 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Gene3D G3DSA:2.40.50.140 456 534 2.1E-18 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SUPERFAMILY SSF50249 116 187 1.4E-10 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 SUPERFAMILY SSF50249 203 283 2.06E-22 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Pfam PF00575 S1 RNA binding domain 202 271 8.7E-19 T 10-11-2016 IPR003029 S1 domain GO:0003676 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Pfam PF00575 S1 RNA binding domain 117 182 1.6E-6 T 10-11-2016 IPR003029 S1 domain GO:0003676 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Pfam PF00575 S1 RNA binding domain 287 358 1.3E-20 T 10-11-2016 IPR003029 S1 domain GO:0003676 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Pfam PF00575 S1 RNA binding domain 373 443 2.7E-20 T 10-11-2016 IPR003029 S1 domain GO:0003676 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Pfam PF00575 S1 RNA binding domain 33 87 1.6E-5 T 10-11-2016 IPR003029 S1 domain GO:0003676 CJM129_RS04305 3946fa6fb2b2ac9b12e33c520e0e1da1 556 Pfam PF00575 S1 RNA binding domain 457 525 7.5E-13 T 10-11-2016 IPR003029 S1 domain GO:0003676 CJM129_RS04565 6506e602aaaa1bba60ddf95da8a1aa04 401 PANTHER PTHR30489 5 401 1.8E-54 T 10-11-2016 CJM129_RS04565 6506e602aaaa1bba60ddf95da8a1aa04 401 Pfam PF02687 FtsX-like permease family 269 393 7.3E-18 T 10-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CJM129_RS06410 ff5cfc4a08cd3cf9f21ad7abf3ffa1eb 541 Pfam PF00999 Sodium/hydrogen exchanger family 9 371 1.9E-59 T 10-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CJM129_RS06410 ff5cfc4a08cd3cf9f21ad7abf3ffa1eb 541 PANTHER PTHR16254 2 533 1.7E-115 T 10-11-2016 CJM129_RS06410 ff5cfc4a08cd3cf9f21ad7abf3ffa1eb 541 SUPERFAMILY SSF51735 399 536 1.18E-18 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06410 ff5cfc4a08cd3cf9f21ad7abf3ffa1eb 541 Pfam PF02254 TrkA-N domain 405 501 3.9E-12 T 10-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CJM129_RS06410 ff5cfc4a08cd3cf9f21ad7abf3ffa1eb 541 Gene3D G3DSA:3.40.50.720 399 533 2.0E-20 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02195 df48b7731a9e450707a4b6cf1b7d39c0 430 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 3 421 9.9E-173 T 10-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CJM129_RS02195 df48b7731a9e450707a4b6cf1b7d39c0 430 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 2 425 53.081 T 10-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CJM129_RS02195 df48b7731a9e450707a4b6cf1b7d39c0 430 PANTHER PTHR30557 1 426 2.2E-236 T 10-11-2016 CJM129_RS02195 df48b7731a9e450707a4b6cf1b7d39c0 430 Pfam PF01964 Radical SAM ThiC family 3 419 8.3E-188 T 10-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 CJM129_RS02195 df48b7731a9e450707a4b6cf1b7d39c0 430 PANTHER PTHR30557:SF1 1 426 2.2E-236 T 10-11-2016 CJM129_RS06225 86e7fee8db186effe13c6726dfae80f7 392 SUPERFAMILY SSF51338 343 390 2.62E-14 T 10-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJM129_RS06225 86e7fee8db186effe13c6726dfae80f7 392 SUPERFAMILY SSF51338 2 45 2.62E-14 T 10-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJM129_RS06225 86e7fee8db186effe13c6726dfae80f7 392 SUPERFAMILY SSF51556 47 342 6.81E-47 T 10-11-2016 IPR032466 Metal-dependent hydrolase CJM129_RS06225 86e7fee8db186effe13c6726dfae80f7 392 PANTHER PTHR11647:SF70 1 391 2.0E-52 T 10-11-2016 CJM129_RS06225 86e7fee8db186effe13c6726dfae80f7 392 Gene3D G3DSA:3.20.20.140 51 361 6.5E-39 T 10-11-2016 CJM129_RS06225 86e7fee8db186effe13c6726dfae80f7 392 Pfam PF01979 Amidohydrolase family 224 387 1.8E-11 T 10-11-2016 IPR006680 Amidohydrolase-related GO:0016787 CJM129_RS06225 86e7fee8db186effe13c6726dfae80f7 392 PANTHER PTHR11647 1 391 2.0E-52 T 10-11-2016 CJM129_RS06225 86e7fee8db186effe13c6726dfae80f7 392 Gene3D G3DSA:2.30.40.10 1 50 4.6E-11 T 10-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 SUPERFAMILY SSF56053 83 175 2.16E-35 T 10-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.6E-32 T 10-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 PRINTS PR00059 Ribosomal protein L6 signature 140 161 2.6E-32 T 10-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.6E-32 T 10-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 Gene3D G3DSA:3.90.930.12 2 82 3.9E-22 T 10-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 SUPERFAMILY SSF56053 2 82 1.44E-18 T 10-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 PANTHER PTHR11655 1 178 4.0E-76 T 10-11-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 PIRSF PIRSF002162 1 176 2.5E-45 T 10-11-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 Gene3D G3DSA:3.90.930.12 83 176 7.4E-39 T 10-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 7.1E-70 T 10-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 10-11-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 Pfam PF00347 Ribosomal protein L6 11 82 4.2E-7 T 10-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 Pfam PF00347 Ribosomal protein L6 91 163 9.7E-20 T 10-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 PANTHER PTHR11655:SF14 1 178 4.0E-76 T 10-11-2016 CJM129_RS09020 d717a6741efb1a3b56b321a7c823c2e1 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 35.94 T 10-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJM129_RS01905 76ffbdbc62cd98f74d9221d3820ceda8 94 Gene3D G3DSA:3.80.10.10 4 51 2.7E-4 T 10-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like CJM129_RS01905 76ffbdbc62cd98f74d9221d3820ceda8 94 PANTHER PTHR15004 1 94 6.3E-17 T 10-11-2016 CJM129_RS01905 76ffbdbc62cd98f74d9221d3820ceda8 94 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 5.3E-20 T 10-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CJM129_RS01905 76ffbdbc62cd98f74d9221d3820ceda8 94 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 25 89 1.6E-12 T 10-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CJM129_RS01905 76ffbdbc62cd98f74d9221d3820ceda8 94 PANTHER PTHR15004:SF0 1 94 6.3E-17 T 10-11-2016 CJM129_RS01905 76ffbdbc62cd98f74d9221d3820ceda8 94 SUPERFAMILY SSF141000 2 92 2.09E-20 T 10-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CJM129_RS01905 76ffbdbc62cd98f74d9221d3820ceda8 94 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 94 20.964 T 10-11-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CJM129_RS08700 7ffb5c277661bfab7558f4bd712cc8cf 281 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 75 91 - T 10-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 CJM129_RS08700 7ffb5c277661bfab7558f4bd712cc8cf 281 PANTHER PTHR12001:SF23 26 275 1.0E-71 T 10-11-2016 CJM129_RS08700 7ffb5c277661bfab7558f4bd712cc8cf 281 SUPERFAMILY SSF48576 5 278 3.84E-69 T 10-11-2016 IPR008949 Isoprenoid synthase domain CJM129_RS08700 7ffb5c277661bfab7558f4bd712cc8cf 281 PANTHER PTHR12001 26 275 1.0E-71 T 10-11-2016 IPR017446 Polyprenyl synthetase-related CJM129_RS08700 7ffb5c277661bfab7558f4bd712cc8cf 281 Gene3D G3DSA:1.10.600.10 9 273 5.7E-76 T 10-11-2016 IPR008949 Isoprenoid synthase domain CJM129_RS08700 7ffb5c277661bfab7558f4bd712cc8cf 281 Pfam PF00348 Polyprenyl synthetase 25 271 1.2E-50 T 10-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 CJM129_RS08700 7ffb5c277661bfab7558f4bd712cc8cf 281 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 205 217 - T 10-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 SUPERFAMILY SSF50447 169 258 8.84E-15 T 10-11-2016 IPR009000 Translation protein, beta-barrel domain CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 Pfam PF09107 Elongation factor SelB, winged helix 556 598 2.2E-10 T 10-11-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 PANTHER PTHR23115 2 363 8.8E-79 T 10-11-2016 CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 Gene3D G3DSA:2.40.30.10 175 288 1.5E-18 T 10-11-2016 CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 160 4.2E-13 T 10-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 PANTHER PTHR23115:SF129 2 363 8.8E-79 T 10-11-2016 CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 597 1.4E-81 T 10-11-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 Pfam PF00009 Elongation factor Tu GTP binding domain 4 160 1.7E-25 T 10-11-2016 CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 SUPERFAMILY SSF46785 542 599 9.98E-13 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 Gene3D G3DSA:1.10.10.10 555 599 1.2E-11 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 SUPERFAMILY SSF52540 4 190 8.01E-41 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07400 4c58407d9e475060fcd9df75064d5261 601 Gene3D G3DSA:3.40.50.300 3 162 2.2E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05890 392315c4074f487f675436663f87d484 713 Pfam PF02516 Oligosaccharyl transferase STT3 subunit 11 477 1.6E-123 T 10-11-2016 IPR003674 Oligosaccharyl transferase, STT3 subunit GO:0004576|GO:0006486|GO:0016020 UniPathway: UPA00378 CJM129_RS08715 9fdc9f2e2e721c27b402ba561f452e42 240 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS08715 9fdc9f2e2e721c27b402ba561f452e42 240 SUPERFAMILY SSF52540 2 231 2.66E-58 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08715 9fdc9f2e2e721c27b402ba561f452e42 240 Pfam PF00005 ABC transporter 19 168 2.4E-30 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS08715 9fdc9f2e2e721c27b402ba561f452e42 240 PANTHER PTHR24220:SF483 4 227 7.4E-90 T 10-11-2016 CJM129_RS08715 9fdc9f2e2e721c27b402ba561f452e42 240 SMART SM00382 27 217 5.5E-11 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS08715 9fdc9f2e2e721c27b402ba561f452e42 240 Gene3D G3DSA:3.40.50.300 2 230 2.6E-63 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08715 9fdc9f2e2e721c27b402ba561f452e42 240 PANTHER PTHR24220 4 227 7.4E-90 T 10-11-2016 CJM129_RS00350 34a9549dffbcb716f073002036049092 409 Pfam PF01979 Amidohydrolase family 56 406 5.6E-61 T 10-11-2016 IPR006680 Amidohydrolase-related GO:0016787 CJM129_RS00350 34a9549dffbcb716f073002036049092 409 Gene3D G3DSA:3.20.20.140 61 361 2.2E-49 T 10-11-2016 CJM129_RS00350 34a9549dffbcb716f073002036049092 409 PANTHER PTHR11271:SF7 1 405 1.7E-29 T 10-11-2016 CJM129_RS00350 34a9549dffbcb716f073002036049092 409 Gene3D G3DSA:2.30.40.10 17 60 1.7E-4 T 10-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJM129_RS00350 34a9549dffbcb716f073002036049092 409 Gene3D G3DSA:2.30.40.10 363 405 1.7E-4 T 10-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJM129_RS00350 34a9549dffbcb716f073002036049092 409 SUPERFAMILY SSF51556 59 361 1.83E-52 T 10-11-2016 IPR032466 Metal-dependent hydrolase CJM129_RS00350 34a9549dffbcb716f073002036049092 409 PANTHER PTHR11271 1 405 1.7E-29 T 10-11-2016 CJM129_RS00350 34a9549dffbcb716f073002036049092 409 SUPERFAMILY SSF51338 3 72 8.63E-9 T 10-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJM129_RS07375 e9f300ea6500196e1ab223b2336710ca 823 Pfam PF03176 MMPL family 189 403 3.4E-15 T 10-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CJM129_RS07375 e9f300ea6500196e1ab223b2336710ca 823 Pfam PF03176 MMPL family 585 782 2.1E-10 T 10-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 CJM129_RS07375 e9f300ea6500196e1ab223b2336710ca 823 SUPERFAMILY SSF82866 594 809 1.29E-34 T 10-11-2016 CJM129_RS07375 e9f300ea6500196e1ab223b2336710ca 823 PANTHER PTHR33406 212 805 4.9E-35 T 10-11-2016 CJM129_RS07375 e9f300ea6500196e1ab223b2336710ca 823 Gene3D G3DSA:1.20.1640.10 208 414 2.5E-29 T 10-11-2016 CJM129_RS07375 e9f300ea6500196e1ab223b2336710ca 823 Gene3D G3DSA:1.20.1640.10 618 816 1.9E-35 T 10-11-2016 CJM129_RS07375 e9f300ea6500196e1ab223b2336710ca 823 SUPERFAMILY SSF82866 214 409 9.55E-23 T 10-11-2016 CJM129_RS05925 4e0c83d9f30f14ca08e2f633ad636a31 342 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 294 3.6E-38 T 10-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CJM129_RS05925 4e0c83d9f30f14ca08e2f633ad636a31 342 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 312 1.9E-65 T 10-11-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 CJM129_RS05925 4e0c83d9f30f14ca08e2f633ad636a31 342 Gene3D G3DSA:3.40.50.2000 169 341 1.1E-30 T 10-11-2016 CJM129_RS05925 4e0c83d9f30f14ca08e2f633ad636a31 342 SUPERFAMILY SSF53756 1 341 1.52E-62 T 10-11-2016 CJM129_RS05925 4e0c83d9f30f14ca08e2f633ad636a31 342 PANTHER PTHR30160:SF8 1 289 9.4E-30 T 10-11-2016 CJM129_RS05925 4e0c83d9f30f14ca08e2f633ad636a31 342 Gene3D G3DSA:3.40.50.2000 1 140 5.6E-23 T 10-11-2016 CJM129_RS05925 4e0c83d9f30f14ca08e2f633ad636a31 342 PANTHER PTHR30160 1 289 9.4E-30 T 10-11-2016 CJM129_RS07315 ea961e524c9ae87ae826fd79a131a79f 136 SUPERFAMILY SSF47226 16 125 1.65E-12 T 10-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJM129_RS07315 ea961e524c9ae87ae826fd79a131a79f 136 Gene3D G3DSA:1.20.120.160 16 122 3.5E-4 T 10-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJM129_RS00875 d1371670a0e81be9efc562c13f77ee0e 301 Gene3D G3DSA:3.40.50.300 1 212 5.8E-60 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00875 d1371670a0e81be9efc562c13f77ee0e 301 PANTHER PTHR24220 3 217 1.9E-77 T 10-11-2016 CJM129_RS00875 d1371670a0e81be9efc562c13f77ee0e 301 Pfam PF00005 ABC transporter 17 145 7.0E-26 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS00875 d1371670a0e81be9efc562c13f77ee0e 301 SUPERFAMILY SSF52540 1 210 2.97E-59 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00875 d1371670a0e81be9efc562c13f77ee0e 301 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS00875 d1371670a0e81be9efc562c13f77ee0e 301 SMART SM00382 26 195 1.6E-15 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS01310 4ea245fe4cb9fda052b4ab30f3049b82 146 Pfam PF07977 FabA-like domain 11 138 3.8E-37 T 10-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CJM129_RS01310 4ea245fe4cb9fda052b4ab30f3049b82 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 143 3.8E-56 T 10-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CJM129_RS01310 4ea245fe4cb9fda052b4ab30f3049b82 146 PANTHER PTHR30272 1 146 1.2E-64 T 10-11-2016 CJM129_RS01310 4ea245fe4cb9fda052b4ab30f3049b82 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 145 34.01 T 10-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 CJM129_RS01310 4ea245fe4cb9fda052b4ab30f3049b82 146 SUPERFAMILY SSF54637 1 143 1.07E-47 T 10-11-2016 IPR029069 HotDog domain CJM129_RS01310 4ea245fe4cb9fda052b4ab30f3049b82 146 Gene3D G3DSA:3.10.129.10 2 145 1.2E-53 T 10-11-2016 IPR029069 HotDog domain CJM129_RS08440 ccdcd5d00ed2b47ffb359d9d6353ad6d 117 SUPERFAMILY SSF64263 1 116 1.96E-46 T 10-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08440 ccdcd5d00ed2b47ffb359d9d6353ad6d 117 Gene3D G3DSA:3.90.1030.10 1 116 1.8E-47 T 10-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08440 ccdcd5d00ed2b47ffb359d9d6353ad6d 117 Pfam PF01196 Ribosomal protein L17 20 116 1.9E-33 T 10-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08440 ccdcd5d00ed2b47ffb359d9d6353ad6d 117 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 116 1.6E-47 T 10-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08440 ccdcd5d00ed2b47ffb359d9d6353ad6d 117 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.685 T 10-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08440 ccdcd5d00ed2b47ffb359d9d6353ad6d 117 PANTHER PTHR14413 1 116 3.0E-54 T 10-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS08440 ccdcd5d00ed2b47ffb359d9d6353ad6d 117 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 10-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03080 2fd4f5cdd8817c374c1adb55c1424b8c 165 PANTHER PTHR10173 1 152 1.4E-64 T 10-11-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 CJM129_RS03080 2fd4f5cdd8817c374c1adb55c1424b8c 165 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 151 9.0E-52 T 10-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CJM129_RS03080 2fd4f5cdd8817c374c1adb55c1424b8c 165 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 156 34.37 T 10-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CJM129_RS03080 2fd4f5cdd8817c374c1adb55c1424b8c 165 SUPERFAMILY SSF55068 2 162 2.62E-62 T 10-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CJM129_RS03080 2fd4f5cdd8817c374c1adb55c1424b8c 165 Pfam PF01625 Peptide methionine sulfoxide reductase 4 152 3.1E-57 T 10-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CJM129_RS03080 2fd4f5cdd8817c374c1adb55c1424b8c 165 PANTHER PTHR10173:SF34 1 152 1.4E-64 T 10-11-2016 CJM129_RS03080 2fd4f5cdd8817c374c1adb55c1424b8c 165 Gene3D G3DSA:3.30.1060.10 1 151 9.7E-62 T 10-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 CJM129_RS05355 172952239a217fd99c6549b004ed791d 369 Gene3D G3DSA:3.40.50.2300 17 140 5.0E-33 T 10-11-2016 CJM129_RS05355 172952239a217fd99c6549b004ed791d 369 Gene3D G3DSA:3.40.50.2300 293 346 5.0E-33 T 10-11-2016 CJM129_RS05355 172952239a217fd99c6549b004ed791d 369 Gene3D G3DSA:3.40.50.2300 141 292 8.2E-18 T 10-11-2016 CJM129_RS05355 172952239a217fd99c6549b004ed791d 369 SUPERFAMILY SSF53822 19 361 2.59E-72 T 10-11-2016 IPR028082 Periplasmic binding protein-like I CJM129_RS05355 172952239a217fd99c6549b004ed791d 369 Pfam PF13458 Periplasmic binding protein 19 358 2.9E-47 T 10-11-2016 IPR028081 Leucine-binding protein domain CJM129_RS05355 172952239a217fd99c6549b004ed791d 369 PANTHER PTHR30483:SF6 4 363 1.0E-56 T 10-11-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CJM129_RS05355 172952239a217fd99c6549b004ed791d 369 PANTHER PTHR30483 4 363 1.0E-56 T 10-11-2016 CJM129_RS07985 a7eed1edaf64482ca3c2407f9ec9a8f8 489 Pfam PF00474 Sodium:solute symporter family 38 436 1.6E-102 T 10-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CJM129_RS07985 a7eed1edaf64482ca3c2407f9ec9a8f8 489 PANTHER PTHR11819:SF148 7 472 4.4E-172 T 10-11-2016 CJM129_RS07985 a7eed1edaf64482ca3c2407f9ec9a8f8 489 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 436 7.6E-100 T 10-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CJM129_RS07985 a7eed1edaf64482ca3c2407f9ec9a8f8 489 PANTHER PTHR11819 7 472 4.4E-172 T 10-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CJM129_RS07985 a7eed1edaf64482ca3c2407f9ec9a8f8 489 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 9 485 3.9E-212 T 10-11-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CJM129_RS07985 a7eed1edaf64482ca3c2407f9ec9a8f8 489 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 418 438 - T 10-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CJM129_RS08190 bc115065e269e916e12c69c0b370e58f 321 Pfam PF02626 Allophanate hydrolase subunit 2 25 288 9.2E-77 T 10-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B CJM129_RS08190 bc115065e269e916e12c69c0b370e58f 321 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 313 3.9E-81 T 10-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B CJM129_RS08190 bc115065e269e916e12c69c0b370e58f 321 SMART SM00797 24 305 6.6E-116 T 10-11-2016 IPR003778 Carboxyltransferase domain, subdomain A and B CJM129_RS08190 bc115065e269e916e12c69c0b370e58f 321 PANTHER PTHR18866:SF74 152 321 3.4E-26 T 10-11-2016 CJM129_RS08190 bc115065e269e916e12c69c0b370e58f 321 PANTHER PTHR18866 152 321 3.4E-26 T 10-11-2016 CJM129_RS00575 1f4fcd17f1a75146ae643ebf848a0f85 165 PANTHER PTHR30128 51 162 7.2E-37 T 10-11-2016 CJM129_RS00575 1f4fcd17f1a75146ae643ebf848a0f85 165 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 59 162 3.8E-38 T 10-11-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 CJM129_RS00575 1f4fcd17f1a75146ae643ebf848a0f85 165 Pfam PF00691 OmpA family 61 157 5.8E-21 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS00575 1f4fcd17f1a75146ae643ebf848a0f85 165 SUPERFAMILY SSF103088 57 163 4.58E-32 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS00575 1f4fcd17f1a75146ae643ebf848a0f85 165 PRINTS PR01021 OMPA domain signature 62 84 9.5E-16 T 10-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJM129_RS00575 1f4fcd17f1a75146ae643ebf848a0f85 165 PRINTS PR01021 OMPA domain signature 108 124 9.5E-16 T 10-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJM129_RS00575 1f4fcd17f1a75146ae643ebf848a0f85 165 PRINTS PR01021 OMPA domain signature 93 108 9.5E-16 T 10-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJM129_RS00575 1f4fcd17f1a75146ae643ebf848a0f85 165 PANTHER PTHR30128:SF18 51 162 7.2E-37 T 10-11-2016 CJM129_RS00575 1f4fcd17f1a75146ae643ebf848a0f85 165 Gene3D G3DSA:3.30.1330.60 57 163 3.6E-33 T 10-11-2016 IPR006665 OmpA-like domain CJM129_RS08155 9f67af3b453a516d5b7b5ef50e334fe0 274 Gene3D G3DSA:3.90.550.10 5 270 3.0E-57 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS08155 9f67af3b453a516d5b7b5ef50e334fe0 274 PANTHER PTHR22572 4 273 3.6E-89 T 10-11-2016 CJM129_RS08155 9f67af3b453a516d5b7b5ef50e334fe0 274 PANTHER PTHR22572:SF14 4 273 3.6E-89 T 10-11-2016 CJM129_RS08155 9f67af3b453a516d5b7b5ef50e334fe0 274 Pfam PF00483 Nucleotidyl transferase 9 266 1.8E-26 T 10-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CJM129_RS08155 9f67af3b453a516d5b7b5ef50e334fe0 274 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 264 1.3E-120 T 10-11-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CJM129_RS08155 9f67af3b453a516d5b7b5ef50e334fe0 274 SUPERFAMILY SSF53448 4 269 8.79E-56 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 PANTHER PTHR11458 4 327 1.4E-166 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 152 171 4.9E-55 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 267 282 4.9E-55 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 297 316 4.9E-55 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 190 209 4.9E-55 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 242 258 4.9E-55 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 120 134 4.9E-55 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 SMART SM01004 1 323 2.1E-216 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 321 2.6E-139 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 242 254 - T 10-11-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 Gene3D G3DSA:3.20.20.70 2 325 2.0E-143 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 SUPERFAMILY SSF51569 2 325 3.08E-134 T 10-11-2016 CJM129_RS04835 d6b3779c1e2e1478bae5af5fff87fcc4 327 PIRSF PIRSF001415 1 326 1.8E-141 T 10-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS08295 787fd7051616dba45b5fa69fa2f056a1 495 Pfam PF00361 Proton-conducting membrane transporter 116 402 4.6E-57 T 10-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CJM129_RS08295 787fd7051616dba45b5fa69fa2f056a1 495 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 2 472 5.4E-150 T 10-11-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 CJM129_RS08295 787fd7051616dba45b5fa69fa2f056a1 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 313 332 6.3E-24 T 10-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CJM129_RS08295 787fd7051616dba45b5fa69fa2f056a1 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 365 391 6.3E-24 T 10-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CJM129_RS08295 787fd7051616dba45b5fa69fa2f056a1 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 150 174 6.3E-24 T 10-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CJM129_RS08295 787fd7051616dba45b5fa69fa2f056a1 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 122 141 6.3E-24 T 10-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 CJM129_RS08295 787fd7051616dba45b5fa69fa2f056a1 495 PANTHER PTHR22773:SF40 1 470 1.0E-118 T 10-11-2016 CJM129_RS08295 787fd7051616dba45b5fa69fa2f056a1 495 PANTHER PTHR22773 1 470 1.0E-118 T 10-11-2016 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 PRINTS PR00958 Homoserine kinase signature 124 137 4.1E-29 T 10-11-2016 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 PRINTS PR00958 Homoserine kinase signature 163 180 4.1E-29 T 10-11-2016 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 PRINTS PR00958 Homoserine kinase signature 8 23 4.1E-29 T 10-11-2016 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 PRINTS PR00958 Homoserine kinase signature 90 105 4.1E-29 T 10-11-2016 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 PRINTS PR00958 Homoserine kinase signature 242 257 4.1E-29 T 10-11-2016 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 10-11-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 SUPERFAMILY SSF55060 159 277 1.15E-27 T 10-11-2016 IPR013750 GHMP kinase, C-terminal domain CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 PANTHER PTHR20861:SF1 1 277 9.1E-66 T 10-11-2016 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 Hamap MF_00384 Homoserine kinase [thrB]. 1 291 29.425 T 10-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 TIGRFAM TIGR00191 thrB: homoserine kinase 1 291 3.8E-80 T 10-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 Gene3D G3DSA:3.30.230.10 2 149 4.6E-45 T 10-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 SUPERFAMILY SSF54211 2 149 2.88E-26 T 10-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 PANTHER PTHR20861 1 277 9.1E-66 T 10-11-2016 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 Gene3D G3DSA:3.30.70.890 156 286 8.4E-34 T 10-11-2016 IPR013750 GHMP kinase, C-terminal domain CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 PIRSF PIRSF000676 1 292 7.4E-87 T 10-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 CJM129_RS00680 59e26a716f392a38406c5df98d61c7f0 292 Pfam PF00288 GHMP kinases N terminal domain 77 137 1.1E-10 T 10-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 CJM129_RS08200 93ded5e60a79e3cd92dc2e963d67293b 192 SUPERFAMILY SSF52218 1 192 4.59E-39 T 10-11-2016 IPR029039 Flavoprotein-like domain CJM129_RS08200 93ded5e60a79e3cd92dc2e963d67293b 192 Gene3D G3DSA:3.40.50.360 1 192 7.7E-42 T 10-11-2016 IPR029039 Flavoprotein-like domain CJM129_RS08200 93ded5e60a79e3cd92dc2e963d67293b 192 PANTHER PTHR10204 1 192 1.9E-127 T 10-11-2016 CJM129_RS08200 93ded5e60a79e3cd92dc2e963d67293b 192 PANTHER PTHR10204:SF36 1 192 1.9E-127 T 10-11-2016 CJM129_RS08200 93ded5e60a79e3cd92dc2e963d67293b 192 Pfam PF02525 Flavodoxin-like fold 2 187 2.1E-31 T 10-11-2016 IPR003680 Flavodoxin-like fold CJM129_RS08825 0584b4e047aa529b5df773222cdaf84b 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 87 1.3E-8 T 10-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CJM129_RS05865 fb19313603507e966bfcf9ac5aad1a59 590 SUPERFAMILY SSF51735 272 534 1.7E-54 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05865 fb19313603507e966bfcf9ac5aad1a59 590 Pfam PF02719 Polysaccharide biosynthesis protein 274 550 1.2E-111 T 10-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CJM129_RS05865 fb19313603507e966bfcf9ac5aad1a59 590 PANTHER PTHR10366:SF256 273 535 2.6E-101 T 10-11-2016 CJM129_RS05865 fb19313603507e966bfcf9ac5aad1a59 590 Gene3D G3DSA:3.40.50.720 142 240 1.0E-6 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05865 fb19313603507e966bfcf9ac5aad1a59 590 Gene3D G3DSA:3.40.50.720 272 450 1.8E-43 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05865 fb19313603507e966bfcf9ac5aad1a59 590 PANTHER PTHR10366 273 535 2.6E-101 T 10-11-2016 CJM129_RS05865 fb19313603507e966bfcf9ac5aad1a59 590 SUPERFAMILY SSF53335 111 333 2.66E-5 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS05865 fb19313603507e966bfcf9ac5aad1a59 590 Gene3D G3DSA:3.90.25.10 451 535 5.7E-7 T 10-11-2016 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 SUPERFAMILY SSF55681 1 281 6.13E-126 T 10-11-2016 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 285 57.931 T 10-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 282 2.0E-144 T 10-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 Gene3D G3DSA:3.30.930.10 1 207 3.1E-102 T 10-11-2016 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.9E-66 T 10-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.9E-66 T 10-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.9E-66 T 10-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.9E-66 T 10-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.9E-66 T 10-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 245 261 1.9E-66 T 10-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 PANTHER PTHR30075 1 279 4.6E-206 T 10-11-2016 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 Gene3D G3DSA:1.20.58.180 209 284 7.8E-31 T 10-11-2016 CJM129_RS03400 b76e109c4ad3c235806e3cd18ed3c568 287 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 284 3.9E-153 T 10-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJM129_RS09200 1313c3958144052d48e778b5548aa96f 293 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 281 2.0E-142 T 10-11-2016 CJM129_RS09200 1313c3958144052d48e778b5548aa96f 293 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 293 1.6E-149 T 10-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 CJM129_RS09200 1313c3958144052d48e778b5548aa96f 293 Gene3D G3DSA:3.40.50.880 33 291 7.0E-92 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS09200 1313c3958144052d48e778b5548aa96f 293 PIRSF PIRSF000450 1 293 4.3E-124 T 10-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 CJM129_RS09200 1313c3958144052d48e778b5548aa96f 293 SUPERFAMILY SSF52317 16 288 2.04E-74 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS09200 1313c3958144052d48e778b5548aa96f 293 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 293 46.198 T 10-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 CJM129_RS09200 1313c3958144052d48e778b5548aa96f 293 PANTHER PTHR20919 2 293 7.2E-103 T 10-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 CJM129_RS09200 1313c3958144052d48e778b5548aa96f 293 PANTHER PTHR20919:SF0 2 293 7.2E-103 T 10-11-2016 CJM129_RS09200 1313c3958144052d48e778b5548aa96f 293 Pfam PF04204 Homoserine O-succinyltransferase 2 291 6.5E-109 T 10-11-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 CJM129_RS03935 180133d86f07445ac7fe22b625808728 308 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 16 304 21.293 T 10-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CJM129_RS03935 180133d86f07445ac7fe22b625808728 308 PANTHER PTHR30160:SF13 25 148 9.1E-14 T 10-11-2016 CJM129_RS03935 180133d86f07445ac7fe22b625808728 308 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 216 303 8.9E-8 T 10-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CJM129_RS03935 180133d86f07445ac7fe22b625808728 308 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 26 203 7.4E-28 T 10-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 CJM129_RS03935 180133d86f07445ac7fe22b625808728 308 PANTHER PTHR30160 25 148 9.1E-14 T 10-11-2016 CJM129_RS04370 2cb61b741e2d7b5443823d00d0ee3157 325 PANTHER PTHR36699 1 316 2.6E-13 T 10-11-2016 CJM129_RS04370 2cb61b741e2d7b5443823d00d0ee3157 325 SUPERFAMILY SSF54427 214 324 9.64E-5 T 10-11-2016 IPR032710 NTF2-like domain CJM129_RS04370 2cb61b741e2d7b5443823d00d0ee3157 325 SUPERFAMILY SSF141523 71 191 4.32E-11 T 10-11-2016 CJM129_RS04370 2cb61b741e2d7b5443823d00d0ee3157 325 Pfam PF03734 L,D-transpeptidase catalytic domain 67 192 4.0E-15 T 10-11-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 CJM129_RS04370 2cb61b741e2d7b5443823d00d0ee3157 325 Gene3D G3DSA:2.40.440.10 78 196 6.0E-8 T 10-11-2016 CJM129_RS06990 8eaae6348ca60ef581094319ae788fd4 261 SUPERFAMILY SSF110710 1 254 7.85E-64 T 10-11-2016 CJM129_RS06990 8eaae6348ca60ef581094319ae788fd4 261 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 34 249 1.6E-33 T 10-11-2016 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 Pfam PF12804 MobA-like NTP transferase domain 6 138 4.6E-14 T 10-11-2016 IPR025877 MobA-like NTP transferase CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 Gene3D G3DSA:2.160.10.10 249 409 5.8E-30 T 10-11-2016 CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 427 2.7E-159 T 10-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 368 400 5.8E-7 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 PANTHER PTHR22572 4 422 1.9E-137 T 10-11-2016 CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 SUPERFAMILY SSF53448 1 246 1.0E-47 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 Gene3D G3DSA:3.90.550.10 1 244 6.4E-53 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 425 32.334 T 10-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 PANTHER PTHR22572:SF115 4 422 1.9E-137 T 10-11-2016 CJM129_RS03965 666a0c2aa8e7cb5609e0e1f6230fb709 429 SUPERFAMILY SSF51161 252 410 6.15E-30 T 10-11-2016 IPR011004 Trimeric LpxA-like CJM129_RS01880 5715f60bb3d77fa9ecf0958a67b083a6 448 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 418 7.1E-27 T 10-11-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 CJM129_RS01880 5715f60bb3d77fa9ecf0958a67b083a6 448 PANTHER PTHR13847:SF191 1 443 2.5E-18 T 10-11-2016 CJM129_RS01880 5715f60bb3d77fa9ecf0958a67b083a6 448 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 2 448 32.028 T 10-11-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 CJM129_RS01880 5715f60bb3d77fa9ecf0958a67b083a6 448 Gene3D G3DSA:3.50.50.60 4 53 5.3E-22 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01880 5715f60bb3d77fa9ecf0958a67b083a6 448 Gene3D G3DSA:3.50.50.60 109 295 5.3E-22 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01880 5715f60bb3d77fa9ecf0958a67b083a6 448 SUPERFAMILY SSF51905 4 264 3.35E-22 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01880 5715f60bb3d77fa9ecf0958a67b083a6 448 PANTHER PTHR13847 1 443 2.5E-18 T 10-11-2016 CJM129_RS05125 c5067d3f1a22b98fdfeec3a03a5022d1 246 Pfam PF12796 Ankyrin repeats (3 copies) 75 168 3.3E-8 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS05125 c5067d3f1a22b98fdfeec3a03a5022d1 246 PANTHER PTHR24188 72 189 4.7E-12 T 10-11-2016 CJM129_RS05125 c5067d3f1a22b98fdfeec3a03a5022d1 246 SUPERFAMILY SSF48403 15 186 1.71E-14 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS05125 c5067d3f1a22b98fdfeec3a03a5022d1 246 SMART SM00248 63 95 1200.0 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS05125 c5067d3f1a22b98fdfeec3a03a5022d1 246 SMART SM00248 139 169 23.0 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS05125 c5067d3f1a22b98fdfeec3a03a5022d1 246 SMART SM00248 100 129 1.6 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS05125 c5067d3f1a22b98fdfeec3a03a5022d1 246 Gene3D G3DSA:1.25.40.20 74 188 4.1E-14 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS06335 2cb6bd988dbba3d3ac203d89f58890b2 226 Gene3D G3DSA:3.60.140.10 37 225 6.1E-46 T 10-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CJM129_RS06335 2cb6bd988dbba3d3ac203d89f58890b2 226 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 38 222 3.7E-39 T 10-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CJM129_RS06335 2cb6bd988dbba3d3ac203d89f58890b2 226 PANTHER PTHR30616 47 226 5.5E-32 T 10-11-2016 CJM129_RS06335 2cb6bd988dbba3d3ac203d89f58890b2 226 SUPERFAMILY SSF64438 23 224 2.75E-47 T 10-11-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PRINTS PR01010 Flagellar P-ring protein signature 116 134 7.8E-75 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PRINTS PR01010 Flagellar P-ring protein signature 241 253 7.8E-75 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PRINTS PR01010 Flagellar P-ring protein signature 33 48 7.8E-75 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PRINTS PR01010 Flagellar P-ring protein signature 77 96 7.8E-75 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PRINTS PR01010 Flagellar P-ring protein signature 179 197 7.8E-75 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PRINTS PR01010 Flagellar P-ring protein signature 99 116 7.8E-75 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PRINTS PR01010 Flagellar P-ring protein signature 153 171 7.8E-75 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PRINTS PR01010 Flagellar P-ring protein signature 52 67 7.8E-75 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PRINTS PR01010 Flagellar P-ring protein signature 18 33 7.8E-75 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 348 36.114 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PANTHER PTHR30381 3 348 4.1E-106 T 10-11-2016 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 PANTHER PTHR30381:SF1 3 348 4.1E-106 T 10-11-2016 CJM129_RS07790 184735473cbb0fe9ba9177a97c4ef6f6 348 Pfam PF02119 Flagellar P-ring protein 18 347 2.4E-114 T 10-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJM129_RS03795 cb51bc6394eaac7c8fda8beb0894230c 173 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 23 151 3.4E-42 T 10-11-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CJM129_RS03795 cb51bc6394eaac7c8fda8beb0894230c 173 PIRSF PIRSF006105 1 166 1.5E-48 T 10-11-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CJM129_RS03795 cb51bc6394eaac7c8fda8beb0894230c 173 SUPERFAMILY SSF48695 30 157 6.83E-36 T 10-11-2016 IPR011031 Multihaem cytochrome CJM129_RS03795 cb51bc6394eaac7c8fda8beb0894230c 173 PANTHER PTHR38604 1 157 1.9E-27 T 10-11-2016 CJM129_RS03795 cb51bc6394eaac7c8fda8beb0894230c 173 PANTHER PTHR38604:SF1 1 157 1.9E-27 T 10-11-2016 CJM129_RS03795 cb51bc6394eaac7c8fda8beb0894230c 173 Gene3D G3DSA:4.10.1020.10 67 137 8.9E-27 T 10-11-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 Gene3D G3DSA:3.90.1260.10 164 361 3.3E-95 T 10-11-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 PANTHER PTHR11587 4 405 5.3E-223 T 10-11-2016 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 Pfam PF00764 Arginosuccinate synthase 9 396 1.8E-151 T 10-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 404 50.751 T 10-11-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 PANTHER PTHR11587:SF2 4 405 5.3E-223 T 10-11-2016 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 10-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 SUPERFAMILY SSF52402 6 171 1.01E-46 T 10-11-2016 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 SUPERFAMILY SSF69864 177 404 2.22E-91 T 10-11-2016 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 Gene3D G3DSA:1.20.5.470 375 395 1.6E-4 T 10-11-2016 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 Gene3D G3DSA:3.40.50.620 6 163 4.1E-66 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 10-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS03220 0fcd5cbdac6904abaf86aa402b49116e 406 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 396 4.1E-142 T 10-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 CJM129_RS04250 81fbca06727858ae0c9082a6987b0820 136 Gene3D G3DSA:1.10.10.10 4 133 4.0E-27 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS04250 81fbca06727858ae0c9082a6987b0820 136 PANTHER PTHR33221 3 133 9.6E-30 T 10-11-2016 CJM129_RS04250 81fbca06727858ae0c9082a6987b0820 136 PANTHER PTHR33221:SF2 3 133 9.6E-30 T 10-11-2016 CJM129_RS04250 81fbca06727858ae0c9082a6987b0820 136 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 9.5E-39 T 10-11-2016 IPR000944 Transcription regulator Rrf2-type CJM129_RS04250 81fbca06727858ae0c9082a6987b0820 136 SUPERFAMILY SSF46785 4 133 9.1E-28 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS04250 81fbca06727858ae0c9082a6987b0820 136 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 47 65 - T 10-11-2016 IPR030489 Transcription regulator Rrf2-type, conserved site CJM129_RS04250 81fbca06727858ae0c9082a6987b0820 136 Pfam PF02082 Transcriptional regulator 4 79 1.2E-18 T 10-11-2016 IPR000944 Transcription regulator Rrf2-type CJM129_RS00420 56348dbe4ac9b413ff2acda4914843fe 520 PANTHER PTHR30365:SF0 1 317 1.8E-208 T 10-11-2016 CJM129_RS00420 56348dbe4ac9b413ff2acda4914843fe 520 PANTHER PTHR30365:SF0 380 504 1.8E-208 T 10-11-2016 CJM129_RS00420 56348dbe4ac9b413ff2acda4914843fe 520 PANTHER PTHR30365 380 504 1.8E-208 T 10-11-2016 CJM129_RS00420 56348dbe4ac9b413ff2acda4914843fe 520 PANTHER PTHR30365 1 317 1.8E-208 T 10-11-2016 CJM129_RS00420 56348dbe4ac9b413ff2acda4914843fe 520 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 504 1.5E-171 T 10-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 CJM129_RS00420 56348dbe4ac9b413ff2acda4914843fe 520 PIRSF PIRSF006446 2 520 1.2E-134 T 10-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 CJM129_RS08235 809bd8de69bb7997ae6c1c099439127c 356 Pfam PF02661 Fic/DOC family 111 208 7.0E-20 T 10-11-2016 IPR003812 Fido domain CJM129_RS08235 809bd8de69bb7997ae6c1c099439127c 356 SUPERFAMILY SSF46785 292 343 3.54E-5 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS08235 809bd8de69bb7997ae6c1c099439127c 356 SUPERFAMILY SSF140931 85 274 6.67E-36 T 10-11-2016 IPR003812 Fido domain CJM129_RS08235 809bd8de69bb7997ae6c1c099439127c 356 Gene3D G3DSA:1.10.3290.10 22 274 2.6E-53 T 10-11-2016 IPR003812 Fido domain CJM129_RS08235 809bd8de69bb7997ae6c1c099439127c 356 PIRSF PIRSF038925 1 354 5.0E-112 T 10-11-2016 IPR026287 Adenosine monophosphate-protein transferase CJM129_RS08235 809bd8de69bb7997ae6c1c099439127c 356 PANTHER PTHR13504 9 353 3.5E-72 T 10-11-2016 CJM129_RS08235 809bd8de69bb7997ae6c1c099439127c 356 Gene3D G3DSA:1.10.10.10 304 348 0.001 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS08235 809bd8de69bb7997ae6c1c099439127c 356 Pfam PF13784 Fic/DOC family N-terminal 21 100 7.5E-26 T 10-11-2016 IPR025758 Fic/DOC N-terminal CJM129_RS08235 809bd8de69bb7997ae6c1c099439127c 356 PANTHER PTHR13504:SF35 9 353 3.5E-72 T 10-11-2016 CJM129_RS08135 70873ad31dc5a0eaae586dee1e27128c 243 PANTHER PTHR40572 31 239 3.4E-35 T 10-11-2016 CJM129_RS08135 70873ad31dc5a0eaae586dee1e27128c 243 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 104 233 1.2E-15 T 10-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CJM129_RS08135 70873ad31dc5a0eaae586dee1e27128c 243 SMART SM00047 85 214 4.9E-4 T 10-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CJM129_RS00635 3a288785821011234de6721a56446b1c 120 PANTHER PTHR33823 1 118 1.5E-22 T 10-11-2016 CJM129_RS00635 3a288785821011234de6721a56446b1c 120 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 79 114 2.2E-11 T 10-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CJM129_RS00635 3a288785821011234de6721a56446b1c 120 SUPERFAMILY SSF109635 1 80 2.35E-13 T 10-11-2016 CJM129_RS00635 3a288785821011234de6721a56446b1c 120 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 84 108 - T 10-11-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CJM129_RS00635 3a288785821011234de6721a56446b1c 120 SUPERFAMILY SSF57716 81 118 2.46E-10 T 10-11-2016 CJM129_RS03710 a44448c006c0f9e3c70b13c530750aaa 192 Pfam PF02223 Thymidylate kinase 5 187 4.6E-33 T 10-11-2016 CJM129_RS03710 a44448c006c0f9e3c70b13c530750aaa 192 PANTHER PTHR10344:SF0 1 192 4.9E-25 T 10-11-2016 CJM129_RS03710 a44448c006c0f9e3c70b13c530750aaa 192 PANTHER PTHR10344 1 192 4.9E-25 T 10-11-2016 CJM129_RS03710 a44448c006c0f9e3c70b13c530750aaa 192 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 187 1.3E-39 T 10-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CJM129_RS03710 a44448c006c0f9e3c70b13c530750aaa 192 Hamap MF_00165 Thymidylate kinase [tmk]. 1 191 19.73 T 10-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 CJM129_RS03710 a44448c006c0f9e3c70b13c530750aaa 192 SUPERFAMILY SSF52540 2 190 7.33E-37 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03710 a44448c006c0f9e3c70b13c530750aaa 192 Gene3D G3DSA:3.40.50.300 2 191 5.6E-41 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03050 f49cef164b9d243709e13ebd9cb87ecc 644 ProSitePatterns PS01175 Ribonuclease II family signature. 496 520 - T 10-11-2016 IPR022966 Ribonuclease II/R, conserved site CJM129_RS03050 f49cef164b9d243709e13ebd9cb87ecc 644 PANTHER PTHR23355:SF9 164 585 7.6E-100 T 10-11-2016 CJM129_RS03050 f49cef164b9d243709e13ebd9cb87ecc 644 SUPERFAMILY SSF50249 177 570 2.23E-105 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS03050 f49cef164b9d243709e13ebd9cb87ecc 644 SUPERFAMILY SSF50249 39 111 1.03E-6 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS03050 f49cef164b9d243709e13ebd9cb87ecc 644 PANTHER PTHR23355 164 585 7.6E-100 T 10-11-2016 CJM129_RS03050 f49cef164b9d243709e13ebd9cb87ecc 644 Pfam PF00773 RNB domain 215 525 3.6E-86 T 10-11-2016 CJM129_RS03050 f49cef164b9d243709e13ebd9cb87ecc 644 SMART SM00955 215 529 1.6E-122 T 10-11-2016 CJM129_RS08345 86a5f54086168423ed312d0275c4a253 263 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 139 160 - T 10-11-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 CJM129_RS08345 86a5f54086168423ed312d0275c4a253 263 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 112 174 4.0E-32 T 10-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 CJM129_RS08345 86a5f54086168423ed312d0275c4a253 263 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 60 178 1.3E-41 T 10-11-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 CJM129_RS08345 86a5f54086168423ed312d0275c4a253 263 PANTHER PTHR10884:SF6 61 178 5.7E-38 T 10-11-2016 CJM129_RS08345 86a5f54086168423ed312d0275c4a253 263 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 62 179 7.6E-35 T 10-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 CJM129_RS08345 86a5f54086168423ed312d0275c4a253 263 SUPERFAMILY SSF143243 49 205 1.01E-44 T 10-11-2016 CJM129_RS08345 86a5f54086168423ed312d0275c4a253 263 PANTHER PTHR10884 61 178 5.7E-38 T 10-11-2016 CJM129_RS03925 5d1c4d1b521da78eccd43b4e247eb7d2 198 PANTHER PTHR11935 13 188 4.5E-45 T 10-11-2016 CJM129_RS03925 5d1c4d1b521da78eccd43b4e247eb7d2 198 SUPERFAMILY SSF56281 8 195 2.36E-45 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS03925 5d1c4d1b521da78eccd43b4e247eb7d2 198 SMART SM00849 12 178 3.3E-34 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS03925 5d1c4d1b521da78eccd43b4e247eb7d2 198 Gene3D G3DSA:3.60.15.10 9 190 1.7E-43 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS03925 5d1c4d1b521da78eccd43b4e247eb7d2 198 Pfam PF00753 Metallo-beta-lactamase superfamily 12 178 1.1E-26 T 10-11-2016 IPR001279 Metallo-beta-lactamase CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 Pfam PF01795 MraW methylase family 3 302 9.7E-98 T 10-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 Gene3D G3DSA:1.10.150.170 110 210 8.7E-28 T 10-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 4 302 4.0E-93 T 10-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 305 31.017 T 10-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 Gene3D G3DSA:3.40.50.150 5 107 1.3E-43 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 Gene3D G3DSA:3.40.50.150 211 302 1.3E-43 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 PANTHER PTHR11265:SF0 1 307 6.5E-99 T 10-11-2016 CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 PIRSF PIRSF004486 1 305 4.2E-97 T 10-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 SUPERFAMILY SSF81799 111 208 1.44E-25 T 10-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 SUPERFAMILY SSF53335 208 302 3.11E-33 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 SUPERFAMILY SSF53335 4 110 3.11E-33 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03345 02ef02f4dde51bbb849e036969e87b8d 310 PANTHER PTHR11265 1 307 6.5E-99 T 10-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS04590 39fbd2efde3f945f7e4147cbc6737a84 448 Pfam PF12913 SH3 domain (SH3b1 type) 149 199 4.3E-16 T 10-11-2016 CJM129_RS04590 39fbd2efde3f945f7e4147cbc6737a84 448 Pfam PF12912 NLPC_P60 stabilising domain, N term 7 124 8.0E-8 T 10-11-2016 IPR025606 NLPC/P60, N-terminal domain CJM129_RS04590 39fbd2efde3f945f7e4147cbc6737a84 448 SUPERFAMILY SSF54001 274 385 3.83E-11 T 10-11-2016 CJM129_RS04590 39fbd2efde3f945f7e4147cbc6737a84 448 Pfam PF00877 NlpC/P60 family 295 350 1.3E-7 T 10-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CJM129_RS04590 39fbd2efde3f945f7e4147cbc6737a84 448 Gene3D G3DSA:3.90.1720.10 276 385 5.0E-13 T 10-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CJM129_RS04590 39fbd2efde3f945f7e4147cbc6737a84 448 Pfam PF12914 SH3 domain of SH3b2 type 212 253 1.8E-9 T 10-11-2016 IPR026864 SH3b2-type SH3 domain CJM129_RS04590 39fbd2efde3f945f7e4147cbc6737a84 448 PIRSF PIRSF019015 1 433 1.7E-133 T 10-11-2016 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 Gene3D G3DSA:1.10.287.950 459 655 2.5E-43 T 10-11-2016 CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 Gene3D G3DSA:3.30.450.20 99 191 9.5E-21 T 10-11-2016 CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 SMART SM00283 467 658 3.3E-27 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 517 590 8.0E-29 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 SUPERFAMILY SSF103190 58 197 4.12E-15 T 10-11-2016 IPR029151 Periplasmic sensor domain-like CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 SUPERFAMILY SSF58104 445 657 5.62E-50 T 10-11-2016 CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 SUPERFAMILY SSF58104 340 370 5.62E-50 T 10-11-2016 CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 Pfam PF02743 Cache domain 47 258 2.1E-22 T 10-11-2016 IPR033479 Double Cache domain 1 CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 PANTHER PTHR32089 136 350 4.1E-58 T 10-11-2016 CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 PANTHER PTHR32089 462 652 4.1E-58 T 10-11-2016 CJM129_RS01270 32633c3827523a4da347432a806cb0fc 659 PANTHER PTHR32089 404 437 4.1E-58 T 10-11-2016 CJM129_RS05425 beda3d2f63d42208b4e21e56177a9260 246 SUPERFAMILY SSF111369 26 241 2.22E-15 T 10-11-2016 CJM129_RS05425 beda3d2f63d42208b4e21e56177a9260 246 PANTHER PTHR30469 24 243 3.2E-22 T 10-11-2016 CJM129_RS05425 beda3d2f63d42208b4e21e56177a9260 246 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 19 243 6.4E-31 T 10-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 CJM129_RS05425 beda3d2f63d42208b4e21e56177a9260 246 Gene3D G3DSA:2.40.50.100 136 159 8.8E-8 T 10-11-2016 CJM129_RS05425 beda3d2f63d42208b4e21e56177a9260 246 Gene3D G3DSA:2.40.50.100 39 63 8.8E-8 T 10-11-2016 CJM129_RS05425 beda3d2f63d42208b4e21e56177a9260 246 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 23 231 3.5E-12 T 10-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJM129_RS06205 04a8746c6bbdc1ef4eb1b2954f3792c0 164 Gene3D G3DSA:3.30.450.20 11 107 6.9E-17 T 10-11-2016 CJM129_RS06205 04a8746c6bbdc1ef4eb1b2954f3792c0 164 Pfam PF08447 PAS fold 22 107 3.5E-12 T 10-11-2016 IPR013655 PAS fold-3 GO:0005515 CJM129_RS06205 04a8746c6bbdc1ef4eb1b2954f3792c0 164 SUPERFAMILY SSF55785 14 108 2.62E-22 T 10-11-2016 IPR000014 PAS domain CJM129_RS06205 04a8746c6bbdc1ef4eb1b2954f3792c0 164 PANTHER PTHR32089:SF52 1 131 1.7E-17 T 10-11-2016 CJM129_RS06205 04a8746c6bbdc1ef4eb1b2954f3792c0 164 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 104 1.7E-11 T 10-11-2016 IPR000014 PAS domain CJM129_RS06205 04a8746c6bbdc1ef4eb1b2954f3792c0 164 PANTHER PTHR32089 1 131 1.7E-17 T 10-11-2016 CJM129_RS01470 f7981b6a768825e4deca035ddaa84f72 112 PANTHER PTHR30561 7 111 8.0E-24 T 10-11-2016 CJM129_RS01470 f7981b6a768825e4deca035ddaa84f72 112 PANTHER PTHR30561:SF7 7 111 8.0E-24 T 10-11-2016 CJM129_RS01470 f7981b6a768825e4deca035ddaa84f72 112 SUPERFAMILY SSF103481 14 109 1.44E-11 T 10-11-2016 CJM129_RS01470 f7981b6a768825e4deca035ddaa84f72 112 Pfam PF00893 Small Multidrug Resistance protein 10 97 1.4E-15 T 10-11-2016 IPR000390 Small multidrug resistance protein family GO:0016021 CJM129_RS02650 64645fec76d78843be80dac7411a0175 230 PANTHER PTHR41293:SF1 1 229 9.5E-76 T 10-11-2016 CJM129_RS02650 64645fec76d78843be80dac7411a0175 230 PANTHER PTHR41293 1 229 9.5E-76 T 10-11-2016 CJM129_RS02650 64645fec76d78843be80dac7411a0175 230 Pfam PF06149 Protein of unknown function (DUF969) 4 219 6.1E-86 T 10-11-2016 IPR010374 Protein of unknown function DUF969 CJM129_RS07070 e86cb5c30b88625afcc99fabfd67efb6 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 204 4.6E-82 T 10-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CJM129_RS07070 e86cb5c30b88625afcc99fabfd67efb6 205 PANTHER PTHR21235 6 204 8.2E-80 T 10-11-2016 CJM129_RS07070 e86cb5c30b88625afcc99fabfd67efb6 205 Pfam PF00117 Glutamine amidotransferase class-I 8 202 2.7E-19 T 10-11-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CJM129_RS07070 e86cb5c30b88625afcc99fabfd67efb6 205 PIRSF PIRSF000495 4 205 3.7E-76 T 10-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CJM129_RS07070 e86cb5c30b88625afcc99fabfd67efb6 205 SUPERFAMILY SSF52317 6 196 3.44E-53 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS07070 e86cb5c30b88625afcc99fabfd67efb6 205 PANTHER PTHR21235:SF1 6 204 8.2E-80 T 10-11-2016 CJM129_RS07070 e86cb5c30b88625afcc99fabfd67efb6 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 205 37.714 T 10-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 CJM129_RS07070 e86cb5c30b88625afcc99fabfd67efb6 205 Gene3D G3DSA:3.40.50.880 4 205 2.1E-73 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS08780 afd9b53b3913075ce1d00d0b9046bf47 467 Pfam PF04945 YHS domain 407 452 2.5E-11 T 10-11-2016 IPR007029 YHS domain CJM129_RS08780 afd9b53b3913075ce1d00d0b9046bf47 467 Pfam PF10080 Predicted membrane protein (DUF2318) 297 399 7.1E-30 T 10-11-2016 IPR018758 Domain of unknown function DUF2318, membrane CJM129_RS00860 fccc83eecdaf26e605c134a3fa8594ea 72 Gene3D G3DSA:3.40.50.150 6 61 8.5E-7 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00860 fccc83eecdaf26e605c134a3fa8594ea 72 SUPERFAMILY SSF53335 2 60 5.78E-8 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS05830 857940d0b76b134b55d630d23c635610 265 PANTHER PTHR21496:SF10 53 261 5.7E-42 T 10-11-2016 CJM129_RS05830 857940d0b76b134b55d630d23c635610 265 PIRSF PIRSF012318 1 265 1.6E-91 T 10-11-2016 IPR011197 Uncharacterised conserved protein UCP012318 CJM129_RS05830 857940d0b76b134b55d630d23c635610 265 PANTHER PTHR21496 53 261 5.7E-42 T 10-11-2016 CJM129_RS05830 857940d0b76b134b55d630d23c635610 265 Pfam PF04305 Protein of unknown function (DUF455) 16 257 2.9E-68 T 10-11-2016 IPR007402 Protein of unknown function DUF455 CJM129_RS05830 857940d0b76b134b55d630d23c635610 265 SUPERFAMILY SSF47240 73 219 3.19E-6 T 10-11-2016 IPR009078 Ferritin-like superfamily CJM129_RS00610 8f37793deec72c893f68c99916e3e51d 204 Pfam PF13114 RecO N terminal 1 70 1.8E-32 T 10-11-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal CJM129_RS02100 c8f60829f9ec1b80cc2da1506d1bd144 353 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 31 353 2.1E-119 T 10-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS02100 c8f60829f9ec1b80cc2da1506d1bd144 353 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 64 74 4.9E-4 T 10-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS02100 c8f60829f9ec1b80cc2da1506d1bd144 353 Pfam PF00953 Glycosyl transferase family 4 93 277 2.5E-39 T 10-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS02100 c8f60829f9ec1b80cc2da1506d1bd144 353 ProSitePatterns PS01347 MraY family signature 1. 62 74 - T 10-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS02100 c8f60829f9ec1b80cc2da1506d1bd144 353 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 19 351 22.926 T 10-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS02100 c8f60829f9ec1b80cc2da1506d1bd144 353 PANTHER PTHR22926 1 353 2.1E-125 T 10-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS02100 c8f60829f9ec1b80cc2da1506d1bd144 353 PANTHER PTHR22926:SF5 1 353 2.1E-125 T 10-11-2016 CJM129_RS02100 c8f60829f9ec1b80cc2da1506d1bd144 353 ProSitePatterns PS01348 MraY family signature 2. 182 193 - T 10-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS05600 6c1fb361e8985938bea70310937b4103 178 PIRSF PIRSF000847 1 178 9.1E-46 T 10-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CJM129_RS05600 6c1fb361e8985938bea70310937b4103 178 PANTHER PTHR14269 1 170 2.2E-33 T 10-11-2016 CJM129_RS05600 6c1fb361e8985938bea70310937b4103 178 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 174 1.5E-45 T 10-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CJM129_RS05600 6c1fb361e8985938bea70310937b4103 178 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 52 74 - T 10-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJM129_RS05600 6c1fb361e8985938bea70310937b4103 178 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 74 1.6E-15 T 10-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJM129_RS04595 cc4e13a9eda2fe6215799756282d4e71 290 PANTHER PTHR23088:SF11 1 287 1.5E-115 T 10-11-2016 CJM129_RS04595 cc4e13a9eda2fe6215799756282d4e71 290 SUPERFAMILY SSF56317 1 286 7.06E-80 T 10-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJM129_RS04595 cc4e13a9eda2fe6215799756282d4e71 290 PANTHER PTHR23088 1 287 1.5E-115 T 10-11-2016 CJM129_RS04595 cc4e13a9eda2fe6215799756282d4e71 290 Pfam PF00795 Carbon-nitrogen hydrolase 2 267 2.0E-52 T 10-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJM129_RS04595 cc4e13a9eda2fe6215799756282d4e71 290 Gene3D G3DSA:3.60.110.10 1 286 3.5E-95 T 10-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 353 3.6E-74 T 10-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 Gene3D G3DSA:3.10.150.10 244 353 3.6E-16 T 10-11-2016 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 241 353 1.0E-11 T 10-11-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 SUPERFAMILY SSF55979 125 239 2.01E-21 T 10-11-2016 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 4.2E-17 T 10-11-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 SUPERFAMILY SSF55979 1 119 4.82E-20 T 10-11-2016 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 238 1.5E-17 T 10-11-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 SMART SM00480 17 351 1.1E-58 T 10-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 PIRSF PIRSF000804 1 355 1.8E-73 T 10-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 PANTHER PTHR30478 2 355 4.7E-63 T 10-11-2016 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 Gene3D G3DSA:3.10.150.10 122 243 3.7E-26 T 10-11-2016 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 Gene3D G3DSA:3.10.150.10 1 119 8.5E-17 T 10-11-2016 CJM129_RS00010 dc3818d4db191600320d530887ae4075 355 SUPERFAMILY SSF55979 240 353 6.49E-19 T 10-11-2016 CJM129_RS06365 0e94767cadbd76d57af7997613da27d2 221 SUPERFAMILY SSF52172 4 178 1.08E-34 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS06365 0e94767cadbd76d57af7997613da27d2 221 Gene3D G3DSA:3.40.50.2300 3 126 4.4E-35 T 10-11-2016 CJM129_RS06365 0e94767cadbd76d57af7997613da27d2 221 SMART SM00448 3 114 1.9E-31 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS06365 0e94767cadbd76d57af7997613da27d2 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 219 3.5E-17 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS06365 0e94767cadbd76d57af7997613da27d2 221 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-24 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS06365 0e94767cadbd76d57af7997613da27d2 221 PANTHER PTHR26402 3 218 1.9E-59 T 10-11-2016 CJM129_RS06365 0e94767cadbd76d57af7997613da27d2 221 SMART SM00862 149 220 5.2E-16 T 10-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJM129_RS06365 0e94767cadbd76d57af7997613da27d2 221 Gene3D G3DSA:1.10.10.10 136 219 4.3E-17 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS07015 8b2ebeef3646063690a982469e6fbadc 353 SUPERFAMILY SSF53901 166 338 1.1E-23 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS07015 8b2ebeef3646063690a982469e6fbadc 353 Gene3D G3DSA:3.40.47.10 8 169 1.1E-35 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS07015 8b2ebeef3646063690a982469e6fbadc 353 PANTHER PTHR34069 4 345 2.8E-58 T 10-11-2016 CJM129_RS07015 8b2ebeef3646063690a982469e6fbadc 353 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 116 191 7.3E-18 T 10-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CJM129_RS07015 8b2ebeef3646063690a982469e6fbadc 353 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 252 337 1.7E-17 T 10-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 CJM129_RS07015 8b2ebeef3646063690a982469e6fbadc 353 Gene3D G3DSA:3.40.47.10 170 185 5.5E-34 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS07015 8b2ebeef3646063690a982469e6fbadc 353 Gene3D G3DSA:3.40.47.10 221 340 5.5E-34 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS07015 8b2ebeef3646063690a982469e6fbadc 353 SUPERFAMILY SSF53901 5 179 1.17E-36 T 10-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJM129_RS07015 8b2ebeef3646063690a982469e6fbadc 353 PANTHER PTHR34069:SF2 4 345 2.8E-58 T 10-11-2016 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 PANTHER PTHR10795:SF419 179 325 4.3E-25 T 10-11-2016 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 503 533 1.3E-8 T 10-11-2016 IPR013425 Autotransporter-associated beta strand repeat CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 SUPERFAMILY SSF51126 469 603 1.51E-7 T 10-11-2016 IPR011050 Pectin lyase fold/virulence factor CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 SUPERFAMILY SSF51126 230 315 1.51E-7 T 10-11-2016 IPR011050 Pectin lyase fold/virulence factor CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 SUPERFAMILY SSF51126 367 399 1.51E-7 T 10-11-2016 IPR011050 Pectin lyase fold/virulence factor CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 SUPERFAMILY SSF103515 795 1018 1.96E-14 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 Pfam PF03797 Autotransporter beta-domain 799 971 8.7E-9 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 SUPERFAMILY SSF52743 21 139 2.09E-47 T 10-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 SUPERFAMILY SSF52743 186 328 2.09E-47 T 10-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 PIRSF PIRSF037905 1 1041 0.0 T 10-11-2016 IPR017318 Peptidase S8A, subtilisin-related, campylobacter CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 Pfam PF00082 Subtilase family 34 333 2.5E-33 T 10-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 290 300 - T 10-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 80 90 - T 10-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 Gene3D G3DSA:2.40.128.130 803 1033 1.1E-16 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 Gene3D G3DSA:3.40.50.200 182 329 2.1E-52 T 10-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 Gene3D G3DSA:3.40.50.200 418 436 2.1E-52 T 10-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 Gene3D G3DSA:3.40.50.200 361 362 2.1E-52 T 10-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 Gene3D G3DSA:3.40.50.200 22 144 2.1E-52 T 10-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 PANTHER PTHR10795 179 325 4.3E-25 T 10-11-2016 IPR015500 Peptidase S8, subtilisin-related CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 PANTHER PTHR10795:SF419 24 141 4.3E-25 T 10-11-2016 CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 PANTHER PTHR10795 24 141 4.3E-25 T 10-11-2016 IPR015500 Peptidase S8, subtilisin-related CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 PRINTS PR00723 Subtilisin serine protease family (S8) signature 289 305 1.0E-10 T 10-11-2016 IPR015500 Peptidase S8, subtilisin-related CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 PRINTS PR00723 Subtilisin serine protease family (S8) signature 76 89 1.0E-10 T 10-11-2016 IPR015500 Peptidase S8, subtilisin-related CJM129_RS07335 6cb58a9f51ddc4120af6528d10900c95 1041 PRINTS PR00723 Subtilisin serine protease family (S8) signature 34 53 1.0E-10 T 10-11-2016 IPR015500 Peptidase S8, subtilisin-related CJM129_RS04785 4f249b95fadf027aa9aee4fb314edf51 246 Pfam PF03883 Protein of unknown function (DUF328) 1 220 2.1E-39 T 10-11-2016 IPR005583 Peroxide stress protein YaaA CJM129_RS04785 4f249b95fadf027aa9aee4fb314edf51 246 PANTHER PTHR30283 2 220 5.1E-19 T 10-11-2016 CJM129_RS04785 4f249b95fadf027aa9aee4fb314edf51 246 PANTHER PTHR30283:SF3 2 220 5.1E-19 T 10-11-2016 CJM129_RS07625 538ee08ee8aca6348327031dca72dc77 344 PANTHER PTHR10366 4 335 6.6E-61 T 10-11-2016 CJM129_RS07625 538ee08ee8aca6348327031dca72dc77 344 Gene3D G3DSA:3.90.25.10 197 338 1.8E-16 T 10-11-2016 CJM129_RS07625 538ee08ee8aca6348327031dca72dc77 344 Gene3D G3DSA:3.40.50.720 2 193 2.0E-41 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07625 538ee08ee8aca6348327031dca72dc77 344 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 326 1.0E-67 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07625 538ee08ee8aca6348327031dca72dc77 344 PANTHER PTHR10366:SF427 4 335 6.6E-61 T 10-11-2016 CJM129_RS07625 538ee08ee8aca6348327031dca72dc77 344 SUPERFAMILY SSF51735 1 334 3.26E-62 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05620 41ba5259a76587fbcb4b6e9d87967889 183 PANTHER PTHR10302 1 154 3.0E-33 T 10-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CJM129_RS05620 41ba5259a76587fbcb4b6e9d87967889 183 PIRSF PIRSF002070 1 161 7.1E-30 T 10-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CJM129_RS05620 41ba5259a76587fbcb4b6e9d87967889 183 Hamap MF_00984 Single-stranded DNA-binding protein. 2 108 32.894 T 10-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CJM129_RS05620 41ba5259a76587fbcb4b6e9d87967889 183 Gene3D G3DSA:2.40.50.140 155 183 4.5E-39 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS05620 41ba5259a76587fbcb4b6e9d87967889 183 Gene3D G3DSA:2.40.50.140 1 118 4.5E-39 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS05620 41ba5259a76587fbcb4b6e9d87967889 183 Pfam PF00436 Single-strand binding protein family 2 104 2.1E-34 T 10-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 CJM129_RS05620 41ba5259a76587fbcb4b6e9d87967889 183 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 183 1.2E-54 T 10-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 CJM129_RS05620 41ba5259a76587fbcb4b6e9d87967889 183 SUPERFAMILY SSF50249 1 183 2.74E-45 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS07830 989341d6984ac03da11de32db89f069a 519 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 349 363 - T 10-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CJM129_RS07830 989341d6984ac03da11de32db89f069a 519 Gene3D G3DSA:3.30.450.90 125 254 1.2E-37 T 10-11-2016 CJM129_RS07830 989341d6984ac03da11de32db89f069a 519 SMART SM00382 282 403 4.8E-6 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS07830 989341d6984ac03da11de32db89f069a 519 Gene3D G3DSA:3.40.50.300 258 518 5.4E-88 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07830 989341d6984ac03da11de32db89f069a 519 PANTHER PTHR30258 70 519 3.3E-142 T 10-11-2016 CJM129_RS07830 989341d6984ac03da11de32db89f069a 519 PANTHER PTHR30258:SF2 70 519 3.3E-142 T 10-11-2016 CJM129_RS07830 989341d6984ac03da11de32db89f069a 519 SUPERFAMILY SSF52540 145 518 1.46E-88 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07830 989341d6984ac03da11de32db89f069a 519 Pfam PF00437 Type II/IV secretion system protein 164 421 1.9E-71 T 10-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 Pfam PF13624 SurA N-terminal domain 1 165 1.2E-41 T 10-11-2016 CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 Pfam PF13145 PPIC-type PPIASE domain 241 360 3.3E-21 T 10-11-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 PANTHER PTHR10657 1 169 3.2E-20 T 10-11-2016 CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 PANTHER PTHR10657 289 380 3.2E-20 T 10-11-2016 CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 PANTHER PTHR10657 199 260 3.2E-20 T 10-11-2016 CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 PANTHER PTHR10657:SF11 1 169 3.2E-20 T 10-11-2016 CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 PANTHER PTHR10657:SF11 289 380 3.2E-20 T 10-11-2016 CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 PANTHER PTHR10657:SF11 199 260 3.2E-20 T 10-11-2016 CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 SUPERFAMILY SSF109998 199 238 1.65E-22 T 10-11-2016 IPR027304 Trigger factor/SurA domain CJM129_RS03350 d26577d1b77c31656f83cc7b7190a0c5 496 SUPERFAMILY SSF109998 41 169 1.65E-22 T 10-11-2016 IPR027304 Trigger factor/SurA domain CJM129_RS05495 5683e52689e95a2ecac4aef7b1c093fd 266 Pfam PF14453 ThiS-like ubiquitin 1 56 1.7E-20 T 10-11-2016 IPR032726 ThiS-like ubiquitin domain CJM129_RS05495 5683e52689e95a2ecac4aef7b1c093fd 266 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 63 262 4.9E-110 T 10-11-2016 IPR012729 Thiamine biosynthesis protein ThiF CJM129_RS05495 5683e52689e95a2ecac4aef7b1c093fd 266 Gene3D G3DSA:3.40.50.720 77 265 6.2E-38 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS05495 5683e52689e95a2ecac4aef7b1c093fd 266 SUPERFAMILY SSF69572 76 265 1.24E-45 T 10-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CJM129_RS05495 5683e52689e95a2ecac4aef7b1c093fd 266 PANTHER PTHR10953 79 189 4.9E-34 T 10-11-2016 CJM129_RS05495 5683e52689e95a2ecac4aef7b1c093fd 266 Pfam PF00899 ThiF family 76 229 3.0E-36 T 10-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 PANTHER PTHR21499 1 400 1.9E-158 T 10-11-2016 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 396 2.6E-142 T 10-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 Gene3D G3DSA:3.40.1160.10 1 243 9.0E-73 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 Pfam PF00696 Amino acid kinase family 1 224 2.4E-53 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 10-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 SUPERFAMILY SSF55021 328 399 1.3E-21 T 10-11-2016 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 PIRSF PIRSF000726 55 400 7.5E-136 T 10-11-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 397 3.6E-122 T 10-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 PANTHER PTHR21499:SF27 1 400 1.9E-158 T 10-11-2016 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 Gene3D G3DSA:3.30.70.260 267 322 2.5E-6 T 10-11-2016 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 Pfam PF13840 ACT domain 331 394 2.2E-15 T 10-11-2016 IPR027795 GATS-like ACT domain CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 SUPERFAMILY SSF53633 3 242 3.67E-75 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 SUPERFAMILY SSF55021 245 323 7.56E-19 T 10-11-2016 CJM129_RS02815 31043dd1ff1bb25699f6363219d0745a 400 Pfam PF01842 ACT domain 265 322 9.3E-11 T 10-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CJM129_RS00510 47cab2e1218a865154af4f04c6d3e2d5 261 Pfam PF13614 AAA domain 3 180 1.2E-65 T 10-11-2016 IPR025669 AAA domain CJM129_RS00510 47cab2e1218a865154af4f04c6d3e2d5 261 Gene3D G3DSA:3.40.50.300 4 260 1.2E-67 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00510 47cab2e1218a865154af4f04c6d3e2d5 261 SUPERFAMILY SSF52540 1 261 2.03E-59 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00510 47cab2e1218a865154af4f04c6d3e2d5 261 PANTHER PTHR13696:SF52 1 260 5.0E-72 T 10-11-2016 CJM129_RS00510 47cab2e1218a865154af4f04c6d3e2d5 261 PANTHER PTHR13696 1 260 5.0E-72 T 10-11-2016 CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 Gene3D G3DSA:3.40.50.720 1 24 2.9E-4 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 Gene3D G3DSA:3.40.50.720 41 153 5.2E-22 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 158 179 - T 10-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 291 30.9 T 10-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 150 287 1.2E-45 T 10-11-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 SUPERFAMILY SSF51735 1 145 6.99E-24 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 PANTHER PTHR11728 40 293 1.9E-75 T 10-11-2016 CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 SUPERFAMILY SSF48179 149 294 1.04E-46 T 10-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 PIRSF PIRSF000114 33 297 1.4E-71 T 10-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 39 130 2.9E-16 T 10-11-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 CJM129_RS06230 2cfbda5d8a61b0103f4858af21f41e9d 297 Gene3D G3DSA:1.10.1040.10 154 295 2.5E-49 T 10-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJM129_RS05440 04dec6aff227ff088255be19eebedca5 239 PANTHER PTHR21367 10 224 7.9E-38 T 10-11-2016 IPR030700 Arginine-tRNA-protein transferase CJM129_RS05440 04dec6aff227ff088255be19eebedca5 239 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 100 224 9.7E-30 T 10-11-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 CJM129_RS05440 04dec6aff227ff088255be19eebedca5 239 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 12 80 5.6E-13 T 10-11-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 CJM129_RS05440 04dec6aff227ff088255be19eebedca5 239 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 31.387 T 10-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic CJM129_RS05440 04dec6aff227ff088255be19eebedca5 239 SUPERFAMILY SSF55729 73 224 1.01E-15 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS05440 04dec6aff227ff088255be19eebedca5 239 PANTHER PTHR21367:SF0 10 224 7.9E-38 T 10-11-2016 CJM129_RS05440 04dec6aff227ff088255be19eebedca5 239 PIRSF PIRSF037208 1 239 3.8E-79 T 10-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic CJM129_RS08805 8315859724f881b66e00bdff0da045b1 167 Gene3D G3DSA:3.40.30.10 8 165 1.5E-15 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS08805 8315859724f881b66e00bdff0da045b1 167 SUPERFAMILY SSF52833 1 164 1.09E-16 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS08805 8315859724f881b66e00bdff0da045b1 167 Pfam PF13728 F plasmid transfer operon protein 48 107 4.0E-7 T 10-11-2016 CJM129_RS03370 4dd94550b26dee744b33b4ce96804e7e 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 2.9E-44 T 10-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJM129_RS03370 4dd94550b26dee744b33b4ce96804e7e 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 2.0E-30 T 10-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJM129_RS03370 4dd94550b26dee744b33b4ce96804e7e 263 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 3.3E-111 T 10-11-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CJM129_RS03370 4dd94550b26dee744b33b4ce96804e7e 263 Pfam PF00460 Flagella basal body rod protein 5 35 9.2E-12 T 10-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJM129_RS03370 4dd94550b26dee744b33b4ce96804e7e 263 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 261 2.3E-23 T 10-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJM129_RS03370 4dd94550b26dee744b33b4ce96804e7e 263 SUPERFAMILY SSF117143 94 223 3.14E-37 T 10-11-2016 CJM129_RS03370 4dd94550b26dee744b33b4ce96804e7e 263 PANTHER PTHR30435 1 263 7.0E-117 T 10-11-2016 CJM129_RS03370 4dd94550b26dee744b33b4ce96804e7e 263 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 10-11-2016 IPR019776 Flagellar basal body rod protein, conserved site CJM129_RS03370 4dd94550b26dee744b33b4ce96804e7e 263 PANTHER PTHR30435:SF19 1 263 7.0E-117 T 10-11-2016 CJM129_RS03265 fd12037140bfdf27fe35b61b4174569c 272 Pfam PF03814 Potassium-transporting ATPase A subunit 1 268 7.7E-108 T 10-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CJM129_RS03265 fd12037140bfdf27fe35b61b4174569c 272 PANTHER PTHR30607 1 272 8.1E-127 T 10-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CJM129_RS04180 852c981c427320c97a7b574f94f6a085 266 PANTHER PTHR36570:SF1 191 231 1.0E-41 T 10-11-2016 CJM129_RS04180 852c981c427320c97a7b574f94f6a085 266 SUPERFAMILY SSF158442 25 152 7.19E-25 T 10-11-2016 CJM129_RS04180 852c981c427320c97a7b574f94f6a085 266 SUPERFAMILY SSF158442 190 216 7.19E-25 T 10-11-2016 CJM129_RS04180 852c981c427320c97a7b574f94f6a085 266 Pfam PF02600 Disulfide bond formation protein DsbB 22 214 8.3E-31 T 10-11-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CJM129_RS04180 852c981c427320c97a7b574f94f6a085 266 PANTHER PTHR36570 15 151 1.0E-41 T 10-11-2016 CJM129_RS04180 852c981c427320c97a7b574f94f6a085 266 PANTHER PTHR36570 191 231 1.0E-41 T 10-11-2016 CJM129_RS04180 852c981c427320c97a7b574f94f6a085 266 PANTHER PTHR36570:SF1 15 151 1.0E-41 T 10-11-2016 CJM129_RS04180 852c981c427320c97a7b574f94f6a085 266 Gene3D G3DSA:1.20.1550.10 190 227 9.7E-65 T 10-11-2016 IPR023380 Disulphide bond formation protein DsbB-like domain CJM129_RS04180 852c981c427320c97a7b574f94f6a085 266 Gene3D G3DSA:1.20.1550.10 13 152 9.7E-65 T 10-11-2016 IPR023380 Disulphide bond formation protein DsbB-like domain CJM129_RS02120 eea63bfd5d93236bf46b3ae10198ccf7 135 SUPERFAMILY SSF50475 1 122 3.18E-15 T 10-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CJM129_RS02120 eea63bfd5d93236bf46b3ae10198ccf7 135 Gene3D G3DSA:2.30.110.10 1 134 4.3E-40 T 10-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CJM129_RS02120 eea63bfd5d93236bf46b3ae10198ccf7 135 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 4 81 3.9E-5 T 10-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CJM129_RS00505 daa38303044cf6deb5eb575e8c2cfcce 217 Gene3D G3DSA:3.30.930.10 4 178 5.2E-34 T 10-11-2016 CJM129_RS00505 daa38303044cf6deb5eb575e8c2cfcce 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 13 123 4.6E-13 T 10-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CJM129_RS00505 daa38303044cf6deb5eb575e8c2cfcce 217 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 9 211 4.4E-33 T 10-11-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CJM129_RS00505 daa38303044cf6deb5eb575e8c2cfcce 217 SUPERFAMILY SSF55681 5 189 7.46E-36 T 10-11-2016 CJM129_RS00505 daa38303044cf6deb5eb575e8c2cfcce 217 PANTHER PTHR12835 7 180 2.8E-22 T 10-11-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 CJM129_RS08375 83b316ff139d6a0c3e85b928a9740cac 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 310 3.0E-22 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS08375 83b316ff139d6a0c3e85b928a9740cac 314 PANTHER PTHR30465:SF24 1 310 1.1E-75 T 10-11-2016 CJM129_RS08375 83b316ff139d6a0c3e85b928a9740cac 314 PANTHER PTHR30465 1 310 1.1E-75 T 10-11-2016 CJM129_RS08375 83b316ff139d6a0c3e85b928a9740cac 314 SUPERFAMILY SSF161098 89 309 3.27E-10 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 PIRSF PIRSF005901 2 188 1.0E-63 T 10-11-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 4.5E-23 T 10-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 SMART SM01185 69 123 7.0E-28 T 10-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 Gene3D G3DSA:2.40.50.140 131 187 1.4E-23 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 SMART SM00841 131 186 9.3E-28 T 10-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 Gene3D G3DSA:2.40.50.140 66 129 3.1E-27 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 SUPERFAMILY SSF50249 67 131 1.5E-19 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 Gene3D G3DSA:2.30.30.30 4 64 2.6E-28 T 10-11-2016 IPR014722 Ribosomal protein L2 domain 2 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 3.1E-24 T 10-11-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 PANTHER PTHR30053 1 188 1.0E-80 T 10-11-2016 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 SUPERFAMILY SSF50249 131 187 2.57E-16 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 47.404 T 10-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 SUPERFAMILY SSF50104 2 65 1.55E-21 T 10-11-2016 IPR008991 Translation protein SH3-like domain CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.1E-20 T 10-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 CJM129_RS02645 d4582be1acf264455af478d18b41ce37 189 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.3E-75 T 10-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 CJM129_RS06450 3ee79f935d49a12052a1b07609c03fb5 364 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 28 357 2.8E-92 T 10-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CJM129_RS06450 3ee79f935d49a12052a1b07609c03fb5 364 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 361 26.552 T 10-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 CJM129_RS06450 3ee79f935d49a12052a1b07609c03fb5 364 PANTHER PTHR30004 258 360 1.6E-59 T 10-11-2016 CJM129_RS06450 3ee79f935d49a12052a1b07609c03fb5 364 PANTHER PTHR30004 1 235 1.6E-59 T 10-11-2016 CJM129_RS06450 3ee79f935d49a12052a1b07609c03fb5 364 SUPERFAMILY SSF53659 2 239 5.12E-65 T 10-11-2016 CJM129_RS06450 3ee79f935d49a12052a1b07609c03fb5 364 SUPERFAMILY SSF53659 270 362 5.12E-65 T 10-11-2016 CJM129_RS06450 3ee79f935d49a12052a1b07609c03fb5 364 Gene3D G3DSA:3.40.718.10 1 360 1.3E-105 T 10-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 CJM129_RS06450 3ee79f935d49a12052a1b07609c03fb5 364 PANTHER PTHR30004:SF6 258 360 1.6E-59 T 10-11-2016 CJM129_RS06450 3ee79f935d49a12052a1b07609c03fb5 364 PANTHER PTHR30004:SF6 1 235 1.6E-59 T 10-11-2016 CJM129_RS01635 1c4f03876bccfb207b1f12d6a3ca3dc5 261 Pfam PF01925 Sulfite exporter TauE/SafE 9 245 1.3E-36 T 10-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CJM129_RS01635 1c4f03876bccfb207b1f12d6a3ca3dc5 261 PANTHER PTHR30269 1 257 7.2E-32 T 10-11-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 CJM129_RS03635 ee309d450e013148f35fd48d20eebb7b 227 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 153 226 3.5E-15 T 10-11-2016 IPR006260 TonB, C-terminal GO:0006810 CJM129_RS03635 ee309d450e013148f35fd48d20eebb7b 227 SUPERFAMILY SSF74653 128 227 2.35E-11 T 10-11-2016 CJM129_RS03635 ee309d450e013148f35fd48d20eebb7b 227 PRINTS PR01374 Gram-negative bacterial tonB protein signature 90 100 5.9E-6 T 10-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CJM129_RS03635 ee309d450e013148f35fd48d20eebb7b 227 PRINTS PR01374 Gram-negative bacterial tonB protein signature 147 168 5.9E-6 T 10-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CJM129_RS03635 ee309d450e013148f35fd48d20eebb7b 227 PRINTS PR01374 Gram-negative bacterial tonB protein signature 168 186 5.9E-6 T 10-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CJM129_RS03635 ee309d450e013148f35fd48d20eebb7b 227 Gene3D G3DSA:3.30.1150.10 117 226 1.1E-8 T 10-11-2016 CJM129_RS03635 ee309d450e013148f35fd48d20eebb7b 227 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 154 226 1.1E-19 T 10-11-2016 IPR006260 TonB, C-terminal GO:0006810 CJM129_RS08795 09919355776c2817789c668550d9b978 216 SMART SM00382 30 216 1.3E-8 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS08795 09919355776c2817789c668550d9b978 216 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS08795 09919355776c2817789c668550d9b978 216 PANTHER PTHR24220:SF433 7 213 4.0E-99 T 10-11-2016 CJM129_RS08795 09919355776c2817789c668550d9b978 216 Pfam PF00005 ABC transporter 21 166 4.9E-37 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS08795 09919355776c2817789c668550d9b978 216 Gene3D G3DSA:3.40.50.300 3 215 8.0E-71 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08795 09919355776c2817789c668550d9b978 216 SUPERFAMILY SSF52540 5 215 9.8E-66 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08795 09919355776c2817789c668550d9b978 216 PANTHER PTHR24220 7 213 4.0E-99 T 10-11-2016 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 10-11-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 Pfam PF00549 CoA-ligase 151 267 2.3E-14 T 10-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.4E-27 T 10-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.4E-27 T 10-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.4E-27 T 10-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.4E-27 T 10-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 Gene3D G3DSA:3.40.50.261 120 287 2.3E-64 T 10-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 3.0E-124 T 10-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 SUPERFAMILY SSF52210 123 281 2.75E-48 T 10-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 Pfam PF02629 CoA binding domain 6 99 2.4E-27 T 10-11-2016 IPR003781 CoA-binding GO:0048037 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 PANTHER PTHR11117 1 288 1.2E-154 T 10-11-2016 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 Gene3D G3DSA:3.40.50.720 2 119 2.8E-51 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 SUPERFAMILY SSF51735 1 122 8.44E-40 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 SMART SM00881 4 100 1.1E-33 T 10-11-2016 IPR003781 CoA-binding GO:0048037 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 PIRSF PIRSF001553 1 289 9.0E-127 T 10-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CJM129_RS02555 5d340cb64acd6ba953bcb89cdf12329c 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 10-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 Gene3D G3DSA:2.30.30.60 431 479 1.2E-18 T 10-11-2016 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 PANTHER PTHR30566 245 528 5.3E-60 T 10-11-2016 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 SUPERFAMILY SSF50182 414 480 1.67E-18 T 10-11-2016 IPR010920 LSM domain CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 PANTHER PTHR30566:SF5 556 615 5.3E-60 T 10-11-2016 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 PANTHER PTHR30566:SF5 245 528 5.3E-60 T 10-11-2016 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 SUPERFAMILY SSF82861 329 413 2.48E-12 T 10-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 Pfam PF00924 Mechanosensitive ion channel 372 603 5.2E-58 T 10-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 SUPERFAMILY SSF82689 554 615 2.62E-12 T 10-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 SUPERFAMILY SSF82689 486 525 2.62E-12 T 10-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 Gene3D G3DSA:3.30.70.100 486 601 1.1E-8 T 10-11-2016 CJM129_RS01155 4365c47247f9699486c7a700ec830982 627 PANTHER PTHR30566 556 615 5.3E-60 T 10-11-2016 CJM129_RS02165 bfbd1f33a3eaa7bcf1a0742984186688 198 Gene3D G3DSA:3.90.79.10 4 190 1.6E-44 T 10-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJM129_RS02165 bfbd1f33a3eaa7bcf1a0742984186688 198 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 10 164 1.7E-37 T 10-11-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 CJM129_RS02165 bfbd1f33a3eaa7bcf1a0742984186688 198 SUPERFAMILY SSF55811 4 188 3.38E-32 T 10-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJM129_RS02165 bfbd1f33a3eaa7bcf1a0742984186688 198 PANTHER PTHR11839:SF1 14 169 7.4E-36 T 10-11-2016 CJM129_RS02165 bfbd1f33a3eaa7bcf1a0742984186688 198 PANTHER PTHR11839 14 169 7.4E-36 T 10-11-2016 CJM129_RS01620 4184dd1ffaf943145478d2b0d975798a 335 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 314 3.0E-46 T 10-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CJM129_RS01620 4184dd1ffaf943145478d2b0d975798a 335 PANTHER PTHR12304 1 323 1.0E-52 T 10-11-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CJM129_RS01620 4184dd1ffaf943145478d2b0d975798a 335 SUPERFAMILY SSF53590 2 320 2.35E-65 T 10-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CJM129_RS01620 4184dd1ffaf943145478d2b0d975798a 335 Gene3D G3DSA:3.90.245.10 2 321 5.5E-65 T 10-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CJM129_RS02515 9b49f20b65e590664e4c774ec00a3dda 98 PANTHER PTHR34653 1 98 5.9E-14 T 10-11-2016 CJM129_RS02515 9b49f20b65e590664e4c774ec00a3dda 98 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 11 98 1.3E-25 T 10-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJM129_RS02515 9b49f20b65e590664e4c774ec00a3dda 98 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 98 17.537 T 10-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJM129_RS02515 9b49f20b65e590664e4c774ec00a3dda 98 Pfam PF02049 Flagellar hook-basal body complex protein FliE 13 98 5.8E-25 T 10-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJM129_RS02515 9b49f20b65e590664e4c774ec00a3dda 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 62 78 3.8E-11 T 10-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJM129_RS02515 9b49f20b65e590664e4c774ec00a3dda 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 83 96 3.8E-11 T 10-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJM129_RS02515 9b49f20b65e590664e4c774ec00a3dda 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 28 44 3.8E-11 T 10-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJM129_RS06645 ce584e7ca3bfd352abca40f7f321ab11 410 SUPERFAMILY SSF49265 53 231 9.9E-15 T 10-11-2016 IPR003961 Fibronectin type III GO:0005515 CJM129_RS06645 ce584e7ca3bfd352abca40f7f321ab11 410 Gene3D G3DSA:2.60.40.10 236 313 4.4E-9 T 10-11-2016 IPR013783 Immunoglobulin-like fold CJM129_RS06645 ce584e7ca3bfd352abca40f7f321ab11 410 Gene3D G3DSA:2.60.40.10 328 409 8.7E-9 T 10-11-2016 IPR013783 Immunoglobulin-like fold CJM129_RS06645 ce584e7ca3bfd352abca40f7f321ab11 410 Gene3D G3DSA:2.60.40.10 145 226 3.5E-8 T 10-11-2016 IPR013783 Immunoglobulin-like fold CJM129_RS06645 ce584e7ca3bfd352abca40f7f321ab11 410 Gene3D G3DSA:2.60.40.10 47 121 2.7E-10 T 10-11-2016 IPR013783 Immunoglobulin-like fold CJM129_RS06645 ce584e7ca3bfd352abca40f7f321ab11 410 SUPERFAMILY SSF49265 323 406 1.11E-5 T 10-11-2016 IPR003961 Fibronectin type III GO:0005515 CJM129_RS06645 ce584e7ca3bfd352abca40f7f321ab11 410 SMART SM00060 40 121 3.4 T 10-11-2016 IPR003961 Fibronectin type III GO:0005515 CJM129_RS06645 ce584e7ca3bfd352abca40f7f321ab11 410 SMART SM00060 135 218 0.57 T 10-11-2016 IPR003961 Fibronectin type III GO:0005515 CJM129_RS06645 ce584e7ca3bfd352abca40f7f321ab11 410 SMART SM00060 231 399 0.035 T 10-11-2016 IPR003961 Fibronectin type III GO:0005515 CJM129_RS00130 6aee00775ce7bf7f3385be43b3e716d0 543 Pfam PF00117 Glutamine amidotransferase class-I 302 535 1.2E-54 T 10-11-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 CJM129_RS00130 6aee00775ce7bf7f3385be43b3e716d0 543 Gene3D G3DSA:3.40.50.300 2 284 1.0E-131 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00130 6aee00775ce7bf7f3385be43b3e716d0 543 SUPERFAMILY SSF52540 4 271 5.31E-118 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00130 6aee00775ce7bf7f3385be43b3e716d0 543 Hamap MF_01227 CTP synthase [pyrG]. 4 541 50.785 T 10-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CJM129_RS00130 6aee00775ce7bf7f3385be43b3e716d0 543 PANTHER PTHR11550 1 543 0.0 T 10-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CJM129_RS00130 6aee00775ce7bf7f3385be43b3e716d0 543 Gene3D G3DSA:3.40.50.880 288 541 2.8E-95 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS00130 6aee00775ce7bf7f3385be43b3e716d0 543 SUPERFAMILY SSF52317 289 541 2.29E-74 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS00130 6aee00775ce7bf7f3385be43b3e716d0 543 Pfam PF06418 CTP synthase N-terminus 5 267 8.7E-123 T 10-11-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CJM129_RS00130 6aee00775ce7bf7f3385be43b3e716d0 543 TIGRFAM TIGR00337 PyrG: CTP synthase 3 536 1.4E-243 T 10-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 CJM129_RS07875 643f7f9d78b45eee4d1acdfdb1bb5b5d 141 PANTHER PTHR11545 2 136 3.5E-60 T 10-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CJM129_RS07875 643f7f9d78b45eee4d1acdfdb1bb5b5d 141 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 137 3.6E-56 T 10-11-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 CJM129_RS07875 643f7f9d78b45eee4d1acdfdb1bb5b5d 141 Gene3D G3DSA:3.90.1180.10 4 135 1.3E-55 T 10-11-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CJM129_RS07875 643f7f9d78b45eee4d1acdfdb1bb5b5d 141 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 14 137 26.955 T 10-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CJM129_RS07875 643f7f9d78b45eee4d1acdfdb1bb5b5d 141 PIRSF PIRSF002181 1 140 4.0E-47 T 10-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CJM129_RS07875 643f7f9d78b45eee4d1acdfdb1bb5b5d 141 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 10-11-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CJM129_RS07875 643f7f9d78b45eee4d1acdfdb1bb5b5d 141 SUPERFAMILY SSF52161 2 135 1.96E-51 T 10-11-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 CJM129_RS07875 643f7f9d78b45eee4d1acdfdb1bb5b5d 141 Pfam PF00572 Ribosomal protein L13 13 135 1.4E-50 T 10-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 Gene3D G3DSA:3.50.50.60 2 136 1.6E-23 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 278 296 9.9E-21 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 155 179 9.9E-21 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 210 226 9.9E-21 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 9.9E-21 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 120 128 9.9E-21 T 10-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PANTHER PTHR22912 53 292 1.4E-19 T 10-11-2016 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PANTHER PTHR22912 1 33 1.4E-19 T 10-11-2016 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 290 8.9E-19 T 10-11-2016 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 8.9E-19 T 10-11-2016 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.9E-19 T 10-11-2016 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 8.9E-19 T 10-11-2016 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 287 6.4E-53 T 10-11-2016 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 Gene3D G3DSA:3.50.50.60 156 236 4.1E-12 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PANTHER PTHR22912:SF106 53 292 1.4E-19 T 10-11-2016 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 PANTHER PTHR22912:SF106 1 33 1.4E-19 T 10-11-2016 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 SUPERFAMILY SSF51905 1 305 4.53E-33 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS02685 cb22a208247d0288677e229c8b214563 311 Gene3D G3DSA:3.50.50.60 237 292 3.1E-9 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 PANTHER PTHR11938 14 1478 0.0 T 10-11-2016 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 SUPERFAMILY SSF56235 25 441 9.83E-145 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 PANTHER PTHR11938:SF1 14 1478 0.0 T 10-11-2016 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 Gene3D G3DSA:3.20.20.70 447 792 5.1E-104 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 Pfam PF01493 GXGXG motif 1246 1431 1.0E-71 T 10-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 Gene3D G3DSA:2.160.20.60 1221 1483 9.0E-90 T 10-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 Pfam PF01645 Conserved region in glutamate synthase 806 1166 1.8E-151 T 10-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 SUPERFAMILY SSF51395 443 1183 2.43E-248 T 10-11-2016 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 Gene3D G3DSA:3.60.20.10 25 444 1.8E-172 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 Pfam PF00310 Glutamine amidotransferases class-II 25 439 2.4E-169 T 10-11-2016 IPR017932 Glutamine amidotransferase type 2 domain CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 Pfam PF04898 Glutamate synthase central domain 467 745 1.7E-110 T 10-11-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 Gene3D G3DSA:3.20.20.70 818 1205 1.9E-169 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS00035 501eabbd1e0dd59c02e4c76465b76e17 1496 SUPERFAMILY SSF69336 1222 1475 1.07E-79 T 10-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 Gene3D G3DSA:1.10.287.40 1 101 1.2E-12 T 10-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 Gene3D G3DSA:3.30.930.10 102 410 4.3E-134 T 10-11-2016 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 PRINTS PR00981 Seryl-tRNA synthetase signature 259 271 1.6E-29 T 10-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 PRINTS PR00981 Seryl-tRNA synthetase signature 271 284 1.6E-29 T 10-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 PRINTS PR00981 Seryl-tRNA synthetase signature 328 344 1.6E-29 T 10-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 PRINTS PR00981 Seryl-tRNA synthetase signature 311 324 1.6E-29 T 10-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 PRINTS PR00981 Seryl-tRNA synthetase signature 346 362 1.6E-29 T 10-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 SUPERFAMILY SSF46589 1 109 8.37E-21 T 10-11-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 410 9.5E-168 T 10-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 215 394 9.5E-39 T 10-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 SUPERFAMILY SSF55681 113 410 3.73E-92 T 10-11-2016 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 104 5.6E-19 T 10-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 411 37.72 T 10-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 PANTHER PTHR11778 1 410 1.8E-187 T 10-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CJM129_RS01860 abdce2780c25c928f063391b6b635bd3 411 PIRSF PIRSF001529 1 411 4.3E-164 T 10-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 CJM129_RS06325 41b7b9931b964c15cd9e34f93ef8dd7d 386 Gene3D G3DSA:2.70.70.10 197 338 6.0E-50 T 10-11-2016 CJM129_RS06325 41b7b9931b964c15cd9e34f93ef8dd7d 386 SUPERFAMILY SSF51261 89 335 3.14E-66 T 10-11-2016 IPR011055 Duplicated hybrid motif CJM129_RS06325 41b7b9931b964c15cd9e34f93ef8dd7d 386 Pfam PF01551 Peptidase family M23 238 333 2.7E-35 T 10-11-2016 IPR016047 Peptidase M23 CJM129_RS06325 41b7b9931b964c15cd9e34f93ef8dd7d 386 PANTHER PTHR21666 31 337 4.5E-46 T 10-11-2016 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 PANTHER PTHR11063 1 410 3.2E-147 T 10-11-2016 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 Gene3D G3DSA:3.40.309.10 216 367 4.9E-39 T 10-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 409 34.118 T 10-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 PIRSF PIRSF000151 1 410 6.9E-160 T 10-11-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 PANTHER PTHR11063:SF8 1 410 3.2E-147 T 10-11-2016 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 SUPERFAMILY SSF53720 2 409 1.19E-93 T 10-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 Pfam PF00171 Aldehyde dehydrogenase family 12 282 3.8E-10 T 10-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 Gene3D G3DSA:3.40.605.10 368 409 2.8E-82 T 10-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 Gene3D G3DSA:3.40.605.10 2 213 2.8E-82 T 10-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 316 338 - T 10-11-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CJM129_RS02680 55796c96852930c28f438f6d5ffbc1c1 410 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 399 5.0E-125 T 10-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CJM129_RS07680 b84d36040886794a1fdcb28da1cf250e 450 Gene3D G3DSA:2.30.38.10 302 351 2.0E-4 T 10-11-2016 CJM129_RS07680 b84d36040886794a1fdcb28da1cf250e 450 Pfam PF00501 AMP-binding enzyme 132 357 3.9E-30 T 10-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJM129_RS07680 b84d36040886794a1fdcb28da1cf250e 450 Gene3D G3DSA:3.40.50.980 145 284 5.0E-22 T 10-11-2016 CJM129_RS07680 b84d36040886794a1fdcb28da1cf250e 450 ProSitePatterns PS00455 Putative AMP-binding domain signature. 134 145 - T 10-11-2016 IPR020845 AMP-binding, conserved site CJM129_RS07680 b84d36040886794a1fdcb28da1cf250e 450 Gene3D G3DSA:3.40.50.980 12 144 1.7E-6 T 10-11-2016 CJM129_RS07680 b84d36040886794a1fdcb28da1cf250e 450 SUPERFAMILY SSF56801 10 449 4.32E-65 T 10-11-2016 CJM129_RS07680 b84d36040886794a1fdcb28da1cf250e 450 PANTHER PTHR24096 133 449 1.5E-50 T 10-11-2016 CJM129_RS07680 b84d36040886794a1fdcb28da1cf250e 450 Gene3D G3DSA:3.30.300.30 352 447 9.4E-16 T 10-11-2016 CJM129_RS07680 b84d36040886794a1fdcb28da1cf250e 450 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 445 2.5E-10 T 10-11-2016 IPR025110 AMP-binding enzyme C-terminal domain CJM129_RS00080 4336de41e05f8b27dae8b19822d1c510 508 SUPERFAMILY SSF158442 16 129 1.26E-16 T 10-11-2016 CJM129_RS00080 4336de41e05f8b27dae8b19822d1c510 508 SUPERFAMILY SSF63829 378 500 1.73E-6 T 10-11-2016 CJM129_RS00080 4336de41e05f8b27dae8b19822d1c510 508 Gene3D G3DSA:2.130.10.10 371 502 9.8E-4 T 10-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJM129_RS00080 4336de41e05f8b27dae8b19822d1c510 508 Gene3D G3DSA:1.20.1550.10 14 104 2.6E-6 T 10-11-2016 IPR023380 Disulphide bond formation protein DsbB-like domain CJM129_RS00080 4336de41e05f8b27dae8b19822d1c510 508 Pfam PF02600 Disulfide bond formation protein DsbB 14 95 1.9E-12 T 10-11-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 409 1.6E-27 T 10-11-2016 IPR000160 GGDEF domain CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 412 3.7E-29 T 10-11-2016 IPR000160 GGDEF domain CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 PANTHER PTHR26402 123 230 1.8E-18 T 10-11-2016 CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 SUPERFAMILY SSF55073 259 412 2.9E-29 T 10-11-2016 IPR029787 Nucleotide cyclase CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 Gene3D G3DSA:3.40.50.2300 3 104 5.9E-13 T 10-11-2016 CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 SMART SM00448 3 111 1.2E-7 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 SMART SM00448 123 236 3.1E-11 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 SMART SM00267 245 413 4.8E-15 T 10-11-2016 IPR000160 GGDEF domain CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 Gene3D G3DSA:3.30.70.270 256 412 2.5E-31 T 10-11-2016 CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 SUPERFAMILY SSF52172 132 243 1.11E-19 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 Gene3D G3DSA:3.40.50.2300 135 242 1.1E-19 T 10-11-2016 CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 SUPERFAMILY SSF52172 3 102 3.42E-14 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 Pfam PF00072 Response regulator receiver domain 135 231 2.7E-15 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS03110 abf6f567281faa3614e7b96d0ce5fc7d 414 Pfam PF00072 Response regulator receiver domain 5 104 2.0E-7 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS07190 598ff33227803fc5ffe2b97682828390 607 Pfam PF01973 Protein of unknown function DUF115 204 371 1.2E-41 T 10-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CJM129_RS07190 598ff33227803fc5ffe2b97682828390 607 PANTHER PTHR41786 1 603 4.0E-12 T 10-11-2016 CJM129_RS07190 598ff33227803fc5ffe2b97682828390 607 Gene3D G3DSA:3.90.1480.10 231 464 3.2E-11 T 10-11-2016 CJM129_RS07190 598ff33227803fc5ffe2b97682828390 607 PANTHER PTHR41786:SF1 1 603 4.0E-12 T 10-11-2016 CJM129_RS00435 3f89d6b70ecc4d99cc8e17c227347097 231 PANTHER PTHR21198 1 223 6.2E-71 T 10-11-2016 CJM129_RS00435 3f89d6b70ecc4d99cc8e17c227347097 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 220 2.9E-56 T 10-11-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS00435 3f89d6b70ecc4d99cc8e17c227347097 231 Gene3D G3DSA:3.40.50.1860 115 215 1.5E-33 T 10-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS00435 3f89d6b70ecc4d99cc8e17c227347097 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 1.8E-65 T 10-11-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CJM129_RS00435 3f89d6b70ecc4d99cc8e17c227347097 231 PANTHER PTHR21198:SF7 1 223 6.2E-71 T 10-11-2016 CJM129_RS00435 3f89d6b70ecc4d99cc8e17c227347097 231 SUPERFAMILY SSF53681 1 114 4.09E-35 T 10-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS00435 3f89d6b70ecc4d99cc8e17c227347097 231 SUPERFAMILY SSF53681 118 227 2.29E-29 T 10-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS00435 3f89d6b70ecc4d99cc8e17c227347097 231 Gene3D G3DSA:3.40.50.1860 1 114 3.6E-41 T 10-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 CJM129_RS04065 987e252e455811d44f5eb9d3d1ed2f10 163 PANTHER PTHR40072:SF2 5 121 4.4E-12 T 10-11-2016 CJM129_RS04065 987e252e455811d44f5eb9d3d1ed2f10 163 SUPERFAMILY SSF52540 5 153 3.13E-19 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04065 987e252e455811d44f5eb9d3d1ed2f10 163 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 119 3.4E-23 T 10-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CJM129_RS04065 987e252e455811d44f5eb9d3d1ed2f10 163 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 154 7.8E-50 T 10-11-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CJM129_RS04065 987e252e455811d44f5eb9d3d1ed2f10 163 Gene3D G3DSA:3.40.50.300 4 158 1.7E-38 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS04065 987e252e455811d44f5eb9d3d1ed2f10 163 PANTHER PTHR40072 5 121 4.4E-12 T 10-11-2016 CJM129_RS06300 05ed6fd84fd34644ea1ed8df7f20d40c 185 PANTHER PTHR30353 1 179 1.4E-20 T 10-11-2016 IPR032818 DedA family CJM129_RS06300 05ed6fd84fd34644ea1ed8df7f20d40c 185 Pfam PF09335 SNARE associated Golgi protein 28 143 2.9E-13 T 10-11-2016 IPR032816 SNARE associated Golgi protein CJM129_RS06375 f83c35a114a1e4c37bb4917ab4fbd58c 82 SUPERFAMILY SSF47598 6 47 2.89E-9 T 10-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 CJM129_RS06375 f83c35a114a1e4c37bb4917ab4fbd58c 82 Pfam PF12651 Ribbon-helix-helix domain 6 44 8.8E-7 T 10-11-2016 CJM129_RS06375 f83c35a114a1e4c37bb4917ab4fbd58c 82 Gene3D G3DSA:1.25.40.40 14 81 1.8E-4 T 10-11-2016 IPR003204 Cytochrome c oxidase, subunit Va/VI GO:0004129|GO:0005743 CJM129_RS07360 803ee9ca63b5700d05db47f5cd2ba933 147 SUPERFAMILY SSF53271 2 138 8.43E-27 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS07360 803ee9ca63b5700d05db47f5cd2ba933 147 Pfam PF00156 Phosphoribosyl transferase domain 7 144 1.1E-19 T 10-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 CJM129_RS07360 803ee9ca63b5700d05db47f5cd2ba933 147 Gene3D G3DSA:3.40.50.2020 2 145 5.6E-28 T 10-11-2016 IPR029057 Phosphoribosyltransferase-like CJM129_RS00305 06202a3d4518773a0364e0fd20df5e27 198 Pfam PF03412 Peptidase C39 family 34 174 2.3E-16 T 10-11-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CJM129_RS08490 5f98de73b528bec7ad642293c03887d2 368 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 95 338 5.9E-92 T 10-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein CJM129_RS08490 5f98de73b528bec7ad642293c03887d2 368 PANTHER PTHR23264:SF19 1 348 2.7E-129 T 10-11-2016 CJM129_RS08490 5f98de73b528bec7ad642293c03887d2 368 SUPERFAMILY SSF52540 98 349 2.06E-56 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08490 5f98de73b528bec7ad642293c03887d2 368 Pfam PF01883 Domain of unknown function DUF59 2 66 5.8E-11 T 10-11-2016 IPR002744 Domain of unknown function DUF59 CJM129_RS08490 5f98de73b528bec7ad642293c03887d2 368 SUPERFAMILY SSF117916 2 90 2.03E-14 T 10-11-2016 CJM129_RS08490 5f98de73b528bec7ad642293c03887d2 368 Gene3D G3DSA:3.40.50.300 91 337 3.3E-91 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08490 5f98de73b528bec7ad642293c03887d2 368 PANTHER PTHR23264 1 348 2.7E-129 T 10-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein CJM129_RS08490 5f98de73b528bec7ad642293c03887d2 368 Hamap MF_02040 Iron-sulfur cluster carrier protein. 90 339 34.941 T 10-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 SUPERFAMILY SSF52540 4 427 2.35E-141 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 SUPERFAMILY SSF52540 458 626 2.35E-141 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 Pfam PF13361 UvrD-like helicase C-terminal domain 279 606 4.2E-71 T 10-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 PANTHER PTHR11070:SF7 2 641 8.8E-160 T 10-11-2016 CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 Gene3D G3DSA:1.10.486.10 390 536 2.4E-36 T 10-11-2016 CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 Gene3D G3DSA:3.40.50.300 6 277 4.6E-70 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 Gene3D G3DSA:3.40.50.300 282 389 2.3E-59 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 Gene3D G3DSA:3.40.50.300 546 626 2.3E-59 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 PANTHER PTHR11070 2 641 8.8E-160 T 10-11-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 CJM129_RS05770 b8ac5874a11077d288615a2f7d771a53 691 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 274 2.0E-57 T 10-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 1.9E-40 T 10-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 PANTHER PTHR15893 1 84 5.3E-48 T 10-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 7.5E-39 T 10-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 7.5E-39 T 10-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 7.5E-39 T 10-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 Gene3D G3DSA:2.40.50.100 20 83 1.7E-33 T 10-11-2016 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 10-11-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 SUPERFAMILY SSF110324 2 83 6.98E-34 T 10-11-2016 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 2.0E-17 T 10-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 Pfam PF01016 Ribosomal L27 protein 2 81 4.0E-38 T 10-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00485 1ba20290681d452ae57142ee5fe2b3b1 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.113 T 10-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS05665 998f72e1042f34d3a4ff57e1c9c99b9b 209 Gene3D G3DSA:3.40.50.10090 126 186 1.2E-4 T 10-11-2016 CJM129_RS05665 998f72e1042f34d3a4ff57e1c9c99b9b 209 Gene3D G3DSA:3.40.50.10090 32 125 1.8E-14 T 10-11-2016 CJM129_RS05665 998f72e1042f34d3a4ff57e1c9c99b9b 209 SUPERFAMILY SSF69618 16 205 1.83E-33 T 10-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS05665 998f72e1042f34d3a4ff57e1c9c99b9b 209 Pfam PF02602 Uroporphyrinogen-III synthase HemD 33 194 3.8E-24 T 10-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 CJM129_RS03460 f76b0196e5a2f6c6ed124c65242d6f6f 446 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 2 444 9.0E-200 T 10-11-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CJM129_RS03460 f76b0196e5a2f6c6ed124c65242d6f6f 446 PANTHER PTHR21337 2 445 4.3E-259 T 10-11-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CJM129_RS03460 f76b0196e5a2f6c6ed124c65242d6f6f 446 Pfam PF01474 Class-II DAHP synthetase family 2 438 2.0E-195 T 10-11-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 CJM129_RS03460 f76b0196e5a2f6c6ed124c65242d6f6f 446 SUPERFAMILY SSF51569 2 442 4.61E-189 T 10-11-2016 CJM129_RS01755 e15708c4a185947bb898affb93e4e79e 210 SUPERFAMILY SSF46689 6 77 1.49E-13 T 10-11-2016 IPR009057 Homeodomain-like GO:0003677 CJM129_RS01755 e15708c4a185947bb898affb93e4e79e 210 PANTHER PTHR30055:SF11 1 175 5.0E-13 T 10-11-2016 CJM129_RS01755 e15708c4a185947bb898affb93e4e79e 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 64 6.7E-10 T 10-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJM129_RS01755 e15708c4a185947bb898affb93e4e79e 210 PANTHER PTHR30055 1 175 5.0E-13 T 10-11-2016 CJM129_RS01755 e15708c4a185947bb898affb93e4e79e 210 Gene3D G3DSA:1.10.10.60 6 60 7.4E-16 T 10-11-2016 IPR009057 Homeodomain-like GO:0003677 CJM129_RS01755 e15708c4a185947bb898affb93e4e79e 210 Gene3D G3DSA:1.10.357.10 61 207 9.9E-12 T 10-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 CJM129_RS08675 14407f6db719e4c71d5247aa728c2b00 90 SUPERFAMILY SSF117916 3 83 4.36E-22 T 10-11-2016 CJM129_RS08675 14407f6db719e4c71d5247aa728c2b00 90 Pfam PF01106 NifU-like domain 13 77 2.5E-19 T 10-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CJM129_RS08675 14407f6db719e4c71d5247aa728c2b00 90 PANTHER PTHR11178 22 78 3.2E-12 T 10-11-2016 CJM129_RS08675 14407f6db719e4c71d5247aa728c2b00 90 PANTHER PTHR11178:SF15 22 78 3.2E-12 T 10-11-2016 CJM129_RS08675 14407f6db719e4c71d5247aa728c2b00 90 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 17 78 9.0E-29 T 10-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CJM129_RS08285 f1ee1db2ecface7f32870e643f2c82c8 788 SMART SM00028 627 659 450.0 T 10-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CJM129_RS08285 f1ee1db2ecface7f32870e643f2c82c8 788 SMART SM00028 740 773 8.3 T 10-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CJM129_RS08285 f1ee1db2ecface7f32870e643f2c82c8 788 SMART SM00028 328 361 9.8 T 10-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 CJM129_RS08285 f1ee1db2ecface7f32870e643f2c82c8 788 Gene3D G3DSA:1.25.40.10 565 659 8.8E-4 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS08285 f1ee1db2ecface7f32870e643f2c82c8 788 Gene3D G3DSA:1.25.40.10 724 772 8.8E-4 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS08285 f1ee1db2ecface7f32870e643f2c82c8 788 Gene3D G3DSA:1.25.40.10 328 428 1.6E-5 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS08285 f1ee1db2ecface7f32870e643f2c82c8 788 SUPERFAMILY SSF48452 563 660 1.29E-5 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS08285 f1ee1db2ecface7f32870e643f2c82c8 788 SUPERFAMILY SSF48452 296 425 1.98E-6 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS05605 b29a1ed68319c53b4b94810611fd4a20 368 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 23 183 5.1E-52 T 10-11-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CJM129_RS05605 b29a1ed68319c53b4b94810611fd4a20 368 SUPERFAMILY SSF50156 114 204 7.23E-14 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS05605 b29a1ed68319c53b4b94810611fd4a20 368 PANTHER PTHR22939 144 367 2.4E-59 T 10-11-2016 CJM129_RS05605 b29a1ed68319c53b4b94810611fd4a20 368 Gene3D G3DSA:2.30.42.10 109 206 5.4E-16 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS05605 b29a1ed68319c53b4b94810611fd4a20 368 Pfam PF02163 Peptidase family M50 25 353 1.3E-72 T 10-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 CJM129_RS05605 b29a1ed68319c53b4b94810611fd4a20 368 PANTHER PTHR22939:SF78 144 367 2.4E-59 T 10-11-2016 CJM129_RS05605 b29a1ed68319c53b4b94810611fd4a20 368 SMART SM00228 134 196 1.2E-4 T 10-11-2016 IPR001478 PDZ domain GO:0005515 CJM129_RS01655 d92784adc481fe6aa1f6c1af43897c62 199 SUPERFAMILY SSF51366 3 197 1.73E-43 T 10-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJM129_RS01655 d92784adc481fe6aa1f6c1af43897c62 199 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 195 7.3E-37 T 10-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 CJM129_RS01655 d92784adc481fe6aa1f6c1af43897c62 199 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 199 30.619 T 10-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 CJM129_RS01655 d92784adc481fe6aa1f6c1af43897c62 199 PANTHER PTHR22854:SF6 1 198 1.8E-35 T 10-11-2016 CJM129_RS01655 d92784adc481fe6aa1f6c1af43897c62 199 PANTHER PTHR22854 1 198 1.8E-35 T 10-11-2016 CJM129_RS01655 d92784adc481fe6aa1f6c1af43897c62 199 Gene3D G3DSA:3.20.20.70 3 198 1.1E-53 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS09030 0860721238fa0485c23bb154273e3077 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.642 T 10-11-2016 IPR023053 Ribosomal protein S14, type Z CJM129_RS09030 0860721238fa0485c23bb154273e3077 61 SUPERFAMILY SSF57716 3 61 9.27E-21 T 10-11-2016 CJM129_RS09030 0860721238fa0485c23bb154273e3077 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 1.8E-22 T 10-11-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09030 0860721238fa0485c23bb154273e3077 61 PANTHER PTHR19836 12 61 4.5E-31 T 10-11-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09030 0860721238fa0485c23bb154273e3077 61 Gene3D G3DSA:4.10.830.10 1 61 4.5E-27 T 10-11-2016 CJM129_RS09030 0860721238fa0485c23bb154273e3077 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 10-11-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 CJM129_RS00515 d6f9db74287b78b2b36f49b5946f18a9 278 Gene3D G3DSA:3.90.1530.10 29 127 3.7E-36 T 10-11-2016 CJM129_RS00515 d6f9db74287b78b2b36f49b5946f18a9 278 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 29 205 1.4E-55 T 10-11-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CJM129_RS00515 d6f9db74287b78b2b36f49b5946f18a9 278 SMART SM00470 32 121 1.1E-32 T 10-11-2016 IPR003115 ParB/Sulfiredoxin CJM129_RS00515 d6f9db74287b78b2b36f49b5946f18a9 278 SUPERFAMILY SSF110849 33 167 4.34E-32 T 10-11-2016 IPR003115 ParB/Sulfiredoxin CJM129_RS00515 d6f9db74287b78b2b36f49b5946f18a9 278 Pfam PF02195 ParB-like nuclease domain 32 121 5.5E-25 T 10-11-2016 IPR003115 ParB/Sulfiredoxin CJM129_RS00515 d6f9db74287b78b2b36f49b5946f18a9 278 PANTHER PTHR33375 2 259 1.9E-69 T 10-11-2016 CJM129_RS03230 43e651c82bba8fa91d45746c1f2e6385 135 SUPERFAMILY SSF52540 19 102 6.07E-12 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03230 43e651c82bba8fa91d45746c1f2e6385 135 Gene3D G3DSA:3.40.50.300 15 133 1.5E-29 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03230 43e651c82bba8fa91d45746c1f2e6385 135 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 134 5.4E-29 T 10-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CJM129_RS03230 43e651c82bba8fa91d45746c1f2e6385 135 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 18 129 1.8E-23 T 10-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CJM129_RS08170 5d21b8d8f528c8cb8a0a07f12ee758f7 228 PANTHER PTHR30183 1 227 2.5E-69 T 10-11-2016 CJM129_RS08170 5d21b8d8f528c8cb8a0a07f12ee758f7 228 SUPERFAMILY SSF161098 11 225 2.22E-27 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS08170 5d21b8d8f528c8cb8a0a07f12ee758f7 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 222 5.1E-10 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS08170 5d21b8d8f528c8cb8a0a07f12ee758f7 228 Gene3D G3DSA:1.10.3720.10 16 227 4.8E-23 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS08170 5d21b8d8f528c8cb8a0a07f12ee758f7 228 PANTHER PTHR30183:SF4 1 227 2.5E-69 T 10-11-2016 CJM129_RS00375 c3ac15191c4bf9bd32b426198caf0673 98 Gene3D G3DSA:1.20.120.50 8 86 2.4E-22 T 10-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CJM129_RS00375 c3ac15191c4bf9bd32b426198caf0673 98 ProSitePatterns PS00550 Hemerythrin family signature. 62 85 - T 10-11-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 CJM129_RS00375 c3ac15191c4bf9bd32b426198caf0673 98 Pfam PF01814 Hemerythrin HHE cation binding domain 19 79 5.8E-6 T 10-11-2016 IPR012312 Haemerythrin-like CJM129_RS00375 c3ac15191c4bf9bd32b426198caf0673 98 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 9 86 1.8E-20 T 10-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CJM129_RS00375 c3ac15191c4bf9bd32b426198caf0673 98 PANTHER PTHR37164 6 87 2.3E-14 T 10-11-2016 CJM129_RS00375 c3ac15191c4bf9bd32b426198caf0673 98 SUPERFAMILY SSF47188 8 86 1.44E-20 T 10-11-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 CJM129_RS08305 7a0f28221416667c0d836d775d8f5323 98 PANTHER PTHR11434 1 93 3.6E-32 T 10-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CJM129_RS08305 7a0f28221416667c0d836d775d8f5323 98 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 94 9.3E-24 T 10-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CJM129_RS08305 7a0f28221416667c0d836d775d8f5323 98 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 98 16.294 T 10-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CJM129_RS01250 c2b5815aaf165c89f179300fea22cb47 75 SUPERFAMILY SSF46785 11 67 1.19E-5 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS01250 c2b5815aaf165c89f179300fea22cb47 75 Pfam PF05732 Firmicute plasmid replication protein (RepL) 9 72 5.4E-7 T 10-11-2016 IPR008813 Plasmid replication protein, RepL GO:0006260|GO:0006276 CJM129_RS01250 c2b5815aaf165c89f179300fea22cb47 75 Gene3D G3DSA:1.10.10.10 14 73 9.2E-10 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS09465 5b3a533655d339b42750aab0b6594947 185 SUPERFAMILY SSF56235 1 184 7.33E-63 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS09465 5b3a533655d339b42750aab0b6594947 185 PANTHER PTHR11686:SF9 1 185 5.1E-74 T 10-11-2016 CJM129_RS09465 5b3a533655d339b42750aab0b6594947 185 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 154 172 4.1E-23 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS09465 5b3a533655d339b42750aab0b6594947 185 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 30 49 4.1E-23 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS09465 5b3a533655d339b42750aab0b6594947 185 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 130 148 4.1E-23 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS09465 5b3a533655d339b42750aab0b6594947 185 PANTHER PTHR11686 1 185 5.1E-74 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS09465 5b3a533655d339b42750aab0b6594947 185 Pfam PF01019 Gamma-glutamyltranspeptidase 1 184 2.1E-63 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS09465 5b3a533655d339b42750aab0b6594947 185 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 130 154 - T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00530 ba39428b1cb7032da858e07e69477c04 173 PANTHER PTHR11910 4 137 1.5E-12 T 10-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CJM129_RS00530 ba39428b1cb7032da858e07e69477c04 173 SUPERFAMILY SSF47928 3 99 4.32E-19 T 10-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CJM129_RS00530 ba39428b1cb7032da858e07e69477c04 173 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 5 140 4.1E-18 T 10-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CJM129_RS00530 ba39428b1cb7032da858e07e69477c04 173 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 139 3.7E-22 T 10-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CJM129_RS00530 ba39428b1cb7032da858e07e69477c04 173 Gene3D G3DSA:1.10.520.20 4 98 8.0E-18 T 10-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CJM129_RS00530 ba39428b1cb7032da858e07e69477c04 173 PRINTS PR00125 ATP synthase delta subunit signature 68 79 1.4E-6 T 10-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CJM129_RS00530 ba39428b1cb7032da858e07e69477c04 173 PRINTS PR00125 ATP synthase delta subunit signature 5 24 1.4E-6 T 10-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CJM129_RS00530 ba39428b1cb7032da858e07e69477c04 173 PRINTS PR00125 ATP synthase delta subunit signature 79 93 1.4E-6 T 10-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CJM129_RS00530 ba39428b1cb7032da858e07e69477c04 173 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 171 12.072 T 10-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 CJM129_RS00675 1502eed26e416cb978d77f65f75b4ec9 133 SUPERFAMILY SSF53067 2 79 2.52E-12 T 10-11-2016 CJM129_RS00675 1502eed26e416cb978d77f65f75b4ec9 133 Gene3D G3DSA:3.30.420.40 3 89 3.0E-7 T 10-11-2016 CJM129_RS03430 efc1f95f61a8cc52b82a21f90b9b7b7f 75 Gene3D G3DSA:3.30.1320.10 1 74 2.5E-29 T 10-11-2016 IPR023803 Ribosomal protein S16 domain CJM129_RS03430 efc1f95f61a8cc52b82a21f90b9b7b7f 75 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 10-11-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03430 efc1f95f61a8cc52b82a21f90b9b7b7f 75 Pfam PF00886 Ribosomal protein S16 8 66 4.9E-24 T 10-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03430 efc1f95f61a8cc52b82a21f90b9b7b7f 75 PANTHER PTHR12919 1 72 6.5E-33 T 10-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03430 efc1f95f61a8cc52b82a21f90b9b7b7f 75 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 74 1.1E-27 T 10-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03430 efc1f95f61a8cc52b82a21f90b9b7b7f 75 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 75 21.092 T 10-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS03430 efc1f95f61a8cc52b82a21f90b9b7b7f 75 SUPERFAMILY SSF54565 1 73 1.18E-28 T 10-11-2016 IPR023803 Ribosomal protein S16 domain CJM129_RS09025 d58615077731dfad71dc20d4efe65f76 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 10-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09025 d58615077731dfad71dc20d4efe65f76 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 27.626 T 10-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09025 d58615077731dfad71dc20d4efe65f76 131 SUPERFAMILY SSF56047 1 131 8.5E-42 T 10-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09025 d58615077731dfad71dc20d4efe65f76 131 PANTHER PTHR11758 1 131 1.1E-41 T 10-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09025 d58615077731dfad71dc20d4efe65f76 131 Gene3D G3DSA:3.30.1490.10 74 131 1.7E-24 T 10-11-2016 CJM129_RS09025 d58615077731dfad71dc20d4efe65f76 131 Pfam PF00410 Ribosomal protein S8 4 131 5.9E-45 T 10-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09025 d58615077731dfad71dc20d4efe65f76 131 Gene3D G3DSA:3.30.1370.30 1 71 8.8E-22 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PANTHER PTHR33841 289 486 3.2E-69 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PANTHER PTHR33841 502 552 3.2E-69 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 Pfam PF07669 Eco57I restriction-modification methylase 805 910 1.0E-15 T 10-11-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 838 862 2.4E-15 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 459 475 2.4E-15 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 805 817 2.4E-15 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 519 533 2.4E-15 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 Gene3D G3DSA:3.40.50.150 461 478 3.7E-54 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 Gene3D G3DSA:3.40.50.150 515 539 3.7E-54 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 Gene3D G3DSA:3.40.50.150 598 655 3.7E-54 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 Gene3D G3DSA:3.40.50.150 797 939 3.7E-54 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 Pfam PF12950 TaqI-like C-terminal specificity domain 1032 1173 1.5E-8 T 10-11-2016 IPR025931 TaqI-like C-terminal specificity domain CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PANTHER PTHR33841 572 1232 3.2E-69 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 808 814 - T 10-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 SUPERFAMILY SSF53335 798 941 9.3E-53 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 SUPERFAMILY SSF53335 590 657 9.3E-53 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 SUPERFAMILY SSF53335 515 543 9.3E-53 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 SUPERFAMILY SSF53335 299 478 9.3E-53 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PANTHER PTHR33841:SF1 289 486 3.2E-69 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PANTHER PTHR33841:SF1 502 552 3.2E-69 T 10-11-2016 CJM129_RS00175 831facfca15b67ee24ad4ba4d5e1e5b2 1234 PANTHER PTHR33841:SF1 572 1232 3.2E-69 T 10-11-2016 CJM129_RS01740 241f86d28f8ab3ab19e6716dd8926d69 492 PANTHER PTHR30203:SF15 1 487 2.4E-84 T 10-11-2016 CJM129_RS01740 241f86d28f8ab3ab19e6716dd8926d69 492 Gene3D G3DSA:1.20.1600.10 56 471 1.2E-101 T 10-11-2016 CJM129_RS01740 241f86d28f8ab3ab19e6716dd8926d69 492 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 468 1.7E-87 T 10-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CJM129_RS01740 241f86d28f8ab3ab19e6716dd8926d69 492 SUPERFAMILY SSF56954 3 470 2.88E-101 T 10-11-2016 CJM129_RS01740 241f86d28f8ab3ab19e6716dd8926d69 492 PANTHER PTHR30203 1 487 2.4E-84 T 10-11-2016 CJM129_RS01740 241f86d28f8ab3ab19e6716dd8926d69 492 Pfam PF02321 Outer membrane efflux protein 288 458 8.1E-20 T 10-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJM129_RS01740 241f86d28f8ab3ab19e6716dd8926d69 492 Pfam PF02321 Outer membrane efflux protein 65 255 3.2E-29 T 10-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 Gene3D G3DSA:3.30.70.20 188 242 3.2E-6 T 10-11-2016 CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 PANTHER PTHR24960 22 360 1.9E-32 T 10-11-2016 CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 PANTHER PTHR24960:SF45 22 360 1.9E-32 T 10-11-2016 CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 Gene3D G3DSA:3.30.70.20 243 273 3.1E-5 T 10-11-2016 CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 SUPERFAMILY SSF54862 152 315 1.81E-23 T 10-11-2016 CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 SUPERFAMILY SSF54862 72 94 1.81E-23 T 10-11-2016 CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 Pfam PF13746 4Fe-4S dicluster domain 185 288 1.0E-39 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 Gene3D G3DSA:2.60.40.10 321 446 5.9E-9 T 10-11-2016 IPR013783 Immunoglobulin-like fold CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 319 446 1.1E-22 T 10-11-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 Pfam PF12801 4Fe-4S binding domain 61 105 3.5E-12 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 8 446 1.2E-157 T 10-11-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 CJM129_RS01760 e56c2742864b7718dcb5fecabbc4105e 458 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 237 248 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS02235 551e0b4875b83ad66b6433ada5d3c5fe 395 Gene3D G3DSA:1.20.1250.20 10 194 1.4E-14 T 10-11-2016 CJM129_RS02235 551e0b4875b83ad66b6433ada5d3c5fe 395 Gene3D G3DSA:1.20.1250.20 218 387 5.5E-6 T 10-11-2016 CJM129_RS02235 551e0b4875b83ad66b6433ada5d3c5fe 395 SUPERFAMILY SSF103473 8 392 1.29E-30 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS02235 551e0b4875b83ad66b6433ada5d3c5fe 395 Pfam PF07690 Major Facilitator Superfamily 18 355 3.5E-15 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS02235 551e0b4875b83ad66b6433ada5d3c5fe 395 PANTHER PTHR23513 1 395 1.9E-34 T 10-11-2016 CJM129_RS01460 5e82a06dc4ad0b78812df7b46a61ea86 201 PANTHER PTHR21343:SF0 3 196 7.3E-24 T 10-11-2016 CJM129_RS01460 5e82a06dc4ad0b78812df7b46a61ea86 201 Gene3D G3DSA:3.40.50.300 3 171 2.6E-35 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01460 5e82a06dc4ad0b78812df7b46a61ea86 201 PIRSF PIRSF006755 1 198 2.0E-26 T 10-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CJM129_RS01460 5e82a06dc4ad0b78812df7b46a61ea86 201 SUPERFAMILY SSF52540 3 170 2.26E-26 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01460 5e82a06dc4ad0b78812df7b46a61ea86 201 PANTHER PTHR21343 3 196 7.3E-24 T 10-11-2016 CJM129_RS01460 5e82a06dc4ad0b78812df7b46a61ea86 201 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 176 18.378 T 10-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 CJM129_RS01460 5e82a06dc4ad0b78812df7b46a61ea86 201 Pfam PF13500 AAA domain 2 172 4.4E-28 T 10-11-2016 CJM129_RS06080 1c417169b4006c6c9b75c7ee3e1ae994 258 PANTHER PTHR34390 1 251 3.5E-36 T 10-11-2016 CJM129_RS06080 1c417169b4006c6c9b75c7ee3e1ae994 258 Pfam PF06738 Putative threonine/serine exporter 13 251 1.3E-51 T 10-11-2016 IPR010619 Putative threonine/serine exporter CJM129_RS06080 1c417169b4006c6c9b75c7ee3e1ae994 258 PANTHER PTHR34390:SF2 1 251 3.5E-36 T 10-11-2016 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.535 T 10-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 PANTHER PTHR12220 1 140 1.6E-74 T 10-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 10-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.3E-36 T 10-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.3E-36 T 10-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.3E-36 T 10-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.3E-36 T 10-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 SUPERFAMILY SSF54686 1 137 1.13E-57 T 10-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 3.4E-49 T 10-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 Gene3D G3DSA:3.90.1170.10 23 139 1.1E-53 T 10-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09060 cbbbddbeeedb8c4fcb55100a111c0a02 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 3.2E-58 T 10-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 CJM129_RS06130 b73a6dc4e625c551ea6a76e2e38b750a 79 Pfam PF02416 mttA/Hcf106 family 6 56 3.8E-20 T 10-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CJM129_RS06130 b73a6dc4e625c551ea6a76e2e38b750a 79 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 6 49 7.2E-22 T 10-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CJM129_RS06130 b73a6dc4e625c551ea6a76e2e38b750a 79 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 78 19.96 T 10-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CJM129_RS06130 b73a6dc4e625c551ea6a76e2e38b750a 79 PANTHER PTHR33162 1 59 6.8E-15 T 10-11-2016 CJM129_RS02485 49b31e8497b306bc9037055083831782 103 PANTHER PTHR28259 1 103 3.6E-26 T 10-11-2016 CJM129_RS02485 49b31e8497b306bc9037055083831782 103 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 1 103 16.348 T 10-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CJM129_RS02485 49b31e8497b306bc9037055083831782 103 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 10 98 1.0E-19 T 10-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CJM129_RS04420 4e337692b80f839367b4f573db3022cc 703 Pfam PF02554 Carbon starvation protein CstA 32 409 5.4E-163 T 10-11-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CJM129_RS04420 4e337692b80f839367b4f573db3022cc 703 PANTHER PTHR30252:SF3 5 598 0.0 T 10-11-2016 CJM129_RS04420 4e337692b80f839367b4f573db3022cc 703 PANTHER PTHR30252:SF3 619 699 0.0 T 10-11-2016 CJM129_RS04420 4e337692b80f839367b4f573db3022cc 703 PANTHER PTHR30252 5 598 0.0 T 10-11-2016 CJM129_RS04420 4e337692b80f839367b4f573db3022cc 703 PANTHER PTHR30252 619 699 0.0 T 10-11-2016 CJM129_RS04420 4e337692b80f839367b4f573db3022cc 703 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 464 590 7.3E-34 T 10-11-2016 IPR025299 CstA, C-terminal domain CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 Gene3D G3DSA:1.20.1250.20 188 379 3.3E-30 T 10-11-2016 CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 Gene3D G3DSA:1.20.1250.20 4 187 9.0E-36 T 10-11-2016 CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 PANTHER PTHR23504:SF37 5 410 4.8E-87 T 10-11-2016 CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 Pfam PF07690 Major Facilitator Superfamily 206 379 1.3E-17 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 Pfam PF07690 Major Facilitator Superfamily 10 189 9.1E-35 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 PANTHER PTHR23504 5 410 4.8E-87 T 10-11-2016 CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 SUPERFAMILY SSF103473 5 377 5.75E-67 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 PRINTS PR01035 Tetracycline resistance protein signature 14 30 9.7E-5 T 10-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 PRINTS PR01035 Tetracycline resistance protein signature 265 286 9.7E-5 T 10-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 PRINTS PR01035 Tetracycline resistance protein signature 128 150 9.7E-5 T 10-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJM129_RS07385 1d09df81f8b09ba61d059f35b3c63972 433 PRINTS PR01035 Tetracycline resistance protein signature 98 119 9.7E-5 T 10-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJM129_RS03190 1a1a5392012b0c0cb108beb3846e6df2 182 Gene3D G3DSA:3.30.70.60 108 168 1.9E-6 T 10-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CJM129_RS08320 bb5f72dbd428c2503e659b0b4979b360 332 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 7 332 21.686 T 10-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CJM129_RS08320 bb5f72dbd428c2503e659b0b4979b360 332 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 53 68 - T 10-11-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 CJM129_RS08320 bb5f72dbd428c2503e659b0b4979b360 332 PANTHER PTHR11432 8 332 1.9E-109 T 10-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CJM129_RS08320 bb5f72dbd428c2503e659b0b4979b360 332 Pfam PF00146 NADH dehydrogenase 14 327 1.5E-98 T 10-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 CJM129_RS08320 bb5f72dbd428c2503e659b0b4979b360 332 PANTHER PTHR11432:SF3 8 332 1.9E-109 T 10-11-2016 CJM129_RS07225 3a1cc65366f6b012846a0aac45d4cd5d 241 PANTHER PTHR13773 5 237 6.3E-47 T 10-11-2016 CJM129_RS07225 3a1cc65366f6b012846a0aac45d4cd5d 241 Pfam PF01148 Cytidylyltransferase family 5 240 1.4E-48 T 10-11-2016 CJM129_RS07225 3a1cc65366f6b012846a0aac45d4cd5d 241 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 202 228 - T 10-11-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 CJM129_RS07215 3fb3aafb11f70f966c3df27b852e61c5 402 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 336 398 6.2E-9 T 10-11-2016 IPR033397 Metallo-carboxypeptidase, C-terminal domain CJM129_RS07215 3fb3aafb11f70f966c3df27b852e61c5 402 Gene3D G3DSA:3.40.630.10 31 245 4.3E-11 T 10-11-2016 CJM129_RS07215 3fb3aafb11f70f966c3df27b852e61c5 402 SUPERFAMILY SSF53187 288 320 6.28E-25 T 10-11-2016 CJM129_RS07215 3fb3aafb11f70f966c3df27b852e61c5 402 SUPERFAMILY SSF53187 28 163 6.28E-25 T 10-11-2016 CJM129_RS07215 3fb3aafb11f70f966c3df27b852e61c5 402 SUPERFAMILY SSF53187 197 247 6.28E-25 T 10-11-2016 CJM129_RS07215 3fb3aafb11f70f966c3df27b852e61c5 402 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 14 265 9.2E-88 T 10-11-2016 IPR031489 D,L-carboxypeptidase, peptidase domain CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 SUPERFAMILY SSF82714 172 248 4.71E-11 T 10-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 Gene3D G3DSA:3.30.2090.10 171 248 1.6E-10 T 10-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 Gene3D G3DSA:3.30.2090.10 685 765 8.3E-8 T 10-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.6E-51 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.6E-51 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.6E-51 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PRINTS PR00702 Acriflavin resistance protein family signature 370 394 1.6E-51 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PRINTS PR00702 Acriflavin resistance protein family signature 315 338 1.6E-51 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PRINTS PR00702 Acriflavin resistance protein family signature 523 540 1.6E-51 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PRINTS PR00702 Acriflavin resistance protein family signature 422 445 1.6E-51 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PRINTS PR00702 Acriflavin resistance protein family signature 589 603 1.6E-51 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PRINTS PR00702 Acriflavin resistance protein family signature 342 363 1.6E-51 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 PANTHER PTHR32063 1 1005 1.2E-263 T 10-11-2016 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 SUPERFAMILY SSF82714 685 767 7.98E-9 T 10-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 SUPERFAMILY SSF82866 276 473 8.76E-35 T 10-11-2016 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 SUPERFAMILY SSF82866 770 990 2.09E-43 T 10-11-2016 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 Gene3D G3DSA:1.20.1640.10 272 480 2.7E-44 T 10-11-2016 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 SUPERFAMILY SSF82693 53 116 2.09E-11 T 10-11-2016 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 Gene3D G3DSA:1.10.3850.10 774 990 6.0E-54 T 10-11-2016 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 SUPERFAMILY SSF82693 536 620 7.85E-6 T 10-11-2016 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 Gene3D G3DSA:3.30.70.1430 43 128 7.4E-13 T 10-11-2016 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 Pfam PF00873 AcrB/AcrD/AcrF family 1 986 4.2E-228 T 10-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 SUPERFAMILY SSF82693 253 309 3.92E-12 T 10-11-2016 CJM129_RS05430 8e21f2677e756cf96d3fca204c122d89 1005 SUPERFAMILY SSF82693 139 171 3.92E-12 T 10-11-2016 CJM129_RS05435 c3307a3015e658ea65266c1d0534ee9b 268 SUPERFAMILY SSF46565 201 261 3.93E-13 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS05435 c3307a3015e658ea65266c1d0534ee9b 268 Pfam PF00226 DnaJ domain 203 261 5.5E-9 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS05435 c3307a3015e658ea65266c1d0534ee9b 268 SMART SM00271 202 265 4.8E-7 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS05435 c3307a3015e658ea65266c1d0534ee9b 268 Gene3D G3DSA:1.10.287.110 201 262 2.4E-13 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS01245 85289ce3a9f341123693c8abac6a0dc0 118 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 66 77 - T 10-11-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 CJM129_RS01245 85289ce3a9f341123693c8abac6a0dc0 118 PANTHER PTHR34299:SF1 7 114 7.8E-29 T 10-11-2016 CJM129_RS01245 85289ce3a9f341123693c8abac6a0dc0 118 PANTHER PTHR34299 7 114 7.8E-29 T 10-11-2016 CJM129_RS01245 85289ce3a9f341123693c8abac6a0dc0 118 Gene3D G3DSA:1.10.3830.10 4 115 9.2E-39 T 10-11-2016 CJM129_RS01245 85289ce3a9f341123693c8abac6a0dc0 118 Pfam PF01219 Prokaryotic diacylglycerol kinase 12 113 8.5E-33 T 10-11-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 CJM129_RS04780 56112b09ce4d71a09a3c92ecd6dee848 372 Pfam PF16668 Adhesin from Campylobacter 20 371 5.3E-234 T 10-11-2016 IPR032077 Adhesin JlpA, Campylobacter GO:0007155 CJM129_RS03905 85e5ceaee01cd30d24afc6a44baee6e9 416 PANTHER PTHR11851:SF136 1 413 5.7E-94 T 10-11-2016 CJM129_RS03905 85e5ceaee01cd30d24afc6a44baee6e9 416 Gene3D G3DSA:3.30.830.10 234 408 1.7E-27 T 10-11-2016 IPR011237 Peptidase M16 domain GO:0046872 CJM129_RS03905 85e5ceaee01cd30d24afc6a44baee6e9 416 Pfam PF05193 Peptidase M16 inactive domain 169 346 1.9E-30 T 10-11-2016 IPR007863 Peptidase M16, C-terminal CJM129_RS03905 85e5ceaee01cd30d24afc6a44baee6e9 416 Pfam PF00675 Insulinase (Peptidase family M16) 20 131 1.7E-24 T 10-11-2016 IPR011765 Peptidase M16, N-terminal CJM129_RS03905 85e5ceaee01cd30d24afc6a44baee6e9 416 PANTHER PTHR11851 1 413 5.7E-94 T 10-11-2016 CJM129_RS03905 85e5ceaee01cd30d24afc6a44baee6e9 416 SUPERFAMILY SSF63411 225 410 7.33E-36 T 10-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJM129_RS03905 85e5ceaee01cd30d24afc6a44baee6e9 416 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 10-11-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CJM129_RS03905 85e5ceaee01cd30d24afc6a44baee6e9 416 Gene3D G3DSA:3.30.830.10 4 220 7.0E-55 T 10-11-2016 IPR011237 Peptidase M16 domain GO:0046872 CJM129_RS03905 85e5ceaee01cd30d24afc6a44baee6e9 416 SUPERFAMILY SSF63411 3 209 3.17E-56 T 10-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJM129_RS07940 2929abeed35c2662bbaeafc8f4c60a7e 219 PANTHER PTHR42208:SF1 1 218 7.0E-19 T 10-11-2016 CJM129_RS07940 2929abeed35c2662bbaeafc8f4c60a7e 219 PANTHER PTHR42208 1 218 7.0E-19 T 10-11-2016 CJM129_RS07940 2929abeed35c2662bbaeafc8f4c60a7e 219 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 208 1.1E-44 T 10-11-2016 CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 Gene3D G3DSA:1.20.1560.10 4 300 1.0E-21 T 10-11-2016 CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 4 523 6.3E-102 T 10-11-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 SUPERFAMILY SSF52540 315 525 8.53E-43 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 Pfam PF00664 ABC transporter transmembrane region 42 276 3.9E-12 T 10-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 SMART SM00382 345 522 7.6E-13 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 Pfam PF00005 ABC transporter 336 473 7.1E-29 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 Gene3D G3DSA:3.40.50.300 319 526 9.4E-40 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 PANTHER PTHR24220:SF425 322 525 2.5E-81 T 10-11-2016 CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 PANTHER PTHR24220 322 525 2.5E-81 T 10-11-2016 CJM129_RS08395 9e554b68ee938c1df9affd6038418e0c 543 SUPERFAMILY SSF90123 4 300 1.7E-25 T 10-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJM129_RS01225 9cb695be9eb5dbf4d7da6bf04bc5e9c4 87 ProDom PD061650 JHP0447 HP0495 CJ0253 13 87 7.0E-37 T 10-11-2016 CJM129_RS01225 9cb695be9eb5dbf4d7da6bf04bc5e9c4 87 Gene3D G3DSA:3.30.70.1460 8 82 1.1E-7 T 10-11-2016 IPR027471 YbeD-like domain CJM129_RS01225 9cb695be9eb5dbf4d7da6bf04bc5e9c4 87 SUPERFAMILY SSF117991 5 81 8.63E-20 T 10-11-2016 IPR027471 YbeD-like domain CJM129_RS01225 9cb695be9eb5dbf4d7da6bf04bc5e9c4 87 Pfam PF04359 Protein of unknown function (DUF493) 11 83 3.3E-9 T 10-11-2016 IPR007454 Uncharacterised protein family UPF0250 CJM129_RS06220 a058b689d4859c5f07fdd8ba854abbd5 508 PANTHER PTHR11101 24 282 4.3E-133 T 10-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 CJM129_RS06220 a058b689d4859c5f07fdd8ba854abbd5 508 PANTHER PTHR11101 334 499 4.3E-133 T 10-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 CJM129_RS06220 a058b689d4859c5f07fdd8ba854abbd5 508 Pfam PF01384 Phosphate transporter family 49 495 6.9E-113 T 10-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 CJM129_RS06220 a058b689d4859c5f07fdd8ba854abbd5 508 PANTHER PTHR11101:SF51 334 499 4.3E-133 T 10-11-2016 CJM129_RS06220 a058b689d4859c5f07fdd8ba854abbd5 508 PANTHER PTHR11101:SF51 24 282 4.3E-133 T 10-11-2016 CJM129_RS04895 4c64e517ce67d6c825a6f34c4f0cc2d8 523 Gene3D G3DSA:3.30.70.100 392 486 4.4E-5 T 10-11-2016 CJM129_RS04895 4c64e517ce67d6c825a6f34c4f0cc2d8 523 SUPERFAMILY SSF82689 390 501 2.48E-7 T 10-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CJM129_RS04895 4c64e517ce67d6c825a6f34c4f0cc2d8 523 Gene3D G3DSA:2.30.30.60 317 380 7.2E-6 T 10-11-2016 CJM129_RS04895 4c64e517ce67d6c825a6f34c4f0cc2d8 523 Pfam PF00924 Mechanosensitive ion channel 258 486 4.3E-31 T 10-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CJM129_RS04895 4c64e517ce67d6c825a6f34c4f0cc2d8 523 SUPERFAMILY SSF50182 301 381 1.63E-6 T 10-11-2016 IPR010920 LSM domain CJM129_RS04895 4c64e517ce67d6c825a6f34c4f0cc2d8 523 PANTHER PTHR30566:SF14 4 413 1.9E-14 T 10-11-2016 CJM129_RS04895 4c64e517ce67d6c825a6f34c4f0cc2d8 523 PANTHER PTHR30566 4 413 1.9E-14 T 10-11-2016 CJM129_RS03130 5a3cf0138906deef176371ac8c6b79c2 162 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 152 2.5E-74 T 10-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CJM129_RS03130 5a3cf0138906deef176371ac8c6b79c2 162 SUPERFAMILY SSF56784 2 147 7.63E-30 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS03130 5a3cf0138906deef176371ac8c6b79c2 162 Gene3D G3DSA:3.40.50.1000 2 151 6.1E-32 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS03130 5a3cf0138906deef176371ac8c6b79c2 162 PIRSF PIRSF006118 1 162 3.9E-59 T 10-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 CJM129_RS03130 5a3cf0138906deef176371ac8c6b79c2 162 Pfam PF08282 haloacid dehalogenase-like hydrolase 77 123 1.3E-6 T 10-11-2016 IPR023214 HAD-like domain CJM129_RS03130 5a3cf0138906deef176371ac8c6b79c2 162 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 115 2.4E-13 T 10-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CJM129_RS03130 5a3cf0138906deef176371ac8c6b79c2 162 PANTHER PTHR21485 4 147 6.0E-32 T 10-11-2016 CJM129_RS00895 b5a807587eeb294e4e66312199f2e303 283 SUPERFAMILY SSF159501 31 279 5.75E-54 T 10-11-2016 CJM129_RS00895 b5a807587eeb294e4e66312199f2e303 283 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 53 249 4.6E-33 T 10-11-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN CJM129_RS00895 b5a807587eeb294e4e66312199f2e303 283 PIRSF PIRSF020419 1 283 9.6E-121 T 10-11-2016 IPR016773 Ferric uptake regulator, CjrA, predicted CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 SUPERFAMILY SSF53067 4 114 6.66E-20 T 10-11-2016 CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 Pfam PF02541 Ppx/GppA phosphatase family 34 159 7.1E-19 T 10-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 Pfam PF02541 Ppx/GppA phosphatase family 208 320 2.0E-4 T 10-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 Gene3D G3DSA:3.30.420.40 4 114 2.9E-20 T 10-11-2016 CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 Gene3D G3DSA:3.30.420.150 122 172 7.6E-33 T 10-11-2016 CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 Gene3D G3DSA:3.30.420.150 210 322 7.6E-33 T 10-11-2016 CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 PANTHER PTHR30005 4 157 3.0E-29 T 10-11-2016 CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 PANTHER PTHR30005 178 314 3.0E-29 T 10-11-2016 CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 SUPERFAMILY SSF53067 222 321 1.24E-17 T 10-11-2016 CJM129_RS06440 c3255d5fcc49e7d57847c5c5600b4ae9 324 SUPERFAMILY SSF53067 123 186 1.24E-17 T 10-11-2016 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 Gene3D G3DSA:3.30.360.10 138 287 1.9E-54 T 10-11-2016 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 172 194 - T 10-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 Pfam PF00742 Homoserine dehydrogenase 126 304 1.5E-60 T 10-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 SUPERFAMILY SSF55021 331 402 1.58E-12 T 10-11-2016 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 PIRSF PIRSF000098 1 415 2.4E-154 T 10-11-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 Gene3D G3DSA:3.30.70.260 335 401 2.3E-10 T 10-11-2016 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 SUPERFAMILY SSF55347 126 291 1.31E-51 T 10-11-2016 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 SUPERFAMILY SSF51735 1 147 7.71E-30 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 Pfam PF01842 ACT domain 336 402 4.9E-13 T 10-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 PANTHER PTHR21499:SF2 1 356 1.8E-110 T 10-11-2016 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 112 7.2E-10 T 10-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 Gene3D G3DSA:3.40.50.720 1 137 6.0E-35 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS00755 7c1051a7e01ce4821cf1ce2a463f6d4c 415 PANTHER PTHR21499 1 356 1.8E-110 T 10-11-2016 CJM129_RS04325 fbd1f0509e618796f10563c4edd06f1d 330 PANTHER PTHR11538 94 330 3.6E-95 T 10-11-2016 CJM129_RS04325 fbd1f0509e618796f10563c4edd06f1d 330 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 35 329 6.8E-99 T 10-11-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CJM129_RS04325 fbd1f0509e618796f10563c4edd06f1d 330 Gene3D G3DSA:3.30.930.10 3 330 2.7E-115 T 10-11-2016 CJM129_RS04325 fbd1f0509e618796f10563c4edd06f1d 330 Pfam PF01409 tRNA synthetases class II core domain (F) 85 329 2.4E-96 T 10-11-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CJM129_RS04325 fbd1f0509e618796f10563c4edd06f1d 330 SUPERFAMILY SSF55681 94 330 1.27E-71 T 10-11-2016 CJM129_RS04325 fbd1f0509e618796f10563c4edd06f1d 330 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 329 46.6 T 10-11-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CJM129_RS04325 fbd1f0509e618796f10563c4edd06f1d 330 SUPERFAMILY SSF46589 6 68 1.1E-12 T 10-11-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 CJM129_RS04325 fbd1f0509e618796f10563c4edd06f1d 330 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 12 80 8.5E-14 T 10-11-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CJM129_RS08770 bfe77d22c994a7d44882d39ba0d4434f 696 PANTHER PTHR31632 420 682 4.8E-68 T 10-11-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CJM129_RS08770 bfe77d22c994a7d44882d39ba0d4434f 696 PANTHER PTHR31632:SF4 420 682 4.8E-68 T 10-11-2016 CJM129_RS08770 bfe77d22c994a7d44882d39ba0d4434f 696 Pfam PF03239 Iron permease FTR1 family 355 553 4.2E-20 T 10-11-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 50 67 - T 10-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 Gene3D G3DSA:2.40.100.10 9 148 4.9E-46 T 10-11-2016 IPR029000 Cyclophilin-like domain CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 SUPERFAMILY SSF50891 16 151 7.89E-45 T 10-11-2016 IPR029000 Cyclophilin-like domain CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 149 3.0E-38 T 10-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 55 67 9.3E-24 T 10-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 29 44 9.3E-24 T 10-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 138 9.3E-24 T 10-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 95 110 9.3E-24 T 10-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 122 9.3E-24 T 10-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 PIRSF PIRSF001467 3 159 9.5E-40 T 10-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CJM129_RS06105 ea4d2b675e504c270e28d5f8feb57305 160 PANTHER PTHR11071 15 145 1.2E-41 T 10-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 CJM129_RS02915 ee5678a9db61a22036ab05cc69d237e6 222 Gene3D G3DSA:2.40.33.20 1 212 2.0E-61 T 10-11-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like CJM129_RS02915 ee5678a9db61a22036ab05cc69d237e6 222 PANTHER PTHR30212 1 210 2.6E-31 T 10-11-2016 CJM129_RS02915 ee5678a9db61a22036ab05cc69d237e6 222 SUPERFAMILY SSF50800 1 220 1.31E-61 T 10-11-2016 IPR011037 Pyruvate kinase-like, insert domain CJM129_RS02915 ee5678a9db61a22036ab05cc69d237e6 222 Pfam PF03473 MOSC domain 45 153 4.0E-12 T 10-11-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CJM129_RS02915 ee5678a9db61a22036ab05cc69d237e6 222 PANTHER PTHR30212:SF2 1 210 2.6E-31 T 10-11-2016 CJM129_RS07325 8be4fead06cf02972cba29bbf1169e75 347 Pfam PF01594 Domain of unknown function DUF20 7 338 1.0E-37 T 10-11-2016 IPR002549 Transmembrane protein TqsA-like CJM129_RS07325 8be4fead06cf02972cba29bbf1169e75 347 PANTHER PTHR21716 5 346 2.0E-34 T 10-11-2016 IPR002549 Transmembrane protein TqsA-like CJM129_RS07325 8be4fead06cf02972cba29bbf1169e75 347 PANTHER PTHR21716:SF13 5 346 2.0E-34 T 10-11-2016 CJM129_RS00565 92f993c70d8d15f2a14e1ca06c89d7e9 259 SUPERFAMILY SSF74653 148 249 4.9E-10 T 10-11-2016 CJM129_RS00565 92f993c70d8d15f2a14e1ca06c89d7e9 259 Gene3D G3DSA:3.30.1150.10 150 241 3.4E-5 T 10-11-2016 CJM129_RS00565 92f993c70d8d15f2a14e1ca06c89d7e9 259 Pfam PF13103 TonB C terminal 167 250 1.1E-12 T 10-11-2016 IPR006260 TonB, C-terminal GO:0006810 CJM129_RS07505 530152aa8211f226904bcc6794ac0f49 181 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 56 2.6E-10 T 10-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJM129_RS07505 530152aa8211f226904bcc6794ac0f49 181 Gene3D G3DSA:3.40.50.620 1 177 2.0E-47 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS07505 530152aa8211f226904bcc6794ac0f49 181 PANTHER PTHR39321 1 131 3.1E-26 T 10-11-2016 CJM129_RS07505 530152aa8211f226904bcc6794ac0f49 181 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 175 1.1E-44 T 10-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CJM129_RS07505 530152aa8211f226904bcc6794ac0f49 181 SUPERFAMILY SSF52374 1 176 7.11E-38 T 10-11-2016 CJM129_RS07505 530152aa8211f226904bcc6794ac0f49 181 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 178 22.606 T 10-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 CJM129_RS07505 530152aa8211f226904bcc6794ac0f49 181 Pfam PF01467 Cytidylyltransferase-like 5 155 1.0E-20 T 10-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJM129_RS03730 158165cf85d390268e77481ad4cb557b 258 Gene3D G3DSA:3.40.190.10 21 150 5.2E-49 T 10-11-2016 CJM129_RS03730 158165cf85d390268e77481ad4cb557b 258 Pfam PF03180 NLPA lipoprotein 24 258 2.4E-79 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS03730 158165cf85d390268e77481ad4cb557b 258 PIRSF PIRSF002854 4 258 3.3E-84 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS03730 158165cf85d390268e77481ad4cb557b 258 SUPERFAMILY SSF53850 23 258 1.57E-73 T 10-11-2016 CJM129_RS03730 158165cf85d390268e77481ad4cb557b 258 PANTHER PTHR30429 1 258 1.1E-100 T 10-11-2016 IPR004872 Lipoprotein NlpA family CJM129_RS04380 14546ee55b3d69bb933cfce9a2637d67 139 PANTHER PTHR36302 1 132 9.5E-26 T 10-11-2016 CJM129_RS04380 14546ee55b3d69bb933cfce9a2637d67 139 PANTHER PTHR36302:SF1 1 132 9.5E-26 T 10-11-2016 CJM129_RS04380 14546ee55b3d69bb933cfce9a2637d67 139 Pfam PF04314 Protein of unknown function (DUF461) 23 130 1.5E-31 T 10-11-2016 IPR007410 DR1885-like metal-binding protein CJM129_RS04380 14546ee55b3d69bb933cfce9a2637d67 139 SUPERFAMILY SSF110087 4 131 2.35E-39 T 10-11-2016 IPR007410 DR1885-like metal-binding protein CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 PRINTS PR00173 Glutamate-aspartate symporter signature 12 32 9.5E-16 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 PRINTS PR00173 Glutamate-aspartate symporter signature 221 240 9.5E-16 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 PRINTS PR00173 Glutamate-aspartate symporter signature 186 205 9.5E-16 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 PRINTS PR00173 Glutamate-aspartate symporter signature 288 314 9.5E-16 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 PRINTS PR00173 Glutamate-aspartate symporter signature 323 342 9.5E-16 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 PANTHER PTHR11958 6 396 1.2E-158 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 PANTHER PTHR11958:SF68 6 396 1.2E-158 T 10-11-2016 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 Pfam PF00375 Sodium:dicarboxylate symporter family 14 399 7.6E-70 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 2 405 33.664 T 10-11-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 Gene3D G3DSA:1.10.3860.10 6 401 6.6E-84 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS05750 eef3139597af423ab538f47f418905b4 407 SUPERFAMILY SSF118215 14 400 2.35E-91 T 10-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 10-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 Pfam PF00164 Ribosomal protein S12/S23 3 123 7.2E-42 T 10-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.9E-58 T 10-11-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.9E-58 T 10-11-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.9E-58 T 10-11-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.9E-58 T 10-11-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.9E-58 T 10-11-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.9E-58 T 10-11-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 10-11-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 124 3.1E-69 T 10-11-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 PANTHER PTHR11652 2 116 1.4E-68 T 10-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 PIRSF PIRSF002133 1 124 1.9E-53 T 10-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 SUPERFAMILY SSF50249 2 123 1.29E-50 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS02355 f5d2699a054d550686ab32d0385a2b98 128 Gene3D G3DSA:2.40.50.140 2 123 7.8E-64 T 10-11-2016 IPR012340 Nucleic acid-binding, OB-fold CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 27 42 - T 10-11-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 SMART SM01403 5 99 8.2E-50 T 10-11-2016 IPR027486 Ribosomal protein S10 domain CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 100 25.968 T 10-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 6.3E-19 T 10-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 PRINTS PR00971 Ribosomal protein S10 family signature 3 16 6.3E-19 T 10-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 6.3E-19 T 10-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 2 99 4.5E-41 T 10-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 SUPERFAMILY SSF54999 3 98 2.49E-36 T 10-11-2016 IPR027486 Ribosomal protein S10 domain CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 PANTHER PTHR11700 1 98 2.0E-44 T 10-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 Gene3D G3DSA:3.30.70.600 2 99 5.7E-41 T 10-11-2016 IPR027486 Ribosomal protein S10 domain CJM129_RS09100 502ea63878bbac3a8884cfbefb7275d4 103 Pfam PF00338 Ribosomal protein S10p/S20e 5 98 7.8E-35 T 10-11-2016 IPR027486 Ribosomal protein S10 domain CJM129_RS00560 a698c7efea3ce8e07081e456a933cf07 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 5 129 3.0E-28 T 10-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CJM129_RS00560 a698c7efea3ce8e07081e456a933cf07 129 PANTHER PTHR30558 4 129 3.1E-26 T 10-11-2016 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 Pfam PF00696 Amino acid kinase family 2 226 5.5E-37 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 Gene3D G3DSA:3.40.1160.10 1 250 4.6E-40 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 Hamap MF_00456 Glutamate 5-kinase [proB]. 2 251 30.66 T 10-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 SUPERFAMILY SSF53633 2 250 8.9E-58 T 10-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 PANTHER PTHR11063 1 215 2.2E-52 T 10-11-2016 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 ProSitePatterns PS00902 Glutamate 5-kinase signature. 200 217 - T 10-11-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 PRINTS PR00474 Glutamate 5-kinase family signature 69 97 1.9E-41 T 10-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 PRINTS PR00474 Glutamate 5-kinase family signature 141 168 1.9E-41 T 10-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 PRINTS PR00474 Glutamate 5-kinase family signature 202 222 1.9E-41 T 10-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 PRINTS PR00474 Glutamate 5-kinase family signature 109 130 1.9E-41 T 10-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 PRINTS PR00474 Glutamate 5-kinase family signature 37 51 1.9E-41 T 10-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 TIGRFAM TIGR01027 proB: glutamate 5-kinase 2 246 1.1E-67 T 10-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 PIRSF PIRSF000729 1 251 8.4E-73 T 10-11-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 CJM129_RS00495 0fc47a5972ea3df238be910f7d6b9732 251 PANTHER PTHR11063:SF12 1 215 2.2E-52 T 10-11-2016 CJM129_RS05855 2f9f8c64a70d7ebcba48aca243e5ea41 130 SMART SM00448 1 116 6.5E-36 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS05855 2f9f8c64a70d7ebcba48aca243e5ea41 130 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-29 T 10-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 CJM129_RS05855 2f9f8c64a70d7ebcba48aca243e5ea41 130 SUPERFAMILY SSF52172 2 121 1.22E-34 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS05855 2f9f8c64a70d7ebcba48aca243e5ea41 130 PANTHER PTHR26402 1 120 2.4E-37 T 10-11-2016 CJM129_RS05855 2f9f8c64a70d7ebcba48aca243e5ea41 130 Gene3D G3DSA:3.40.50.2300 2 122 1.7E-36 T 10-11-2016 CJM129_RS08075 a5167d85084be092abfd8bc1aeb7ad46 143 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 7 106 13.108 T 10-11-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 CJM129_RS08075 a5167d85084be092abfd8bc1aeb7ad46 143 SUPERFAMILY SSF143430 6 88 1.11E-13 T 10-11-2016 CJM129_RS08075 a5167d85084be092abfd8bc1aeb7ad46 143 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 7 108 3.5E-30 T 10-11-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 CJM129_RS08075 a5167d85084be092abfd8bc1aeb7ad46 143 Pfam PF09827 CRISPR associated protein Cas2 7 86 1.3E-14 T 10-11-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 CJM129_RS06405 31e1a183262189a952438e5dba033335 124 Pfam PF13411 MerR HTH family regulatory protein 10 77 2.5E-16 T 10-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJM129_RS06405 31e1a183262189a952438e5dba033335 124 SUPERFAMILY SSF46955 10 104 2.52E-20 T 10-11-2016 IPR009061 Putative DNA-binding domain CJM129_RS06405 31e1a183262189a952438e5dba033335 124 PANTHER PTHR30204 2 103 1.6E-27 T 10-11-2016 CJM129_RS06405 31e1a183262189a952438e5dba033335 124 PANTHER PTHR30204:SF8 2 103 1.6E-27 T 10-11-2016 CJM129_RS06405 31e1a183262189a952438e5dba033335 124 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 10-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJM129_RS06405 31e1a183262189a952438e5dba033335 124 SMART SM00422 10 79 4.1E-27 T 10-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJM129_RS06405 31e1a183262189a952438e5dba033335 124 Gene3D G3DSA:1.10.1660.10 10 113 1.7E-23 T 10-11-2016 CJM129_RS07925 d6fe5c42ee47a2913bd72afa00fb1882 488 PANTHER PTHR10422 8 474 2.7E-170 T 10-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CJM129_RS07925 d6fe5c42ee47a2913bd72afa00fb1882 488 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 270 - T 10-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CJM129_RS07925 d6fe5c42ee47a2913bd72afa00fb1882 488 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 454 1.6E-105 T 10-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CJM129_RS07925 d6fe5c42ee47a2913bd72afa00fb1882 488 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 485 1.1E-217 T 10-11-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CJM129_RS07925 d6fe5c42ee47a2913bd72afa00fb1882 488 PANTHER PTHR10422:SF21 8 474 2.7E-170 T 10-11-2016 CJM129_RS07925 d6fe5c42ee47a2913bd72afa00fb1882 488 Gene3D G3DSA:1.20.210.10 12 485 1.7E-70 T 10-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CJM129_RS07925 d6fe5c42ee47a2913bd72afa00fb1882 488 SUPERFAMILY SSF81442 9 485 7.72E-114 T 10-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 CJM129_RS07605 db2115ab27eb40ffc711f59778f7e8aa 201 PANTHER PTHR30390 4 193 3.4E-82 T 10-11-2016 CJM129_RS07605 db2115ab27eb40ffc711f59778f7e8aa 201 SUPERFAMILY SSF53697 6 193 2.89E-51 T 10-11-2016 CJM129_RS07605 db2115ab27eb40ffc711f59778f7e8aa 201 Gene3D G3DSA:3.40.50.10490 5 194 2.5E-61 T 10-11-2016 CJM129_RS07605 db2115ab27eb40ffc711f59778f7e8aa 201 Pfam PF13580 SIS domain 28 149 1.8E-24 T 10-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 CJM129_RS07605 db2115ab27eb40ffc711f59778f7e8aa 201 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 3 192 37.932 T 10-11-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 CJM129_RS07605 db2115ab27eb40ffc711f59778f7e8aa 201 PANTHER PTHR30390:SF6 4 193 3.4E-82 T 10-11-2016 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 10-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 9 425 30.494 T 10-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 Gene3D G3DSA:3.65.10.10 21 231 7.8E-44 T 10-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 ProSitePatterns PS00104 EPSP synthase signature 1. 85 99 - T 10-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 PANTHER PTHR21090 16 428 4.3E-129 T 10-11-2016 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 PIRSF PIRSF000505 3 428 1.0E-98 T 10-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 PANTHER PTHR21090:SF5 16 428 4.3E-129 T 10-11-2016 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 SUPERFAMILY SSF55205 17 425 6.05E-105 T 10-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 419 6.8E-130 T 10-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 17 424 3.8E-116 T 10-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS04315 2403b3051d1592593e211ab4f11f022b 428 Gene3D G3DSA:3.65.10.10 232 424 4.2E-48 T 10-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 CJM129_RS06630 e0b6a5d99af7657ddc59538dbe56d0b8 268 Pfam PF02687 FtsX-like permease family 151 260 2.5E-7 T 10-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 509 582 8.0E-29 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 SUPERFAMILY SSF58104 437 649 5.49E-50 T 10-11-2016 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 SUPERFAMILY SSF58104 332 362 5.49E-50 T 10-11-2016 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 PANTHER PTHR32089:SF1 15 342 3.5E-59 T 10-11-2016 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 PANTHER PTHR32089:SF1 443 644 3.5E-59 T 10-11-2016 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 Gene3D G3DSA:1.10.287.950 451 647 2.5E-43 T 10-11-2016 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 PANTHER PTHR32089 15 342 3.5E-59 T 10-11-2016 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 PANTHER PTHR32089 443 644 3.5E-59 T 10-11-2016 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 SUPERFAMILY SSF103190 101 195 2.17E-9 T 10-11-2016 IPR029151 Periplasmic sensor domain-like CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 Pfam PF02743 Cache domain 37 258 3.5E-25 T 10-11-2016 IPR033479 Double Cache domain 1 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 Gene3D G3DSA:3.30.450.20 93 186 5.6E-17 T 10-11-2016 CJM129_RS08280 77d038cafb4a58ac65ae3a35084a11c2 651 SMART SM00283 459 650 3.3E-27 T 10-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 PIRSF PIRSF005962 1 396 2.3E-122 T 10-11-2016 IPR017439 Amidohydrolase GO:0016787 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 Pfam PF01546 Peptidase family M20/M25/M40 78 364 9.5E-38 T 10-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 PANTHER PTHR11014:SF63 6 395 1.1E-143 T 10-11-2016 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 PANTHER PTHR11014 6 395 1.1E-143 T 10-11-2016 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 SUPERFAMILY SSF55031 188 306 3.53E-27 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 Gene3D G3DSA:3.40.630.10 3 185 1.3E-90 T 10-11-2016 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 Gene3D G3DSA:3.40.630.10 305 395 1.3E-90 T 10-11-2016 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 380 3.3E-101 T 10-11-2016 IPR017439 Amidohydrolase GO:0016787 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 Pfam PF07687 Peptidase dimerisation domain 193 288 1.2E-6 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 SUPERFAMILY SSF53187 5 204 4.79E-76 T 10-11-2016 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 SUPERFAMILY SSF53187 305 394 4.79E-76 T 10-11-2016 CJM129_RS02930 fa78703eafac5c80e60b5bc46368078d 396 Gene3D G3DSA:3.30.70.360 188 304 1.4E-36 T 10-11-2016 IPR011650 Peptidase M20, dimerisation domain CJM129_RS06445 321719b41abeead52567026e812e5e8c 257 Gene3D G3DSA:3.20.20.70 1 256 2.4E-90 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS06445 321719b41abeead52567026e812e5e8c 257 PANTHER PTHR30456 186 257 2.5E-90 T 10-11-2016 CJM129_RS06445 321719b41abeead52567026e812e5e8c 257 PANTHER PTHR30456 1 162 2.5E-90 T 10-11-2016 CJM129_RS06445 321719b41abeead52567026e812e5e8c 257 PANTHER PTHR30456:SF0 186 257 2.5E-90 T 10-11-2016 CJM129_RS06445 321719b41abeead52567026e812e5e8c 257 PANTHER PTHR30456:SF0 1 162 2.5E-90 T 10-11-2016 CJM129_RS06445 321719b41abeead52567026e812e5e8c 257 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 257 2.2E-82 T 10-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CJM129_RS06445 321719b41abeead52567026e812e5e8c 257 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 257 89.618 T 10-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CJM129_RS06445 321719b41abeead52567026e812e5e8c 257 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 255 3.8E-85 T 10-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CJM129_RS06445 321719b41abeead52567026e812e5e8c 257 SUPERFAMILY SSF63892 2 256 3.79E-78 T 10-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 CJM129_RS00125 f48a67d862a0d3cb6261011bd11e5fce 207 PANTHER PTHR34934 33 199 4.0E-22 T 10-11-2016 CJM129_RS00125 f48a67d862a0d3cb6261011bd11e5fce 207 SUPERFAMILY SSF69796 2 203 3.27E-51 T 10-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CJM129_RS00125 f48a67d862a0d3cb6261011bd11e5fce 207 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 1 205 25.455 T 10-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CJM129_RS00125 f48a67d862a0d3cb6261011bd11e5fce 207 Pfam PF02511 Thymidylate synthase complementing protein 10 190 8.2E-45 T 10-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CJM129_RS00125 f48a67d862a0d3cb6261011bd11e5fce 207 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 12 199 8.6E-48 T 10-11-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 PANTHER PTHR23416:SF55 6 204 4.6E-77 T 10-11-2016 CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 Gene3D G3DSA:1.10.3130.10 5 66 1.1E-16 T 10-11-2016 CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 PANTHER PTHR23416 6 204 4.6E-77 T 10-11-2016 CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 Gene3D G3DSA:2.160.10.10 67 208 9.5E-34 T 10-11-2016 CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 SUPERFAMILY SSF51161 7 179 1.14E-48 T 10-11-2016 IPR011004 Trimeric LpxA-like CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 PIRSF PIRSF000441 1 209 1.5E-71 T 10-11-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 168 7.7E-75 T 10-11-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 129 157 - T 10-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 153 3.2E-8 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS03695 2c5f9df0d2bef36d1f309d1bb9f0cc60 212 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 74 110 0.0012 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS01240 ce5e05903c6748872d42af42588abb20 512 Pfam PF00884 Sulfatase 221 491 7.0E-38 T 10-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJM129_RS01240 ce5e05903c6748872d42af42588abb20 512 PANTHER PTHR30443 1 506 4.4E-154 T 10-11-2016 CJM129_RS01240 ce5e05903c6748872d42af42588abb20 512 Pfam PF08019 Domain of unknown function (DUF1705) 47 194 8.5E-38 T 10-11-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 CJM129_RS01240 ce5e05903c6748872d42af42588abb20 512 Gene3D G3DSA:3.40.720.10 285 494 1.8E-11 T 10-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJM129_RS01240 ce5e05903c6748872d42af42588abb20 512 SUPERFAMILY SSF53649 251 494 1.61E-16 T 10-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJM129_RS01240 ce5e05903c6748872d42af42588abb20 512 PANTHER PTHR30443:SF0 1 506 4.4E-154 T 10-11-2016 CJM129_RS04810 a4dbb12907ca1666e555df846b1fc1c1 252 ProDom PD315620 CJ0990C 2 249 7.0E-138 T 10-11-2016 IPR020525 Uncharacterised protein family Cj0990c CJM129_RS04875 53ff64c1de17404e1e99d00428c1d798 172 SUPERFAMILY SSF144091 2 167 4.84E-32 T 10-11-2016 CJM129_RS04875 53ff64c1de17404e1e99d00428c1d798 172 PANTHER PTHR22936 1 166 1.6E-19 T 10-11-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 CJM129_RS04875 53ff64c1de17404e1e99d00428c1d798 172 Pfam PF01694 Rhomboid family 33 167 2.0E-23 T 10-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CJM129_RS04875 53ff64c1de17404e1e99d00428c1d798 172 Gene3D G3DSA:1.20.1540.10 3 167 5.3E-26 T 10-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CJM129_RS02520 3b4c4fd6bddada39f09b4e2a146209d6 164 Pfam PF00460 Flagella basal body rod protein 10 34 2.0E-9 T 10-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJM129_RS02520 3b4c4fd6bddada39f09b4e2a146209d6 164 PANTHER PTHR30435:SF2 90 163 1.0E-51 T 10-11-2016 CJM129_RS02520 3b4c4fd6bddada39f09b4e2a146209d6 164 PANTHER PTHR30435:SF2 1 67 1.0E-51 T 10-11-2016 CJM129_RS02520 3b4c4fd6bddada39f09b4e2a146209d6 164 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 10-11-2016 IPR019776 Flagellar basal body rod protein, conserved site CJM129_RS02520 3b4c4fd6bddada39f09b4e2a146209d6 164 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 163 4.9E-60 T 10-11-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CJM129_RS02520 3b4c4fd6bddada39f09b4e2a146209d6 164 PANTHER PTHR30435 90 163 1.0E-51 T 10-11-2016 CJM129_RS02520 3b4c4fd6bddada39f09b4e2a146209d6 164 PANTHER PTHR30435 1 67 1.0E-51 T 10-11-2016 CJM129_RS02520 3b4c4fd6bddada39f09b4e2a146209d6 164 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 113 161 1.0E-12 T 10-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJM129_RS07590 c930daf7b8e3064e9f3daaf779100096 592 Pfam PF11186 Protein of unknown function (DUF2972) 398 588 2.9E-25 T 10-11-2016 IPR021353 Protein of unknown function DUF2972 CJM129_RS00390 839899c0f0e6bc89aa5d2263a1c67020 245 Pfam PF02754 Cysteine-rich domain 132 217 2.5E-16 T 10-11-2016 IPR004017 Cysteine-rich domain CJM129_RS00390 839899c0f0e6bc89aa5d2263a1c67020 245 Pfam PF02754 Cysteine-rich domain 4 84 8.7E-12 T 10-11-2016 IPR004017 Cysteine-rich domain CJM129_RS00390 839899c0f0e6bc89aa5d2263a1c67020 245 PANTHER PTHR30296:SF0 3 245 1.5E-71 T 10-11-2016 CJM129_RS00390 839899c0f0e6bc89aa5d2263a1c67020 245 PANTHER PTHR30296 3 245 1.5E-71 T 10-11-2016 CJM129_RS00395 032849c1d69a95a301be8b03acdec311 560 PANTHER PTHR30003:SF0 5 556 1.4E-245 T 10-11-2016 CJM129_RS00395 032849c1d69a95a301be8b03acdec311 560 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 9 548 3.4E-209 T 10-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CJM129_RS00395 032849c1d69a95a301be8b03acdec311 560 Pfam PF02652 L-lactate permease 19 545 1.3E-205 T 10-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CJM129_RS00395 032849c1d69a95a301be8b03acdec311 560 PANTHER PTHR30003 5 556 1.4E-245 T 10-11-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CJM129_RS02630 5ddf4da1fec07a28f73e644058fb318e 128 SUPERFAMILY SSF101116 6 123 5.89E-34 T 10-11-2016 IPR003713 Flagellar protein FliS GO:0044780 CJM129_RS02630 5ddf4da1fec07a28f73e644058fb318e 128 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 124 4.5E-40 T 10-11-2016 IPR003713 Flagellar protein FliS GO:0044780 CJM129_RS02630 5ddf4da1fec07a28f73e644058fb318e 128 Pfam PF02561 Flagellar protein FliS 7 120 1.0E-32 T 10-11-2016 IPR003713 Flagellar protein FliS GO:0044780 CJM129_RS02630 5ddf4da1fec07a28f73e644058fb318e 128 PIRSF PIRSF039090 1 128 2.3E-28 T 10-11-2016 IPR003713 Flagellar protein FliS GO:0044780 CJM129_RS02630 5ddf4da1fec07a28f73e644058fb318e 128 PANTHER PTHR34773 7 124 5.5E-23 T 10-11-2016 CJM129_RS02630 5ddf4da1fec07a28f73e644058fb318e 128 Gene3D G3DSA:1.20.120.340 6 124 2.6E-33 T 10-11-2016 IPR003713 Flagellar protein FliS GO:0044780 CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 Gene3D G3DSA:1.25.40.10 22 226 1.6E-39 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 PANTHER PTHR11102:SF88 33 226 8.1E-26 T 10-11-2016 CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 Pfam PF08238 Sel1 repeat 185 216 0.0056 T 10-11-2016 IPR006597 Sel1-like repeat CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 Pfam PF08238 Sel1 repeat 48 82 5.4E-4 T 10-11-2016 IPR006597 Sel1-like repeat CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 Pfam PF08238 Sel1 repeat 148 182 6.6E-5 T 10-11-2016 IPR006597 Sel1-like repeat CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 PANTHER PTHR11102 33 226 8.1E-26 T 10-11-2016 CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 SMART SM00671 148 183 1.5E-6 T 10-11-2016 IPR006597 Sel1-like repeat CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 SMART SM00671 116 147 1.1 T 10-11-2016 IPR006597 Sel1-like repeat CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 SMART SM00671 48 83 2.5E-8 T 10-11-2016 IPR006597 Sel1-like repeat CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 SMART SM00671 184 216 0.024 T 10-11-2016 IPR006597 Sel1-like repeat CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 SMART SM00671 84 115 31.0 T 10-11-2016 IPR006597 Sel1-like repeat CJM129_RS01980 873ca9aa49be4d86174d2fc375557096 234 SUPERFAMILY SSF81901 22 223 1.22E-36 T 10-11-2016 CJM129_RS07075 9f73063b98844068b64645f3b6264ec3 378 SUPERFAMILY SSF52402 15 165 6.05E-14 T 10-11-2016 CJM129_RS07075 9f73063b98844068b64645f3b6264ec3 378 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 1 345 1.1E-131 T 10-11-2016 IPR020022 N-acetyl sugar amidotransferase CJM129_RS07075 9f73063b98844068b64645f3b6264ec3 378 Gene3D G3DSA:3.40.50.620 58 129 8.7E-4 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 Gene3D G3DSA:1.20.58.100 459 565 5.3E-30 T 10-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 Gene3D G3DSA:3.90.700.10 274 382 4.8E-37 T 10-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 PANTHER PTHR11632 46 610 1.4E-195 T 10-11-2016 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 Pfam PF02910 Fumarate reductase flavoprotein C-term 485 606 2.3E-31 T 10-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 Gene3D G3DSA:3.50.50.60 383 448 2.2E-81 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 Gene3D G3DSA:3.50.50.60 38 273 2.2E-81 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 Gene3D G3DSA:4.10.80.40 566 602 1.2E-13 T 10-11-2016 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 SUPERFAMILY SSF51905 390 450 3.82E-54 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 SUPERFAMILY SSF51905 44 291 3.82E-54 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 SUPERFAMILY SSF56425 268 386 8.52E-40 T 10-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 46 608 1.0E-187 T 10-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 PIRSF PIRSF000171 35 607 9.9E-33 T 10-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 24 4.7E-4 T 10-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 Pfam PF00890 FAD binding domain 46 428 2.8E-81 T 10-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 PANTHER PTHR11632:SF5 46 610 1.4E-195 T 10-11-2016 CJM129_RS02125 ead78c2c304e1600551b818671dd1492 611 SUPERFAMILY SSF46977 477 602 1.57E-37 T 10-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 CJM129_RS00180 9712dccb5cddefc4807b8b8923013f88 506 Pfam PF13576 Pentapeptide repeats (9 copies) 192 238 6.5E-8 T 10-11-2016 IPR001646 Pentapeptide repeat CJM129_RS07095 35a44eaf01fd4160e8be74f6b593459d 384 PIRSF PIRSF000390 13 383 7.7E-85 T 10-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJM129_RS07095 35a44eaf01fd4160e8be74f6b593459d 384 PANTHER PTHR30244 9 382 1.5E-100 T 10-11-2016 CJM129_RS07095 35a44eaf01fd4160e8be74f6b593459d 384 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 18 376 2.0E-157 T 10-11-2016 IPR026385 Aminotransferase, LLPSF_NHT_00031 family CJM129_RS07095 35a44eaf01fd4160e8be74f6b593459d 384 SUPERFAMILY SSF53383 17 377 7.66E-93 T 10-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase CJM129_RS07095 35a44eaf01fd4160e8be74f6b593459d 384 Gene3D G3DSA:3.90.1150.10 275 381 1.6E-22 T 10-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 CJM129_RS07095 35a44eaf01fd4160e8be74f6b593459d 384 PANTHER PTHR30244:SF16 9 382 1.5E-100 T 10-11-2016 CJM129_RS07095 35a44eaf01fd4160e8be74f6b593459d 384 Gene3D G3DSA:3.40.640.10 18 273 2.3E-79 T 10-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJM129_RS07095 35a44eaf01fd4160e8be74f6b593459d 384 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 28 382 2.9E-82 T 10-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJM129_RS03900 843e84adcf1229f60a2deabe52c2f629 352 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 86 105 - T 10-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 CJM129_RS03900 843e84adcf1229f60a2deabe52c2f629 352 Pfam PF01180 Dihydroorotate dehydrogenase 51 335 2.9E-72 T 10-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CJM129_RS03900 843e84adcf1229f60a2deabe52c2f629 352 PIRSF PIRSF000164 17 352 1.7E-102 T 10-11-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 CJM129_RS03900 843e84adcf1229f60a2deabe52c2f629 352 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 287 307 - T 10-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 CJM129_RS03900 843e84adcf1229f60a2deabe52c2f629 352 Gene3D G3DSA:3.20.20.70 1 351 1.4E-107 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS03900 843e84adcf1229f60a2deabe52c2f629 352 PANTHER PTHR11938 47 352 3.2E-60 T 10-11-2016 CJM129_RS03900 843e84adcf1229f60a2deabe52c2f629 352 SUPERFAMILY SSF51395 1 350 1.01E-87 T 10-11-2016 CJM129_RS03900 843e84adcf1229f60a2deabe52c2f629 352 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 350 2.1E-115 T 10-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 SMART SM00846 3 150 5.9E-78 T 10-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 SUPERFAMILY SSF51735 3 166 1.84E-57 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 PANTHER PTHR10836:SF50 1 331 3.0E-169 T 10-11-2016 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 PIRSF PIRSF000149 1 332 2.7E-135 T 10-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 311 3.6E-61 T 10-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 4.4E-55 T 10-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 PANTHER PTHR10836 1 331 3.0E-169 T 10-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 SUPERFAMILY SSF55347 150 312 1.43E-63 T 10-11-2016 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 Gene3D G3DSA:3.40.50.720 1 158 3.3E-68 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 2.4E-128 T 10-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 Gene3D G3DSA:3.30.360.10 159 313 1.2E-70 T 10-11-2016 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 10-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.1E-31 T 10-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 227 244 1.1E-31 T 10-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.1E-31 T 10-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-31 T 10-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS07500 30a5315d22cb6fe7ee50e57414bcee3f 332 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 1.1E-31 T 10-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 4 31 2.1E-41 T 10-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 82 100 2.1E-41 T 10-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 100 126 2.1E-41 T 10-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 152 180 2.1E-41 T 10-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 PANTHER PTHR30371 8 245 8.2E-76 T 10-11-2016 CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 219 1.6E-65 T 10-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 6 224 2.8E-63 T 10-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 ProSitePatterns PS01218 TatC family signature. 152 171 - T 10-11-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 242 18.249 T 10-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJM129_RS02795 4359c8959a109b58c53590f53c359712 245 PANTHER PTHR30371:SF0 8 245 8.2E-76 T 10-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJM129_RS01730 24f7e0c7f107b373ea90a28b178594d4 448 PANTHER PTHR13932:SF5 15 414 1.6E-71 T 10-11-2016 CJM129_RS01730 24f7e0c7f107b373ea90a28b178594d4 448 SMART SM00729 42 253 1.1E-28 T 10-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJM129_RS01730 24f7e0c7f107b373ea90a28b178594d4 448 Pfam PF04055 Radical SAM superfamily 48 209 2.4E-13 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS01730 24f7e0c7f107b373ea90a28b178594d4 448 PANTHER PTHR13932 15 414 1.6E-71 T 10-11-2016 CJM129_RS01730 24f7e0c7f107b373ea90a28b178594d4 448 Gene3D G3DSA:3.80.30.20 43 233 6.0E-25 T 10-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe CJM129_RS01730 24f7e0c7f107b373ea90a28b178594d4 448 SUPERFAMILY SSF102114 20 404 5.49E-62 T 10-11-2016 CJM129_RS01395 aff528be4d42beb6d549bf6706915ae1 258 Gene3D G3DSA:3.40.1210.10 3 254 1.1E-82 T 10-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CJM129_RS01395 aff528be4d42beb6d549bf6706915ae1 258 Pfam PF01975 Survival protein SurE 4 191 1.6E-57 T 10-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CJM129_RS01395 aff528be4d42beb6d549bf6706915ae1 258 PANTHER PTHR30457 4 253 4.1E-80 T 10-11-2016 CJM129_RS01395 aff528be4d42beb6d549bf6706915ae1 258 SUPERFAMILY SSF64167 4 254 6.54E-76 T 10-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CJM129_RS01395 aff528be4d42beb6d549bf6706915ae1 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 241 3.0E-70 T 10-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CJM129_RS01395 aff528be4d42beb6d549bf6706915ae1 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 258 37.528 T 10-11-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 CJM129_RS05490 c44194733ce021fdbc5b54592896cd7e 258 Pfam PF05690 Thiazole biosynthesis protein ThiG 11 251 1.8E-100 T 10-11-2016 CJM129_RS05490 c44194733ce021fdbc5b54592896cd7e 258 PANTHER PTHR34266 4 256 5.2E-123 T 10-11-2016 CJM129_RS05490 c44194733ce021fdbc5b54592896cd7e 258 Gene3D G3DSA:3.20.20.70 10 256 5.8E-47 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS05490 c44194733ce021fdbc5b54592896cd7e 258 Hamap MF_00443 Thiazole synthase [thiG]. 9 257 38.26 T 10-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 CJM129_RS05490 c44194733ce021fdbc5b54592896cd7e 258 SUPERFAMILY SSF110399 8 242 1.11E-71 T 10-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 CJM129_RS02470 6facb9a517d5339bd4911c904fab7f18 215 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 215 39.277 T 10-11-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS02470 6facb9a517d5339bd4911c904fab7f18 215 SMART SM01211 1 213 2.4E-110 T 10-11-2016 CJM129_RS02470 6facb9a517d5339bd4911c904fab7f18 215 Gene3D G3DSA:3.40.50.880 1 214 1.1E-38 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS02470 6facb9a517d5339bd4911c904fab7f18 215 PIRSF PIRSF001586 1 215 2.2E-80 T 10-11-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS02470 6facb9a517d5339bd4911c904fab7f18 215 PANTHER PTHR10099 1 215 2.6E-97 T 10-11-2016 CJM129_RS02470 6facb9a517d5339bd4911c904fab7f18 215 SUPERFAMILY SSF52317 1 214 1.95E-67 T 10-11-2016 IPR029062 Class I glutamine amidotransferase-like CJM129_RS02470 6facb9a517d5339bd4911c904fab7f18 215 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 203 4.4E-41 T 10-11-2016 CJM129_RS02470 6facb9a517d5339bd4911c904fab7f18 215 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 214 1.1E-94 T 10-11-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 CJM129_RS01910 7ec65384b6edb25faab51d3fa416ae84 187 Pfam PF02674 Colicin V production protein 6 152 1.0E-28 T 10-11-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CJM129_RS06430 e9d63ab27ef1529da046065d07742b28 273 SUPERFAMILY SSF51261 66 264 3.09E-54 T 10-11-2016 IPR011055 Duplicated hybrid motif CJM129_RS06430 e9d63ab27ef1529da046065d07742b28 273 Gene3D G3DSA:2.70.70.10 117 266 8.0E-47 T 10-11-2016 CJM129_RS06430 e9d63ab27ef1529da046065d07742b28 273 Pfam PF01551 Peptidase family M23 167 261 8.1E-31 T 10-11-2016 IPR016047 Peptidase M23 CJM129_RS06430 e9d63ab27ef1529da046065d07742b28 273 PANTHER PTHR21666 99 265 1.2E-40 T 10-11-2016 CJM129_RS05075 d3ba7a781c8ae7fd7d131412f2d080fa 257 Pfam PF09850 Type VI secretion system protein DotU 27 234 5.0E-35 T 10-11-2016 IPR017732 Type IV / VI secretion system, DotU CJM129_RS05075 d3ba7a781c8ae7fd7d131412f2d080fa 257 PANTHER PTHR38033 25 248 5.1E-19 T 10-11-2016 CJM129_RS05075 d3ba7a781c8ae7fd7d131412f2d080fa 257 PANTHER PTHR38033:SF1 25 248 5.1E-19 T 10-11-2016 CJM129_RS05075 d3ba7a781c8ae7fd7d131412f2d080fa 257 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 25 231 6.1E-35 T 10-11-2016 IPR017732 Type IV / VI secretion system, DotU CJM129_RS08510 8881d881b5cc2ef8e6f10e5989582fd4 166 PIRSF PIRSF006162 1 154 2.5E-42 T 10-11-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 CJM129_RS08510 8881d881b5cc2ef8e6f10e5989582fd4 166 Pfam PF04608 Phosphatidylglycerophosphatase A 3 146 3.6E-42 T 10-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CJM129_RS08510 8881d881b5cc2ef8e6f10e5989582fd4 166 PANTHER PTHR36305 3 152 2.0E-32 T 10-11-2016 CJM129_RS08510 8881d881b5cc2ef8e6f10e5989582fd4 166 Gene3D G3DSA:1.10.3760.10 66 144 1.1E-7 T 10-11-2016 IPR027416 YutG-like domain CJM129_RS08510 8881d881b5cc2ef8e6f10e5989582fd4 166 SUPERFAMILY SSF101307 3 147 1.23E-35 T 10-11-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 PANTHER PTHR11815 1 382 2.0E-199 T 10-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 Gene3D G3DSA:3.40.50.261 241 385 2.6E-60 T 10-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 Pfam PF08442 ATP-grasp domain 2 202 1.3E-72 T 10-11-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 Pfam PF00549 CoA-ligase 262 374 3.3E-23 T 10-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 387 41.521 T 10-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 SUPERFAMILY SSF52210 240 380 3.27E-49 T 10-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 PANTHER PTHR11815:SF1 1 382 2.0E-199 T 10-11-2016 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 Gene3D G3DSA:3.30.1490.20 21 95 3.2E-33 T 10-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 10-11-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 PIRSF PIRSF001554 1 387 1.8E-146 T 10-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 Gene3D G3DSA:3.30.470.20 96 238 2.0E-54 T 10-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 382 5.8E-150 T 10-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 CJM129_RS02550 11d99deb146533019a0ee5938f3973cd 387 SUPERFAMILY SSF56059 1 238 7.86E-75 T 10-11-2016 CJM129_RS03365 94aabbf6175367c78fb85b7852e9cd50 270 Pfam PF00460 Flagella basal body rod protein 6 35 3.8E-9 T 10-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJM129_RS03365 94aabbf6175367c78fb85b7852e9cd50 270 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 141 1.7E-31 T 10-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJM129_RS03365 94aabbf6175367c78fb85b7852e9cd50 270 SUPERFAMILY SSF117143 96 222 6.02E-17 T 10-11-2016 CJM129_RS03365 94aabbf6175367c78fb85b7852e9cd50 270 PANTHER PTHR30435 1 265 5.5E-46 T 10-11-2016 CJM129_RS03365 94aabbf6175367c78fb85b7852e9cd50 270 PANTHER PTHR30435:SF16 1 265 5.5E-46 T 10-11-2016 CJM129_RS03365 94aabbf6175367c78fb85b7852e9cd50 270 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 10-11-2016 IPR019776 Flagellar basal body rod protein, conserved site CJM129_RS03365 94aabbf6175367c78fb85b7852e9cd50 270 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 192 264 4.5E-13 T 10-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJM129_RS00935 2f8b2dd0f617b11d77a56677e1cade36 69 PANTHER PTHR30305 1 69 1.5E-20 T 10-11-2016 CJM129_RS00935 2f8b2dd0f617b11d77a56677e1cade36 69 PANTHER PTHR30305:SF3 1 69 1.5E-20 T 10-11-2016 CJM129_RS00935 2f8b2dd0f617b11d77a56677e1cade36 69 Pfam PF03831 PhnA domain 3 69 2.2E-28 T 10-11-2016 IPR013988 PhnA protein, C-terminal CJM129_RS00935 2f8b2dd0f617b11d77a56677e1cade36 69 SUPERFAMILY SSF82057 2 69 9.61E-24 T 10-11-2016 CJM129_RS00935 2f8b2dd0f617b11d77a56677e1cade36 69 Gene3D G3DSA:2.30.30.40 2 69 1.8E-29 T 10-11-2016 CJM129_RS08645 6a02e305ae471d7ad061e30c3bab0e15 327 SUPERFAMILY SSF52402 1 232 1.85E-28 T 10-11-2016 CJM129_RS08645 6a02e305ae471d7ad061e30c3bab0e15 327 PANTHER PTHR11933 1 244 1.1E-93 T 10-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 CJM129_RS08645 6a02e305ae471d7ad061e30c3bab0e15 327 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 2 144 1.5E-8 T 10-11-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 CJM129_RS08645 6a02e305ae471d7ad061e30c3bab0e15 327 Gene3D G3DSA:3.40.50.620 1 192 2.4E-33 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS08645 6a02e305ae471d7ad061e30c3bab0e15 327 PANTHER PTHR11933:SF6 1 244 1.1E-93 T 10-11-2016 CJM129_RS07130 5bf66cf54c380dd1b31da5ac9548ae4c 384 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 4 366 2.7E-140 T 10-11-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 CJM129_RS07130 5bf66cf54c380dd1b31da5ac9548ae4c 384 Gene3D G3DSA:3.40.50.2000 208 365 7.0E-10 T 10-11-2016 CJM129_RS07130 5bf66cf54c380dd1b31da5ac9548ae4c 384 SUPERFAMILY SSF53756 3 379 2.3E-85 T 10-11-2016 CJM129_RS07130 5bf66cf54c380dd1b31da5ac9548ae4c 384 Gene3D G3DSA:3.40.50.2000 2 207 1.9E-46 T 10-11-2016 CJM129_RS07130 5bf66cf54c380dd1b31da5ac9548ae4c 384 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 366 9.5E-82 T 10-11-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CJM129_RS00260 2db76a5a0d99f4764dbb795abf7bc954 114 PANTHER PTHR10283:SF13 1 88 3.7E-25 T 10-11-2016 IPR030676 Citrate carrier CitT-related CJM129_RS00260 2db76a5a0d99f4764dbb795abf7bc954 114 PANTHER PTHR10283 1 88 3.7E-25 T 10-11-2016 CJM129_RS00260 2db76a5a0d99f4764dbb795abf7bc954 114 Pfam PF00939 Sodium:sulfate symporter transmembrane region 1 88 2.4E-25 T 10-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 102 122 1.7E-57 T 10-11-2016 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 304 316 1.7E-57 T 10-11-2016 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 406 425 1.7E-57 T 10-11-2016 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 74 99 1.7E-57 T 10-11-2016 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 214 235 1.7E-57 T 10-11-2016 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 149 170 1.7E-57 T 10-11-2016 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 236 262 1.7E-57 T 10-11-2016 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 254 276 1.9E-5 T 10-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 405 427 1.9E-5 T 10-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 80 100 1.9E-5 T 10-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 112 5.2E-17 T 10-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PANTHER PTHR22773 1 554 3.0E-200 T 10-11-2016 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 593 4.9E-219 T 10-11-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 PANTHER PTHR22773:SF50 1 554 3.0E-200 T 10-11-2016 CJM129_RS08300 a211a282033a9d1cbfc97bb215fb0ab9 596 Pfam PF00361 Proton-conducting membrane transporter 125 413 5.1E-80 T 10-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CJM129_RS05365 a645c5922d0910ed1716400f40efd350 144 SUPERFAMILY SSF46626 4 116 8.61E-14 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS05365 a645c5922d0910ed1716400f40efd350 144 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 37 114 3.6E-7 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS05365 a645c5922d0910ed1716400f40efd350 144 Gene3D G3DSA:1.10.760.10 32 115 1.1E-10 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS09005 224eda19ad8ae37fcb891ca3ddbcc0c1 130 PANTHER PTHR12934 2 119 3.9E-31 T 10-11-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CJM129_RS09005 224eda19ad8ae37fcb891ca3ddbcc0c1 130 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 25 121 1.2E-17 T 10-11-2016 IPR021131 Ribosomal protein L18e/L15P CJM129_RS09005 224eda19ad8ae37fcb891ca3ddbcc0c1 130 Gene3D G3DSA:3.100.10.10 29 90 6.1E-12 T 10-11-2016 CJM129_RS09005 224eda19ad8ae37fcb891ca3ddbcc0c1 130 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 1 115 12.961 T 10-11-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CJM129_RS09005 224eda19ad8ae37fcb891ca3ddbcc0c1 130 SUPERFAMILY SSF52080 2 126 3.4E-29 T 10-11-2016 IPR021131 Ribosomal protein L18e/L15P CJM129_RS09005 224eda19ad8ae37fcb891ca3ddbcc0c1 130 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 126 1.0E-37 T 10-11-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 CJM129_RS03235 b182a0a49d9acc4205b6c03da1749687 242 SMART SM00382 28 212 4.1E-10 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS03235 b182a0a49d9acc4205b6c03da1749687 242 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 240 6.2E-102 T 10-11-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CJM129_RS03235 b182a0a49d9acc4205b6c03da1749687 242 Pfam PF00005 ABC transporter 20 165 1.2E-33 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS03235 b182a0a49d9acc4205b6c03da1749687 242 Gene3D G3DSA:3.40.50.300 3 231 5.3E-69 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03235 b182a0a49d9acc4205b6c03da1749687 242 SUPERFAMILY SSF52540 4 235 7.02E-66 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03235 b182a0a49d9acc4205b6c03da1749687 242 PANTHER PTHR24220:SF497 5 237 1.4E-121 T 10-11-2016 CJM129_RS03235 b182a0a49d9acc4205b6c03da1749687 242 PANTHER PTHR24220 5 237 1.4E-121 T 10-11-2016 CJM129_RS05335 1fc3c96a3556225678a67b14c706bf1c 231 PANTHER PTHR24220:SF568 3 230 4.5E-106 T 10-11-2016 CJM129_RS05335 1fc3c96a3556225678a67b14c706bf1c 231 Gene3D G3DSA:3.40.50.300 1 224 1.7E-52 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05335 1fc3c96a3556225678a67b14c706bf1c 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS05335 1fc3c96a3556225678a67b14c706bf1c 231 SUPERFAMILY SSF52540 2 229 2.01E-50 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS05335 1fc3c96a3556225678a67b14c706bf1c 231 Pfam PF00005 ABC transporter 18 159 1.4E-24 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS05335 1fc3c96a3556225678a67b14c706bf1c 231 SMART SM00382 26 215 8.3E-5 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS05335 1fc3c96a3556225678a67b14c706bf1c 231 PANTHER PTHR24220 3 230 4.5E-106 T 10-11-2016 CJM129_RS04900 744d4130a8d675e6b17a72db20cc0aa3 351 Gene3D G3DSA:1.20.1090.10 162 348 5.2E-58 T 10-11-2016 CJM129_RS04900 744d4130a8d675e6b17a72db20cc0aa3 351 PANTHER PTHR21090 1 351 5.0E-134 T 10-11-2016 CJM129_RS04900 744d4130a8d675e6b17a72db20cc0aa3 351 Gene3D G3DSA:3.40.50.1970 4 161 1.3E-54 T 10-11-2016 CJM129_RS04900 744d4130a8d675e6b17a72db20cc0aa3 351 Pfam PF01761 3-dehydroquinate synthase 57 316 1.8E-99 T 10-11-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CJM129_RS04900 744d4130a8d675e6b17a72db20cc0aa3 351 SUPERFAMILY SSF56796 5 348 1.44E-97 T 10-11-2016 CJM129_RS04900 744d4130a8d675e6b17a72db20cc0aa3 351 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 4 345 3.5E-118 T 10-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CJM129_RS04900 744d4130a8d675e6b17a72db20cc0aa3 351 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 349 37.908 T 10-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CJM129_RS04900 744d4130a8d675e6b17a72db20cc0aa3 351 PIRSF PIRSF001455 1 351 2.5E-101 T 10-11-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 CJM129_RS08290 4038389211b360bd98a5737c331a8810 462 PANTHER PTHR22773 6 461 7.7E-79 T 10-11-2016 CJM129_RS08290 4038389211b360bd98a5737c331a8810 462 PANTHER PTHR22773:SF41 6 461 7.7E-79 T 10-11-2016 CJM129_RS08290 4038389211b360bd98a5737c331a8810 462 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 11 461 13.967 T 10-11-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CJM129_RS08290 4038389211b360bd98a5737c331a8810 462 Pfam PF00361 Proton-conducting membrane transporter 125 413 1.7E-52 T 10-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 CJM129_RS07490 930dc6d9fae653705a0d01974d6e2e61 223 Pfam PF00121 Triosephosphate isomerase 2 221 1.8E-53 T 10-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CJM129_RS07490 930dc6d9fae653705a0d01974d6e2e61 223 SUPERFAMILY SSF51351 2 222 2.36E-58 T 10-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CJM129_RS07490 930dc6d9fae653705a0d01974d6e2e61 223 PANTHER PTHR21139 1 222 1.9E-48 T 10-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CJM129_RS07490 930dc6d9fae653705a0d01974d6e2e61 223 Gene3D G3DSA:3.20.20.70 2 222 5.7E-57 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS07490 930dc6d9fae653705a0d01974d6e2e61 223 ProSitePatterns PS00171 Triosephosphate isomerase active site. 149 159 - T 10-11-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 CJM129_RS01410 11f02a9d8da17c5f48badaf6f3d477dc 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 278 37.575 T 10-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CJM129_RS01410 11f02a9d8da17c5f48badaf6f3d477dc 282 PANTHER PTHR21299 1 279 2.5E-129 T 10-11-2016 CJM129_RS01410 11f02a9d8da17c5f48badaf6f3d477dc 282 SUPERFAMILY SSF52374 1 278 6.33E-103 T 10-11-2016 CJM129_RS01410 11f02a9d8da17c5f48badaf6f3d477dc 282 Pfam PF02569 Pantoate-beta-alanine ligase 3 276 1.7E-100 T 10-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CJM129_RS01410 11f02a9d8da17c5f48badaf6f3d477dc 282 Gene3D G3DSA:3.30.1300.10 174 279 8.2E-32 T 10-11-2016 CJM129_RS01410 11f02a9d8da17c5f48badaf6f3d477dc 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 278 7.6E-104 T 10-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CJM129_RS01410 11f02a9d8da17c5f48badaf6f3d477dc 282 PANTHER PTHR21299:SF1 1 279 2.5E-129 T 10-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 CJM129_RS01410 11f02a9d8da17c5f48badaf6f3d477dc 282 Gene3D G3DSA:3.40.50.620 1 173 3.8E-74 T 10-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJM129_RS01410 11f02a9d8da17c5f48badaf6f3d477dc 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 82 5.1E-7 T 10-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJM129_RS01930 52f1bc2e38e0af5e09995a80ee07445e 181 SUPERFAMILY SSF56747 5 179 2.48E-90 T 10-11-2016 CJM129_RS01930 52f1bc2e38e0af5e09995a80ee07445e 181 Pfam PF08966 Domain of unknown function (DUF1882) 3 74 2.4E-34 T 10-11-2016 IPR015061 Domain of unknown function DUF1882 CJM129_RS01930 52f1bc2e38e0af5e09995a80ee07445e 181 Gene3D G3DSA:3.90.920.20 3 181 2.8E-98 T 10-11-2016 CJM129_RS03075 4b8d7c2b858db9679f6fdf3f36148bf1 292 SUPERFAMILY SSF53335 5 290 1.08E-48 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03075 4b8d7c2b858db9679f6fdf3f36148bf1 292 PANTHER PTHR22807 1 291 7.1E-72 T 10-11-2016 CJM129_RS03075 4b8d7c2b858db9679f6fdf3f36148bf1 292 Pfam PF01189 16S rRNA methyltransferase RsmB/F 93 289 5.4E-45 T 10-11-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS03075 4b8d7c2b858db9679f6fdf3f36148bf1 292 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 104 114 9.0E-23 T 10-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS03075 4b8d7c2b858db9679f6fdf3f36148bf1 292 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 216 232 9.0E-23 T 10-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS03075 4b8d7c2b858db9679f6fdf3f36148bf1 292 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 273 290 9.0E-23 T 10-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS03075 4b8d7c2b858db9679f6fdf3f36148bf1 292 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 170 182 9.0E-23 T 10-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS03075 4b8d7c2b858db9679f6fdf3f36148bf1 292 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 75 89 9.0E-23 T 10-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJM129_RS03075 4b8d7c2b858db9679f6fdf3f36148bf1 292 Gene3D G3DSA:3.40.50.150 87 290 3.2E-54 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06735 707cd84fd4fd81d566eb4eefafd16599 95 Gene3D G3DSA:2.30.30.290 13 92 3.2E-18 T 10-11-2016 IPR023385 YopX-like domain, beta barrel type CJM129_RS06735 707cd84fd4fd81d566eb4eefafd16599 95 Pfam PF09643 YopX protein 9 89 1.1E-13 T 10-11-2016 IPR019096 YopX protein CJM129_RS06735 707cd84fd4fd81d566eb4eefafd16599 95 SUPERFAMILY SSF159006 3 91 6.41E-21 T 10-11-2016 CJM129_RS06995 b9995372ce2332022693641348d68267 76 Gene3D G3DSA:1.10.1200.10 4 76 4.1E-9 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS06995 b9995372ce2332022693641348d68267 76 SUPERFAMILY SSF47336 1 75 4.32E-9 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS01935 c27612c8e82a1063422360ab051f6ef7 278 SUPERFAMILY SSF110997 204 271 7.85E-5 T 10-11-2016 IPR007730 Sporulation-related domain GO:0042834 CJM129_RS01935 c27612c8e82a1063422360ab051f6ef7 278 Pfam PF05036 Sporulation related domain 203 265 3.8E-7 T 10-11-2016 IPR007730 Sporulation-related domain GO:0042834 CJM129_RS01935 c27612c8e82a1063422360ab051f6ef7 278 Gene3D G3DSA:3.30.70.1070 203 265 2.9E-4 T 10-11-2016 IPR007730 Sporulation-related domain GO:0042834 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 340 1.5E-155 T 10-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 PANTHER PTHR19375 10 330 2.3E-152 T 10-11-2016 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 Gene3D G3DSA:3.30.420.40 164 190 4.1E-31 T 10-11-2016 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 Gene3D G3DSA:3.30.420.40 267 321 4.1E-31 T 10-11-2016 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 Gene3D G3DSA:3.90.640.10 191 262 2.1E-27 T 10-11-2016 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.3E-62 T 10-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.3E-62 T 10-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 1.3E-62 T 10-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 1.3E-62 T 10-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.3E-62 T 10-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 SUPERFAMILY SSF53067 10 150 8.39E-39 T 10-11-2016 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 SUPERFAMILY SSF53067 153 337 2.83E-46 T 10-11-2016 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 Pfam PF06723 MreB/Mbl protein 12 340 1.4E-143 T 10-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 Gene3D G3DSA:3.30.420.40 11 163 3.2E-46 T 10-11-2016 CJM129_RS01325 de39c56b2dc66d204ba5f2f04dd37036 346 PANTHER PTHR19375:SF117 10 330 2.3E-152 T 10-11-2016 CJM129_RS01585 46d4cf022bb55aba46dc2c000b763620 94 Gene3D G3DSA:3.30.70.20 5 69 3.8E-14 T 10-11-2016 CJM129_RS01585 46d4cf022bb55aba46dc2c000b763620 94 Pfam PF12838 4Fe-4S dicluster domain 9 63 1.9E-7 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS01585 46d4cf022bb55aba46dc2c000b763620 94 SUPERFAMILY SSF54862 5 69 4.68E-15 T 10-11-2016 CJM129_RS01585 46d4cf022bb55aba46dc2c000b763620 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS00665 b92b7d6f8e90b6798b730c1d4bbb647b 457 Gene3D G3DSA:2.70.70.10 283 435 4.6E-27 T 10-11-2016 CJM129_RS00665 b92b7d6f8e90b6798b730c1d4bbb647b 457 SUPERFAMILY SSF51261 174 432 5.23E-43 T 10-11-2016 IPR011055 Duplicated hybrid motif CJM129_RS00665 b92b7d6f8e90b6798b730c1d4bbb647b 457 Pfam PF01551 Peptidase family M23 335 427 1.7E-17 T 10-11-2016 IPR016047 Peptidase M23 CJM129_RS00665 b92b7d6f8e90b6798b730c1d4bbb647b 457 PANTHER PTHR21666 192 443 1.9E-17 T 10-11-2016 CJM129_RS01110 1be9eacb284ffd6e98c0386ac8e139e4 182 PANTHER PTHR13061 7 172 5.4E-74 T 10-11-2016 CJM129_RS01110 1be9eacb284ffd6e98c0386ac8e139e4 182 Gene3D G3DSA:2.160.10.10 6 178 1.5E-50 T 10-11-2016 CJM129_RS01110 1be9eacb284ffd6e98c0386ac8e139e4 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 9 43 4.4E-5 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS01110 1be9eacb284ffd6e98c0386ac8e139e4 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 100 134 6.8E-8 T 10-11-2016 IPR001451 Hexapeptide repeat CJM129_RS01110 1be9eacb284ffd6e98c0386ac8e139e4 182 SUPERFAMILY SSF51161 5 178 4.71E-49 T 10-11-2016 IPR011004 Trimeric LpxA-like CJM129_RS05345 d9d46e79467c368def9218a954815660 350 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 321 1.9E-37 T 10-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CJM129_RS05345 d9d46e79467c368def9218a954815660 350 PANTHER PTHR30482 10 76 9.7E-89 T 10-11-2016 CJM129_RS05345 d9d46e79467c368def9218a954815660 350 PANTHER PTHR30482 94 330 9.7E-89 T 10-11-2016 CJM129_RS05345 d9d46e79467c368def9218a954815660 350 PANTHER PTHR30482:SF10 94 330 9.7E-89 T 10-11-2016 CJM129_RS05345 d9d46e79467c368def9218a954815660 350 PANTHER PTHR30482:SF10 10 76 9.7E-89 T 10-11-2016 CJM129_RS01340 a5f1c3eec8fbe7ae719ff4d95bf509e1 140 Gene3D G3DSA:3.90.870.10 18 140 9.3E-6 T 10-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CJM129_RS01340 a5f1c3eec8fbe7ae719ff4d95bf509e1 140 SUPERFAMILY SSF55821 7 140 8.85E-11 T 10-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain CJM129_RS08610 35b515e81a52a015fac4e1e62ef61169 138 Pfam PF11396 Putative beta-lactamase-inhibitor-like, PepSY-like 54 133 1.5E-20 T 10-11-2016 IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like CJM129_RS08610 35b515e81a52a015fac4e1e62ef61169 138 SUPERFAMILY SSF160574 18 136 8.5E-35 T 10-11-2016 CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 SMART SM00490 449 528 2.0E-13 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 Pfam PF04851 Type III restriction enzyme, res subunit 224 376 2.5E-14 T 10-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 Pfam PF00271 Helicase conserved C-terminal domain 419 528 1.6E-14 T 10-11-2016 IPR001650 Helicase, C-terminal CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 SMART SM00487 222 406 5.7E-28 T 10-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 Gene3D G3DSA:3.40.50.300 215 400 1.5E-47 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 PANTHER PTHR24031:SF249 256 541 1.1E-49 T 10-11-2016 CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 PANTHER PTHR24031:SF249 214 239 1.1E-49 T 10-11-2016 CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 PANTHER PTHR24031 214 239 1.1E-49 T 10-11-2016 CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 PANTHER PTHR24031 256 541 1.1E-49 T 10-11-2016 CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 SUPERFAMILY SSF52540 272 542 2.21E-40 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02250 9340e0e9533dbe43265d732763b4f6bd 607 Gene3D G3DSA:3.40.50.300 401 571 9.7E-28 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07250 6d1150c4c68d26fd1672e8a22ac7421c 322 PANTHER PTHR30472 6 322 1.8E-137 T 10-11-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CJM129_RS07250 6d1150c4c68d26fd1672e8a22ac7421c 322 Gene3D G3DSA:1.10.3470.10 6 319 1.8E-70 T 10-11-2016 IPR029022 ABC transporter, BtuC-like CJM129_RS07250 6d1150c4c68d26fd1672e8a22ac7421c 322 PANTHER PTHR30472:SF27 6 322 1.8E-137 T 10-11-2016 CJM129_RS07250 6d1150c4c68d26fd1672e8a22ac7421c 322 Pfam PF01032 FecCD transport family 15 317 2.4E-68 T 10-11-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 CJM129_RS07250 6d1150c4c68d26fd1672e8a22ac7421c 322 SUPERFAMILY SSF81345 4 317 3.14E-67 T 10-11-2016 IPR029022 ABC transporter, BtuC-like CJM129_RS07170 07027d296eea1c44987bca41bf5684de 635 PANTHER PTHR41786 10 623 3.1E-14 T 10-11-2016 CJM129_RS07170 07027d296eea1c44987bca41bf5684de 635 PANTHER PTHR41786:SF1 10 623 3.1E-14 T 10-11-2016 CJM129_RS07170 07027d296eea1c44987bca41bf5684de 635 Pfam PF01973 Protein of unknown function DUF115 214 388 3.1E-46 T 10-11-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CJM129_RS04770 c0affdf3b33b96771df3408f91dd34bf 415 SUPERFAMILY SSF103473 3 405 3.79E-52 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS04770 c0affdf3b33b96771df3408f91dd34bf 415 PANTHER PTHR23508:SF5 5 373 2.0E-99 T 10-11-2016 CJM129_RS04770 c0affdf3b33b96771df3408f91dd34bf 415 Pfam PF07690 Major Facilitator Superfamily 49 345 9.2E-24 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS04770 c0affdf3b33b96771df3408f91dd34bf 415 PANTHER PTHR23508 5 373 2.0E-99 T 10-11-2016 CJM129_RS04770 c0affdf3b33b96771df3408f91dd34bf 415 Gene3D G3DSA:1.20.1250.20 6 207 6.8E-18 T 10-11-2016 CJM129_RS04770 c0affdf3b33b96771df3408f91dd34bf 415 Gene3D G3DSA:1.20.1250.20 232 401 9.0E-10 T 10-11-2016 CJM129_RS00955 2f74b29c1615c68cd7179b82b732090a 232 Pfam PF01936 NYN domain 6 139 1.8E-27 T 10-11-2016 IPR021139 NYN domain, limkain-b1-type CJM129_RS00955 2f74b29c1615c68cd7179b82b732090a 232 Gene3D G3DSA:3.40.50.1010 2 141 7.3E-26 T 10-11-2016 IPR029060 PIN domain-like CJM129_RS00955 2f74b29c1615c68cd7179b82b732090a 232 PANTHER PTHR35811 2 183 6.3E-29 T 10-11-2016 CJM129_RS00955 2f74b29c1615c68cd7179b82b732090a 232 PANTHER PTHR35811:SF1 2 183 6.3E-29 T 10-11-2016 CJM129_RS00955 2f74b29c1615c68cd7179b82b732090a 232 Pfam PF12872 OST-HTH/LOTUS domain 161 205 2.9E-6 T 10-11-2016 IPR025605 OST-HTH/LOTUS domain CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 PANTHER PTHR10804 1 252 7.7E-81 T 10-11-2016 CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 10-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 PANTHER PTHR10804:SF41 1 252 7.7E-81 T 10-11-2016 CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 4.6E-21 T 10-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 4.6E-21 T 10-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 4.6E-21 T 10-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 4.6E-21 T 10-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 Pfam PF00557 Metallopeptidase family M24 11 241 1.9E-45 T 10-11-2016 IPR000994 Peptidase M24, structural domain CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 Gene3D G3DSA:3.90.230.10 1 250 4.3E-70 T 10-11-2016 IPR000994 Peptidase M24, structural domain CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 250 1.1E-87 T 10-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 Hamap MF_01974 Methionine aminopeptidase [map]. 2 252 34.661 T 10-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 CJM129_RS08735 3431fb4566a5ba9932edcff3c6a80a91 252 SUPERFAMILY SSF55920 1 250 8.9E-72 T 10-11-2016 IPR000994 Peptidase M24, structural domain CJM129_RS06475 a0bd305d917d453eef649574a96fc2bf 300 Pfam PF04055 Radical SAM superfamily 27 184 3.8E-13 T 10-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 CJM129_RS06475 a0bd305d917d453eef649574a96fc2bf 300 Gene3D G3DSA:3.20.20.70 26 226 9.6E-21 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS06475 a0bd305d917d453eef649574a96fc2bf 300 Pfam PF13394 4Fe-4S single cluster domain 27 119 7.4E-6 T 10-11-2016 CJM129_RS06475 a0bd305d917d453eef649574a96fc2bf 300 PANTHER PTHR11228:SF25 4 231 9.6E-41 T 10-11-2016 CJM129_RS06475 a0bd305d917d453eef649574a96fc2bf 300 SUPERFAMILY SSF102114 27 240 4.71E-21 T 10-11-2016 CJM129_RS06475 a0bd305d917d453eef649574a96fc2bf 300 PANTHER PTHR11228 4 231 9.6E-41 T 10-11-2016 CJM129_RS00790 bd08759b593d4a0182d7b65f810e25bf 218 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 216 1.8E-40 T 10-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS00790 bd08759b593d4a0182d7b65f810e25bf 218 PIRSF PIRSF015601 1 218 3.6E-40 T 10-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS00790 bd08759b593d4a0182d7b65f810e25bf 218 PANTHER PTHR30027 11 218 6.3E-21 T 10-11-2016 CJM129_RS00790 bd08759b593d4a0182d7b65f810e25bf 218 Gene3D G3DSA:3.40.1280.10 3 216 2.0E-32 T 10-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJM129_RS00790 bd08759b593d4a0182d7b65f810e25bf 218 Pfam PF04452 RNA methyltransferase 15 216 1.4E-37 T 10-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJM129_RS00790 bd08759b593d4a0182d7b65f810e25bf 218 PANTHER PTHR30027:SF3 11 218 6.3E-21 T 10-11-2016 CJM129_RS00790 bd08759b593d4a0182d7b65f810e25bf 218 SUPERFAMILY SSF75217 73 217 1.5E-28 T 10-11-2016 IPR029028 Alpha/beta knot methyltransferases CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 PANTHER PTHR11262 5 407 2.0E-215 T 10-11-2016 CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 402 3.3E-185 T 10-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 SUPERFAMILY SSF52540 62 395 9.7E-71 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 168 183 - T 10-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 Pfam PF06689 ClpX C4-type zinc finger 4 41 4.9E-9 T 10-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 Gene3D G3DSA:3.40.50.300 61 250 9.1E-50 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 Gene3D G3DSA:3.40.50.300 285 302 9.1E-50 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 Gene3D G3DSA:1.10.8.60 307 405 1.4E-38 T 10-11-2016 CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 SMART SM00994 2 43 4.3E-13 T 10-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 302 8.5E-49 T 10-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 SMART SM01086 308 402 2.5E-31 T 10-11-2016 IPR019489 Clp ATPase, C-terminal CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 308 379 7.1E-16 T 10-11-2016 IPR019489 Clp ATPase, C-terminal CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 1 405 49.898 T 10-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CJM129_RS01320 19ea0ab39f5dfe5ad3ca22e3f3856350 407 SMART SM00382 108 270 2.6E-12 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 Pfam PF00732 GMC oxidoreductase 140 332 1.1E-10 T 10-11-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 PANTHER PTHR11552 5 563 6.1E-77 T 10-11-2016 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 Gene3D G3DSA:3.50.50.60 497 564 4.0E-57 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 Gene3D G3DSA:3.50.50.60 232 337 4.0E-57 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 Gene3D G3DSA:3.50.50.60 440 453 4.0E-57 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 Gene3D G3DSA:3.50.50.60 7 154 4.0E-57 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 SUPERFAMILY SSF54373 404 479 5.89E-9 T 10-11-2016 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 Pfam PF05199 GMC oxidoreductase 430 557 2.5E-17 T 10-11-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 PANTHER PTHR11552:SF139 5 563 6.1E-77 T 10-11-2016 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 SUPERFAMILY SSF51905 506 567 2.42E-52 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS01990 71fd7ff383c0ad0bb35a9f0c1559eef0 573 SUPERFAMILY SSF51905 7 339 2.42E-52 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS05635 cdf2a56474bfa576ea43067cce9c15d4 215 Pfam PF13525 Outer membrane lipoprotein 30 165 3.4E-17 T 10-11-2016 CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 Pfam PF00772 DnaB-like helicase N terminal domain 4 95 7.3E-14 T 10-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 SUPERFAMILY SSF52540 413 439 1.64E-47 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 SUPERFAMILY SSF52540 170 382 1.64E-47 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 SUPERFAMILY SSF48024 3 104 1.24E-18 T 10-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 6 446 3.0E-129 T 10-11-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 SMART SM00382 187 384 3.0E-5 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 Gene3D G3DSA:3.40.50.300 162 446 2.0E-89 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 PANTHER PTHR30153 6 386 9.0E-127 T 10-11-2016 CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 PANTHER PTHR30153 408 456 9.0E-127 T 10-11-2016 CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 Pfam PF03796 DnaB-like helicase C terminal domain 170 444 8.9E-95 T 10-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 CJM129_RS02700 8a399688817135ae8129f82ccb0621a3 458 Gene3D G3DSA:1.10.860.10 6 96 1.5E-12 T 10-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CJM129_RS01435 d9f052fd9459e90499318af60bed4c40 249 PIRSF PIRSF004846 1 249 9.9E-51 T 10-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CJM129_RS01435 d9f052fd9459e90499318af60bed4c40 249 Pfam PF13531 Bacterial extracellular solute-binding protein 22 246 1.2E-33 T 10-11-2016 CJM129_RS01435 d9f052fd9459e90499318af60bed4c40 249 PANTHER PTHR30632:SF0 4 247 9.5E-30 T 10-11-2016 CJM129_RS01435 d9f052fd9459e90499318af60bed4c40 249 Gene3D G3DSA:3.40.190.10 133 188 1.8E-13 T 10-11-2016 CJM129_RS01435 d9f052fd9459e90499318af60bed4c40 249 SUPERFAMILY SSF53850 20 249 6.52E-47 T 10-11-2016 CJM129_RS01435 d9f052fd9459e90499318af60bed4c40 249 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 27 245 9.2E-50 T 10-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 CJM129_RS01435 d9f052fd9459e90499318af60bed4c40 249 Gene3D G3DSA:3.40.190.10 22 132 5.5E-26 T 10-11-2016 CJM129_RS01435 d9f052fd9459e90499318af60bed4c40 249 PANTHER PTHR30632 4 247 9.5E-30 T 10-11-2016 CJM129_RS05700 307219d71979f0e1392090e7c52aaa4b 300 Gene3D G3DSA:2.70.70.10 125 263 1.2E-44 T 10-11-2016 CJM129_RS05700 307219d71979f0e1392090e7c52aaa4b 300 Pfam PF01551 Peptidase family M23 162 255 2.1E-30 T 10-11-2016 IPR016047 Peptidase M23 CJM129_RS05700 307219d71979f0e1392090e7c52aaa4b 300 PANTHER PTHR21666 138 270 7.4E-43 T 10-11-2016 CJM129_RS05700 307219d71979f0e1392090e7c52aaa4b 300 SUPERFAMILY SSF51261 13 262 7.32E-54 T 10-11-2016 IPR011055 Duplicated hybrid motif CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 Hamap MF_01151 Protein GrpE [grpE]. 3 175 19.774 T 10-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 Gene3D G3DSA:2.30.22.10 124 175 2.4E-23 T 10-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 PANTHER PTHR21237 9 175 1.9E-49 T 10-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 SUPERFAMILY SSF58014 26 120 1.44E-24 T 10-11-2016 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 PRINTS PR00773 GrpE protein signature 127 142 5.5E-28 T 10-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 PRINTS PR00773 GrpE protein signature 154 173 5.5E-28 T 10-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 PRINTS PR00773 GrpE protein signature 46 62 5.5E-28 T 10-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 PRINTS PR00773 GrpE protein signature 74 89 5.5E-28 T 10-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 SUPERFAMILY SSF51064 127 175 1.57E-16 T 10-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 ProSitePatterns PS01071 grpE protein signature. 130 173 - T 10-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 Gene3D G3DSA:3.90.20.20 25 119 5.1E-25 T 10-11-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil CJM129_RS03650 bc367cc6643864316f5b2be8a647fbb9 175 Pfam PF01025 GrpE 13 175 2.0E-49 T 10-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 PANTHER PTHR11693 1 294 6.1E-83 T 10-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 Gene3D G3DSA:1.10.287.80 19 60 4.1E-25 T 10-11-2016 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 Gene3D G3DSA:1.10.287.80 208 241 4.1E-25 T 10-11-2016 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 PRINTS PR00126 ATP synthase gamma subunit signature 174 191 1.5E-31 T 10-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 PRINTS PR00126 ATP synthase gamma subunit signature 271 292 1.5E-31 T 10-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 PRINTS PR00126 ATP synthase gamma subunit signature 81 100 1.5E-31 T 10-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 PRINTS PR00126 ATP synthase gamma subunit signature 240 259 1.5E-31 T 10-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 293 31.901 T 10-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 Gene3D G3DSA:1.10.287.80 242 288 1.7E-25 T 10-11-2016 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 Gene3D G3DSA:3.40.1380.10 75 200 1.8E-34 T 10-11-2016 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 Pfam PF00231 ATP synthase 3 292 1.4E-79 T 10-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 292 1.5E-89 T 10-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 CJM129_RS00540 afa45e09532891dba9d91e8028f2cc76 294 SUPERFAMILY SSF52943 3 292 2.88E-80 T 10-11-2016 IPR023633 ATPase, F1 complex, gamma subunit domain CJM129_RS01385 e3a65857833c62d6ac8f5cfbe370c80b 250 Pfam PF13531 Bacterial extracellular solute-binding protein 23 249 1.2E-33 T 10-11-2016 CJM129_RS01385 e3a65857833c62d6ac8f5cfbe370c80b 250 PANTHER PTHR30368 12 249 5.4E-26 T 10-11-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CJM129_RS01385 e3a65857833c62d6ac8f5cfbe370c80b 250 SUPERFAMILY SSF53850 18 249 3.02E-38 T 10-11-2016 CJM129_RS01385 e3a65857833c62d6ac8f5cfbe370c80b 250 Gene3D G3DSA:3.40.190.10 117 247 1.1E-23 T 10-11-2016 CJM129_RS01385 e3a65857833c62d6ac8f5cfbe370c80b 250 Gene3D G3DSA:3.40.190.10 20 116 1.2E-12 T 10-11-2016 CJM129_RS06740 690517d1eaaa985af501e6f40ee2afbe 243 Pfam PF03374 Phage antirepressor protein KilAC domain 136 240 2.6E-23 T 10-11-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 CJM129_RS06740 690517d1eaaa985af501e6f40ee2afbe 243 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 17 97 8.8E-19 T 10-11-2016 IPR014054 Bacteriophage regulatory protein, Rha family CJM129_RS07735 d02f36cb521f886d6ce7eb34f8796fcc 229 SUPERFAMILY SSF101386 1 228 2.43E-78 T 10-11-2016 CJM129_RS07735 d02f36cb521f886d6ce7eb34f8796fcc 229 Pfam PF08761 dUTPase 7 187 1.2E-34 T 10-11-2016 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 CJM129_RS04575 1a1ecafa44d960ccc8531d75c452996c 169 Gene3D G3DSA:2.50.20.10 21 169 6.4E-17 T 10-11-2016 CJM129_RS04575 1a1ecafa44d960ccc8531d75c452996c 169 SUPERFAMILY SSF89392 13 168 1.84E-21 T 10-11-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX CJM129_RS04575 1a1ecafa44d960ccc8531d75c452996c 169 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 22 89 1.0E-9 T 10-11-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CJM129_RS01465 6aee6dfde64a1bf730eefc5bf5b2d161 104 PANTHER PTHR30561 1 104 9.9E-33 T 10-11-2016 CJM129_RS01465 6aee6dfde64a1bf730eefc5bf5b2d161 104 SUPERFAMILY SSF103481 4 101 3.14E-14 T 10-11-2016 CJM129_RS01465 6aee6dfde64a1bf730eefc5bf5b2d161 104 PANTHER PTHR30561:SF8 1 104 9.9E-33 T 10-11-2016 CJM129_RS01465 6aee6dfde64a1bf730eefc5bf5b2d161 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.7E-23 T 10-11-2016 IPR000390 Small multidrug resistance protein family GO:0016021 CJM129_RS06885 dc3ca3f7fc40d46578ddacb04d66bbff 180 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 9 122 1.4E-4 T 10-11-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component CJM129_RS03825 aad36fe479730a1889816ed9fbe952ce 372 SUPERFAMILY SSF81301 13 143 8.99E-28 T 10-11-2016 CJM129_RS03825 aad36fe479730a1889816ed9fbe952ce 372 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 173 227 7.5E-5 T 10-11-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CJM129_RS03825 aad36fe479730a1889816ed9fbe952ce 372 SUPERFAMILY SSF81891 147 364 1.57E-29 T 10-11-2016 CJM129_RS03825 aad36fe479730a1889816ed9fbe952ce 372 PANTHER PTHR13734 11 314 3.9E-42 T 10-11-2016 CJM129_RS03825 aad36fe479730a1889816ed9fbe952ce 372 Gene3D G3DSA:1.10.3090.10 148 289 1.5E-21 T 10-11-2016 CJM129_RS03825 aad36fe479730a1889816ed9fbe952ce 372 Pfam PF01743 Poly A polymerase head domain 28 148 4.9E-19 T 10-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 CJM129_RS03825 aad36fe479730a1889816ed9fbe952ce 372 Gene3D G3DSA:3.30.460.10 13 147 4.3E-29 T 10-11-2016 CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 Gene3D G3DSA:1.10.3680.10 48 177 3.0E-15 T 10-11-2016 IPR029024 TerB-like CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 Pfam PF05099 Tellurite resistance protein TerB 53 171 3.7E-13 T 10-11-2016 IPR007791 Co-chaperone DjlA, N-terminal CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 PRINTS PR00625 DnaJ domain signature 193 211 4.3E-8 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 PRINTS PR00625 DnaJ domain signature 211 226 4.3E-8 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 PRINTS PR00625 DnaJ domain signature 235 255 4.3E-8 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 Gene3D G3DSA:1.10.287.110 187 256 1.5E-14 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 SUPERFAMILY SSF158682 48 202 9.55E-18 T 10-11-2016 IPR029024 TerB-like CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 SMART SM00271 190 255 9.4E-15 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 Pfam PF00226 DnaJ domain 192 252 2.3E-13 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS04630 fd2c98e52108aaed046e7e9653d49e71 256 SUPERFAMILY SSF46565 187 255 3.79E-16 T 10-11-2016 IPR001623 DnaJ domain CJM129_RS00480 10efeedeb1ae037684c1fbfd94dc747e 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 6.2E-34 T 10-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00480 10efeedeb1ae037684c1fbfd94dc747e 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 10-11-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00480 10efeedeb1ae037684c1fbfd94dc747e 102 PANTHER PTHR21349 1 101 6.3E-25 T 10-11-2016 CJM129_RS00480 10efeedeb1ae037684c1fbfd94dc747e 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 22.999 T 10-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS00480 10efeedeb1ae037684c1fbfd94dc747e 102 SUPERFAMILY SSF141091 1 100 1.83E-30 T 10-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CJM129_RS00480 10efeedeb1ae037684c1fbfd94dc747e 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 9.0E-32 T 10-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 CJM129_RS01200 d5ae81daa6aae85295548af66cb9227a 285 SUPERFAMILY SSF109604 2 273 1.1E-53 T 10-11-2016 CJM129_RS01200 d5ae81daa6aae85295548af66cb9227a 285 Gene3D G3DSA:1.10.3150.10 3 272 2.8E-59 T 10-11-2016 IPR013976 Metal-dependent hydrolase HDOD CJM129_RS01200 d5ae81daa6aae85295548af66cb9227a 285 Pfam PF08668 HDOD domain 16 212 3.3E-31 T 10-11-2016 IPR013976 Metal-dependent hydrolase HDOD CJM129_RS01200 d5ae81daa6aae85295548af66cb9227a 285 PANTHER PTHR33525 1 209 8.5E-25 T 10-11-2016 CJM129_RS03945 0499ecba9bf3dda3865367ac775751f2 239 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 230 2.9E-70 T 10-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CJM129_RS03945 0499ecba9bf3dda3865367ac775751f2 239 SUPERFAMILY SSF53448 2 238 2.11E-49 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS03945 0499ecba9bf3dda3865367ac775751f2 239 Gene3D G3DSA:3.90.550.10 2 236 4.3E-58 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS03945 0499ecba9bf3dda3865367ac775751f2 239 PANTHER PTHR21485 1 235 2.1E-75 T 10-11-2016 CJM129_RS03945 0499ecba9bf3dda3865367ac775751f2 239 PANTHER PTHR21485:SF4 1 235 2.1E-75 T 10-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CJM129_RS03945 0499ecba9bf3dda3865367ac775751f2 239 Pfam PF02348 Cytidylyltransferase 1 211 3.4E-46 T 10-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CJM129_RS08270 370c47acd2587b6cc9369f07c7c2b456 341 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 2 332 9.8E-116 T 10-11-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CJM129_RS08270 370c47acd2587b6cc9369f07c7c2b456 341 PANTHER PTHR10361:SF31 2 333 5.9E-118 T 10-11-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CJM129_RS08270 370c47acd2587b6cc9369f07c7c2b456 341 PANTHER PTHR10361 2 333 5.9E-118 T 10-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CJM129_RS08270 370c47acd2587b6cc9369f07c7c2b456 341 PIRSF PIRSF005508 1 341 1.8E-126 T 10-11-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CJM129_RS08270 370c47acd2587b6cc9369f07c7c2b456 341 Pfam PF01758 Sodium Bile acid symporter family 47 243 2.3E-54 T 10-11-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CJM129_RS08600 48409cd2b18fcb729e5ffc83acbe1d8a 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 449 2.9E-175 T 10-11-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 CJM129_RS08600 48409cd2b18fcb729e5ffc83acbe1d8a 454 Pfam PF03315 Serine dehydratase beta chain 3 151 7.1E-47 T 10-11-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 CJM129_RS08600 48409cd2b18fcb729e5ffc83acbe1d8a 454 Gene3D G3DSA:3.30.1330.90 9 154 8.1E-46 T 10-11-2016 IPR029009 Allosteric substrate binding domain CJM129_RS08600 48409cd2b18fcb729e5ffc83acbe1d8a 454 PANTHER PTHR30182 1 449 1.5E-189 T 10-11-2016 CJM129_RS08600 48409cd2b18fcb729e5ffc83acbe1d8a 454 SUPERFAMILY SSF143548 15 154 1.83E-38 T 10-11-2016 IPR029009 Allosteric substrate binding domain CJM129_RS08600 48409cd2b18fcb729e5ffc83acbe1d8a 454 PANTHER PTHR30182:SF1 1 449 1.5E-189 T 10-11-2016 CJM129_RS08600 48409cd2b18fcb729e5ffc83acbe1d8a 454 Pfam PF03313 Serine dehydratase alpha chain 189 447 3.2E-89 T 10-11-2016 IPR005130 Serine dehydratase-like, alpha subunit CJM129_RS09265 1a90ecc61935d52c3e89f70b4aeb2e6b 87 SUPERFAMILY SSF56524 1 84 9.29E-23 T 10-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CJM129_RS09265 1a90ecc61935d52c3e89f70b4aeb2e6b 87 PANTHER PTHR19372 1 79 3.4E-15 T 10-11-2016 CJM129_RS09265 1a90ecc61935d52c3e89f70b4aeb2e6b 87 Gene3D G3DSA:3.90.420.10 2 84 3.3E-24 T 10-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CJM129_RS09265 1a90ecc61935d52c3e89f70b4aeb2e6b 87 Pfam PF00174 Oxidoreductase molybdopterin binding domain 2 79 3.6E-20 T 10-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 Pfam PF00771 FHIPEP family 36 712 9.4E-242 T 10-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 43 56 1.5E-53 T 10-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 147 163 1.5E-53 T 10-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 80 99 1.5E-53 T 10-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 247 261 1.5E-53 T 10-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 196 213 1.5E-53 T 10-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 166 184 1.5E-53 T 10-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PIRSF PIRSF005419 15 724 1.0E-221 T 10-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 25 720 9.0E-283 T 10-11-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PANTHER PTHR30161 7 352 9.2E-281 T 10-11-2016 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PANTHER PTHR30161 368 723 9.2E-281 T 10-11-2016 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PANTHER PTHR30161:SF1 7 352 9.2E-281 T 10-11-2016 CJM129_RS04245 7fe7888a362eccc1fd3b5d63b95c42de 724 PANTHER PTHR30161:SF1 368 723 9.2E-281 T 10-11-2016 CJM129_RS03305 5b90008f9d8308f425e058a8bfe74962 464 Pfam PF11186 Protein of unknown function (DUF2972) 254 461 3.6E-37 T 10-11-2016 IPR021353 Protein of unknown function DUF2972 CJM129_RS00225 48709840e5f4df11aa5de362d3fcbebc 596 Pfam PF02120 Flagellar hook-length control protein FliK 483 560 1.5E-13 T 10-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal CJM129_RS05085 9c9022a17f8fd74af4572e18b90e2559 148 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 16 127 1.1E-13 T 10-11-2016 IPR017734 Type VI secretion system, lipoprotein SciN CJM129_RS05085 9c9022a17f8fd74af4572e18b90e2559 148 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 20 127 1.7E-14 T 10-11-2016 IPR017734 Type VI secretion system, lipoprotein SciN CJM129_RS01705 c4805c36ef4d3b4481cc8140ffa70944 202 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 193 3.5E-43 T 10-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CJM129_RS01705 c4805c36ef4d3b4481cc8140ffa70944 202 PANTHER PTHR30309:SF0 1 201 3.8E-51 T 10-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CJM129_RS01705 c4805c36ef4d3b4481cc8140ffa70944 202 SMART SM01207 8 194 1.3E-70 T 10-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CJM129_RS01705 c4805c36ef4d3b4481cc8140ffa70944 202 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 202 18.056 T 10-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CJM129_RS01705 c4805c36ef4d3b4481cc8140ffa70944 202 PANTHER PTHR30309 1 201 3.8E-51 T 10-11-2016 CJM129_RS01705 c4805c36ef4d3b4481cc8140ffa70944 202 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 201 5.8E-47 T 10-11-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 CJM129_RS04905 3f50c711b01028915cdb1b9ef6075f43 466 Gene3D G3DSA:3.40.50.720 2 99 8.7E-4 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS04905 3f50c711b01028915cdb1b9ef6075f43 466 SUPERFAMILY SSF116726 147 211 4.71E-7 T 10-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJM129_RS04905 3f50c711b01028915cdb1b9ef6075f43 466 Gene3D G3DSA:3.30.70.1450 148 215 9.7E-6 T 10-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJM129_RS04905 3f50c711b01028915cdb1b9ef6075f43 466 Pfam PF02080 TrkA-C domain 148 208 6.2E-8 T 10-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJM129_RS08010 3a4d7cf305fa2978a5332b35490f2e11 245 Gene3D G3DSA:1.10.10.10 131 240 1.1E-31 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS08010 3a4d7cf305fa2978a5332b35490f2e11 245 SUPERFAMILY SSF46785 138 239 2.99E-16 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS08010 3a4d7cf305fa2978a5332b35490f2e11 245 PANTHER PTHR30432 131 240 3.4E-13 T 10-11-2016 CJM129_RS03525 c628300a7efb091784146ac3a32c179d 268 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 4 211 1.4E-12 T 10-11-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 CJM129_RS03525 c628300a7efb091784146ac3a32c179d 268 Gene3D G3DSA:3.40.720.10 2 227 1.1E-33 T 10-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJM129_RS03525 c628300a7efb091784146ac3a32c179d 268 SUPERFAMILY SSF53649 3 252 1.64E-38 T 10-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJM129_RS08550 b7dd9b6eba39f5b8ab0e914b0235f0f1 285 PANTHER PTHR11228:SF28 6 276 9.7E-26 T 10-11-2016 CJM129_RS08550 b7dd9b6eba39f5b8ab0e914b0235f0f1 285 Pfam PF13186 Iron-sulfur cluster-binding domain 211 277 1.8E-11 T 10-11-2016 IPR023885 4Fe4S-binding SPASM domain CJM129_RS08550 b7dd9b6eba39f5b8ab0e914b0235f0f1 285 Gene3D G3DSA:3.20.20.70 3 280 1.6E-22 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS08550 b7dd9b6eba39f5b8ab0e914b0235f0f1 285 SUPERFAMILY SSF102114 5 279 6.87E-24 T 10-11-2016 CJM129_RS08550 b7dd9b6eba39f5b8ab0e914b0235f0f1 285 PANTHER PTHR11228 6 276 9.7E-26 T 10-11-2016 CJM129_RS06965 d89a6efc59b750a4e63cda4c4b15a4e1 151 SUPERFAMILY SSF51230 75 148 9.95E-23 T 10-11-2016 IPR011053 Single hybrid motif CJM129_RS06965 d89a6efc59b750a4e63cda4c4b15a4e1 151 Gene3D G3DSA:2.40.50.100 71 149 8.4E-29 T 10-11-2016 CJM129_RS06965 d89a6efc59b750a4e63cda4c4b15a4e1 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 78 91 5.4E-18 T 10-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CJM129_RS06965 d89a6efc59b750a4e63cda4c4b15a4e1 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 110 123 5.4E-18 T 10-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CJM129_RS06965 d89a6efc59b750a4e63cda4c4b15a4e1 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 95 109 5.4E-18 T 10-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CJM129_RS06965 d89a6efc59b750a4e63cda4c4b15a4e1 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 4 150 7.7E-46 T 10-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 CJM129_RS06965 d89a6efc59b750a4e63cda4c4b15a4e1 151 Pfam PF00364 Biotin-requiring enzyme 76 147 1.9E-20 T 10-11-2016 IPR000089 Biotin/lipoyl attachment CJM129_RS06965 d89a6efc59b750a4e63cda4c4b15a4e1 151 PANTHER PTHR23151 5 149 4.8E-34 T 10-11-2016 CJM129_RS05460 76bfa9ca3c600b1342e4ee60ad1b497c 342 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 337 26.265 T 10-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS05460 76bfa9ca3c600b1342e4ee60ad1b497c 342 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 171 314 6.9E-41 T 10-11-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS05460 76bfa9ca3c600b1342e4ee60ad1b497c 342 Gene3D G3DSA:3.40.50.2000 170 308 6.6E-33 T 10-11-2016 CJM129_RS05460 76bfa9ca3c600b1342e4ee60ad1b497c 342 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 142 3.1E-23 T 10-11-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS05460 76bfa9ca3c600b1342e4ee60ad1b497c 342 PANTHER PTHR21015:SF22 3 331 1.8E-55 T 10-11-2016 CJM129_RS05460 76bfa9ca3c600b1342e4ee60ad1b497c 342 SUPERFAMILY SSF53756 1 329 5.14E-81 T 10-11-2016 CJM129_RS05460 76bfa9ca3c600b1342e4ee60ad1b497c 342 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 331 9.9E-86 T 10-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 CJM129_RS05460 76bfa9ca3c600b1342e4ee60ad1b497c 342 Gene3D G3DSA:3.40.50.2000 1 169 4.2E-36 T 10-11-2016 CJM129_RS05460 76bfa9ca3c600b1342e4ee60ad1b497c 342 PANTHER PTHR21015 3 331 1.8E-55 T 10-11-2016 CJM129_RS00905 160ea81d77bc67766c2af1bfe46125a9 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 125 234 4.5E-39 T 10-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CJM129_RS00905 160ea81d77bc67766c2af1bfe46125a9 253 PANTHER PTHR30625 47 249 2.8E-43 T 10-11-2016 CJM129_RS07035 6472fac57ee2af9148ff28f3dd3e421c 75 SUPERFAMILY SSF47336 13 73 8.48E-7 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS07035 6472fac57ee2af9148ff28f3dd3e421c 75 Gene3D G3DSA:1.10.1200.10 10 70 3.3E-5 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS02575 af84c9d8e47ab9a46cceafad2d7f263f 185 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 175 4.8E-33 T 10-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CJM129_RS02575 af84c9d8e47ab9a46cceafad2d7f263f 185 Gene3D G3DSA:3.40.920.10 1 179 2.8E-35 T 10-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CJM129_RS02575 af84c9d8e47ab9a46cceafad2d7f263f 185 PANTHER PTHR32154:SF17 1 182 3.3E-22 T 10-11-2016 CJM129_RS02575 af84c9d8e47ab9a46cceafad2d7f263f 185 PANTHER PTHR32154 1 182 3.3E-22 T 10-11-2016 CJM129_RS02575 af84c9d8e47ab9a46cceafad2d7f263f 185 SUPERFAMILY SSF53323 1 180 3.53E-37 T 10-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CJM129_RS05795 26163a3c5cd75374c1eac5ff46ffc316 200 SUPERFAMILY SSF52833 4 166 2.75E-14 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS05795 26163a3c5cd75374c1eac5ff46ffc316 200 Pfam PF00578 AhpC/TSA family 65 134 2.3E-5 T 10-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 CJM129_RS05795 26163a3c5cd75374c1eac5ff46ffc316 200 Gene3D G3DSA:3.40.30.10 3 198 4.8E-18 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS03800 f9727e1c1255ce4fecf03473fb8dee58 304 SUPERFAMILY SSF50978 108 298 3.36E-22 T 10-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CJM129_RS03800 f9727e1c1255ce4fecf03473fb8dee58 304 SUPERFAMILY SSF50978 22 58 3.36E-22 T 10-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CJM129_RS03800 f9727e1c1255ce4fecf03473fb8dee58 304 Gene3D G3DSA:2.130.10.10 23 296 4.0E-17 T 10-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJM129_RS01975 488e1407ce825d63c85a4b18733230d5 609 Gene3D G3DSA:3.40.50.300 44 296 2.5E-28 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01975 488e1407ce825d63c85a4b18733230d5 609 Gene3D G3DSA:3.40.50.300 332 351 2.5E-28 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01975 488e1407ce825d63c85a4b18733230d5 609 Pfam PF00350 Dynamin family 64 217 4.6E-22 T 10-11-2016 IPR022812 Dynamin superfamily CJM129_RS01975 488e1407ce825d63c85a4b18733230d5 609 PRINTS PR00195 Dynamin signature 201 219 5.8E-5 T 10-11-2016 IPR022812 Dynamin superfamily CJM129_RS01975 488e1407ce825d63c85a4b18733230d5 609 PRINTS PR00195 Dynamin signature 61 79 5.8E-5 T 10-11-2016 IPR022812 Dynamin superfamily CJM129_RS01975 488e1407ce825d63c85a4b18733230d5 609 PRINTS PR00195 Dynamin signature 148 165 5.8E-5 T 10-11-2016 IPR022812 Dynamin superfamily CJM129_RS01975 488e1407ce825d63c85a4b18733230d5 609 SUPERFAMILY SSF52540 48 280 1.46E-34 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06150 82008cce06a7bb43b7a7b6acb03a91e2 211 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 10-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJM129_RS06150 82008cce06a7bb43b7a7b6acb03a91e2 211 PANTHER PTHR24220 5 206 3.7E-62 T 10-11-2016 CJM129_RS06150 82008cce06a7bb43b7a7b6acb03a91e2 211 SUPERFAMILY SSF52540 3 209 6.03E-50 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06150 82008cce06a7bb43b7a7b6acb03a91e2 211 Gene3D G3DSA:3.40.50.300 2 206 3.9E-52 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06150 82008cce06a7bb43b7a7b6acb03a91e2 211 Pfam PF00005 ABC transporter 19 160 4.4E-30 T 10-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJM129_RS06150 82008cce06a7bb43b7a7b6acb03a91e2 211 SMART SM00382 27 208 1.1E-10 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS08355 c2c8cc86f801f463c7c848e6526d7bfd 129 PANTHER PTHR11058 1 129 2.7E-26 T 10-11-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 CJM129_RS08355 c2c8cc86f801f463c7c848e6526d7bfd 129 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 41 125 1.3E-26 T 10-11-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 CJM129_RS08355 c2c8cc86f801f463c7c848e6526d7bfd 129 PANTHER PTHR11058:SF5 1 129 2.7E-26 T 10-11-2016 CJM129_RS08230 e6e768fb03bc12d0c11e363a2938ac09 395 PANTHER PTHR30408:SF2 1 238 8.3E-31 T 10-11-2016 CJM129_RS08230 e6e768fb03bc12d0c11e363a2938ac09 395 SUPERFAMILY SSF116734 209 395 7.52E-37 T 10-11-2016 CJM129_RS08230 e6e768fb03bc12d0c11e363a2938ac09 395 SUPERFAMILY SSF116734 6 201 1.36E-41 T 10-11-2016 CJM129_RS08230 e6e768fb03bc12d0c11e363a2938ac09 395 PANTHER PTHR30408 1 238 8.3E-31 T 10-11-2016 CJM129_RS08230 e6e768fb03bc12d0c11e363a2938ac09 395 Pfam PF01420 Type I restriction modification DNA specificity domain 214 366 4.1E-25 T 10-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CJM129_RS08230 e6e768fb03bc12d0c11e363a2938ac09 395 Pfam PF01420 Type I restriction modification DNA specificity domain 9 180 9.7E-22 T 10-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CJM129_RS05135 aeda06e7d4a0b95bad062c10c5d3bd11 245 Gene3D G3DSA:1.25.40.20 73 187 4.2E-14 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS05135 aeda06e7d4a0b95bad062c10c5d3bd11 245 Pfam PF12796 Ankyrin repeats (3 copies) 74 167 3.2E-8 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS05135 aeda06e7d4a0b95bad062c10c5d3bd11 245 SUPERFAMILY SSF48403 66 185 2.33E-14 T 10-11-2016 IPR020683 Ankyrin repeat-containing domain CJM129_RS05135 aeda06e7d4a0b95bad062c10c5d3bd11 245 SMART SM00248 62 94 1200.0 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS05135 aeda06e7d4a0b95bad062c10c5d3bd11 245 SMART SM00248 138 168 23.0 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS05135 aeda06e7d4a0b95bad062c10c5d3bd11 245 SMART SM00248 99 128 1.6 T 10-11-2016 IPR002110 Ankyrin repeat GO:0005515 CJM129_RS05135 aeda06e7d4a0b95bad062c10c5d3bd11 245 PANTHER PTHR24188 71 188 4.7E-12 T 10-11-2016 CJM129_RS01955 624032dc02a76cf40d69e519df7481d6 260 SUPERFAMILY SSF81343 2 248 3.43E-78 T 10-11-2016 CJM129_RS01955 624032dc02a76cf40d69e519df7481d6 260 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 110 221 2.3E-17 T 10-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 CJM129_RS01955 624032dc02a76cf40d69e519df7481d6 260 PIRSF PIRSF000177 1 258 1.5E-134 T 10-11-2016 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit GO:0006099 CJM129_RS01955 624032dc02a76cf40d69e519df7481d6 260 Gene3D G3DSA:1.20.950.10 2 251 6.9E-97 T 10-11-2016 CJM129_RS06925 c8941c4832622ebcdc8211eaef1e7915 447 PANTHER PTHR32024 13 446 3.7E-143 T 10-11-2016 CJM129_RS06925 c8941c4832622ebcdc8211eaef1e7915 447 Pfam PF02386 Cation transport protein 30 430 7.1E-55 T 10-11-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CJM129_RS06925 c8941c4832622ebcdc8211eaef1e7915 447 PANTHER PTHR32024:SF1 13 446 3.7E-143 T 10-11-2016 CJM129_RS06925 c8941c4832622ebcdc8211eaef1e7915 447 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 31 419 1.3E-126 T 10-11-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CJM129_RS05115 f0c464e52123b3151f4052bfd06c7326 302 PANTHER PTHR35564 24 292 2.1E-29 T 10-11-2016 CJM129_RS05115 f0c464e52123b3151f4052bfd06c7326 302 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 5 287 1.5E-47 T 10-11-2016 IPR010732 Type VI secretion, TssG-like CJM129_RS05115 f0c464e52123b3151f4052bfd06c7326 302 PANTHER PTHR35564:SF3 24 292 2.1E-29 T 10-11-2016 CJM129_RS05115 f0c464e52123b3151f4052bfd06c7326 302 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 17 287 1.4E-45 T 10-11-2016 IPR010732 Type VI secretion, TssG-like CJM129_RS06320 5f8a58bd53dc3fc6d4e1a1dcf73c2d20 241 Pfam PF15436 Plasminogen-binding protein pgbA N-terminal 24 235 5.9E-74 T 10-11-2016 IPR029276 Plasminogen-binding protein PgbA, N-terminal CJM129_RS07795 e75d9585cbae25ad075b1c9d5b9f471d 113 PIRSF PIRSF007248 1 113 5.0E-45 T 10-11-2016 IPR016511 Uncharacterised conserved protein UCP007248 CJM129_RS07795 e75d9585cbae25ad075b1c9d5b9f471d 113 ProDom PD351196 CJ1463 JHP0230 HP0245 37 112 8.0E-37 T 10-11-2016 CJM129_RS07795 e75d9585cbae25ad075b1c9d5b9f471d 113 Pfam PF10135 Rod binding protein 69 107 2.0E-5 T 10-11-2016 IPR019301 Flagellar protein FlgJ, N-terminal CJM129_RS01090 3fbf32c6404365ceefe006b7df68432f 148 SUPERFAMILY SSF55729 1 135 4.73E-26 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS01090 3fbf32c6404365ceefe006b7df68432f 148 Pfam PF13673 Acetyltransferase (GNAT) domain 32 128 3.7E-11 T 10-11-2016 IPR000182 GNAT domain GO:0008080 CJM129_RS01090 3fbf32c6404365ceefe006b7df68432f 148 Gene3D G3DSA:3.40.630.30 1 135 1.0E-25 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS01090 3fbf32c6404365ceefe006b7df68432f 148 PANTHER PTHR23091 1 134 2.3E-17 T 10-11-2016 CJM129_RS04685 814b2b100036c99b8c0f691da11b5a57 124 PIRSF PIRSF003230 1 124 7.9E-42 T 10-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CJM129_RS04685 814b2b100036c99b8c0f691da11b5a57 124 Gene3D G3DSA:3.10.129.10 1 122 8.3E-35 T 10-11-2016 IPR029069 HotDog domain CJM129_RS04685 814b2b100036c99b8c0f691da11b5a57 124 PANTHER PTHR31793:SF9 1 123 2.1E-27 T 10-11-2016 CJM129_RS04685 814b2b100036c99b8c0f691da11b5a57 124 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 2 107 1.8E-26 T 10-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CJM129_RS04685 814b2b100036c99b8c0f691da11b5a57 124 SUPERFAMILY SSF54637 2 122 2.03E-28 T 10-11-2016 IPR029069 HotDog domain CJM129_RS04685 814b2b100036c99b8c0f691da11b5a57 124 Pfam PF03061 Thioesterase superfamily 13 91 3.1E-14 T 10-11-2016 IPR006683 Thioesterase domain CJM129_RS04685 814b2b100036c99b8c0f691da11b5a57 124 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 4 21 - T 10-11-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 CJM129_RS04685 814b2b100036c99b8c0f691da11b5a57 124 PANTHER PTHR31793 1 123 2.1E-27 T 10-11-2016 CJM129_RS02960 ff7df184a26334854f20696e42251614 458 PIRSF PIRSF016636 1 458 4.1E-123 T 10-11-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CJM129_RS02960 ff7df184a26334854f20696e42251614 458 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 140 369 1.0E-22 T 10-11-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT CJM129_RS02960 ff7df184a26334854f20696e42251614 458 PIRSF PIRSF500217 1 458 4.0E-123 T 10-11-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 CJM129_RS02960 ff7df184a26334854f20696e42251614 458 PANTHER PTHR13285 1 428 8.7E-65 T 10-11-2016 CJM129_RS02960 ff7df184a26334854f20696e42251614 458 PANTHER PTHR13285:SF24 1 428 8.7E-65 T 10-11-2016 CJM129_RS05945 f889fb0279f53cb3dbfd54ab1b0b34cb 352 SUPERFAMILY SSF53448 92 253 1.35E-7 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS05945 f889fb0279f53cb3dbfd54ab1b0b34cb 352 Pfam PF06306 Beta-1,4-N-acetylgalactosaminyltransferase (CgtA) 1 345 8.9E-223 T 10-11-2016 IPR010446 Beta-1,4-N-acetylgalactosaminyltransferase CJM129_RS04205 85d6e5cab4dff5c96db2ddba8fc60f9d 213 SUPERFAMILY SSF52833 23 209 6.3E-25 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS04205 85d6e5cab4dff5c96db2ddba8fc60f9d 213 Pfam PF01323 DSBA-like thioredoxin domain 39 194 2.4E-7 T 10-11-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 CJM129_RS04205 85d6e5cab4dff5c96db2ddba8fc60f9d 213 PANTHER PTHR35891 25 213 1.0E-22 T 10-11-2016 CJM129_RS04205 85d6e5cab4dff5c96db2ddba8fc60f9d 213 Gene3D G3DSA:3.40.30.10 27 211 3.4E-35 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS06600 d1993beda01dbd332fb076c96a20a637 363 PANTHER PTHR32332:SF18 74 361 3.9E-146 T 10-11-2016 CJM129_RS06600 d1993beda01dbd332fb076c96a20a637 363 PANTHER PTHR32332:SF18 2 50 3.9E-146 T 10-11-2016 CJM129_RS06600 d1993beda01dbd332fb076c96a20a637 363 SUPERFAMILY SSF51412 7 293 4.88E-49 T 10-11-2016 CJM129_RS06600 d1993beda01dbd332fb076c96a20a637 363 SUPERFAMILY SSF51412 329 362 4.88E-49 T 10-11-2016 CJM129_RS06600 d1993beda01dbd332fb076c96a20a637 363 PANTHER PTHR32332 74 361 3.9E-146 T 10-11-2016 CJM129_RS06600 d1993beda01dbd332fb076c96a20a637 363 PANTHER PTHR32332 2 50 3.9E-146 T 10-11-2016 CJM129_RS06600 d1993beda01dbd332fb076c96a20a637 363 Pfam PF03060 Nitronate monooxygenase 6 361 6.9E-85 T 10-11-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CJM129_RS06600 d1993beda01dbd332fb076c96a20a637 363 Gene3D G3DSA:3.20.20.70 8 356 6.9E-50 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS03495 7ffbb9bfd8178ca5d1334c11616c9e83 395 PANTHER PTHR10120 3 394 3.4E-87 T 10-11-2016 CJM129_RS03495 7ffbb9bfd8178ca5d1334c11616c9e83 395 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 23 192 2.9E-38 T 10-11-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 CJM129_RS03495 7ffbb9bfd8178ca5d1334c11616c9e83 395 Gene3D G3DSA:3.30.2010.10 190 279 4.1E-18 T 10-11-2016 CJM129_RS03495 7ffbb9bfd8178ca5d1334c11616c9e83 395 PANTHER PTHR10120:SF24 3 394 3.4E-87 T 10-11-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 CJM129_RS03495 7ffbb9bfd8178ca5d1334c11616c9e83 395 Pfam PF01435 Peptidase family M48 197 395 3.2E-42 T 10-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CJM129_RS00585 8e90c1b462883cb645f19a9b1b28eacd 189 PANTHER PTHR10516 1 84 1.2E-16 T 10-11-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type CJM129_RS00585 8e90c1b462883cb645f19a9b1b28eacd 189 Gene3D G3DSA:3.10.50.40 127 141 2.4E-10 T 10-11-2016 CJM129_RS00585 8e90c1b462883cb645f19a9b1b28eacd 189 Gene3D G3DSA:3.10.50.40 2 81 2.4E-10 T 10-11-2016 CJM129_RS00585 8e90c1b462883cb645f19a9b1b28eacd 189 PANTHER PTHR10516:SF316 130 188 1.2E-16 T 10-11-2016 CJM129_RS00585 8e90c1b462883cb645f19a9b1b28eacd 189 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 82 4.6E-6 T 10-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 CJM129_RS00585 8e90c1b462883cb645f19a9b1b28eacd 189 PANTHER PTHR10516:SF316 1 84 1.2E-16 T 10-11-2016 CJM129_RS00585 8e90c1b462883cb645f19a9b1b28eacd 189 PANTHER PTHR10516 130 188 1.2E-16 T 10-11-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type CJM129_RS00585 8e90c1b462883cb645f19a9b1b28eacd 189 SUPERFAMILY SSF54534 3 140 2.75E-26 T 10-11-2016 CJM129_RS00820 de0905a29a6bf403e456129c4bcde4ab 171 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 131 166 0.009 T 10-11-2016 CJM129_RS00415 b6ea34d10d5e36fa67dd127ea023bda4 77 Pfam PF14899 Domain of unknown function (DUF4492) 12 73 8.5E-26 T 10-11-2016 IPR027853 Protein of unknown function DUF4492 CJM129_RS04410 26826ad956f211f3c759c039787f6ae1 137 Pfam PF03061 Thioesterase superfamily 22 92 5.3E-17 T 10-11-2016 IPR006683 Thioesterase domain CJM129_RS04410 26826ad956f211f3c759c039787f6ae1 137 Gene3D G3DSA:3.10.129.10 6 125 1.5E-36 T 10-11-2016 IPR029069 HotDog domain CJM129_RS04410 26826ad956f211f3c759c039787f6ae1 137 SUPERFAMILY SSF54637 6 128 2.01E-34 T 10-11-2016 IPR029069 HotDog domain CJM129_RS04410 26826ad956f211f3c759c039787f6ae1 137 PANTHER PTHR11049 5 124 8.5E-39 T 10-11-2016 CJM129_RS04410 26826ad956f211f3c759c039787f6ae1 137 PANTHER PTHR11049:SF5 5 124 8.5E-39 T 10-11-2016 CJM129_RS06840 015ec5d499024b46e038cce749a07806 388 Pfam PF05065 Phage capsid family 118 385 1.3E-63 T 10-11-2016 IPR024455 Phage capsid CJM129_RS06840 015ec5d499024b46e038cce749a07806 388 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 1 385 7.8E-92 T 10-11-2016 IPR006444 Phage major capsid protein, HK97 CJM129_RS06840 015ec5d499024b46e038cce749a07806 388 SUPERFAMILY SSF56563 110 386 5.49E-68 T 10-11-2016 CJM129_RS08530 c0e4c47f5363eb3fae40a90d154cbfe8 718 Gene3D G3DSA:2.40.170.20 160 718 6.9E-79 T 10-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJM129_RS08530 c0e4c47f5363eb3fae40a90d154cbfe8 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 157 9.6E-16 T 10-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJM129_RS08530 c0e4c47f5363eb3fae40a90d154cbfe8 718 PANTHER PTHR32552 26 426 1.7E-96 T 10-11-2016 CJM129_RS08530 c0e4c47f5363eb3fae40a90d154cbfe8 718 Gene3D G3DSA:2.170.130.10 26 159 4.5E-30 T 10-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJM129_RS08530 c0e4c47f5363eb3fae40a90d154cbfe8 718 SUPERFAMILY SSF56935 30 718 7.33E-99 T 10-11-2016 CJM129_RS08530 c0e4c47f5363eb3fae40a90d154cbfe8 718 PANTHER PTHR32552:SF0 443 718 1.7E-96 T 10-11-2016 CJM129_RS08530 c0e4c47f5363eb3fae40a90d154cbfe8 718 PANTHER PTHR32552:SF0 26 426 1.7E-96 T 10-11-2016 CJM129_RS08530 c0e4c47f5363eb3fae40a90d154cbfe8 718 Pfam PF00593 TonB dependent receptor 469 716 6.4E-23 T 10-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJM129_RS08530 c0e4c47f5363eb3fae40a90d154cbfe8 718 PANTHER PTHR32552 443 718 1.7E-96 T 10-11-2016 CJM129_RS02975 4d51c0161953075f82652fe6b01536d9 304 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 4 298 3.6E-91 T 10-11-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CJM129_RS02975 4d51c0161953075f82652fe6b01536d9 304 PANTHER PTHR30425 2 304 3.2E-83 T 10-11-2016 CJM129_RS02975 4d51c0161953075f82652fe6b01536d9 304 PANTHER PTHR30425:SF3 2 304 3.2E-83 T 10-11-2016 CJM129_RS02975 4d51c0161953075f82652fe6b01536d9 304 Gene3D G3DSA:1.10.3720.10 11 303 6.2E-37 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02975 4d51c0161953075f82652fe6b01536d9 304 SUPERFAMILY SSF161098 6 293 9.25E-29 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS02975 4d51c0161953075f82652fe6b01536d9 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 298 1.3E-17 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS05580 031a01c3b1a4b6afcc5e645b2031c99c 141 Pfam PF00583 Acetyltransferase (GNAT) family 59 129 4.0E-10 T 10-11-2016 IPR000182 GNAT domain GO:0008080 CJM129_RS05580 031a01c3b1a4b6afcc5e645b2031c99c 141 SUPERFAMILY SSF55729 7 133 1.59E-19 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS05580 031a01c3b1a4b6afcc5e645b2031c99c 141 Gene3D G3DSA:3.40.630.30 7 138 8.6E-22 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS01985 3f30e995a85e961bcc6524f3b47747df 242 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 62 215 4.0E-32 T 10-11-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 SUPERFAMILY SSF56235 27 554 1.49E-188 T 10-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 371 395 - T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 29 553 2.2E-208 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 Pfam PF01019 Gamma-glutamyltranspeptidase 44 555 1.5E-186 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 142 2.0E-76 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 371 389 2.0E-76 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 395 413 2.0E-76 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 51 76 2.0E-76 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 161 2.0E-76 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 271 290 2.0E-76 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 241 257 2.0E-76 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 436 451 2.0E-76 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 460 477 2.0E-76 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PANTHER PTHR11686:SF9 4 555 9.3E-223 T 10-11-2016 CJM129_RS00170 edde75a54ca66da1b31d864dff70f057 556 PANTHER PTHR11686 4 555 9.3E-223 T 10-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJM129_RS02830 01cbf1b00b433d496d869c615a58996f 380 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 120 374 2.6E-70 T 10-11-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 CJM129_RS02830 01cbf1b00b433d496d869c615a58996f 380 PIRSF PIRSF000501 1 380 1.8E-188 T 10-11-2016 IPR016227 Dihydropteroate synthase, predicted KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 CJM129_RS02830 01cbf1b00b433d496d869c615a58996f 380 PANTHER PTHR20941 120 380 1.4E-61 T 10-11-2016 CJM129_RS02830 01cbf1b00b433d496d869c615a58996f 380 Pfam PF00809 Pterin binding enzyme 121 360 3.3E-52 T 10-11-2016 IPR000489 Pterin-binding domain GO:0042558 CJM129_RS02830 01cbf1b00b433d496d869c615a58996f 380 Gene3D G3DSA:3.20.20.20 115 377 7.2E-73 T 10-11-2016 IPR000489 Pterin-binding domain GO:0042558 CJM129_RS02830 01cbf1b00b433d496d869c615a58996f 380 PANTHER PTHR20941:SF1 120 380 1.4E-61 T 10-11-2016 CJM129_RS02830 01cbf1b00b433d496d869c615a58996f 380 SUPERFAMILY SSF51717 110 377 5.49E-70 T 10-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 CJM129_RS02620 b2901de55da95585ce3d2ebb2238fbed 121 SUPERFAMILY SSF160214 26 120 8.11E-24 T 10-11-2016 IPR005186 FlaG protein CJM129_RS02620 b2901de55da95585ce3d2ebb2238fbed 121 Gene3D G3DSA:3.30.160.170 24 117 6.0E-24 T 10-11-2016 IPR005186 FlaG protein CJM129_RS02620 b2901de55da95585ce3d2ebb2238fbed 121 Pfam PF03646 FlaG protein 21 119 2.8E-24 T 10-11-2016 IPR005186 FlaG protein CJM129_RS03060 828a7f72be6165222dac0df8ca2b8424 360 SUPERFAMILY SSF88713 146 358 2.22E-62 T 10-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CJM129_RS03060 828a7f72be6165222dac0df8ca2b8424 360 Pfam PF04748 Divergent polysaccharide deacetylase 151 357 2.3E-63 T 10-11-2016 IPR006837 Protein of unknown function DUF610, YibQ CJM129_RS03060 828a7f72be6165222dac0df8ca2b8424 360 Gene3D G3DSA:3.20.20.370 145 358 3.0E-73 T 10-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 CJM129_RS03060 828a7f72be6165222dac0df8ca2b8424 360 PANTHER PTHR30105 147 360 1.2E-43 T 10-11-2016 CJM129_RS04815 640f24ccbb83af15fddd5d3216fa90db 421 PANTHER PTHR32479 2 404 5.5E-60 T 10-11-2016 CJM129_RS04815 640f24ccbb83af15fddd5d3216fa90db 421 Pfam PF02754 Cysteine-rich domain 177 261 4.7E-16 T 10-11-2016 IPR004017 Cysteine-rich domain CJM129_RS04815 640f24ccbb83af15fddd5d3216fa90db 421 Pfam PF02754 Cysteine-rich domain 314 397 2.8E-12 T 10-11-2016 IPR004017 Cysteine-rich domain CJM129_RS04815 640f24ccbb83af15fddd5d3216fa90db 421 PANTHER PTHR32479:SF13 2 404 5.5E-60 T 10-11-2016 CJM129_RS04815 640f24ccbb83af15fddd5d3216fa90db 421 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS04815 640f24ccbb83af15fddd5d3216fa90db 421 Gene3D G3DSA:1.10.1060.10 8 96 1.6E-16 T 10-11-2016 CJM129_RS04815 640f24ccbb83af15fddd5d3216fa90db 421 PIRSF PIRSF000139 1 421 2.0E-138 T 10-11-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit CJM129_RS04815 640f24ccbb83af15fddd5d3216fa90db 421 Pfam PF13534 4Fe-4S dicluster domain 9 75 1.2E-8 T 10-11-2016 CJM129_RS04815 640f24ccbb83af15fddd5d3216fa90db 421 SUPERFAMILY SSF46548 6 90 1.1E-15 T 10-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 CJM129_RS04825 542182c8db005886b86cf0698c09469b 163 Hamap MF_02110 UPF0763 protein . 12 159 29.433 T 10-11-2016 IPR019724 Uncharacterised protein family UPF0763 CJM129_RS04825 542182c8db005886b86cf0698c09469b 163 Pfam PF10788 Protein of unknown function (DUF2603) 15 151 7.1E-57 T 10-11-2016 IPR019724 Uncharacterised protein family UPF0763 CJM129_RS08175 bbc1ed0bb86d9578462e46eae7661e23 269 Gene3D G3DSA:3.40.190.10 27 112 4.4E-12 T 10-11-2016 CJM129_RS08175 bbc1ed0bb86d9578462e46eae7661e23 269 Gene3D G3DSA:3.40.190.10 214 251 4.4E-12 T 10-11-2016 CJM129_RS08175 bbc1ed0bb86d9578462e46eae7661e23 269 Pfam PF12849 PBP superfamily domain 16 244 2.0E-25 T 10-11-2016 IPR024370 PBP domain CJM129_RS08175 bbc1ed0bb86d9578462e46eae7661e23 269 Gene3D G3DSA:3.40.190.10 113 213 4.3E-33 T 10-11-2016 CJM129_RS08175 bbc1ed0bb86d9578462e46eae7661e23 269 PANTHER PTHR37945 4 269 2.3E-71 T 10-11-2016 CJM129_RS08175 bbc1ed0bb86d9578462e46eae7661e23 269 SUPERFAMILY SSF53850 19 253 5.38E-23 T 10-11-2016 CJM129_RS07600 2c54f0fba6e22949bcea433522400e3f 224 Pfam PF00483 Nucleotidyl transferase 3 218 3.7E-29 T 10-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 CJM129_RS07600 2c54f0fba6e22949bcea433522400e3f 224 PANTHER PTHR22572 2 215 8.9E-54 T 10-11-2016 CJM129_RS07600 2c54f0fba6e22949bcea433522400e3f 224 Gene3D G3DSA:3.90.550.10 2 217 1.7E-56 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07600 2c54f0fba6e22949bcea433522400e3f 224 SUPERFAMILY SSF53448 2 217 9.81E-55 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS00360 42648e76ddd53bf6afaed8e8cf795aef 343 SUPERFAMILY SSF56059 197 324 5.3E-16 T 10-11-2016 CJM129_RS00360 42648e76ddd53bf6afaed8e8cf795aef 343 SUPERFAMILY SSF56059 110 168 5.3E-16 T 10-11-2016 CJM129_RS04750 21cca03ee366be1fe3cb7c26724c7d8d 192 Gene3D G3DSA:3.10.129.10 28 153 1.1E-18 T 10-11-2016 IPR029069 HotDog domain CJM129_RS04750 21cca03ee366be1fe3cb7c26724c7d8d 192 SUPERFAMILY SSF54637 39 144 4.42E-13 T 10-11-2016 IPR029069 HotDog domain CJM129_RS02135 080815614eacf088c0d657b66471dec5 285 PANTHER PTHR32479:SF12 4 284 6.1E-55 T 10-11-2016 CJM129_RS02135 080815614eacf088c0d657b66471dec5 285 Pfam PF02754 Cysteine-rich domain 5 86 1.3E-11 T 10-11-2016 IPR004017 Cysteine-rich domain CJM129_RS02135 080815614eacf088c0d657b66471dec5 285 Pfam PF02754 Cysteine-rich domain 145 236 2.2E-16 T 10-11-2016 IPR004017 Cysteine-rich domain CJM129_RS02135 080815614eacf088c0d657b66471dec5 285 PANTHER PTHR32479 4 284 6.1E-55 T 10-11-2016 CJM129_RS03415 dee0ca1c72739fe79b1ddf2610d7632b 385 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 193 4.4E-31 T 10-11-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 CJM129_RS03415 dee0ca1c72739fe79b1ddf2610d7632b 385 PANTHER PTHR23417 176 339 9.5E-34 T 10-11-2016 CJM129_RS03415 dee0ca1c72739fe79b1ddf2610d7632b 385 PANTHER PTHR23417 1 126 9.5E-34 T 10-11-2016 CJM129_RS03415 dee0ca1c72739fe79b1ddf2610d7632b 385 PANTHER PTHR23417:SF2 176 339 9.5E-34 T 10-11-2016 CJM129_RS03415 dee0ca1c72739fe79b1ddf2610d7632b 385 PANTHER PTHR23417:SF2 1 126 9.5E-34 T 10-11-2016 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 63 83 7.0E-66 T 10-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 44 63 7.0E-66 T 10-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 83 102 7.0E-66 T 10-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 241 7.0E-66 T 10-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 191 7.0E-66 T 10-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 192 213 7.0E-66 T 10-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 219 231 - T 10-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PANTHER PTHR30587 2 244 2.4E-113 T 10-11-2016 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 171 186 - T 10-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 128 6.1E-22 T 10-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 142 154 6.1E-22 T 10-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 232 242 6.1E-22 T 10-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 42 51 6.1E-22 T 10-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 102 114 6.1E-22 T 10-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 164 176 6.1E-22 T 10-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 46 242 1.1E-86 T 10-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 Pfam PF00813 FliP family 46 238 4.3E-81 T 10-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJM129_RS03960 6746cbad096213d85b8e1f47db172f5a 244 PANTHER PTHR30587:SF0 2 244 2.4E-113 T 10-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJM129_RS08060 cc9af89a10c33d67ab05c921cc762e71 73 Pfam PF02597 ThiS family 5 73 1.6E-12 T 10-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CJM129_RS08060 cc9af89a10c33d67ab05c921cc762e71 73 Gene3D G3DSA:3.10.20.30 10 73 8.5E-12 T 10-11-2016 IPR012675 Beta-grasp domain CJM129_RS08060 cc9af89a10c33d67ab05c921cc762e71 73 SUPERFAMILY SSF54285 1 73 3.34E-12 T 10-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CJM129_RS00865 20619dba2d5b91859418fd637719f7eb 120 SUPERFAMILY SSF53335 2 100 6.01E-5 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00865 20619dba2d5b91859418fd637719f7eb 120 Gene3D G3DSA:3.40.50.150 2 45 4.4E-4 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07005 6f74265b28e9c0e46c14769c747b0e3b 138 SUPERFAMILY SSF54593 6 137 1.19E-14 T 10-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJM129_RS07005 6f74265b28e9c0e46c14769c747b0e3b 138 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 106 8.9E-10 T 10-11-2016 CJM129_RS07005 6f74265b28e9c0e46c14769c747b0e3b 138 Gene3D G3DSA:3.10.180.10 10 136 1.9E-21 T 10-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJM129_RS04020 66eb6d697e963d8bcfa3d6654d7e95f6 577 Pfam PF03553 Na+/H+ antiporter family 199 542 8.3E-59 T 10-11-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 CJM129_RS04020 66eb6d697e963d8bcfa3d6654d7e95f6 577 PANTHER PTHR33451:SF7 29 574 3.4E-167 T 10-11-2016 CJM129_RS04020 66eb6d697e963d8bcfa3d6654d7e95f6 577 PANTHER PTHR33451 29 574 3.4E-167 T 10-11-2016 CJM129_RS02965 ea6789ca57cd81f6e9c8e060bdeb7f3c 167 Pfam PF00210 Ferritin-like domain 8 144 1.2E-37 T 10-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CJM129_RS02965 ea6789ca57cd81f6e9c8e060bdeb7f3c 167 Gene3D G3DSA:1.20.1260.10 1 162 1.0E-60 T 10-11-2016 IPR012347 Ferritin-related CJM129_RS02965 ea6789ca57cd81f6e9c8e060bdeb7f3c 167 PANTHER PTHR11431 3 156 5.3E-41 T 10-11-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 CJM129_RS02965 ea6789ca57cd81f6e9c8e060bdeb7f3c 167 SUPERFAMILY SSF47240 1 159 2.42E-55 T 10-11-2016 IPR009078 Ferritin-like superfamily CJM129_RS02770 e8c562456011dd4da26e2f5daf216af4 147 Gene3D G3DSA:1.10.1510.10 1 90 5.6E-27 T 10-11-2016 CJM129_RS02770 e8c562456011dd4da26e2f5daf216af4 147 PANTHER PTHR28055:SF1 1 146 7.3E-40 T 10-11-2016 CJM129_RS02770 e8c562456011dd4da26e2f5daf216af4 147 Pfam PF09424 Yqey-like protein 4 146 6.0E-40 T 10-11-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial CJM129_RS02770 e8c562456011dd4da26e2f5daf216af4 147 SUPERFAMILY SSF89095 1 147 2.56E-32 T 10-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CJM129_RS02770 e8c562456011dd4da26e2f5daf216af4 147 Gene3D G3DSA:1.10.10.410 91 147 6.8E-14 T 10-11-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CJM129_RS02770 e8c562456011dd4da26e2f5daf216af4 147 PANTHER PTHR28055 1 146 7.3E-40 T 10-11-2016 CJM129_RS09120 2d7da6f4a270af4fb12db01f80879e1b 178 Gene3D G3DSA:3.40.50.1580 16 174 4.6E-11 T 10-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJM129_RS09120 2d7da6f4a270af4fb12db01f80879e1b 178 SUPERFAMILY SSF53167 3 173 5.5E-20 T 10-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJM129_RS03860 0d6f028a53bed786d0411673cf1b27cb 239 SUPERFAMILY SSF53474 8 238 1.5E-28 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS03860 0d6f028a53bed786d0411673cf1b27cb 239 Pfam PF12697 Alpha/beta hydrolase family 28 141 1.6E-6 T 10-11-2016 IPR000073 Alpha/beta hydrolase fold-1 CJM129_RS03860 0d6f028a53bed786d0411673cf1b27cb 239 PANTHER PTHR10992 13 239 8.8E-18 T 10-11-2016 CJM129_RS03860 0d6f028a53bed786d0411673cf1b27cb 239 Gene3D G3DSA:3.40.50.1820 11 238 1.5E-29 T 10-11-2016 IPR029058 Alpha/Beta hydrolase fold CJM129_RS05545 9190d318aad568837c85d859a53c21f9 258 Gene3D G3DSA:3.60.110.10 2 251 5.1E-42 T 10-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJM129_RS05545 9190d318aad568837c85d859a53c21f9 258 SUPERFAMILY SSF56317 3 249 5.23E-36 T 10-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJM129_RS05545 9190d318aad568837c85d859a53c21f9 258 Pfam PF00795 Carbon-nitrogen hydrolase 22 237 1.1E-10 T 10-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJM129_RS05545 9190d318aad568837c85d859a53c21f9 258 PANTHER PTHR23088 3 251 3.1E-15 T 10-11-2016 CJM129_RS04880 41657eaf3b0187f3180947cb8d1ab96d 138 SUPERFAMILY SSF160574 17 135 3.53E-31 T 10-11-2016 CJM129_RS04880 41657eaf3b0187f3180947cb8d1ab96d 138 Pfam PF11396 Putative beta-lactamase-inhibitor-like, PepSY-like 52 132 2.5E-22 T 10-11-2016 IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like CJM129_RS06075 cf654a8fbaabddac622cfb267f1502b9 164 Pfam PF12821 Threonine/Serine exporter, ThrE 8 148 8.9E-33 T 10-11-2016 IPR024528 Threonine/Serine exporter, ThrE CJM129_RS06075 cf654a8fbaabddac622cfb267f1502b9 164 PANTHER PTHR34390 1 159 6.0E-25 T 10-11-2016 CJM129_RS01625 4855fdfeff52f5f01a7444ee929d4c37 147 PANTHER PTHR30353:SF12 5 143 1.9E-23 T 10-11-2016 CJM129_RS01625 4855fdfeff52f5f01a7444ee929d4c37 147 PANTHER PTHR30353 5 143 1.9E-23 T 10-11-2016 IPR032818 DedA family CJM129_RS05990 24d224d6971c7866ed94b38b3540a55b 319 PANTHER PTHR30160 1 314 9.7E-42 T 10-11-2016 CJM129_RS05990 24d224d6971c7866ed94b38b3540a55b 319 Gene3D G3DSA:3.40.50.2000 1 106 5.1E-11 T 10-11-2016 CJM129_RS05990 24d224d6971c7866ed94b38b3540a55b 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 96 294 1.6E-36 T 10-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CJM129_RS05990 24d224d6971c7866ed94b38b3540a55b 319 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 142 314 8.1E-41 T 10-11-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 CJM129_RS05990 24d224d6971c7866ed94b38b3540a55b 319 Gene3D G3DSA:3.40.50.2000 142 316 3.1E-53 T 10-11-2016 CJM129_RS05990 24d224d6971c7866ed94b38b3540a55b 319 PANTHER PTHR30160:SF7 1 314 9.7E-42 T 10-11-2016 CJM129_RS05990 24d224d6971c7866ed94b38b3540a55b 319 SUPERFAMILY SSF53756 1 316 1.04E-68 T 10-11-2016 CJM129_RS01940 9919af73dc8ab589a2e97ed94590661f 262 Gene3D G3DSA:3.40.50.720 104 259 4.7E-37 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS01940 9919af73dc8ab589a2e97ed94590661f 262 Gene3D G3DSA:3.40.192.10 2 103 2.4E-33 T 10-11-2016 CJM129_RS01940 9919af73dc8ab589a2e97ed94590661f 262 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 259 1.4E-63 T 10-11-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS01940 9919af73dc8ab589a2e97ed94590661f 262 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 257 27.788 T 10-11-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS01940 9919af73dc8ab589a2e97ed94590661f 262 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 113 177 7.7E-7 T 10-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CJM129_RS01940 9919af73dc8ab589a2e97ed94590661f 262 PANTHER PTHR21089 1 260 1.4E-61 T 10-11-2016 CJM129_RS01940 9919af73dc8ab589a2e97ed94590661f 262 SUPERFAMILY SSF53223 2 98 8.63E-28 T 10-11-2016 CJM129_RS01940 9919af73dc8ab589a2e97ed94590661f 262 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 86 1.9E-21 T 10-11-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 CJM129_RS01940 9919af73dc8ab589a2e97ed94590661f 262 SUPERFAMILY SSF51735 99 258 4.69E-30 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS03385 90069ef12199232464d7c43e421f5b02 417 Pfam PF01136 Peptidase family U32 77 306 2.3E-82 T 10-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CJM129_RS03385 90069ef12199232464d7c43e421f5b02 417 PANTHER PTHR30217 1 321 2.1E-117 T 10-11-2016 CJM129_RS03385 90069ef12199232464d7c43e421f5b02 417 SUPERFAMILY SSF51412 13 145 6.68E-6 T 10-11-2016 CJM129_RS03385 90069ef12199232464d7c43e421f5b02 417 PANTHER PTHR30217:SF6 1 321 2.1E-117 T 10-11-2016 CJM129_RS03385 90069ef12199232464d7c43e421f5b02 417 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 10-11-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CJM129_RS03465 24a42090805e57939f5661036138565f 109 PANTHER PTHR30041:SF3 1 109 1.2E-13 T 10-11-2016 CJM129_RS03465 24a42090805e57939f5661036138565f 109 PANTHER PTHR30041 1 109 1.2E-13 T 10-11-2016 CJM129_RS03465 24a42090805e57939f5661036138565f 109 Gene3D G3DSA:3.40.30.10 1 104 4.1E-25 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS03465 24a42090805e57939f5661036138565f 109 Pfam PF03960 ArsC family 4 104 1.4E-10 T 10-11-2016 IPR006660 Arsenate reductase-like CJM129_RS03465 24a42090805e57939f5661036138565f 109 SUPERFAMILY SSF52833 1 104 1.65E-21 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS04915 3be8022e8929422ad81362eb40966f94 255 PANTHER PTHR21535 57 235 8.8E-15 T 10-11-2016 CJM129_RS04915 3be8022e8929422ad81362eb40966f94 255 Gene3D G3DSA:1.20.58.340 167 237 1.7E-17 T 10-11-2016 CJM129_RS04915 3be8022e8929422ad81362eb40966f94 255 Pfam PF01544 CorA-like Mg2+ transporter protein 61 238 1.2E-23 T 10-11-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CJM129_RS04915 3be8022e8929422ad81362eb40966f94 255 SUPERFAMILY SSF144083 175 237 5.49E-14 T 10-11-2016 CJM129_RS00570 471c301d4ba7ad39a9ddea507bcb5ba3 402 SUPERFAMILY SSF69304 142 402 2.88E-36 T 10-11-2016 CJM129_RS00570 471c301d4ba7ad39a9ddea507bcb5ba3 402 Gene3D G3DSA:2.130.10.10 141 383 2.6E-39 T 10-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJM129_RS00570 471c301d4ba7ad39a9ddea507bcb5ba3 402 Hamap MF_00671 Protein TolB [tolB]. 1 402 24.444 T 10-11-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CJM129_RS00570 471c301d4ba7ad39a9ddea507bcb5ba3 402 Pfam PF07676 WD40-like Beta Propeller Repeat 255 291 0.27 T 10-11-2016 IPR011659 WD40-like Beta Propeller CJM129_RS06900 f5b0e55878454e1444f4bed9f9fbe870 541 PANTHER PTHR41287 2 541 3.2E-96 T 10-11-2016 CJM129_RS06900 f5b0e55878454e1444f4bed9f9fbe870 541 Pfam PF03354 Phage Terminase 80 521 2.7E-80 T 10-11-2016 IPR005021 Phage terminase CJM129_RS08500 d35f18c03549ac0666469e91b9f5fe1e 295 SUPERFAMILY SSF52172 1 127 1.15E-14 T 10-11-2016 IPR011006 CheY-like superfamily CJM129_RS08500 d35f18c03549ac0666469e91b9f5fe1e 295 PIRSF PIRSF016788 1 295 9.9E-150 T 10-11-2016 IPR014483 Fis-like DNA-binding domain-containing signal transduction response regulator, predicted CJM129_RS08500 d35f18c03549ac0666469e91b9f5fe1e 295 Gene3D G3DSA:3.40.50.2300 1 108 1.4E-10 T 10-11-2016 CJM129_RS02435 96c8786d99c16ad8a8489d4560bac6d9 183 Pfam PF02545 Maf-like protein 2 183 8.4E-27 T 10-11-2016 IPR003697 Maf-like protein GO:0005737 CJM129_RS02435 96c8786d99c16ad8a8489d4560bac6d9 183 SUPERFAMILY SSF52972 1 183 1.11E-39 T 10-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CJM129_RS02435 96c8786d99c16ad8a8489d4560bac6d9 183 Hamap MF_00528 Septum formation protein Maf [maf]. 1 183 20.798 T 10-11-2016 IPR003697 Maf-like protein GO:0005737 CJM129_RS02435 96c8786d99c16ad8a8489d4560bac6d9 183 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 180 1.2E-35 T 10-11-2016 IPR003697 Maf-like protein GO:0005737 CJM129_RS02435 96c8786d99c16ad8a8489d4560bac6d9 183 Gene3D G3DSA:3.90.950.10 2 182 3.3E-36 T 10-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like CJM129_RS02435 96c8786d99c16ad8a8489d4560bac6d9 183 PIRSF PIRSF006305 1 183 6.5E-43 T 10-11-2016 IPR003697 Maf-like protein GO:0005737 CJM129_RS01280 70a09535da279183bf8f7b427aa11afc 176 Pfam PF09624 Protein of unknown function (DUF2393) 30 176 2.0E-34 T 10-11-2016 IPR013417 Conserved hypothetical protein CHP02588 CJM129_RS02825 13b6e3f86649fd8dccd9a1a88f0f1141 199 Pfam PF13177 DNA polymerase III, delta subunit 42 105 4.0E-12 T 10-11-2016 CJM129_RS02825 13b6e3f86649fd8dccd9a1a88f0f1141 199 Gene3D G3DSA:3.40.50.300 34 105 6.4E-14 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS02825 13b6e3f86649fd8dccd9a1a88f0f1141 199 SUPERFAMILY SSF52540 38 129 2.49E-12 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06185 37a114743407e9cef99c8324251d3e0c 428 PANTHER PTHR10283:SF21 1 428 1.7E-62 T 10-11-2016 CJM129_RS06185 37a114743407e9cef99c8324251d3e0c 428 Pfam PF02040 Arsenical pump membrane protein 2 426 6.2E-72 T 10-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJM129_RS06185 37a114743407e9cef99c8324251d3e0c 428 PRINTS PR00758 Arsenical pump membrane protein signature 285 309 3.0E-47 T 10-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJM129_RS06185 37a114743407e9cef99c8324251d3e0c 428 PRINTS PR00758 Arsenical pump membrane protein signature 187 210 3.0E-47 T 10-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJM129_RS06185 37a114743407e9cef99c8324251d3e0c 428 PRINTS PR00758 Arsenical pump membrane protein signature 402 426 3.0E-47 T 10-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJM129_RS06185 37a114743407e9cef99c8324251d3e0c 428 PRINTS PR00758 Arsenical pump membrane protein signature 328 350 3.0E-47 T 10-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJM129_RS06185 37a114743407e9cef99c8324251d3e0c 428 PRINTS PR00758 Arsenical pump membrane protein signature 108 132 3.0E-47 T 10-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJM129_RS06185 37a114743407e9cef99c8324251d3e0c 428 PRINTS PR00758 Arsenical pump membrane protein signature 369 394 3.0E-47 T 10-11-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJM129_RS06185 37a114743407e9cef99c8324251d3e0c 428 PANTHER PTHR10283 1 428 1.7E-62 T 10-11-2016 CJM129_RS03115 976f1edfafda1dbfbe25e9126d201351 271 PANTHER PTHR10060 1 271 6.3E-97 T 10-11-2016 IPR001130 TatD family GO:0016788 CJM129_RS03115 976f1edfafda1dbfbe25e9126d201351 271 SUPERFAMILY SSF51556 13 268 1.94E-83 T 10-11-2016 IPR032466 Metal-dependent hydrolase CJM129_RS03115 976f1edfafda1dbfbe25e9126d201351 271 Pfam PF01026 TatD related DNase 14 267 1.3E-73 T 10-11-2016 IPR001130 TatD family GO:0016788 CJM129_RS03115 976f1edfafda1dbfbe25e9126d201351 271 Gene3D G3DSA:3.20.20.140 9 267 4.6E-87 T 10-11-2016 CJM129_RS03115 976f1edfafda1dbfbe25e9126d201351 271 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 13 21 - T 10-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CJM129_RS03115 976f1edfafda1dbfbe25e9126d201351 271 PIRSF PIRSF005902 5 270 3.5E-76 T 10-11-2016 IPR001130 TatD family GO:0016788 CJM129_RS03115 976f1edfafda1dbfbe25e9126d201351 271 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 13 267 8.4E-77 T 10-11-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 CJM129_RS04975 323231079796bd337cff1a49afdf4c99 415 Pfam PF07916 TraG-like protein, N-terminal region 26 410 1.2E-42 T 10-11-2016 IPR012931 TraG-like, N-terminal CJM129_RS08245 ad5b5ee1b2b8fe75d48e08385ff410e4 211 Pfam PF13460 NAD(P)H-binding 8 198 2.7E-15 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS08245 ad5b5ee1b2b8fe75d48e08385ff410e4 211 PANTHER PTHR15020:SF29 1 210 3.2E-45 T 10-11-2016 CJM129_RS08245 ad5b5ee1b2b8fe75d48e08385ff410e4 211 SUPERFAMILY SSF51735 1 208 2.1E-20 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS08245 ad5b5ee1b2b8fe75d48e08385ff410e4 211 Gene3D G3DSA:3.40.50.720 1 209 5.8E-18 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS08245 ad5b5ee1b2b8fe75d48e08385ff410e4 211 PANTHER PTHR15020 1 210 3.2E-45 T 10-11-2016 CJM129_RS07020 d64d882c767f097ed1088c3d1adde1f5 73 Gene3D G3DSA:1.10.1200.10 5 69 2.9E-6 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS07020 d64d882c767f097ed1088c3d1adde1f5 73 SUPERFAMILY SSF47336 10 68 8.78E-7 T 10-11-2016 IPR009081 Phosphopantetheine binding ACP domain CJM129_RS01685 742354acee19682e7938f42cd18be2e2 486 Pfam PF02541 Ppx/GppA phosphatase family 18 298 1.0E-50 T 10-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 CJM129_RS01685 742354acee19682e7938f42cd18be2e2 486 SUPERFAMILY SSF53067 130 297 2.71E-33 T 10-11-2016 CJM129_RS01685 742354acee19682e7938f42cd18be2e2 486 Gene3D G3DSA:3.30.420.40 3 125 4.3E-33 T 10-11-2016 CJM129_RS01685 742354acee19682e7938f42cd18be2e2 486 SUPERFAMILY SSF53067 5 127 1.3E-31 T 10-11-2016 CJM129_RS01685 742354acee19682e7938f42cd18be2e2 486 SUPERFAMILY SSF109604 318 472 4.71E-23 T 10-11-2016 CJM129_RS01685 742354acee19682e7938f42cd18be2e2 486 Gene3D G3DSA:3.30.420.150 132 299 3.7E-32 T 10-11-2016 CJM129_RS01685 742354acee19682e7938f42cd18be2e2 486 PANTHER PTHR30005 6 406 1.4E-68 T 10-11-2016 CJM129_RS03225 9369740e73d951a613b00a9a61bf83d6 81 PIRSF PIRSF038881 1 80 2.9E-22 T 10-11-2016 IPR025490 RNA-binding protein, HP1423 type CJM129_RS03225 9369740e73d951a613b00a9a61bf83d6 81 Gene3D G3DSA:3.10.290.10 1 77 2.2E-20 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS03225 9369740e73d951a613b00a9a61bf83d6 81 Pfam PF01479 S4 domain 1 47 1.7E-6 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS03225 9369740e73d951a613b00a9a61bf83d6 81 SUPERFAMILY SSF55174 1 77 1.57E-18 T 10-11-2016 CJM129_RS03225 9369740e73d951a613b00a9a61bf83d6 81 SMART SM00363 1 66 8.6E-5 T 10-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 CJM129_RS07470 84319113b32dce4a798bd8c32e62fb0b 74 SMART SM00899 1 73 7.0E-13 T 10-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CJM129_RS07470 84319113b32dce4a798bd8c32e62fb0b 74 SUPERFAMILY SSF50037 3 72 9.16E-12 T 10-11-2016 IPR008988 Transcriptional repressor, C-terminal CJM129_RS07470 84319113b32dce4a798bd8c32e62fb0b 74 Pfam PF04023 FeoA domain 1 72 1.0E-13 T 10-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CJM129_RS08545 d0cf21aadd80a3b3f791bcc9a61dbc15 268 PANTHER PTHR30535 19 259 3.4E-32 T 10-11-2016 CJM129_RS08545 d0cf21aadd80a3b3f791bcc9a61dbc15 268 SUPERFAMILY SSF53807 19 244 1.26E-48 T 10-11-2016 CJM129_RS08545 d0cf21aadd80a3b3f791bcc9a61dbc15 268 Gene3D G3DSA:3.40.50.1980 133 263 7.7E-20 T 10-11-2016 CJM129_RS08545 d0cf21aadd80a3b3f791bcc9a61dbc15 268 Gene3D G3DSA:3.40.50.1980 19 132 4.1E-23 T 10-11-2016 CJM129_RS08545 d0cf21aadd80a3b3f791bcc9a61dbc15 268 Pfam PF01497 Periplasmic binding protein 22 239 1.2E-33 T 10-11-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CJM129_RS08545 d0cf21aadd80a3b3f791bcc9a61dbc15 268 PANTHER PTHR30535:SF5 19 259 3.4E-32 T 10-11-2016 CJM129_RS02955 bba14ca8837de80375de45547321c050 336 SUPERFAMILY SSF52266 123 328 1.13E-20 T 10-11-2016 IPR013830 SGNH hydrolase-type esterase domain CJM129_RS02955 bba14ca8837de80375de45547321c050 336 Gene3D G3DSA:3.40.50.1110 125 328 9.3E-19 T 10-11-2016 IPR013830 SGNH hydrolase-type esterase domain CJM129_RS02955 bba14ca8837de80375de45547321c050 336 Pfam PF04311 Protein of unknown function (DUF459) 127 320 1.1E-21 T 10-11-2016 IPR007407 Protein of unknown function DUF459 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 Gene3D G3DSA:3.30.160.20 207 282 1.9E-33 T 10-11-2016 IPR014720 Double-stranded RNA-binding domain CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 SMART SM00937 60 175 1.9E-58 T 10-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 SUPERFAMILY SSF75620 10 350 2.35E-132 T 10-11-2016 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 Pfam PF03462 PCRF domain 11 200 3.0E-69 T 10-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 Pfam PF00472 RF-1 domain 208 317 5.9E-42 T 10-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 352 8.8E-162 T 10-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 Gene3D G3DSA:1.20.58.410 5 90 7.4E-16 T 10-11-2016 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 PANTHER PTHR11075:SF9 1 353 4.1E-162 T 10-11-2016 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 PANTHER PTHR11075 1 353 4.1E-162 T 10-11-2016 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 354 39.698 T 10-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CJM129_RS08520 e877baedaaf2529cf521b1e0bbb82857 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 10-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJM129_RS01535 1288f581461603bb6d210439cdd8a557 398 Gene3D G3DSA:2.40.320.10 1 136 1.8E-8 T 10-11-2016 IPR023577 CYTH domain CJM129_RS07890 3a1d04d299e732ef1e9181cfe9d81fa4 173 Pfam PF05751 FixH 6 154 1.0E-13 T 10-11-2016 IPR008620 Nitrogen fixation protein FixH CJM129_RS03520 4b7e8e5c274b315a39814e2d238ccc6b 441 Pfam PF13449 Esterase-like activity of phytase 82 413 4.4E-60 T 10-11-2016 IPR027372 Phytase-like domain CJM129_RS03520 4b7e8e5c274b315a39814e2d238ccc6b 441 PANTHER PTHR37957 4 438 6.9E-105 T 10-11-2016 CJM129_RS07960 4ab77381a70cd8516b39dece8913586c 142 Pfam PF02050 Flagellar FliJ protein 17 135 2.3E-17 T 10-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CJM129_RS07885 f0d8f12712df144656c89454103d49b9 788 Pfam PF12705 PD-(D/E)XK nuclease superfamily 561 780 9.6E-24 T 10-11-2016 CJM129_RS07885 f0d8f12712df144656c89454103d49b9 788 Gene3D G3DSA:3.40.50.300 424 486 1.6E-6 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07885 f0d8f12712df144656c89454103d49b9 788 Gene3D G3DSA:3.40.50.300 230 311 1.6E-6 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07885 f0d8f12712df144656c89454103d49b9 788 SUPERFAMILY SSF52980 562 722 3.43E-9 T 10-11-2016 IPR011335 Restriction endonuclease type II-like CJM129_RS07885 f0d8f12712df144656c89454103d49b9 788 SUPERFAMILY SSF52540 241 547 4.99E-23 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00135 5b4c9099c3061dd8ccebe2fb53198514 523 Gene3D G3DSA:3.40.50.2300 99 141 3.4E-4 T 10-11-2016 CJM129_RS00135 5b4c9099c3061dd8ccebe2fb53198514 523 PANTHER PTHR30255 14 522 1.6E-158 T 10-11-2016 CJM129_RS00135 5b4c9099c3061dd8ccebe2fb53198514 523 SUPERFAMILY SSF64182 29 410 2.09E-108 T 10-11-2016 CJM129_RS00135 5b4c9099c3061dd8ccebe2fb53198514 523 PANTHER PTHR30255:SF2 14 522 1.6E-158 T 10-11-2016 CJM129_RS00135 5b4c9099c3061dd8ccebe2fb53198514 523 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 9 521 2.5E-179 T 10-11-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CJM129_RS00135 5b4c9099c3061dd8ccebe2fb53198514 523 Pfam PF02272 DHHA1 domain 338 401 3.2E-12 T 10-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 CJM129_RS00135 5b4c9099c3061dd8ccebe2fb53198514 523 Pfam PF01368 DHH family 54 183 1.7E-12 T 10-11-2016 IPR001667 DDH domain CJM129_RS08195 aae6e79fe426ea5f8bc7c39e670a3c85 298 PANTHER PTHR12715 8 297 2.2E-28 T 10-11-2016 CJM129_RS08195 aae6e79fe426ea5f8bc7c39e670a3c85 298 Pfam PF00892 EamA-like transporter family 8 109 9.6E-12 T 10-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CJM129_RS08195 aae6e79fe426ea5f8bc7c39e670a3c85 298 Pfam PF00892 EamA-like transporter family 160 292 3.4E-16 T 10-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 CJM129_RS08195 aae6e79fe426ea5f8bc7c39e670a3c85 298 SUPERFAMILY SSF103481 199 296 4.71E-10 T 10-11-2016 CJM129_RS02670 1b033852c7e02c94d6f3a197d162d1b6 265 SUPERFAMILY SSF51556 3 265 1.87E-45 T 10-11-2016 IPR032466 Metal-dependent hydrolase CJM129_RS02670 1b033852c7e02c94d6f3a197d162d1b6 265 PANTHER PTHR35563:SF1 3 265 5.0E-25 T 10-11-2016 CJM129_RS02670 1b033852c7e02c94d6f3a197d162d1b6 265 Pfam PF04909 Amidohydrolase 3 265 1.1E-22 T 10-11-2016 IPR006680 Amidohydrolase-related GO:0016787 CJM129_RS02670 1b033852c7e02c94d6f3a197d162d1b6 265 PANTHER PTHR35563 3 265 5.0E-25 T 10-11-2016 CJM129_RS02670 1b033852c7e02c94d6f3a197d162d1b6 265 Gene3D G3DSA:3.20.20.140 2 265 1.1E-53 T 10-11-2016 CJM129_RS02215 587fb53ed7a609a33de97cc13cff74f2 209 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 32 127 1.0E-51 T 10-11-2016 IPR007172 Domain of unknown function DUF374 CJM129_RS02215 587fb53ed7a609a33de97cc13cff74f2 209 Pfam PF04028 Domain of unknown function (DUF374) 58 125 1.7E-27 T 10-11-2016 IPR007172 Domain of unknown function DUF374 CJM129_RS04415 cf2c67a50577f5548891a1c6ccabd88a 65 Pfam PF04328 Protein of unknown function (DUF466) 7 65 4.7E-18 T 10-11-2016 IPR007423 Protein of unknown function DUF466 CJM129_RS04525 dd4742008bace97eed301547da578f33 303 PANTHER PTHR36838:SF1 1 302 2.1E-43 T 10-11-2016 CJM129_RS04525 dd4742008bace97eed301547da578f33 303 PANTHER PTHR36838 1 302 2.1E-43 T 10-11-2016 CJM129_RS04525 dd4742008bace97eed301547da578f33 303 Pfam PF03547 Membrane transport protein 159 298 1.8E-11 T 10-11-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CJM129_RS04525 dd4742008bace97eed301547da578f33 303 Pfam PF03547 Membrane transport protein 3 126 5.5E-13 T 10-11-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 CJM129_RS02800 3d783b7112ed62a87a8f4a22220eeeb0 135 Pfam PF02416 mttA/Hcf106 family 1 46 9.2E-7 T 10-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CJM129_RS02800 3d783b7112ed62a87a8f4a22220eeeb0 135 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 72 1.4E-18 T 10-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CJM129_RS02800 3d783b7112ed62a87a8f4a22220eeeb0 135 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 134 13.719 T 10-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CJM129_RS03015 8df4d84fc57f1eca747cb1fddc7fc773 247 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 62 223 2.2E-31 T 10-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CJM129_RS03015 8df4d84fc57f1eca747cb1fddc7fc773 247 SUPERFAMILY SSF52540 28 240 6.48E-39 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03015 8df4d84fc57f1eca747cb1fddc7fc773 247 PIRSF PIRSF005624 26 246 2.2E-92 T 10-11-2016 CJM129_RS03015 8df4d84fc57f1eca747cb1fddc7fc773 247 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 35 244 7.3E-88 T 10-11-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CJM129_RS03015 8df4d84fc57f1eca747cb1fddc7fc773 247 Gene3D G3DSA:3.40.50.300 69 235 1.2E-15 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS03015 8df4d84fc57f1eca747cb1fddc7fc773 247 PANTHER PTHR30134 1 243 5.2E-125 T 10-11-2016 CJM129_RS03015 8df4d84fc57f1eca747cb1fddc7fc773 247 PANTHER PTHR30134:SF0 1 243 5.2E-125 T 10-11-2016 CJM129_RS02560 0d2b2f0f6faafb8e0d7f4f02469ef690 103 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS02560 0d2b2f0f6faafb8e0d7f4f02469ef690 103 Pfam PF12838 4Fe-4S dicluster domain 17 66 8.1E-10 T 10-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJM129_RS02560 0d2b2f0f6faafb8e0d7f4f02469ef690 103 Gene3D G3DSA:3.30.70.20 11 79 1.5E-15 T 10-11-2016 CJM129_RS02560 0d2b2f0f6faafb8e0d7f4f02469ef690 103 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 18 29 - T 10-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJM129_RS02560 0d2b2f0f6faafb8e0d7f4f02469ef690 103 SUPERFAMILY SSF54862 10 89 2.57E-17 T 10-11-2016 CJM129_RS05375 a8b7cb41514dbfb0ce9f8a9765e4eb49 168 Pfam PF03350 Uncharacterized protein family, UPF0114 10 134 5.8E-33 T 10-11-2016 IPR005134 Uncharacterised protein family UPF0114 CJM129_RS05375 a8b7cb41514dbfb0ce9f8a9765e4eb49 168 PIRSF PIRSF026509 1 168 6.1E-55 T 10-11-2016 IPR005134 Uncharacterised protein family UPF0114 CJM129_RS05375 a8b7cb41514dbfb0ce9f8a9765e4eb49 168 PANTHER PTHR31721 1 165 5.4E-27 T 10-11-2016 CJM129_RS08225 212b0e9ac75af16d36fbeb44487a27b6 555 PANTHER PTHR35149 1 554 4.9E-71 T 10-11-2016 CJM129_RS08225 212b0e9ac75af16d36fbeb44487a27b6 555 Pfam PF03235 Protein of unknown function DUF262 13 241 1.6E-40 T 10-11-2016 IPR004919 Domain of unknown function DUF262 CJM129_RS08225 212b0e9ac75af16d36fbeb44487a27b6 555 PANTHER PTHR35149:SF2 1 554 4.9E-71 T 10-11-2016 CJM129_RS08225 212b0e9ac75af16d36fbeb44487a27b6 555 Pfam PF07510 Protein of unknown function (DUF1524) 425 546 5.3E-17 T 10-11-2016 IPR011089 Domain of unknown function DUF1524 CJM129_RS07145 7a093a5c636a496c84f1fe60edf00346 235 PANTHER PTHR21485:SF20 2 227 1.8E-43 T 10-11-2016 CJM129_RS07145 7a093a5c636a496c84f1fe60edf00346 235 Gene3D G3DSA:3.90.550.10 3 227 2.1E-56 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07145 7a093a5c636a496c84f1fe60edf00346 235 Pfam PF02348 Cytidylyltransferase 7 203 6.4E-24 T 10-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 CJM129_RS07145 7a093a5c636a496c84f1fe60edf00346 235 SUPERFAMILY SSF53448 3 226 1.37E-46 T 10-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases CJM129_RS07145 7a093a5c636a496c84f1fe60edf00346 235 PANTHER PTHR21485 2 227 1.8E-43 T 10-11-2016 CJM129_RS03020 aafc3448c066c702ac4bacb59a5a83bd 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.0E-12 T 10-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CJM129_RS03020 aafc3448c066c702ac4bacb59a5a83bd 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 1.0E-12 T 10-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CJM129_RS03020 aafc3448c066c702ac4bacb59a5a83bd 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 1.0E-12 T 10-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CJM129_RS03020 aafc3448c066c702ac4bacb59a5a83bd 93 PANTHER PTHR35177 1 90 2.1E-24 T 10-11-2016 CJM129_RS03020 aafc3448c066c702ac4bacb59a5a83bd 93 SUPERFAMILY SSF159127 1 78 7.46E-24 T 10-11-2016 CJM129_RS03020 aafc3448c066c702ac4bacb59a5a83bd 93 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 2.9E-24 T 10-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CJM129_RS03020 aafc3448c066c702ac4bacb59a5a83bd 93 Pfam PF01455 HupF/HypC family 1 66 9.1E-24 T 10-11-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CJM129_RS03020 aafc3448c066c702ac4bacb59a5a83bd 93 PANTHER PTHR35177:SF2 1 90 2.1E-24 T 10-11-2016 CJM129_RS00650 32d9fbb0fa6da75004470766bbf43d05 240 SUPERFAMILY SSF56655 1 238 4.45E-29 T 10-11-2016 CJM129_RS00650 32d9fbb0fa6da75004470766bbf43d05 240 Gene3D G3DSA:3.30.540.10 2 130 1.8E-19 T 10-11-2016 CJM129_RS00650 32d9fbb0fa6da75004470766bbf43d05 240 Pfam PF00459 Inositol monophosphatase family 60 208 1.7E-14 T 10-11-2016 IPR000760 Inositol monophosphatase GO:0046854 CJM129_RS07800 03636859570671fdbf5ea6723043f821 65 Pfam PF04316 Anti-sigma-28 factor, FlgM 27 62 1.0E-5 T 10-11-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CJM129_RS07800 03636859570671fdbf5ea6723043f821 65 SUPERFAMILY SSF101498 13 63 6.28E-7 T 10-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CJM129_RS08745 b7fa01cdee98a7844c90e516837d995a 152 SUPERFAMILY SSF54001 28 152 1.41E-38 T 10-11-2016 CJM129_RS08745 b7fa01cdee98a7844c90e516837d995a 152 Gene3D G3DSA:3.90.1720.10 28 152 5.5E-40 T 10-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CJM129_RS08745 b7fa01cdee98a7844c90e516837d995a 152 PANTHER PTHR21666 41 152 2.6E-31 T 10-11-2016 CJM129_RS08745 b7fa01cdee98a7844c90e516837d995a 152 Pfam PF00877 NlpC/P60 family 47 151 1.8E-28 T 10-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- CJM129_RS02820 2f1ebe7c655f439a81944128547cb4c7 178 Pfam PF12163 DNA replication regulator 1 177 6.8E-68 T 10-11-2016 IPR021011 DNA replication regulator, HobA CJM129_RS05465 0801188dc69db7d2eaaa14371b516e6f 387 Gene3D G3DSA:1.20.1250.20 200 381 2.0E-7 T 10-11-2016 CJM129_RS05465 0801188dc69db7d2eaaa14371b516e6f 387 Gene3D G3DSA:1.20.1250.20 11 182 6.8E-10 T 10-11-2016 CJM129_RS05465 0801188dc69db7d2eaaa14371b516e6f 387 PANTHER PTHR23523 12 386 5.5E-80 T 10-11-2016 CJM129_RS05465 0801188dc69db7d2eaaa14371b516e6f 387 Pfam PF07690 Major Facilitator Superfamily 16 342 2.1E-15 T 10-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJM129_RS05465 0801188dc69db7d2eaaa14371b516e6f 387 PANTHER PTHR23523:SF2 12 386 5.5E-80 T 10-11-2016 CJM129_RS05465 0801188dc69db7d2eaaa14371b516e6f 387 SUPERFAMILY SSF103473 4 381 1.02E-33 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS07105 43d5d9fd2f32544a09e89829ab5c5320 106 SUPERFAMILY SSF51735 1 101 1.1E-5 T 10-11-2016 IPR016040 NAD(P)-binding domain CJM129_RS07105 43d5d9fd2f32544a09e89829ab5c5320 106 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 93 1.9E-6 T 10-11-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 CJM129_RS08730 66a5531f5caab786261ac3d71ca6d4fd 166 Pfam PF16522 Flagellar FLiS export co-chaperone, HP1076 7 146 3.6E-46 T 10-11-2016 IPR032411 Flagellar FLiS export co-chaperone, HP1076 CJM129_RS01075 97ede1b4e1b364954cfd03be22e698dc 60 Gene3D G3DSA:2.40.128.130 1 57 2.9E-8 T 10-11-2016 IPR005546 Autotransporter beta-domain CJM129_RS01075 97ede1b4e1b364954cfd03be22e698dc 60 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 2 56 7.2E-5 T 10-11-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 CJM129_RS05370 53fa312db32dae23ccb9b60035d3f3d4 63 Pfam PF05538 Campylobacter major outer membrane protein 13 53 1.0E-7 T 10-11-2016 IPR008439 Campylobacter major outer membrane CJM129_RS06805 4041fda15886f554be7fb9b944281d3f 211 Pfam PF14301 Domain of unknown function (DUF4376) 102 203 6.0E-10 T 10-11-2016 IPR025484 Domain of unknown function DUF4376 CJM129_RS06640 546c29e39ab6326011bfc4a9f2c47c01 392 SUPERFAMILY SSF53335 103 282 6.35E-25 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06640 546c29e39ab6326011bfc4a9f2c47c01 392 PANTHER PTHR23417 99 279 2.3E-35 T 10-11-2016 CJM129_RS06640 546c29e39ab6326011bfc4a9f2c47c01 392 PANTHER PTHR23417:SF14 99 279 2.3E-35 T 10-11-2016 CJM129_RS06640 546c29e39ab6326011bfc4a9f2c47c01 392 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 56 284 24.806 T 10-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CJM129_RS06640 546c29e39ab6326011bfc4a9f2c47c01 392 Gene3D G3DSA:3.40.50.150 117 234 2.0E-15 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS06640 546c29e39ab6326011bfc4a9f2c47c01 392 Pfam PF02390 Putative methyltransferase 118 279 1.3E-39 T 10-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CJM129_RS06640 546c29e39ab6326011bfc4a9f2c47c01 392 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 109 284 2.5E-40 T 10-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 CJM129_RS08525 a9c74f886bd3c683b0f710b0059c5276 247 Pfam PF10615 Protein of unknown function (DUF2470) 5 62 4.3E-7 T 10-11-2016 IPR019595 Domain of unknown function DUF2470 CJM129_RS08525 a9c74f886bd3c683b0f710b0059c5276 247 Gene3D G3DSA:2.30.110.10 92 226 1.5E-35 T 10-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CJM129_RS08525 a9c74f886bd3c683b0f710b0059c5276 247 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 88 180 3.1E-10 T 10-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 CJM129_RS08525 a9c74f886bd3c683b0f710b0059c5276 247 Gene3D G3DSA:3.20.180.10 4 82 2.9E-11 T 10-11-2016 IPR019595 Domain of unknown function DUF2470 CJM129_RS08525 a9c74f886bd3c683b0f710b0059c5276 247 SUPERFAMILY SSF50475 5 64 3.18E-5 T 10-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CJM129_RS08525 a9c74f886bd3c683b0f710b0059c5276 247 TIGRFAM TIGR04109 heme_ox_HugZ: heme oxygenase, HugZ family 6 246 3.4E-114 T 10-11-2016 IPR026324 Haem oxygenase, HugZ CJM129_RS08525 a9c74f886bd3c683b0f710b0059c5276 247 SUPERFAMILY SSF50475 89 237 5.67E-23 T 10-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 CJM129_RS02905 402e1d0b25216d514848950bafec534b 291 Gene3D G3DSA:3.40.50.1100 123 285 1.4E-10 T 10-11-2016 CJM129_RS02905 402e1d0b25216d514848950bafec534b 291 Gene3D G3DSA:3.40.50.1100 34 106 1.9E-5 T 10-11-2016 CJM129_RS02905 402e1d0b25216d514848950bafec534b 291 SUPERFAMILY SSF53686 8 287 4.16E-39 T 10-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJM129_RS07000 a10029eb044caf4847c245e430ccffed 297 Gene3D G3DSA:3.40.50.150 121 281 5.4E-21 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07000 a10029eb044caf4847c245e430ccffed 297 SUPERFAMILY SSF53335 117 280 8.12E-25 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07000 a10029eb044caf4847c245e430ccffed 297 Pfam PF08242 Methyltransferase domain 135 231 1.4E-12 T 10-11-2016 IPR013217 Methyltransferase type 12 CJM129_RS09070 3c8e0e15f6e33499534a1f7f0b33dc19 141 Gene3D G3DSA:3.90.470.10 2 104 1.5E-27 T 10-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09070 3c8e0e15f6e33499534a1f7f0b33dc19 141 PANTHER PTHR13501 3 103 6.2E-23 T 10-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CJM129_RS09070 3c8e0e15f6e33499534a1f7f0b33dc19 141 Pfam PF00237 Ribosomal protein L22p/L17e 7 101 1.2E-20 T 10-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09070 3c8e0e15f6e33499534a1f7f0b33dc19 141 ProSitePatterns PS00464 Ribosomal protein L22 signature. 78 102 - T 10-11-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJM129_RS09070 3c8e0e15f6e33499534a1f7f0b33dc19 141 SUPERFAMILY SSF54843 3 103 2.22E-28 T 10-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CJM129_RS09070 3c8e0e15f6e33499534a1f7f0b33dc19 141 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 4 102 4.6E-30 T 10-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CJM129_RS09070 3c8e0e15f6e33499534a1f7f0b33dc19 141 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 105 21.606 T 10-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 CJM129_RS03295 84cb3505034833ddc020bbff68420bae 145 SUPERFAMILY SSF54523 5 142 6.98E-12 T 10-11-2016 CJM129_RS03295 84cb3505034833ddc020bbff68420bae 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 23 1.9E-5 T 10-11-2016 IPR012902 Prokaryotic N-terminal methylation site CJM129_RS03295 84cb3505034833ddc020bbff68420bae 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 21 6.7E-5 T 10-11-2016 IPR012902 Prokaryotic N-terminal methylation site CJM129_RS04435 80a235020172fcaa79f8055ed55c57b3 250 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 42 138 3.8E-31 T 10-11-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CJM129_RS04435 80a235020172fcaa79f8055ed55c57b3 250 PANTHER PTHR30614 1 249 7.2E-73 T 10-11-2016 CJM129_RS04435 80a235020172fcaa79f8055ed55c57b3 250 SUPERFAMILY SSF161098 42 229 1.5E-43 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04435 80a235020172fcaa79f8055ed55c57b3 250 Gene3D G3DSA:1.10.3720.10 38 245 5.0E-49 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS04435 80a235020172fcaa79f8055ed55c57b3 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 244 2.7E-20 T 10-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJM129_RS03025 d152d56ceaa9a951336c0d6437369746 363 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 361 3.4E-152 T 10-11-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CJM129_RS03025 d152d56ceaa9a951336c0d6437369746 363 PANTHER PTHR30149:SF0 2 361 3.3E-179 T 10-11-2016 CJM129_RS03025 d152d56ceaa9a951336c0d6437369746 363 Pfam PF01924 Hydrogenase formation hypA family 16 358 7.6E-148 T 10-11-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CJM129_RS03025 d152d56ceaa9a951336c0d6437369746 363 PIRSF PIRSF005622 1 363 2.4E-161 T 10-11-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 CJM129_RS03025 d152d56ceaa9a951336c0d6437369746 363 PANTHER PTHR30149 2 361 3.3E-179 T 10-11-2016 CJM129_RS01295 90f52699865d41de6c7cdfafe703359d 68 Pfam PF01361 Tautomerase enzyme 2 61 2.8E-19 T 10-11-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CJM129_RS01295 90f52699865d41de6c7cdfafe703359d 68 SUPERFAMILY SSF55331 2 63 1.28E-15 T 10-11-2016 IPR014347 Tautomerase/MIF superfamily CJM129_RS01295 90f52699865d41de6c7cdfafe703359d 68 Gene3D G3DSA:3.30.429.20 2 61 2.3E-17 T 10-11-2016 CJM129_RS01295 90f52699865d41de6c7cdfafe703359d 68 PANTHER PTHR35530 1 66 9.8E-12 T 10-11-2016 CJM129_RS01295 90f52699865d41de6c7cdfafe703359d 68 PANTHER PTHR35530:SF1 1 66 9.8E-12 T 10-11-2016 CJM129_RS07365 9f620be8eeb1846a58123126e4b562f4 232 PANTHER PTHR30035 35 168 1.4E-34 T 10-11-2016 IPR007428 MlaA lipoprotein GO:0016020 CJM129_RS07365 9f620be8eeb1846a58123126e4b562f4 232 PRINTS PR01805 VacJ lipoprotein signature 55 71 2.2E-23 T 10-11-2016 IPR007428 MlaA lipoprotein GO:0016020 CJM129_RS07365 9f620be8eeb1846a58123126e4b562f4 232 PRINTS PR01805 VacJ lipoprotein signature 142 159 2.2E-23 T 10-11-2016 IPR007428 MlaA lipoprotein GO:0016020 CJM129_RS07365 9f620be8eeb1846a58123126e4b562f4 232 PRINTS PR01805 VacJ lipoprotein signature 38 51 2.2E-23 T 10-11-2016 IPR007428 MlaA lipoprotein GO:0016020 CJM129_RS07365 9f620be8eeb1846a58123126e4b562f4 232 PRINTS PR01805 VacJ lipoprotein signature 106 123 2.2E-23 T 10-11-2016 IPR007428 MlaA lipoprotein GO:0016020 CJM129_RS07365 9f620be8eeb1846a58123126e4b562f4 232 PANTHER PTHR30035:SF2 35 168 1.4E-34 T 10-11-2016 CJM129_RS07365 9f620be8eeb1846a58123126e4b562f4 232 Pfam PF04333 MlaA lipoprotein 36 228 3.8E-62 T 10-11-2016 IPR007428 MlaA lipoprotein GO:0016020 CJM129_RS06755 16be1011fa1f96ab278619a4e01c908b 127 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 6 64 1.7E-6 T 10-11-2016 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 CJM129_RS05575 9afe7ad260c90e1b42a16df4f7b52d4c 362 Gene3D G3DSA:3.90.950.20 208 355 1.9E-40 T 10-11-2016 IPR008136 CinA, C-terminal CJM129_RS05575 9afe7ad260c90e1b42a16df4f7b52d4c 362 SUPERFAMILY SSF142433 206 355 7.98E-39 T 10-11-2016 IPR008136 CinA, C-terminal CJM129_RS05575 9afe7ad260c90e1b42a16df4f7b52d4c 362 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 209 352 1.4E-32 T 10-11-2016 IPR008136 CinA, C-terminal CJM129_RS05575 9afe7ad260c90e1b42a16df4f7b52d4c 362 PANTHER PTHR13939 209 355 4.2E-33 T 10-11-2016 CJM129_RS05575 9afe7ad260c90e1b42a16df4f7b52d4c 362 PANTHER PTHR13939:SF0 209 355 4.2E-33 T 10-11-2016 CJM129_RS05575 9afe7ad260c90e1b42a16df4f7b52d4c 362 Pfam PF02464 Competence-damaged protein 209 354 1.2E-42 T 10-11-2016 IPR008136 CinA, C-terminal CJM129_RS01430 eff6b6369f8c5ad4f34a49ee45459a63 133 SUPERFAMILY SSF50331 2 128 7.98E-11 T 10-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal CJM129_RS01430 eff6b6369f8c5ad4f34a49ee45459a63 133 Gene3D G3DSA:2.40.50.100 66 128 6.4E-11 T 10-11-2016 CJM129_RS06815 8c8843beb761bc53a3226a3db8296111 521 Gene3D G3DSA:1.20.1000.10 46 127 7.7E-8 T 10-11-2016 CJM129_RS06815 8c8843beb761bc53a3226a3db8296111 521 Gene3D G3DSA:1.20.1000.10 287 378 7.7E-8 T 10-11-2016 CJM129_RS04095 eeb48800c09c5f03ca0200f4ca35043e 266 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 1 266 35.881 T 10-11-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CJM129_RS04095 eeb48800c09c5f03ca0200f4ca35043e 266 Pfam PF02666 Phosphatidylserine decarboxylase 51 265 2.0E-49 T 10-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CJM129_RS04095 eeb48800c09c5f03ca0200f4ca35043e 266 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 45 265 1.8E-61 T 10-11-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CJM129_RS04095 eeb48800c09c5f03ca0200f4ca35043e 266 PANTHER PTHR10067 8 265 3.6E-58 T 10-11-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 CJM129_RS01485 6557d0adaaea444bbbc590c4b4b06f41 352 Pfam PF03739 Predicted permease YjgP/YjgQ family 12 350 5.3E-33 T 10-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 CJM129_RS01485 6557d0adaaea444bbbc590c4b4b06f41 352 PANTHER PTHR33529 1 350 7.4E-14 T 10-11-2016 CJM129_RS03805 77673ee227b3de178cc1204f6e1a2563 112 Pfam PF03927 NapD protein 3 75 7.9E-18 T 10-11-2016 IPR005623 Chaperone NapD, nitrate reductase assembly CJM129_RS03805 77673ee227b3de178cc1204f6e1a2563 112 PIRSF PIRSF020431 2 112 2.9E-50 T 10-11-2016 IPR005623 Chaperone NapD, nitrate reductase assembly CJM129_RS06715 7a640697c6ce256bcd3db281f6eff4fa 78 SUPERFAMILY SSF47413 4 48 1.94E-5 T 10-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJM129_RS06715 7a640697c6ce256bcd3db281f6eff4fa 78 Gene3D G3DSA:1.10.260.40 2 38 1.7E-5 T 10-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJM129_RS05780 4b813585a379ead3cb24fa410720527d 75 PANTHER PTHR34984:SF1 1 55 3.2E-15 T 10-11-2016 CJM129_RS05780 4b813585a379ead3cb24fa410720527d 75 Pfam PF02599 Global regulator protein family 1 52 3.9E-21 T 10-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CJM129_RS05780 4b813585a379ead3cb24fa410720527d 75 SUPERFAMILY SSF117130 1 55 7.59E-17 T 10-11-2016 CJM129_RS05780 4b813585a379ead3cb24fa410720527d 75 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 1.0E-13 T 10-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CJM129_RS05780 4b813585a379ead3cb24fa410720527d 75 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 66 1.5E-20 T 10-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CJM129_RS05780 4b813585a379ead3cb24fa410720527d 75 PANTHER PTHR34984 1 55 3.2E-15 T 10-11-2016 CJM129_RS03185 60d6905a18f70c86da0171a653a514ae 136 PANTHER PTHR11654:SF119 15 123 2.4E-32 T 10-11-2016 CJM129_RS03185 60d6905a18f70c86da0171a653a514ae 136 SUPERFAMILY SSF103473 16 121 9.81E-10 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS03185 60d6905a18f70c86da0171a653a514ae 136 PANTHER PTHR11654 15 123 2.4E-32 T 10-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS03185 60d6905a18f70c86da0171a653a514ae 136 Gene3D G3DSA:1.20.1250.20 21 123 3.7E-7 T 10-11-2016 CJM129_RS09155 2be65a8b7dc5e396f3dd49c0275bc79b 176 Gene3D G3DSA:3.40.630.30 1 173 4.6E-46 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS09155 2be65a8b7dc5e396f3dd49c0275bc79b 176 Pfam PF00583 Acetyltransferase (GNAT) family 59 149 9.5E-12 T 10-11-2016 IPR000182 GNAT domain GO:0008080 CJM129_RS09155 2be65a8b7dc5e396f3dd49c0275bc79b 176 SUPERFAMILY SSF55729 1 160 2.79E-23 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS01520 a8eaa8891af821e03c7fd77f4cf5e502 276 Pfam PF02108 Flagellar assembly protein FliH 150 268 6.2E-19 T 10-11-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CJM129_RS08040 c73b7953c4bfd4d26b315f5af75403fb 63 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 0.0011 T 10-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CJM129_RS05710 040d657d97a1693a632aad3f7cf2ed8b 465 Gene3D G3DSA:3.30.70.270 326 437 5.2E-4 T 10-11-2016 CJM129_RS05710 040d657d97a1693a632aad3f7cf2ed8b 465 SUPERFAMILY SSF55073 326 432 7.45E-6 T 10-11-2016 IPR029787 Nucleotide cyclase CJM129_RS01125 ad39ec115ca7eaca95a1927a7bc44bb8 140 Pfam PF06271 RDD family 9 128 1.2E-13 T 10-11-2016 IPR010432 RDD CJM129_RS08760 e76eb12dce947abf0c56dd6bef86c998 60 Pfam PF14070 Putative motility protein 5 58 7.5E-11 T 10-11-2016 IPR025906 Putative motility protein CJM129_RS06040 66b81f697e208fd6869903718d0d08ec 74 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 1 71 3.7E-12 T 10-11-2016 IPR018681 Protein of unknown function DUF2165, transmembrane CJM129_RS05455 acd2d8b52b281747276d61c9ab696071 387 PANTHER PTHR30474 3 230 1.4E-73 T 10-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CJM129_RS05455 acd2d8b52b281747276d61c9ab696071 387 PANTHER PTHR30474 246 387 1.4E-73 T 10-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CJM129_RS05455 acd2d8b52b281747276d61c9ab696071 387 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 4 384 2.0E-116 T 10-11-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CJM129_RS05455 acd2d8b52b281747276d61c9ab696071 387 Pfam PF01098 Cell cycle protein 7 385 2.1E-82 T 10-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CJM129_RS08875 e00a4af171b23556ca935130589596f6 122 SUPERFAMILY SSF143100 4 77 3.92E-8 T 10-11-2016 CJM129_RS08875 e00a4af171b23556ca935130589596f6 122 Gene3D G3DSA:1.10.1220.10 81 115 7.7E-5 T 10-11-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJM129_RS06285 dd2255dcf0c5c40bd7004b075c4aef94 185 Pfam PF13905 Thioredoxin-like 71 161 6.8E-13 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS06285 dd2255dcf0c5c40bd7004b075c4aef94 185 SUPERFAMILY SSF52833 1 182 1.67E-27 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS06285 dd2255dcf0c5c40bd7004b075c4aef94 185 Gene3D G3DSA:3.40.30.10 2 184 1.5E-36 T 10-11-2016 IPR012336 Thioredoxin-like fold CJM129_RS07060 574363b7e3067e87947d350edc004750 157 SUPERFAMILY SSF55729 10 145 2.09E-22 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS07060 574363b7e3067e87947d350edc004750 157 Gene3D G3DSA:3.40.630.30 9 141 5.3E-25 T 10-11-2016 IPR016181 Acyl-CoA N-acyltransferase CJM129_RS07060 574363b7e3067e87947d350edc004750 157 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 5 142 1.0E-54 T 10-11-2016 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase CJM129_RS07060 574363b7e3067e87947d350edc004750 157 Pfam PF13302 Acetyltransferase (GNAT) domain 9 134 1.7E-12 T 10-11-2016 IPR000182 GNAT domain GO:0008080 CJM129_RS01145 e912f5ed495e6af8f4726743d86bbf9e 231 PANTHER PTHR23291 1 231 2.9E-61 T 10-11-2016 IPR006214 Bax inhibitor 1-related CJM129_RS01145 e912f5ed495e6af8f4726743d86bbf9e 231 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 25 225 1.5E-49 T 10-11-2016 CJM129_RS08850 4ae1c49385b6d0ece8dd3719697960c7 397 Pfam PF13481 AAA domain 66 241 6.6E-12 T 10-11-2016 CJM129_RS08850 4ae1c49385b6d0ece8dd3719697960c7 397 SUPERFAMILY SSF52540 50 243 7.68E-10 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS08850 4ae1c49385b6d0ece8dd3719697960c7 397 Gene3D G3DSA:3.40.50.300 78 281 4.1E-12 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS06670 2bc2940f420dd9e1b02440f6c1f99df1 68 Pfam PF12728 Helix-turn-helix domain 10 65 6.3E-8 T 10-11-2016 CJM129_RS08615 026f66ab2ca5bed06e46e84f867ffab8 247 Pfam PF14080 Domain of unknown function (DUF4261) 172 245 7.5E-15 T 10-11-2016 IPR025357 Domain of unknown function DUF4261 CJM129_RS06905 868cdf23ebac16100aae7b49a7caf262 211 Pfam PF05119 Phage terminase, small subunit 109 198 8.9E-8 T 10-11-2016 IPR006448 Putative phage terminase, small subunit, P27 family CJM129_RS07805 28d042e4eb4700084d2ff6b4d88948bb 144 Pfam PF05130 FlgN protein 2 135 8.3E-16 T 10-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CJM129_RS05510 c3724494c69289c1254000f9b879f9cc 199 PANTHER PTHR38825 1 199 1.4E-19 T 10-11-2016 CJM129_RS05510 c3724494c69289c1254000f9b879f9cc 199 Pfam PF01810 LysE type translocator 15 195 2.7E-43 T 10-11-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 CJM129_RS08470 dd59abe71f82941945201f1136a93fad 312 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 6 59 1.9E-13 T 10-11-2016 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 CJM129_RS05610 9e06d3579ab4fa11e2e12a5252c1e259 288 Pfam PF04393 Protein of unknown function (DUF535) 20 281 2.9E-64 T 10-11-2016 IPR007488 Protein of unknown function DUF535 CJM129_RS05610 9e06d3579ab4fa11e2e12a5252c1e259 288 PANTHER PTHR38785 6 286 3.0E-34 T 10-11-2016 CJM129_RS00685 62d6e6fe5aa5ea37ab60c48394e39eb9 77 SUPERFAMILY SSF64376 1 58 4.45E-6 T 10-11-2016 IPR007393 Domain of unknown function DUF448 CJM129_RS00685 62d6e6fe5aa5ea37ab60c48394e39eb9 77 Pfam PF04296 Protein of unknown function (DUF448) 1 57 1.5E-5 T 10-11-2016 IPR007393 Domain of unknown function DUF448 CJM129_RS00685 62d6e6fe5aa5ea37ab60c48394e39eb9 77 Gene3D G3DSA:3.30.1230.10 1 56 5.9E-5 T 10-11-2016 IPR007393 Domain of unknown function DUF448 CJM129_RS01970 a9126489124275e85067099a08b4b15f 728 SUPERFAMILY SSF52540 273 464 9.6E-36 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01970 a9126489124275e85067099a08b4b15f 728 SUPERFAMILY SSF52540 147 245 9.6E-36 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01970 a9126489124275e85067099a08b4b15f 728 Gene3D G3DSA:3.40.50.300 153 197 2.9E-27 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01970 a9126489124275e85067099a08b4b15f 728 Gene3D G3DSA:3.40.50.300 280 403 2.9E-27 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS01970 a9126489124275e85067099a08b4b15f 728 Pfam PF00350 Dynamin family 165 359 1.5E-31 T 10-11-2016 IPR022812 Dynamin superfamily CJM129_RS08810 e9292deaa56f048cc5fa09a6eb32ed50 145 Pfam PF04214 Protein of unknown function, DUF 45 114 1.7E-28 T 10-11-2016 IPR007332 Protein of unknown function DUF411 CJM129_RS05480 1b39ec83c5420569eb1e36ed54e58483 201 PANTHER PTHR20857 5 191 2.0E-24 T 10-11-2016 CJM129_RS05480 1b39ec83c5420569eb1e36ed54e58483 201 Pfam PF02581 Thiamine monophosphate synthase/TENI 8 180 1.9E-30 T 10-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CJM129_RS05480 1b39ec83c5420569eb1e36ed54e58483 201 SUPERFAMILY SSF51391 6 197 5.89E-37 T 10-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 CJM129_RS05480 1b39ec83c5420569eb1e36ed54e58483 201 Gene3D G3DSA:3.20.20.70 5 199 1.9E-43 T 10-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 CJM129_RS08065 8e8da0c75303846f419362c1e97788e9 148 Pfam PF02391 MoaE protein 20 116 2.9E-11 T 10-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS08065 8e8da0c75303846f419362c1e97788e9 148 Gene3D G3DSA:3.90.1170.40 2 141 2.1E-31 T 10-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS08065 8e8da0c75303846f419362c1e97788e9 148 SUPERFAMILY SSF54690 7 141 4.45E-32 T 10-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 CJM129_RS07580 9eea970d77af33521a3f0f4ddba6c362 253 Pfam PF08241 Methyltransferase domain 45 135 5.3E-13 T 10-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CJM129_RS07580 9eea970d77af33521a3f0f4ddba6c362 253 PANTHER PTHR10108 1 190 3.0E-21 T 10-11-2016 CJM129_RS07580 9eea970d77af33521a3f0f4ddba6c362 253 SUPERFAMILY SSF53335 3 232 2.89E-31 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS07580 9eea970d77af33521a3f0f4ddba6c362 253 Gene3D G3DSA:3.40.50.150 2 236 3.6E-36 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS03380 4eccb853552c79f50c5c6d6d79e5278f 231 SUPERFAMILY SSF75708 47 229 7.98E-35 T 10-11-2016 CJM129_RS03380 4eccb853552c79f50c5c6d6d79e5278f 231 Gene3D G3DSA:1.10.287.500 66 189 1.3E-7 T 10-11-2016 CJM129_RS04645 1735279ff2e52cbecdd56d65ee948727 272 Pfam PF14804 Jag N-terminus 4 51 9.7E-15 T 10-11-2016 IPR032782 Jag, N-terminal CJM129_RS04645 1735279ff2e52cbecdd56d65ee948727 272 Gene3D G3DSA:3.30.300.120 121 197 1.4E-10 T 10-11-2016 CJM129_RS04645 1735279ff2e52cbecdd56d65ee948727 272 Gene3D G3DSA:3.30.30.80 1 53 2.2E-19 T 10-11-2016 IPR032782 Jag, N-terminal CJM129_RS04645 1735279ff2e52cbecdd56d65ee948727 272 SMART SM01245 2 53 1.3E-18 T 10-11-2016 IPR032782 Jag, N-terminal CJM129_RS05080 02ce599feb533463a8586ca14d9fcf32 465 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 463 1.8E-112 T 10-11-2016 IPR010263 Type VI secretion protein, VC_A0114 CJM129_RS05080 02ce599feb533463a8586ca14d9fcf32 465 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 464 1.7E-102 T 10-11-2016 IPR010263 Type VI secretion protein, VC_A0114 CJM129_RS05080 02ce599feb533463a8586ca14d9fcf32 465 PANTHER PTHR35566 1 463 3.0E-61 T 10-11-2016 CJM129_RS05080 02ce599feb533463a8586ca14d9fcf32 465 PANTHER PTHR35566:SF1 1 463 3.0E-61 T 10-11-2016 CJM129_RS00020 46895751142787bef18f09af7dfd5b97 113 SUPERFAMILY SSF46626 35 105 2.76E-12 T 10-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 CJM129_RS07740 6e33b84144f74b97430e332414861632 237 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 5 214 4.2E-19 T 10-11-2016 CJM129_RS03175 62044bdd81faf9ed82b489d34b8411cc 104 Pfam PF00854 POT family 8 95 5.1E-12 T 10-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS03175 62044bdd81faf9ed82b489d34b8411cc 104 PANTHER PTHR11654:SF119 17 93 1.6E-15 T 10-11-2016 CJM129_RS03175 62044bdd81faf9ed82b489d34b8411cc 104 PANTHER PTHR11654 17 93 1.6E-15 T 10-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 CJM129_RS06515 341ce35b8146f6edb503f6db6e0f1eb3 682 Gene3D G3DSA:2.60.450.10 13 94 3.8E-6 T 10-11-2016 CJM129_RS06515 341ce35b8146f6edb503f6db6e0f1eb3 682 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 4 668 14.877 T 10-11-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CJM129_RS03000 011688b7c9d0a9c4469dde27d02ce4b8 215 PANTHER PTHR30399 7 213 1.0E-20 T 10-11-2016 CJM129_RS03000 011688b7c9d0a9c4469dde27d02ce4b8 215 Pfam PF01863 Protein of unknown function DUF45 26 212 6.7E-41 T 10-11-2016 IPR002725 Protein of unknown function DUF45 CJM129_RS06655 75a7ff33d91ef86a2b8758d70da7ca3e 366 PANTHER PTHR30474:SF1 1 351 3.6E-94 T 10-11-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CJM129_RS06655 75a7ff33d91ef86a2b8758d70da7ca3e 366 Pfam PF01098 Cell cycle protein 17 354 5.6E-87 T 10-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CJM129_RS06655 75a7ff33d91ef86a2b8758d70da7ca3e 366 PANTHER PTHR30474 1 351 3.6E-94 T 10-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 CJM129_RS06530 5b70e172f1fd1ab21c5926bcabb4169b 220 Pfam PF14014 Protein of unknown function (DUF4230) 42 207 1.1E-18 T 10-11-2016 IPR025324 Protein of unknown function DUF4230 CJM129_RS01445 acd6601253111082d8b69559dc66741c 203 Pfam PF04301 Protein of unknown function (DUF452) 9 201 8.5E-22 T 10-11-2016 IPR007398 Protein of unknown function DUF452 CJM129_RS03395 ef2648cdb5602f14780d5bcc14dbfe69 178 Pfam PF13118 Protein of unknown function (DUF3972) 9 132 6.9E-51 T 10-11-2016 IPR025002 Domain of unknown function DUF3972 CJM129_RS02065 90d8c8138717a4a18dcbf8a086b37396 245 SUPERFAMILY SSF54523 5 140 7.38E-5 T 10-11-2016 CJM129_RS07595 3fe9bcc6ccd73c916fbefdcce46c773f 630 Pfam PF11186 Protein of unknown function (DUF2972) 411 621 2.5E-37 T 10-11-2016 IPR021353 Protein of unknown function DUF2972 CJM129_RS03645 5d4f6ac654268933cda14ce9b589716a 263 SUPERFAMILY SSF46785 5 82 2.09E-15 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS03645 5d4f6ac654268933cda14ce9b589716a 263 Gene3D G3DSA:1.10.10.10 2 81 1.2E-20 T 10-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain CJM129_RS03815 62f9c0094731e684c50560a4e675e204 81 Gene3D G3DSA:1.25.40.10 8 40 5.3E-4 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS00240 441e6c80438bad15dadbba504c6b004c 623 Pfam PF03961 Protein of unknown function (DUF342) 101 552 3.8E-56 T 10-11-2016 IPR005646 Protein of unknown function DUF342 CJM129_RS01275 af26f1ef9cd4fd0d1faebb14f5f55cf8 169 Pfam PF09624 Protein of unknown function (DUF2393) 20 168 3.5E-32 T 10-11-2016 IPR013417 Conserved hypothetical protein CHP02588 CJM129_RS08855 fa18652eebb5206df59049e5b31f1dce 371 SUPERFAMILY SSF57783 6 88 3.23E-5 T 10-11-2016 CJM129_RS08855 fa18652eebb5206df59049e5b31f1dce 371 Gene3D G3DSA:3.90.580.10 39 82 9.0E-4 T 10-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJM129_RS05860 ea5477985aafd72a2305eddfcd145e6b 297 Gene3D G3DSA:3.30.450.20 37 138 1.1E-22 T 10-11-2016 CJM129_RS05860 ea5477985aafd72a2305eddfcd145e6b 297 SUPERFAMILY SSF103190 12 147 1.57E-23 T 10-11-2016 IPR029151 Periplasmic sensor domain-like CJM129_RS00525 305ac19d023cfa229551f943cfc2f48d 170 Hamap MF_01398 ATP synthase subunit b [atpF]. 16 169 9.434 T 10-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CJM129_RS00525 305ac19d023cfa229551f943cfc2f48d 170 Pfam PF00430 ATP synthase B/B' CF(0) 30 125 1.8E-13 T 10-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CJM129_RS03880 24685e522aae7e93cf8ba4d52753d811 619 Pfam PF03961 Protein of unknown function (DUF342) 121 552 6.5E-32 T 10-11-2016 IPR005646 Protein of unknown function DUF342 CJM129_RS03135 b9deec92d42b96d421304c57e4c5a21d 171 Gene3D G3DSA:2.60.450.10 84 163 9.6E-6 T 10-11-2016 CJM129_RS02660 8574ece1a10fa881ec7fe245ea68e65b 334 Pfam PF11199 Protein of unknown function (DUF2891) 7 328 2.6E-121 T 10-11-2016 IPR021365 Protein of unknown function DUF2891 CJM129_RS03255 2c5c15d6e4b288a545b400695adaa06a 92 PANTHER PTHR30607 1 92 2.4E-32 T 10-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CJM129_RS03255 2c5c15d6e4b288a545b400695adaa06a 92 Pfam PF03814 Potassium-transporting ATPase A subunit 2 92 2.8E-33 T 10-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CJM129_RS04200 8cc6846efdc8c21d8a344f53364fa930 94 Pfam PF05935 Arylsulfotransferase (ASST) 2 80 4.8E-13 T 10-11-2016 IPR010262 Arylsulfotransferase CJM129_RS05140 55778b07bac49d36bc63e07339bf149f 592 Pfam PF15649 Restriction endonuclease fold toxin 7 410 483 5.9E-8 T 10-11-2016 IPR028903 Tox-REase-7 domain CJM129_RS02535 24e417ca1074d2252dfdeb4181222ca7 856 Pfam PF13109 AsmA-like C-terminal region 635 848 4.1E-79 T 10-11-2016 CJM129_RS02535 24e417ca1074d2252dfdeb4181222ca7 856 Pfam PF13116 Protein of unknown function 217 438 4.7E-21 T 10-11-2016 IPR025263 Domain of unknown function DUF3971 CJM129_RS02410 ec9020d4319386be60b1d6e0ee99ad1d 411 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 10-11-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CJM129_RS02410 ec9020d4319386be60b1d6e0ee99ad1d 411 SUPERFAMILY SSF111352 2 389 5.1E-114 T 10-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CJM129_RS02410 ec9020d4319386be60b1d6e0ee99ad1d 411 PANTHER PTHR11730:SF17 1 410 1.6E-157 T 10-11-2016 CJM129_RS02410 ec9020d4319386be60b1d6e0ee99ad1d 411 Gene3D G3DSA:1.10.3430.10 1 389 6.2E-123 T 10-11-2016 IPR029020 Ammonium/urea transporter CJM129_RS02410 ec9020d4319386be60b1d6e0ee99ad1d 411 Pfam PF00909 Ammonium Transporter Family 8 408 1.1E-120 T 10-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CJM129_RS02410 ec9020d4319386be60b1d6e0ee99ad1d 411 PANTHER PTHR11730 1 410 1.6E-157 T 10-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CJM129_RS02410 ec9020d4319386be60b1d6e0ee99ad1d 411 TIGRFAM TIGR00836 amt: ammonium transporter 6 408 1.2E-132 T 10-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CJM129_RS02175 fbd6cacfa8f70c243316b0892f4bbbf2 71 Pfam PF04325 Protein of unknown function (DUF465) 19 66 1.0E-15 T 10-11-2016 IPR007420 Protein of unknown function DUF465 CJM129_RS05350 d7000d8b460ae2aea9ba82187fc01c03 298 PANTHER PTHR11795:SF371 1 290 9.6E-109 T 10-11-2016 CJM129_RS05350 d7000d8b460ae2aea9ba82187fc01c03 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 3.2E-46 T 10-11-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CJM129_RS05350 d7000d8b460ae2aea9ba82187fc01c03 298 PANTHER PTHR11795 1 290 9.6E-109 T 10-11-2016 CJM129_RS03410 67f881d0b4f33e50fd5941166343c9ee 238 Pfam PF02591 C4-type zinc ribbon domain 198 230 2.7E-11 T 10-11-2016 IPR003743 C4-type zinc ribbon domain CJM129_RS03410 67f881d0b4f33e50fd5941166343c9ee 238 PANTHER PTHR39082 1 236 5.4E-27 T 10-11-2016 CJM129_RS07840 1d9e247af9d48eb084156666d9c65469 202 Gene3D G3DSA:3.40.50.300 9 92 5.8E-9 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS07840 1d9e247af9d48eb084156666d9c65469 202 SMART SM00382 22 132 0.0033 T 10-11-2016 IPR003593 AAA+ ATPase domain CJM129_RS07840 1d9e247af9d48eb084156666d9c65469 202 SUPERFAMILY SSF52540 5 176 3.21E-16 T 10-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJM129_RS00265 f22a901916f37f39a5df0c5d2e460829 55 Pfam PF00939 Sodium:sulfate symporter transmembrane region 1 54 8.3E-12 T 10-11-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 CJM129_RS00460 f22f9653f10e986367aeec02d5cbcb39 131 Pfam PF07233 Protein of unknown function (DUF1425) 47 118 3.9E-8 T 10-11-2016 IPR010824 Protein of unknown function DUF1425 CJM129_RS08725 9a4ae5c54b0185ceb08cec13f8e26042 199 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 49 190 1.6E-6 T 10-11-2016 IPR005586 ABC-type transport auxiliary lipoprotein component CJM129_RS08725 9a4ae5c54b0185ceb08cec13f8e26042 199 SUPERFAMILY SSF159594 47 197 1.94E-27 T 10-11-2016 CJM129_RS08725 9a4ae5c54b0185ceb08cec13f8e26042 199 Gene3D G3DSA:3.40.50.10610 47 198 1.9E-24 T 10-11-2016 IPR005586 ABC-type transport auxiliary lipoprotein component CJM129_RS04120 dafdd47faff44b4c646c68f714a4bc92 109 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 32 80 8.6E-12 T 10-11-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter CJM129_RS04120 dafdd47faff44b4c646c68f714a4bc92 109 Gene3D G3DSA:1.20.1250.20 32 76 6.7E-4 T 10-11-2016 CJM129_RS01260 44e21a0e2e5665bd84553a3101dbfbc7 1026 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 354 368 1.4E-6 T 10-11-2016 CJM129_RS01260 44e21a0e2e5665bd84553a3101dbfbc7 1026 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 314 330 1.4E-6 T 10-11-2016 CJM129_RS01260 44e21a0e2e5665bd84553a3101dbfbc7 1026 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 471 483 1.4E-6 T 10-11-2016 CJM129_RS01260 44e21a0e2e5665bd84553a3101dbfbc7 1026 SUPERFAMILY SSF53335 469 492 1.35E-28 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01260 44e21a0e2e5665bd84553a3101dbfbc7 1026 SUPERFAMILY SSF53335 194 437 1.35E-28 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01260 44e21a0e2e5665bd84553a3101dbfbc7 1026 SUPERFAMILY SSF53335 550 680 1.35E-28 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01260 44e21a0e2e5665bd84553a3101dbfbc7 1026 Gene3D G3DSA:3.40.50.150 316 487 2.8E-16 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS01260 44e21a0e2e5665bd84553a3101dbfbc7 1026 Gene3D G3DSA:3.40.50.150 528 662 2.8E-16 T 10-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJM129_RS00190 3bbed161f0cdeabea03a0f9d209c39df 233 PIRSF PIRSF029033 1 233 6.2E-112 T 10-11-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein CJM129_RS00190 3bbed161f0cdeabea03a0f9d209c39df 233 Pfam PF04402 Protein of unknown function (DUF541) 37 205 1.8E-14 T 10-11-2016 IPR007497 Protein of unknown function DUF541 CJM129_RS02000 c908aa32cfabb03ef9845de48089f29c 234 Pfam PF12118 SprA-related family 23 198 4.7E-30 T 10-11-2016 IPR021973 SprA-related family CJM129_RS06100 e896f6a9a94fd94b3810b328f58554ac 482 Pfam PF11853 Protein of unknown function (DUF3373) 1 462 6.0E-47 T 10-11-2016 IPR021803 Protein of unknown function DUF3373 CJM129_RS01805 7e015a3dc364a04c8390bb458be53423 179 Pfam PF01794 Ferric reductase like transmembrane component 39 130 7.2E-7 T 10-11-2016 IPR013130 Ferric reductase transmembrane component-like domain CJM129_RS04795 8651b6a33abcad034b1354e7189d2ab8 203 SUPERFAMILY SSF103473 11 198 7.32E-16 T 10-11-2016 IPR020846 Major facilitator superfamily domain CJM129_RS04795 8651b6a33abcad034b1354e7189d2ab8 203 Gene3D G3DSA:1.20.1250.20 16 195 1.6E-12 T 10-11-2016 CJM129_RS07555 e58e98f59c228dc66cb02cb3903b0384 689 Pfam PF05159 Capsule polysaccharide biosynthesis protein 401 634 4.0E-33 T 10-11-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CJM129_RS07555 e58e98f59c228dc66cb02cb3903b0384 689 Pfam PF05159 Capsule polysaccharide biosynthesis protein 37 289 1.9E-40 T 10-11-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CJM129_RS05195 5fcf97915d0465dcc53ba6600cc2a428 341 Pfam PF14021 Protein of unknown function (DUF4237) 215 340 3.5E-21 T 10-11-2016 IPR025331 Protein of unknown function DUF4237 CJM129_RS09195 a4497201c2a122b2da37777fcf94c237 199 Gene3D G3DSA:3.50.50.60 5 185 1.2E-20 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS09195 a4497201c2a122b2da37777fcf94c237 199 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 120 5.2E-10 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS09195 a4497201c2a122b2da37777fcf94c237 199 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.3E-5 T 10-11-2016 CJM129_RS09195 a4497201c2a122b2da37777fcf94c237 199 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.3E-5 T 10-11-2016 CJM129_RS09195 a4497201c2a122b2da37777fcf94c237 199 SUPERFAMILY SSF51905 2 185 4.26E-17 T 10-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJM129_RS06845 2416f1887c3b0363794d82946886a128 185 Pfam PF04586 Caudovirus prohead serine protease 71 157 7.5E-6 T 10-11-2016 IPR006433 Prohead protease CJM129_RS07660 cb09fa4ff596548f26e879fd9c83a595 510 Gene3D G3DSA:3.40.50.1110 3 150 1.0E-4 T 10-11-2016 IPR013830 SGNH hydrolase-type esterase domain CJM129_RS07660 cb09fa4ff596548f26e879fd9c83a595 510 SUPERFAMILY SSF52266 3 163 4.76E-5 T 10-11-2016 IPR013830 SGNH hydrolase-type esterase domain CJM129_RS02655 29746b73f4f486c0686cc81645a00dfa 317 Pfam PF06166 Protein of unknown function (DUF979) 6 315 7.7E-116 T 10-11-2016 IPR009323 Protein of unknown function DUF979 CJM129_RS07550 d3ee874f24e9b41f32cbd5878b269573 394 Pfam PF05159 Capsule polysaccharide biosynthesis protein 81 387 8.7E-71 T 10-11-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CJM129_RS01895 cf2542e7ceddecc2c35c0c3d16f61ea6 332 SUPERFAMILY SSF50978 82 291 1.72E-7 T 10-11-2016 IPR017986 WD40-repeat-containing domain GO:0005515 CJM129_RS05090 45598c14f2c682798d53206fbd8bf50b 415 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 176 356 1.3E-12 T 10-11-2016 IPR017739 Type VI secretion system-associated, VCA0119 CJM129_RS05130 2fb29038cb6821c8a86344f4a60c659b 569 Pfam PF15649 Restriction endonuclease fold toxin 7 418 491 1.5E-7 T 10-11-2016 IPR028903 Tox-REase-7 domain CJM129_RS03485 0be341197a15b32da082637dae238c05 156 Pfam PF13664 Domain of unknown function (DUF4149) 8 117 2.7E-13 T 10-11-2016 IPR025423 Domain of unknown function DUF4149 CJM129_RS07905 435244b0189cdb0e5bd948552c505a5f 72 Pfam PF13179 Family of unknown function (DUF4006) 1 65 1.1E-31 T 10-11-2016 IPR025065 Protein of unknown function DUF4006 CJM129_RS06825 a87c98786354e58e0b5a414dc134507c 105 Pfam PF05521 Phage head-tail joining protein 7 101 6.8E-7 T 10-11-2016 IPR008767 Bacteriophage SPP1, head-tail adaptor CJM129_RS02020 98ae70eb096f8563fef2ce8475c6ce09 69 Gene3D G3DSA:1.10.10.700 2 35 5.7E-6 T 10-11-2016 CJM129_RS06510 e61102ea691327828614f4990aa00168 150 Pfam PF06271 RDD family 17 142 4.1E-21 T 10-11-2016 IPR010432 RDD CJM129_RS07055 0c11cb4360073f48293c6361567dfe38 274 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 263 4.1E-83 T 10-11-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase CJM129_RS06545 47023f1c6b1da2f8296053335a2b38da 424 Pfam PF05538 Campylobacter major outer membrane protein 1 424 2.6E-173 T 10-11-2016 IPR008439 Campylobacter major outer membrane CJM129_RS06545 47023f1c6b1da2f8296053335a2b38da 424 SUPERFAMILY SSF56935 222 303 8.06E-22 T 10-11-2016 CJM129_RS06545 47023f1c6b1da2f8296053335a2b38da 424 SUPERFAMILY SSF56935 331 424 8.06E-22 T 10-11-2016 CJM129_RS06545 47023f1c6b1da2f8296053335a2b38da 424 SUPERFAMILY SSF56935 23 170 8.06E-22 T 10-11-2016 CJM129_RS07775 45de87d7cf7ea603a66ac46ae28cb837 357 SUPERFAMILY SSF54292 3 100 1.6E-5 T 10-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJM129_RS00455 c258c17d8f33632b93ff6dccf9657027 453 SUPERFAMILY SSF48452 127 247 1.9E-5 T 10-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJM129_RS00520 a651a9a3077754b5ac5d00bb063abe1a 141 Pfam PF00430 ATP synthase B/B' CF(0) 11 123 2.8E-10 T 10-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CJM129_RS07425 92fe25cbe77d4293a534f8d2f16876e2 104 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 2 89 2.5E-16 T 10-11-2016 IPR016772 Uncharacterised conserved protein UCP020408 CJM129_RS07425 92fe25cbe77d4293a534f8d2f16876e2 104 PIRSF PIRSF020408 1 104 1.6E-41 T 10-11-2016 IPR016772 Uncharacterised conserved protein UCP020408 CJM129_RS07515 b8fac4d09b96007df59830f8b2092d8d 125 Pfam PF06476 Protein of unknown function (DUF1090) 10 116 7.6E-21 T 10-11-2016 IPR009468 Protein of unknown function DUF1090 CJM129_RS03285 d790dcc43f6b48a3e114c46d96ef755f 76 Gene3D G3DSA:1.20.5.1000 15 57 1.4E-4 T 10-11-2016 CJM129_RS00220 86dac04fc512b2811415c351d2aa9ad3 107 Gene3D G3DSA:3.40.930.10 38 82 2.1E-5 T 10-11-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- CJM129_RS06795 f9732db8b10dabbac941682fb2b55203 123 Pfam PF07087 Protein of unknown function (DUF1353) 18 107 1.3E-19 T 10-11-2016 IPR010767 Campylobacter phage CGC-2007, Cje0229 CJM129_RS02665 ab4073e0010b891e0d93d40c06685897 428 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 4 147 2.9E-33 T 10-11-2016 IPR009827 Dicarboxylate carrier MatC N-terminal CJM129_RS06050 10b9ca08215b906cadf51fb94e51b699 59 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 12 52 1.4E-11 T 10-11-2016 IPR018681 Protein of unknown function DUF2165, transmembrane CJM129_RS06070 80f3b59ae429201e001fed60494deef7 87 Pfam PF13453 Transcription factor zinc-finger 3 42 1.6E-22 T 10-11-2016 IPR027392 Transcription factor zinc-finger CJM129_RS08930 251c4bba1761450918e0359cfe0268dd 220 Pfam PF11741 AMIN domain 137 219 1.6E-10 T 10-11-2016 IPR021731 AMIN domain CJM129_RS05235 3e3967ae7e6ac42f0329592be864d73d 116 Pfam PF14132 Domain of unknown function (DUF4299) 13 110 1.8E-9 T 10-11-2016 IPR025387 Protein of unknown function DUF4299 CJM129_RS02605 fdea839910a5038cbe1a943b80eca34b 129 Pfam PF04186 FxsA cytoplasmic membrane protein 9 92 2.3E-6 T 10-11-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CJM129_RS07710 593ed95f86985423df7c336da5dc14f8 372 Pfam PF02706 Chain length determinant protein 23 163 6.4E-6 T 10-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 CJM129_RS01020 2d95bce3781bb5a5d558c77cf6e5a0ad 107 Pfam PF12870 Domain of unknown function (DUF4878) 1 105 1.1E-14 T 10-11-2016 IPR024267 Domain of unknown function (DUF4878)