CLAN_RS00020	PWY-6700	queuosine biosynthesis
CLAN_RS00075	PWY-3341	L-proline biosynthesis III
CLAN_RS00075	PWY-4981	L-proline biosynthesis II (from arginine)
CLAN_RS00075	PWY-6344	L-ornithine degradation II (Stickland reaction)
CLAN_RS00095	PWY-4981	L-proline biosynthesis II (from arginine)
CLAN_RS00095	PWY-4984	urea cycle
CLAN_RS00095	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLAN_RS00100	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLAN_RS00100	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CLAN_RS00105	PWY-6168	flavin biosynthesis III (fungi)
CLAN_RS00105	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CLAN_RS00160	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLAN_RS00160	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLAN_RS00160	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLAN_RS00175	PWY-7851	CLAN_RS00175
CLAN_RS00195	PWY-6823	molybdenum cofactor biosynthesis
CLAN_RS00195	PWY-6891	thiazole biosynthesis II (Bacillus)
CLAN_RS00195	PWY-6892	thiazole biosynthesis I (E. coli)
CLAN_RS00195	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CLAN_RS00240	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLAN_RS00370	PWY-6823	molybdenum cofactor biosynthesis
CLAN_RS00415	PWY-1042	glycolysis IV (plant cytosol)
CLAN_RS00415	PWY-1622	formaldehyde assimilation I (serine pathway)
CLAN_RS00415	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLAN_RS00415	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLAN_RS00415	PWY-5723	Rubisco shunt
CLAN_RS00415	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLAN_RS00415	PWY-6886	1-butanol autotrophic biosynthesis
CLAN_RS00415	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS00415	PWY-7003	glycerol degradation to butanol
CLAN_RS00415	PWY-7124	ethylene biosynthesis V (engineered)
CLAN_RS00415	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLAN_RS00475	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS00480	PWY-5663	tetrahydrobiopterin biosynthesis I
CLAN_RS00480	PWY-5664	tetrahydrobiopterin biosynthesis II
CLAN_RS00480	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CLAN_RS00480	PWY-6703	preQ<sub>0</sub> biosynthesis
CLAN_RS00480	PWY-6983	tetrahydrobiopterin biosynthesis III
CLAN_RS00480	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CLAN_RS00480	PWY-7852	CLAN_RS00480
CLAN_RS00510	PWY-6938	NADH repair
CLAN_RS00515	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLAN_RS00515	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CLAN_RS00575	PWY-6854	ethylene biosynthesis III (microbes)
CLAN_RS00630	PWY-7560	methylerythritol phosphate pathway II
CLAN_RS00680	PWY-5686	UMP biosynthesis
CLAN_RS00680	PWY-7790	CLAN_RS00680
CLAN_RS00680	PWY-7791	CLAN_RS00680
CLAN_RS00785	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CLAN_RS00790	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CLAN_RS00810	PWY-5481	pyruvate fermentation to lactate
CLAN_RS00810	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
CLAN_RS00810	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS00820	PWY-5481	pyruvate fermentation to lactate
CLAN_RS00820	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
CLAN_RS00820	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS00825	PWY-5481	pyruvate fermentation to lactate
CLAN_RS00825	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
CLAN_RS00825	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS00920	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CLAN_RS00970	PWY-3821	galactose degradation III
CLAN_RS00970	PWY-6317	galactose degradation I (Leloir pathway)
CLAN_RS00970	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CLAN_RS00970	PWY-6527	stachyose degradation
CLAN_RS00970	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CLAN_RS00970	PWY-7344	UDP-D-galactose biosynthesis
CLAN_RS00975	PWY-5057	L-valine degradation II
CLAN_RS00975	PWY-5076	L-leucine degradation III
CLAN_RS00975	PWY-5078	L-isoleucine degradation II
CLAN_RS00975	PWY-5101	L-isoleucine biosynthesis II
CLAN_RS00975	PWY-5103	L-isoleucine biosynthesis III
CLAN_RS00975	PWY-5104	L-isoleucine biosynthesis IV
CLAN_RS00975	PWY-5108	L-isoleucine biosynthesis V
CLAN_RS00975	PWY-7767	CLAN_RS00975
CLAN_RS01020	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CLAN_RS01020	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CLAN_RS01020	PWY-5989	stearate biosynthesis II (bacteria and plants)
CLAN_RS01020	PWY-5994	palmitate biosynthesis I (animals and fungi)
CLAN_RS01020	PWY-6113	superpathway of mycolate biosynthesis
CLAN_RS01020	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CLAN_RS01020	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CLAN_RS01020	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLAN_RS01020	PWY-7663	gondoate biosynthesis (anaerobic)
CLAN_RS01020	PWY-7664	oleate biosynthesis IV (anaerobic)
CLAN_RS01020	PWY-7858	CLAN_RS01020
CLAN_RS01020	PWYG-321	mycolate biosynthesis
CLAN_RS01045	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLAN_RS01045	PWY-5686	UMP biosynthesis
CLAN_RS01045	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLAN_RS01045	PWY-7790	CLAN_RS01045
CLAN_RS01045	PWY-7791	CLAN_RS01045
CLAN_RS01100	PWY-5381	pyridine nucleotide cycling (plants)
CLAN_RS01100	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLAN_RS01100	PWY-6596	adenosine nucleotides degradation I
CLAN_RS01100	PWY-6606	guanosine nucleotides degradation II
CLAN_RS01100	PWY-6607	guanosine nucleotides degradation I
CLAN_RS01100	PWY-6608	guanosine nucleotides degradation III
CLAN_RS01100	PWY-7185	UTP and CTP dephosphorylation I
CLAN_RS01100	PWY-7821	CLAN_RS01100
CLAN_RS01105	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CLAN_RS01105	PWY-622	starch biosynthesis
CLAN_RS01115	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLAN_RS01115	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLAN_RS01145	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLAN_RS01145	PWY-5723	Rubisco shunt
CLAN_RS01155	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CLAN_RS01160	PWY-6562	norspermidine biosynthesis
CLAN_RS01175	PWY-5686	UMP biosynthesis
CLAN_RS01175	PWY-7790	CLAN_RS01175
CLAN_RS01175	PWY-7791	CLAN_RS01175
CLAN_RS01180	PWY-5686	UMP biosynthesis
CLAN_RS01180	PWY-7790	CLAN_RS01180
CLAN_RS01180	PWY-7791	CLAN_RS01180
CLAN_RS01195	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CLAN_RS01195	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CLAN_RS01195	PWY-5989	stearate biosynthesis II (bacteria and plants)
CLAN_RS01195	PWY-6113	superpathway of mycolate biosynthesis
CLAN_RS01195	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CLAN_RS01195	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CLAN_RS01195	PWY-7663	gondoate biosynthesis (anaerobic)
CLAN_RS01195	PWY-7664	oleate biosynthesis IV (anaerobic)
CLAN_RS01195	PWY-7858	CLAN_RS01195
CLAN_RS01195	PWYG-321	mycolate biosynthesis
CLAN_RS01200	PWY-1042	glycolysis IV (plant cytosol)
CLAN_RS01200	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLAN_RS01200	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLAN_RS01200	PWY-7003	glycerol degradation to butanol
CLAN_RS01205	PWY-1042	glycolysis IV (plant cytosol)
CLAN_RS01205	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLAN_RS01205	PWY-6886	1-butanol autotrophic biosynthesis
CLAN_RS01205	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS01205	PWY-7003	glycerol degradation to butanol
CLAN_RS01210	PWY-1042	glycolysis IV (plant cytosol)
CLAN_RS01210	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLAN_RS01210	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS01210	PWY-7003	glycerol degradation to butanol
CLAN_RS01215	PWY-5381	pyridine nucleotide cycling (plants)
CLAN_RS01215	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CLAN_RS01215	PWY-7761	CLAN_RS01215
CLAN_RS01235	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS01285	PWY-2201	folate transformations I
CLAN_RS01405	PWY-6167	flavin biosynthesis II (archaea)
CLAN_RS01405	PWY-6168	flavin biosynthesis III (fungi)
CLAN_RS01405	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS01415	PWY-3781	aerobic respiration I (cytochrome c)
CLAN_RS01415	PWY-6692	Fe(II) oxidation
CLAN_RS01415	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
CLAN_RS01415	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CLAN_RS01465	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLAN_RS01545	PWY-7039	phosphatidate metabolism, as a signaling molecule
CLAN_RS01545	PWY-7817	CLAN_RS01545
CLAN_RS01570	PWY-5674	nitrate reduction IV (dissimilatory)
CLAN_RS01590	PWY-6749	CMP-legionaminate biosynthesis I
CLAN_RS01605	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLAN_RS01605	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLAN_RS01610	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CLAN_RS01610	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CLAN_RS01610	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CLAN_RS01610	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CLAN_RS01610	PWY-6978	plastoquinol-9 biosynthesis II
CLAN_RS01680	PWY-6825	phosphatidylcholine biosynthesis V
CLAN_RS01685	PWY-6679	jadomycin biosynthesis
CLAN_RS01685	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLAN_RS01710	PWY-5839	menaquinol-7 biosynthesis
CLAN_RS01710	PWY-5844	menaquinol-9 biosynthesis
CLAN_RS01710	PWY-5849	menaquinol-6 biosynthesis
CLAN_RS01710	PWY-5890	menaquinol-10 biosynthesis
CLAN_RS01710	PWY-5891	menaquinol-11 biosynthesis
CLAN_RS01710	PWY-5892	menaquinol-12 biosynthesis
CLAN_RS01710	PWY-5895	menaquinol-13 biosynthesis
CLAN_RS01725	PWY-6891	thiazole biosynthesis II (Bacillus)
CLAN_RS01725	PWY-6892	thiazole biosynthesis I (E. coli)
CLAN_RS01725	PWY-7560	methylerythritol phosphate pathway II
CLAN_RS01750	PWY-3461	L-tyrosine biosynthesis II
CLAN_RS01750	PWY-3462	L-phenylalanine biosynthesis II
CLAN_RS01750	PWY-6120	L-tyrosine biosynthesis III
CLAN_RS01750	PWY-6627	salinosporamide A biosynthesis
CLAN_RS01750	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CLAN_RS01750	PWY-7626	bacilysin biosynthesis
CLAN_RS01760	PWY-2941	L-lysine biosynthesis II
CLAN_RS01760	PWY-2942	L-lysine biosynthesis III
CLAN_RS01760	PWY-5097	L-lysine biosynthesis VI
CLAN_RS01830	PWY-2941	L-lysine biosynthesis II
CLAN_RS01830	PWY-2942	L-lysine biosynthesis III
CLAN_RS01830	PWY-5097	L-lysine biosynthesis VI
CLAN_RS01830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLAN_RS01830	PWY-6559	spermidine biosynthesis II
CLAN_RS01830	PWY-6562	norspermidine biosynthesis
CLAN_RS01830	PWY-7153	grixazone biosynthesis
CLAN_RS01830	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLAN_RS01840	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CLAN_RS01840	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CLAN_RS01840	PWY-7766	CLAN_RS01840
CLAN_RS01890	PWY-5482	pyruvate fermentation to acetate II
CLAN_RS01890	PWY-5485	pyruvate fermentation to acetate IV
CLAN_RS01890	PWY-5497	purine nucleobases degradation II (anaerobic)
CLAN_RS01895	PWY-1281	sulfoacetaldehyde degradation I
CLAN_RS01895	PWY-5482	pyruvate fermentation to acetate II
CLAN_RS01895	PWY-5485	pyruvate fermentation to acetate IV
CLAN_RS01895	PWY-5497	purine nucleobases degradation II (anaerobic)
CLAN_RS01895	PWY-6637	sulfolactate degradation II
CLAN_RS02010	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLAN_RS02010	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLAN_RS02010	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLAN_RS02015	PWY-6123	inosine-5'-phosphate biosynthesis I
CLAN_RS02015	PWY-6124	inosine-5'-phosphate biosynthesis II
CLAN_RS02015	PWY-7234	inosine-5'-phosphate biosynthesis III
CLAN_RS02050	PWY-6829	tRNA methylation (yeast)
CLAN_RS02050	PWY-7285	methylwyosine biosynthesis
CLAN_RS02050	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CLAN_RS02110	PWY-7254	TCA cycle VII (acetate-producers)
CLAN_RS02115	PWY-1042	glycolysis IV (plant cytosol)
CLAN_RS02115	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLAN_RS02115	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLAN_RS02115	PWY-5723	Rubisco shunt
CLAN_RS02115	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLAN_RS02115	PWY-6886	1-butanol autotrophic biosynthesis
CLAN_RS02115	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS02115	PWY-7003	glycerol degradation to butanol
CLAN_RS02115	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLAN_RS02115	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLAN_RS02170	PWY-4381	fatty acid biosynthesis initiation I
CLAN_RS02215	PWY-5747	2-methylcitrate cycle II
CLAN_RS02220	PWY-5132	humulone biosynthesis
CLAN_RS02220	PWY-5133	cohumulone biosynthesis
CLAN_RS02220	PWY-6672	<i>cis</i>-genanyl-CoA degradation
CLAN_RS02220	PWY-7118	chitin degradation to ethanol
CLAN_RS02220	PWY-7857	CLAN_RS02220
CLAN_RS02320	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLAN_RS02375	PWY-3341	L-proline biosynthesis III
CLAN_RS02375	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CLAN_RS02385	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CLAN_RS02395	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLAN_RS02420	PWY-6654	phosphopantothenate biosynthesis III
CLAN_RS02720	PWY-2201	folate transformations I
CLAN_RS02850	PWY-2161	folate polyglutamylation
CLAN_RS02910	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS02915	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLAN_RS02915	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CLAN_RS02920	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CLAN_RS02925	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CLAN_RS02925	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CLAN_RS02925	PWY-6897	thiamin salvage II
CLAN_RS02925	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CLAN_RS02925	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CLAN_RS02925	PWY-7356	thiamin salvage IV (yeast)
CLAN_RS02925	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLAN_RS02970	PWY-43	putrescine biosynthesis II
CLAN_RS03050	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLAN_RS03050	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLAN_RS03050	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLAN_RS03095	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLAN_RS03100	PWY-7560	methylerythritol phosphate pathway II
CLAN_RS03185	PWY-723	alkylnitronates degradation
CLAN_RS03230	PWY-3801	sucrose degradation II (sucrose synthase)
CLAN_RS03230	PWY-6527	stachyose degradation
CLAN_RS03230	PWY-7238	sucrose biosynthesis II
CLAN_RS03230	PWY-7343	UDP-glucose biosynthesis
CLAN_RS03230	PWY-7817	CLAN_RS03230
CLAN_RS03235	PWY-3801	sucrose degradation II (sucrose synthase)
CLAN_RS03235	PWY-5054	sorbitol biosynthesis I
CLAN_RS03235	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CLAN_RS03235	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CLAN_RS03235	PWY-5659	GDP-mannose biosynthesis
CLAN_RS03235	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLAN_RS03235	PWY-621	sucrose degradation III (sucrose invertase)
CLAN_RS03235	PWY-622	starch biosynthesis
CLAN_RS03235	PWY-6981	chitin biosynthesis
CLAN_RS03235	PWY-6992	1,5-anhydrofructose degradation
CLAN_RS03235	PWY-7238	sucrose biosynthesis II
CLAN_RS03235	PWY-7347	sucrose biosynthesis III
CLAN_RS03235	PWY-7385	1,3-propanediol biosynthesis (engineered)
CLAN_RS03320	PWY-5198	factor 420 biosynthesis
CLAN_RS03320	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CLAN_RS03320	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CLAN_RS03350	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLAN_RS03350	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLAN_RS03395	PWY-5198	factor 420 biosynthesis
CLAN_RS03395	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CLAN_RS03395	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CLAN_RS03420	PWY-7801	CLAN_RS03420
CLAN_RS03450	PWY-6936	seleno-amino acid biosynthesis
CLAN_RS03450	PWY-7274	D-cycloserine biosynthesis
CLAN_RS03455	PWY-40	putrescine biosynthesis I
CLAN_RS03455	PWY-43	putrescine biosynthesis II
CLAN_RS03455	PWY-6305	putrescine biosynthesis IV
CLAN_RS03455	PWY-6834	spermidine biosynthesis III
CLAN_RS03465	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLAN_RS03465	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLAN_RS03465	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLAN_RS03465	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CLAN_RS03465	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLAN_RS03465	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLAN_RS03470	PWY-7851	CLAN_RS03470
CLAN_RS03485	PWY-6823	molybdenum cofactor biosynthesis
CLAN_RS03490	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLAN_RS03490	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLAN_RS03495	PWY-6164	3-dehydroquinate biosynthesis I
CLAN_RS03505	PWY-5669	phosphatidylethanolamine biosynthesis I
CLAN_RS03520	PWY-3961	phosphopantothenate biosynthesis II
CLAN_RS03565	PWY-1622	formaldehyde assimilation I (serine pathway)
CLAN_RS03565	PWY-181	photorespiration
CLAN_RS03565	PWY-2161	folate polyglutamylation
CLAN_RS03565	PWY-2201	folate transformations I
CLAN_RS03565	PWY-3661	glycine betaine degradation I
CLAN_RS03565	PWY-3661-1	glycine betaine degradation II (mammalian)
CLAN_RS03565	PWY-3841	folate transformations II
CLAN_RS03565	PWY-5497	purine nucleobases degradation II (anaerobic)
CLAN_RS03580	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLAN_RS03640	PWY-5103	L-isoleucine biosynthesis III
CLAN_RS03640	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLAN_RS03660	PWY-6825	phosphatidylcholine biosynthesis V
CLAN_RS03665	PWY-2201	folate transformations I
CLAN_RS03665	PWY-5497	purine nucleobases degradation II (anaerobic)
CLAN_RS03670	PWY-6004	glycine betaine biosynthesis V (from glycine)
CLAN_RS03775	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLAN_RS03785	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLAN_RS03785	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLAN_RS03895	PWY-6936	seleno-amino acid biosynthesis
CLAN_RS03915	PWY-4983	L-citrulline-nitric oxide cycle
CLAN_RS03915	PWY-4984	urea cycle
CLAN_RS03915	PWY-5	canavanine biosynthesis
CLAN_RS03915	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLAN_RS03915	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLAN_RS03930	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLAN_RS03930	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CLAN_RS03930	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CLAN_RS03930	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLAN_RS03960	PWY-6164	3-dehydroquinate biosynthesis I
CLAN_RS03985	PWY-6700	queuosine biosynthesis
CLAN_RS04050	PWY-2201	folate transformations I
CLAN_RS04050	PWY-3841	folate transformations II
CLAN_RS04055	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CLAN_RS04055	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CLAN_RS04055	PWY-6936	seleno-amino acid biosynthesis
CLAN_RS04055	PWY-702	L-methionine biosynthesis II
CLAN_RS04075	PWY-5101	L-isoleucine biosynthesis II
CLAN_RS04075	PWY-5103	L-isoleucine biosynthesis III
CLAN_RS04075	PWY-5104	L-isoleucine biosynthesis IV
CLAN_RS04075	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CLAN_RS04075	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CLAN_RS04075	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CLAN_RS04075	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLAN_RS04080	PWY-5101	L-isoleucine biosynthesis II
CLAN_RS04080	PWY-5103	L-isoleucine biosynthesis III
CLAN_RS04080	PWY-5104	L-isoleucine biosynthesis IV
CLAN_RS04080	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CLAN_RS04080	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CLAN_RS04080	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CLAN_RS04080	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLAN_RS04105	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CLAN_RS04105	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CLAN_RS04145	PWY-7560	methylerythritol phosphate pathway II
CLAN_RS04170	PWY-6167	flavin biosynthesis II (archaea)
CLAN_RS04170	PWY-6168	flavin biosynthesis III (fungi)
CLAN_RS04170	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CLAN_RS04185	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CLAN_RS04210	PWY-6123	inosine-5'-phosphate biosynthesis I
CLAN_RS04210	PWY-7234	inosine-5'-phosphate biosynthesis III
CLAN_RS04235	PWY-381	nitrate reduction II (assimilatory)
CLAN_RS04235	PWY-5675	nitrate reduction V (assimilatory)
CLAN_RS04235	PWY-6549	L-glutamine biosynthesis III
CLAN_RS04235	PWY-6963	ammonia assimilation cycle I
CLAN_RS04235	PWY-6964	ammonia assimilation cycle II
CLAN_RS04240	PWY-6012	acyl carrier protein metabolism I
CLAN_RS04240	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CLAN_RS04295	PWY-5913	TCA cycle VI (obligate autotrophs)
CLAN_RS04295	PWY-6549	L-glutamine biosynthesis III
CLAN_RS04295	PWY-6728	methylaspartate cycle
CLAN_RS04295	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLAN_RS04295	PWY-7124	ethylene biosynthesis V (engineered)
CLAN_RS04295	PWY-7254	TCA cycle VII (acetate-producers)
CLAN_RS04295	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CLAN_RS04325	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLAN_RS04325	PWY-5723	Rubisco shunt
CLAN_RS04335	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLAN_RS04350	PWY-6123	inosine-5'-phosphate biosynthesis I
CLAN_RS04350	PWY-6124	inosine-5'-phosphate biosynthesis II
CLAN_RS04350	PWY-7234	inosine-5'-phosphate biosynthesis III
CLAN_RS04355	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLAN_RS04355	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLAN_RS04355	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLAN_RS04360	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLAN_RS04360	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLAN_RS04360	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLAN_RS04370	PWY-5667	CDP-diacylglycerol biosynthesis I
CLAN_RS04370	PWY-5981	CDP-diacylglycerol biosynthesis III
CLAN_RS04370	PWY-6453	stigma estolide biosynthesis
CLAN_RS04370	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CLAN_RS04370	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CLAN_RS04370	PWY-7587	oleate biosynthesis III (cyanobacteria)
CLAN_RS04370	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
CLAN_RS04370	PWY-7782	CLAN_RS04370
CLAN_RS04395	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CLAN_RS04395	PWY-6167	flavin biosynthesis II (archaea)
CLAN_RS04395	PWY-6168	flavin biosynthesis III (fungi)
CLAN_RS04395	PWY-7863	CLAN_RS04395
CLAN_RS04410	PWY-6614	tetrahydrofolate biosynthesis
CLAN_RS04425	PWY-2941	L-lysine biosynthesis II
CLAN_RS04425	PWY-2942	L-lysine biosynthesis III
CLAN_RS04425	PWY-5097	L-lysine biosynthesis VI
CLAN_RS04425	PWY-6559	spermidine biosynthesis II
CLAN_RS04425	PWY-6562	norspermidine biosynthesis
CLAN_RS04425	PWY-7153	grixazone biosynthesis
CLAN_RS04500	PWY-5686	UMP biosynthesis
CLAN_RS04510	PWY-2941	L-lysine biosynthesis II
CLAN_RS04510	PWY-2942	L-lysine biosynthesis III
CLAN_RS04510	PWY-5097	L-lysine biosynthesis VI
CLAN_RS04520	PWY-5269	cardiolipin biosynthesis II
CLAN_RS04520	PWY-5668	cardiolipin biosynthesis I
CLAN_RS04520	PWY-7817	CLAN_RS04520
CLAN_RS04555	PWY-5667	CDP-diacylglycerol biosynthesis I
CLAN_RS04555	PWY-5981	CDP-diacylglycerol biosynthesis III
CLAN_RS04565	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CLAN_RS04565	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CLAN_RS04565	PWY-6897	thiamin salvage II
CLAN_RS04565	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CLAN_RS04565	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CLAN_RS04565	PWY-7356	thiamin salvage IV (yeast)
CLAN_RS04565	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLAN_RS04640	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CLAN_RS04640	PWY-5667	CDP-diacylglycerol biosynthesis I
CLAN_RS04640	PWY-6453	stigma estolide biosynthesis
CLAN_RS04640	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CLAN_RS04640	PWY-7587	oleate biosynthesis III (cyanobacteria)
CLAN_RS04645	PWY-7851	CLAN_RS04645
CLAN_RS04725	PWY-6605	adenine and adenosine salvage II
CLAN_RS04725	PWY-6610	adenine and adenosine salvage IV
CLAN_RS04725	PWY-7805	CLAN_RS04725
CLAN_RS04725	PWY-7807	CLAN_RS04725
CLAN_RS04745	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CLAN_RS04745	PWY-2201	folate transformations I
CLAN_RS04745	PWY-3841	folate transformations II
CLAN_RS04745	PWY-5030	L-histidine degradation III
CLAN_RS04745	PWY-5497	purine nucleobases degradation II (anaerobic)
CLAN_RS04745	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CLAN_RS04755	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLAN_RS04805	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLAN_RS04950	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLAN_RS04955	PWY-6703	preQ<sub>0</sub> biosynthesis
CLAN_RS04960	PWY-6749	CMP-legionaminate biosynthesis I
CLAN_RS04970	PWY-6891	thiazole biosynthesis II (Bacillus)
CLAN_RS04970	PWY-6892	thiazole biosynthesis I (E. coli)
CLAN_RS04975	PWY-6892	thiazole biosynthesis I (E. coli)
CLAN_RS04975	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLAN_RS05070	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CLAN_RS05070	PWY-6153	autoinducer AI-2 biosynthesis I
CLAN_RS05070	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CLAN_RS05100	PWY-1042	glycolysis IV (plant cytosol)
CLAN_RS05100	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLAN_RS05100	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLAN_RS05100	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLAN_RS05100	PWY-7385	1,3-propanediol biosynthesis (engineered)
CLAN_RS05135	PWY-5747	2-methylcitrate cycle II
CLAN_RS05150	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLAN_RS05150	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CLAN_RS05165	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLAN_RS05200	PWY-7294	xylose degradation IV
CLAN_RS05200	PWY-7295	L-arabinose degradation IV
CLAN_RS05215	PWY-7799	CLAN_RS05215
CLAN_RS05290	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLAN_RS05290	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CLAN_RS05325	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CLAN_RS05325	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CLAN_RS05325	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CLAN_RS05335	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS05340	PWY-7805	CLAN_RS05340
CLAN_RS05340	PWY-7807	CLAN_RS05340
CLAN_RS05360	PWY-3781	aerobic respiration I (cytochrome c)
CLAN_RS05360	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CLAN_RS05360	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CLAN_RS05360	PWY-5690	TCA cycle II (plants and fungi)
CLAN_RS05360	PWY-6728	methylaspartate cycle
CLAN_RS05360	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLAN_RS05360	PWY-7254	TCA cycle VII (acetate-producers)
CLAN_RS05360	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CLAN_RS05385	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLAN_RS05385	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLAN_RS05400	PWY-5344	L-homocysteine biosynthesis
CLAN_RS05405	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLAN_RS05405	PWY-6596	adenosine nucleotides degradation I
CLAN_RS05405	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS05410	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CLAN_RS05435	PWY-6700	queuosine biosynthesis
CLAN_RS05520	PWY-5392	reductive TCA cycle II
CLAN_RS05520	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CLAN_RS05520	PWY-5690	TCA cycle II (plants and fungi)
CLAN_RS05520	PWY-5913	TCA cycle VI (obligate autotrophs)
CLAN_RS05520	PWY-6728	methylaspartate cycle
CLAN_RS05520	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLAN_RS05520	PWY-7254	TCA cycle VII (acetate-producers)
CLAN_RS05520	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CLAN_RS05550	PWY-6910	hydroxymethylpyrimidine salvage
CLAN_RS05550	PWY-7356	thiamin salvage IV (yeast)
CLAN_RS05550	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLAN_RS05570	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLAN_RS05650	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CLAN_RS05650	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CLAN_RS05655	PWY-4983	L-citrulline-nitric oxide cycle
CLAN_RS05655	PWY-4984	urea cycle
CLAN_RS05655	PWY-5	canavanine biosynthesis
CLAN_RS05655	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLAN_RS05655	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLAN_RS05765	PWY-6871	3-methylbutanol biosynthesis
CLAN_RS05770	PWY-5669	phosphatidylethanolamine biosynthesis I
CLAN_RS05860	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLAN_RS05860	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLAN_RS05865	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLAN_RS05865	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CLAN_RS05865	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLAN_RS05870	PWY-1042	glycolysis IV (plant cytosol)
CLAN_RS05870	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLAN_RS05870	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLAN_RS05870	PWY-5723	Rubisco shunt
CLAN_RS05870	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLAN_RS05870	PWY-6886	1-butanol autotrophic biosynthesis
CLAN_RS05870	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS05870	PWY-7003	glycerol degradation to butanol
CLAN_RS05870	PWY-7124	ethylene biosynthesis V (engineered)
CLAN_RS05870	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLAN_RS05875	PWY-5367	petroselinate biosynthesis
CLAN_RS05875	PWY-5515	L-arabinose degradation II
CLAN_RS05875	PWY-5525	D-glucuronate degradation I
CLAN_RS05875	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CLAN_RS05875	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CLAN_RS05875	PWY-5989	stearate biosynthesis II (bacteria and plants)
CLAN_RS05875	PWY-5994	palmitate biosynthesis I (animals and fungi)
CLAN_RS05875	PWY-6113	superpathway of mycolate biosynthesis
CLAN_RS05875	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CLAN_RS05875	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CLAN_RS05875	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLAN_RS05875	PWY-7663	gondoate biosynthesis (anaerobic)
CLAN_RS05875	PWY-7664	oleate biosynthesis IV (anaerobic)
CLAN_RS05875	PWY-7858	CLAN_RS05875
CLAN_RS05875	PWYG-321	mycolate biosynthesis
CLAN_RS05890	PWY-6679	jadomycin biosynthesis
CLAN_RS05890	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLAN_RS06075	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CLAN_RS06075	PWY-6153	autoinducer AI-2 biosynthesis I
CLAN_RS06075	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CLAN_RS06080	PWY-4381	fatty acid biosynthesis initiation I
CLAN_RS06080	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CLAN_RS06080	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLAN_RS06125	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS06135	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS06175	PWY-3341	L-proline biosynthesis III
CLAN_RS06175	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CLAN_RS06205	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLAN_RS06205	PWY-6143	CMP-pseudaminate biosynthesis
CLAN_RS06230	PWY-6143	CMP-pseudaminate biosynthesis
CLAN_RS06235	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
CLAN_RS06235	PWY-6749	CMP-legionaminate biosynthesis I
CLAN_RS06235	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
CLAN_RS06235	PWY-7102	bisabolene biosynthesis
CLAN_RS06235	PWY-7131	CMP-legionaminate biosynthesis II
CLAN_RS06235	PWY-7721	CLAN_RS06235
CLAN_RS06235	PWY-7736	CLAN_RS06235
CLAN_RS06255	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLAN_RS06300	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CLAN_RS06300	PWY-6148	tetrahydromethanopterin biosynthesis
CLAN_RS06300	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CLAN_RS06300	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CLAN_RS06300	PWY-7852	CLAN_RS06300
CLAN_RS06300	PWY-7853	CLAN_RS06300
CLAN_RS06305	PWY-7799	CLAN_RS06305
CLAN_RS06305	PWY-7800	CLAN_RS06305
CLAN_RS06310	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLAN_RS06310	PWY-6416	quinate degradation II
CLAN_RS06310	PWY-6707	gallate biosynthesis
CLAN_RS06345	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CLAN_RS06345	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CLAN_RS06345	PWY-7622	UDP-galactofuranose biosynthesis
CLAN_RS06440	PWY-5686	UMP biosynthesis
CLAN_RS06440	PWY-7790	CLAN_RS06440
CLAN_RS06440	PWY-7791	CLAN_RS06440
CLAN_RS06450	PWY-6167	flavin biosynthesis II (archaea)
CLAN_RS06450	PWY-6168	flavin biosynthesis III (fungi)
CLAN_RS06465	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLAN_RS06465	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CLAN_RS06555	PWY-3781	aerobic respiration I (cytochrome c)
CLAN_RS06555	PWY-4521	arsenite oxidation I (respiratory)
CLAN_RS06555	PWY-6692	Fe(II) oxidation
CLAN_RS06555	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CLAN_RS06570	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLAN_RS06570	PWY-5686	UMP biosynthesis
CLAN_RS06570	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLAN_RS06570	PWY-7790	CLAN_RS06570
CLAN_RS06570	PWY-7791	CLAN_RS06570
CLAN_RS06590	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS06660	PWY-5958	acridone alkaloid biosynthesis
CLAN_RS06660	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CLAN_RS06660	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CLAN_RS06665	PWY-5958	acridone alkaloid biosynthesis
CLAN_RS06665	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CLAN_RS06665	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CLAN_RS06740	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLAN_RS06740	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLAN_RS06740	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLAN_RS06740	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CLAN_RS06745	PWY-2941	L-lysine biosynthesis II
CLAN_RS06745	PWY-2942	L-lysine biosynthesis III
CLAN_RS06745	PWY-5097	L-lysine biosynthesis VI
CLAN_RS06765	PWY-5525	D-glucuronate degradation I
CLAN_RS06790	PWY-702	L-methionine biosynthesis II
CLAN_RS06800	PWY-2201	folate transformations I
CLAN_RS06800	PWY-5497	purine nucleobases degradation II (anaerobic)
CLAN_RS06810	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CLAN_RS06835	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CLAN_RS06835	PWY-6148	tetrahydromethanopterin biosynthesis
CLAN_RS06835	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CLAN_RS06835	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CLAN_RS06845	PWY-4381	fatty acid biosynthesis initiation I
CLAN_RS06865	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLAN_RS06865	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CLAN_RS06865	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLAN_RS06865	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLAN_RS06865	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CLAN_RS06865	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLAN_RS06865	PWY-7205	CMP phosphorylation
CLAN_RS06865	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLAN_RS06865	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLAN_RS06865	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS06865	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLAN_RS06865	PWY-7224	purine deoxyribonucleosides salvage
CLAN_RS06865	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLAN_RS06865	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CLAN_RS06895	PWY-2201	folate transformations I
CLAN_RS06915	PWY-6703	preQ<sub>0</sub> biosynthesis
CLAN_RS06940	PWY-2781	<i>cis</i>-zeatin biosynthesis
CLAN_RS06950	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CLAN_RS06950	PWY-5368	dimorphecolate biosynthesis
CLAN_RS06950	PWY-5995	linoleate biosynthesis I (plants)
CLAN_RS06950	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CLAN_RS06950	PWY-6803	phosphatidylcholine acyl editing
CLAN_RS06950	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CLAN_RS06950	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CLAN_RS06950	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CLAN_RS06950	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CLAN_RS06950	PWY-7470	phosphatidylcholine biosynthesis VII
CLAN_RS06950	PWY-7618	ricinoleate biosynthesis
CLAN_RS06960	PWY-7294	xylose degradation IV
CLAN_RS06960	PWY-7295	L-arabinose degradation IV
CLAN_RS06960	PWY-7560	methylerythritol phosphate pathway II
CLAN_RS07005	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLAN_RS07025	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CLAN_RS07025	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CLAN_RS07035	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLAN_RS07055	PWY-1042	glycolysis IV (plant cytosol)
CLAN_RS07055	PWY-1622	formaldehyde assimilation I (serine pathway)
CLAN_RS07055	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLAN_RS07055	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLAN_RS07055	PWY-5723	Rubisco shunt
CLAN_RS07055	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLAN_RS07055	PWY-6143	CMP-pseudaminate biosynthesis
CLAN_RS07055	PWY-6886	1-butanol autotrophic biosynthesis
CLAN_RS07055	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS07055	PWY-7003	glycerol degradation to butanol
CLAN_RS07055	PWY-7124	ethylene biosynthesis V (engineered)
CLAN_RS07055	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLAN_RS07055	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
CLAN_RS07055	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
CLAN_RS07055	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
CLAN_RS07055	PWY-7719	CLAN_RS07055
CLAN_RS07085	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CLAN_RS07085	PWY-5743	3-hydroxypropanoate cycle
CLAN_RS07085	PWY-5744	glyoxylate assimilation
CLAN_RS07085	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CLAN_RS07085	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLAN_RS07085	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CLAN_RS07085	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CLAN_RS07130	PWY-6749	CMP-legionaminate biosynthesis I
CLAN_RS07270	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CLAN_RS07300	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CLAN_RS07300	PWY-7177	UTP and CTP dephosphorylation II
CLAN_RS07300	PWY-7185	UTP and CTP dephosphorylation I
CLAN_RS07305	PWY-7805	CLAN_RS07305
CLAN_RS07305	PWY-7807	CLAN_RS07305
CLAN_RS07315	PWY-5101	L-isoleucine biosynthesis II
CLAN_RS07315	PWY-5103	L-isoleucine biosynthesis III
CLAN_RS07315	PWY-5104	L-isoleucine biosynthesis IV
CLAN_RS07315	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLAN_RS07360	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CLAN_RS07360	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CLAN_RS07360	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLAN_RS07360	PWY-6936	seleno-amino acid biosynthesis
CLAN_RS07360	PWY-702	L-methionine biosynthesis II
CLAN_RS07485	PWY-6012	acyl carrier protein metabolism I
CLAN_RS07485	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CLAN_RS07495	PWY-2941	L-lysine biosynthesis II
CLAN_RS07495	PWY-5097	L-lysine biosynthesis VI
CLAN_RS07510	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLAN_RS07510	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLAN_RS07515	PWY-6803	phosphatidylcholine acyl editing
CLAN_RS07515	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CLAN_RS07515	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CLAN_RS07515	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CLAN_RS07515	PWY-7783	CLAN_RS07515
CLAN_RS07540	PWY-6823	molybdenum cofactor biosynthesis
CLAN_RS07550	PWY-5392	reductive TCA cycle II
CLAN_RS07550	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CLAN_RS07550	PWY-5690	TCA cycle II (plants and fungi)
CLAN_RS07550	PWY-5913	TCA cycle VI (obligate autotrophs)
CLAN_RS07550	PWY-6728	methylaspartate cycle
CLAN_RS07550	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLAN_RS07550	PWY-7254	TCA cycle VII (acetate-producers)
CLAN_RS07550	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CLAN_RS07570	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS07615	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLAN_RS07710	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLAN_RS07710	PWY-5723	Rubisco shunt
CLAN_RS07710	PWY-6891	thiazole biosynthesis II (Bacillus)
CLAN_RS07710	PWY-6892	thiazole biosynthesis I (E. coli)
CLAN_RS07710	PWY-6901	superpathway of glucose and xylose degradation
CLAN_RS07710	PWY-7560	methylerythritol phosphate pathway II
CLAN_RS07730	PWY-5155	&beta;-alanine biosynthesis III
CLAN_RS07795	PWY-7799	CLAN_RS07795
CLAN_RS07795	PWY-7800	CLAN_RS07795
CLAN_RS07940	PWY-6854	ethylene biosynthesis III (microbes)
CLAN_RS08020	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLAN_RS08020	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLAN_RS08020	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLAN_RS08020	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLAN_RS08020	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLAN_RS08020	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLAN_RS08020	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLAN_RS08020	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CLAN_RS08025	PWY-5381	pyridine nucleotide cycling (plants)
CLAN_RS08035	PWY-5269	cardiolipin biosynthesis II
CLAN_RS08035	PWY-5668	cardiolipin biosynthesis I
CLAN_RS08035	PWY-7817	CLAN_RS08035
CLAN_RS08040	PWY-5278	sulfite oxidation III
CLAN_RS08040	PWY-5340	sulfate activation for sulfonation
CLAN_RS08040	PWY-6683	sulfate reduction III (assimilatory)
CLAN_RS08040	PWY-6932	selenate reduction
CLAN_RS08050	PWY-7560	methylerythritol phosphate pathway II
CLAN_RS08055	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CLAN_RS08065	PWY-5958	acridone alkaloid biosynthesis
CLAN_RS08065	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CLAN_RS08065	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CLAN_RS08070	PWY-5958	acridone alkaloid biosynthesis
CLAN_RS08070	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CLAN_RS08070	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CLAN_RS08185	PWY-2201	folate transformations I
CLAN_RS08195	PWY-6123	inosine-5'-phosphate biosynthesis I
CLAN_RS08195	PWY-6124	inosine-5'-phosphate biosynthesis II
CLAN_RS08195	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLAN_RS08195	PWY-7234	inosine-5'-phosphate biosynthesis III
CLAN_RS08200	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLAN_RS08200	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLAN_RS08200	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLAN_RS08200	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLAN_RS08200	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLAN_RS08200	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLAN_RS08200	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLAN_RS08200	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
