locus-tag class description CIGN_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CIGN_RS00005 PF00308 Bacterial dnaA protein CIGN_RS00005 PF11638 DnaA N-terminal domain CIGN_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CIGN_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CIGN_RS00010 PF02767 DNA polymerase III beta subunit, central domain CIGN_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIGN_RS00015 PF00204 DNA gyrase B CIGN_RS00015 PF01751 Toprim domain CIGN_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CIGN_RS00020 PF14489 QueF-like protein CIGN_RS00045 PF01351 Ribonuclease HII CIGN_RS00070 PF00113 Enolase, C-terminal TIM barrel domain CIGN_RS00070 PF03952 Enolase, N-terminal domain CIGN_RS00075 PF00154 recA bacterial DNA recombination protein CIGN_RS00080 PF00534 Glycosyl transferases group 1 CIGN_RS00085 PF00535 Glycosyl transferase family 2 CIGN_RS00090 PF01121 Dephospho-CoA kinase CIGN_RS00095 PF01042 Endoribonuclease L-PSP CIGN_RS00105 PF02769 AIR synthase related protein, C-terminal domain CIGN_RS00105 PF00586 AIR synthase related protein, N-terminal domain CIGN_RS00120 PF01261 Xylose isomerase-like TIM barrel CIGN_RS00140 PF10119 Predicted methyltransferase regulatory domain CIGN_RS00140 PF13847 Methyltransferase domain CIGN_RS00145 PF13183 4Fe-4S dicluster domain CIGN_RS00145 PF02754 Cysteine-rich domain CIGN_RS00145 PF02665 Nitrate reductase gamma subunit CIGN_RS00150 PF03807 NADP oxidoreductase coenzyme F420-dependent CIGN_RS00150 PF14748 Pyrroline-5-carboxylate reductase dimerisation CIGN_RS00160 PF06969 HemN C-terminal domain CIGN_RS00160 PF04055 Radical SAM superfamily CIGN_RS00165 PF10788 Protein of unknown function (DUF2603) CIGN_RS00170 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CIGN_RS00170 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CIGN_RS00175 PF00490 Delta-aminolevulinic acid dehydratase CIGN_RS00180 PF00925 GTP cyclohydrolase II CIGN_RS00185 PF02527 rRNA small subunit methyltransferase G CIGN_RS00200 PF01435 Peptidase family M48 CIGN_RS00210 PF03605 Anaerobic c4-dicarboxylate membrane transporter CIGN_RS00215 PF05992 SbmA/BacA-like family CIGN_RS00220 PF01632 Ribosomal protein L35 CIGN_RS00225 PF00453 Ribosomal protein L20 CIGN_RS00230 PF03167 Uracil DNA glycosylase superfamily CIGN_RS00240 PF03605 Anaerobic c4-dicarboxylate membrane transporter CIGN_RS00245 PF00206 Lyase CIGN_RS00245 PF10415 Fumarase C C-terminus CIGN_RS00250 PF01594 AI-2E family transporter CIGN_RS00255 PF02391 MoaE protein CIGN_RS00270 PF00330 Aconitase family (aconitate hydratase) CIGN_RS00280 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CIGN_RS00280 PF01565 FAD binding domain CIGN_RS00290 PF00005 ABC transporter CIGN_RS00305 PF01891 Cobalt uptake substrate-specific transmembrane region CIGN_RS00315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIGN_RS00315 PF18269 T3SS EscN ATPase C-terminal domain CIGN_RS00320 PF01227 GTP cyclohydrolase I CIGN_RS00325 PF05698 Bacterial trigger factor protein (TF) C-terminus CIGN_RS00325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIGN_RS00325 PF05697 Bacterial trigger factor protein (TF) CIGN_RS00330 PF00574 Clp protease CIGN_RS00340 PF01327 Polypeptide deformylase CIGN_RS00345 PF13335 Magnesium chelatase, subunit ChlI C-terminal CIGN_RS00345 PF01078 Magnesium chelatase, subunit ChlI CIGN_RS00350 PF01256 Carbohydrate kinase CIGN_RS00350 PF03853 YjeF-related protein N-terminus CIGN_RS00355 PF00551 Formyl transferase CIGN_RS00360 PF03741 Integral membrane protein TerC family CIGN_RS00390 PF00194 Eukaryotic-type carbonic anhydrase CIGN_RS00395 PF12161 HsdM N-terminal domain CIGN_RS00395 PF02384 N-6 DNA Methylase CIGN_RS00410 PF18766 SWI2/SNF2 ATPase CIGN_RS00410 PF12008 Type I restriction and modification enzyme - subunit R C terminal CIGN_RS00410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CIGN_RS00415 PF00080 Copper/zinc superoxide dismutase (SODC) CIGN_RS00455 PF13018 Extended Signal Peptide of Type V secretion system CIGN_RS00455 PF03797 Autotransporter beta-domain CIGN_RS00455 PF02395 Immunoglobulin A1 protease CIGN_RS00460 PF01027 Inhibitor of apoptosis-promoting Bax1 CIGN_RS00465 PF03840 Preprotein translocase SecG subunit CIGN_RS00470 PF01765 Ribosome recycling factor CIGN_RS00475 PF00156 Phosphoribosyl transferase domain CIGN_RS00485 PF08534 Redoxin CIGN_RS00490 PF05496 Holliday junction DNA helicase RuvB P-loop domain CIGN_RS00490 PF12002 MgsA AAA+ ATPase C terminal CIGN_RS00490 PF01661 Macro domain CIGN_RS00490 PF16193 AAA C-terminal domain CIGN_RS00500 PF00067 Cytochrome P450 CIGN_RS00510 PF10531 SLBB domain CIGN_RS00510 PF02563 Polysaccharide biosynthesis/export protein CIGN_RS00520 PF13419 Haloacid dehalogenase-like hydrolase CIGN_RS00525 PF14602 Hexapeptide repeat of succinyl-transferase CIGN_RS00525 PF00132 Bacterial transferase hexapeptide (six repeats) CIGN_RS00525 PF00483 Nucleotidyl transferase CIGN_RS00545 PF00483 Nucleotidyl transferase CIGN_RS00560 PF03498 Cytolethal distending toxin A/C domain CIGN_RS00565 PF03372 Endonuclease/Exonuclease/phosphatase family CIGN_RS00575 PF00483 Nucleotidyl transferase CIGN_RS00580 PF13580 SIS domain CIGN_RS00585 PF00288 GHMP kinases N terminal domain CIGN_RS00585 PF08544 GHMP kinases C terminal CIGN_RS00595 PF16363 GDP-mannose 4,6 dehydratase CIGN_RS00600 PF01370 NAD dependent epimerase/dehydratase family CIGN_RS00605 PF01370 NAD dependent epimerase/dehydratase family CIGN_RS00610 PF01370 NAD dependent epimerase/dehydratase family CIGN_RS00620 PF01370 NAD dependent epimerase/dehydratase family CIGN_RS00630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CIGN_RS00645 PF05159 Capsule polysaccharide biosynthesis protein CIGN_RS00650 PF05159 Capsule polysaccharide biosynthesis protein CIGN_RS00660 PF00005 ABC transporter CIGN_RS00685 PF00107 Zinc-binding dehydrogenase CIGN_RS00685 PF08240 Alcohol dehydrogenase GroES-like domain CIGN_RS00690 PF02040 Arsenical pump membrane protein CIGN_RS00730 PF00535 Glycosyl transferase family 2 CIGN_RS00735 PF01501 Glycosyl transferase family 8 CIGN_RS00735 PF00535 Glycosyl transferase family 2 CIGN_RS00740 PF00534 Glycosyl transferases group 1 CIGN_RS00745 PF00535 Glycosyl transferase family 2 CIGN_RS00755 PF02441 Flavoprotein CIGN_RS00760 PF03738 Glutathionylspermidine synthase preATP-grasp CIGN_RS00765 PF00375 Sodium:dicarboxylate symporter family CIGN_RS00800 PF01264 Chorismate synthase CIGN_RS00805 PF00035 Double-stranded RNA binding motif CIGN_RS00805 PF14622 Ribonuclease-III-like CIGN_RS00810 PF00075 RNase H CIGN_RS00820 PF01807 CHC2 zinc finger CIGN_RS00820 PF08275 DNA primase catalytic core, N-terminal domain CIGN_RS00835 PF02525 Flavodoxin-like fold CIGN_RS00840 PF12464 Maltose acetyltransferase CIGN_RS00840 PF14602 Hexapeptide repeat of succinyl-transferase CIGN_RS00840 PF00132 Bacterial transferase hexapeptide (six repeats) CIGN_RS00845 PF00107 Zinc-binding dehydrogenase CIGN_RS00845 PF08240 Alcohol dehydrogenase GroES-like domain CIGN_RS00890 PF01219 Prokaryotic diacylglycerol kinase CIGN_RS00900 PF00884 Sulfatase CIGN_RS00905 PF01554 MatE CIGN_RS00915 PF02335 Cytochrome c552 CIGN_RS00920 PF13416 Bacterial extracellular solute-binding protein CIGN_RS00925 PF07559 Flagellar basal body protein FlaE CIGN_RS00925 PF07196 Flagellin hook IN motif CIGN_RS00925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIGN_RS00925 PF00460 Flagella basal body rod protein CIGN_RS00950 PF07728 AAA domain (dynein-related subfamily) CIGN_RS00950 PF17868 AAA lid domain CIGN_RS00950 PF12592 Protein of unknown function (DUF3763) CIGN_RS00960 PF17868 AAA lid domain CIGN_RS00960 PF07728 AAA domain (dynein-related subfamily) CIGN_RS00960 PF12592 Protein of unknown function (DUF3763) CIGN_RS00965 PF01926 50S ribosome-binding GTPase CIGN_RS00965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CIGN_RS01020 PF00145 C-5 cytosine-specific DNA methylase CIGN_RS01030 PF00589 Phage integrase family CIGN_RS01030 PF13356 Arm DNA-binding domain CIGN_RS01065 PF07690 Major Facilitator Superfamily CIGN_RS01070 PF02511 Thymidylate synthase complementing protein CIGN_RS01075 PF00881 Nitroreductase family CIGN_RS01080 PF03144 Elongation factor Tu domain 2 CIGN_RS01080 PF00009 Elongation factor Tu GTP binding domain CIGN_RS01080 PF00679 Elongation factor G C-terminus CIGN_RS01090 PF03963 Flagellar hook capping protein - N-terminal region CIGN_RS01095 PF07559 Flagellar basal body protein FlaE CIGN_RS01095 PF00460 Flagella basal body rod protein CIGN_RS01095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIGN_RS01115 PF00920 Dehydratase family CIGN_RS01120 PF06965 Na+/H+ antiporter 1 CIGN_RS01125 PF17768 RecJ OB domain CIGN_RS01125 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CIGN_RS01125 PF01368 DHH family CIGN_RS01125 PF02272 DHHA1 domain CIGN_RS01130 PF06418 CTP synthase N-terminus CIGN_RS01130 PF00117 Glutamine amidotransferase class-I CIGN_RS01135 PF03797 Autotransporter beta-domain CIGN_RS01135 PF00082 Subtilase family CIGN_RS01135 PF12951 Passenger-associated-transport-repeat CIGN_RS01145 PF01032 FecCD transport family CIGN_RS01150 PF00005 ABC transporter CIGN_RS01155 PF01965 DJ-1/PfpI family CIGN_RS01160 PF03976 Polyphosphate kinase 2 (PPK2) CIGN_RS01165 PF00694 Aconitase C-terminal domain CIGN_RS01170 PF00180 Isocitrate/isopropylmalate dehydrogenase CIGN_RS01185 PF01743 Poly A polymerase head domain CIGN_RS01185 PF12627 Probable RNA and SrmB- binding site of polymerase A CIGN_RS01185 PF01966 HD domain CIGN_RS01190 PF02541 Ppx/GppA phosphatase family CIGN_RS01205 PF02384 N-6 DNA Methylase CIGN_RS01205 PF12161 HsdM N-terminal domain CIGN_RS01210 PF01420 Type I restriction modification DNA specificity domain CIGN_RS01215 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CIGN_RS01215 PF00271 Helicase conserved C-terminal domain CIGN_RS01215 PF08463 EcoEI R protein C-terminal CIGN_RS01215 PF04851 Type III restriction enzyme, res subunit CIGN_RS01230 PF03653 Uncharacterised protein family (UPF0093) CIGN_RS01240 PF01252 Signal peptidase (SPase) II CIGN_RS01245 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIGN_RS01245 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIGN_RS01245 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIGN_RS01245 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIGN_RS01250 PF01649 Ribosomal protein S20 CIGN_RS01255 PF00472 RF-1 domain CIGN_RS01255 PF03462 PCRF domain CIGN_RS01260 PF02659 Putative manganese efflux pump CIGN_RS01270 PF08019 Phosphoethanolamine transferase EptA/EptB CIGN_RS01270 PF00884 Sulfatase CIGN_RS01275 PF03372 Endonuclease/Exonuclease/phosphatase family CIGN_RS01285 PF00924 Mechanosensitive ion channel CIGN_RS01290 PF00484 Carbonic anhydrase CIGN_RS01295 PF00563 EAL domain CIGN_RS01310 PF00005 ABC transporter CIGN_RS01315 PF00950 ABC 3 transport family CIGN_RS01320 PF02719 Polysaccharide biosynthesis protein CIGN_RS01340 PF00842 Alanine racemase, C-terminal domain CIGN_RS01340 PF01168 Alanine racemase, N-terminal domain CIGN_RS01345 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CIGN_RS01345 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CIGN_RS01350 PF02621 Menaquinone biosynthesis CIGN_RS01370 PF03949 Malic enzyme, NAD binding domain CIGN_RS01370 PF00390 Malic enzyme, N-terminal domain CIGN_RS01370 PF01515 Phosphate acetyl/butaryl transferase CIGN_RS01375 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIGN_RS01385 PF06969 HemN C-terminal domain CIGN_RS01385 PF04055 Radical SAM superfamily CIGN_RS01395 PF04461 Protein of unknown function (DUF520) CIGN_RS01400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CIGN_RS01400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CIGN_RS01420 PF13288 DXP reductoisomerase C-terminal domain CIGN_RS01420 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CIGN_RS01420 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CIGN_RS01430 PF00814 Glycoprotease family CIGN_RS01460 PF06463 Molybdenum Cofactor Synthesis C CIGN_RS01460 PF04055 Radical SAM superfamily CIGN_RS01485 PF04452 RNA methyltransferase CIGN_RS01495 PF01367 5'-3' exonuclease, C-terminal SAM fold CIGN_RS01495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CIGN_RS01495 PF00476 DNA polymerase family A CIGN_RS01495 PF01612 3'-5' exonuclease CIGN_RS01500 PF01618 MotA/TolQ/ExbB proton channel family CIGN_RS01505 PF00691 OmpA family CIGN_RS01505 PF13677 Membrane MotB of proton-channel complex MotA/MotB CIGN_RS01510 PF00037 4Fe-4S binding domain CIGN_RS01515 PF00334 Nucleoside diphosphate kinase CIGN_RS01525 PF01783 Ribosomal L32p protein family CIGN_RS01530 PF02504 Fatty acid synthesis protein CIGN_RS01535 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIGN_RS01535 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIGN_RS01540 PF02660 Glycerol-3-phosphate acyltransferase CIGN_RS01550 PF00486 Transcriptional regulatory protein, C terminal CIGN_RS01550 PF00072 Response regulator receiver domain CIGN_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIGN_RS01555 PF00512 His Kinase A (phospho-acceptor) domain CIGN_RS01565 PF01103 Surface antigen CIGN_RS01565 PF07244 Surface antigen variable number repeat CIGN_RS01570 PF02153 Prephenate dehydrogenase CIGN_RS01570 PF01842 ACT domain CIGN_RS01580 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CIGN_RS01590 PF00288 GHMP kinases N terminal domain CIGN_RS01600 PF11987 Translation-initiation factor 2 CIGN_RS01600 PF00009 Elongation factor Tu GTP binding domain CIGN_RS01600 PF04760 Translation initiation factor IF-2, N-terminal region CIGN_RS01605 PF02033 Ribosome-binding factor A CIGN_RS01610 PF17384 RimP C-terminal SH3 domain CIGN_RS01610 PF02576 RimP N-terminal domain CIGN_RS01615 PF01872 RibD C-terminal domain CIGN_RS01615 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CIGN_RS01620 PF03641 Possible lysine decarboxylase CIGN_RS01630 PF01063 Amino-transferase class IV CIGN_RS01640 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CIGN_RS01640 PF01502 Phosphoribosyl-AMP cyclohydrolase CIGN_RS01655 PF08447 PAS fold CIGN_RS01655 PF13426 PAS domain CIGN_RS01655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS01660 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS01660 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS01660 PF07196 Flagellin hook IN motif CIGN_RS01665 PF03475 3-alpha domain CIGN_RS01665 PF03473 MOSC domain CIGN_RS01670 PF01343 Peptidase family S49 CIGN_RS01675 PF01979 Amidohydrolase family CIGN_RS01680 PF01220 Dehydroquinase class II CIGN_RS01685 PF00557 Metallopeptidase family M24 CIGN_RS01685 PF01321 Creatinase/Prolidase N-terminal domain CIGN_RS01690 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CIGN_RS01695 PF00448 SRP54-type protein, GTPase domain CIGN_RS01700 PF10609 NUBPL iron-transfer P-loop NTPase CIGN_RS01710 PF04545 Sigma-70, region 4 CIGN_RS01710 PF04539 Sigma-70 region 3 CIGN_RS01710 PF04542 Sigma-70 region 2 CIGN_RS01715 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CIGN_RS01715 PF02154 Flagellar motor switch protein FliM CIGN_RS01720 PF04509 CheC-like family CIGN_RS01720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CIGN_RS01725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS01725 PF00672 HAMP domain CIGN_RS01725 PF02743 Cache domain CIGN_RS01735 PF09335 SNARE associated Golgi protein CIGN_RS01740 PF01725 Ham1 family CIGN_RS01750 PF03544 Gram-negative bacterial TonB protein C-terminal CIGN_RS01755 PF03435 Saccharopine dehydrogenase NADP binding domain CIGN_RS01755 PF16653 Saccharopine dehydrogenase C-terminal domain CIGN_RS01760 PF01197 Ribosomal protein L31 CIGN_RS01765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CIGN_RS01770 PF00588 SpoU rRNA Methylase family CIGN_RS01770 PF08032 RNA 2'-O ribose methyltransferase substrate binding CIGN_RS01785 PF00155 Aminotransferase class I and II CIGN_RS01790 PF01842 ACT domain CIGN_RS01790 PF00742 Homoserine dehydrogenase CIGN_RS01790 PF03447 Homoserine dehydrogenase, NAD binding domain CIGN_RS01795 PF02021 Uncharacterised protein family UPF0102 CIGN_RS01800 PF00085 Thioredoxin CIGN_RS01805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIGN_RS01810 PF05173 Dihydrodipicolinate reductase, C-terminus CIGN_RS01810 PF01113 Dihydrodipicolinate reductase, N-terminus CIGN_RS01815 PF00156 Phosphoribosyl transferase domain CIGN_RS01820 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS01820 PF07196 Flagellin hook IN motif CIGN_RS01820 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS01825 PF00005 ABC transporter CIGN_RS01830 PF00005 ABC transporter CIGN_RS01835 PF01032 FecCD transport family CIGN_RS01880 PF01380 SIS domain CIGN_RS01890 PF01177 Asp/Glu/Hydantoin racemase CIGN_RS01895 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CIGN_RS01930 PF00578 AhpC/TSA family CIGN_RS01935 PF02677 Epoxyqueuosine reductase QueH CIGN_RS01940 PF07977 FabA-like domain CIGN_RS01945 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CIGN_RS01945 PF00132 Bacterial transferase hexapeptide (six repeats) CIGN_RS01950 PF06689 ClpX C4-type zinc finger CIGN_RS01950 PF10431 C-terminal, D2-small domain, of ClpB protein CIGN_RS01950 PF07724 AAA domain (Cdc48 subfamily) CIGN_RS01965 PF02142 MGS-like domain CIGN_RS01965 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CIGN_RS01965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIGN_RS01985 PF01975 Survival protein SurE CIGN_RS01990 PF02684 Lipid-A-disaccharide synthetase CIGN_RS01995 PF03449 Transcription elongation factor, N-terminal CIGN_RS01995 PF01272 Transcription elongation factor, GreA/GreB, C-term CIGN_RS02000 PF01118 Semialdehyde dehydrogenase, NAD binding domain CIGN_RS02000 PF02774 Semialdehyde dehydrogenase, dimerisation domain CIGN_RS02010 PF01584 CheW-like domain CIGN_RS02010 PF00072 Response regulator receiver domain CIGN_RS02015 PF01627 Hpt domain CIGN_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIGN_RS02015 PF02895 Signal transducing histidine kinase, homodimeric domain CIGN_RS02015 PF00072 Response regulator receiver domain CIGN_RS02015 PF01584 CheW-like domain CIGN_RS02020 PF01584 CheW-like domain CIGN_RS02030 PF00923 Transaldolase/Fructose-6-phosphate aldolase CIGN_RS02035 PF14693 Ribosomal protein TL5, C-terminal domain CIGN_RS02035 PF01386 Ribosomal L25p family CIGN_RS02040 PF01195 Peptidyl-tRNA hydrolase CIGN_RS02045 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CIGN_RS02050 PF01312 FlhB HrpN YscU SpaS Family CIGN_RS02060 PF00005 ABC transporter CIGN_RS02060 PF12848 ABC transporter CIGN_RS02065 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CIGN_RS02065 PF14602 Hexapeptide repeat of succinyl-transferase CIGN_RS02075 PF04509 CheC-like family CIGN_RS02075 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CIGN_RS02085 PF00290 Tryptophan synthase alpha chain CIGN_RS02090 PF00291 Pyridoxal-phosphate dependent enzyme CIGN_RS02095 PF00218 Indole-3-glycerol phosphate synthase CIGN_RS02095 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CIGN_RS02110 PF00117 Glutamine amidotransferase class-I CIGN_RS02110 PF00591 Glycosyl transferase family, a/b domain CIGN_RS02110 PF02885 Glycosyl transferase family, helical bundle domain CIGN_RS02115 PF04715 Anthranilate synthase component I, N terminal region CIGN_RS02115 PF00425 chorismate binding enzyme CIGN_RS02130 PF00528 Binding-protein-dependent transport system inner membrane component CIGN_RS02135 PF00005 ABC transporter CIGN_RS02135 PF08402 TOBE domain CIGN_RS02180 PF13393 Histidyl-tRNA synthetase CIGN_RS02185 PF00709 Adenylosuccinate synthetase CIGN_RS02205 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CIGN_RS02205 PF00117 Glutamine amidotransferase class-I CIGN_RS02215 PF08447 PAS fold CIGN_RS02215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS02220 PF00072 Response regulator receiver domain CIGN_RS02220 PF00486 Transcriptional regulatory protein, C terminal CIGN_RS02225 PF00115 Cytochrome C and Quinol oxidase polypeptide I CIGN_RS02240 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CIGN_RS02240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CIGN_RS02265 PF12705 PD-(D/E)XK nuclease superfamily CIGN_RS02270 PF13361 UvrD-like helicase C-terminal domain CIGN_RS02270 PF12705 PD-(D/E)XK nuclease superfamily CIGN_RS02270 PF00580 UvrD/REP helicase N-terminal domain CIGN_RS02275 PF00572 Ribosomal protein L13 CIGN_RS02280 PF00380 Ribosomal protein S9/S16 CIGN_RS02285 PF00691 OmpA family CIGN_RS02285 PF05736 OprF membrane domain CIGN_RS02290 PF00924 Mechanosensitive ion channel CIGN_RS02290 PF05552 Conserved TM helix CIGN_RS02295 PF13419 Haloacid dehalogenase-like hydrolase CIGN_RS02300 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CIGN_RS02300 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CIGN_RS02300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CIGN_RS02300 PF10371 Domain of unknown function CIGN_RS02300 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CIGN_RS02305 PF07196 Flagellin hook IN motif CIGN_RS02305 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS02305 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS02315 PF00871 Acetokinase family CIGN_RS02320 PF01515 Phosphate acetyl/butaryl transferase CIGN_RS02325 PF02107 Flagellar L-ring protein CIGN_RS02330 PF03631 Virulence factor BrkB CIGN_RS02335 PF01565 FAD binding domain CIGN_RS02335 PF02913 FAD linked oxidases, C-terminal domain CIGN_RS02345 PF10145 Phage-related minor tail protein CIGN_RS02345 PF01551 Peptidase family M23 CIGN_RS02345 PF01464 Transglycosylase SLT domain CIGN_RS02350 PF01769 Divalent cation transporter CIGN_RS02350 PF03448 MgtE intracellular N domain CIGN_RS02350 PF00571 CBS domain CIGN_RS02355 PF00293 NUDIX domain CIGN_RS02385 PF01243 Pyridoxamine 5'-phosphate oxidase CIGN_RS02390 PF01339 CheB methylesterase CIGN_RS02390 PF00072 Response regulator receiver domain CIGN_RS02395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIGN_RS02395 PF00512 His Kinase A (phospho-acceptor) domain CIGN_RS02395 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CIGN_RS02395 PF00672 HAMP domain CIGN_RS02395 PF00072 Response regulator receiver domain CIGN_RS02395 PF01627 Hpt domain CIGN_RS02405 PF00468 Ribosomal protein L34 CIGN_RS02410 PF00825 Ribonuclease P CIGN_RS02415 PF01809 Putative membrane protein insertion efficiency factor CIGN_RS02420 PF14849 YidC periplasmic domain CIGN_RS02420 PF02096 60Kd inner membrane protein CIGN_RS02430 PF12631 MnmE helical domain CIGN_RS02430 PF10396 GTP-binding protein TrmE N-terminus CIGN_RS02430 PF01926 50S ribosome-binding GTPase CIGN_RS02435 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CIGN_RS02435 PF00586 AIR synthase related protein, N-terminal domain CIGN_RS02435 PF02769 AIR synthase related protein, C-terminal domain CIGN_RS02440 PF05099 Tellurite resistance protein TerB CIGN_RS02440 PF00226 DnaJ domain CIGN_RS02445 PF02142 MGS-like domain CIGN_RS02445 PF01808 AICARFT/IMPCHase bienzyme CIGN_RS02450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS02450 PF00672 HAMP domain CIGN_RS02450 PF02743 Cache domain CIGN_RS02455 PF03061 Thioesterase superfamily CIGN_RS02460 PF01545 Cation efflux family CIGN_RS02460 PF16916 Dimerisation domain of Zinc Transporter CIGN_RS02465 PF02583 Metal-sensitive transcriptional repressor CIGN_RS02480 PF01063 Amino-transferase class IV CIGN_RS02505 PF13247 4Fe-4S dicluster domain CIGN_RS02530 PF01795 MraW methylase family CIGN_RS02545 PF02491 SHS2 domain inserted in FTSA CIGN_RS02550 PF12327 FtsZ family, C-terminal domain CIGN_RS02550 PF00091 Tubulin/FtsZ family, GTPase domain CIGN_RS02560 PF03616 Sodium/glutamate symporter CIGN_RS02570 PF05970 PIF1-like helicase CIGN_RS02570 PF02689 Helicase CIGN_RS02585 PF02810 SEC-C motif CIGN_RS02585 PF01043 SecA preprotein cross-linking domain CIGN_RS02585 PF07516 SecA Wing and Scaffold domain CIGN_RS02585 PF07517 SecA DEAD-like domain CIGN_RS02590 PF02687 FtsX-like permease family CIGN_RS02590 PF12704 MacB-like periplasmic core domain CIGN_RS02595 PF02653 Branched-chain amino acid transport system / permease component CIGN_RS02600 PF11862 Domain of unknown function (DUF3382) CIGN_RS02600 PF02653 Branched-chain amino acid transport system / permease component CIGN_RS02605 PF12399 Branched-chain amino acid ATP-binding cassette transporter CIGN_RS02605 PF00005 ABC transporter CIGN_RS02610 PF00005 ABC transporter CIGN_RS02625 PF02699 Preprotein translocase subunit CIGN_RS02630 PF02355 Protein export membrane protein CIGN_RS02635 PF02355 Protein export membrane protein CIGN_RS02635 PF07549 SecD/SecF GG Motif CIGN_RS02645 PF13603 Leucyl-tRNA synthetase, Domain 2 CIGN_RS02645 PF09334 tRNA synthetases class I (M) CIGN_RS02645 PF00133 tRNA synthetases class I (I, L, M and V) CIGN_RS02660 PF08245 Mur ligase middle domain CIGN_RS02665 PF01551 Peptidase family M23 CIGN_RS02665 PF04225 Opacity-associated protein A LysM-like domain CIGN_RS02675 PF00270 DEAD/DEAH box helicase CIGN_RS02675 PF03461 TRCF domain CIGN_RS02675 PF17757 UvrB interaction domain CIGN_RS02675 PF02559 CarD-like/TRCF domain CIGN_RS02675 PF00271 Helicase conserved C-terminal domain CIGN_RS02700 PF13380 CoA binding domain CIGN_RS02705 PF13291 ACT domain CIGN_RS02705 PF00291 Pyridoxal-phosphate dependent enzyme CIGN_RS02710 PF01541 GIY-YIG catalytic domain CIGN_RS02710 PF02151 UvrB/uvrC motif CIGN_RS02710 PF08459 UvrC Helix-hairpin-helix N-terminal CIGN_RS02720 PF00117 Glutamine amidotransferase class-I CIGN_RS02720 PF00958 GMP synthase C terminal domain CIGN_RS02720 PF02540 NAD synthase CIGN_RS02730 PF02673 Bacitracin resistance protein BacA CIGN_RS02735 PF02581 Thiamine monophosphate synthase CIGN_RS02740 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIGN_RS02745 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIGN_RS02750 PF00005 ABC transporter CIGN_RS02755 PF00528 Binding-protein-dependent transport system inner membrane component CIGN_RS02765 PF00460 Flagella basal body rod protein CIGN_RS02765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIGN_RS02770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIGN_RS02770 PF00460 Flagella basal body rod protein CIGN_RS02780 PF03062 MBOAT, membrane-bound O-acyltransferase family CIGN_RS02785 PF04371 Porphyromonas-type peptidyl-arginine deiminase CIGN_RS02790 PF00795 Carbon-nitrogen hydrolase CIGN_RS02800 PF08946 Osmosensory transporter coiled coil CIGN_RS02800 PF00083 Sugar (and other) transporter CIGN_RS02805 PF16326 ABC transporter C-terminal domain CIGN_RS02805 PF00005 ABC transporter CIGN_RS02805 PF12848 ABC transporter CIGN_RS02810 PF00209 Sodium:neurotransmitter symporter family CIGN_RS02815 PF01435 Peptidase family M48 CIGN_RS02815 PF16491 CAAX prenyl protease N-terminal, five membrane helices CIGN_RS02820 PF17827 PrmC N-terminal domain CIGN_RS02820 PF05175 Methyltransferase small domain CIGN_RS02830 PF03061 Thioesterase superfamily CIGN_RS02850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CIGN_RS02850 PF02844 Phosphoribosylglycinamide synthetase, N domain CIGN_RS02850 PF02843 Phosphoribosylglycinamide synthetase, C domain CIGN_RS02860 PF04453 LPS transport system D CIGN_RS02860 PF03968 OstA-like protein CIGN_RS02870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CIGN_RS02870 PF00013 KH domain CIGN_RS02870 PF03725 3' exoribonuclease family, domain 2 CIGN_RS02870 PF01138 3' exoribonuclease family, domain 1 CIGN_RS02870 PF00575 S1 RNA binding domain CIGN_RS02880 PF01230 HIT domain CIGN_RS02885 PF01409 tRNA synthetases class II core domain (F) CIGN_RS02885 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CIGN_RS02890 PF01588 Putative tRNA binding domain CIGN_RS02890 PF03147 Ferredoxin-fold anticodon binding domain CIGN_RS02890 PF03484 tRNA synthetase B5 domain CIGN_RS02890 PF03483 B3/4 domain CIGN_RS02890 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CIGN_RS02895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CIGN_RS02900 PF02401 LytB protein CIGN_RS02905 PF00575 S1 RNA binding domain CIGN_RS02915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CIGN_RS02915 PF01842 ACT domain CIGN_RS02915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CIGN_RS02920 PF09285 Elongation factor P, C-terminal CIGN_RS02920 PF08207 Elongation factor P (EF-P) KOW-like domain CIGN_RS02920 PF01132 Elongation factor P (EF-P) OB domain CIGN_RS02925 PF02630 SCO1/SenC CIGN_RS02930 PF01098 Cell cycle protein CIGN_RS02935 PF01479 S4 domain CIGN_RS02935 PF00849 RNA pseudouridylate synthase CIGN_RS02945 PF02390 Putative methyltransferase CIGN_RS02950 PF09383 NIL domain CIGN_RS02950 PF00005 ABC transporter CIGN_RS02965 PF00696 Amino acid kinase family CIGN_RS02970 PF01192 RNA polymerase Rpb6 CIGN_RS02975 PF02824 TGS domain CIGN_RS02975 PF04607 Region found in RelA / SpoT proteins CIGN_RS02975 PF13291 ACT domain CIGN_RS02980 PF00579 tRNA synthetases class I (W and Y) CIGN_RS02990 PF01520 N-acetylmuramoyl-L-alanine amidase CIGN_RS02990 PF11741 AMIN domain CIGN_RS02995 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CIGN_RS02995 PF01266 FAD dependent oxidoreductase CIGN_RS03005 PF00350 Dynamin family CIGN_RS03010 PF00350 Dynamin family CIGN_RS03015 PF02600 Disulfide bond formation protein DsbB CIGN_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIGN_RS03025 PF00512 His Kinase A (phospho-acceptor) domain CIGN_RS03030 PF00483 Nucleotidyl transferase CIGN_RS03035 PF00342 Phosphoglucose isomerase CIGN_RS03040 PF00210 Ferritin-like domain CIGN_RS03045 PF04264 YceI-like domain CIGN_RS03065 PF01142 tRNA pseudouridine synthase D (TruD) CIGN_RS03070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS03070 PF12729 Four helix bundle sensory module for signal transduction CIGN_RS03070 PF00672 HAMP domain CIGN_RS03075 PF03150 Di-haem cytochrome c peroxidase CIGN_RS03075 PF00034 Cytochrome c CIGN_RS03075 PF14376 Haem-binding domain CIGN_RS03090 PF02561 Flagellar protein FliS CIGN_RS03095 PF07195 Flagellar hook-associated protein 2 C-terminus CIGN_RS03095 PF07196 Flagellin hook IN motif CIGN_RS03095 PF02465 Flagellar hook-associated protein 2 N-terminus CIGN_RS03115 PF09186 Domain of unknown function (DUF1949) CIGN_RS03115 PF01205 Uncharacterized protein family UPF0029 CIGN_RS03120 PF07196 Flagellin hook IN motif CIGN_RS03120 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS03120 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS03135 PF04376 Arginine-tRNA-protein transferase, N terminus CIGN_RS03135 PF04377 Arginine-tRNA-protein transferase, C terminus CIGN_RS03145 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CIGN_RS03150 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CIGN_RS03155 PF01384 Phosphate transporter family CIGN_RS03160 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS03160 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS03165 PF09397 Ftsk gamma domain CIGN_RS03165 PF17854 FtsK alpha domain CIGN_RS03165 PF01580 FtsK/SpoIIIE family CIGN_RS03180 PF00348 Polyprenyl synthetase CIGN_RS03185 PF01488 Shikimate / quinate 5-dehydrogenase CIGN_RS03185 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CIGN_RS03185 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CIGN_RS03190 PF04073 Aminoacyl-tRNA editing domain CIGN_RS03190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIGN_RS03190 PF03129 Anticodon binding domain CIGN_RS03200 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CIGN_RS03200 PF03900 Porphobilinogen deaminase, C-terminal domain CIGN_RS03205 PF01578 Cytochrome C assembly protein CIGN_RS03205 PF05140 ResB-like family CIGN_RS03215 PF11791 Aconitate B N-terminal domain CIGN_RS03215 PF06434 Aconitate hydratase 2 N-terminus CIGN_RS03215 PF00330 Aconitase family (aconitate hydratase) CIGN_RS03225 PF04551 GcpE protein CIGN_RS03230 PF03796 DnaB-like helicase C terminal domain CIGN_RS03230 PF00772 DnaB-like helicase N terminal domain CIGN_RS03240 PF10576 Iron-sulfur binding domain of endonuclease III CIGN_RS03240 PF00730 HhH-GPD superfamily base excision DNA repair protein CIGN_RS03240 PF00633 Helix-hairpin-helix motif CIGN_RS03250 PF01116 Fructose-bisphosphate aldolase class-II CIGN_RS03275 PF00258 Flavodoxin CIGN_RS03280 PF02664 S-Ribosylhomocysteinase (LuxS) CIGN_RS03305 PF01580 FtsK/SpoIIIE family CIGN_RS03305 PF09397 Ftsk gamma domain CIGN_RS03305 PF17854 FtsK alpha domain CIGN_RS03315 PF00350 Dynamin family CIGN_RS03320 PF00350 Dynamin family CIGN_RS03340 PF18073 Rubredoxin metal binding domain CIGN_RS03345 PF00448 SRP54-type protein, GTPase domain CIGN_RS03350 PF00578 AhpC/TSA family CIGN_RS03355 PF01812 5-formyltetrahydrofolate cyclo-ligase family CIGN_RS03360 PF01966 HD domain CIGN_RS03360 PF12072 Domain of unknown function (DUF3552) CIGN_RS03405 PF02535 ZIP Zinc transporter CIGN_RS03410 PF01312 FlhB HrpN YscU SpaS Family CIGN_RS03435 PF00202 Aminotransferase class-III CIGN_RS03445 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CIGN_RS03445 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CIGN_RS03450 PF10502 Signal peptidase, peptidase S26 CIGN_RS03455 PF02502 Ribose/Galactose Isomerase CIGN_RS03465 PF00156 Phosphoribosyl transferase domain CIGN_RS03475 PF00883 Cytosol aminopeptidase family, catalytic domain CIGN_RS03480 PF06071 Protein of unknown function (DUF933) CIGN_RS03480 PF01926 50S ribosome-binding GTPase CIGN_RS03485 PF00384 Molybdopterin oxidoreductase CIGN_RS03485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CIGN_RS03485 PF01568 Molydopterin dinucleotide binding domain CIGN_RS03490 PF12800 4Fe-4S binding domain CIGN_RS03490 PF12838 4Fe-4S dicluster domain CIGN_RS03495 PF13237 4Fe-4S dicluster domain CIGN_RS03495 PF12801 4Fe-4S binding domain CIGN_RS03500 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CIGN_RS03520 PF01416 tRNA pseudouridine synthase CIGN_RS03530 PF06750 Bacterial Peptidase A24 N-terminal domain CIGN_RS03530 PF01478 Type IV leader peptidase family CIGN_RS03535 PF01255 Putative undecaprenyl diphosphate synthase CIGN_RS03545 PF02441 Flavoprotein CIGN_RS03545 PF04127 DNA / pantothenate metabolism flavoprotein CIGN_RS03550 PF00132 Bacterial transferase hexapeptide (six repeats) CIGN_RS03550 PF12804 MobA-like NTP transferase domain CIGN_RS03560 PF02687 FtsX-like permease family CIGN_RS03560 PF12704 MacB-like periplasmic core domain CIGN_RS03560 PF00005 ABC transporter CIGN_RS03580 PF00486 Transcriptional regulatory protein, C terminal CIGN_RS03580 PF00072 Response regulator receiver domain CIGN_RS03585 PF17820 PDZ domain CIGN_RS03585 PF13180 PDZ domain CIGN_RS03590 PF00226 DnaJ domain CIGN_RS03590 PF00684 DnaJ central domain CIGN_RS03590 PF01556 DnaJ C terminal domain CIGN_RS03595 PF13411 MerR HTH family regulatory protein CIGN_RS03600 PF02254 TrkA-N domain CIGN_RS03600 PF00999 Sodium/hydrogen exchanger family CIGN_RS03605 PF02080 TrkA-C domain CIGN_RS03605 PF03471 Transporter associated domain CIGN_RS03605 PF00999 Sodium/hydrogen exchanger family CIGN_RS03610 PF01925 Sulfite exporter TauE/SafE CIGN_RS03615 PF00119 ATP synthase A chain CIGN_RS03625 PF02581 Thiamine monophosphate synthase CIGN_RS03630 PF02637 GatB domain CIGN_RS03630 PF02934 GatB/GatE catalytic domain CIGN_RS03635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CIGN_RS03635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CIGN_RS03640 PF00933 Glycosyl hydrolase family 3 N terminal domain CIGN_RS03650 PF00892 EamA-like transporter family CIGN_RS03655 PF00005 ABC transporter CIGN_RS03660 PF00528 Binding-protein-dependent transport system inner membrane component CIGN_RS03665 PF00497 Bacterial extracellular solute-binding proteins, family 3 CIGN_RS03670 PF01066 CDP-alcohol phosphatidyltransferase CIGN_RS03680 PF00701 Dihydrodipicolinate synthetase family CIGN_RS03685 PF00675 Insulinase (Peptidase family M16) CIGN_RS03685 PF05193 Peptidase M16 inactive domain CIGN_RS03690 PF01180 Dihydroorotate dehydrogenase CIGN_RS03705 PF00005 ABC transporter CIGN_RS03705 PF00664 ABC transporter transmembrane region CIGN_RS03710 PF09190 DALR domain CIGN_RS03710 PF01406 tRNA synthetases class I (C) catalytic domain CIGN_RS03715 PF03023 Lipid II flippase MurJ CIGN_RS03720 PF00892 EamA-like transporter family CIGN_RS03725 PF02082 Transcriptional regulator CIGN_RS03730 PF00771 FHIPEP family CIGN_RS03750 PF01025 GrpE CIGN_RS03755 PF00012 Hsp70 protein CIGN_RS03760 PF06969 HemN C-terminal domain CIGN_RS03760 PF04055 Radical SAM superfamily CIGN_RS03765 PF00293 NUDIX domain CIGN_RS03770 PF00696 Amino acid kinase family CIGN_RS03770 PF01842 ACT domain CIGN_RS03770 PF13840 ACT domain CIGN_RS03785 PF00809 Pterin binding enzyme CIGN_RS03790 PF12826 Helix-hairpin-helix motif CIGN_RS03790 PF01653 NAD-dependent DNA ligase adenylation domain CIGN_RS03790 PF00533 BRCA1 C Terminus (BRCT) domain CIGN_RS03790 PF03120 NAD-dependent DNA ligase OB-fold domain CIGN_RS03795 PF01479 S4 domain CIGN_RS03795 PF01728 FtsJ-like methyltransferase CIGN_RS03800 PF06574 FAD synthetase CIGN_RS03800 PF01687 Riboflavin kinase CIGN_RS03805 PF13847 Methyltransferase domain CIGN_RS03810 PF00199 Catalase CIGN_RS03810 PF06628 Catalase-related immune-responsive CIGN_RS03815 PF00023 Ankyrin repeat CIGN_RS03815 PF12796 Ankyrin repeats (3 copies) CIGN_RS03825 PF00291 Pyridoxal-phosphate dependent enzyme CIGN_RS03830 PF02082 Transcriptional regulator CIGN_RS03835 PF01053 Cys/Met metabolism PLP-dependent enzyme CIGN_RS03845 PF00764 Arginosuccinate synthase CIGN_RS03850 PF18644 Phage integrase SAM-like domain CIGN_RS03850 PF00589 Phage integrase family CIGN_RS03855 PF01098 Cell cycle protein CIGN_RS03860 PF04101 Glycosyltransferase family 28 C-terminal domain CIGN_RS03860 PF03033 Glycosyltransferase family 28 N-terminal domain CIGN_RS03865 PF00216 Bacterial DNA-binding protein CIGN_RS03870 PF01479 S4 domain CIGN_RS03880 PF12399 Branched-chain amino acid ATP-binding cassette transporter CIGN_RS03880 PF00005 ABC transporter CIGN_RS03885 PF04552 Sigma-54, DNA binding domain CIGN_RS03885 PF00309 Sigma-54 factor, Activator interacting domain (AID) CIGN_RS03885 PF04963 Sigma-54 factor, core binding domain CIGN_RS03890 PF01761 3-dehydroquinate synthase CIGN_RS03900 PF00919 Uncharacterized protein family UPF0004 CIGN_RS03900 PF04055 Radical SAM superfamily CIGN_RS03905 PF17862 AAA+ lid domain CIGN_RS03905 PF00004 ATPase family associated with various cellular activities (AAA) CIGN_RS03905 PF01434 Peptidase family M41 CIGN_RS03910 PF00994 Probable molybdopterin binding domain CIGN_RS03920 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CIGN_RS03920 PF00925 GTP cyclohydrolase II CIGN_RS03925 PF01926 50S ribosome-binding GTPase CIGN_RS03925 PF07650 KH domain CIGN_RS03930 PF07724 AAA domain (Cdc48 subfamily) CIGN_RS03930 PF10431 C-terminal, D2-small domain, of ClpB protein CIGN_RS03935 PF00227 Proteasome subunit CIGN_RS03940 PF03948 Ribosomal protein L9, C-terminal domain CIGN_RS03940 PF01281 Ribosomal protein L9, N-terminal domain CIGN_RS03945 PF00288 GHMP kinases N terminal domain CIGN_RS03950 PF02599 Global regulator protein family CIGN_RS03955 PF01509 TruB family pseudouridylate synthase (N terminal domain) CIGN_RS03960 PF13361 UvrD-like helicase C-terminal domain CIGN_RS03960 PF00580 UvrD/REP helicase N-terminal domain CIGN_RS03965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CIGN_RS03975 PF08439 Oligopeptidase F CIGN_RS03975 PF01432 Peptidase family M3 CIGN_RS03980 PF00375 Sodium:dicarboxylate symporter family CIGN_RS03985 PF00438 S-adenosylmethionine synthetase, N-terminal domain CIGN_RS03985 PF02772 S-adenosylmethionine synthetase, central domain CIGN_RS03985 PF02773 S-adenosylmethionine synthetase, C-terminal domain CIGN_RS03990 PF11412 Disulphide bond corrector protein DsbC CIGN_RS03990 PF02683 Cytochrome C biogenesis protein transmembrane region CIGN_RS03990 PF00085 Thioredoxin CIGN_RS03995 PF17773 UPF0176 acylphosphatase like domain CIGN_RS03995 PF00581 Rhodanese-like domain CIGN_RS04005 PF13419 Haloacid dehalogenase-like hydrolase CIGN_RS04010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CIGN_RS04010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CIGN_RS04010 PF00205 Thiamine pyrophosphate enzyme, central domain CIGN_RS04015 PF10369 Small subunit of acetolactate synthase CIGN_RS04020 PF00132 Bacterial transferase hexapeptide (six repeats) CIGN_RS04020 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CIGN_RS04025 PF13089 Polyphosphate kinase N-terminal domain CIGN_RS04025 PF17941 Polyphosphate kinase C-terminal domain 1 CIGN_RS04025 PF13090 Polyphosphate kinase C-terminal domain 2 CIGN_RS04025 PF02503 Polyphosphate kinase middle domain CIGN_RS04030 PF01717 Cobalamin-independent synthase, Catalytic domain CIGN_RS04030 PF08267 Cobalamin-independent synthase, N-terminal domain CIGN_RS04045 PF00120 Glutamine synthetase, catalytic domain CIGN_RS04045 PF03951 Glutamine synthetase, beta-Grasp domain CIGN_RS04050 PF02811 PHP domain CIGN_RS04065 PF01136 Peptidase family U32 CIGN_RS04070 PF00731 AIR carboxylase CIGN_RS04080 PF02091 Glycyl-tRNA synthetase alpha subunit CIGN_RS04085 PF01784 NIF3 (NGG1p interacting factor 3) CIGN_RS04095 PF02390 Putative methyltransferase CIGN_RS04095 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CIGN_RS04100 PF00849 RNA pseudouridylate synthase CIGN_RS04105 PF01702 Queuine tRNA-ribosyltransferase CIGN_RS04115 PF13784 Fic/DOC family N-terminal CIGN_RS04115 PF02661 Fic/DOC family CIGN_RS04120 PF02384 N-6 DNA Methylase CIGN_RS04120 PF12161 HsdM N-terminal domain CIGN_RS04125 PF04851 Type III restriction enzyme, res subunit CIGN_RS04125 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CIGN_RS04125 PF00271 Helicase conserved C-terminal domain CIGN_RS04125 PF08463 EcoEI R protein C-terminal CIGN_RS04135 PF00106 short chain dehydrogenase CIGN_RS04140 PF05958 tRNA (Uracil-5-)-methyltransferase CIGN_RS04150 PF01648 4'-phosphopantetheinyl transferase superfamily CIGN_RS04155 PF03748 Flagellar basal body-associated protein FliL CIGN_RS04160 PF01557 Fumarylacetoacetate (FAA) hydrolase family CIGN_RS04165 PF00202 Aminotransferase class-III CIGN_RS04170 PF03458 UPF0126 domain CIGN_RS04175 PF00258 Flavodoxin CIGN_RS04175 PF00667 FAD binding domain CIGN_RS04175 PF00175 Oxidoreductase NAD-binding domain CIGN_RS04185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CIGN_RS04185 PF00205 Thiamine pyrophosphate enzyme, central domain CIGN_RS04185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CIGN_RS04190 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CIGN_RS04190 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CIGN_RS04190 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CIGN_RS04200 PF00056 lactate/malate dehydrogenase, NAD binding domain CIGN_RS04200 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CIGN_RS04205 PF03971 Monomeric isocitrate dehydrogenase CIGN_RS04215 PF04305 Protein of unknown function (DUF455) CIGN_RS04230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CIGN_RS04230 PF14579 Helix-hairpin-helix motif CIGN_RS04230 PF02811 PHP domain CIGN_RS04230 PF07733 Bacterial DNA polymerase III alpha NTPase domain CIGN_RS04230 PF00929 Exonuclease CIGN_RS04235 PF00834 Ribulose-phosphate 3 epimerase family CIGN_RS04240 PF02163 Peptidase family M50 CIGN_RS04240 PF17820 PDZ domain CIGN_RS04245 PF01168 Alanine racemase, N-terminal domain CIGN_RS04250 PF02861 Clp amino terminal domain, pathogenicity island component CIGN_RS04250 PF00004 ATPase family associated with various cellular activities (AAA) CIGN_RS04250 PF10431 C-terminal, D2-small domain, of ClpB protein CIGN_RS04250 PF17871 AAA lid domain CIGN_RS04250 PF07724 AAA domain (Cdc48 subfamily) CIGN_RS04255 PF03572 Peptidase family S41 CIGN_RS04255 PF13180 PDZ domain CIGN_RS04260 PF01259 SAICAR synthetase CIGN_RS04265 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CIGN_RS04280 PF01553 Acyltransferase CIGN_RS04285 PF09335 SNARE associated Golgi protein CIGN_RS04295 PF00813 FliP family CIGN_RS04300 PF02190 ATP-dependent protease La (LON) substrate-binding domain CIGN_RS04300 PF00004 ATPase family associated with various cellular activities (AAA) CIGN_RS04300 PF05362 Lon protease (S16) C-terminal proteolytic domain CIGN_RS04305 PF13525 Outer membrane lipoprotein CIGN_RS04310 PF02623 FliW protein CIGN_RS04330 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CIGN_RS04330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CIGN_RS04340 PF07687 Peptidase dimerisation domain CIGN_RS04340 PF01546 Peptidase family M20/M25/M40 CIGN_RS04350 PF08003 Protein of unknown function (DUF1698) CIGN_RS04355 PF01008 Initiation factor 2 subunit family CIGN_RS04355 PF03061 Thioesterase superfamily CIGN_RS04365 PF02540 NAD synthase CIGN_RS04370 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CIGN_RS04375 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CIGN_RS04380 PF00696 Amino acid kinase family CIGN_RS04385 PF00291 Pyridoxal-phosphate dependent enzyme CIGN_RS04390 PF02348 Cytidylyltransferase CIGN_RS04395 PF00990 Diguanylate cyclase, GGDEF domain CIGN_RS04400 PF00072 Response regulator receiver domain CIGN_RS04400 PF00990 Diguanylate cyclase, GGDEF domain CIGN_RS04405 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CIGN_RS04405 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CIGN_RS04410 PF13361 UvrD-like helicase C-terminal domain CIGN_RS04410 PF00580 UvrD/REP helicase N-terminal domain CIGN_RS04425 PF00183 Hsp90 protein CIGN_RS04430 PF02652 L-lactate permease CIGN_RS04435 PF02754 Cysteine-rich domain CIGN_RS04440 PF13183 4Fe-4S dicluster domain CIGN_RS04440 PF11870 Domain of unknown function (DUF3390) CIGN_RS04440 PF02589 LUD domain CIGN_RS04445 PF02589 LUD domain CIGN_RS04450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIGN_RS04455 PF00486 Transcriptional regulatory protein, C terminal CIGN_RS04455 PF00072 Response regulator receiver domain CIGN_RS04465 PF01476 LysM domain CIGN_RS04465 PF08525 Opacity-associated protein A N-terminal motif CIGN_RS04465 PF01551 Peptidase family M23 CIGN_RS04480 PF02092 Glycyl-tRNA synthetase beta subunit CIGN_RS04495 PF00588 SpoU rRNA Methylase family CIGN_RS04500 PF00551 Formyl transferase CIGN_RS04500 PF01842 ACT domain CIGN_RS04505 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CIGN_RS04505 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CIGN_RS04505 PF01189 16S rRNA methyltransferase RsmB/F CIGN_RS04510 PF03652 Holliday junction resolvase CIGN_RS04520 PF04748 Divergent polysaccharide deacetylase CIGN_RS04525 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CIGN_RS04525 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CIGN_RS04535 PF00773 RNB domain CIGN_RS04545 PF01250 Ribosomal protein S6 CIGN_RS04550 PF00436 Single-strand binding protein family CIGN_RS04555 PF01084 Ribosomal protein S18 CIGN_RS04570 PF00226 DnaJ domain CIGN_RS04570 PF01556 DnaJ C terminal domain CIGN_RS04570 PF00684 DnaJ central domain CIGN_RS04575 PF00072 Response regulator receiver domain CIGN_RS04575 PF00486 Transcriptional regulatory protein, C terminal CIGN_RS04585 PF02132 RecR protein CIGN_RS04585 PF13662 Toprim domain CIGN_RS04590 PF08501 Shikimate dehydrogenase substrate binding domain CIGN_RS04605 PF00464 Serine hydroxymethyltransferase CIGN_RS04610 PF01336 OB-fold nucleic acid binding domain CIGN_RS04610 PF00152 tRNA synthetases class II (D, K and N) CIGN_RS04615 PF01475 Ferric uptake regulator family CIGN_RS04630 PF04354 ZipA, C-terminal FtsZ-binding domain CIGN_RS04635 PF15437 Plasminogen-binding protein pgbA C-terminal CIGN_RS04645 PF03309 Type III pantothenate kinase CIGN_RS04650 PF01634 ATP phosphoribosyltransferase CIGN_RS04655 PF00149 Calcineurin-like phosphoesterase CIGN_RS04660 PF02666 Phosphatidylserine decarboxylase CIGN_RS04665 PF01435 Peptidase family M48 CIGN_RS04670 PF01474 Class-II DAHP synthetase family CIGN_RS04675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CIGN_RS04680 PF03453 MoeA N-terminal region (domain I and II) CIGN_RS04680 PF03454 MoeA C-terminal region (domain IV) CIGN_RS04680 PF00994 Probable molybdopterin binding domain CIGN_RS04695 PF01467 Cytidylyltransferase-like CIGN_RS04700 PF02223 Thymidylate kinase CIGN_RS04705 PF03129 Anticodon binding domain CIGN_RS04705 PF13393 Histidyl-tRNA synthetase CIGN_RS04710 PF17944 Arginine decarboxylase C-terminal helical extension CIGN_RS04710 PF17810 Arginine decarboxylase helical bundle domain CIGN_RS04710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CIGN_RS04715 PF06426 Serine acetyltransferase, N-terminal CIGN_RS04715 PF00132 Bacterial transferase hexapeptide (six repeats) CIGN_RS04720 PF00155 Aminotransferase class I and II CIGN_RS04725 PF01668 SmpB protein CIGN_RS04735 PF02617 ATP-dependent Clp protease adaptor protein ClpS CIGN_RS04740 PF17871 AAA lid domain CIGN_RS04740 PF10431 C-terminal, D2-small domain, of ClpB protein CIGN_RS04740 PF02861 Clp amino terminal domain, pathogenicity island component CIGN_RS04740 PF07724 AAA domain (Cdc48 subfamily) CIGN_RS04740 PF00004 ATPase family associated with various cellular activities (AAA) CIGN_RS04745 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CIGN_RS04750 PF00460 Flagella basal body rod protein CIGN_RS04755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIGN_RS04755 PF00460 Flagella basal body rod protein CIGN_RS04760 PF02049 Flagellar hook-basal body complex protein FliE CIGN_RS04765 PF03717 Penicillin-binding Protein dimerisation domain CIGN_RS04765 PF00905 Penicillin binding protein transpeptidase domain CIGN_RS04770 PF04055 Radical SAM superfamily CIGN_RS04775 PF00860 Permease family CIGN_RS04800 PF08245 Mur ligase middle domain CIGN_RS04800 PF02875 Mur ligase family, glutamate ligase domain CIGN_RS04815 PF01820 D-ala D-ala ligase N-terminus CIGN_RS04815 PF07478 D-ala D-ala ligase C-terminus CIGN_RS04820 PF07499 RuvA, C-terminal domain CIGN_RS04820 PF01330 RuvA N terminal domain CIGN_RS04830 PF00072 Response regulator receiver domain CIGN_RS04830 PF01339 CheB methylesterase CIGN_RS04835 PF01739 CheR methyltransferase, SAM binding domain CIGN_RS04845 PF04055 Radical SAM superfamily CIGN_RS04895 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIGN_RS04895 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIGN_RS04895 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIGN_RS04900 PF02350 UDP-N-acetylglucosamine 2-epimerase CIGN_RS04905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CIGN_RS04905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CIGN_RS04905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CIGN_RS04935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS04935 PF00672 HAMP domain CIGN_RS04935 PF17200 Single Cache domain 2 CIGN_RS04945 PF00133 tRNA synthetases class I (I, L, M and V) CIGN_RS04945 PF09334 tRNA synthetases class I (M) CIGN_RS04945 PF01588 Putative tRNA binding domain CIGN_RS04955 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CIGN_RS04965 PF01546 Peptidase family M20/M25/M40 CIGN_RS04965 PF07687 Peptidase dimerisation domain CIGN_RS04975 PF01713 Smr domain CIGN_RS04975 PF00488 MutS domain V CIGN_RS04995 PF00528 Binding-protein-dependent transport system inner membrane component CIGN_RS05000 PF12857 TOBE-like domain CIGN_RS05000 PF17850 CysA C-terminal regulatory domain CIGN_RS05000 PF00005 ABC transporter CIGN_RS05005 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS05025 PF00815 Histidinol dehydrogenase CIGN_RS05030 PF03883 Peroxide stress protein YaaA CIGN_RS05040 PF00218 Indole-3-glycerol phosphate synthase CIGN_RS05050 PF03692 Putative zinc- or iron-chelating domain CIGN_RS05055 PF05175 Methyltransferase small domain CIGN_RS05065 PF07992 Pyridine nucleotide-disulphide oxidoreductase CIGN_RS05085 PF00749 tRNA synthetases class I (E and Q), catalytic domain CIGN_RS05090 PF06508 Queuosine biosynthesis protein QueC CIGN_RS05095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CIGN_RS05095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CIGN_RS05095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CIGN_RS05095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CIGN_RS05105 PF05690 Thiazole biosynthesis protein ThiG CIGN_RS05110 PF06968 Biotin and Thiamin Synthesis associated domain CIGN_RS05110 PF04055 Radical SAM superfamily CIGN_RS05115 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS05115 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS05115 PF07196 Flagellin hook IN motif CIGN_RS05120 PF02719 Polysaccharide biosynthesis protein CIGN_RS05125 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS05125 PF07196 Flagellin hook IN motif CIGN_RS05125 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS05130 PF00909 Ammonium Transporter Family CIGN_RS05135 PF12161 HsdM N-terminal domain CIGN_RS05135 PF02384 N-6 DNA Methylase CIGN_RS05145 PF01420 Type I restriction modification DNA specificity domain CIGN_RS05160 PF00474 Sodium:solute symporter family CIGN_RS05165 PF00905 Penicillin binding protein transpeptidase domain CIGN_RS05165 PF03717 Penicillin-binding Protein dimerisation domain CIGN_RS05175 PF01047 MarR family CIGN_RS05175 PF00583 Acetyltransferase (GNAT) family CIGN_RS05180 PF01926 50S ribosome-binding GTPase CIGN_RS05200 PF00475 Imidazoleglycerol-phosphate dehydratase CIGN_RS05205 PF03330 Lytic transglycolase CIGN_RS05205 PF05036 Sporulation related domain CIGN_RS05215 PF01026 TatD related DNase CIGN_RS05220 PF00072 Response regulator receiver domain CIGN_RS05225 PF13476 AAA domain CIGN_RS05230 PF01513 ATP-NAD kinase CIGN_RS05235 PF01336 OB-fold nucleic acid binding domain CIGN_RS05235 PF02938 GAD domain CIGN_RS05235 PF00152 tRNA synthetases class II (D, K and N) CIGN_RS05245 PF00719 Inorganic pyrophosphatase CIGN_RS05250 PF02130 Uncharacterized protein family UPF0054 CIGN_RS05255 PF00593 TonB dependent receptor CIGN_RS05255 PF07715 TonB-dependent Receptor Plug Domain CIGN_RS05260 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CIGN_RS05265 PF00890 FAD binding domain CIGN_RS05265 PF02910 Fumarate reductase flavoprotein C-term CIGN_RS05270 PF13183 4Fe-4S dicluster domain CIGN_RS05270 PF13085 2Fe-2S iron-sulfur cluster binding domain CIGN_RS05290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CIGN_RS05300 PF08245 Mur ligase middle domain CIGN_RS05300 PF02875 Mur ligase family, glutamate ligase domain CIGN_RS05300 PF01225 Mur ligase family, catalytic domain CIGN_RS05310 PF02609 Exonuclease VII small subunit CIGN_RS05315 PF00561 alpha/beta hydrolase fold CIGN_RS05320 PF00478 IMP dehydrogenase / GMP reductase domain CIGN_RS05320 PF00571 CBS domain CIGN_RS05325 PF01425 Amidase CIGN_RS05330 PF00133 tRNA synthetases class I (I, L, M and V) CIGN_RS05330 PF08264 Anticodon-binding domain of tRNA CIGN_RS05335 PF00312 Ribosomal protein S15 CIGN_RS05340 PF02416 mttA/Hcf106 family CIGN_RS05345 PF00902 Sec-independent protein translocase protein (TatC) CIGN_RS05350 PF02547 Queuosine biosynthesis protein CIGN_RS05360 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CIGN_RS05365 PF02769 AIR synthase related protein, C-terminal domain CIGN_RS05365 PF00586 AIR synthase related protein, N-terminal domain CIGN_RS05370 PF01924 Hydrogenase formation hypA family CIGN_RS05375 PF01455 HupF/HypC family CIGN_RS05380 PF02492 CobW/HypB/UreG, nucleotide-binding domain CIGN_RS05385 PF00708 Acylphosphatase CIGN_RS05385 PF07503 HypF finger CIGN_RS05385 PF01300 Telomere recombination CIGN_RS05385 PF17788 HypF Kae1-like domain CIGN_RS05395 PF01750 Hydrogenase maturation protease CIGN_RS05400 PF01292 Prokaryotic cytochrome b561 CIGN_RS05405 PF00374 Nickel-dependent hydrogenase CIGN_RS05410 PF10518 TAT (twin-arginine translocation) pathway signal sequence CIGN_RS05410 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CIGN_RS05410 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CIGN_RS05420 PF00528 Binding-protein-dependent transport system inner membrane component CIGN_RS05425 PF09383 NIL domain CIGN_RS05425 PF00005 ABC transporter CIGN_RS05435 PF10458 Valyl tRNA synthetase tRNA binding arm CIGN_RS05435 PF00133 tRNA synthetases class I (I, L, M and V) CIGN_RS05435 PF08264 Anticodon-binding domain of tRNA CIGN_RS05440 PF10415 Fumarase C C-terminus CIGN_RS05440 PF00206 Lyase CIGN_RS05445 PF08543 Phosphomethylpyrimidine kinase CIGN_RS05445 PF02581 Thiamine monophosphate synthase CIGN_RS05450 PF03180 NLPA lipoprotein CIGN_RS05455 PF00830 Ribosomal L28 family CIGN_RS05465 PF01960 ArgJ family CIGN_RS05475 PF00672 HAMP domain CIGN_RS05475 PF17200 Single Cache domain 2 CIGN_RS05475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS05485 PF02464 Competence-damaged protein CIGN_RS05485 PF00994 Probable molybdopterin binding domain CIGN_RS05490 PF00762 Ferrochelatase CIGN_RS05505 PF00137 ATP synthase subunit C CIGN_RS05520 PF00209 Sodium:neurotransmitter symporter family CIGN_RS05525 PF02436 Conserved carboxylase domain CIGN_RS05525 PF00682 HMGL-like CIGN_RS05525 PF00364 Biotin-requiring enzyme CIGN_RS05530 PF01293 Phosphoenolpyruvate carboxykinase CIGN_RS05535 PF00206 Lyase CIGN_RS05535 PF14698 Argininosuccinate lyase C-terminal CIGN_RS05540 PF10531 SLBB domain CIGN_RS05580 PF01926 50S ribosome-binding GTPase CIGN_RS05580 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CIGN_RS05585 PF01202 Shikimate kinase CIGN_RS05590 PF00579 tRNA synthetases class I (W and Y) CIGN_RS05595 PF02403 Seryl-tRNA synthetase N-terminal domain CIGN_RS05595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIGN_RS05605 PF00171 Aldehyde dehydrogenase family CIGN_RS05615 PF07196 Flagellin hook IN motif CIGN_RS05615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CIGN_RS05635 PF02119 Flagellar P-ring protein CIGN_RS05640 PF13458 Periplasmic binding protein CIGN_RS05655 PF05538 Campylobacter major outer membrane protein CIGN_RS05665 PF13193 AMP-binding enzyme C-terminal domain CIGN_RS05665 PF16177 Acetyl-coenzyme A synthetase N-terminus CIGN_RS05665 PF00501 AMP-binding enzyme CIGN_RS05675 PF00285 Citrate synthase, C-terminal domain CIGN_RS05680 PF03972 MmgE/PrpD family CIGN_RS05685 PF04539 Sigma-70 region 3 CIGN_RS05685 PF04545 Sigma-70, region 4 CIGN_RS05685 PF04542 Sigma-70 region 2 CIGN_RS05685 PF00140 Sigma-70 factor, region 1.2 CIGN_RS05690 PF00501 AMP-binding enzyme CIGN_RS05690 PF16197 Ketoacyl-synthetase C-terminal extension CIGN_RS05690 PF13193 AMP-binding enzyme C-terminal domain CIGN_RS05690 PF00109 Beta-ketoacyl synthase, N-terminal domain CIGN_RS05690 PF00668 Condensation domain CIGN_RS05690 PF02801 Beta-ketoacyl synthase, C-terminal domain CIGN_RS05690 PF08659 KR domain CIGN_RS05690 PF00550 Phosphopantetheine attachment site CIGN_RS05690 PF14765 Polyketide synthase dehydratase CIGN_RS05705 PF01066 CDP-alcohol phosphatidyltransferase CIGN_RS05715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CIGN_RS05715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CIGN_RS05750 PF00118 TCP-1/cpn60 chaperonin family CIGN_RS05755 PF00166 Chaperonin 10 Kd subunit CIGN_RS05770 PF00271 Helicase conserved C-terminal domain CIGN_RS05770 PF04851 Type III restriction enzyme, res subunit CIGN_RS05775 PF05193 Peptidase M16 inactive domain CIGN_RS05780 PF00224 Pyruvate kinase, barrel domain CIGN_RS05780 PF00391 PEP-utilising enzyme, mobile domain CIGN_RS05780 PF02887 Pyruvate kinase, alpha/beta domain CIGN_RS05785 PF06039 Malate:quinone oxidoreductase (Mqo) CIGN_RS05790 PF17763 Glutaminase/Asparaginase C-terminal domain CIGN_RS05790 PF00710 Asparaginase, N-terminal CIGN_RS05795 PF02646 RmuC family CIGN_RS05800 PF08274 PhnA Zinc-Ribbon CIGN_RS05800 PF03831 PhnA domain CIGN_RS05805 PF02272 DHHA1 domain CIGN_RS05805 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CIGN_RS05805 PF01411 tRNA synthetases class II (A) CIGN_RS05815 PF02545 Maf-like protein CIGN_RS05820 PF00912 Transglycosylase CIGN_RS05820 PF00905 Penicillin binding protein transpeptidase domain CIGN_RS05830 PF01245 Ribosomal protein L19 CIGN_RS05835 PF01746 tRNA (Guanine-1)-methyltransferase CIGN_RS05840 PF05239 PRC-barrel domain CIGN_RS05840 PF01782 RimM N-terminal domain CIGN_RS05850 PF00886 Ribosomal protein S16 CIGN_RS05855 PF00448 SRP54-type protein, GTPase domain CIGN_RS05855 PF02881 SRP54-type protein, helical bundle domain CIGN_RS05855 PF02978 Signal peptide binding domain CIGN_RS05860 PF01625 Peptide methionine sulfoxide reductase CIGN_RS05860 PF01641 SelR domain CIGN_RS05865 PF07664 Ferrous iron transport protein B C terminus CIGN_RS05865 PF02421 Ferrous iron transport protein B CIGN_RS05865 PF07670 Nucleoside recognition CIGN_RS05870 PF04023 FeoA domain CIGN_RS05880 PF14492 Elongation Factor G, domain II CIGN_RS05880 PF00679 Elongation factor G C-terminus CIGN_RS05880 PF03764 Elongation factor G, domain IV CIGN_RS05880 PF03144 Elongation factor Tu domain 2 CIGN_RS05880 PF00009 Elongation factor Tu GTP binding domain CIGN_RS05885 PF00177 Ribosomal protein S7p/S5e CIGN_RS05890 PF00164 Ribosomal protein S12/S23 CIGN_RS05900 PF00623 RNA polymerase Rpb1, domain 2 CIGN_RS05900 PF04983 RNA polymerase Rpb1, domain 3 CIGN_RS05900 PF04998 RNA polymerase Rpb1, domain 5 CIGN_RS05900 PF04997 RNA polymerase Rpb1, domain 1 CIGN_RS05900 PF05000 RNA polymerase Rpb1, domain 4 CIGN_RS05905 PF04560 RNA polymerase Rpb2, domain 7 CIGN_RS05905 PF04561 RNA polymerase Rpb2, domain 2 CIGN_RS05905 PF10385 RNA polymerase beta subunit external 1 domain CIGN_RS05905 PF00562 RNA polymerase Rpb2, domain 6 CIGN_RS05905 PF04563 RNA polymerase beta subunit CIGN_RS05905 PF04565 RNA polymerase Rpb2, domain 3 CIGN_RS05910 PF00542 Ribosomal protein L7/L12 C-terminal domain CIGN_RS05910 PF16320 Ribosomal protein L7/L12 dimerisation domain CIGN_RS05915 PF00466 Ribosomal protein L10 CIGN_RS05920 PF00687 Ribosomal protein L1p/L10e family CIGN_RS05925 PF00298 Ribosomal protein L11, RNA binding domain CIGN_RS05925 PF03946 Ribosomal protein L11, N-terminal domain CIGN_RS05930 PF02357 Transcription termination factor nusG CIGN_RS05945 PF00471 Ribosomal protein L33 CIGN_RS05950 PF03143 Elongation factor Tu C-terminal domain CIGN_RS05950 PF03144 Elongation factor Tu domain 2 CIGN_RS05950 PF00009 Elongation factor Tu GTP binding domain CIGN_RS05975 PF16591 Helical bimodular sensor domain CIGN_RS05975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS05975 PF00672 HAMP domain CIGN_RS05980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CIGN_RS05985 PF01709 Transcriptional regulator CIGN_RS05995 PF00403 Heavy-metal-associated domain CIGN_RS06000 PF11798 IMS family HHH motif CIGN_RS06000 PF11799 impB/mucB/samB family C-terminal domain CIGN_RS06000 PF00817 impB/mucB/samB family CIGN_RS06010 PF01790 Prolipoprotein diacylglyceryl transferase CIGN_RS06035 PF17764 3′ DNA-binding domain (3′BD) CIGN_RS06035 PF00270 DEAD/DEAH box helicase CIGN_RS06035 PF18074 Primosomal protein N C-terminal domain CIGN_RS06035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CIGN_RS06035 PF00271 Helicase conserved C-terminal domain CIGN_RS06040 PF07963 Prokaryotic N-terminal methylation motif CIGN_RS06055 PF17757 UvrB interaction domain CIGN_RS06055 PF02151 UvrB/uvrC motif CIGN_RS06055 PF04851 Type III restriction enzyme, res subunit CIGN_RS06055 PF00271 Helicase conserved C-terminal domain CIGN_RS06055 PF12344 Ultra-violet resistance protein B CIGN_RS06060 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS06060 PF07196 Flagellin hook IN motif CIGN_RS06060 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS06075 PF09383 NIL domain CIGN_RS06075 PF00005 ABC transporter CIGN_RS06080 PF02405 Permease MlaE CIGN_RS06085 PF05496 Holliday junction DNA helicase RuvB P-loop domain CIGN_RS06085 PF05491 RuvB C-terminal winged helix domain CIGN_RS06085 PF17864 RuvB AAA lid domain CIGN_RS06095 PF02548 Ketopantoate hydroxymethyltransferase CIGN_RS06120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CIGN_RS06125 PF01029 NusB family CIGN_RS06130 PF00885 6,7-dimethyl-8-ribityllumazine synthase CIGN_RS06145 PF00793 DAHP synthetase I family CIGN_RS06160 PF02397 Bacterial sugar transferase CIGN_RS06165 PF13477 Glycosyl transferase 4-like CIGN_RS06165 PF00534 Glycosyl transferases group 1 CIGN_RS06170 PF18527 STT3/PglB C-terminal beta-barrel domain CIGN_RS06170 PF02516 Oligosaccharyl transferase STT3 subunit CIGN_RS06175 PF00534 Glycosyl transferases group 1 CIGN_RS06175 PF13439 Glycosyltransferase Family 4 CIGN_RS06185 PF13439 Glycosyltransferase Family 4 CIGN_RS06185 PF00534 Glycosyl transferases group 1 CIGN_RS06190 PF01943 Polysaccharide biosynthesis protein CIGN_RS06190 PF14667 Polysaccharide biosynthesis C-terminal domain CIGN_RS06195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CIGN_RS06195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CIGN_RS06205 PF01842 ACT domain CIGN_RS06205 PF01817 Chorismate mutase type II CIGN_RS06205 PF00800 Prephenate dehydratase CIGN_RS06210 PF00155 Aminotransferase class I and II CIGN_RS06215 PF08345 Flagellar M-ring protein C-terminal CIGN_RS06215 PF01514 Secretory protein of YscJ/FliF family CIGN_RS06220 PF01706 FliG C-terminal domain CIGN_RS06220 PF14841 FliG middle domain CIGN_RS06220 PF14842 FliG N-terminal domain CIGN_RS06230 PF02780 Transketolase, C-terminal domain CIGN_RS06230 PF02779 Transketolase, pyrimidine binding domain CIGN_RS06230 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CIGN_RS06235 PF01475 Ferric uptake regulator family CIGN_RS06245 PF01209 ubiE/COQ5 methyltransferase family CIGN_RS06250 PF13742 OB-fold nucleic acid binding domain CIGN_RS06250 PF02601 Exonuclease VII, large subunit CIGN_RS06255 PF00266 Aminotransferase class-V CIGN_RS06260 PF00578 AhpC/TSA family CIGN_RS06260 PF10417 C-terminal domain of 1-Cys peroxiredoxin CIGN_RS06265 PF01039 Carboxyl transferase domain CIGN_RS06265 PF17848 Acetyl-coA carboxylase zinc finger domain CIGN_RS06270 PF02590 Predicted SPOUT methyltransferase CIGN_RS06275 PF01258 Prokaryotic dksA/traR C4-type zinc finger CIGN_RS06285 PF01207 Dihydrouridine synthase (Dus) CIGN_RS06300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS06300 PF02743 Cache domain CIGN_RS06300 PF00672 HAMP domain CIGN_RS06305 PF02811 PHP domain CIGN_RS06305 PF14579 Helix-hairpin-helix motif CIGN_RS06305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CIGN_RS06305 PF07733 Bacterial DNA polymerase III alpha NTPase domain CIGN_RS06310 PF02086 D12 class N6 adenine-specific DNA methyltransferase CIGN_RS06325 PF03958 Bacterial type II/III secretion system short domain CIGN_RS06325 PF00263 Bacterial type II and III secretion system protein CIGN_RS06355 PF08502 LeuA allosteric (dimerisation) domain CIGN_RS06355 PF00682 HMGL-like CIGN_RS06360 PF01066 CDP-alcohol phosphatidyltransferase CIGN_RS06365 PF02666 Phosphatidylserine decarboxylase CIGN_RS06370 PF01434 Peptidase family M41 CIGN_RS06370 PF17862 AAA+ lid domain CIGN_RS06370 PF00004 ATPase family associated with various cellular activities (AAA) CIGN_RS06380 PF00072 Response regulator receiver domain CIGN_RS06385 PF00977 Histidine biosynthesis protein CIGN_RS06390 PF00117 Glutamine amidotransferase class-I CIGN_RS06400 PF02719 Polysaccharide biosynthesis protein CIGN_RS06405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CIGN_RS06415 PF02384 N-6 DNA Methylase CIGN_RS06425 PF08245 Mur ligase middle domain CIGN_RS06430 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CIGN_RS06430 PF00953 Glycosyl transferase family 4 CIGN_RS06435 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CIGN_RS06435 PF01676 Metalloenzyme superfamily CIGN_RS06445 PF00550 Phosphopantetheine attachment site CIGN_RS06450 PF02801 Beta-ketoacyl synthase, C-terminal domain CIGN_RS06450 PF00109 Beta-ketoacyl synthase, N-terminal domain CIGN_RS06455 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CIGN_RS06475 PF00472 RF-1 domain CIGN_RS06475 PF03462 PCRF domain CIGN_RS06480 PF02569 Pantoate-beta-alanine ligase CIGN_RS06485 PF04055 Radical SAM superfamily CIGN_RS06485 PF00919 Uncharacterized protein family UPF0004 CIGN_RS06485 PF18693 TRAM domain CIGN_RS06490 PF01171 PP-loop family CIGN_RS06510 PF04028 Domain of unknown function (DUF374) CIGN_RS06515 PF01938 TRAM domain CIGN_RS06515 PF04055 Radical SAM superfamily CIGN_RS06515 PF00919 Uncharacterized protein family UPF0004 CIGN_RS06525 PF08529 NusA N-terminal domain CIGN_RS06525 PF13184 NusA-like KH domain CIGN_RS06530 PF00005 ABC transporter CIGN_RS06530 PF17755 UvrA DNA-binding domain CIGN_RS06530 PF17760 UvrA interaction domain CIGN_RS06535 PF08402 TOBE domain CIGN_RS06535 PF00005 ABC transporter CIGN_RS06540 PF00528 Binding-protein-dependent transport system inner membrane component CIGN_RS06545 PF13416 Bacterial extracellular solute-binding protein CIGN_RS06555 PF00939 Sodium:sulfate symporter transmembrane region CIGN_RS06565 PF18793 Nitrous oxide reductase propeller repeat 2 CIGN_RS06565 PF18764 Nitrous oxide reductase propeller repeat CIGN_RS06565 PF13473 Cupredoxin-like domain CIGN_RS06580 PF12838 4Fe-4S dicluster domain CIGN_RS06595 PF12801 4Fe-4S binding domain CIGN_RS06595 PF13237 4Fe-4S dicluster domain CIGN_RS06600 PF00005 ABC transporter CIGN_RS06620 PF01171 PP-loop family CIGN_RS06625 PF01048 Phosphorylase superfamily CIGN_RS06630 PF00698 Acyl transferase domain CIGN_RS06635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CIGN_RS06650 PF04052 TolB amino-terminal domain CIGN_RS06660 PF02472 Biopolymer transport protein ExbD/TolR CIGN_RS06665 PF01618 MotA/TolQ/ExbB proton channel family CIGN_RS06670 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CIGN_RS06675 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIGN_RS06675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIGN_RS06680 PF00231 ATP synthase CIGN_RS06685 PF00306 ATP synthase alpha/beta chain, C terminal domain CIGN_RS06685 PF02874 ATP synthase alpha/beta family, beta-barrel domain CIGN_RS06685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIGN_RS06690 PF00213 ATP synthase delta (OSCP) subunit CIGN_RS06695 PF00430 ATP synthase B/B' CF(0) CIGN_RS06705 PF17762 HTH domain found in ParB protein CIGN_RS06705 PF02195 ParB-like nuclease domain CIGN_RS06710 PF13614 AAA domain CIGN_RS06715 PF08279 HTH domain CIGN_RS06715 PF03099 Biotin/lipoate A/B protein ligase family CIGN_RS06715 PF02237 Biotin protein ligase C terminal domain CIGN_RS06720 PF02911 Formyl transferase, C-terminal domain CIGN_RS06720 PF00551 Formyl transferase CIGN_RS06725 PF00696 Amino acid kinase family CIGN_RS06730 PF01018 GTP1/OBG CIGN_RS06730 PF01926 50S ribosome-binding GTPase CIGN_RS06735 PF01016 Ribosomal L27 protein CIGN_RS06740 PF00829 Ribosomal prokaryotic L21 protein CIGN_RS06745 PF00034 Cytochrome c CIGN_RS06745 PF03150 Di-haem cytochrome c peroxidase CIGN_RS06755 PF02348 Cytidylyltransferase CIGN_RS06765 PF01618 MotA/TolQ/ExbB proton channel family CIGN_RS06770 PF02472 Biopolymer transport protein ExbD/TolR CIGN_RS06780 PF03102 NeuB family CIGN_RS06780 PF08666 SAF domain CIGN_RS06785 PF08666 SAF domain CIGN_RS06785 PF03102 NeuB family CIGN_RS06790 PF02350 UDP-N-acetylglucosamine 2-epimerase CIGN_RS06795 PF00483 Nucleotidyl transferase CIGN_RS06805 PF02348 Cytidylyltransferase CIGN_RS06815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CIGN_RS06815 PF13426 PAS domain CIGN_RS06815 PF08447 PAS fold CIGN_RS06820 PF00975 Thioesterase domain CIGN_RS06820 PF00550 Phosphopantetheine attachment site CIGN_RS06820 PF00668 Condensation domain CIGN_RS06820 PF13193 AMP-binding enzyme C-terminal domain CIGN_RS06820 PF00501 AMP-binding enzyme CIGN_RS06840 PF01979 Amidohydrolase family CIGN_RS06845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CIGN_RS06845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CIGN_RS06850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CIGN_RS06850 PF07498 Rho termination factor, N-terminal domain CIGN_RS06850 PF07497 Rho termination factor, RNA-binding domain CIGN_RS06855 PF12170 DNA polymerase III tau subunit V interacting with alpha CIGN_RS06855 PF12169 DNA polymerase III subunits gamma and tau domain III CIGN_RS06855 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CIGN_RS06860 PF00679 Elongation factor G C-terminus CIGN_RS06860 PF06421 GTP-binding protein LepA C-terminus CIGN_RS06860 PF00009 Elongation factor Tu GTP binding domain CIGN_RS06860 PF03144 Elongation factor Tu domain 2 CIGN_RS06870 PF01361 Tautomerase enzyme CIGN_RS06880 PF00156 Phosphoribosyl transferase domain CIGN_RS06885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CIGN_RS06890 PF00692 dUTPase CIGN_RS06895 PF00939 Sodium:sulfate symporter transmembrane region CIGN_RS06920 PF00364 Biotin-requiring enzyme CIGN_RS06925 PF00289 Biotin carboxylase, N-terminal domain CIGN_RS06925 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIGN_RS06925 PF02785 Biotin carboxylase C-terminal domain CIGN_RS06940 PF00202 Aminotransferase class-III CIGN_RS06950 PF04301 Protein of unknown function (DUF452) CIGN_RS06950 PF08241 Methyltransferase domain CIGN_RS06955 PF00155 Aminotransferase class I and II CIGN_RS06960 PF00005 ABC transporter CIGN_RS06965 PF00889 Elongation factor TS CIGN_RS06970 PF00318 Ribosomal protein S2 CIGN_RS06980 PF02578 Multi-copper polyphenol oxidoreductase laccase CIGN_RS06985 PF00677 Lumazine binding domain CIGN_RS06990 PF13932 GidA associated domain CIGN_RS06990 PF01134 Glucose inhibited division protein A CIGN_RS06995 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CIGN_RS06995 PF00355 Rieske [2Fe-2S] domain CIGN_RS07000 PF00033 Cytochrome b/b6/petB CIGN_RS07000 PF00032 Cytochrome b(C-terminal)/b6/petD CIGN_RS07030 PF03989 DNA gyrase C-terminal domain, beta-propeller CIGN_RS07030 PF00521 DNA gyrase/topoisomerase IV, subunit A CIGN_RS07045 PF00072 Response regulator receiver domain CIGN_RS07045 PF00158 Sigma-54 interaction domain CIGN_RS07050 PF02774 Semialdehyde dehydrogenase, dimerisation domain CIGN_RS07050 PF01118 Semialdehyde dehydrogenase, NAD binding domain CIGN_RS07060 PF01208 Uroporphyrinogen decarboxylase (URO-D) CIGN_RS07065 PF04055 Radical SAM superfamily CIGN_RS07080 PF13356 Arm DNA-binding domain CIGN_RS07080 PF00589 Phage integrase family CIGN_RS07105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CIGN_RS07105 PF18698 Histidine kinase sensor domain CIGN_RS07105 PF00989 PAS fold CIGN_RS07105 PF00512 His Kinase A (phospho-acceptor) domain CIGN_RS07105 PF00672 HAMP domain CIGN_RS07110 PF00486 Transcriptional regulatory protein, C terminal CIGN_RS07110 PF00072 Response regulator receiver domain CIGN_RS07115 PF00005 ABC transporter CIGN_RS07120 PF00528 Binding-protein-dependent transport system inner membrane component CIGN_RS07125 PF00528 Binding-protein-dependent transport system inner membrane component CIGN_RS07130 PF12849 PBP superfamily domain CIGN_RS07135 PF07690 Major Facilitator Superfamily CIGN_RS07140 PF03453 MoeA N-terminal region (domain I and II) CIGN_RS07140 PF03454 MoeA C-terminal region (domain IV) CIGN_RS07140 PF00994 Probable molybdopterin binding domain CIGN_RS07190 PF00403 Heavy-metal-associated domain CIGN_RS07195 PF14572 Phosphoribosyl synthetase-associated domain CIGN_RS07195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CIGN_RS07200 PF00482 Type II secretion system (T2SS), protein F CIGN_RS07205 PF00437 Type II/IV secretion system protein CIGN_RS07210 PF00459 Inositol monophosphatase family CIGN_RS07215 PF00285 Citrate synthase, C-terminal domain CIGN_RS07220 PF00999 Sodium/hydrogen exchanger family CIGN_RS07220 PF02080 TrkA-C domain CIGN_RS07220 PF02254 TrkA-N domain CIGN_RS07225 PF04055 Radical SAM superfamily CIGN_RS07225 PF06968 Biotin and Thiamin Synthesis associated domain CIGN_RS07230 PF01751 Toprim domain CIGN_RS07230 PF01131 DNA topoisomerase CIGN_RS07230 PF01396 Topoisomerase DNA binding C4 zinc finger CIGN_RS07235 PF00361 Proton-conducting membrane transporter CIGN_RS07240 PF00361 Proton-conducting membrane transporter CIGN_RS07245 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CIGN_RS07245 PF00361 Proton-conducting membrane transporter CIGN_RS07250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CIGN_RS07255 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CIGN_RS07260 PF12838 4Fe-4S dicluster domain CIGN_RS07265 PF00146 NADH dehydrogenase CIGN_RS07270 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CIGN_RS07270 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CIGN_RS07270 PF00384 Molybdopterin oxidoreductase CIGN_RS07275 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CIGN_RS07275 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CIGN_RS07275 PF10531 SLBB domain CIGN_RS07285 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CIGN_RS07285 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CIGN_RS07290 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CIGN_RS07295 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CIGN_RS07300 PF13722 5TM C-terminal transporter carbon starvation CstA CIGN_RS07300 PF02554 Carbon starvation protein CstA CIGN_RS07305 PF04328 Selenoprotein, putative CIGN_RS07320 PF06480 FtsH Extracellular CIGN_RS07320 PF17862 AAA+ lid domain CIGN_RS07320 PF00004 ATPase family associated with various cellular activities (AAA) CIGN_RS07320 PF01434 Peptidase family M41 CIGN_RS07335 PF01311 Bacterial export proteins, family 1 CIGN_RS07345 PF00625 Guanylate kinase CIGN_RS07350 PF02416 mttA/Hcf106 family CIGN_RS07355 PF00750 tRNA synthetases class I (R) CIGN_RS07355 PF05746 DALR anticodon binding domain CIGN_RS07355 PF03485 Arginyl tRNA synthetase N terminal domain CIGN_RS07360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CIGN_RS07365 PF00692 dUTPase CIGN_RS07370 PF00364 Biotin-requiring enzyme CIGN_RS07375 PF02785 Biotin carboxylase C-terminal domain CIGN_RS07375 PF00289 Biotin carboxylase, N-terminal domain CIGN_RS07375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CIGN_RS07380 PF01930 Domain of unknown function DUF83 CIGN_RS07390 PF01867 CRISPR associated protein Cas1 CIGN_RS07415 PF01467 Cytidylyltransferase-like CIGN_RS07420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CIGN_RS07420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CIGN_RS07425 PF00162 Phosphoglycerate kinase CIGN_RS07430 PF00121 Triosephosphate isomerase CIGN_RS07440 PF00266 Aminotransferase class-V CIGN_RS07445 PF01106 NifU-like domain CIGN_RS07445 PF04324 BFD-like [2Fe-2S] binding domain CIGN_RS07445 PF01592 NifU-like N terminal domain CIGN_RS07460 PF13726 Na+-H+ antiporter family CIGN_RS07460 PF03553 Na+/H+ antiporter family CIGN_RS07465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CIGN_RS07465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CIGN_RS07465 PF03129 Anticodon binding domain CIGN_RS07470 PF00707 Translation initiation factor IF-3, C-terminal domain CIGN_RS07470 PF05198 Translation initiation factor IF-3, N-terminal domain CIGN_RS07475 PF07196 Flagellin hook IN motif CIGN_RS07475 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS07475 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS07480 PF01678 Diaminopimelate epimerase CIGN_RS07485 PF02621 Menaquinone biosynthesis CIGN_RS07490 PF01313 Bacterial export proteins, family 3 CIGN_RS07495 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CIGN_RS07500 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS07500 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS07500 PF07196 Flagellin hook IN motif CIGN_RS07510 PF08645 Polynucleotide kinase 3 phosphatase CIGN_RS07515 PF01370 NAD dependent epimerase/dehydratase family CIGN_RS07520 PF01467 Cytidylyltransferase-like CIGN_RS07520 PF00294 pfkB family carbohydrate kinase CIGN_RS07525 PF13580 SIS domain CIGN_RS07535 PF13439 Glycosyltransferase Family 4 CIGN_RS07535 PF00534 Glycosyl transferases group 1 CIGN_RS07560 PF01068 ATP dependent DNA ligase domain CIGN_RS07560 PF14743 DNA ligase OB-like domain CIGN_RS07570 PF13302 Acetyltransferase (GNAT) domain CIGN_RS07575 PF01370 NAD dependent epimerase/dehydratase family CIGN_RS07580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CIGN_RS07580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CIGN_RS07595 PF12951 Passenger-associated-transport-repeat CIGN_RS07595 PF03797 Autotransporter beta-domain CIGN_RS07595 PF00082 Subtilase family CIGN_RS07615 PF00268 Ribonucleotide reductase, small chain CIGN_RS07625 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS07625 PF07196 Flagellin hook IN motif CIGN_RS07625 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS07630 PF01595 Cyclin M transmembrane N-terminal domain CIGN_RS07630 PF03471 Transporter associated domain CIGN_RS07630 PF00571 CBS domain CIGN_RS07635 PF02321 Outer membrane efflux protein CIGN_RS07640 PF00873 AcrB/AcrD/AcrF family CIGN_RS07645 PF13533 Biotin-lipoyl like CIGN_RS07655 PF01165 Ribosomal protein S21 CIGN_RS07665 PF01967 MoaC family CIGN_RS07670 PF04359 Protein of unknown function (DUF493) CIGN_RS07675 PF02779 Transketolase, pyrimidine binding domain CIGN_RS07675 PF02780 Transketolase, C-terminal domain CIGN_RS07675 PF00456 Transketolase, thiamine diphosphate binding domain CIGN_RS07680 PF00348 Polyprenyl synthetase CIGN_RS07685 PF00595 PDZ domain CIGN_RS07690 PF02575 YbaB/EbfC DNA-binding family CIGN_RS07695 PF02261 Aspartate decarboxylase CIGN_RS07700 PF02875 Mur ligase family, glutamate ligase domain CIGN_RS07700 PF08245 Mur ligase middle domain CIGN_RS07730 PF01196 Ribosomal protein L17 CIGN_RS07735 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CIGN_RS07735 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CIGN_RS07735 PF01000 RNA polymerase Rpb3/RpoA insert domain CIGN_RS07740 PF00163 Ribosomal protein S4/S9 N-terminal domain CIGN_RS07740 PF01479 S4 domain CIGN_RS07745 PF00411 Ribosomal protein S11 CIGN_RS07750 PF00416 Ribosomal protein S13/S18 CIGN_RS07755 PF00444 Ribosomal protein L36 CIGN_RS07760 PF03063 Prismane/CO dehydrogenase family CIGN_RS07770 PF01176 Translation initiation factor 1A / IF-1 CIGN_RS07775 PF00557 Metallopeptidase family M24 CIGN_RS07780 PF00344 SecY translocase CIGN_RS07785 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CIGN_RS07790 PF00333 Ribosomal protein S5, N-terminal domain CIGN_RS07790 PF03719 Ribosomal protein S5, C-terminal domain CIGN_RS07795 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CIGN_RS07800 PF00347 Ribosomal protein L6 CIGN_RS07805 PF00410 Ribosomal protein S8 CIGN_RS07810 PF00253 Ribosomal protein S14p/S29e CIGN_RS07815 PF00673 ribosomal L5P family C-terminus CIGN_RS07815 PF00281 Ribosomal protein L5 CIGN_RS07820 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CIGN_RS07820 PF00467 KOW motif CIGN_RS07825 PF00238 Ribosomal protein L14p/L23e CIGN_RS07830 PF00366 Ribosomal protein S17 CIGN_RS07835 PF00831 Ribosomal L29 protein CIGN_RS07840 PF00252 Ribosomal protein L16p/L10e CIGN_RS07845 PF00189 Ribosomal protein S3, C-terminal domain CIGN_RS07845 PF07650 KH domain CIGN_RS07850 PF00237 Ribosomal protein L22p/L17e CIGN_RS07855 PF00203 Ribosomal protein S19 CIGN_RS07860 PF00181 Ribosomal Proteins L2, RNA binding domain CIGN_RS07860 PF03947 Ribosomal Proteins L2, C-terminal domain CIGN_RS07865 PF00276 Ribosomal protein L23 CIGN_RS07870 PF00573 Ribosomal protein L4/L1 family CIGN_RS07875 PF00297 Ribosomal protein L3 CIGN_RS07880 PF00338 Ribosomal protein S10p/S20e CIGN_RS07895 PF18364 Molybdopterin oxidoreductase N-terminal domain CIGN_RS07895 PF00384 Molybdopterin oxidoreductase CIGN_RS07895 PF01568 Molydopterin dinucleotide binding domain CIGN_RS07905 PF07196 Flagellin hook IN motif CIGN_RS07905 PF00669 Bacterial flagellin N-terminal helical region CIGN_RS07905 PF00700 Bacterial flagellin C-terminal helical region CIGN_RS07910 PF04608 Phosphatidylglycerophosphatase A CIGN_RS07915 PF01747 ATP-sulfurylase CIGN_RS07915 PF14306 PUA-like domain CIGN_RS07920 PF00486 Transcriptional regulatory protein, C terminal CIGN_RS07920 PF00072 Response regulator receiver domain CIGN_RS07925 PF02542 YgbB family CIGN_RS07925 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CIGN_RS07930 PF01964 Radical SAM ThiC family CIGN_RS07935 PF03601 Conserved hypothetical protein 698 CIGN_RS07940 PF00591 Glycosyl transferase family, a/b domain CIGN_RS07940 PF00117 Glutamine amidotransferase class-I CIGN_RS07940 PF02885 Glycosyl transferase family, helical bundle domain CIGN_RS07945 PF04715 Anthranilate synthase component I, N terminal region CIGN_RS07945 PF00425 chorismate binding enzyme CIGN_RS07950 PF10609 NUBPL iron-transfer P-loop NTPase CIGN_RS07950 PF01883 Iron-sulfur cluster assembly protein CIGN_RS07955 PF01152 Bacterial-like globin CIGN_RS07965 PF01451 Low molecular weight phosphotyrosine protein phosphatase CIGN_RS08005 PF02146 Sir2 family CIGN_RS08035 PF00849 RNA pseudouridylate synthase CIGN_RS08035 PF01479 S4 domain CIGN_RS08040 PF00571 CBS domain CIGN_RS08040 PF01380 SIS domain CIGN_RS08045 PF00753 Metallo-beta-lactamase superfamily CIGN_RS08045 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CIGN_RS08045 PF17770 Ribonuclease J C-terminal domain CIGN_RS08050 PF00398 Ribosomal RNA adenine dimethylase CIGN_RS08055 PF00977 Histidine biosynthesis protein CIGN_RS08065 PF04055 Radical SAM superfamily CIGN_RS08070 PF00849 RNA pseudouridylate synthase CIGN_RS08075 PF10397 Adenylosuccinate lyase C-terminus CIGN_RS08075 PF00206 Lyase CIGN_RS08080 PF03477 ATP cone domain CIGN_RS08080 PF02867 Ribonucleotide reductase, barrel domain CIGN_RS08080 PF00317 Ribonucleotide reductase, all-alpha domain CIGN_RS08090 PF02075 Crossover junction endodeoxyribonuclease RuvC