CJJRM1285_RS00005	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CJJRM1285_RS00010	SM00480	DNA polymerase III beta subunit
CJJRM1285_RS00015	SM00387	Histidine kinase-like ATPases
CJJRM1285_RS00015	SM00433	TopoisomeraseII
CJJRM1285_RS00050	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CJJRM1285_RS00090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CJJRM1285_RS00110	SM00998	Adenylosuccinate lyase C-terminus
CJJRM1285_RS00140	SM00870	CJJRM1285_RS00140
CJJRM1285_RS00175	SM00450	Rhodanese Homology Domain
CJJRM1285_RS00355	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS00355	SM00962	SRP54-type protein, GTPase domain
CJJRM1285_RS00460	SM00986	Uracil DNA glycosylase superfamily
CJJRM1285_RS00460	SM00987	UreE urease accessory protein, C-terminal domain 
CJJRM1285_RS00535	SM00470	ParB-like nuclease domain
CJJRM1285_RS00565	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS00610	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CJJRM1285_RS00740	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS00795	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CJJRM1285_RS00835	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS00895	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS00920	SM00116	Domain in cystathionine beta-synthase and other proteins.
CJJRM1285_RS00920	SM01091	Transporter associated domain
CJJRM1285_RS00980	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS00995	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS01035	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CJJRM1285_RS01080	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CJJRM1285_RS01145	SM00947	Carbonic anhydrase
CJJRM1285_RS01185	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CJJRM1285_RS01185	SM01204	CJJRM1285_RS01185
CJJRM1285_RS01265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CJJRM1285_RS01295	SM00244	prohibitin homologues
CJJRM1285_RS01330	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS01330	SM00994	ClpX C4-type zinc finger
CJJRM1285_RS01330	SM01086	C-terminal, D2-small domain, of ClpB protein
CJJRM1285_RS01345	SM00851	MGS-like domain
CJJRM1285_RS01345	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CJJRM1285_RS01365	SM00260	Two component signalling adaptor domain
CJJRM1285_RS01370	SM00073	Histidine Phosphotransfer domain
CJJRM1285_RS01370	SM00260	Two component signalling adaptor domain
CJJRM1285_RS01370	SM00387	Histidine kinase-like ATPases
CJJRM1285_RS01370	SM00448	cheY-homologous receiver domain
CJJRM1285_RS01370	SM01231	CJJRM1285_RS01370
CJJRM1285_RS01375	SM00260	Two component signalling adaptor domain
CJJRM1285_RS01375	SM00448	cheY-homologous receiver domain
CJJRM1285_RS01445	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS01525	SM00830	Chorismate mutase type II
CJJRM1285_RS01550	SM00861	Transketolase, pyrimidine binding domain
CJJRM1285_RS01605	SM00562	CJJRM1285_RS01605
CJJRM1285_RS01635	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CJJRM1285_RS01635	SM00474	3'-5' exonuclease
CJJRM1285_RS01635	SM00475	5'-3' exonuclease
CJJRM1285_RS01635	SM00479	CJJRM1285_RS01635
CJJRM1285_RS01635	SM00482	DNA polymerase A domain
CJJRM1285_RS01720	SM00448	cheY-homologous receiver domain
CJJRM1285_RS01720	SM00862	Transcriptional regulatory protein, C terminal
CJJRM1285_RS01725	SM00905	Dihydroneopterin aldolase
CJJRM1285_RS01730	SM01207	CJJRM1285_RS01730
CJJRM1285_RS01755	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS01825	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS01840	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CJJRM1285_RS01885	SM00028	Tetratricopeptide repeats
CJJRM1285_RS02000	SM00671	Sel1-like repeats.
CJJRM1285_RS02035	SM00867	YceI-like domain 
CJJRM1285_RS02045	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS02120	SM00822	CJJRM1285_RS02120
CJJRM1285_RS02155	SM00825	Beta-ketoacyl synthase
CJJRM1285_RS02175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CJJRM1285_RS02195	SM00479	CJJRM1285_RS02195
CJJRM1285_RS02225	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS02235	SM00316	Ribosomal protein S1-like RNA-binding domain
CJJRM1285_RS02255	SM00487	DEAD-like helicases superfamily
CJJRM1285_RS02255	SM00490	helicase superfamily c-terminal domain
CJJRM1285_RS02265	SM00100	Cyclic nucleotide-monophosphate binding domain
CJJRM1285_RS02280	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS02325	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CJJRM1285_RS02325	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CJJRM1285_RS02330	SM00649	Ribosomal protein L11/L12
CJJRM1285_RS02355	SM00663	RNA polymerase I subunit A N-terminus
CJJRM1285_RS02370	SM00838	Elongation factor G C-terminus
CJJRM1285_RS02370	SM00889	Elongation factor G, domain IV
CJJRM1285_RS02410	SM00450	Rhodanese Homology Domain
CJJRM1285_RS02425	SM00912	haemagglutination activity domain
CJJRM1285_RS02455	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CJJRM1285_RS02470	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS02470	SM01086	C-terminal, D2-small domain, of ClpB protein
CJJRM1285_RS02480	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CJJRM1285_RS02480	SM00245	tail specific protease
CJJRM1285_RS02495	SM01211	CJJRM1285_RS02495
CJJRM1285_RS02505	SM00563	Phosphate acyltransferases
CJJRM1285_RS02515	SM00387	Histidine kinase-like ATPases
CJJRM1285_RS02520	SM00450	Rhodanese Homology Domain
CJJRM1285_RS02580	SM00881	CoA binding domain
CJJRM1285_RS02670	SM00841	Elongation factor P, C-terminal
CJJRM1285_RS02670	SM01185	CJJRM1285_RS02670
CJJRM1285_RS02725	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS02825	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS02855	SM00292	breast cancer carboxy-terminal domain
CJJRM1285_RS02855	SM00532	Ligase N family
CJJRM1285_RS02870	SM00904	Riboflavin kinase
CJJRM1285_RS02895	SM00477	DNA/RNA non-specific endonuclease
CJJRM1285_RS02895	SM00892	DNA/RNA non-specific endonuclease
CJJRM1285_RS02900	SM00478	endonuclease III
CJJRM1285_RS02900	SM00525	CJJRM1285_RS02900
CJJRM1285_RS02960	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS03005	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS03070	SM00955	CJJRM1285_RS03070
CJJRM1285_RS03090	SM00732	Likely ribonuclease with RNase H fold.
CJJRM1285_RS03130	SM00267	diguanylate cyclase
CJJRM1285_RS03130	SM00448	cheY-homologous receiver domain
CJJRM1285_RS03140	SM00257	Lysin motif
CJJRM1285_RS03215	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS03215	SM01086	C-terminal, D2-small domain, of ClpB protein
CJJRM1285_RS03235	SM00363	S4 RNA-binding domain
CJJRM1285_RS03245	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS03280	SM00487	DEAD-like helicases superfamily
CJJRM1285_RS03280	SM00490	helicase superfamily c-terminal domain
CJJRM1285_RS03300	SM00487	DEAD-like helicases superfamily
CJJRM1285_RS03300	SM00490	helicase superfamily c-terminal domain
CJJRM1285_RS03350	SM00842	Cell division protein FtsA
CJJRM1285_RS03355	SM00864	Tubulin/FtsZ family, GTPase domain
CJJRM1285_RS03355	SM00865	Tubulin/FtsZ family, C-terminal domain
CJJRM1285_RS03370	SM01230	CJJRM1285_RS03370
CJJRM1285_RS03385	SM01001	AIR carboxylase
CJJRM1285_RS03420	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS03420	SM00962	SRP54-type protein, GTPase domain
CJJRM1285_RS03420	SM00963	SRP54-type protein, helical bundle domain
CJJRM1285_RS03450	SM00095	Transthyretin
CJJRM1285_RS03465	SM00481	DNA polymerase alpha chain like domain
CJJRM1285_RS03530	SM00852	Probable molybdopterin binding domain
CJJRM1285_RS03565	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS03575	SM00062	Bacterial periplasmic substrate-binding proteins
CJJRM1285_RS03590	SM00912	haemagglutination activity domain
CJJRM1285_RS03700	SM00487	DEAD-like helicases superfamily
CJJRM1285_RS03775	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS03775	SM00930	CJJRM1285_RS03775
CJJRM1285_RS03805	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CJJRM1285_RS03870	SM00387	Histidine kinase-like ATPases
CJJRM1285_RS03870	SM00388	His Kinase A (phosphoacceptor) domain
CJJRM1285_RS03900	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CJJRM1285_RS03920	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS03935	SM01130	CJJRM1285_RS03935
CJJRM1285_RS03950	SM00849	Metallo-beta-lactamase superfamily
CJJRM1285_RS03980	SM00062	Bacterial periplasmic substrate-binding proteins
CJJRM1285_RS03980	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CJJRM1285_RS04040	SM00881	CoA binding domain
CJJRM1285_RS04065	SM00248	ankyrin repeats
CJJRM1285_RS04180	SM00852	Probable molybdopterin binding domain
CJJRM1285_RS04275	SM01387	CJJRM1285_RS04275
CJJRM1285_RS04280	SM00843	CJJRM1285_RS04280
CJJRM1285_RS04300	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS04305	SM00387	Histidine kinase-like ATPases
CJJRM1285_RS04305	SM00388	His Kinase A (phosphoacceptor) domain
CJJRM1285_RS04310	SM00448	cheY-homologous receiver domain
CJJRM1285_RS04310	SM00862	Transcriptional regulatory protein, C terminal
CJJRM1285_RS04325	SM00316	Ribosomal protein S1-like RNA-binding domain
CJJRM1285_RS04340	SM00873	B3/4 domain
CJJRM1285_RS04340	SM00874	tRNA synthetase B5 domain
CJJRM1285_RS04340	SM00896	Ferredoxin-fold anticodon binding domain
CJJRM1285_RS04370	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS04385	SM01005	Alanine racemase, C-terminal domain
CJJRM1285_RS04420	SM00411	bacterial (prokaryotic) histone like domain
CJJRM1285_RS04445	SM01400	CJJRM1285_RS04445
CJJRM1285_RS04460	SM00062	Bacterial periplasmic substrate-binding proteins
CJJRM1285_RS04465	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS04470	SM00138	Methyltransferase, chemotaxis proteins 
CJJRM1285_RS04590	SM00954	Region found in RelA / SpoT proteins
CJJRM1285_RS04650	SM00671	Sel1-like repeats.
CJJRM1285_RS04665	SM00477	DNA/RNA non-specific endonuclease
CJJRM1285_RS04665	SM00892	DNA/RNA non-specific endonuclease
CJJRM1285_RS04855	SM00563	Phosphate acyltransferases
CJJRM1285_RS04910	SM00957	SecA DEAD-like domain
CJJRM1285_RS04910	SM00958	SecA preprotein cross-linking domain
CJJRM1285_RS04925	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS04955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CJJRM1285_RS04965	SM00798	AICARFT/IMPCHase bienzyme
CJJRM1285_RS04965	SM00851	MGS-like domain
CJJRM1285_RS04970	SM00271	DnaJ molecular chaperone homology domain
CJJRM1285_RS04985	SM01245	CJJRM1285_RS04985
CJJRM1285_RS04995	SM01234	CJJRM1285_RS04995
CJJRM1285_RS05040	SM00912	haemagglutination activity domain
CJJRM1285_RS05065	SM00318	Staphylococcal nuclease homologues
CJJRM1285_RS05080	SM00062	Bacterial periplasmic substrate-binding proteins
CJJRM1285_RS05135	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS05150	SM01004	Delta-aminolevulinic acid dehydratase
CJJRM1285_RS05200	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS05205	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS05250	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS05255	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS05295	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CJJRM1285_RS05300	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS05300	SM00448	cheY-homologous receiver domain
CJJRM1285_RS05315	SM00434	DNA Topoisomerase IV
CJJRM1285_RS05330	SM00838	Elongation factor G C-terminus
CJJRM1285_RS05350	SM00271	DnaJ molecular chaperone homology domain
CJJRM1285_RS05365	SM00878	Biotin carboxylase C-terminal domain
CJJRM1285_RS05390	SM00342	helix_turn_helix, arabinose operon control protein
CJJRM1285_RS05400	SM00876	Biotin and Thiamin Synthesis associated domain
CJJRM1285_RS05435	SM00463	Small MutS-related domain
CJJRM1285_RS05435	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CJJRM1285_RS05435	SM00534	ATPase domain of DNA mismatch repair MUTS family
CJJRM1285_RS05465	SM00116	Domain in cystathionine beta-synthase and other proteins.
CJJRM1285_RS05465	SM01240	CJJRM1285_RS05465
CJJRM1285_RS05510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CJJRM1285_RS05535	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS05535	SM00464	Found in ATP-dependent protease La (LON)
CJJRM1285_RS05585	SM00478	endonuclease III
CJJRM1285_RS05595	SM00487	DEAD-like helicases superfamily
CJJRM1285_RS05595	SM00490	helicase superfamily c-terminal domain
CJJRM1285_RS05595	SM00982	CJJRM1285_RS05595
CJJRM1285_RS05595	SM01058	CarD-like/TRCF domain
CJJRM1285_RS05640	SM01323	CJJRM1285_RS05640
CJJRM1285_RS05710	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS05710	SM01086	C-terminal, D2-small domain, of ClpB protein
CJJRM1285_RS05720	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CJJRM1285_RS05720	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CJJRM1285_RS05750	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS05760	SM00448	cheY-homologous receiver domain
CJJRM1285_RS05820	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS05875	SM00858	CJJRM1285_RS05875
CJJRM1285_RS05940	SM00357	Cold shock protein domain
CJJRM1285_RS05940	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS05940	SM00959	Rho termination factor, N-terminal domain
CJJRM1285_RS05945	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS06025	SM00836	DALR anticodon binding domain
CJJRM1285_RS06025	SM01016	Arginyl tRNA synthetase N terminal dom
CJJRM1285_RS06035	SM00072	Guanylate kinase homologues.
CJJRM1285_RS06050	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS06090	SM01228	CJJRM1285_RS06090
CJJRM1285_RS06100	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CJJRM1285_RS06135	SM00845	GatB domain
CJJRM1285_RS06175	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS06180	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS06180	SM00962	SRP54-type protein, GTPase domain
CJJRM1285_RS06195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJJRM1285_RS06250	SM00883	Chaperonin 10 Kd subunit
CJJRM1285_RS06260	SM00387	Histidine kinase-like ATPases
CJJRM1285_RS06260	SM00388	His Kinase A (phosphoacceptor) domain
CJJRM1285_RS06265	SM00448	cheY-homologous receiver domain
CJJRM1285_RS06265	SM00862	Transcriptional regulatory protein, C terminal
CJJRM1285_RS06285	SM00387	Histidine kinase-like ATPases
CJJRM1285_RS06285	SM00388	His Kinase A (phosphoacceptor) domain
CJJRM1285_RS06290	SM00448	cheY-homologous receiver domain
CJJRM1285_RS06290	SM00862	Transcriptional regulatory protein, C terminal
CJJRM1285_RS06295	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CJJRM1285_RS06300	SM00271	DnaJ molecular chaperone homology domain
CJJRM1285_RS06305	SM00422	helix_turn_helix, mercury resistance
CJJRM1285_RS06385	SM00465	GIY-YIG type nucleases (URI domain)
CJJRM1285_RS06405	SM01209	CJJRM1285_RS06405
CJJRM1285_RS06405	SM01210	CJJRM1285_RS06405
CJJRM1285_RS06420	SM00316	Ribosomal protein S1-like RNA-binding domain
CJJRM1285_RS06420	SM00322	K homology RNA-binding domain
CJJRM1285_RS06425	SM00986	Uracil DNA glycosylase superfamily
CJJRM1285_RS06425	SM00987	UreE urease accessory protein, C-terminal domain 
CJJRM1285_RS06445	SM00226	Low molecular weight phosphatase family
CJJRM1285_RS06455	SM00271	DnaJ molecular chaperone homology domain
CJJRM1285_RS06460	SM00448	cheY-homologous receiver domain
CJJRM1285_RS06460	SM00862	Transcriptional regulatory protein, C terminal
CJJRM1285_RS06465	SM00387	Histidine kinase-like ATPases
CJJRM1285_RS06465	SM00388	His Kinase A (phosphoacceptor) domain
CJJRM1285_RS06500	SM00646	CJJRM1285_RS06500
CJJRM1285_RS06510	SM00363	S4 RNA-binding domain
CJJRM1285_RS06515	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CJJRM1285_RS06515	SM00954	Region found in RelA / SpoT proteins
CJJRM1285_RS06520	SM01409	CJJRM1285_RS06520
CJJRM1285_RS06540	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS06550	SM00060	Fibronectin type 3 domain
CJJRM1285_RS06555	SM00363	S4 RNA-binding domain
CJJRM1285_RS06595	SM00919	Malic enzyme, NAD binding domain
CJJRM1285_RS06595	SM01274	CJJRM1285_RS06595
CJJRM1285_RS06610	SM00878	Biotin carboxylase C-terminal domain
CJJRM1285_RS06740	SM00858	CJJRM1285_RS06740
CJJRM1285_RS06835	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS06890	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS06920	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS06925	SM00869	Autotransporter beta-domain
CJJRM1285_RS07010	SM01060	CJJRM1285_RS07010
CJJRM1285_RS07015	SM00248	ankyrin repeats
CJJRM1285_RS07040	SM00998	Adenylosuccinate lyase C-terminus
CJJRM1285_RS07050	SM00899	CJJRM1285_RS07050
CJJRM1285_RS07080	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CJJRM1285_RS07195	SM00984	UDP binding domain
CJJRM1285_RS07205	SM00116	Domain in cystathionine beta-synthase and other proteins.
CJJRM1285_RS07220	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS07255	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS07260	SM00937	CJJRM1285_RS07260
CJJRM1285_RS07410	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS07420	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS07435	SM00890	Domain of unknown function
CJJRM1285_RS07510	SM00448	cheY-homologous receiver domain
CJJRM1285_RS07510	SM00862	Transcriptional regulatory protein, C terminal
CJJRM1285_RS07515	SM00387	Histidine kinase-like ATPases
CJJRM1285_RS07525	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CJJRM1285_RS07545	SM00788	Adenylosuccinate synthetase
CJJRM1285_RS07585	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CJJRM1285_RS07615	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CJJRM1285_RS07650	SM00871	Bacterial transcription activator, effector binding domain
CJJRM1285_RS07655	SM00852	Probable molybdopterin binding domain
CJJRM1285_RS07695	SM00047	Lysozyme subfamily 2
CJJRM1285_RS07725	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS07745	SM00796	Allophanate hydrolase subunit 1
CJJRM1285_RS07750	SM00797	Allophanate hydrolase subunit 2
CJJRM1285_RS07775	SM00829	Enoylreductase
CJJRM1285_RS07780	SM00487	DEAD-like helicases superfamily
CJJRM1285_RS07820	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CJJRM1285_RS07825	SM00422	helix_turn_helix, mercury resistance
CJJRM1285_RS07830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CJJRM1285_RS07835	SM00028	Tetratricopeptide repeats
CJJRM1285_RS07875	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CJJRM1285_RS07910	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS07915	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS07960	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS07975	SM00316	Ribosomal protein S1-like RNA-binding domain
CJJRM1285_RS07995	SM00363	S4 RNA-binding domain
CJJRM1285_RS07995	SM01390	CJJRM1285_RS07995
CJJRM1285_RS08000	SM00662	RNA polymerases D
CJJRM1285_RS08085	SM00937	CJJRM1285_RS08085
CJJRM1285_RS08105	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS08125	SM00478	endonuclease III
CJJRM1285_RS08125	SM00525	CJJRM1285_RS08125
CJJRM1285_RS08220	SM00358	Double-stranded RNA binding motif
CJJRM1285_RS08220	SM00535	Ribonuclease III family
CJJRM1285_RS08235	SM00400	zinc finger
CJJRM1285_RS08235	SM00493	CJJRM1285_RS08235
CJJRM1285_RS08260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CJJRM1285_RS08270	SM00861	Transketolase, pyrimidine binding domain
CJJRM1285_RS08280	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS08360	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS08430	SM01192	CJJRM1285_RS08430
CJJRM1285_RS08430	SM01193	CJJRM1285_RS08430
CJJRM1285_RS08435	SM00382	ATPases associated with a variety of cellular activities
CJJRM1285_RS08475	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS08475	SM00876	Biotin and Thiamin Synthesis associated domain
CJJRM1285_RS08480	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CJJRM1285_RS08480	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CJJRM1285_RS08480	SM00493	CJJRM1285_RS08480
CJJRM1285_RS08490	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CJJRM1285_RS08540	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CJJRM1285_RS08545	SM01374	CJJRM1285_RS08545
CJJRM1285_RS08565	SM00322	K homology RNA-binding domain
CJJRM1285_RS08580	SM01382	CJJRM1285_RS08580
CJJRM1285_RS08580	SM01383	CJJRM1285_RS08580
CJJRM1285_RS08600	SM01403	CJJRM1285_RS08600
CJJRM1285_RS08605	SM00363	S4 RNA-binding domain
CJJRM1285_RS08610	SM00849	Metallo-beta-lactamase superfamily
CJJRM1285_RS08615	SM00650	Ribosomal RNA adenine dimethylases
CJJRM1285_RS08625	SM00729	Elongator protein 3, MiaB family, Radical SAM
CJJRM1285_RS08670	SM01329	CJJRM1285_RS08670
CJJRM1285_RS08675	SM00917	LeuA allosteric (dimerisation) domain
