UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 131 151 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 PANTHER PTHR11918:SF43 1 419 6.8E-125 T 23-04-2016 UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 Pfam PF01938 TRAM domain 363 419 1.3E-7 T 23-04-2016 IPR002792 TRAM domain UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 PANTHER PTHR11918 1 419 6.8E-125 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 418 7.7E-179 T 23-04-2016 UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 Gene3D G3DSA:3.80.30.20 127 356 1.7E-70 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 Pfam PF04055 Radical SAM superfamily 131 305 9.7E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 419 60.556 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 Pfam PF00919 Uncharacterized protein family UPF0004 1 89 1.0E-22 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 SUPERFAMILY SSF102114 100 352 1.12E-52 T 23-04-2016 UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 412 6.2E-134 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 UPTC3659_RS01715 3ab9f282ecf51ae9e06a3591664421b7 419 SMART SM00729 127 345 3.0E-52 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS01350 9f447169529f85d79a05a926c7ee079a 193 PANTHER PTHR16301 1 193 4.5E-39 T 23-04-2016 IPR023582 Impact family UPTC3659_RS01350 9f447169529f85d79a05a926c7ee079a 193 Pfam PF09186 Domain of unknown function (DUF1949) 135 180 4.7E-5 T 23-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal UPTC3659_RS01350 9f447169529f85d79a05a926c7ee079a 193 Gene3D G3DSA:3.30.230.30 2 126 1.1E-37 T 23-04-2016 IPR001498 Impact, N-terminal UPTC3659_RS01350 9f447169529f85d79a05a926c7ee079a 193 SUPERFAMILY SSF54211 2 126 1.82E-36 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS01350 9f447169529f85d79a05a926c7ee079a 193 Pfam PF01205 Uncharacterized protein family UPF0029 15 119 2.8E-23 T 23-04-2016 IPR001498 Impact, N-terminal UPTC3659_RS05720 d99213066a9fb36b4907ef204994e3c8 162 PANTHER PTHR23089 1 154 7.1E-52 T 23-04-2016 IPR001310 Histidine triad (HIT) protein UPTC3659_RS05720 d99213066a9fb36b4907ef204994e3c8 162 SUPERFAMILY SSF54197 1 154 3.56E-38 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 UPTC3659_RS05720 d99213066a9fb36b4907ef204994e3c8 162 Gene3D G3DSA:3.30.428.10 15 160 1.0E-31 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 UPTC3659_RS05720 d99213066a9fb36b4907ef204994e3c8 162 Pfam PF01230 HIT domain 38 127 7.1E-12 T 23-04-2016 IPR001310 Histidine triad (HIT) protein UPTC3659_RS05720 d99213066a9fb36b4907ef204994e3c8 162 PANTHER PTHR23089:SF16 1 154 7.1E-52 T 23-04-2016 UPTC3659_RS06655 ad8140d3a41c662acad48d43447e6ca6 370 PANTHER PTHR30483:SF6 5 364 8.0E-66 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 UPTC3659_RS06655 ad8140d3a41c662acad48d43447e6ca6 370 Gene3D G3DSA:3.40.50.2300 20 216 3.4E-47 T 23-04-2016 UPTC3659_RS06655 ad8140d3a41c662acad48d43447e6ca6 370 PANTHER PTHR30483 5 364 8.0E-66 T 23-04-2016 UPTC3659_RS06655 ad8140d3a41c662acad48d43447e6ca6 370 SUPERFAMILY SSF53822 20 364 4.21E-76 T 23-04-2016 IPR028082 Periplasmic binding protein-like I UPTC3659_RS06655 ad8140d3a41c662acad48d43447e6ca6 370 Pfam PF13458 Periplasmic binding protein 20 358 1.4E-48 T 23-04-2016 IPR028081 Leucine-binding protein domain UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 19 438 8.2E-164 T 23-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 SUPERFAMILY SSF50465 337 439 3.38E-28 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 Gene3D G3DSA:3.40.50.300 5 228 1.1E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 Pfam PF03143 Elongation factor Tu C-terminal domain 335 441 2.5E-6 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 PRINTS PR00315 GTP-binding elongation factor signature 116 127 1.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 PRINTS PR00315 GTP-binding elongation factor signature 19 32 1.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 PRINTS PR00315 GTP-binding elongation factor signature 153 162 1.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 PRINTS PR00315 GTP-binding elongation factor signature 100 110 1.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 PRINTS PR00315 GTP-binding elongation factor signature 80 88 1.9E-13 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 SUPERFAMILY SSF50447 233 333 1.39E-14 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 Gene3D G3DSA:2.40.30.10 234 345 5.7E-13 T 23-04-2016 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 SUPERFAMILY SSF52540 10 228 3.05E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 Gene3D G3DSA:2.40.30.10 346 441 5.8E-9 T 23-04-2016 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 73 88 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 PANTHER PTHR23115:SF38 1 457 7.6E-57 T 23-04-2016 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 Pfam PF00009 Elongation factor Tu GTP binding domain 17 222 2.6E-40 T 23-04-2016 UPTC3659_RS01645 9e9e1a4476f24fdd6a1864e14f7c5b2f 474 PANTHER PTHR23115 1 457 7.6E-57 T 23-04-2016 UPTC3659_RS05760 d7a9f06a567383edff3105f50838bd2c 1290 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 81 154 9.7E-15 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS05760 d7a9f06a567383edff3105f50838bd2c 1290 SMART SM00912 41 157 5.2E-14 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS05760 d7a9f06a567383edff3105f50838bd2c 1290 Pfam PF05860 haemagglutination activity domain 44 157 9.0E-15 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS05760 d7a9f06a567383edff3105f50838bd2c 1290 SUPERFAMILY SSF51126 36 262 2.26E-18 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor UPTC3659_RS06445 83fed1456f2a762023119b1d5fd6182c 285 Gene3D G3DSA:3.30.360.10 127 283 4.1E-21 T 23-04-2016 UPTC3659_RS06445 83fed1456f2a762023119b1d5fd6182c 285 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 112 9.8E-17 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 UPTC3659_RS06445 83fed1456f2a762023119b1d5fd6182c 285 PANTHER PTHR22604 1 285 1.5E-42 T 23-04-2016 UPTC3659_RS06445 83fed1456f2a762023119b1d5fd6182c 285 SUPERFAMILY SSF55347 117 265 6.54E-12 T 23-04-2016 UPTC3659_RS06445 83fed1456f2a762023119b1d5fd6182c 285 PANTHER PTHR22604:SF14 1 285 1.5E-42 T 23-04-2016 UPTC3659_RS06445 83fed1456f2a762023119b1d5fd6182c 285 SUPERFAMILY SSF51735 1 169 6.79E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS06445 83fed1456f2a762023119b1d5fd6182c 285 Gene3D G3DSA:3.40.50.720 1 126 2.1E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 Hamap MF_00071 Elongation factor 4 [lepA]. 1 596 282.83 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 SMART SM00838 398 486 0.0038 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 PRINTS PR00315 GTP-binding elongation factor signature 73 83 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 PRINTS PR00315 GTP-binding elongation factor signature 89 100 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 PRINTS PR00315 GTP-binding elongation factor signature 125 134 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 PRINTS PR00315 GTP-binding elongation factor signature 49 57 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 Gene3D G3DSA:3.30.70.240 401 487 1.7E-20 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 Gene3D G3DSA:3.30.70.870 293 369 5.1E-23 T 23-04-2016 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 SUPERFAMILY SSF50447 181 285 1.34E-20 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 PANTHER PTHR23115 3 373 2.2E-265 T 23-04-2016 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 PANTHER PTHR23115 401 596 2.2E-265 T 23-04-2016 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 TIGRFAM TIGR01393 lepA: elongation factor 4 2 596 1.7E-301 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 Pfam PF00679 Elongation factor G C-terminus 399 485 1.8E-22 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 Pfam PF00009 Elongation factor Tu GTP binding domain 2 180 1.1E-55 T 23-04-2016 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 Gene3D G3DSA:3.40.50.300 2 192 2.1E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 SUPERFAMILY SSF54980 293 370 3.27E-16 T 23-04-2016 IPR009022 Elongation factor G, III-V domain UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 PANTHER PTHR23115:SF97 3 373 2.2E-265 T 23-04-2016 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 PANTHER PTHR23115:SF97 401 596 2.2E-265 T 23-04-2016 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 SUPERFAMILY SSF52540 2 204 5.72E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 Pfam PF03144 Elongation factor Tu domain 2 204 275 2.6E-10 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 Pfam PF06421 GTP-binding protein LepA C-terminus 489 594 2.1E-46 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 175 3.3E-21 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 SUPERFAMILY SSF54980 399 494 1.2E-23 T 23-04-2016 IPR009022 Elongation factor G, III-V domain UPTC3659_RS06695 47b6f453ee60dfddded103818c984310 596 Gene3D G3DSA:2.40.30.10 193 289 5.6E-24 T 23-04-2016 UPTC3659_RS05755 3e9b5d1be16f2baaa5f986c7751e9a70 218 Pfam PF01223 DNA/RNA non-specific endonuclease 37 196 6.4E-31 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 UPTC3659_RS05755 3e9b5d1be16f2baaa5f986c7751e9a70 218 SUPERFAMILY SSF54060 32 215 2.18E-44 T 23-04-2016 UPTC3659_RS05755 3e9b5d1be16f2baaa5f986c7751e9a70 218 PANTHER PTHR13966 36 183 8.7E-21 T 23-04-2016 UPTC3659_RS05755 3e9b5d1be16f2baaa5f986c7751e9a70 218 SMART SM00892 38 211 8.0E-24 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 UPTC3659_RS05755 3e9b5d1be16f2baaa5f986c7751e9a70 218 Gene3D G3DSA:3.40.570.10 28 199 1.7E-38 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 UPTC3659_RS05755 3e9b5d1be16f2baaa5f986c7751e9a70 218 SMART SM00477 39 214 1.0E-10 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 PANTHER PTHR30050:SF2 1 437 3.7E-143 T 23-04-2016 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 Gene3D G3DSA:1.10.8.60 268 335 1.6E-21 T 23-04-2016 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 434 5.6E-137 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 SMART SM00760 344 413 1.6E-29 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 Pfam PF11638 DnaA N-terminal domain 5 60 6.9E-8 T 23-04-2016 IPR024633 DnaA N-terminal domain UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 Gene3D G3DSA:1.10.1750.10 336 434 1.1E-31 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 SUPERFAMILY SSF52540 102 310 7.11E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 435 28.077 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 345 413 2.9E-22 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 SUPERFAMILY SSF48295 332 434 2.46E-31 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 232 259 8.0E-38 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 8.0E-38 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 136 156 8.0E-38 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 394 413 8.0E-38 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 180 8.0E-38 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 PANTHER PTHR30050 1 437 3.7E-143 T 23-04-2016 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 Pfam PF00308 Bacterial dnaA protein 101 316 6.3E-73 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 SMART SM00382 135 261 3.5E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 ProSitePatterns PS01008 DnaA protein signature. 394 413 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 UPTC3659_RS00005 39136a2b24d5501ab11cfeb1aafd8cc2 442 Gene3D G3DSA:3.40.50.300 98 265 6.2E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 123 616 1.4E-215 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 Gene3D G3DSA:3.40.50.300 169 355 4.0E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 15 624 34.462 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 Gene3D G3DSA:1.10.8.60 356 422 2.5E-23 T 23-04-2016 UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 Pfam PF01434 Peptidase family M41 408 615 1.7E-67 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 PANTHER PTHR23076 6 616 7.7E-259 T 23-04-2016 UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 SMART SM00382 208 349 4.2E-24 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 SUPERFAMILY SSF140990 429 619 7.46E-60 T 23-04-2016 UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 Pfam PF06480 FtsH Extracellular 23 116 5.8E-8 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 SUPERFAMILY SSF52540 171 441 7.77E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 345 1.4E-43 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS07440 56f75f48e3c1728f031e9563a1101ec4 640 ProSitePatterns PS00674 AAA-protein family signature. 317 335 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 UPTC3659_RS00865 2cbe8d5c48d5ea7a9806fd3e73cb3064 258 Gene3D G3DSA:3.90.78.10 189 258 7.6E-26 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00865 2cbe8d5c48d5ea7a9806fd3e73cb3064 258 SUPERFAMILY SSF56176 29 163 4.9E-13 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 UPTC3659_RS00865 2cbe8d5c48d5ea7a9806fd3e73cb3064 258 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 258 42.209 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00865 2cbe8d5c48d5ea7a9806fd3e73cb3064 258 SUPERFAMILY SSF56194 173 258 2.22E-26 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00865 2cbe8d5c48d5ea7a9806fd3e73cb3064 258 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 27 258 3.5E-46 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00865 2cbe8d5c48d5ea7a9806fd3e73cb3064 258 Gene3D G3DSA:4.10.280.10 44 64 9.5E-4 T 23-04-2016 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain GO:0046983 UPTC3659_RS00865 2cbe8d5c48d5ea7a9806fd3e73cb3064 258 PANTHER PTHR21071 31 258 2.7E-40 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00865 2cbe8d5c48d5ea7a9806fd3e73cb3064 258 Gene3D G3DSA:3.30.465.10 65 188 3.8E-22 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 UPTC3659_RS00865 2cbe8d5c48d5ea7a9806fd3e73cb3064 258 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 173 258 1.9E-22 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS07535 058819ae083121e827f26824b7676a38 189 Pfam PF05494 MlaC protein 29 183 1.3E-32 T 23-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC UPTC3659_RS07535 058819ae083121e827f26824b7676a38 189 Gene3D G3DSA:1.10.10.640 158 183 4.6E-12 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical UPTC3659_RS07535 058819ae083121e827f26824b7676a38 189 Gene3D G3DSA:1.10.10.640 62 102 4.6E-12 T 23-04-2016 IPR023094 Toluene tolerance protein, alpha-helical UPTC3659_RS07535 058819ae083121e827f26824b7676a38 189 PANTHER PTHR36573 1 185 8.2E-20 T 23-04-2016 UPTC3659_RS07535 058819ae083121e827f26824b7676a38 189 Gene3D G3DSA:3.10.450.50 105 157 1.1E-7 T 23-04-2016 IPR032710 NTF2-like domain UPTC3659_RS07535 058819ae083121e827f26824b7676a38 189 Gene3D G3DSA:3.10.450.50 25 61 1.1E-7 T 23-04-2016 IPR032710 NTF2-like domain UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 SUPERFAMILY SSF51735 7 253 1.48E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 PANTHER PTHR24322 159 194 1.5E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 PANTHER PTHR24322 14 143 1.5E-23 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.0E-17 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 250 8.3E-35 T 23-04-2016 UPTC3659_RS07680 0ec4f4ec04220f1057b67cd394ad2fb8 255 Gene3D G3DSA:3.40.50.720 5 252 1.1E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS03790 d982b9961bc70493a24deedaea581314 608 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 2 593 2.8E-179 T 23-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 UPTC3659_RS03790 d982b9961bc70493a24deedaea581314 608 SUPERFAMILY SSF56601 236 594 5.63E-86 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS03790 d982b9961bc70493a24deedaea581314 608 Pfam PF03717 Penicillin-binding Protein dimerisation domain 48 222 4.3E-29 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UPTC3659_RS03790 d982b9961bc70493a24deedaea581314 608 SUPERFAMILY SSF56519 41 229 4.58E-33 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UPTC3659_RS03790 d982b9961bc70493a24deedaea581314 608 PANTHER PTHR30627 1 595 2.9E-154 T 23-04-2016 UPTC3659_RS03790 d982b9961bc70493a24deedaea581314 608 PANTHER PTHR30627:SF2 1 595 2.9E-154 T 23-04-2016 UPTC3659_RS03790 d982b9961bc70493a24deedaea581314 608 Gene3D G3DSA:3.90.1310.10 140 229 2.9E-22 T 23-04-2016 UPTC3659_RS03790 d982b9961bc70493a24deedaea581314 608 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 590 2.9E-63 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UPTC3659_RS03790 d982b9961bc70493a24deedaea581314 608 Gene3D G3DSA:3.40.710.10 235 594 1.6E-94 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS03870 5fc3d6978251e7478ff52b37870d7ca5 240 SUPERFAMILY SSF53335 24 168 3.46E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03870 5fc3d6978251e7478ff52b37870d7ca5 240 Pfam PF01728 FtsJ-like methyltransferase 60 236 6.4E-18 T 23-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 UPTC3659_RS03870 5fc3d6978251e7478ff52b37870d7ca5 240 Gene3D G3DSA:3.40.50.150 63 165 1.0E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03870 5fc3d6978251e7478ff52b37870d7ca5 240 PANTHER PTHR32319 1 240 1.7E-51 T 23-04-2016 UPTC3659_RS03870 5fc3d6978251e7478ff52b37870d7ca5 240 PANTHER PTHR32319:SF0 1 240 1.7E-51 T 23-04-2016 UPTC3659_RS03870 5fc3d6978251e7478ff52b37870d7ca5 240 Gene3D G3DSA:3.10.290.10 1 41 7.7E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS05590 d2ac419763dabac64db3ab99240f7f00 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 19 239 3.4E-56 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UPTC3659_RS05590 d2ac419763dabac64db3ab99240f7f00 254 Gene3D G3DSA:3.40.190.10 96 197 2.2E-19 T 23-04-2016 UPTC3659_RS05590 d2ac419763dabac64db3ab99240f7f00 254 PANTHER PTHR18966:SF152 17 243 5.7E-39 T 23-04-2016 UPTC3659_RS05590 d2ac419763dabac64db3ab99240f7f00 254 SUPERFAMILY SSF53850 1 239 6.21E-61 T 23-04-2016 UPTC3659_RS05590 d2ac419763dabac64db3ab99240f7f00 254 Gene3D G3DSA:3.40.190.10 16 95 3.0E-38 T 23-04-2016 UPTC3659_RS05590 d2ac419763dabac64db3ab99240f7f00 254 Gene3D G3DSA:3.40.190.10 200 239 3.0E-38 T 23-04-2016 UPTC3659_RS05590 d2ac419763dabac64db3ab99240f7f00 254 PANTHER PTHR18966 17 243 5.7E-39 T 23-04-2016 UPTC3659_RS05590 d2ac419763dabac64db3ab99240f7f00 254 SMART SM00079 18 240 2.4E-6 T 23-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 UPTC3659_RS05590 d2ac419763dabac64db3ab99240f7f00 254 SMART SM00062 18 241 4.0E-61 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 SUPERFAMILY SSF56322 26 356 4.45E-91 T 23-04-2016 IPR005801 ADC synthase GO:0009058 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 Gene3D G3DSA:3.20.10.10 474 577 6.2E-28 T 23-04-2016 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 PANTHER PTHR11236:SF18 32 433 1.2E-107 T 23-04-2016 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 PRINTS PR00095 Anthranilate synthase component I signature 290 304 4.6E-6 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 PRINTS PR00095 Anthranilate synthase component I signature 197 210 4.6E-6 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 PRINTS PR00095 Anthranilate synthase component I signature 211 224 4.6E-6 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 Gene3D G3DSA:3.60.120.10 85 352 1.5E-92 T 23-04-2016 IPR005801 ADC synthase GO:0009058 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 Pfam PF01063 Amino-transferase class IV 359 580 4.8E-29 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 SUPERFAMILY SSF56752 332 580 1.26E-33 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 Pfam PF00425 chorismate binding enzyme 96 349 1.4E-78 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 Gene3D G3DSA:3.30.470.10 353 403 2.8E-5 T 23-04-2016 UPTC3659_RS06020 5bb7307012e1d359488f37884d43551e 582 PANTHER PTHR11236 32 433 1.2E-107 T 23-04-2016 UPTC3659_RS06035 d4e82288fb6ae63c2a327e3246b2f6cf 314 SUPERFAMILY SSF103515 42 314 2.22E-38 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS06035 d4e82288fb6ae63c2a327e3246b2f6cf 314 SMART SM00869 46 297 1.7E-25 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS06035 d4e82288fb6ae63c2a327e3246b2f6cf 314 Gene3D G3DSA:2.40.128.130 45 314 1.8E-36 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS06035 d4e82288fb6ae63c2a327e3246b2f6cf 314 Pfam PF03797 Autotransporter beta-domain 44 287 2.3E-33 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS06035 d4e82288fb6ae63c2a327e3246b2f6cf 314 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 13 314 7.5E-26 T 23-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 UPTC3659_RS05600 82538bc13428f3054957814655b52330 274 PANTHER PTHR34383:SF1 16 233 1.4E-124 T 23-04-2016 UPTC3659_RS05600 82538bc13428f3054957814655b52330 274 PANTHER PTHR34383 16 233 1.4E-124 T 23-04-2016 UPTC3659_RS05600 82538bc13428f3054957814655b52330 274 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 13 237 7.4E-99 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related UPTC3659_RS05600 82538bc13428f3054957814655b52330 274 SUPERFAMILY SSF52540 43 230 3.22E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05600 82538bc13428f3054957814655b52330 274 PIRSF PIRSF028756 1 267 1.3E-111 T 23-04-2016 IPR016898 Polyphosphate kinase 2 UPTC3659_RS05600 82538bc13428f3054957814655b52330 274 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 13 238 9.4E-109 T 23-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 UPTC3659_RS05600 82538bc13428f3054957814655b52330 274 Gene3D G3DSA:3.40.50.300 11 256 4.0E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 Pfam PF00586 AIR synthase related protein, N-terminal domain 446 552 1.4E-16 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 Pfam PF00586 AIR synthase related protein, N-terminal domain 70 186 2.4E-20 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 725 275.816 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 SUPERFAMILY SSF56042 564 717 1.1E-20 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 Gene3D G3DSA:3.90.650.10 249 351 6.3E-6 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 Pfam PF02769 AIR synthase related protein, C-terminal domain 200 352 2.1E-32 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 PANTHER PTHR10099:SF2 4 707 3.1E-266 T 23-04-2016 UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 PANTHER PTHR10099 4 707 3.1E-266 T 23-04-2016 UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 SUPERFAMILY SSF55326 396 557 2.22E-40 T 23-04-2016 UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 PIRSF PIRSF001587 1 725 4.4E-279 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 SUPERFAMILY SSF56042 197 420 1.94E-51 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 SUPERFAMILY SSF55326 8 191 6.43E-49 T 23-04-2016 UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 Gene3D G3DSA:3.30.1330.10 43 192 1.5E-44 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 Gene3D G3DSA:3.30.1330.10 409 554 3.8E-45 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS02910 b8a89a50fe5bc68777878613e5c5b8c6 725 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 11 721 1.2E-277 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 SUPERFAMILY SSF52413 305 405 1.7E-19 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 PANTHER PTHR11374:SF4 2 405 4.4E-175 T 23-04-2016 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 SUPERFAMILY SSF51735 6 200 8.25E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 Gene3D G3DSA:3.40.50.720 3 229 1.7E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 SMART SM00984 318 409 9.6E-15 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 191 1.4E-58 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 6 403 8.9E-122 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 PIRSF PIRSF500136 2 408 1.0E-150 T 23-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 PANTHER PTHR11374 2 405 4.4E-175 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 SUPERFAMILY SSF48179 208 300 5.95E-29 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 295 2.1E-27 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 PIRSF PIRSF000124 5 406 7.8E-79 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 Gene3D G3DSA:3.40.50.720 240 399 7.8E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01580 b8a23f50dd7588ef8260fe24cd5cb211 409 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 405 6.8E-18 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 UPTC3659_RS08010 3ad5a45169675c7d740ed2d3f36f5244 374 Pfam PF00155 Aminotransferase class I and II 35 374 1.9E-40 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UPTC3659_RS08010 3ad5a45169675c7d740ed2d3f36f5244 374 Gene3D G3DSA:3.40.640.10 57 267 1.5E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS08010 3ad5a45169675c7d740ed2d3f36f5244 374 Gene3D G3DSA:3.90.1150.10 268 373 2.4E-19 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS08010 3ad5a45169675c7d740ed2d3f36f5244 374 SUPERFAMILY SSF53383 7 374 7.76E-74 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS08010 3ad5a45169675c7d740ed2d3f36f5244 374 PANTHER PTHR13693 1 374 1.6E-118 T 23-04-2016 UPTC3659_RS08010 3ad5a45169675c7d740ed2d3f36f5244 374 PANTHER PTHR13693:SF59 1 374 1.6E-118 T 23-04-2016 UPTC3659_RS04180 a2598aff6157e44f80c6a673f4a7de8a 136 Gene3D G3DSA:3.40.390.30 17 134 5.0E-36 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 UPTC3659_RS04180 a2598aff6157e44f80c6a673f4a7de8a 136 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 95 105 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site UPTC3659_RS04180 a2598aff6157e44f80c6a673f4a7de8a 136 SUPERFAMILY SSF55486 21 130 1.76E-31 T 23-04-2016 UPTC3659_RS04180 a2598aff6157e44f80c6a673f4a7de8a 136 Pfam PF02130 Uncharacterized protein family UPF0054 13 121 1.7E-32 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 UPTC3659_RS04180 a2598aff6157e44f80c6a673f4a7de8a 136 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 24 121 2.2E-28 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 UPTC3659_RS04180 a2598aff6157e44f80c6a673f4a7de8a 136 PANTHER PTHR22881 27 121 1.3E-17 T 23-04-2016 UPTC3659_RS04180 a2598aff6157e44f80c6a673f4a7de8a 136 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 127 19.094 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 UPTC3659_RS03630 e97332047c2130555d269d4e3428b413 587 Pfam PF00664 ABC transporter transmembrane region 29 291 2.2E-47 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 UPTC3659_RS03630 e97332047c2130555d269d4e3428b413 587 SUPERFAMILY SSF52540 338 574 4.9E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03630 e97332047c2130555d269d4e3428b413 587 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS03630 e97332047c2130555d269d4e3428b413 587 SUPERFAMILY SSF90123 11 327 2.88E-77 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 UPTC3659_RS03630 e97332047c2130555d269d4e3428b413 587 Gene3D G3DSA:1.20.1560.10 16 327 1.1E-78 T 23-04-2016 UPTC3659_RS03630 e97332047c2130555d269d4e3428b413 587 Gene3D G3DSA:3.40.50.300 340 577 6.0E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03630 e97332047c2130555d269d4e3428b413 587 PANTHER PTHR24221 1 585 9.3E-197 T 23-04-2016 UPTC3659_RS03630 e97332047c2130555d269d4e3428b413 587 SMART SM00382 368 552 7.5E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS03630 e97332047c2130555d269d4e3428b413 587 Pfam PF00005 ABC transporter 359 506 9.0E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS06005 c33cbf9ac40022e18cfb1043ce0d5f46 254 Pfam PF03797 Autotransporter beta-domain 2 227 1.1E-32 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS06005 c33cbf9ac40022e18cfb1043ce0d5f46 254 Gene3D G3DSA:2.40.128.130 6 254 4.0E-39 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS06005 c33cbf9ac40022e18cfb1043ce0d5f46 254 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 8 254 4.6E-21 T 23-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 UPTC3659_RS06005 c33cbf9ac40022e18cfb1043ce0d5f46 254 SUPERFAMILY SSF103515 6 254 4.97E-39 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS06005 c33cbf9ac40022e18cfb1043ce0d5f46 254 SMART SM00869 4 237 9.5E-19 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS00705 c777e74cd1e514fc48a888e3a5efd6be 229 SUPERFAMILY SSF52141 9 227 7.85E-86 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS00705 c777e74cd1e514fc48a888e3a5efd6be 229 Gene3D G3DSA:3.40.470.10 3 227 1.2E-91 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS00705 c777e74cd1e514fc48a888e3a5efd6be 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 226 38.755 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 UPTC3659_RS00705 c777e74cd1e514fc48a888e3a5efd6be 229 Pfam PF03167 Uracil DNA glycosylase superfamily 61 214 3.4E-23 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS00705 c777e74cd1e514fc48a888e3a5efd6be 229 PANTHER PTHR11264 1 227 9.2E-117 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 UPTC3659_RS00705 c777e74cd1e514fc48a888e3a5efd6be 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 UPTC3659_RS00705 c777e74cd1e514fc48a888e3a5efd6be 229 SMART SM00986 56 215 9.1E-32 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS00705 c777e74cd1e514fc48a888e3a5efd6be 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 217 2.8E-81 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 UPTC3659_RS00705 c777e74cd1e514fc48a888e3a5efd6be 229 SMART SM00987 56 215 9.1E-32 T 23-04-2016 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 PANTHER PTHR23135 1 422 1.7E-117 T 23-04-2016 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 Gene3D G3DSA:3.40.1190.10 90 291 6.5E-39 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 3 423 4.0E-120 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 SUPERFAMILY SSF53244 289 423 9.61E-29 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 PANTHER PTHR23135:SF5 1 422 1.7E-117 T 23-04-2016 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 Gene3D G3DSA:3.90.190.20 292 423 9.9E-32 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 Pfam PF02875 Mur ligase family, glutamate ligase domain 291 378 1.0E-14 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 Pfam PF01225 Mur ligase family, catalytic domain 3 101 2.5E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 SUPERFAMILY SSF53623 89 284 2.75E-37 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 Pfam PF08245 Mur ligase middle domain 106 270 9.6E-11 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 427 31.754 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 Gene3D G3DSA:3.40.50.720 2 88 2.2E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS06890 913f830f0d2fcc9c7b32db7a1f875d6f 430 SUPERFAMILY SSF51984 1 88 1.12E-27 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 Gene3D G3DSA:2.70.150.10 242 393 4.7E-26 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PANTHER PTHR24093:SF50 29 781 7.4E-160 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 SUPERFAMILY SSF56784 492 511 2.02E-41 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 SUPERFAMILY SSF56784 546 777 2.02E-41 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00943 Copper-transporting ATPase signature 262 281 5.2E-12 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00943 Copper-transporting ATPase signature 415 429 5.2E-12 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00943 Copper-transporting ATPase signature 476 491 5.2E-12 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00943 Copper-transporting ATPase signature 121 141 5.2E-12 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00943 Copper-transporting ATPase signature 711 725 5.2E-12 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00943 Copper-transporting ATPase signature 655 672 5.2E-12 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 SUPERFAMILY SSF81653 296 391 6.54E-20 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 Pfam PF00702 haloacid dehalogenase-like hydrolase 490 691 4.6E-28 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 231 778 8.9E-149 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 SUPERFAMILY SSF55008 73 143 2.62E-16 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 Gene3D G3DSA:3.30.70.100 78 155 4.6E-15 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 Pfam PF00403 Heavy-metal-associated domain 81 140 2.2E-8 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PANTHER PTHR24093 29 781 7.4E-160 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 264 762 6.5E-82 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 2 65 1.9E-10 T 23-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 Pfam PF00122 E1-E2 ATPase 263 484 1.0E-62 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 SUPERFAMILY SSF81665 235 296 1.01E-14 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 SUPERFAMILY SSF81665 393 487 1.01E-14 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 SUPERFAMILY SSF81665 726 764 1.01E-14 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00942 Copper-transporting ATPase 1 signature 100 121 9.8E-8 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00942 Copper-transporting ATPase 1 signature 194 214 9.8E-8 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00942 Copper-transporting ATPase 1 signature 214 239 9.8E-8 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 625 635 2.9E-16 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 493 507 2.9E-16 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 342 356 2.9E-16 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 677 696 2.9E-16 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 700 712 2.9E-16 T 23-04-2016 UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 Gene3D G3DSA:3.40.50.1000 467 509 3.4E-36 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 Gene3D G3DSA:3.40.50.1000 598 746 3.4E-36 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS02515 f50957f48edc7f7bbaa8fe2fb148a1bb 781 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 213 780 2.3E-135 T 23-04-2016 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 SUPERFAMILY SSF69742 1 159 2.48E-40 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 SUPERFAMILY SSF51735 164 308 2.46E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 100 123 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 157 8.3E-38 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 PANTHER PTHR13812:SF18 1 427 2.8E-79 T 23-04-2016 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 SUPERFAMILY SSF69075 312 413 4.05E-10 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 Gene3D G3DSA:3.40.50.720 168 304 9.0E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 315 412 6.9E-16 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 412 5.9E-111 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 PANTHER PTHR13812 1 427 2.8E-79 T 23-04-2016 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 PIRSF PIRSF000445 1 424 2.5E-120 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 175 300 1.1E-35 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase UPTC3659_RS04435 95d6c3d6a2c8e67a7f3918b733717a01 435 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 412 24.407 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS01450 d4e7eabbdcda6c62c914a3218ca9c2c7 181 PANTHER PTHR35091 2 181 2.5E-32 T 23-04-2016 UPTC3659_RS01450 d4e7eabbdcda6c62c914a3218ca9c2c7 181 Pfam PF03748 Flagellar basal body-associated protein FliL 86 180 1.2E-22 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS01450 d4e7eabbdcda6c62c914a3218ca9c2c7 181 PANTHER PTHR35091:SF2 2 181 2.5E-32 T 23-04-2016 UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 PRINTS PR00775 90kDa heat shock protein signature 20 42 1.9E-49 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 PRINTS PR00775 90kDa heat shock protein signature 179 197 1.9E-49 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 PRINTS PR00775 90kDa heat shock protein signature 114 136 1.9E-49 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 PRINTS PR00775 90kDa heat shock protein signature 69 86 1.9E-49 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 PRINTS PR00775 90kDa heat shock protein signature 87 104 1.9E-49 T 23-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 SUPERFAMILY SSF55874 1 203 1.38E-63 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 21 174 3.1E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 PANTHER PTHR11528:SF44 1 608 8.2E-248 T 23-04-2016 UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 604 28.917 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 SUPERFAMILY SSF54211 226 477 4.48E-83 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 PIRSF PIRSF002583 1 609 4.0E-192 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 SUPERFAMILY SSF110942 495 603 1.44E-28 T 23-04-2016 UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 PANTHER PTHR11528 1 608 8.2E-248 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 Gene3D G3DSA:3.30.565.10 1 234 4.4E-79 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 SMART SM00387 21 175 4.7E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 Pfam PF00183 Hsp90 protein 209 608 2.2E-99 T 23-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 UPTC3659_RS04055 20b8f7c9dca238efb75bdb1c798e9cdb 609 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 19 28 - T 23-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 SMART SM00954 263 372 2.0E-59 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 Pfam PF02824 TGS domain 416 473 7.2E-17 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 SUPERFAMILY SSF55021 643 718 2.86E-6 T 23-04-2016 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 44 715 1.7E-189 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 Gene3D G3DSA:3.30.460.10 203 351 9.9E-37 T 23-04-2016 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 Pfam PF13328 HD domain 43 200 8.9E-41 T 23-04-2016 IPR003607 HD/PDEase domain UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 PANTHER PTHR21262:SF0 36 724 1.8E-175 T 23-04-2016 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 SUPERFAMILY SSF81301 217 371 5.89E-51 T 23-04-2016 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 SUPERFAMILY SSF109604 36 215 1.73E-56 T 23-04-2016 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 Gene3D G3DSA:3.30.70.260 647 713 6.4E-6 T 23-04-2016 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 Pfam PF01842 ACT domain 650 712 2.0E-8 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 Pfam PF04607 Region found in RelA / SpoT proteins 263 372 3.7E-33 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 SMART SM00471 58 178 6.6E-8 T 23-04-2016 IPR003607 HD/PDEase domain UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 SUPERFAMILY SSF81271 405 475 1.8E-17 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 PANTHER PTHR21262 36 724 1.8E-175 T 23-04-2016 UPTC3659_RS03560 09f9f0a832a21f524dc82ac80da2d8c1 729 Gene3D G3DSA:3.10.20.30 416 477 5.5E-11 T 23-04-2016 IPR012675 Beta-grasp domain UPTC3659_RS00040 6fbbfb38d61f781a9be9d69951003a8f 222 PIRSF PIRSF009467 2 222 1.7E-39 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 UPTC3659_RS00040 6fbbfb38d61f781a9be9d69951003a8f 222 Pfam PF01730 UreF 36 179 1.6E-10 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 UPTC3659_RS00040 6fbbfb38d61f781a9be9d69951003a8f 222 PANTHER PTHR33620 4 222 7.7E-13 T 23-04-2016 UPTC3659_RS07685 f2c6a1605d8fb426aa394175b09ae6ac 233 Pfam PF02348 Cytidylyltransferase 5 223 4.2E-36 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 UPTC3659_RS07685 f2c6a1605d8fb426aa394175b09ae6ac 233 Gene3D G3DSA:3.90.550.10 1 225 2.4E-70 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07685 f2c6a1605d8fb426aa394175b09ae6ac 233 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 4 225 4.9E-100 T 23-04-2016 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 UPTC3659_RS07685 f2c6a1605d8fb426aa394175b09ae6ac 233 PANTHER PTHR21485 1 213 1.0E-39 T 23-04-2016 UPTC3659_RS07685 f2c6a1605d8fb426aa394175b09ae6ac 233 SUPERFAMILY SSF53448 1 224 3.15E-55 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS00595 6dd5665c4b4dc8192ef6896a7b7b27b3 193 SUPERFAMILY SSF52317 4 193 1.78E-49 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS00595 6dd5665c4b4dc8192ef6896a7b7b27b3 193 PANTHER PTHR21235:SF1 5 193 3.2E-68 T 23-04-2016 UPTC3659_RS00595 6dd5665c4b4dc8192ef6896a7b7b27b3 193 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 193 32.644 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 UPTC3659_RS00595 6dd5665c4b4dc8192ef6896a7b7b27b3 193 Pfam PF00117 Glutamine amidotransferase class-I 6 190 2.2E-19 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 UPTC3659_RS00595 6dd5665c4b4dc8192ef6896a7b7b27b3 193 PIRSF PIRSF000495 1 193 8.9E-63 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 UPTC3659_RS00595 6dd5665c4b4dc8192ef6896a7b7b27b3 193 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 193 2.7E-62 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 UPTC3659_RS00595 6dd5665c4b4dc8192ef6896a7b7b27b3 193 PANTHER PTHR21235 5 193 3.2E-68 T 23-04-2016 UPTC3659_RS00595 6dd5665c4b4dc8192ef6896a7b7b27b3 193 Gene3D G3DSA:3.40.50.880 1 193 4.2E-62 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS01245 ce37aaa15a355c669680fdd635d5c8dc 460 PANTHER PTHR11564 218 452 3.8E-67 T 23-04-2016 UPTC3659_RS01245 ce37aaa15a355c669680fdd635d5c8dc 460 SMART SM00382 258 415 1.6E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS01245 ce37aaa15a355c669680fdd635d5c8dc 460 SUPERFAMILY SSF52540 255 451 2.63E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01245 ce37aaa15a355c669680fdd635d5c8dc 460 Pfam PF00448 SRP54-type protein, GTPase domain 260 451 3.2E-41 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS01245 ce37aaa15a355c669680fdd635d5c8dc 460 PANTHER PTHR11564:SF3 218 452 3.8E-67 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 UPTC3659_RS01245 ce37aaa15a355c669680fdd635d5c8dc 460 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 5 347 2.8E-68 T 23-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 UPTC3659_RS01245 ce37aaa15a355c669680fdd635d5c8dc 460 Gene3D G3DSA:3.40.50.300 255 451 6.4E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01245 ce37aaa15a355c669680fdd635d5c8dc 460 SMART SM00962 259 452 1.6E-55 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 Gene3D G3DSA:3.40.120.10 171 248 6.8E-26 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 SUPERFAMILY SSF55957 360 453 7.32E-19 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 SUPERFAMILY SSF53738 257 357 1.14E-20 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 Gene3D G3DSA:3.40.120.10 3 126 8.7E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 Gene3D G3DSA:3.30.310.50 362 453 2.6E-23 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 366 441 1.8E-9 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 SUPERFAMILY SSF53738 152 252 2.79E-24 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 SUPERFAMILY SSF53738 3 176 4.32E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.1E-21 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 203 216 1.1E-21 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 1.1E-21 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 169 188 1.1E-21 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 251 1.1E-20 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 PANTHER PTHR22573 3 453 1.8E-118 T 23-04-2016 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 362 3.6E-17 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 Gene3D G3DSA:3.40.120.10 254 360 3.7E-28 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 117 2.0E-26 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS01375 332f1906567df165477ca6fbfbaaf97d 455 PANTHER PTHR22573:SF28 3 453 1.8E-118 T 23-04-2016 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 PRINTS PR00123 ATP synthase A subunit signature 139 154 9.3E-14 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 PRINTS PR00123 ATP synthase A subunit signature 79 95 9.3E-14 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 PRINTS PR00123 ATP synthase A subunit signature 159 181 9.3E-14 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 PRINTS PR00123 ATP synthase A subunit signature 203 218 9.3E-14 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 7 217 2.7E-41 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 PANTHER PTHR11410:SF7 25 226 3.8E-59 T 23-04-2016 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 Pfam PF00119 ATP synthase A chain 24 216 3.9E-49 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 223 14.381 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 Gene3D G3DSA:1.20.120.220 72 219 1.7E-40 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 PANTHER PTHR11410 25 226 3.8E-59 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 SUPERFAMILY SSF81336 73 216 1.31E-35 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 UPTC3659_RS07220 715b5b7c51f959e30fe70e5d7e1d0f5f 226 ProSitePatterns PS00449 ATP synthase a subunit signature. 162 171 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 Gene3D G3DSA:1.10.287.950 460 651 4.0E-44 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 SUPERFAMILY SSF103190 60 175 5.1E-11 T 23-04-2016 IPR029151 Periplasmic sensor domain-like UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 Gene3D G3DSA:3.30.450.20 78 179 2.6E-20 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 PANTHER PTHR32089:SF1 98 351 4.4E-51 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 PANTHER PTHR32089:SF1 27 81 4.4E-51 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 PANTHER PTHR32089:SF1 471 653 4.4E-51 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 PANTHER PTHR32089:SF1 405 429 4.4E-51 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 PANTHER PTHR32089 98 351 4.4E-51 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 PANTHER PTHR32089 27 81 4.4E-51 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 PANTHER PTHR32089 471 653 4.4E-51 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 PANTHER PTHR32089 405 429 4.4E-51 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 SUPERFAMILY SSF58104 460 657 1.44E-48 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 SUPERFAMILY SSF58104 341 371 1.44E-48 T 23-04-2016 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 Pfam PF02743 Cache domain 67 271 3.0E-21 T 23-04-2016 IPR033479 Double Cache domain 1 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 SMART SM00283 468 659 4.4E-26 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS08795 b5e17befda0d9724fe9a0da9284135b6 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 514 600 2.4E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 PIRSF PIRSF004486 1 304 1.7E-90 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 Gene3D G3DSA:1.10.150.170 109 210 3.9E-26 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 PANTHER PTHR11265:SF0 5 305 5.5E-92 T 23-04-2016 UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 SUPERFAMILY SSF81799 110 208 1.05E-22 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 Pfam PF01795 MraW methylase family 3 302 1.4E-90 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 Gene3D G3DSA:3.40.50.150 5 106 1.1E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 Gene3D G3DSA:3.40.50.150 211 302 1.1E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 302 1.4E-86 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 PANTHER PTHR11265 5 305 5.5E-92 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 305 30.068 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 SUPERFAMILY SSF53335 208 302 2.09E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07010 5f1198b74016879de1b9630269b282b7 305 SUPERFAMILY SSF53335 4 109 2.09E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00500 caa668e72d157e046d4a1fdf06d4bc45 164 Pfam PF03167 Uracil DNA glycosylase superfamily 11 146 2.2E-12 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS00500 caa668e72d157e046d4a1fdf06d4bc45 164 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 8 148 7.8E-34 T 23-04-2016 IPR026353 Hypoxanthine-DNA glycosylase UPTC3659_RS00500 caa668e72d157e046d4a1fdf06d4bc45 164 Gene3D G3DSA:3.40.470.10 7 155 1.9E-34 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS00500 caa668e72d157e046d4a1fdf06d4bc45 164 SUPERFAMILY SSF52141 7 156 4.8E-32 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 SUPERFAMILY SSF50800 71 170 2.44E-20 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 SUPERFAMILY SSF51621 170 343 8.03E-89 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 SUPERFAMILY SSF51621 2 76 8.03E-89 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 PANTHER PTHR11817:SF3 1 477 1.3E-187 T 23-04-2016 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 470 3.0E-26 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 SUPERFAMILY SSF52935 326 470 1.16E-31 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 Gene3D G3DSA:2.40.33.10 74 170 1.3E-22 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 Gene3D G3DSA:3.20.20.60 171 327 6.7E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 Gene3D G3DSA:3.20.20.60 3 73 6.7E-96 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 470 2.6E-147 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 PANTHER PTHR11817 1 477 1.3E-187 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 PRINTS PR01050 Pyruvate kinase family signature 315 331 6.1E-56 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 PRINTS PR01050 Pyruvate kinase family signature 189 203 6.1E-56 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 PRINTS PR01050 Pyruvate kinase family signature 271 295 6.1E-56 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 PRINTS PR01050 Pyruvate kinase family signature 296 314 6.1E-56 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 PRINTS PR01050 Pyruvate kinase family signature 60 76 6.1E-56 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 PRINTS PR01050 Pyruvate kinase family signature 246 270 6.1E-56 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 PRINTS PR01050 Pyruvate kinase family signature 219 245 6.1E-56 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 Gene3D G3DSA:3.40.1380.20 328 470 1.9E-33 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02550 e041917c807f7d34a12e5fc6a864e44b 483 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 8.8E-119 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 PANTHER PTHR11404 1 213 3.3E-88 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 193 1.5E-35 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 4.1E-16 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 PRINTS PR01703 Manganese superoxide dismutase signature 26 39 4.1E-16 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 PRINTS PR01703 Manganese superoxide dismutase signature 64 77 4.1E-16 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 PRINTS PR01703 Manganese superoxide dismutase signature 5 16 4.1E-16 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 4.1E-16 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 PANTHER PTHR11404:SF8 1 213 3.3E-88 T 23-04-2016 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 SUPERFAMILY SSF54719 87 200 1.22E-41 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 SUPERFAMILY SSF46609 1 82 2.88E-29 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 80 2.4E-25 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 PIRSF PIRSF000349 1 204 1.4E-72 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00340 bfae8ea0fc4bfedc979c85baedd7f27c 217 Gene3D G3DSA:1.10.287.990 19 80 1.2E-21 T 23-04-2016 UPTC3659_RS04035 736635f8bb364065a929204b8022350a 532 Pfam PF01434 Peptidase family M41 373 484 3.1E-7 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 UPTC3659_RS04035 736635f8bb364065a929204b8022350a 532 SUPERFAMILY SSF52540 140 380 2.37E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04035 736635f8bb364065a929204b8022350a 532 PANTHER PTHR23076 35 472 6.0E-141 T 23-04-2016 UPTC3659_RS04035 736635f8bb364065a929204b8022350a 532 SMART SM00382 178 314 3.8E-21 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS04035 736635f8bb364065a929204b8022350a 532 SUPERFAMILY SSF140990 391 530 2.88E-23 T 23-04-2016 UPTC3659_RS04035 736635f8bb364065a929204b8022350a 532 ProSitePatterns PS00674 AAA-protein family signature. 282 300 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 UPTC3659_RS04035 736635f8bb364065a929204b8022350a 532 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 182 311 6.0E-43 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS04035 736635f8bb364065a929204b8022350a 532 Gene3D G3DSA:3.40.50.300 141 320 2.5E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04035 736635f8bb364065a929204b8022350a 532 Gene3D G3DSA:1.10.8.60 321 384 9.0E-16 T 23-04-2016 UPTC3659_RS06245 aea44d1f221b12be6fb83a852f09ec66 71 Pfam PF04325 Protein of unknown function (DUF465) 19 65 1.0E-15 T 23-04-2016 IPR007420 Protein of unknown function DUF465 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 PIRSF PIRSF002811 1 588 5.2E-137 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 Gene3D G3DSA:3.90.580.10 1 96 5.5E-36 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 Pfam PF13155 Toprim-like 250 334 1.9E-19 T 23-04-2016 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 PANTHER PTHR30313 1 410 3.9E-108 T 23-04-2016 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 Gene3D G3DSA:3.90.980.10 107 228 1.4E-32 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 Hamap MF_00974 DNA primase [dnaG]. 1 548 25.642 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 Pfam PF08275 DNA primase catalytic core, N-terminal domain 117 239 8.5E-35 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 SUPERFAMILY SSF57783 1 96 3.57E-33 T 23-04-2016 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 SMART SM00400 33 87 1.1E-31 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 TIGRFAM TIGR01391 dnaG: DNA primase 1 402 1.8E-134 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 Pfam PF01807 CHC2 zinc finger 3 97 3.8E-35 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 SMART SM00493 247 318 1.4E-17 T 23-04-2016 IPR006171 Toprim domain UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 Gene3D G3DSA:3.40.1360.10 229 348 4.6E-38 T 23-04-2016 UPTC3659_RS08545 6b9d2a5b6901a5a202340894faa30ddf 595 SUPERFAMILY SSF56731 107 406 1.28E-83 T 23-04-2016 UPTC3659_RS01320 312592dd6fcd915c1701b03ee2a61510 367 Pfam PF01883 Domain of unknown function DUF59 2 65 1.1E-8 T 23-04-2016 IPR002744 Domain of unknown function DUF59 UPTC3659_RS01320 312592dd6fcd915c1701b03ee2a61510 367 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 1.8E-92 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein UPTC3659_RS01320 312592dd6fcd915c1701b03ee2a61510 367 SUPERFAMILY SSF52540 98 355 1.2E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01320 312592dd6fcd915c1701b03ee2a61510 367 SUPERFAMILY SSF117916 2 73 1.24E-11 T 23-04-2016 UPTC3659_RS01320 312592dd6fcd915c1701b03ee2a61510 367 Gene3D G3DSA:3.40.50.300 90 337 2.8E-91 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01320 312592dd6fcd915c1701b03ee2a61510 367 PANTHER PTHR23264 1 347 4.5E-128 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein UPTC3659_RS01320 312592dd6fcd915c1701b03ee2a61510 367 PANTHER PTHR23264:SF19 1 347 4.5E-128 T 23-04-2016 UPTC3659_RS01320 312592dd6fcd915c1701b03ee2a61510 367 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 35.104 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein UPTC3659_RS01320 312592dd6fcd915c1701b03ee2a61510 367 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 UPTC3659_RS01425 6e5c48b1e707c364e9af5d06065d1c3d 399 PANTHER PTHR23135:SF2 53 398 2.0E-63 T 23-04-2016 UPTC3659_RS01425 6e5c48b1e707c364e9af5d06065d1c3d 399 Pfam PF08245 Mur ligase middle domain 91 204 1.9E-17 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS01425 6e5c48b1e707c364e9af5d06065d1c3d 399 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 2 396 1.6E-99 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS01425 6e5c48b1e707c364e9af5d06065d1c3d 399 SUPERFAMILY SSF53244 261 398 8.24E-37 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS01425 6e5c48b1e707c364e9af5d06065d1c3d 399 SUPERFAMILY SSF53623 87 202 1.07E-26 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS01425 6e5c48b1e707c364e9af5d06065d1c3d 399 Gene3D G3DSA:3.40.1190.10 86 195 8.8E-31 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS01425 6e5c48b1e707c364e9af5d06065d1c3d 399 Gene3D G3DSA:3.90.190.20 260 394 7.4E-42 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS01425 6e5c48b1e707c364e9af5d06065d1c3d 399 PANTHER PTHR23135 53 398 2.0E-63 T 23-04-2016 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 Hamap MF_00050 Elongation factor Ts [tsf]. 1 357 62.54 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 Gene3D G3DSA:1.10.286.20 249 290 5.9E-6 T 23-04-2016 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 Gene3D G3DSA:3.30.479.20 154 197 2.1E-26 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 Gene3D G3DSA:3.30.479.20 297 339 2.1E-26 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 224 3.8E-73 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 242 357 7.3E-31 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 SUPERFAMILY SSF46934 4 55 2.26E-18 T 23-04-2016 IPR009060 UBA-like GO:0005515 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 SUPERFAMILY SSF54713 242 357 2.94E-26 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 PANTHER PTHR11741 263 358 3.4E-107 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 PANTHER PTHR11741 1 217 3.4E-107 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 SUPERFAMILY SSF54713 56 146 9.94E-18 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 Gene3D G3DSA:3.30.479.20 57 149 6.1E-17 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 Gene3D G3DSA:1.10.8.10 2 55 1.2E-26 T 23-04-2016 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 Pfam PF00889 Elongation factor TS 73 236 7.4E-50 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 Pfam PF00889 Elongation factor TS 242 340 6.3E-24 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 SUPERFAMILY SSF54713 152 228 2.4E-15 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS06570 96b2e8d1c8a6b5000344ae4513597dd7 358 ProSitePatterns PS01127 Elongation factor Ts signature 2. 77 87 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 UPTC3659_RS08270 cd37047f292a39c2f1ee3dc868c71fcf 210 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 37 160 2.5E-39 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 UPTC3659_RS08270 cd37047f292a39c2f1ee3dc868c71fcf 210 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 28 166 23.293 T 23-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 UPTC3659_RS08270 cd37047f292a39c2f1ee3dc868c71fcf 210 Pfam PF12838 4Fe-4S dicluster domain 83 135 8.3E-10 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS08270 cd37047f292a39c2f1ee3dc868c71fcf 210 PANTHER PTHR10849 1 161 9.7E-38 T 23-04-2016 UPTC3659_RS08270 cd37047f292a39c2f1ee3dc868c71fcf 210 SUPERFAMILY SSF54862 56 152 1.3E-19 T 23-04-2016 UPTC3659_RS08270 cd37047f292a39c2f1ee3dc868c71fcf 210 Gene3D G3DSA:3.30.70.20 45 139 1.5E-14 T 23-04-2016 UPTC3659_RS08270 cd37047f292a39c2f1ee3dc868c71fcf 210 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 123 134 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 SUPERFAMILY SSF116726 290 351 4.97E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 Pfam PF02080 TrkA-C domain 291 347 1.5E-9 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 Pfam PF02080 TrkA-C domain 209 274 7.0E-7 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 PANTHER PTHR10283:SF79 272 377 1.2E-57 T 23-04-2016 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 PANTHER PTHR10283:SF79 427 571 1.2E-57 T 23-04-2016 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 PANTHER PTHR10283:SF79 3 198 1.2E-57 T 23-04-2016 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 PANTHER PTHR10283:SF79 236 241 1.2E-57 T 23-04-2016 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 Gene3D G3DSA:3.30.70.1450 202 279 3.7E-13 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 SUPERFAMILY SSF116726 202 278 4.32E-14 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 Gene3D G3DSA:3.30.70.1450 289 346 1.3E-12 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 Pfam PF03600 Citrate transporter 15 516 1.8E-26 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 PANTHER PTHR10283 272 377 1.2E-57 T 23-04-2016 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 PANTHER PTHR10283 427 571 1.2E-57 T 23-04-2016 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 PANTHER PTHR10283 3 198 1.2E-57 T 23-04-2016 UPTC3659_RS01650 335d93ab40ab910a8e22f6df030b4fda 571 PANTHER PTHR10283 236 241 1.2E-57 T 23-04-2016 UPTC3659_RS03925 e8aa47fd7ec57c2ebc09469c74161c5e 179 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 1.0E-70 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 UPTC3659_RS03925 e8aa47fd7ec57c2ebc09469c74161c5e 179 PANTHER PTHR32315 1 178 1.1E-72 T 23-04-2016 UPTC3659_RS03925 e8aa47fd7ec57c2ebc09469c74161c5e 179 Gene3D G3DSA:3.40.50.2020 5 178 2.0E-63 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS03925 e8aa47fd7ec57c2ebc09469c74161c5e 179 SUPERFAMILY SSF53271 13 169 3.93E-46 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS03925 e8aa47fd7ec57c2ebc09469c74161c5e 179 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 10 179 34.428 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 UPTC3659_RS03925 e8aa47fd7ec57c2ebc09469c74161c5e 179 Pfam PF00156 Phosphoribosyl transferase domain 31 165 1.2E-16 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 UPTC3659_RS01630 eef0b751dac5d1e9de38fb4bafd15b28 201 PANTHER PTHR30390 4 193 2.4E-81 T 23-04-2016 UPTC3659_RS01630 eef0b751dac5d1e9de38fb4bafd15b28 201 SUPERFAMILY SSF53697 7 193 6.47E-52 T 23-04-2016 UPTC3659_RS01630 eef0b751dac5d1e9de38fb4bafd15b28 201 PANTHER PTHR30390:SF6 4 193 2.4E-81 T 23-04-2016 UPTC3659_RS01630 eef0b751dac5d1e9de38fb4bafd15b28 201 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 3 192 38.036 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 UPTC3659_RS01630 eef0b751dac5d1e9de38fb4bafd15b28 201 Pfam PF13580 SIS domain 31 149 2.0E-24 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 UPTC3659_RS01630 eef0b751dac5d1e9de38fb4bafd15b28 201 Gene3D G3DSA:3.40.50.10490 7 194 2.6E-61 T 23-04-2016 UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 291 28.721 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 SUPERFAMILY SSF51735 1 148 4.74E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 PIRSF PIRSF000114 28 299 3.8E-71 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 PANTHER PTHR11728 1 296 2.1E-73 T 23-04-2016 UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 158 179 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 Gene3D G3DSA:3.40.50.720 43 153 2.4E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 Gene3D G3DSA:3.40.50.720 1 42 2.3E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 150 285 2.3E-44 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 Gene3D G3DSA:1.10.1040.10 154 294 4.2E-47 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 PANTHER PTHR11728:SF1 1 296 2.1E-73 T 23-04-2016 UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 SUPERFAMILY SSF48179 149 295 9.52E-47 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 UPTC3659_RS07210 fab4138d79eab7b9eb9fd97e6e717b71 300 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 42 131 7.3E-15 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 SMART SM00382 88 242 2.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 PANTHER PTHR32472 1 422 2.9E-167 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 442 7.2E-174 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 SUPERFAMILY SSF54211 300 446 2.09E-30 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 SUPERFAMILY SSF54211 253 267 2.09E-30 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 423 2.4E-9 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 Pfam PF13481 AAA domain 69 220 2.3E-13 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 SUPERFAMILY SSF52540 66 285 2.55E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 PRINTS PR01874 DNA repair protein radA signature 317 340 1.2E-85 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 PRINTS PR01874 DNA repair protein radA signature 122 139 1.2E-85 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 PRINTS PR01874 DNA repair protein radA signature 80 108 1.2E-85 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 PRINTS PR01874 DNA repair protein radA signature 211 239 1.2E-85 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 PRINTS PR01874 DNA repair protein radA signature 10 34 1.2E-85 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 PRINTS PR01874 DNA repair protein radA signature 246 272 1.2E-85 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 PRINTS PR01874 DNA repair protein radA signature 172 196 1.2E-85 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 PANTHER PTHR32472:SF10 1 422 2.9E-167 T 23-04-2016 UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 Gene3D G3DSA:3.30.230.10 287 446 1.5E-28 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS07230 56571c746d8d954ccdcf8ff6e687f596 446 Gene3D G3DSA:3.40.50.300 65 273 9.6E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06470 b57ffa6330deca393f25941642057195 297 SUPERFAMILY SSF56524 52 293 1.12E-82 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 UPTC3659_RS06470 b57ffa6330deca393f25941642057195 297 PANTHER PTHR19372 42 292 5.3E-120 T 23-04-2016 UPTC3659_RS06470 b57ffa6330deca393f25941642057195 297 Pfam PF00174 Oxidoreductase molybdopterin binding domain 78 235 4.9E-32 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 UPTC3659_RS06470 b57ffa6330deca393f25941642057195 297 Gene3D G3DSA:3.90.420.10 46 296 2.0E-67 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 UPTC3659_RS06470 b57ffa6330deca393f25941642057195 297 PANTHER PTHR19372:SF1 42 292 5.3E-120 T 23-04-2016 UPTC3659_RS02530 32611f55382469d2997641374096130b 171 PANTHER PTHR23133 1 169 3.2E-46 T 23-04-2016 UPTC3659_RS02530 32611f55382469d2997641374096130b 171 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 140 2.2E-32 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA UPTC3659_RS02530 32611f55382469d2997641374096130b 171 PIRSF PIRSF004682 1 169 2.6E-54 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 UPTC3659_RS02530 32611f55382469d2997641374096130b 171 SUPERFAMILY SSF56784 1 169 7.2E-43 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS02530 32611f55382469d2997641374096130b 171 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 145 2.6E-36 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 UPTC3659_RS02530 32611f55382469d2997641374096130b 171 PANTHER PTHR23133:SF3 1 169 3.2E-46 T 23-04-2016 UPTC3659_RS02530 32611f55382469d2997641374096130b 171 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 149 1.4E-51 T 23-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 UPTC3659_RS02530 32611f55382469d2997641374096130b 171 Pfam PF13242 HAD-hyrolase-like 98 152 8.5E-11 T 23-04-2016 UPTC3659_RS02530 32611f55382469d2997641374096130b 171 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 94 137 5.9E-6 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 UPTC3659_RS02530 32611f55382469d2997641374096130b 171 Gene3D G3DSA:3.40.50.1000 1 167 3.4E-52 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 SUPERFAMILY SSF51412 2 89 6.67E-123 T 23-04-2016 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 SUPERFAMILY SSF51412 215 472 6.67E-123 T 23-04-2016 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 Pfam PF00571 CBS domain 148 200 6.4E-9 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 Pfam PF00571 CBS domain 93 139 7.4E-12 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 SMART SM00116 156 204 4.8E-6 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 SMART SM00116 95 143 6.6E-8 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 SUPERFAMILY SSF54631 63 201 5.56E-32 T 23-04-2016 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 450 1.7E-187 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 468 1.2E-160 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 PANTHER PTHR11911 1 277 2.9E-229 T 23-04-2016 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 PANTHER PTHR11911 295 480 2.9E-229 T 23-04-2016 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 PANTHER PTHR11911:SF6 1 277 2.9E-229 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 PANTHER PTHR11911:SF6 295 480 2.9E-229 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 481 83.296 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 SMART SM01240 6 468 0.0 T 23-04-2016 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 PIRSF PIRSF000130 1 483 9.6E-206 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 290 302 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 UPTC3659_RS06910 c6ecfadc83eba919433459be69118ddb 483 Gene3D G3DSA:3.20.20.70 3 480 2.3E-196 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS06230 fc2b17bfe0c10566267fa3abcb72ecd9 215 PANTHER PTHR11749:SF3 1 212 1.4E-99 T 23-04-2016 UPTC3659_RS06230 fc2b17bfe0c10566267fa3abcb72ecd9 215 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 212 3.7E-91 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 UPTC3659_RS06230 fc2b17bfe0c10566267fa3abcb72ecd9 215 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 UPTC3659_RS06230 fc2b17bfe0c10566267fa3abcb72ecd9 215 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 UPTC3659_RS06230 fc2b17bfe0c10566267fa3abcb72ecd9 215 SUPERFAMILY SSF51366 2 212 3.25E-68 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 UPTC3659_RS06230 fc2b17bfe0c10566267fa3abcb72ecd9 215 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 7.5E-79 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 UPTC3659_RS06230 fc2b17bfe0c10566267fa3abcb72ecd9 215 PIRSF PIRSF001461 1 215 2.4E-88 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 UPTC3659_RS06230 fc2b17bfe0c10566267fa3abcb72ecd9 215 PANTHER PTHR11749 1 212 1.4E-99 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 UPTC3659_RS06230 fc2b17bfe0c10566267fa3abcb72ecd9 215 Gene3D G3DSA:3.20.20.70 2 212 1.3E-83 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 PANTHER PTHR11451:SF31 1 600 5.1E-258 T 23-04-2016 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 SUPERFAMILY SSF52954 493 600 1.43E-28 T 23-04-2016 IPR004154 Anticodon-binding UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 SUPERFAMILY SSF55186 34 207 2.22E-58 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 Gene3D G3DSA:3.40.50.800 498 601 1.5E-31 T 23-04-2016 IPR004154 Anticodon-binding UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 SUPERFAMILY SSF55681 209 492 5.35E-90 T 23-04-2016 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 36 600 32.975 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 290 494 4.5E-40 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 500 512 5.0E-51 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 296 324 5.0E-51 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 430 458 5.0E-51 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 352 5.0E-51 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 PRINTS PR01047 Threonyl-tRNA synthetase signature 473 486 5.0E-51 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 SMART SM00863 136 185 3.3E-22 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 Gene3D G3DSA:3.30.54.20 101 153 2.6E-14 T 23-04-2016 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 Gene3D G3DSA:3.30.980.10 36 99 4.1E-38 T 23-04-2016 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 Gene3D G3DSA:3.30.980.10 154 190 4.1E-38 T 23-04-2016 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 136 185 3.5E-14 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 Gene3D G3DSA:3.30.930.10 208 495 2.2E-113 T 23-04-2016 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 Pfam PF03129 Anticodon binding domain 507 596 4.0E-24 T 23-04-2016 IPR004154 Anticodon-binding UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 42 595 3.1E-218 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UPTC3659_RS00165 15a2e949bd3d7667e3a536d53a509237 603 PANTHER PTHR11451 1 600 5.1E-258 T 23-04-2016 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 Gene3D G3DSA:3.10.290.10 102 199 5.7E-31 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 PANTHER PTHR11831:SF4 1 208 1.1E-77 T 23-04-2016 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 SMART SM01390 3 97 1.9E-45 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 1.4E-26 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 35.938 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 PANTHER PTHR11831 1 208 1.1E-77 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 Gene3D G3DSA:1.10.1050.10 1 101 5.2E-42 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 23-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 SMART SM00363 98 162 3.3E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 SUPERFAMILY SSF55174 3 208 7.98E-69 T 23-04-2016 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 Pfam PF01479 S4 domain 98 145 3.2E-21 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS00565 81c9debddb1a6a67c0ec302511282252 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 3.0E-82 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Pfam PF01751 Toprim domain 5 114 4.9E-29 T 23-04-2016 IPR006171 Toprim domain UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Gene3D G3DSA:2.70.20.10 185 313 2.7E-28 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Gene3D G3DSA:2.70.20.10 318 451 8.9E-32 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 664 689 0.0085 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 570 607 3.1E-15 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 623 661 4.5E-13 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 PANTHER PTHR11390:SF27 1 690 2.3E-289 T 23-04-2016 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Gene3D G3DSA:3.30.65.10 613 660 4.5E-7 T 23-04-2016 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Gene3D G3DSA:3.30.65.10 570 610 1.1E-13 T 23-04-2016 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 SUPERFAMILY SSF57783 568 610 5.5E-12 T 23-04-2016 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 SMART SM00436 105 193 2.0E-48 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Gene3D G3DSA:3.40.50.140 2 135 3.8E-45 T 23-04-2016 IPR006171 Toprim domain UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 605 6.2E-244 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Gene3D G3DSA:1.10.460.10 452 556 4.6E-56 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Gene3D G3DSA:1.10.460.10 136 183 4.6E-56 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 280 302 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Pfam PF01131 DNA topoisomerase 129 542 3.2E-128 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 SUPERFAMILY SSF56712 2 582 1.7E-184 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 SMART SM00493 3 104 3.8E-29 T 23-04-2016 IPR006171 Toprim domain UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 6.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 468 482 6.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 78 91 6.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 371 387 6.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 163 181 6.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 PANTHER PTHR11390 1 690 2.3E-289 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 SMART SM00437 243 505 1.8E-108 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 640 54.642 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 UPTC3659_RS00890 57766f1431d82912d9013e1b8ec6e8e8 695 SUPERFAMILY SSF57783 617 660 2.93E-7 T 23-04-2016 UPTC3659_RS07860 68c26480f774851be36087d49003750b 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 360 4.4E-107 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 UPTC3659_RS07860 68c26480f774851be36087d49003750b 363 Pfam PF00155 Aminotransferase class I and II 30 355 8.4E-43 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UPTC3659_RS07860 68c26480f774851be36087d49003750b 363 SUPERFAMILY SSF53383 3 357 2.13E-63 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS07860 68c26480f774851be36087d49003750b 363 PANTHER PTHR11751 6 363 6.7E-74 T 23-04-2016 UPTC3659_RS07860 68c26480f774851be36087d49003750b 363 Gene3D G3DSA:3.40.640.10 44 266 8.2E-53 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS07860 68c26480f774851be36087d49003750b 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 363 51.423 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 UPTC3659_RS07860 68c26480f774851be36087d49003750b 363 Gene3D G3DSA:3.90.1150.10 267 361 3.7E-16 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS07860 68c26480f774851be36087d49003750b 363 PANTHER PTHR11751:SF414 6 363 6.7E-74 T 23-04-2016 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 Gene3D G3DSA:3.30.450.20 154 254 6.8E-20 T 23-04-2016 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 Gene3D G3DSA:3.30.450.20 34 136 1.7E-18 T 23-04-2016 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 289 430 5.9E-40 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 141 156 3.2E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 325 352 3.2E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 354 383 3.2E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 SUPERFAMILY SSF58104 233 429 4.05E-56 T 23-04-2016 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 Gene3D G3DSA:1.10.287.950 255 430 7.4E-50 T 23-04-2016 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 PANTHER PTHR24422 5 430 8.8E-137 T 23-04-2016 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 SUPERFAMILY SSF55785 152 256 2.79E-22 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 Pfam PF13426 PAS domain 36 136 1.7E-11 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 Pfam PF13426 PAS domain 156 258 1.7E-11 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 SUPERFAMILY SSF55785 33 134 5.76E-21 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 155 260 1.6E-11 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 138 4.1E-12 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 SMART SM00283 231 431 1.9E-18 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 SMART SM00091 20 90 0.092 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 SMART SM00091 142 212 6.1 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 SMART SM00086 217 259 0.014 T 23-04-2016 IPR001610 PAC motif UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 SMART SM00086 95 137 0.1 T 23-04-2016 IPR001610 PAC motif UPTC3659_RS07200 ffd7f2eb9a3f2f8d89b6bce29bc18e71 431 PANTHER PTHR24422:SF12 5 430 8.8E-137 T 23-04-2016 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 649 9.3E-227 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 SUPERFAMILY SSF47323 660 914 2.18E-45 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 Gene3D G3DSA:3.40.50.620 13 201 8.9E-131 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 Gene3D G3DSA:3.40.50.620 405 644 8.9E-131 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 PANTHER PTHR11946 5 254 0.0 T 23-04-2016 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 PANTHER PTHR11946 274 914 0.0 T 23-04-2016 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 533 546 3.2E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 233 256 3.2E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 400 415 3.2E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 569 578 3.2E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 3.2E-32 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 Gene3D G3DSA:1.10.730.10 650 781 1.1E-28 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 SUPERFAMILY SSF52374 402 656 6.12E-130 T 23-04-2016 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 SUPERFAMILY SSF52374 1 203 6.12E-130 T 23-04-2016 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 18.991 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 840 1.2E-265 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 SUPERFAMILY SSF50677 208 393 7.43E-46 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 Gene3D G3DSA:3.90.740.10 207 390 3.4E-53 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 PANTHER PTHR11946:SF11 5 254 0.0 T 23-04-2016 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 PANTHER PTHR11946:SF11 274 914 0.0 T 23-04-2016 UPTC3659_RS06920 49b0c99d9fba567f9a6b4c3e9970c61e 920 Pfam PF08264 Anticodon-binding domain of tRNA 689 840 6.2E-15 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 Pfam PF00288 GHMP kinases N terminal domain 100 167 3.3E-15 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 Gene3D G3DSA:3.30.70.890 191 319 2.4E-14 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 SUPERFAMILY SSF55060 187 322 3.42E-23 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 Gene3D G3DSA:3.30.230.10 3 176 1.5E-30 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 SUPERFAMILY SSF54211 2 186 1.21E-37 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 Pfam PF08544 GHMP kinases C terminal 239 307 3.4E-8 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 PRINTS PR00960 LmbP protein signature 147 166 2.5E-37 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 PRINTS PR00960 LmbP protein signature 282 301 2.5E-37 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 PRINTS PR00960 LmbP protein signature 254 278 2.5E-37 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 PRINTS PR00960 LmbP protein signature 105 126 2.5E-37 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 PRINTS PR00960 LmbP protein signature 7 22 2.5E-37 T 23-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 PANTHER PTHR32463 1 322 1.3E-71 T 23-04-2016 UPTC3659_RS01625 159a9846463015944077b3dbc4c0c011 338 PIRSF PIRSF036406 1 338 8.0E-136 T 23-04-2016 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 UPTC3659_RS00135 89bc6f95d8943f30de106dac73a029e3 339 PANTHER PTHR11228 17 181 1.0E-11 T 23-04-2016 UPTC3659_RS00135 89bc6f95d8943f30de106dac73a029e3 339 Gene3D G3DSA:3.20.20.70 67 181 8.0E-18 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS00135 89bc6f95d8943f30de106dac73a029e3 339 SUPERFAMILY SSF102114 68 181 5.23E-19 T 23-04-2016 UPTC3659_RS00135 89bc6f95d8943f30de106dac73a029e3 339 Pfam PF13394 4Fe-4S single cluster domain 74 170 2.2E-7 T 23-04-2016 UPTC3659_RS05925 cc63c21e3bff284fd0065f0979709969 390 PANTHER PTHR23501 1 389 4.7E-66 T 23-04-2016 UPTC3659_RS05925 cc63c21e3bff284fd0065f0979709969 390 SUPERFAMILY SSF103473 11 387 1.57E-51 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS05925 cc63c21e3bff284fd0065f0979709969 390 Pfam PF07690 Major Facilitator Superfamily 20 239 7.2E-20 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS05925 cc63c21e3bff284fd0065f0979709969 390 Gene3D G3DSA:1.20.1250.20 210 384 6.5E-23 T 23-04-2016 UPTC3659_RS05925 cc63c21e3bff284fd0065f0979709969 390 Gene3D G3DSA:1.20.1250.20 13 195 4.7E-23 T 23-04-2016 UPTC3659_RS05925 cc63c21e3bff284fd0065f0979709969 390 PANTHER PTHR23501:SF29 1 389 4.7E-66 T 23-04-2016 UPTC3659_RS08500 f921138541ff159a7019c9f5ed43e2e2 389 Pfam PF06965 Na+/H+ antiporter 1 6 378 6.4E-143 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 UPTC3659_RS08500 f921138541ff159a7019c9f5ed43e2e2 389 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 378 3.2E-139 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 UPTC3659_RS08500 f921138541ff159a7019c9f5ed43e2e2 389 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 386 22.567 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 UPTC3659_RS08500 f921138541ff159a7019c9f5ed43e2e2 389 PANTHER PTHR30341 1 381 3.8E-156 T 23-04-2016 UPTC3659_RS08500 f921138541ff159a7019c9f5ed43e2e2 389 PANTHER PTHR30341:SF0 1 381 3.8E-156 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 UPTC3659_RS08500 f921138541ff159a7019c9f5ed43e2e2 389 Gene3D G3DSA:1.20.1530.10 2 381 4.5E-149 T 23-04-2016 IPR023171 Na/H antiporter domain UPTC3659_RS06995 ef8165e6910c8d6ed6908ba61f29957a 325 Pfam PF05686 Glycosyl transferase family 90 138 299 4.8E-12 T 23-04-2016 IPR006598 Lipopolysaccharide-modifying protein UPTC3659_RS06995 ef8165e6910c8d6ed6908ba61f29957a 325 PANTHER PTHR12203 143 304 9.9E-18 T 23-04-2016 UPTC3659_RS06995 ef8165e6910c8d6ed6908ba61f29957a 325 SMART SM00672 89 308 0.0058 T 23-04-2016 IPR006598 Lipopolysaccharide-modifying protein UPTC3659_RS00155 187e43c686b7e55fd172bf1b17f053ea 661 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 4 620 1.2E-109 T 23-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 UPTC3659_RS00155 187e43c686b7e55fd172bf1b17f053ea 661 Pfam PF03169 OPT oligopeptide transporter protein 9 616 3.1E-102 T 23-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 UPTC3659_RS00155 187e43c686b7e55fd172bf1b17f053ea 661 PANTHER PTHR31645:SF0 6 621 8.3E-133 T 23-04-2016 UPTC3659_RS00155 187e43c686b7e55fd172bf1b17f053ea 661 PANTHER PTHR31645 6 621 8.3E-133 T 23-04-2016 UPTC3659_RS00155 187e43c686b7e55fd172bf1b17f053ea 661 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 9 616 1.1E-200 T 23-04-2016 IPR004814 Oligopeptide transporter OPT UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SUPERFAMILY SSF50341 485 617 3.4E-33 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SUPERFAMILY SSF52172 644 766 2.13E-34 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Gene3D G3DSA:2.40.50.180 510 572 2.4E-16 T 23-04-2016 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Pfam PF01627 Hpt domain 6 95 8.3E-16 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SMART SM00448 646 761 1.4E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Gene3D G3DSA:1.20.120.160 2 145 1.3E-43 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SUPERFAMILY SSF47384 231 299 7.06E-13 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SMART SM01231 230 298 6.6E-19 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Gene3D G3DSA:1.10.287.560 231 299 4.1E-19 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 PANTHER PTHR22617:SF6 1 633 3.4E-216 T 23-04-2016 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SUPERFAMILY SSF55874 301 484 1.02E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 231 298 6.7E-17 T 23-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Pfam PF00072 Response regulator receiver domain 648 761 1.6E-24 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SUPERFAMILY SSF47226 4 130 3.27E-31 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SMART SM00260 478 617 3.8E-44 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 PANTHER PTHR22617 1 633 3.4E-216 T 23-04-2016 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 3.6E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 3.6E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 440 3.6E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 3.6E-13 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SMART SM00073 4 101 2.0E-28 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 SMART SM00387 343 486 2.6E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 485 4.5E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Gene3D G3DSA:3.40.50.2300 644 765 4.1E-36 T 23-04-2016 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Pfam PF01584 CheW-like domain 491 618 6.9E-24 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Gene3D G3DSA:3.30.565.10 301 485 2.0E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Gene3D G3DSA:2.30.30.40 486 507 3.3E-24 T 23-04-2016 UPTC3659_RS07920 edaf4c24b42774b626456bd1cee52895 768 Gene3D G3DSA:2.30.30.40 573 616 3.3E-24 T 23-04-2016 UPTC3659_RS04560 d2292df2e6b2d7d3644fdf44f1346ae6 221 PANTHER PTHR30399 8 213 9.0E-27 T 23-04-2016 UPTC3659_RS04560 d2292df2e6b2d7d3644fdf44f1346ae6 221 Pfam PF01863 Protein of unknown function DUF45 27 217 1.1E-43 T 23-04-2016 IPR002725 Protein of unknown function DUF45 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 PANTHER PTHR10029 6 725 1.4E-246 T 23-04-2016 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 PIRSF PIRSF006256 1 732 5.0E-244 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 PANTHER PTHR10029:SF4 6 725 1.4E-246 T 23-04-2016 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 Pfam PF01300 Telomere recombination 211 381 5.1E-47 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 Pfam PF07503 HypF finger 108 141 2.1E-13 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 Pfam PF07503 HypF finger 158 185 1.6E-12 T 23-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 726 2.2E-202 T 23-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 23-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 SUPERFAMILY SSF55821 175 387 8.85E-43 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 Gene3D G3DSA:3.30.70.100 4 90 1.2E-22 T 23-04-2016 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 SUPERFAMILY SSF54975 3 90 6.32E-21 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 Pfam PF00708 Acylphosphatase 6 90 3.0E-20 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 UPTC3659_RS04545 4ccd40bf9d64a904c30ff5246735e0ed 732 Gene3D G3DSA:3.90.870.10 201 376 2.4E-44 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain UPTC3659_RS03880 6dab464671fab1972f3a376e40ee8fe1 234 Pfam PF13649 Methyltransferase domain 56 150 2.1E-11 T 23-04-2016 UPTC3659_RS03880 6dab464671fab1972f3a376e40ee8fe1 234 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 2 234 3.5E-68 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 UPTC3659_RS03880 6dab464671fab1972f3a376e40ee8fe1 234 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 1 234 36.212 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 UPTC3659_RS03880 6dab464671fab1972f3a376e40ee8fe1 234 PANTHER PTHR10108 1 227 1.4E-29 T 23-04-2016 UPTC3659_RS03880 6dab464671fab1972f3a376e40ee8fe1 234 SUPERFAMILY SSF53335 15 234 2.23E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03880 6dab464671fab1972f3a376e40ee8fe1 234 PIRSF PIRSF006325 1 234 3.8E-84 T 23-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 UPTC3659_RS03880 6dab464671fab1972f3a376e40ee8fe1 234 PANTHER PTHR10108:SF809 1 227 1.4E-29 T 23-04-2016 UPTC3659_RS03880 6dab464671fab1972f3a376e40ee8fe1 234 Gene3D G3DSA:3.40.50.150 15 234 2.7E-49 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 PANTHER PTHR10986 2 117 1.5E-60 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 Gene3D G3DSA:1.10.1900.20 55 117 5.7E-31 T 23-04-2016 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 72 2.0E-12 T 23-04-2016 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.67 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.5E-49 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 PANTHER PTHR10986:SF12 2 117 1.5E-60 T 23-04-2016 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 Pfam PF00453 Ribosomal protein L20 3 109 1.8E-46 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.5E-40 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.5E-40 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.5E-40 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00250 5b67a023c964e486c1f1f5f42716bf70 117 SUPERFAMILY SSF74731 3 117 5.1E-47 T 23-04-2016 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 Gene3D G3DSA:3.40.50.40 219 330 1.6E-34 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 PIRSF PIRSF500176 4 331 2.7E-83 T 23-04-2016 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 SUPERFAMILY SSF53774 4 329 1.44E-103 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 SMART SM00870 7 325 5.6E-142 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 88 98 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 PANTHER PTHR11707:SF29 6 330 2.5E-106 T 23-04-2016 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 5 331 5.2E-132 T 23-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 10 18 - T 23-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 Gene3D G3DSA:3.40.50.1170 4 215 2.4E-72 T 23-04-2016 IPR027474 L-asparaginase, N-terminal UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 PRINTS PR00139 Asparaginase/glutaminase family signature 267 285 7.7E-21 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 PRINTS PR00139 Asparaginase/glutaminase family signature 87 105 7.7E-21 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 PRINTS PR00139 Asparaginase/glutaminase family signature 8 19 7.7E-21 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 PANTHER PTHR11707 6 330 2.5E-106 T 23-04-2016 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 PIRSF PIRSF001220 2 331 3.5E-95 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS00490 6c4932567cf88c7559d7c40c63e21a9d 331 Pfam PF00710 Asparaginase, N-terminal 7 198 5.7E-61 T 23-04-2016 IPR027474 L-asparaginase, N-terminal UPTC3659_RS01850 75bc594859439452171316eec7777540 514 Gene3D G3DSA:2.60.40.420 358 511 2.9E-32 T 23-04-2016 IPR008972 Cupredoxin UPTC3659_RS01850 75bc594859439452171316eec7777540 514 ProSitePatterns PS00080 Multicopper oxidases signature 2. 495 506 - T 23-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 UPTC3659_RS01850 75bc594859439452171316eec7777540 514 Gene3D G3DSA:2.60.40.420 208 321 1.7E-18 T 23-04-2016 IPR008972 Cupredoxin UPTC3659_RS01850 75bc594859439452171316eec7777540 514 SUPERFAMILY SSF49503 214 321 6.72E-17 T 23-04-2016 IPR008972 Cupredoxin UPTC3659_RS01850 75bc594859439452171316eec7777540 514 PANTHER PTHR11709 69 514 7.0E-89 T 23-04-2016 UPTC3659_RS01850 75bc594859439452171316eec7777540 514 Pfam PF07731 Multicopper oxidase 399 511 8.9E-28 T 23-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 UPTC3659_RS01850 75bc594859439452171316eec7777540 514 Pfam PF00394 Multicopper oxidase 243 324 6.6E-8 T 23-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 UPTC3659_RS01850 75bc594859439452171316eec7777540 514 SUPERFAMILY SSF49503 86 207 1.48E-33 T 23-04-2016 IPR008972 Cupredoxin UPTC3659_RS01850 75bc594859439452171316eec7777540 514 Gene3D G3DSA:2.60.40.420 79 207 3.4E-36 T 23-04-2016 IPR008972 Cupredoxin UPTC3659_RS01850 75bc594859439452171316eec7777540 514 SUPERFAMILY SSF49503 401 512 2.14E-30 T 23-04-2016 IPR008972 Cupredoxin UPTC3659_RS01850 75bc594859439452171316eec7777540 514 Pfam PF07732 Multicopper oxidase 91 207 1.2E-33 T 23-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 UPTC3659_RS01850 75bc594859439452171316eec7777540 514 PANTHER PTHR11709:SF2 69 514 7.0E-89 T 23-04-2016 UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 SUPERFAMILY SSF51735 1 103 1.73E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 SUPERFAMILY SSF51735 212 242 1.73E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 126 143 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 105 240 5.7E-39 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 Gene3D G3DSA:3.40.50.720 3 109 3.6E-6 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 241 30.493 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 PANTHER PTHR20836 1 241 1.7E-62 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 PIRSF PIRSF000161 1 242 2.4E-77 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 102 4.0E-20 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 Gene3D G3DSA:3.30.360.10 110 210 9.4E-35 T 23-04-2016 UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 44 241 8.2E-70 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS08135 66b1a90047384cd2781152741dd1871b 242 SUPERFAMILY SSF55347 104 212 5.01E-33 T 23-04-2016 UPTC3659_RS06420 c685ba8ce92a2907cd0aaa031aa3b168 164 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 163 8.0E-58 T 23-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 UPTC3659_RS06420 c685ba8ce92a2907cd0aaa031aa3b168 164 PANTHER PTHR30435 90 163 2.8E-50 T 23-04-2016 UPTC3659_RS06420 c685ba8ce92a2907cd0aaa031aa3b168 164 PANTHER PTHR30435 1 67 2.8E-50 T 23-04-2016 UPTC3659_RS06420 c685ba8ce92a2907cd0aaa031aa3b168 164 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 113 161 1.1E-11 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UPTC3659_RS06420 c685ba8ce92a2907cd0aaa031aa3b168 164 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site UPTC3659_RS06420 c685ba8ce92a2907cd0aaa031aa3b168 164 Pfam PF00460 Flagella basal body rod protein 10 34 2.0E-9 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UPTC3659_RS06420 c685ba8ce92a2907cd0aaa031aa3b168 164 PANTHER PTHR30435:SF2 90 163 2.8E-50 T 23-04-2016 UPTC3659_RS06420 c685ba8ce92a2907cd0aaa031aa3b168 164 PANTHER PTHR30435:SF2 1 67 2.8E-50 T 23-04-2016 UPTC3659_RS02745 44d6e04ee135d478c7ab8294f159934c 1184 SMART SM00912 27 141 1.7E-12 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS02745 44d6e04ee135d478c7ab8294f159934c 1184 SUPERFAMILY SSF51126 38 230 2.54E-21 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor UPTC3659_RS02745 44d6e04ee135d478c7ab8294f159934c 1184 Pfam PF05860 haemagglutination activity domain 30 141 9.4E-15 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS02745 44d6e04ee135d478c7ab8294f159934c 1184 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 68 138 1.4E-14 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 PANTHER PTHR32089 408 654 1.2E-53 T 23-04-2016 UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 PANTHER PTHR32089 98 354 1.2E-53 T 23-04-2016 UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 500 654 3.3E-37 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 SUPERFAMILY SSF58104 463 662 3.79E-46 T 23-04-2016 UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 SUPERFAMILY SSF58104 344 374 3.79E-46 T 23-04-2016 UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 SUPERFAMILY SSF103190 79 192 5.18E-8 T 23-04-2016 IPR029151 Periplasmic sensor domain-like UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 Pfam PF02743 Cache domain 59 229 6.5E-23 T 23-04-2016 IPR033479 Double Cache domain 1 UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 Gene3D G3DSA:1.10.287.950 470 654 1.8E-43 T 23-04-2016 UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 Gene3D G3DSA:3.30.450.20 78 183 1.3E-16 T 23-04-2016 UPTC3659_RS08040 c4e7206acf0e08e5a1609ec8d7e91253 663 SMART SM00283 453 659 2.6E-24 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS04400 860f5c2b1417b40723d9d128c0b55808 123 PANTHER PTHR34773 7 123 9.4E-21 T 23-04-2016 UPTC3659_RS04400 860f5c2b1417b40723d9d128c0b55808 123 SUPERFAMILY SSF101116 5 122 1.57E-31 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 UPTC3659_RS04400 860f5c2b1417b40723d9d128c0b55808 123 Pfam PF02561 Flagellar protein FliS 7 120 3.1E-30 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 UPTC3659_RS04400 860f5c2b1417b40723d9d128c0b55808 123 Gene3D G3DSA:1.20.120.340 5 123 1.4E-30 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 UPTC3659_RS04400 860f5c2b1417b40723d9d128c0b55808 123 PIRSF PIRSF039090 1 123 3.2E-26 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 UPTC3659_RS04400 860f5c2b1417b40723d9d128c0b55808 123 TIGRFAM TIGR00208 fliS: flagellar protein FliS 2 122 7.0E-37 T 23-04-2016 IPR003713 Flagellar protein FliS GO:0044780 UPTC3659_RS07065 012683768a6ddeb8e7e9b53cf3d192d6 774 Pfam PF00391 PEP-utilising enzyme, mobile domain 699 767 1.7E-10 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 UPTC3659_RS07065 012683768a6ddeb8e7e9b53cf3d192d6 774 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 14 98 2.0E-4 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 UPTC3659_RS07065 012683768a6ddeb8e7e9b53cf3d192d6 774 Gene3D G3DSA:3.30.470.20 118 211 3.5E-7 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 UPTC3659_RS07065 012683768a6ddeb8e7e9b53cf3d192d6 774 Gene3D G3DSA:3.50.30.10 697 772 8.0E-13 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 UPTC3659_RS07065 012683768a6ddeb8e7e9b53cf3d192d6 774 Gene3D G3DSA:3.30.1490.20 14 100 1.6E-6 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 UPTC3659_RS07065 012683768a6ddeb8e7e9b53cf3d192d6 774 SUPERFAMILY SSF56059 49 216 5.06E-11 T 23-04-2016 UPTC3659_RS07065 012683768a6ddeb8e7e9b53cf3d192d6 774 SUPERFAMILY SSF52009 696 771 8.5E-13 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 SUPERFAMILY SSF52540 6 280 2.17E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 179 2.7E-31 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Gene3D G3DSA:3.30.70.870 403 478 1.2E-39 T 23-04-2016 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 112.852 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 SUPERFAMILY SSF54211 477 596 1.69E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Gene3D G3DSA:2.40.30.10 304 402 1.0E-35 T 23-04-2016 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 SUPERFAMILY SSF50447 264 402 3.79E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Pfam PF03144 Elongation factor Tu domain 2 322 389 1.1E-13 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.6E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.6E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.6E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.6E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Gene3D G3DSA:3.30.70.240 601 688 3.2E-36 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 SUPERFAMILY SSF54980 601 688 2.25E-32 T 23-04-2016 IPR009022 Elongation factor G, III-V domain UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Pfam PF00679 Elongation factor G C-terminus 598 684 5.0E-34 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PANTHER PTHR23115:SF66 254 282 0.0 T 23-04-2016 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PANTHER PTHR23115:SF66 301 689 0.0 T 23-04-2016 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PANTHER PTHR23115:SF66 2 177 0.0 T 23-04-2016 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Pfam PF00009 Elongation factor Tu GTP binding domain 8 280 4.2E-69 T 23-04-2016 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 SMART SM00838 598 685 9.2E-62 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Gene3D G3DSA:3.30.230.10 482 600 2.4E-54 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Pfam PF14492 Elongation Factor G, domain II 402 476 1.5E-35 T 23-04-2016 IPR009022 Elongation factor G, III-V domain UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PANTHER PTHR23115 254 282 0.0 T 23-04-2016 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PANTHER PTHR23115 301 689 0.0 T 23-04-2016 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 PANTHER PTHR23115 2 177 0.0 T 23-04-2016 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 SUPERFAMILY SSF54980 402 479 1.65E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 SMART SM00889 478 596 2.9E-79 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Gene3D G3DSA:3.40.50.300 6 285 2.0E-108 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02380 4dafde08a91acafd9fe96cc9852760ff 691 Pfam PF03764 Elongation factor G, domain IV 477 595 8.1E-51 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Pfam PF04560 RNA polymerase Rpb2, domain 7 1296 1371 1.9E-24 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:3.90.1100.10 673 726 2.6E-133 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:3.90.1100.10 456 605 2.6E-133 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:3.90.1100.10 19 154 2.6E-133 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 SUPERFAMILY SSF64484 369 949 0.0 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 SUPERFAMILY SSF64484 1067 1375 0.0 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 SUPERFAMILY SSF64484 11 228 0.0 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:2.30.150.10 606 669 3.0E-21 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 12 1372 11.603 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1369 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 PANTHER PTHR20856:SF20 1061 1156 0.0 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 PANTHER PTHR20856:SF20 340 940 0.0 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 PANTHER PTHR20856:SF20 1 232 0.0 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 PANTHER PTHR20856:SF20 1212 1376 0.0 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Pfam PF00562 RNA polymerase Rpb2, domain 6 732 1293 3.6E-146 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Pfam PF04563 RNA polymerase beta subunit 26 513 2.5E-22 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Pfam PF04565 RNA polymerase Rpb2, domain 3 527 595 2.9E-30 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 PANTHER PTHR20856 1061 1156 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 PANTHER PTHR20856 340 940 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 PANTHER PTHR20856 1 232 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 PANTHER PTHR20856 1212 1376 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Pfam PF04561 RNA polymerase Rpb2, domain 2 154 237 1.2E-11 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Pfam PF04561 RNA polymerase Rpb2, domain 2 360 466 1.6E-17 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:2.40.270.10 803 830 6.6E-82 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:2.40.270.10 1088 1272 6.6E-82 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:2.40.50.100 729 802 2.0E-24 T 23-04-2016 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Pfam PF10385 RNA polymerase beta subunit external 1 domain 605 668 1.5E-19 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:2.40.50.150 838 947 1.6E-47 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:2.40.50.150 1073 1087 1.6E-47 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1091 1103 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:3.90.1110.10 356 455 4.2E-60 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02360 6b2dcc9419aa39cf2b291d5b4b044819 1377 Gene3D G3DSA:3.90.1110.10 156 232 4.2E-60 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 SUPERFAMILY SSF50615 10 93 1.28E-27 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 496 3.8E-50 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 91 5.6E-16 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 PIRSF PIRSF039088 1 501 1.0E-258 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.0E-77 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 500 1.3E-260 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 Gene3D G3DSA:3.40.50.300 95 371 1.4E-117 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 Gene3D G3DSA:2.40.30.20 1 92 8.8E-35 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 SUPERFAMILY SSF47917 372 499 8.63E-48 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 Gene3D G3DSA:1.20.150.20 372 499 4.5E-53 T 23-04-2016 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 501 52.009 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 PANTHER PTHR15184:SF3 1 485 2.2E-302 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 SUPERFAMILY SSF52540 96 370 5.57E-100 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01045 9b65371225006b7c76f83f10be5a8566 501 PANTHER PTHR15184 1 485 2.2E-302 T 23-04-2016 UPTC3659_RS03585 7adea4560d31abdb9b920a293e8633fa 164 Pfam PF08447 PAS fold 26 109 3.6E-15 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 UPTC3659_RS03585 7adea4560d31abdb9b920a293e8633fa 164 PANTHER PTHR32089 15 127 1.0E-21 T 23-04-2016 UPTC3659_RS03585 7adea4560d31abdb9b920a293e8633fa 164 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 109 2.9E-15 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS03585 7adea4560d31abdb9b920a293e8633fa 164 Gene3D G3DSA:3.30.450.20 12 108 3.8E-23 T 23-04-2016 UPTC3659_RS03585 7adea4560d31abdb9b920a293e8633fa 164 PANTHER PTHR32089:SF52 15 127 1.0E-21 T 23-04-2016 UPTC3659_RS03585 7adea4560d31abdb9b920a293e8633fa 164 SUPERFAMILY SSF55785 15 111 3.7E-26 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS03585 7adea4560d31abdb9b920a293e8633fa 164 SMART SM00091 4 70 6.1E-4 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 SUPERFAMILY SSF55031 172 277 6.58E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 SUPERFAMILY SSF53187 284 365 1.48E-54 T 23-04-2016 UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 SUPERFAMILY SSF53187 3 171 1.48E-54 T 23-04-2016 UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 Pfam PF01546 Peptidase family M20/M25/M40 61 364 2.1E-37 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 Pfam PF07687 Peptidase dimerisation domain 168 269 1.6E-14 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 94 129 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 Gene3D G3DSA:3.30.70.360 181 275 1.9E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 4 365 1.5E-147 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 Gene3D G3DSA:3.40.630.10 308 365 1.8E-62 T 23-04-2016 UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 Gene3D G3DSA:3.40.630.10 2 180 1.8E-62 T 23-04-2016 UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 1 366 42.365 T 23-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 60 69 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 UPTC3659_RS06865 3d4100ed6e2c1f6bbabb64224acfd018 366 PANTHER PTHR11014 3 365 4.7E-66 T 23-04-2016 UPTC3659_RS01205 12960d2bb9886ab4bfcd36cd08a15f6d 524 SUPERFAMILY SSF52540 20 128 9.0E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01205 12960d2bb9886ab4bfcd36cd08a15f6d 524 SUPERFAMILY SSF52540 290 373 9.0E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01205 12960d2bb9886ab4bfcd36cd08a15f6d 524 Gene3D G3DSA:3.40.50.300 70 103 6.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01205 12960d2bb9886ab4bfcd36cd08a15f6d 524 Gene3D G3DSA:3.40.50.300 176 198 6.4E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01205 12960d2bb9886ab4bfcd36cd08a15f6d 524 PANTHER PTHR37291 7 515 1.0E-73 T 23-04-2016 UPTC3659_RS01205 12960d2bb9886ab4bfcd36cd08a15f6d 524 Pfam PF07728 AAA domain (dynein-related subfamily) 274 368 2.9E-10 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 UPTC3659_RS01205 12960d2bb9886ab4bfcd36cd08a15f6d 524 Gene3D G3DSA:3.40.50.300 31 69 3.5E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01205 12960d2bb9886ab4bfcd36cd08a15f6d 524 Gene3D G3DSA:3.40.50.300 246 373 3.5E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05290 494de114bdfb51c92ebe2b8491d26e01 350 Gene3D G3DSA:1.25.40.20 121 290 5.7E-21 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05290 494de114bdfb51c92ebe2b8491d26e01 350 Pfam PF12796 Ankyrin repeats (3 copies) 167 261 1.9E-8 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05290 494de114bdfb51c92ebe2b8491d26e01 350 SUPERFAMILY SSF48403 96 288 2.9E-19 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05290 494de114bdfb51c92ebe2b8491d26e01 350 SMART SM00248 99 139 630.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05290 494de114bdfb51c92ebe2b8491d26e01 350 SMART SM00248 189 220 910.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05290 494de114bdfb51c92ebe2b8491d26e01 350 SMART SM00248 231 260 0.011 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05290 494de114bdfb51c92ebe2b8491d26e01 350 SMART SM00248 153 185 88.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05290 494de114bdfb51c92ebe2b8491d26e01 350 PANTHER PTHR24198 125 288 1.3E-18 T 23-04-2016 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Gene3D G3DSA:1.10.8.60 344 428 1.9E-32 T 23-04-2016 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Gene3D G3DSA:1.10.8.60 776 855 1.8E-24 T 23-04-2016 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 316 5.6E-15 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 SUPERFAMILY SSF81923 7 156 4.51E-24 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 9.4E-39 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 9.4E-39 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 9.4E-39 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 9.4E-39 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Gene3D G3DSA:3.40.50.300 553 775 3.1E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 SUPERFAMILY SSF52540 159 548 1.23E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 PANTHER PTHR11638 1 857 0.0 T 23-04-2016 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 759 5.0E-52 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 PANTHER PTHR11638:SF18 1 857 0.0 T 23-04-2016 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 SMART SM01086 765 854 4.2E-28 T 23-04-2016 IPR019489 Clp ATPase, C-terminal UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 SUPERFAMILY SSF52540 550 849 7.57E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 3.0E-20 T 23-04-2016 IPR019489 Clp ATPase, C-terminal UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 SMART SM00382 600 758 3.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 SMART SM00382 199 343 7.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Gene3D G3DSA:1.10.1780.10 8 148 1.2E-20 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Gene3D G3DSA:3.40.50.300 161 342 4.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 142 0.3 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 68 1.1E-5 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 UPTC3659_RS04095 dc5f5464216509e796659cd016005f42 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 UPTC3659_RS06390 52c464410785a10276fd389b0069bb51 151 Pfam PF01668 SmpB protein 4 66 6.0E-27 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 UPTC3659_RS06390 52c464410785a10276fd389b0069bb51 151 PANTHER PTHR30308 3 151 2.3E-65 T 23-04-2016 UPTC3659_RS06390 52c464410785a10276fd389b0069bb51 151 PANTHER PTHR30308:SF2 3 151 2.3E-65 T 23-04-2016 UPTC3659_RS06390 52c464410785a10276fd389b0069bb51 151 Hamap MF_00023 SsrA-binding protein [smpB]. 1 151 63.694 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 UPTC3659_RS06390 52c464410785a10276fd389b0069bb51 151 Gene3D G3DSA:2.40.280.10 3 125 5.6E-48 T 23-04-2016 IPR023620 Small protein B UPTC3659_RS06390 52c464410785a10276fd389b0069bb51 151 SUPERFAMILY SSF74982 3 130 5.75E-46 T 23-04-2016 IPR023620 Small protein B UPTC3659_RS06390 52c464410785a10276fd389b0069bb51 151 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 5 130 5.0E-65 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 UPTC3659_RS06390 52c464410785a10276fd389b0069bb51 151 TIGRFAM TIGR00086 smpB: SsrA-binding protein 5 148 8.4E-55 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 UPTC3659_RS08335 ae8b1adb282ca34f08a4bd59a253ce42 511 SUPERFAMILY SSF53850 18 499 1.21E-125 T 23-04-2016 UPTC3659_RS08335 ae8b1adb282ca34f08a4bd59a253ce42 511 Gene3D G3DSA:3.40.190.10 122 268 5.5E-43 T 23-04-2016 UPTC3659_RS08335 ae8b1adb282ca34f08a4bd59a253ce42 511 PANTHER PTHR30290 22 508 3.5E-125 T 23-04-2016 UPTC3659_RS08335 ae8b1adb282ca34f08a4bd59a253ce42 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 62 418 2.5E-80 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain UPTC3659_RS08335 ae8b1adb282ca34f08a4bd59a253ce42 511 PIRSF PIRSF002741 16 509 6.0E-120 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 UPTC3659_RS08335 ae8b1adb282ca34f08a4bd59a253ce42 511 PANTHER PTHR30290:SF27 22 508 3.5E-125 T 23-04-2016 UPTC3659_RS08335 ae8b1adb282ca34f08a4bd59a253ce42 511 Gene3D G3DSA:3.10.105.10 269 475 6.1E-49 T 23-04-2016 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 PANTHER PTHR11252:SF0 1 699 1.2E-249 T 23-04-2016 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 SUPERFAMILY SSF55666 457 547 4.07E-22 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Pfam PF03725 3' exoribonuclease family, domain 2 142 216 1.6E-16 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Pfam PF03725 3' exoribonuclease family, domain 2 467 536 1.6E-5 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 SUPERFAMILY SSF54211 312 499 2.48E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Pfam PF00013 KH domain 564 619 1.5E-7 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 PANTHER PTHR11252 1 699 1.2E-249 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 SUPERFAMILY SSF46915 237 332 2.49E-15 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 13 700 5.6E-218 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Gene3D G3DSA:1.10.10.400 242 321 5.9E-16 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Pfam PF00575 S1 RNA binding domain 640 701 3.0E-8 T 23-04-2016 IPR003029 S1 domain GO:0003676 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 SUPERFAMILY SSF50249 636 700 8.21E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 SUPERFAMILY SSF55666 140 235 1.12E-21 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 249 326 3.6E-7 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Gene3D G3DSA:3.30.230.70 4 230 2.3E-69 T 23-04-2016 IPR027408 PNPase/RNase PH domain UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Gene3D G3DSA:3.30.230.70 322 547 2.0E-73 T 23-04-2016 IPR027408 PNPase/RNase PH domain UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Gene3D G3DSA:3.30.1370.10 559 625 1.0E-15 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Pfam PF01138 3' exoribonuclease family, domain 1 331 462 3.4E-18 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Pfam PF01138 3' exoribonuclease family, domain 1 18 139 2.0E-12 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 SMART SM00316 641 702 1.7E-12 T 23-04-2016 IPR022967 RNA-binding domain, S1 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 PIRSF PIRSF005499 1 702 8.5E-258 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 SUPERFAMILY SSF54791 561 643 3.8E-14 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 SUPERFAMILY SSF54211 3 139 2.02E-39 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Gene3D G3DSA:2.40.50.140 630 700 2.3E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 SMART SM00322 558 624 1.1E-7 T 23-04-2016 IPR004087 K Homology domain GO:0003676 UPTC3659_RS02695 69be3479c5130ddefe898b9abe8b8001 702 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 1 702 26.024 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 SUPERFAMILY SSF64518 283 306 1.01E-5 T 23-04-2016 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 SUPERFAMILY SSF64518 366 607 1.01E-5 T 23-04-2016 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 SUPERFAMILY SSF64518 134 256 1.01E-5 T 23-04-2016 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 Pfam PF00460 Flagella basal body rod protein 7 32 1.8E-4 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 361 9.7E-71 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 2.0E-11 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 PRINTS PR01005 Flagellar hook-associated protein signature 51 73 2.0E-11 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 PRINTS PR01005 Flagellar hook-associated protein signature 159 183 2.0E-11 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 PRINTS PR01005 Flagellar hook-associated protein signature 126 146 2.0E-11 T 23-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 530 607 7.2E-13 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 PANTHER PTHR30033 1 609 8.0E-59 T 23-04-2016 UPTC3659_RS02075 f6b3dab2e7ec0425ad8d94b972823dd5 609 PANTHER PTHR30033:SF1 1 609 8.0E-59 T 23-04-2016 UPTC3659_RS07035 c63786aeec2f05d7e8c64481eb8a1122 454 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 151 360 1.4E-9 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 UPTC3659_RS07035 c63786aeec2f05d7e8c64481eb8a1122 454 PIRSF PIRSF000484 1 454 1.7E-136 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 UPTC3659_RS07035 c63786aeec2f05d7e8c64481eb8a1122 454 SUPERFAMILY SSF51690 134 452 3.34E-100 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 UPTC3659_RS07035 c63786aeec2f05d7e8c64481eb8a1122 454 PANTHER PTHR11098:SF1 1 454 6.2E-146 T 23-04-2016 UPTC3659_RS07035 c63786aeec2f05d7e8c64481eb8a1122 454 Gene3D G3DSA:3.20.140.10 1 381 4.6E-110 T 23-04-2016 UPTC3659_RS07035 c63786aeec2f05d7e8c64481eb8a1122 454 PANTHER PTHR11098 1 454 6.2E-146 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 UPTC3659_RS07035 c63786aeec2f05d7e8c64481eb8a1122 454 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 4 443 3.8E-158 T 23-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 UPTC3659_RS07035 c63786aeec2f05d7e8c64481eb8a1122 454 SUPERFAMILY SSF54675 2 133 9.22E-46 T 23-04-2016 UPTC3659_RS02940 e22c572681412c684c5bb35809a0dfba 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 2.0E-16 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02940 e22c572681412c684c5bb35809a0dfba 44 PANTHER PTHR14503 1 44 1.6E-17 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02940 e22c572681412c684c5bb35809a0dfba 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02940 e22c572681412c684c5bb35809a0dfba 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.605 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02940 e22c572681412c684c5bb35809a0dfba 44 Pfam PF00468 Ribosomal protein L34 1 44 1.1E-22 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02940 e22c572681412c684c5bb35809a0dfba 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.1E-24 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06565 1d392166aefd7a3c6bcf1ebdab76bc6c 211 Gene3D G3DSA:3.40.50.300 2 207 1.1E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06565 1d392166aefd7a3c6bcf1ebdab76bc6c 211 SUPERFAMILY SSF52540 15 210 6.5E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06565 1d392166aefd7a3c6bcf1ebdab76bc6c 211 SMART SM00382 27 208 3.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS06565 1d392166aefd7a3c6bcf1ebdab76bc6c 211 PANTHER PTHR24220 5 207 4.7E-67 T 23-04-2016 UPTC3659_RS06565 1d392166aefd7a3c6bcf1ebdab76bc6c 211 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS06565 1d392166aefd7a3c6bcf1ebdab76bc6c 211 Pfam PF00005 ABC transporter 19 160 2.8E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS01855 c1cf7874ab2bbe798eaee0fb5c43a21d 387 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 12 387 4.0E-180 T 23-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 UPTC3659_RS01855 c1cf7874ab2bbe798eaee0fb5c43a21d 387 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 250 362 2.3E-7 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS01855 c1cf7874ab2bbe798eaee0fb5c43a21d 387 SUPERFAMILY SSF51419 20 248 4.65E-44 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS01855 c1cf7874ab2bbe798eaee0fb5c43a21d 387 PANTHER PTHR11482 2 386 1.4E-150 T 23-04-2016 UPTC3659_RS01855 c1cf7874ab2bbe798eaee0fb5c43a21d 387 SUPERFAMILY SSF50621 214 377 1.44E-27 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS01855 c1cf7874ab2bbe798eaee0fb5c43a21d 387 PANTHER PTHR11482:SF38 2 386 1.4E-150 T 23-04-2016 UPTC3659_RS01855 c1cf7874ab2bbe798eaee0fb5c43a21d 387 Gene3D G3DSA:2.40.37.10 239 365 2.0E-22 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS01855 c1cf7874ab2bbe798eaee0fb5c43a21d 387 PIRSF PIRSF038941 3 387 1.4E-156 T 23-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 UPTC3659_RS01855 c1cf7874ab2bbe798eaee0fb5c43a21d 387 Gene3D G3DSA:3.20.20.10 25 238 4.3E-17 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 148 3.7E-24 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 PANTHER PTHR11649:SF3 2 290 1.3E-75 T 23-04-2016 UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 Pfam PF07650 KH domain 201 276 2.7E-14 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 Pfam PF01926 50S ribosome-binding GTPase 6 117 2.6E-19 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 SUPERFAMILY SSF54814 175 288 4.84E-31 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 Gene3D G3DSA:3.40.50.300 4 167 1.0E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 Hamap MF_00367 GTPase Era [era]. 1 288 30.403 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 SUPERFAMILY SSF52540 6 174 8.39E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 Gene3D G3DSA:3.30.300.20 182 285 1.8E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 TIGRFAM TIGR00436 era: GTP-binding protein Era 4 271 6.9E-63 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 UPTC3659_RS04380 4e949e89807765ed6a6acf93c31de146 290 PANTHER PTHR11649 2 290 1.3E-75 T 23-04-2016 UPTC3659_RS02350 d5c99cebec9b4d9d34b2f4be7f50fd64 159 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 156 23.037 T 23-04-2016 IPR022973 Ribosomal protein L10 UPTC3659_RS02350 d5c99cebec9b4d9d34b2f4be7f50fd64 159 PANTHER PTHR11560 1 158 3.7E-31 T 23-04-2016 UPTC3659_RS02350 d5c99cebec9b4d9d34b2f4be7f50fd64 159 Pfam PF00466 Ribosomal protein L10 1 94 1.1E-20 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 UPTC3659_RS02350 d5c99cebec9b4d9d34b2f4be7f50fd64 159 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 23-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02350 d5c99cebec9b4d9d34b2f4be7f50fd64 159 SUPERFAMILY SSF160369 1 155 1.31E-41 T 23-04-2016 UPTC3659_RS08465 21c8c1bf2f158a79ffd7fa1237b39050 190 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 183 2.1E-77 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 UPTC3659_RS08465 21c8c1bf2f158a79ffd7fa1237b39050 190 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 23-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 UPTC3659_RS08465 21c8c1bf2f158a79ffd7fa1237b39050 190 PANTHER PTHR11109 3 185 9.4E-110 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 UPTC3659_RS08465 21c8c1bf2f158a79ffd7fa1237b39050 190 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 1 183 40.767 T 23-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 UPTC3659_RS08465 21c8c1bf2f158a79ffd7fa1237b39050 190 Gene3D G3DSA:1.10.286.10 2 52 4.7E-22 T 23-04-2016 UPTC3659_RS08465 21c8c1bf2f158a79ffd7fa1237b39050 190 Gene3D G3DSA:3.30.1130.10 55 184 5.7E-61 T 23-04-2016 UPTC3659_RS08465 21c8c1bf2f158a79ffd7fa1237b39050 190 SUPERFAMILY SSF55620 3 183 2.59E-78 T 23-04-2016 UPTC3659_RS08465 21c8c1bf2f158a79ffd7fa1237b39050 190 Pfam PF01227 GTP cyclohydrolase I 6 182 5.2E-78 T 23-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 599 37.029 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 Gene3D G3DSA:3.40.50.10490 245 438 6.6E-68 T 23-04-2016 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 SUPERFAMILY SSF56235 2 224 3.09E-63 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 599 3.3E-235 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 Pfam PF01380 SIS domain 287 414 1.5E-31 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 Pfam PF01380 SIS domain 462 541 2.8E-10 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 PANTHER PTHR10937:SF0 1 599 2.2E-242 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 SUPERFAMILY SSF53697 245 599 5.84E-93 T 23-04-2016 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 PANTHER PTHR10937 1 599 2.2E-242 T 23-04-2016 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 Pfam PF13522 Glutamine amidotransferase domain 65 193 9.7E-21 T 23-04-2016 UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 Gene3D G3DSA:3.60.20.10 2 224 1.8E-67 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal UPTC3659_RS02240 571833210f6b94a4def488f3c03b61a2 599 Gene3D G3DSA:3.40.50.10490 442 599 1.7E-46 T 23-04-2016 UPTC3659_RS01655 505d70f50d35f28b15a15f26f2cbd01c 193 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 7 188 9.7E-79 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 UPTC3659_RS01655 505d70f50d35f28b15a15f26f2cbd01c 193 Pfam PF01583 Adenylylsulphate kinase 25 176 4.9E-72 T 23-04-2016 UPTC3659_RS01655 505d70f50d35f28b15a15f26f2cbd01c 193 PANTHER PTHR11055 1 192 1.3E-114 T 23-04-2016 UPTC3659_RS01655 505d70f50d35f28b15a15f26f2cbd01c 193 Gene3D G3DSA:3.40.50.300 1 190 5.9E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01655 505d70f50d35f28b15a15f26f2cbd01c 193 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 23 193 37.37 T 23-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 UPTC3659_RS01655 505d70f50d35f28b15a15f26f2cbd01c 193 SUPERFAMILY SSF52540 19 190 2.08E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 Gene3D G3DSA:3.40.50.720 130 258 1.6E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 Gene3D G3DSA:1.10.287.70 36 116 3.5E-12 T 23-04-2016 UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 SUPERFAMILY SSF51735 133 281 9.84E-18 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 SUPERFAMILY SSF81324 31 157 8.63E-18 T 23-04-2016 UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 Pfam PF02080 TrkA-C domain 294 360 2.7E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 Pfam PF02254 TrkA-N domain 137 258 5.2E-16 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 PANTHER PTHR16254:SF21 38 303 1.1E-46 T 23-04-2016 UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 SUPERFAMILY SSF116726 288 364 4.05E-13 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 Pfam PF07885 Ion channel 40 112 2.3E-10 T 23-04-2016 IPR013099 Potassium channel domain UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 Gene3D G3DSA:3.30.70.1450 291 366 1.0E-11 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS06240 d01504cf3d1ce0266fcc6bbf126fb421 375 PANTHER PTHR16254 38 303 1.1E-46 T 23-04-2016 UPTC3659_RS03600 41d8248deaca6e982e32ab24bc32b352 368 PANTHER PTHR22939:SF78 144 367 2.1E-57 T 23-04-2016 UPTC3659_RS03600 41d8248deaca6e982e32ab24bc32b352 368 Gene3D G3DSA:2.30.42.10 110 206 9.5E-19 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS03600 41d8248deaca6e982e32ab24bc32b352 368 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 23 183 1.8E-49 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 UPTC3659_RS03600 41d8248deaca6e982e32ab24bc32b352 368 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 140 365 6.3E-52 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 UPTC3659_RS03600 41d8248deaca6e982e32ab24bc32b352 368 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 144 179 3.8E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS03600 41d8248deaca6e982e32ab24bc32b352 368 SMART SM00228 134 196 6.6E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS03600 41d8248deaca6e982e32ab24bc32b352 368 SUPERFAMILY SSF50156 114 205 1.09E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS03600 41d8248deaca6e982e32ab24bc32b352 368 Pfam PF02163 Peptidase family M50 25 353 8.5E-68 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 UPTC3659_RS03600 41d8248deaca6e982e32ab24bc32b352 368 PANTHER PTHR22939 144 367 2.1E-57 T 23-04-2016 UPTC3659_RS02320 73bea4a6dbc742f4cddd56626fc1ffd6 52 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 1.6E-22 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02320 73bea4a6dbc742f4cddd56626fc1ffd6 52 PANTHER PTHR15238 1 52 2.2E-22 T 23-04-2016 UPTC3659_RS02320 73bea4a6dbc742f4cddd56626fc1ffd6 52 SUPERFAMILY SSF57829 1 49 5.13E-19 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 UPTC3659_RS02320 73bea4a6dbc742f4cddd56626fc1ffd6 52 PANTHER PTHR15238:SF3 1 52 2.2E-22 T 23-04-2016 UPTC3659_RS02320 73bea4a6dbc742f4cddd56626fc1ffd6 52 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02320 73bea4a6dbc742f4cddd56626fc1ffd6 52 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.663 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02320 73bea4a6dbc742f4cddd56626fc1ffd6 52 Pfam PF00471 Ribosomal protein L33 3 49 1.6E-21 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00985 12aa5c8f49a5018891f84ec730755838 344 SUPERFAMILY SSF46626 197 341 1.26E-31 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00985 12aa5c8f49a5018891f84ec730755838 344 PANTHER PTHR30600:SF7 61 330 5.1E-87 T 23-04-2016 UPTC3659_RS00985 12aa5c8f49a5018891f84ec730755838 344 Pfam PF03150 Di-haem cytochrome c peroxidase 61 209 5.4E-45 T 23-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 UPTC3659_RS00985 12aa5c8f49a5018891f84ec730755838 344 Gene3D G3DSA:1.10.760.10 202 330 1.6E-34 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00985 12aa5c8f49a5018891f84ec730755838 344 PIRSF PIRSF000294 1 344 1.3E-126 T 23-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 UPTC3659_RS00985 12aa5c8f49a5018891f84ec730755838 344 Pfam PF00034 Cytochrome c 218 304 6.1E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00985 12aa5c8f49a5018891f84ec730755838 344 PANTHER PTHR30600 61 330 5.1E-87 T 23-04-2016 UPTC3659_RS00985 12aa5c8f49a5018891f84ec730755838 344 SUPERFAMILY SSF46626 54 198 2.4E-44 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00985 12aa5c8f49a5018891f84ec730755838 344 Gene3D G3DSA:1.10.760.10 57 201 5.9E-44 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 Gene3D G3DSA:2.40.160.20 31 193 1.2E-14 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 SUPERFAMILY SSF56925 17 176 3.66E-19 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 SUPERFAMILY SSF103088 214 323 2.88E-33 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 Pfam PF13505 Outer membrane protein beta-barrel domain 22 162 1.9E-8 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 Gene3D G3DSA:3.30.1330.60 217 324 5.2E-36 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 Pfam PF00691 OmpA family 224 318 1.1E-20 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 PANTHER PTHR30128 223 321 8.0E-38 T 23-04-2016 UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 PRINTS PR01021 OMPA domain signature 254 269 4.2E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 PRINTS PR01021 OMPA domain signature 224 246 4.2E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 PRINTS PR01021 OMPA domain signature 269 285 4.2E-12 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 UPTC3659_RS02025 74c3640b220cb2b6c4dbca2bcd4a069f 328 TIGRFAM TIGR04565 OMP_myx_plus: outer membrane beta-barrel protein 34 172 5.2E-18 T 23-04-2016 IPR030820 Outer membrane beta-barrel protein, Proteobacteria UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 460 1.2E-182 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PANTHER PTHR11444 1 460 2.8E-216 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 SUPERFAMILY SSF48557 11 463 7.23E-140 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00149 Fumarate lyase superfamily signature 236 263 3.3E-22 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00149 Fumarate lyase superfamily signature 107 125 3.3E-22 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00149 Fumarate lyase superfamily signature 152 170 3.3E-22 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 3.3E-22 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 458 40.384 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 Gene3D G3DSA:1.10.40.30 379 436 4.1E-29 T 23-04-2016 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PANTHER PTHR11444:SF3 1 460 2.8E-216 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 Gene3D G3DSA:1.10.275.10 7 111 1.5E-37 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 Pfam PF00206 Lyase 11 305 3.7E-74 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 Pfam PF14698 Argininosuccinate lyase C-terminal 368 435 2.0E-23 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 5.6E-55 T 23-04-2016 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00145 Argininosuccinate lyase family signature 147 167 5.6E-55 T 23-04-2016 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00145 Argininosuccinate lyase family signature 106 128 5.6E-55 T 23-04-2016 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00145 Argininosuccinate lyase family signature 198 214 5.6E-55 T 23-04-2016 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00145 Argininosuccinate lyase family signature 236 260 5.6E-55 T 23-04-2016 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 PRINTS PR00145 Argininosuccinate lyase family signature 315 334 5.6E-55 T 23-04-2016 UPTC3659_RS01470 4002cf66c6a43974c3beb441ddbd5161 467 Gene3D G3DSA:1.20.200.10 112 378 5.0E-94 T 23-04-2016 UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 Pfam PF04055 Radical SAM superfamily 141 311 1.1E-23 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 5 425 7.5E-117 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 SUPERFAMILY SSF102114 131 352 2.62E-50 T 23-04-2016 UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 PANTHER PTHR11918:SF57 1 437 8.2E-129 T 23-04-2016 UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 SMART SM00729 136 352 2.1E-50 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 PANTHER PTHR11918 1 437 8.2E-129 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 2 432 55.146 T 23-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 Gene3D G3DSA:3.80.30.20 136 359 3.0E-70 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 Gene3D G3DSA:2.40.50.140 394 433 2.7E-4 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 Pfam PF00919 Uncharacterized protein family UPF0004 3 98 2.2E-27 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 UPTC3659_RS01385 b9fada66ca5af9ad99deb11ad4a17b35 438 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 389 1.8E-105 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 UPTC3659_RS07905 18ba6292a3f32744d1a97e68462e9fce 323 Gene3D G3DSA:3.20.20.70 4 323 2.7E-71 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS07905 18ba6292a3f32744d1a97e68462e9fce 323 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 23-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 UPTC3659_RS07905 18ba6292a3f32744d1a97e68462e9fce 323 PANTHER PTHR10683:SF6 20 269 6.4E-31 T 23-04-2016 UPTC3659_RS07905 18ba6292a3f32744d1a97e68462e9fce 323 SUPERFAMILY SSF51569 4 323 7.2E-58 T 23-04-2016 UPTC3659_RS07905 18ba6292a3f32744d1a97e68462e9fce 323 PANTHER PTHR10683 20 269 6.4E-31 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 UPTC3659_RS07905 18ba6292a3f32744d1a97e68462e9fce 323 Hamap MF_00493 Transaldolase [tal]. 1 323 67.089 T 23-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 UPTC3659_RS07905 18ba6292a3f32744d1a97e68462e9fce 323 PIRSF PIRSF036915 2 323 7.8E-53 T 23-04-2016 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 UPTC3659_RS07905 18ba6292a3f32744d1a97e68462e9fce 323 Pfam PF00923 Transaldolase 6 322 7.9E-73 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 UPTC3659_RS06955 eaddda97715e44e522dc22c163066385 218 Pfam PF00005 ABC transporter 20 165 3.4E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS06955 eaddda97715e44e522dc22c163066385 218 Gene3D G3DSA:3.40.50.300 2 215 5.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06955 eaddda97715e44e522dc22c163066385 218 SUPERFAMILY SSF52540 4 215 2.55E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06955 eaddda97715e44e522dc22c163066385 218 PANTHER PTHR24220 6 212 4.7E-96 T 23-04-2016 UPTC3659_RS06955 eaddda97715e44e522dc22c163066385 218 PANTHER PTHR24220:SF578 6 212 4.7E-96 T 23-04-2016 UPTC3659_RS06955 eaddda97715e44e522dc22c163066385 218 SMART SM00382 29 213 6.1E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS06955 eaddda97715e44e522dc22c163066385 218 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS06625 aeaba978d934b3ba2c9973113a15c161 221 Gene3D G3DSA:1.10.10.10 136 219 8.0E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS06625 aeaba978d934b3ba2c9973113a15c161 221 SUPERFAMILY SSF52172 4 120 1.71E-31 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS06625 aeaba978d934b3ba2c9973113a15c161 221 Gene3D G3DSA:3.40.50.2300 3 126 9.6E-33 T 23-04-2016 UPTC3659_RS06625 aeaba978d934b3ba2c9973113a15c161 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 219 3.0E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS06625 aeaba978d934b3ba2c9973113a15c161 221 SUPERFAMILY SSF46894 134 220 7.65E-17 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UPTC3659_RS06625 aeaba978d934b3ba2c9973113a15c161 221 Pfam PF00072 Response regulator receiver domain 5 114 2.5E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS06625 aeaba978d934b3ba2c9973113a15c161 221 SMART SM00448 3 114 2.0E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS06625 aeaba978d934b3ba2c9973113a15c161 221 PANTHER PTHR26402 3 221 1.7E-54 T 23-04-2016 UPTC3659_RS06625 aeaba978d934b3ba2c9973113a15c161 221 SMART SM00862 149 220 4.0E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 SUPERFAMILY SSF53623 57 271 3.92E-55 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 62 85 - T 23-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 PANTHER PTHR23135:SF4 28 425 4.3E-123 T 23-04-2016 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 423 27.146 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 PANTHER PTHR23135 28 425 4.3E-123 T 23-04-2016 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 Pfam PF08245 Mur ligase middle domain 64 256 3.0E-40 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 Pfam PF02875 Mur ligase family, glutamate ligase domain 279 354 5.9E-19 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 Gene3D G3DSA:3.90.190.20 282 417 2.8E-46 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 50 423 9.1E-124 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 SUPERFAMILY SSF53244 278 425 1.16E-41 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS00635 06bc10cc8edcfdc3388ba953bb54ec45 427 Gene3D G3DSA:3.40.1190.10 57 281 8.2E-55 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 PANTHER PTHR30218:SF0 5 693 1.3E-276 T 23-04-2016 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 SUPERFAMILY SSF140356 5 108 4.97E-32 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 Gene3D G3DSA:3.30.870.10 310 493 1.7E-67 T 23-04-2016 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 673 35.474 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 PIRSF PIRSF015589 1 686 4.7E-263 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 Gene3D G3DSA:3.30.1840.10 109 294 3.7E-58 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 PANTHER PTHR30218 5 693 1.3E-276 T 23-04-2016 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 Pfam PF13089 Polyphosphate kinase N-terminal domain 8 111 2.4E-30 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 Pfam PF02503 Polyphosphate kinase middle domain 122 314 1.2E-57 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 SUPERFAMILY SSF56024 495 673 5.38E-62 T 23-04-2016 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 SUPERFAMILY SSF56024 309 491 9.42E-52 T 23-04-2016 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 Pfam PF13090 Polyphosphate kinase C-terminal domain 324 665 3.9E-144 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 SUPERFAMILY SSF143724 110 298 7.65E-56 T 23-04-2016 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 Gene3D G3DSA:3.30.870.10 494 671 1.8E-65 T 23-04-2016 UPTC3659_RS06205 9020ab64f5202611ddec96bfb0b89a41 697 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 8 666 3.2E-236 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 UPTC3659_RS01605 c99d6e18c60a5ef3d394e7f8b514a1fa 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 7 174 2.0E-70 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 UPTC3659_RS01605 c99d6e18c60a5ef3d394e7f8b514a1fa 185 Gene3D G3DSA:2.60.120.10 13 179 1.8E-45 T 23-04-2016 IPR014710 RmlC-like jelly roll fold UPTC3659_RS01605 c99d6e18c60a5ef3d394e7f8b514a1fa 185 SUPERFAMILY SSF51182 12 178 5.04E-45 T 23-04-2016 IPR011051 RmlC-like cupin domain UPTC3659_RS01605 c99d6e18c60a5ef3d394e7f8b514a1fa 185 PANTHER PTHR21047 1 174 2.2E-31 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 UPTC3659_RS01605 c99d6e18c60a5ef3d394e7f8b514a1fa 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 13 178 4.9E-39 T 23-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 UPTC3659_RS08815 46ac4291c6a5e254ceccb612257050d6 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 6.2E-50 T 23-04-2016 IPR007551 Protein of unknown function DUF520 UPTC3659_RS08815 46ac4291c6a5e254ceccb612257050d6 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 23.33 T 23-04-2016 IPR007551 Protein of unknown function DUF520 UPTC3659_RS08815 46ac4291c6a5e254ceccb612257050d6 163 PANTHER PTHR30476 3 161 2.4E-46 T 23-04-2016 UPTC3659_RS08815 46ac4291c6a5e254ceccb612257050d6 163 Gene3D G3DSA:3.30.70.990 12 97 1.4E-24 T 23-04-2016 UPTC3659_RS08815 46ac4291c6a5e254ceccb612257050d6 163 Gene3D G3DSA:3.30.70.860 98 163 1.5E-24 T 23-04-2016 UPTC3659_RS08815 46ac4291c6a5e254ceccb612257050d6 163 SUPERFAMILY SSF89963 5 82 3.92E-24 T 23-04-2016 IPR007551 Protein of unknown function DUF520 UPTC3659_RS08815 46ac4291c6a5e254ceccb612257050d6 163 PANTHER PTHR30476:SF0 3 161 2.4E-46 T 23-04-2016 UPTC3659_RS08815 46ac4291c6a5e254ceccb612257050d6 163 SUPERFAMILY SSF89963 93 163 1.54E-21 T 23-04-2016 IPR007551 Protein of unknown function DUF520 UPTC3659_RS07240 a0b354dce2128623ee71cf96045e272e 181 Gene3D G3DSA:3.40.30.10 3 180 5.9E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS07240 a0b354dce2128623ee71cf96045e272e 181 SUPERFAMILY SSF52833 5 178 9.8E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS07240 a0b354dce2128623ee71cf96045e272e 181 Pfam PF13905 Thioredoxin-like 72 158 1.2E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS08300 4c6a2c75b8cfb505aeef55ffbfba09b0 263 SUPERFAMILY SSF143243 49 205 6.28E-46 T 23-04-2016 UPTC3659_RS08300 4c6a2c75b8cfb505aeef55ffbfba09b0 263 PANTHER PTHR10884 61 176 1.1E-40 T 23-04-2016 UPTC3659_RS08300 4c6a2c75b8cfb505aeef55ffbfba09b0 263 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 139 160 - T 23-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 UPTC3659_RS08300 4c6a2c75b8cfb505aeef55ffbfba09b0 263 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 62 179 1.2E-35 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 UPTC3659_RS08300 4c6a2c75b8cfb505aeef55ffbfba09b0 263 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 60 177 1.7E-40 T 23-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 UPTC3659_RS08300 4c6a2c75b8cfb505aeef55ffbfba09b0 263 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 107 167 2.0E-29 T 23-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 Gene3D G3DSA:3.30.1360.10 10 51 5.5E-23 T 23-04-2016 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 Gene3D G3DSA:3.30.1360.10 173 226 5.5E-23 T 23-04-2016 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 SUPERFAMILY SSF55257 9 53 2.22E-21 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 SUPERFAMILY SSF55257 174 226 2.22E-21 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 SUPERFAMILY SSF47789 250 314 4.05E-19 T 23-04-2016 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 244 305 2.7E-21 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 SMART SM00662 23 229 8.3E-62 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 Gene3D G3DSA:1.10.150.20 249 314 6.9E-21 T 23-04-2016 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 295 1.0E-14 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 Gene3D G3DSA:2.170.120.12 53 172 1.9E-32 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 SUPERFAMILY SSF56553 53 173 6.41E-30 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 155 1.6E-17 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 PANTHER PTHR32108 11 327 9.7E-66 T 23-04-2016 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 222 3.5E-13 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 314 28.591 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 312 1.2E-88 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS00570 d0c60fd3181f6d5e86755de0a33b6feb 337 PANTHER PTHR32108:SF0 11 327 9.7E-66 T 23-04-2016 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 Pfam PF00814 Glycoprotease family 29 304 6.9E-73 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 PANTHER PTHR11735 4 324 1.4E-93 T 23-04-2016 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 PANTHER PTHR11735:SF6 4 324 1.4E-93 T 23-04-2016 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 Gene3D G3DSA:3.30.420.40 4 142 6.8E-28 T 23-04-2016 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 SUPERFAMILY SSF53067 4 306 3.02E-26 T 23-04-2016 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 129 141 5.2E-35 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 6 19 5.2E-35 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 75 95 5.2E-35 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 96 115 5.2E-35 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 261 270 5.2E-35 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 152 173 5.2E-35 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 3 332 53.45 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 6 304 9.0E-100 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS08730 a9c72462143c001b52a6ee4dae7307db 335 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 5 311 8.8E-103 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 UPTC3659_RS07015 2696e1ee153f6f1288b79e42e041f23c 192 Gene3D G3DSA:3.40.225.10 9 188 6.4E-16 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal UPTC3659_RS07015 2696e1ee153f6f1288b79e42e041f23c 192 SMART SM01007 8 185 9.2E-10 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal UPTC3659_RS07015 2696e1ee153f6f1288b79e42e041f23c 192 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 14 183 2.9E-17 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal UPTC3659_RS07015 2696e1ee153f6f1288b79e42e041f23c 192 SUPERFAMILY SSF53639 4 188 3.73E-29 T 23-04-2016 IPR001303 Class II aldolase/adducin N-terminal UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PANTHER PTHR30381:SF1 1 348 4.2E-105 T 23-04-2016 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 Pfam PF02119 Flagellar P-ring protein 19 347 1.3E-114 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PRINTS PR01010 Flagellar P-ring protein signature 241 253 1.2E-77 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PRINTS PR01010 Flagellar P-ring protein signature 99 116 1.2E-77 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PRINTS PR01010 Flagellar P-ring protein signature 116 134 1.2E-77 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PRINTS PR01010 Flagellar P-ring protein signature 153 171 1.2E-77 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PRINTS PR01010 Flagellar P-ring protein signature 33 48 1.2E-77 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PRINTS PR01010 Flagellar P-ring protein signature 77 96 1.2E-77 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PRINTS PR01010 Flagellar P-ring protein signature 52 67 1.2E-77 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PRINTS PR01010 Flagellar P-ring protein signature 18 33 1.2E-77 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PRINTS PR01010 Flagellar P-ring protein signature 179 197 1.2E-77 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 348 35.679 T 23-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 UPTC3659_RS02095 bf74d2cb3d59d37bfcec6442acec905f 348 PANTHER PTHR30381 1 348 4.2E-105 T 23-04-2016 UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 Gene3D G3DSA:1.10.645.10 1 553 9.3E-193 T 23-04-2016 IPR029014 NiFe hydrogenase-like UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 PANTHER PTHR11993:SF11 1 117 2.1E-164 T 23-04-2016 UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 PANTHER PTHR11993:SF11 359 557 2.1E-164 T 23-04-2016 UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 PANTHER PTHR11993:SF11 188 252 2.1E-164 T 23-04-2016 UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 544 553 - T 23-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 Pfam PF00374 Nickel-dependent hydrogenase 40 553 2.4E-206 T 23-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 SUPERFAMILY SSF56762 1 553 1.96E-163 T 23-04-2016 IPR029014 NiFe hydrogenase-like UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 40 65 - T 23-04-2016 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 PANTHER PTHR11993 1 117 2.1E-164 T 23-04-2016 UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 PANTHER PTHR11993 359 557 2.1E-164 T 23-04-2016 UPTC3659_RS04105 fc128088b3e834d63f2c29d77c1cde8e 571 PANTHER PTHR11993 188 252 2.1E-164 T 23-04-2016 UPTC3659_RS04670 6569bd25978d4f10a18d4eab9b0a5b9c 102 Gene3D G3DSA:3.30.70.20 9 58 3.3E-15 T 23-04-2016 UPTC3659_RS04670 6569bd25978d4f10a18d4eab9b0a5b9c 102 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 16 27 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS04670 6569bd25978d4f10a18d4eab9b0a5b9c 102 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS04670 6569bd25978d4f10a18d4eab9b0a5b9c 102 Pfam PF12838 4Fe-4S dicluster domain 15 64 1.3E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS04670 6569bd25978d4f10a18d4eab9b0a5b9c 102 Gene3D G3DSA:3.30.70.20 59 97 1.6E-5 T 23-04-2016 UPTC3659_RS04670 6569bd25978d4f10a18d4eab9b0a5b9c 102 SUPERFAMILY SSF54862 7 83 6.91E-18 T 23-04-2016 UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 SUPERFAMILY SSF55874 271 405 2.23E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 Gene3D G3DSA:1.10.287.130 198 256 6.3E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 398 2.4E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 PANTHER PTHR24423 36 52 9.7E-17 T 23-04-2016 UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 PANTHER PTHR24423 147 398 9.7E-17 T 23-04-2016 UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 Gene3D G3DSA:3.30.565.10 295 405 2.4E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 SMART SM00387 308 410 1.4E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 SUPERFAMILY SSF47384 198 255 1.55E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 PANTHER PTHR24423:SF546 36 52 9.7E-17 T 23-04-2016 UPTC3659_RS02630 0dd5783d9802d3a90df6b3fa349e2b51 410 PANTHER PTHR24423:SF546 147 398 9.7E-17 T 23-04-2016 UPTC3659_RS01195 6579cc820360dfbf0755cf1e95a9538b 120 Pfam PF02033 Ribosome-binding factor A 8 110 1.3E-12 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 UPTC3659_RS01195 6579cc820360dfbf0755cf1e95a9538b 120 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 116 1.7E-16 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 UPTC3659_RS01195 6579cc820360dfbf0755cf1e95a9538b 120 Gene3D G3DSA:3.30.300.20 6 118 1.1E-15 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta UPTC3659_RS01195 6579cc820360dfbf0755cf1e95a9538b 120 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 23-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 UPTC3659_RS01195 6579cc820360dfbf0755cf1e95a9538b 120 SUPERFAMILY SSF89919 7 101 1.16E-14 T 23-04-2016 IPR023799 Ribosome-binding factor A domain UPTC3659_RS04215 fe281b6e725ef0cc9c1653382d23d7d0 355 Pfam PF00589 Phage integrase family 167 337 7.6E-34 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UPTC3659_RS04215 fe281b6e725ef0cc9c1653382d23d7d0 355 PANTHER PTHR30349:SF5 73 354 3.1E-39 T 23-04-2016 UPTC3659_RS04215 fe281b6e725ef0cc9c1653382d23d7d0 355 PANTHER PTHR30349 73 354 3.1E-39 T 23-04-2016 UPTC3659_RS04215 fe281b6e725ef0cc9c1653382d23d7d0 355 Gene3D G3DSA:1.10.443.10 167 342 1.4E-45 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 UPTC3659_RS04215 fe281b6e725ef0cc9c1653382d23d7d0 355 SUPERFAMILY SSF56349 163 346 2.91E-44 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UPTC3659_RS04740 7ad4c10d3788ec8dfba81c63fbdf9145 151 Pfam PF01764 Lipase (class 3) 97 145 1.3E-6 T 23-04-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: REACT_14797|Reactome: REACT_604 UPTC3659_RS04740 7ad4c10d3788ec8dfba81c63fbdf9145 151 Gene3D G3DSA:3.40.50.1820 26 147 1.7E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS04740 7ad4c10d3788ec8dfba81c63fbdf9145 151 SUPERFAMILY SSF53474 8 141 1.29E-13 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS08340 3c2862ec79ff6bc1932c13929a0dbf87 647 PANTHER PTHR30047:SF2 1 646 2.6E-220 T 23-04-2016 UPTC3659_RS08340 3c2862ec79ff6bc1932c13929a0dbf87 647 ProSitePatterns PS01303 BCCT family of transporters signature. 306 315 - T 23-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08340 3c2862ec79ff6bc1932c13929a0dbf87 647 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 48 482 1.0E-146 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08340 3c2862ec79ff6bc1932c13929a0dbf87 647 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 10 480 2.6E-162 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08340 3c2862ec79ff6bc1932c13929a0dbf87 647 PANTHER PTHR30047 1 646 2.6E-220 T 23-04-2016 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 58 107 8.0E-23 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 SUPERFAMILY SSF101386 118 206 3.55E-23 T 23-04-2016 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 PANTHER PTHR21256 1 207 2.1E-95 T 23-04-2016 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 10 207 35.764 T 23-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 202 3.7E-30 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 PANTHER PTHR21256:SF16 1 207 2.1E-95 T 23-04-2016 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 120 206 4.2E-16 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 116 202 19.138 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 35 107 1.7E-29 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 UPTC3659_RS00610 3f2bee6e6759efa661d8988a70522651 208 SUPERFAMILY SSF141734 7 119 2.75E-43 T 23-04-2016 UPTC3659_RS08505 2227c3f178751c7bf8c0e286dbc2aa66 384 PANTHER PTHR30341 3 383 7.4E-137 T 23-04-2016 UPTC3659_RS08505 2227c3f178751c7bf8c0e286dbc2aa66 384 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 6 384 21.464 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 UPTC3659_RS08505 2227c3f178751c7bf8c0e286dbc2aa66 384 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 9 380 1.9E-124 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 UPTC3659_RS08505 2227c3f178751c7bf8c0e286dbc2aa66 384 Pfam PF06965 Na+/H+ antiporter 1 8 380 5.2E-132 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 UPTC3659_RS08505 2227c3f178751c7bf8c0e286dbc2aa66 384 PANTHER PTHR30341:SF0 3 383 7.4E-137 T 23-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 UPTC3659_RS08505 2227c3f178751c7bf8c0e286dbc2aa66 384 Gene3D G3DSA:1.20.1530.10 5 382 4.7E-138 T 23-04-2016 IPR023171 Na/H antiporter domain UPTC3659_RS00445 5dcf794df4438631901cc9104e322de8 181 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 40.273 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00445 5dcf794df4438631901cc9104e322de8 181 PANTHER PTHR11994 1 179 3.2E-73 T 23-04-2016 UPTC3659_RS00445 5dcf794df4438631901cc9104e322de8 181 Gene3D G3DSA:3.30.1440.10 2 178 3.4E-68 T 23-04-2016 IPR022803 Ribosomal protein L5 domain UPTC3659_RS00445 5dcf794df4438631901cc9104e322de8 181 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.1E-37 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal UPTC3659_RS00445 5dcf794df4438631901cc9104e322de8 181 Pfam PF00281 Ribosomal protein L5 24 80 9.9E-21 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal UPTC3659_RS00445 5dcf794df4438631901cc9104e322de8 181 PIRSF PIRSF002161 1 181 1.9E-63 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00445 5dcf794df4438631901cc9104e322de8 181 SUPERFAMILY SSF55282 1 178 2.59E-69 T 23-04-2016 IPR022803 Ribosomal protein L5 domain UPTC3659_RS00445 5dcf794df4438631901cc9104e322de8 181 PANTHER PTHR11994:SF4 1 179 3.2E-73 T 23-04-2016 UPTC3659_RS00445 5dcf794df4438631901cc9104e322de8 181 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00090 1f3bd682f0571a446553283c916d9c9c 523 PANTHER PTHR30255 25 521 2.6E-141 T 23-04-2016 UPTC3659_RS00090 1f3bd682f0571a446553283c916d9c9c 523 Pfam PF02272 DHHA1 domain 337 394 2.4E-8 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 UPTC3659_RS00090 1f3bd682f0571a446553283c916d9c9c 523 Pfam PF01368 DHH family 53 179 7.0E-11 T 23-04-2016 IPR001667 DDH domain UPTC3659_RS00090 1f3bd682f0571a446553283c916d9c9c 523 PANTHER PTHR30255:SF2 25 521 2.6E-141 T 23-04-2016 UPTC3659_RS00090 1f3bd682f0571a446553283c916d9c9c 523 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 5 521 3.6E-157 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 UPTC3659_RS00090 1f3bd682f0571a446553283c916d9c9c 523 SUPERFAMILY SSF64182 26 409 3.14E-103 T 23-04-2016 UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 SUPERFAMILY SSF81901 22 202 2.53E-50 T 23-04-2016 UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 PANTHER PTHR11102 17 204 1.0E-43 T 23-04-2016 UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 Gene3D G3DSA:1.25.40.10 28 117 7.4E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 Gene3D G3DSA:1.25.40.10 118 202 2.4E-27 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 SMART SM00671 51 86 4.0E-9 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 SMART SM00671 159 194 6.8E-10 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 SMART SM00671 87 122 4.3E-8 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 SMART SM00671 123 158 3.8E-10 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 SMART SM00671 16 50 100.0 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 Pfam PF08238 Sel1 repeat 126 158 1.3E-7 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 Pfam PF08238 Sel1 repeat 88 118 3.4E-5 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 Pfam PF08238 Sel1 repeat 162 193 4.8E-7 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 Pfam PF08238 Sel1 repeat 56 86 7.8E-6 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS08015 e9ed336173f811cb4cc512592174720a 206 Pfam PF13181 Tetratricopeptide repeat 31 49 0.1 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS00550 949c7a100e7ddc1811500724b79287e6 37 SUPERFAMILY SSF57840 1 37 8.11E-17 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00550 949c7a100e7ddc1811500724b79287e6 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00550 949c7a100e7ddc1811500724b79287e6 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.9E-23 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00550 949c7a100e7ddc1811500724b79287e6 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.727 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00550 949c7a100e7ddc1811500724b79287e6 37 PANTHER PTHR18804 1 37 3.4E-18 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00550 949c7a100e7ddc1811500724b79287e6 37 Pfam PF00444 Ribosomal protein L36 1 37 1.4E-20 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS03160 763b369a61476c016c8b4c6a5ca175c6 247 Gene3D G3DSA:3.40.190.10 205 244 1.1E-39 T 23-04-2016 UPTC3659_RS03160 763b369a61476c016c8b4c6a5ca175c6 247 Gene3D G3DSA:3.40.190.10 26 114 1.1E-39 T 23-04-2016 UPTC3659_RS03160 763b369a61476c016c8b4c6a5ca175c6 247 SMART SM00062 29 247 3.9E-60 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UPTC3659_RS03160 763b369a61476c016c8b4c6a5ca175c6 247 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 243 1.2E-55 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UPTC3659_RS03160 763b369a61476c016c8b4c6a5ca175c6 247 PANTHER PTHR18966 26 238 1.1E-34 T 23-04-2016 UPTC3659_RS03160 763b369a61476c016c8b4c6a5ca175c6 247 Gene3D G3DSA:3.40.190.10 117 194 3.7E-15 T 23-04-2016 UPTC3659_RS03160 763b369a61476c016c8b4c6a5ca175c6 247 SUPERFAMILY SSF53850 1 246 5.59E-60 T 23-04-2016 UPTC3659_RS03160 763b369a61476c016c8b4c6a5ca175c6 247 PANTHER PTHR18966:SF191 26 238 1.1E-34 T 23-04-2016 UPTC3659_RS01505 c2c781c65310d1d495ae023bb030cdd2 446 PANTHER PTHR16943:SF8 7 443 2.1E-96 T 23-04-2016 UPTC3659_RS01505 c2c781c65310d1d495ae023bb030cdd2 446 Pfam PF03972 MmgE/PrpD family 5 436 4.9E-106 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 UPTC3659_RS01505 c2c781c65310d1d495ae023bb030cdd2 446 SUPERFAMILY SSF103378 3 445 1.7E-114 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 UPTC3659_RS01505 c2c781c65310d1d495ae023bb030cdd2 446 Gene3D G3DSA:3.30.1330.120 267 406 3.3E-21 T 23-04-2016 UPTC3659_RS01505 c2c781c65310d1d495ae023bb030cdd2 446 PANTHER PTHR16943 7 443 2.1E-96 T 23-04-2016 IPR005656 MmgE/PrpD GO:0016829 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 Gene3D G3DSA:2.30.30.30 6 64 9.6E-28 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 Gene3D G3DSA:2.40.50.140 66 129 1.6E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 SMART SM00841 131 186 4.0E-27 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 Gene3D G3DSA:2.40.50.140 131 187 4.4E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 PIRSF PIRSF005901 2 188 3.3E-63 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 1.8E-74 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 SMART SM01185 69 123 2.8E-27 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 2.5E-22 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 Pfam PF09285 Elongation factor P, C-terminal 132 186 3.6E-20 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 SUPERFAMILY SSF50249 131 187 6.85E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 SUPERFAMILY SSF50104 2 65 4.36E-21 T 23-04-2016 IPR008991 Translation protein SH3-like domain UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 6.3E-24 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 SUPERFAMILY SSF50249 67 128 4.71E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 PANTHER PTHR30053 1 188 5.5E-78 T 23-04-2016 UPTC3659_RS07115 111970e9a11178b50fff33b6b7e09e01 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 46.841 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 UPTC3659_RS03765 52b587bb8f23f73132111d5b999e0b53 162 Pfam PF08282 haloacid dehalogenase-like hydrolase 68 127 4.7E-9 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS03765 52b587bb8f23f73132111d5b999e0b53 162 PANTHER PTHR21485 2 153 4.8E-31 T 23-04-2016 UPTC3659_RS03765 52b587bb8f23f73132111d5b999e0b53 162 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 152 7.7E-65 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 UPTC3659_RS03765 52b587bb8f23f73132111d5b999e0b53 162 PANTHER PTHR21485:SF3 2 153 4.8E-31 T 23-04-2016 UPTC3659_RS03765 52b587bb8f23f73132111d5b999e0b53 162 SUPERFAMILY SSF56784 1 152 1.18E-34 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS03765 52b587bb8f23f73132111d5b999e0b53 162 PIRSF PIRSF006118 1 162 1.1E-56 T 23-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 UPTC3659_RS03765 52b587bb8f23f73132111d5b999e0b53 162 Gene3D G3DSA:3.40.50.1000 1 153 2.1E-35 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 148 4.1E-25 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 144 4.7E-43 T 23-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 SUPERFAMILY SSF56784 1 157 1.05E-37 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 PANTHER PTHR23133:SF2 10 97 1.4E-142 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 PANTHER PTHR23133:SF2 163 355 1.4E-142 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 PANTHER PTHR23133 10 97 1.4E-142 T 23-04-2016 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 PANTHER PTHR23133 163 355 1.4E-142 T 23-04-2016 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 33.977 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 162 2.6E-80 T 23-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 SUPERFAMILY SSF54211 167 250 3.16E-28 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 Gene3D G3DSA:3.40.50.1000 1 166 3.8E-41 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 SUPERFAMILY SSF54211 252 342 8.98E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 Gene3D G3DSA:3.30.230.40 258 355 4.0E-29 T 23-04-2016 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 Gene3D G3DSA:3.30.230.40 167 253 2.6E-35 T 23-04-2016 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 53.486 T 23-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 Pfam PF08645 Polynucleotide kinase 3 phosphatase 4 131 3.5E-8 T 23-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 UPTC3659_RS00590 c30e687a1fef1a6cf84668b871fa4940 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.5E-61 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 UPTC3659_RS06560 dff66408dfcde393f66f1e54c4c37f00 256 Pfam PF01311 Bacterial export proteins, family 1 13 242 3.8E-62 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UPTC3659_RS06560 dff66408dfcde393f66f1e54c4c37f00 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 200 219 1.1E-23 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UPTC3659_RS06560 dff66408dfcde393f66f1e54c4c37f00 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 78 97 1.1E-23 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UPTC3659_RS06560 dff66408dfcde393f66f1e54c4c37f00 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.1E-23 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UPTC3659_RS06560 dff66408dfcde393f66f1e54c4c37f00 256 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 178 200 1.1E-23 T 23-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UPTC3659_RS06560 dff66408dfcde393f66f1e54c4c37f00 256 PANTHER PTHR30065:SF1 1 256 1.7E-60 T 23-04-2016 UPTC3659_RS06560 dff66408dfcde393f66f1e54c4c37f00 256 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 251 3.7E-73 T 23-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 UPTC3659_RS06560 dff66408dfcde393f66f1e54c4c37f00 256 PANTHER PTHR30065 1 256 1.7E-60 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 Pfam PF00344 SecY translocase 62 400 7.5E-100 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 Gene3D G3DSA:1.10.3370.10 3 415 3.7E-135 T 23-04-2016 IPR023201 SecY subunit domain UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 167 190 1.5E-86 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 9 27 1.5E-86 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 101 124 1.5E-86 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 61 81 1.5E-86 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 141 166 1.5E-86 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 385 403 1.5E-86 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 259 278 1.5E-86 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 353 371 1.5E-86 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PRINTS PR00303 Preprotein translocase SecY subunit signature 298 320 1.5E-86 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 SUPERFAMILY SSF103491 3 407 3.66E-110 T 23-04-2016 IPR023201 SecY subunit domain UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PIRSF PIRSF004557 1 419 1.0E-119 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 ProSitePatterns PS00756 Protein secY signature 2. 160 177 - T 23-04-2016 IPR030659 SecY conserved site UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PANTHER PTHR10906 5 413 5.4E-148 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 7 411 4.7E-108 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 PANTHER PTHR10906:SF2 5 413 5.4E-148 T 23-04-2016 UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 ProSitePatterns PS00755 Protein secY signature 1. 62 81 - T 23-04-2016 IPR030659 SecY conserved site UPTC3659_RS00480 33bffed6f978569eacd816ddee3d81c1 420 Hamap MF_01465 Protein translocase subunit SecY [secY]. 1 416 27.119 T 23-04-2016 IPR026593 Protein translocase subunit SecY UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 Pfam PF00406 Adenylate kinase 7 163 7.1E-38 T 23-04-2016 UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 SUPERFAMILY SSF52540 2 189 4.93E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 Gene3D G3DSA:3.40.50.300 4 187 5.9E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 Hamap MF_00235 Adenylate kinase [adk]. 3 186 35.672 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 PRINTS PR00094 Adenylate kinase signature 133 148 2.8E-24 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 PRINTS PR00094 Adenylate kinase signature 83 99 2.8E-24 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 PRINTS PR00094 Adenylate kinase signature 6 19 2.8E-24 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 PRINTS PR00094 Adenylate kinase signature 35 49 2.8E-24 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 PRINTS PR00094 Adenylate kinase signature 150 164 2.8E-24 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 PANTHER PTHR23359 6 189 5.5E-49 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 UPTC3659_RS03725 254f660d2fd703a7ba9f663a27792d78 190 ProSitePatterns PS00113 Adenylate kinase signature. 83 94 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 UPTC3659_RS07990 146fc3ae9ff2bd6a46fb0a47885163b4 149 Gene3D G3DSA:3.40.630.30 2 148 6.2E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS07990 146fc3ae9ff2bd6a46fb0a47885163b4 149 SUPERFAMILY SSF55729 2 129 1.92E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS07990 146fc3ae9ff2bd6a46fb0a47885163b4 149 Pfam PF13673 Acetyltransferase (GNAT) domain 26 129 3.2E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 UPTC3659_RS04300 7bfd9f463d8f219ae185ae017a502247 192 Pfam PF02441 Flavoprotein 3 134 3.1E-23 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 UPTC3659_RS04300 7bfd9f463d8f219ae185ae017a502247 192 Gene3D G3DSA:3.40.50.1950 2 192 1.4E-61 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 UPTC3659_RS04300 7bfd9f463d8f219ae185ae017a502247 192 PANTHER PTHR30108 1 192 5.7E-48 T 23-04-2016 UPTC3659_RS04300 7bfd9f463d8f219ae185ae017a502247 192 PANTHER PTHR30108:SF2 1 192 5.7E-48 T 23-04-2016 UPTC3659_RS04300 7bfd9f463d8f219ae185ae017a502247 192 SUPERFAMILY SSF52507 2 192 2.88E-46 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 UPTC3659_RS04300 7bfd9f463d8f219ae185ae017a502247 192 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 191 7.2E-44 T 23-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Pfam PF11987 Translation-initiation factor 2 663 767 3.7E-37 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Pfam PF03144 Elongation factor Tu domain 2 798 864 3.4E-7 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Gene3D G3DSA:3.40.50.300 366 535 1.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Gene3D G3DSA:2.40.30.10 547 640 1.9E-19 T 23-04-2016 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 SUPERFAMILY SSF52156 654 784 1.22E-34 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 PANTHER PTHR23115 361 704 4.9E-190 T 23-04-2016 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 PANTHER PTHR23115 730 877 4.9E-190 T 23-04-2016 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 SUPERFAMILY SSF50447 549 631 4.78E-20 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 SUPERFAMILY SSF50447 779 872 2.16E-30 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 294 874 2.3E-256 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 298 349 4.2E-15 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.2E-10 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 PANTHER PTHR23115:SF184 361 704 4.9E-190 T 23-04-2016 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 PANTHER PTHR23115:SF184 730 877 4.9E-190 T 23-04-2016 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 875 16.822 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Gene3D G3DSA:2.40.30.10 780 874 2.6E-36 T 23-04-2016 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Gene3D G3DSA:3.40.50.10050 677 756 9.8E-26 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 SUPERFAMILY SSF52540 359 548 4.32E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 ProSitePatterns PS01176 Initiation factor 2 signature. 828 850 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 379 535 2.1E-36 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS01190 ed6e364e4d9fdceae9ec7d93dfede40d 877 Pfam PF00009 Elongation factor Tu GTP binding domain 380 536 1.1E-34 T 23-04-2016 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 Gene3D G3DSA:2.30.42.10 385 467 9.4E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 Pfam PF13180 PDZ domain 281 366 7.2E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 Gene3D G3DSA:2.40.10.10 169 281 7.5E-43 T 23-04-2016 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PANTHER PTHR22939 42 64 5.5E-107 T 23-04-2016 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PANTHER PTHR22939 88 361 5.5E-107 T 23-04-2016 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 SUPERFAMILY SSF50156 385 468 4.99E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 SUPERFAMILY SSF50494 41 272 1.19E-63 T 23-04-2016 IPR009003 Peptidase S1, PA clan UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 Gene3D G3DSA:2.40.10.10 43 167 6.2E-37 T 23-04-2016 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 SMART SM00228 382 465 1.1E-4 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 SMART SM00228 280 360 9.5E-9 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PANTHER PTHR22939:SF93 42 64 5.5E-107 T 23-04-2016 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PANTHER PTHR22939:SF93 88 361 5.5E-107 T 23-04-2016 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 SUPERFAMILY SSF50156 262 367 8.54E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 382 458 1.3E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 43 467 1.9E-146 T 23-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 Gene3D G3DSA:2.30.42.10 282 373 1.7E-21 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 9.1E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PRINTS PR00834 HtrA/DegQ protease family signature 318 330 9.1E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 9.1E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PRINTS PR00834 HtrA/DegQ protease family signature 115 127 9.1E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 9.1E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 9.1E-53 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UPTC3659_RS04480 57f6d980dfb6ce13a6e2e5e739a5653e 472 Pfam PF13365 Trypsin-like peptidase domain 106 241 5.2E-34 T 23-04-2016 UPTC3659_RS00970 d4ef433ff45de80378dfcc9bcd8f7192 224 Pfam PF00072 Response regulator receiver domain 3 113 4.0E-17 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS00970 d4ef433ff45de80378dfcc9bcd8f7192 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 217 5.1E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS00970 d4ef433ff45de80378dfcc9bcd8f7192 224 Gene3D G3DSA:1.10.10.10 121 217 2.1E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS00970 d4ef433ff45de80378dfcc9bcd8f7192 224 SMART SM00448 1 112 1.4E-16 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS00970 d4ef433ff45de80378dfcc9bcd8f7192 224 SUPERFAMILY SSF52172 1 172 1.24E-24 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS00970 d4ef433ff45de80378dfcc9bcd8f7192 224 SMART SM00862 142 217 1.2E-19 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS00970 d4ef433ff45de80378dfcc9bcd8f7192 224 Gene3D G3DSA:3.40.50.2300 1 117 7.2E-26 T 23-04-2016 UPTC3659_RS00970 d4ef433ff45de80378dfcc9bcd8f7192 224 PANTHER PTHR26402:SF578 1 217 3.9E-48 T 23-04-2016 UPTC3659_RS00970 d4ef433ff45de80378dfcc9bcd8f7192 224 PANTHER PTHR26402 1 217 3.9E-48 T 23-04-2016 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 Pfam PF01842 ACT domain 456 516 1.7E-6 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 315 8.2E-32 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 SUPERFAMILY SSF143548 322 449 2.88E-30 T 23-04-2016 IPR029009 Allosteric substrate binding domain UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 SUPERFAMILY SSF51735 101 284 1.62E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 PANTHER PTHR10996 1 359 5.8E-138 T 23-04-2016 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 145 172 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 Gene3D G3DSA:3.40.50.720 107 284 4.4E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 Gene3D G3DSA:3.40.50.720 1 106 6.9E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 Gene3D G3DSA:3.30.70.260 448 522 2.8E-18 T 23-04-2016 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 SUPERFAMILY SSF55021 443 519 4.01E-14 T 23-04-2016 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 524 3.1E-181 T 23-04-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 Gene3D G3DSA:3.30.1330.90 322 447 1.4E-36 T 23-04-2016 IPR029009 Allosteric substrate binding domain UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 PANTHER PTHR10996:SF20 1 359 5.8E-138 T 23-04-2016 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 SUPERFAMILY SSF52283 20 120 6.8E-30 T 23-04-2016 UPTC3659_RS07120 74041539ad7a1e6f97c21ce775443722 526 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 283 4.4E-55 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 UPTC3659_RS03975 b78e9d4ee9f0733ccafd1ab31adb2a81 215 PANTHER PTHR30614 1 212 5.7E-66 T 23-04-2016 UPTC3659_RS03975 b78e9d4ee9f0733ccafd1ab31adb2a81 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 213 3.2E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03975 b78e9d4ee9f0733ccafd1ab31adb2a81 215 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 6.6E-28 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 UPTC3659_RS03975 b78e9d4ee9f0733ccafd1ab31adb2a81 215 SUPERFAMILY SSF161098 10 198 5.49E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03975 b78e9d4ee9f0733ccafd1ab31adb2a81 215 Gene3D G3DSA:1.10.3720.10 10 213 1.2E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS00880 caec22aa605d980b7b59684c5edf6174 392 Pfam PF00999 Sodium/hydrogen exchanger family 19 383 2.8E-41 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 UPTC3659_RS00880 caec22aa605d980b7b59684c5edf6174 392 PANTHER PTHR32468 27 379 1.6E-39 T 23-04-2016 UPTC3659_RS00880 caec22aa605d980b7b59684c5edf6174 392 PANTHER PTHR32468:SF9 27 379 1.6E-39 T 23-04-2016 UPTC3659_RS03900 b77aedba3e8b6f2798f00add6ff39f36 1135 SUPERFAMILY SSF51126 46 263 5.34E-17 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor UPTC3659_RS03900 b77aedba3e8b6f2798f00add6ff39f36 1135 Pfam PF05860 haemagglutination activity domain 30 138 4.7E-14 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS03900 b77aedba3e8b6f2798f00add6ff39f36 1135 SMART SM00912 27 140 1.1E-14 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS03900 b77aedba3e8b6f2798f00add6ff39f36 1135 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 68 135 5.5E-13 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS00685 996d54d7769afbea4857f9dfa87e7bab 179 SUPERFAMILY SSF49329 33 178 2.88E-43 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00685 996d54d7769afbea4857f9dfa87e7bab 179 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 44 178 1.5E-27 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00685 996d54d7769afbea4857f9dfa87e7bab 179 PANTHER PTHR10003:SF40 48 178 2.9E-31 T 23-04-2016 UPTC3659_RS00685 996d54d7769afbea4857f9dfa87e7bab 179 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 167 178 - T 23-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS00685 996d54d7769afbea4857f9dfa87e7bab 179 PANTHER PTHR10003 48 178 2.9E-31 T 23-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 UPTC3659_RS00685 996d54d7769afbea4857f9dfa87e7bab 179 Gene3D G3DSA:2.60.40.200 37 179 2.8E-40 T 23-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 UPTC3659_RS02060 0f8d0d99e194f842ae27aeae16a85a74 386 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 386 5.9E-9 T 23-04-2016 IPR003004 GspF/PilC family UPTC3659_RS02060 0f8d0d99e194f842ae27aeae16a85a74 386 PRINTS PR00812 Bacterial general secretion pathway protein F signature 351 365 5.9E-9 T 23-04-2016 IPR003004 GspF/PilC family UPTC3659_RS02060 0f8d0d99e194f842ae27aeae16a85a74 386 PRINTS PR00812 Bacterial general secretion pathway protein F signature 152 180 5.9E-9 T 23-04-2016 IPR003004 GspF/PilC family UPTC3659_RS02060 0f8d0d99e194f842ae27aeae16a85a74 386 PANTHER PTHR30012:SF0 3 386 8.0E-50 T 23-04-2016 UPTC3659_RS02060 0f8d0d99e194f842ae27aeae16a85a74 386 Pfam PF00482 Type II secretion system (T2SS), protein F 61 180 1.8E-12 T 23-04-2016 IPR018076 Type II secretion system F domain UPTC3659_RS02060 0f8d0d99e194f842ae27aeae16a85a74 386 Pfam PF00482 Type II secretion system (T2SS), protein F 259 378 5.4E-17 T 23-04-2016 IPR018076 Type II secretion system F domain UPTC3659_RS02060 0f8d0d99e194f842ae27aeae16a85a74 386 PANTHER PTHR30012 3 386 8.0E-50 T 23-04-2016 UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 PANTHER PTHR10381 1 192 1.7E-130 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 91 102 - T 23-04-2016 IPR018215 ClpP, Ser active site UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 Pfam PF00574 Clp protease 13 193 9.1E-88 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 SUPERFAMILY SSF52096 12 192 1.88E-72 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 3 193 3.0E-105 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 23-04-2016 IPR033135 ClpP, histidine active site UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 1.6E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 1.6E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 1.6E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 1.6E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 PRINTS PR00127 Clp protease catalytic subunit P signature 20 35 1.6E-53 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 194 43.511 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UPTC3659_RS08455 7ce96e7391775033051277ca1ae4b580 196 Gene3D G3DSA:3.90.226.10 4 193 1.7E-89 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 SMART SM00788 4 415 3.1E-251 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 SUPERFAMILY SSF52540 3 415 1.7E-157 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 Gene3D G3DSA:1.10.300.10 98 191 4.5E-27 T 23-04-2016 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 416 178.405 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 PANTHER PTHR11846 1 416 2.4E-209 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 129 140 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 Gene3D G3DSA:3.40.440.10 192 261 3.9E-69 T 23-04-2016 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 Gene3D G3DSA:3.40.440.10 3 94 3.9E-69 T 23-04-2016 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 Pfam PF00709 Adenylosuccinate synthetase 6 414 4.2E-162 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 Gene3D G3DSA:3.90.170.10 262 416 3.4E-61 T 23-04-2016 UPTC3659_RS01930 2d9fe8fd62afff5921a2f8c5b62bb1cd 416 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 416 1.4E-161 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 UPTC3659_RS01250 8501c1f74c9f19c15a78da23853a71b5 287 SUPERFAMILY SSF52540 22 282 2.86E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01250 8501c1f74c9f19c15a78da23853a71b5 287 PANTHER PTHR13696:SF3 25 271 8.7E-53 T 23-04-2016 UPTC3659_RS01250 8501c1f74c9f19c15a78da23853a71b5 287 PIRSF PIRSF003092 1 287 4.4E-69 T 23-04-2016 IPR025501 ATP binding protein MinD UPTC3659_RS01250 8501c1f74c9f19c15a78da23853a71b5 287 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 200 1.0E-27 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain UPTC3659_RS01250 8501c1f74c9f19c15a78da23853a71b5 287 PANTHER PTHR13696 25 271 8.7E-53 T 23-04-2016 UPTC3659_RS01250 8501c1f74c9f19c15a78da23853a71b5 287 Gene3D G3DSA:3.40.50.300 21 260 1.1E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01615 1e78b6735e079ac7b009a597d50cb835 388 PANTHER PTHR30244:SF16 12 217 1.3E-63 T 23-04-2016 UPTC3659_RS01615 1e78b6735e079ac7b009a597d50cb835 388 PANTHER PTHR30244:SF16 236 364 1.3E-63 T 23-04-2016 UPTC3659_RS01615 1e78b6735e079ac7b009a597d50cb835 388 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 366 1.0E-80 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase UPTC3659_RS01615 1e78b6735e079ac7b009a597d50cb835 388 Gene3D G3DSA:3.90.1150.10 264 384 6.8E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS01615 1e78b6735e079ac7b009a597d50cb835 388 SUPERFAMILY SSF53383 9 372 4.44E-92 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS01615 1e78b6735e079ac7b009a597d50cb835 388 PANTHER PTHR30244 12 217 1.3E-63 T 23-04-2016 UPTC3659_RS01615 1e78b6735e079ac7b009a597d50cb835 388 PANTHER PTHR30244 236 364 1.3E-63 T 23-04-2016 UPTC3659_RS01615 1e78b6735e079ac7b009a597d50cb835 388 Gene3D G3DSA:3.40.640.10 5 263 5.4E-73 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS01615 1e78b6735e079ac7b009a597d50cb835 388 PIRSF PIRSF000390 1 388 2.1E-101 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase UPTC3659_RS07310 7781b0c86075b5880da3ade2d3430b95 304 Gene3D G3DSA:3.40.50.2000 138 302 1.2E-47 T 23-04-2016 UPTC3659_RS07310 7781b0c86075b5880da3ade2d3430b95 304 Gene3D G3DSA:3.40.50.2000 1 105 3.9E-14 T 23-04-2016 UPTC3659_RS07310 7781b0c86075b5880da3ade2d3430b95 304 SUPERFAMILY SSF53756 1 303 1.07E-67 T 23-04-2016 UPTC3659_RS07310 7781b0c86075b5880da3ade2d3430b95 304 PANTHER PTHR30160 1 303 1.8E-42 T 23-04-2016 UPTC3659_RS07310 7781b0c86075b5880da3ade2d3430b95 304 PANTHER PTHR30160:SF7 1 303 1.8E-42 T 23-04-2016 UPTC3659_RS07310 7781b0c86075b5880da3ade2d3430b95 304 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 138 301 2.4E-40 T 23-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 UPTC3659_RS07310 7781b0c86075b5880da3ade2d3430b95 304 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 109 284 5.1E-31 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PANTHER PTHR30013:SF7 13 312 2.9E-112 T 23-04-2016 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 71 212 4.5E-29 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 39 321 2.4E-106 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 SUPERFAMILY SSF56770 61 318 7.98E-78 T 23-04-2016 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 Gene3D G3DSA:4.10.480.10 234 318 1.2E-34 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 56 78 1.0E-60 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 291 304 1.0E-60 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 239 257 1.0E-60 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 195 218 1.0E-60 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 167 191 1.0E-60 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 263 289 1.0E-60 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 79 103 1.0E-60 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 221 238 1.0E-60 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 PANTHER PTHR30013 13 312 2.9E-112 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 234 315 5.6E-29 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal UPTC3659_RS02165 f0854d01e1574ef8049351653e6c4c34 544 Gene3D G3DSA:3.40.50.700 60 231 5.3E-46 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 Pfam PF13237 4Fe-4S dicluster domain 196 245 2.3E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 3 253 9.3E-93 T 23-04-2016 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 204 215 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 235 246 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 PANTHER PTHR30176 1 253 7.5E-38 T 23-04-2016 UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 PANTHER PTHR30176:SF2 1 253 7.5E-38 T 23-04-2016 UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 Gene3D G3DSA:3.30.70.20 82 97 8.6E-12 T 23-04-2016 UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 Gene3D G3DSA:3.30.70.20 210 250 8.6E-12 T 23-04-2016 UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 Gene3D G3DSA:3.30.70.20 175 209 3.7E-5 T 23-04-2016 UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 Pfam PF12801 4Fe-4S binding domain 154 191 0.0046 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 Pfam PF12801 4Fe-4S binding domain 60 104 1.9E-12 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 SUPERFAMILY SSF54862 71 93 8.6E-21 T 23-04-2016 UPTC3659_RS06175 a75b9075f3be724b336b1658fe187f03 263 SUPERFAMILY SSF54862 130 252 8.6E-21 T 23-04-2016 UPTC3659_RS08000 4df06eff429b6c340398070d1d4ab460 232 SUPERFAMILY SSF53335 15 194 5.32E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08000 4df06eff429b6c340398070d1d4ab460 232 Gene3D G3DSA:3.40.50.150 6 158 1.5E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08000 4df06eff429b6c340398070d1d4ab460 232 Pfam PF13489 Methyltransferase domain 34 155 3.0E-9 T 23-04-2016 UPTC3659_RS08000 4df06eff429b6c340398070d1d4ab460 232 PANTHER PTHR10108:SF806 4 223 1.3E-13 T 23-04-2016 UPTC3659_RS08000 4df06eff429b6c340398070d1d4ab460 232 PANTHER PTHR10108 4 223 1.3E-13 T 23-04-2016 UPTC3659_RS08000 4df06eff429b6c340398070d1d4ab460 232 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 4 230 3.0E-55 T 23-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 Pfam PF04983 RNA polymerase Rpb1, domain 3 511 653 6.3E-25 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 PANTHER PTHR19376:SF32 1319 1404 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 PANTHER PTHR19376:SF32 8 1114 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 PANTHER PTHR19376:SF32 1445 1505 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 PANTHER PTHR19376:SF32 1218 1300 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 SMART SM00663 257 536 5.0E-174 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 Pfam PF04998 RNA polymerase Rpb1, domain 5 764 1414 3.7E-65 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 Gene3D G3DSA:2.40.50.100 1299 1354 7.5E-8 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 PANTHER PTHR19376 1319 1404 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 PANTHER PTHR19376 8 1114 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 PANTHER PTHR19376 1445 1505 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 PANTHER PTHR19376 1218 1300 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 22 1507 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 Pfam PF05000 RNA polymerase Rpb1, domain 4 682 761 1.1E-16 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 Gene3D G3DSA:2.40.40.20 439 509 1.5E-37 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 Gene3D G3DSA:2.40.40.20 371 398 1.5E-37 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 364 7.1E-81 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 SUPERFAMILY SSF64484 16 942 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 SUPERFAMILY SSF64484 1276 1506 0.0 T 23-04-2016 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 16 1516 10.608 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS02365 a7698308dcdb4fde19ed2d4a039da3bc 1517 Pfam PF00623 RNA polymerase Rpb1, domain 2 366 507 4.3E-36 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 PANTHER PTHR30435 666 790 5.9E-94 T 23-04-2016 UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 PANTHER PTHR30435 1 137 5.9E-94 T 23-04-2016 UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 PANTHER PTHR30435:SF1 666 790 5.9E-94 T 23-04-2016 UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 PANTHER PTHR30435:SF1 1 137 5.9E-94 T 23-04-2016 UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 Pfam PF00460 Flagella basal body rod protein 5 35 3.6E-9 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 712 789 1.2E-19 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 SUPERFAMILY SSF117143 538 751 5.36E-59 T 23-04-2016 UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 SUPERFAMILY SSF117143 91 190 5.36E-59 T 23-04-2016 UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 TIGRFAM TIGR02489 flgE_epsilon: flagellar hook protein FlgE 1 791 4.7E-263 T 23-04-2016 IPR012835 Flagellar hook FlgE GO:0009288|GO:0044781 UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 Pfam PF07559 Flagellar basal body protein FlaE 548 669 5.4E-14 T 23-04-2016 IPR011491 Flagellar hook protein FlgE UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 509 772 8.5E-44 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G UPTC3659_RS00615 62347457ca9e0ad6ee378c6cfab80b2f 791 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 376 5.2E-42 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G UPTC3659_RS04135 36ffe764013ab0c45708c25a5ee30db1 545 PANTHER PTHR21666 352 532 1.1E-18 T 23-04-2016 UPTC3659_RS04135 36ffe764013ab0c45708c25a5ee30db1 545 SUPERFAMILY SSF53955 368 529 2.25E-32 T 23-04-2016 IPR023346 Lysozyme-like domain UPTC3659_RS04135 36ffe764013ab0c45708c25a5ee30db1 545 Gene3D G3DSA:1.10.530.10 365 526 2.1E-29 T 23-04-2016 UPTC3659_RS04135 36ffe764013ab0c45708c25a5ee30db1 545 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 387 415 - T 23-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 UPTC3659_RS04135 36ffe764013ab0c45708c25a5ee30db1 545 Pfam PF01464 Transglycosylase SLT domain 378 478 2.2E-18 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 SUPERFAMILY SSF46785 256 327 9.53E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 325 3.1E-133 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 Gene3D G3DSA:3.40.50.300 20 179 2.6E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 145.257 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 PANTHER PTHR13779:SF25 1 330 1.4E-146 T 23-04-2016 UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 SUPERFAMILY SSF52540 20 250 3.55E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 330 2.0E-38 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 Gene3D G3DSA:1.10.10.10 257 327 2.4E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 7.5E-109 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 PANTHER PTHR13779 1 330 1.4E-146 T 23-04-2016 UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 SMART SM00382 51 184 3.5E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 Gene3D G3DSA:1.10.8.60 183 255 2.4E-25 T 23-04-2016 UPTC3659_RS07505 d986cadebf44715ae691bbc508f4c0c3 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 325 3.7E-24 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 SUPERFAMILY SSF81886 832 844 1.14E-66 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 SUPERFAMILY SSF81886 586 804 1.14E-66 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 SMART SM00957 6 397 9.4E-279 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 512 5.0E-231 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 SUPERFAMILY SSF52540 363 410 1.95E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 SUPERFAMILY SSF52540 5 230 1.95E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Gene3D G3DSA:3.90.1440.10 235 363 1.0E-44 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Gene3D G3DSA:3.40.50.300 413 585 6.4E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 SUPERFAMILY SSF52540 413 584 6.21E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 796 19.77 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Pfam PF07517 SecA DEAD-like domain 7 397 3.6E-130 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Pfam PF02810 SEC-C motif 836 854 3.2E-9 T 23-04-2016 IPR004027 SEC-C motif UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 PANTHER PTHR30612 8 857 0.0 T 23-04-2016 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Pfam PF01043 SecA preprotein cross-linking domain 237 353 3.5E-37 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Pfam PF07516 SecA Wing and Scaffold domain 584 793 5.2E-57 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 PRINTS PR00906 SecA protein signature 172 192 8.2E-65 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 PRINTS PR00906 SecA protein signature 102 116 8.2E-65 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 PRINTS PR00906 SecA protein signature 334 356 8.2E-65 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 PRINTS PR00906 SecA protein signature 118 128 8.2E-65 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 PRINTS PR00906 SecA protein signature 64 88 8.2E-65 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 PRINTS PR00906 SecA protein signature 371 388 8.2E-65 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 PRINTS PR00906 SecA protein signature 408 421 8.2E-65 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 SMART SM00958 230 353 6.0E-63 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 SUPERFAMILY SSF81767 229 363 2.62E-42 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Pfam PF00271 Helicase conserved C-terminal domain 428 545 2.4E-5 T 23-04-2016 IPR001650 Helicase, C-terminal UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Gene3D G3DSA:3.40.50.300 2 230 2.9E-124 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Gene3D G3DSA:3.40.50.300 364 410 2.9E-124 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02800 92e21272aaf0292daba71110fd307220 863 Gene3D G3DSA:1.10.3060.10 614 793 1.8E-44 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 UPTC3659_RS03140 10572077cc2d6ad449e7bade488254f7 239 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 13 81 1.2E-11 T 23-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 UPTC3659_RS03140 10572077cc2d6ad449e7bade488254f7 239 SUPERFAMILY SSF55729 74 225 1.93E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS03140 10572077cc2d6ad449e7bade488254f7 239 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 101 225 3.3E-31 T 23-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 UPTC3659_RS03140 10572077cc2d6ad449e7bade488254f7 239 PANTHER PTHR21367 36 225 1.1E-37 T 23-04-2016 IPR030700 Arginine-tRNA-protein transferase UPTC3659_RS03140 10572077cc2d6ad449e7bade488254f7 239 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 234 30.953 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic UPTC3659_RS03140 10572077cc2d6ad449e7bade488254f7 239 PIRSF PIRSF037208 1 238 2.8E-70 T 23-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 25 376 4.0E-156 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 Gene3D G3DSA:4.10.480.10 248 331 4.6E-39 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 81 227 2.5E-29 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 Gene3D G3DSA:3.40.50.700 69 245 7.7E-52 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 SUPERFAMILY SSF56770 69 331 2.49E-87 T 23-04-2016 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PIRSF PIRSF000310 25 379 6.5E-140 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 247 329 1.5E-32 T 23-04-2016 IPR027394 Cytochrome-c3 hydrogenase, C-terminal UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 252 270 3.6E-80 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 276 302 3.6E-80 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 304 317 3.6E-80 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 66 88 3.6E-80 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 180 204 3.6E-80 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 89 113 3.6E-80 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 234 251 3.6E-80 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 208 231 3.6E-80 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 135 158 3.6E-80 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PANTHER PTHR30013 21 379 2.2E-172 T 23-04-2016 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 UPTC3659_RS04100 40af846e1f144d69009efd20110ef8f7 379 PANTHER PTHR30013:SF7 21 379 2.2E-172 T 23-04-2016 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 Gene3D G3DSA:3.40.50.970 287 467 4.1E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 608 6.2E-232 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 ProSitePatterns PS00801 Transketolase signature 1. 25 44 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 ProSitePatterns PS00802 Transketolase signature 2. 412 428 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 Pfam PF02779 Transketolase, pyrimidine binding domain 307 466 6.1E-32 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 Gene3D G3DSA:3.40.50.920 482 608 2.2E-18 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 SMART SM00861 306 470 2.7E-55 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 SUPERFAMILY SSF52518 9 186 3.12E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 SUPERFAMILY SSF52518 230 368 3.12E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 PANTHER PTHR11624:SF20 13 205 3.2E-227 T 23-04-2016 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 PANTHER PTHR11624:SF20 228 609 3.2E-227 T 23-04-2016 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 SUPERFAMILY SSF52922 477 608 1.01E-19 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 PANTHER PTHR11624 13 205 3.2E-227 T 23-04-2016 IPR033247 Transketolase family UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 PANTHER PTHR11624 228 609 3.2E-227 T 23-04-2016 IPR033247 Transketolase family UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 1 609 38.974 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 8 269 8.6E-98 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 Gene3D G3DSA:3.40.50.970 10 182 3.5E-53 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 Gene3D G3DSA:3.40.50.970 226 286 3.5E-53 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS07840 9a93722d8c34561191bc9d201150cb97 609 Pfam PF02780 Transketolase, C-terminal domain 482 601 3.5E-14 T 23-04-2016 IPR033248 Transketolase, C-terminal domain UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 Gene3D G3DSA:3.40.190.80 153 245 1.3E-21 T 23-04-2016 UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 Gene3D G3DSA:3.30.540.10 3 143 8.8E-31 T 23-04-2016 UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 PANTHER PTHR20854 1 246 1.7E-40 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 PANTHER PTHR20854:SF5 1 246 1.7E-40 T 23-04-2016 UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 203 217 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 Pfam PF00459 Inositol monophosphatase family 4 232 4.1E-35 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 SUPERFAMILY SSF56655 3 246 3.53E-51 T 23-04-2016 UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.9E-9 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 200 224 1.9E-9 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 UPTC3659_RS00875 1c5ca0fff59248e50baf7eea89068902 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.9E-9 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 PANTHER PTHR21499 1 399 2.3E-159 T 23-04-2016 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 SUPERFAMILY SSF55021 245 324 7.24E-19 T 23-04-2016 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 Gene3D G3DSA:3.30.70.260 268 321 2.1E-4 T 23-04-2016 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 Pfam PF13840 ACT domain 331 394 9.2E-15 T 23-04-2016 IPR027795 GATS-like ACT domain UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 PANTHER PTHR21499:SF27 1 399 2.3E-159 T 23-04-2016 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 SUPERFAMILY SSF55021 328 399 9.16E-22 T 23-04-2016 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 Pfam PF00696 Amino acid kinase family 1 225 1.0E-53 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 397 5.1E-121 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 PIRSF PIRSF000726 55 400 1.4E-135 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 Pfam PF01842 ACT domain 268 323 8.9E-10 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 SUPERFAMILY SSF53633 3 242 9.69E-74 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 398 4.0E-143 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS03845 2383524e43ba1aff48d1c6927aceb53a 400 Gene3D G3DSA:3.40.1160.10 1 245 8.8E-72 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 UPTC3659_RS08450 249890f987668dc6c5a8bef43987e583 346 SMART SM00267 173 343 2.9E-6 T 23-04-2016 IPR000160 GGDEF domain UPTC3659_RS08450 249890f987668dc6c5a8bef43987e583 346 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 181 325 1.0E-13 T 23-04-2016 IPR000160 GGDEF domain UPTC3659_RS08450 249890f987668dc6c5a8bef43987e583 346 Pfam PF00990 Diguanylate cyclase, GGDEF domain 185 325 6.2E-13 T 23-04-2016 IPR000160 GGDEF domain UPTC3659_RS08450 249890f987668dc6c5a8bef43987e583 346 Gene3D G3DSA:3.30.70.270 187 324 1.9E-16 T 23-04-2016 UPTC3659_RS08450 249890f987668dc6c5a8bef43987e583 346 SUPERFAMILY SSF55073 191 324 1.49E-12 T 23-04-2016 IPR029787 Nucleotide cyclase UPTC3659_RS00260 0437dcac32a4d99b461c3dba03572bcc 269 Pfam PF00950 ABC 3 transport family 8 262 5.9E-71 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 UPTC3659_RS00260 0437dcac32a4d99b461c3dba03572bcc 269 PANTHER PTHR30477 1 260 2.4E-67 T 23-04-2016 UPTC3659_RS00260 0437dcac32a4d99b461c3dba03572bcc 269 SUPERFAMILY SSF81345 5 260 1.57E-36 T 23-04-2016 IPR029022 ABC transporter, BtuC-like UPTC3659_RS00260 0437dcac32a4d99b461c3dba03572bcc 269 Gene3D G3DSA:1.10.3470.10 16 259 2.0E-10 T 23-04-2016 IPR029022 ABC transporter, BtuC-like UPTC3659_RS00260 0437dcac32a4d99b461c3dba03572bcc 269 PANTHER PTHR30477:SF0 1 260 2.4E-67 T 23-04-2016 UPTC3659_RS04610 81ba4248a426e424343117e9ee978b3b 211 Pfam PF00717 Peptidase S24-like 131 193 1.2E-9 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B UPTC3659_RS04610 81ba4248a426e424343117e9ee978b3b 211 SUPERFAMILY SSF51306 121 210 1.44E-18 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C UPTC3659_RS04610 81ba4248a426e424343117e9ee978b3b 211 Gene3D G3DSA:2.10.109.10 92 210 2.1E-17 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 2.5E-23 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 SUPERFAMILY SSF54534 104 245 1.41E-31 T 23-04-2016 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 PIRSF PIRSF003095 1 439 1.4E-104 T 23-04-2016 IPR005215 Trigger factor GO:0015031 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 161 241 1.1E-16 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 TIGRFAM TIGR00115 tig: trigger factor 12 424 9.8E-109 T 23-04-2016 IPR005215 Trigger factor GO:0015031 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 Gene3D G3DSA:1.10.3120.10 207 397 2.8E-42 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 PANTHER PTHR30560 1 427 3.3E-67 T 23-04-2016 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 SUPERFAMILY SSF102735 1 129 3.01E-23 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 Hamap MF_00303 Trigger factor [tig]. 1 434 18.982 T 23-04-2016 IPR005215 Trigger factor GO:0015031 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 268 425 6.5E-32 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 SUPERFAMILY SSF109998 252 434 4.22E-29 T 23-04-2016 IPR027304 Trigger factor/SurA domain UPTC3659_RS08460 63a41b3b8e1f189d1da0b56e9e4bb7fa 439 Gene3D G3DSA:3.30.70.1050 1 119 2.9E-21 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 UPTC3659_RS04040 833c540572ea7d87eee17598fb8627f5 175 PANTHER PTHR10192 2 173 9.8E-81 T 23-04-2016 UPTC3659_RS04040 833c540572ea7d87eee17598fb8627f5 175 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 145 1.1E-37 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS04040 833c540572ea7d87eee17598fb8627f5 175 SUPERFAMILY SSF53218 1 172 6.67E-45 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS04040 833c540572ea7d87eee17598fb8627f5 175 Pfam PF00994 Probable molybdopterin binding domain 5 149 2.3E-29 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS04040 833c540572ea7d87eee17598fb8627f5 175 Gene3D G3DSA:3.40.980.10 2 163 8.9E-53 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS04040 833c540572ea7d87eee17598fb8627f5 175 SMART SM00852 5 151 4.0E-25 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS06975 00f4c47ae629e663ae4cfcc3a0c3881d 173 PIRSF PIRSF017018 1 173 3.9E-71 T 23-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type UPTC3659_RS06975 00f4c47ae629e663ae4cfcc3a0c3881d 173 Pfam PF10634 Fe2+ transport protein 21 170 2.9E-68 T 23-04-2016 IPR018470 Periplasmic metal-binding protein Tp34-type UPTC3659_RS03780 08d8aaf0d199e5fb45a5d040272ff1ea 199 Pfam PF01926 50S ribosome-binding GTPase 24 152 3.3E-20 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS03780 08d8aaf0d199e5fb45a5d040272ff1ea 199 Gene3D G3DSA:3.40.50.300 4 189 3.0E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03780 08d8aaf0d199e5fb45a5d040272ff1ea 199 SUPERFAMILY SSF52540 4 190 3.98E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03780 08d8aaf0d199e5fb45a5d040272ff1ea 199 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 5 189 1.9E-52 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 UPTC3659_RS03780 08d8aaf0d199e5fb45a5d040272ff1ea 199 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 10 193 26.38 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 UPTC3659_RS03780 08d8aaf0d199e5fb45a5d040272ff1ea 199 PANTHER PTHR11649 2 190 2.4E-33 T 23-04-2016 UPTC3659_RS07380 eb5b5a018ae8ef39318a51bfba0f29f0 328 Gene3D G3DSA:3.90.25.10 177 327 1.1E-40 T 23-04-2016 UPTC3659_RS07380 eb5b5a018ae8ef39318a51bfba0f29f0 328 Gene3D G3DSA:3.40.50.720 1 176 4.4E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07380 eb5b5a018ae8ef39318a51bfba0f29f0 328 SUPERFAMILY SSF51735 1 327 7.28E-90 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07380 eb5b5a018ae8ef39318a51bfba0f29f0 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 327 1.8E-150 T 23-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 UPTC3659_RS07380 eb5b5a018ae8ef39318a51bfba0f29f0 328 PANTHER PTHR10366:SF39 2 327 1.8E-105 T 23-04-2016 UPTC3659_RS07380 eb5b5a018ae8ef39318a51bfba0f29f0 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 257 6.5E-58 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 UPTC3659_RS07380 eb5b5a018ae8ef39318a51bfba0f29f0 328 PANTHER PTHR10366 2 327 1.8E-105 T 23-04-2016 UPTC3659_RS03955 366939e9d9cbfbdfdbbb80303a79b730 348 Pfam PF04055 Radical SAM superfamily 46 218 2.6E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS03955 366939e9d9cbfbdfdbbb80303a79b730 348 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 39 345 1.1E-129 T 23-04-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 UPTC3659_RS03955 366939e9d9cbfbdfdbbb80303a79b730 348 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 1 348 52.572 T 23-04-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 UPTC3659_RS03955 366939e9d9cbfbdfdbbb80303a79b730 348 PIRSF PIRSF004762 1 347 8.4E-103 T 23-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 UPTC3659_RS03955 366939e9d9cbfbdfdbbb80303a79b730 348 PANTHER PTHR22976 2 348 2.5E-163 T 23-04-2016 UPTC3659_RS03955 366939e9d9cbfbdfdbbb80303a79b730 348 Gene3D G3DSA:3.20.20.70 2 332 1.0E-53 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS03955 366939e9d9cbfbdfdbbb80303a79b730 348 SUPERFAMILY SSF102114 3 330 1.57E-47 T 23-04-2016 UPTC3659_RS03955 366939e9d9cbfbdfdbbb80303a79b730 348 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 3 345 1.0E-151 T 23-04-2016 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 UPTC3659_RS03955 366939e9d9cbfbdfdbbb80303a79b730 348 PANTHER PTHR22976:SF29 2 348 2.5E-163 T 23-04-2016 UPTC3659_RS04465 8111d7e6f8a785b26ae9acd2d95a03d4 541 Pfam PF02254 TrkA-N domain 402 498 4.3E-11 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 UPTC3659_RS04465 8111d7e6f8a785b26ae9acd2d95a03d4 541 PANTHER PTHR16254:SF6 7 491 2.2E-112 T 23-04-2016 UPTC3659_RS04465 8111d7e6f8a785b26ae9acd2d95a03d4 541 SUPERFAMILY SSF51735 397 531 8.56E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS04465 8111d7e6f8a785b26ae9acd2d95a03d4 541 Gene3D G3DSA:3.40.50.720 397 499 1.5E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS04465 8111d7e6f8a785b26ae9acd2d95a03d4 541 PANTHER PTHR16254 7 491 2.2E-112 T 23-04-2016 UPTC3659_RS04465 8111d7e6f8a785b26ae9acd2d95a03d4 541 Pfam PF00999 Sodium/hydrogen exchanger family 8 370 1.3E-60 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 UPTC3659_RS05965 e7bea78ba22da076b9187bf9777c5cb8 244 Pfam PF01416 tRNA pseudouridine synthase 141 240 1.5E-17 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS05965 e7bea78ba22da076b9187bf9777c5cb8 244 PANTHER PTHR11142:SF0 3 240 1.2E-48 T 23-04-2016 UPTC3659_RS05965 e7bea78ba22da076b9187bf9777c5cb8 244 Gene3D G3DSA:3.30.70.660 106 238 4.7E-29 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS05965 e7bea78ba22da076b9187bf9777c5cb8 244 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 240 28.564 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS05965 e7bea78ba22da076b9187bf9777c5cb8 244 Gene3D G3DSA:3.30.70.580 3 103 1.2E-20 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS05965 e7bea78ba22da076b9187bf9777c5cb8 244 PANTHER PTHR11142 3 240 1.2E-48 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS05965 e7bea78ba22da076b9187bf9777c5cb8 244 SUPERFAMILY SSF55120 2 242 4.17E-59 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS05965 e7bea78ba22da076b9187bf9777c5cb8 244 PIRSF PIRSF001430 1 244 3.8E-68 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS05965 e7bea78ba22da076b9187bf9777c5cb8 244 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 235 4.8E-49 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS02535 1dd36206c8fbf26e8ad2fbe0802e8c5e 317 Gene3D G3DSA:3.90.25.10 178 286 4.7E-27 T 23-04-2016 UPTC3659_RS02535 1dd36206c8fbf26e8ad2fbe0802e8c5e 317 SUPERFAMILY SSF51735 1 312 5.44E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02535 1dd36206c8fbf26e8ad2fbe0802e8c5e 317 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 309 1.6E-99 T 23-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 UPTC3659_RS02535 1dd36206c8fbf26e8ad2fbe0802e8c5e 317 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 241 1.2E-43 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 UPTC3659_RS02535 1dd36206c8fbf26e8ad2fbe0802e8c5e 317 Gene3D G3DSA:3.40.50.720 1 177 6.2E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02535 1dd36206c8fbf26e8ad2fbe0802e8c5e 317 PANTHER PTHR10366:SF469 2 313 1.1E-64 T 23-04-2016 UPTC3659_RS02535 1dd36206c8fbf26e8ad2fbe0802e8c5e 317 PANTHER PTHR10366 2 313 1.1E-64 T 23-04-2016 UPTC3659_RS00650 2ac632c8a39d066dbe30226127fa33bb 281 Gene3D G3DSA:1.10.600.10 3 264 7.2E-74 T 23-04-2016 IPR008949 Isoprenoid synthase domain UPTC3659_RS00650 2ac632c8a39d066dbe30226127fa33bb 281 PANTHER PTHR12001:SF23 24 264 8.2E-67 T 23-04-2016 UPTC3659_RS00650 2ac632c8a39d066dbe30226127fa33bb 281 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 73 89 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 UPTC3659_RS00650 2ac632c8a39d066dbe30226127fa33bb 281 PANTHER PTHR12001 24 264 8.2E-67 T 23-04-2016 IPR017446 Polyprenyl synthetase-related UPTC3659_RS00650 2ac632c8a39d066dbe30226127fa33bb 281 Pfam PF00348 Polyprenyl synthetase 23 248 2.1E-48 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 UPTC3659_RS00650 2ac632c8a39d066dbe30226127fa33bb 281 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 UPTC3659_RS00650 2ac632c8a39d066dbe30226127fa33bb 281 SUPERFAMILY SSF48576 3 264 1.27E-68 T 23-04-2016 IPR008949 Isoprenoid synthase domain UPTC3659_RS03530 1ee88d809aacc89af8df55692a18deb5 396 PANTHER PTHR23417 124 285 2.8E-32 T 23-04-2016 UPTC3659_RS03530 1ee88d809aacc89af8df55692a18deb5 396 SUPERFAMILY SSF53335 109 284 1.64E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03530 1ee88d809aacc89af8df55692a18deb5 396 Pfam PF02390 Putative methyltransferase 122 283 1.0E-37 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 UPTC3659_RS03530 1ee88d809aacc89af8df55692a18deb5 396 Gene3D G3DSA:3.40.50.150 124 245 2.3E-18 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03530 1ee88d809aacc89af8df55692a18deb5 396 PANTHER PTHR23417:SF14 124 285 2.8E-32 T 23-04-2016 UPTC3659_RS03530 1ee88d809aacc89af8df55692a18deb5 396 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 119 284 1.3E-39 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 UPTC3659_RS03530 1ee88d809aacc89af8df55692a18deb5 396 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 58 288 24.806 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 UPTC3659_RS03920 ebfb34011c1c4edb571ec908f7d27fee 197 PANTHER PTHR30353:SF8 1 159 6.0E-34 T 23-04-2016 UPTC3659_RS03920 ebfb34011c1c4edb571ec908f7d27fee 197 Pfam PF09335 SNARE associated Golgi protein 28 146 1.5E-15 T 23-04-2016 IPR032816 SNARE associated Golgi protein UPTC3659_RS03920 ebfb34011c1c4edb571ec908f7d27fee 197 PANTHER PTHR30353 1 159 6.0E-34 T 23-04-2016 IPR032818 DedA family UPTC3659_RS00645 603f78ece975a2b41960e74c835253a9 359 Pfam PF13180 PDZ domain 170 244 4.4E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS00645 603f78ece975a2b41960e74c835253a9 359 Gene3D G3DSA:2.30.42.10 263 330 1.9E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS00645 603f78ece975a2b41960e74c835253a9 359 SUPERFAMILY SSF50156 250 331 1.45E-12 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS00645 603f78ece975a2b41960e74c835253a9 359 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 275 320 1.0E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS00645 603f78ece975a2b41960e74c835253a9 359 SMART SM00228 268 332 1.6E-6 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS00645 603f78ece975a2b41960e74c835253a9 359 SUPERFAMILY SSF50156 156 241 8.81E-5 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Gene3D G3DSA:3.30.930.10 491 673 1.6E-33 T 23-04-2016 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Gene3D G3DSA:3.30.56.20 403 468 2.6E-17 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Pfam PF03147 Ferredoxin-fold anticodon binding domain 684 776 1.3E-19 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 SUPERFAMILY SSF55681 460 673 1.99E-28 T 23-04-2016 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 SUPERFAMILY SSF54991 680 776 1.57E-23 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 SMART SM00874 395 464 6.3E-16 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 PANTHER PTHR10947:SF0 2 776 2.9E-130 T 23-04-2016 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 PANTHER PTHR10947 2 776 2.9E-130 T 23-04-2016 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 SMART SM00873 216 379 0.0012 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Pfam PF01588 Putative tRNA binding domain 45 140 2.8E-24 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Gene3D G3DSA:3.50.40.10 210 363 1.6E-7 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Pfam PF03484 tRNA synthetase B5 domain 404 463 8.7E-12 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 776 2.3E-197 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Gene3D G3DSA:3.30.56.10 1 39 6.1E-24 T 23-04-2016 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 SUPERFAMILY SSF56037 227 372 3.14E-12 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 SUPERFAMILY SSF46955 403 468 2.47E-14 T 23-04-2016 IPR009061 Putative DNA-binding domain UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 770 33.496 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 SMART SM00896 684 776 7.9E-25 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 SUPERFAMILY SSF50249 44 193 2.23E-42 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Pfam PF03483 B3/4 domain 233 363 1.1E-8 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Gene3D G3DSA:2.40.50.140 44 202 3.2E-45 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07145 d3317859622592cb250f3f250777b8b7 776 Gene3D G3DSA:3.30.70.380 686 776 5.6E-19 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 UPTC3659_RS03030 fdd8d4bdf1f1972e45f73c405461515a 155 Pfam PF13664 Domain of unknown function (DUF4149) 8 116 1.4E-11 T 23-04-2016 IPR025423 Domain of unknown function DUF4149 UPTC3659_RS02560 e1294e9e83fa3ea4719210e753648497 207 Gene3D G3DSA:3.30.420.40 1 58 2.9E-23 T 23-04-2016 UPTC3659_RS02560 e1294e9e83fa3ea4719210e753648497 207 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 205 14.605 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 UPTC3659_RS02560 e1294e9e83fa3ea4719210e753648497 207 Pfam PF03309 Type III pantothenate kinase 52 161 1.1E-13 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 UPTC3659_RS02560 e1294e9e83fa3ea4719210e753648497 207 SUPERFAMILY SSF53067 1 82 3.82E-30 T 23-04-2016 UPTC3659_RS02560 e1294e9e83fa3ea4719210e753648497 207 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 200 9.6E-22 T 23-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 UPTC3659_RS02560 e1294e9e83fa3ea4719210e753648497 207 Gene3D G3DSA:3.30.420.40 63 202 1.1E-34 T 23-04-2016 UPTC3659_RS02560 e1294e9e83fa3ea4719210e753648497 207 SUPERFAMILY SSF53067 84 201 5.18E-27 T 23-04-2016 UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 6.0E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 PANTHER PTHR26402:SF50 2 224 1.6E-72 T 23-04-2016 UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 SMART SM00448 2 112 1.6E-37 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 SUPERFAMILY SSF52172 2 128 8.25E-38 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 Pfam PF00072 Response regulator receiver domain 4 113 2.1E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 Gene3D G3DSA:3.40.50.2300 2 127 1.4E-37 T 23-04-2016 UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 SUPERFAMILY SSF46894 127 222 1.9E-23 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 PANTHER PTHR26402 2 224 1.6E-72 T 23-04-2016 UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 SMART SM00862 146 222 2.2E-22 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS04485 f10b516049de55fece8e5ca1e6d30d55 224 Gene3D G3DSA:1.10.10.10 131 223 4.4E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01965 639679a74799a1bb80d0b842e3a030f3 221 PANTHER PTHR10422:SF23 17 157 1.5E-44 T 23-04-2016 UPTC3659_RS01965 639679a74799a1bb80d0b842e3a030f3 221 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 3 220 2.8E-86 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO UPTC3659_RS01965 639679a74799a1bb80d0b842e3a030f3 221 PANTHER PTHR10422 17 157 1.5E-44 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 UPTC3659_RS01965 639679a74799a1bb80d0b842e3a030f3 221 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 3 220 1.3E-88 T 23-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO UPTC3659_RS01965 639679a74799a1bb80d0b842e3a030f3 221 Gene3D G3DSA:1.10.760.10 15 139 4.9E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS01965 639679a74799a1bb80d0b842e3a030f3 221 Gene3D G3DSA:1.10.760.10 180 221 4.9E-21 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS01965 639679a74799a1bb80d0b842e3a030f3 221 SUPERFAMILY SSF46626 183 221 1.54E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS01965 639679a74799a1bb80d0b842e3a030f3 221 SUPERFAMILY SSF46626 15 151 1.54E-19 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 5.5E-36 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 5.5E-36 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 5.5E-36 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 5.5E-36 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 5.9E-58 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 PANTHER PTHR12220 1 140 2.5E-74 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.367 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 Gene3D G3DSA:3.90.1170.10 23 139 7.5E-54 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 SUPERFAMILY SSF54686 1 137 1.83E-57 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00420 3dce4bdd8a538f6126de1f4c52528179 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.5E-49 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PANTHER PTHR24291:SF46 33 457 3.7E-91 T 23-04-2016 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00463 E-class P450 group I signature 393 403 6.7E-25 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00463 E-class P450 group I signature 360 384 6.7E-25 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00463 E-class P450 group I signature 149 167 6.7E-25 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00463 E-class P450 group I signature 258 275 6.7E-25 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00463 E-class P450 group I signature 278 304 6.7E-25 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00463 E-class P450 group I signature 403 426 6.7E-25 T 23-04-2016 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00385 P450 superfamily signature 321 332 4.2E-14 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00385 P450 superfamily signature 403 414 4.2E-14 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00385 P450 superfamily signature 394 403 4.2E-14 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PRINTS PR00385 P450 superfamily signature 269 286 4.2E-14 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 Gene3D G3DSA:1.10.630.10 41 456 5.8E-103 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 396 405 - T 23-04-2016 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 Reactome: REACT_13433 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 Pfam PF00067 Cytochrome P450 43 438 4.2E-83 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 PANTHER PTHR24291 33 457 3.7E-91 T 23-04-2016 UPTC3659_RS01695 54c05f116c9ec2e294f958d6f1c78e65 457 SUPERFAMILY SSF48264 42 455 7.99E-99 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 UPTC3659_RS05935 11db90304d2e37ed09bb4dd4ded7e368 346 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 278 307 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site UPTC3659_RS05935 11db90304d2e37ed09bb4dd4ded7e368 346 PANTHER PTHR11061:SF25 21 345 1.4E-97 T 23-04-2016 UPTC3659_RS05935 11db90304d2e37ed09bb4dd4ded7e368 346 PANTHER PTHR11061 21 345 1.4E-97 T 23-04-2016 UPTC3659_RS05935 11db90304d2e37ed09bb4dd4ded7e368 346 SUPERFAMILY SSF53335 11 344 1.16E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS05935 11db90304d2e37ed09bb4dd4ded7e368 346 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 3 345 3.7E-133 T 23-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 UPTC3659_RS05935 11db90304d2e37ed09bb4dd4ded7e368 346 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 3 345 2.4E-132 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 UPTC3659_RS05935 11db90304d2e37ed09bb4dd4ded7e368 346 Gene3D G3DSA:3.40.50.150 151 343 6.9E-39 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS05935 11db90304d2e37ed09bb4dd4ded7e368 346 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 1 345 35.658 T 23-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 UPTC3659_RS06585 28e0a8bfec7aae3c2adbe78613e35fd3 414 SUPERFAMILY SSF81648 242 388 1.26E-36 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 UPTC3659_RS06585 28e0a8bfec7aae3c2adbe78613e35fd3 414 Pfam PF00033 Cytochrome b/b6/petB 30 215 2.1E-56 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 UPTC3659_RS06585 28e0a8bfec7aae3c2adbe78613e35fd3 414 Gene3D G3DSA:1.20.810.10 12 413 2.4E-128 T 23-04-2016 IPR027387 Cytochrome b/b6-like domain UPTC3659_RS06585 28e0a8bfec7aae3c2adbe78613e35fd3 414 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 287 395 6.8E-29 T 23-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 UPTC3659_RS06585 28e0a8bfec7aae3c2adbe78613e35fd3 414 SUPERFAMILY SSF81342 12 289 7.53E-81 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 UPTC3659_RS06585 28e0a8bfec7aae3c2adbe78613e35fd3 414 PANTHER PTHR19271 242 411 4.5E-119 T 23-04-2016 UPTC3659_RS06585 28e0a8bfec7aae3c2adbe78613e35fd3 414 PANTHER PTHR19271 7 226 4.5E-119 T 23-04-2016 UPTC3659_RS06170 aeaa31713d400d8fb8c94336d7eb46dc 172 PIRSF PIRSF006105 1 165 1.2E-46 T 23-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB UPTC3659_RS06170 aeaa31713d400d8fb8c94336d7eb46dc 172 PANTHER PTHR38604 1 156 1.5E-23 T 23-04-2016 UPTC3659_RS06170 aeaa31713d400d8fb8c94336d7eb46dc 172 Gene3D G3DSA:4.10.1020.10 66 136 5.4E-26 T 23-04-2016 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain UPTC3659_RS06170 aeaa31713d400d8fb8c94336d7eb46dc 172 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 23 149 2.8E-39 T 23-04-2016 IPR005591 Nitrate reductase cytochrome c-type subunit NapB UPTC3659_RS06170 aeaa31713d400d8fb8c94336d7eb46dc 172 SUPERFAMILY SSF48695 37 158 1.27E-34 T 23-04-2016 IPR011031 Multihaem cytochrome UPTC3659_RS06170 aeaa31713d400d8fb8c94336d7eb46dc 172 PANTHER PTHR38604:SF1 1 156 1.5E-23 T 23-04-2016 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PANTHER PTHR10133 2 879 8.8E-282 T 23-04-2016 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Pfam PF00476 DNA polymerase family A 510 876 2.4E-130 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Gene3D G3DSA:3.30.420.10 297 501 2.9E-52 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 SUPERFAMILY SSF47807 167 279 2.09E-26 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 SMART SM00479 317 479 8.2E-4 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 SUPERFAMILY SSF56672 485 878 1.67E-128 T 23-04-2016 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 166 7.6E-43 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Gene3D G3DSA:1.20.1060.10 502 621 1.9E-40 T 23-04-2016 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Gene3D G3DSA:3.30.70.370 622 670 3.2E-52 T 23-04-2016 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Gene3D G3DSA:3.30.70.370 774 878 3.2E-52 T 23-04-2016 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 SMART SM00482 645 843 3.7E-81 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 SMART SM00474 297 478 2.0E-24 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 ProSitePatterns PS00447 DNA polymerase family A signature. 709 728 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 TIGRFAM TIGR00593 pola: DNA polymerase I 4 879 5.5E-256 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 826 839 3.2E-57 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 682 3.2E-57 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 709 734 3.2E-57 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 799 815 3.2E-57 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 614 636 3.2E-57 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 746 757 3.2E-57 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 637 652 3.2E-57 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 768 779 3.2E-57 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Pfam PF01612 3'-5' exonuclease 299 477 4.1E-27 T 23-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 SMART SM00475 1 258 2.5E-97 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 SUPERFAMILY SSF53098 297 479 3.51E-39 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 167 252 1.1E-25 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 SMART SM00279 169 204 3.1E-15 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Gene3D G3DSA:3.40.50.1010 3 181 1.5E-54 T 23-04-2016 IPR029060 PIN domain-like UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 PANTHER PTHR10133:SF27 2 879 8.8E-282 T 23-04-2016 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Gene3D G3DSA:1.10.150.20 182 242 5.9E-25 T 23-04-2016 UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 SUPERFAMILY SSF88723 1 166 1.26E-44 T 23-04-2016 IPR029060 PIN domain-like UPTC3659_RS07780 72a1b3e55c95296bd468f648d121a61d 879 Gene3D G3DSA:1.10.150.20 671 773 1.9E-35 T 23-04-2016 UPTC3659_RS01085 e30eda731bcc7174f7144e25a759091b 161 Gene3D G3DSA:3.30.1330.60 51 159 1.5E-33 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS01085 e30eda731bcc7174f7144e25a759091b 161 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 56 158 7.0E-38 T 23-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 UPTC3659_RS01085 e30eda731bcc7174f7144e25a759091b 161 PANTHER PTHR30128 55 160 7.0E-39 T 23-04-2016 UPTC3659_RS01085 e30eda731bcc7174f7144e25a759091b 161 Pfam PF00691 OmpA family 57 153 1.4E-20 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS01085 e30eda731bcc7174f7144e25a759091b 161 SUPERFAMILY SSF103088 52 159 3.4E-32 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS01085 e30eda731bcc7174f7144e25a759091b 161 PRINTS PR01021 OMPA domain signature 58 80 3.19E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 UPTC3659_RS01085 e30eda731bcc7174f7144e25a759091b 161 PRINTS PR01021 OMPA domain signature 89 104 3.19E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 UPTC3659_RS01085 e30eda731bcc7174f7144e25a759091b 161 PRINTS PR01021 OMPA domain signature 104 120 3.19E-14 T 23-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 UPTC3659_RS08690 7998a21ea07835a4fe3c55cec505440c 334 Gene3D G3DSA:3.40.190.10 2 117 8.8E-33 T 23-04-2016 UPTC3659_RS08690 7998a21ea07835a4fe3c55cec505440c 334 Gene3D G3DSA:3.40.190.10 266 308 8.8E-33 T 23-04-2016 UPTC3659_RS08690 7998a21ea07835a4fe3c55cec505440c 334 Gene3D G3DSA:3.40.190.10 120 265 2.6E-51 T 23-04-2016 UPTC3659_RS08690 7998a21ea07835a4fe3c55cec505440c 334 PANTHER PTHR30006:SF4 5 332 6.2E-112 T 23-04-2016 UPTC3659_RS08690 7998a21ea07835a4fe3c55cec505440c 334 SUPERFAMILY SSF53850 20 330 4.18E-79 T 23-04-2016 UPTC3659_RS08690 7998a21ea07835a4fe3c55cec505440c 334 PANTHER PTHR30006 5 332 6.2E-112 T 23-04-2016 UPTC3659_RS08690 7998a21ea07835a4fe3c55cec505440c 334 PIRSF PIRSF002825 9 334 1.5E-84 T 23-04-2016 IPR026045 Ferric binding protein UPTC3659_RS08690 7998a21ea07835a4fe3c55cec505440c 334 Pfam PF13343 Bacterial extracellular solute-binding protein 67 298 8.1E-32 T 23-04-2016 UPTC3659_RS08205 0d1513912c3cf40851c663f208a70a36 194 PANTHER PTHR12589 3 152 4.2E-17 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein UPTC3659_RS08205 0d1513912c3cf40851c663f208a70a36 194 Gene3D G3DSA:3.30.479.10 1 146 2.2E-31 T 23-04-2016 UPTC3659_RS08205 0d1513912c3cf40851c663f208a70a36 194 SUPERFAMILY SSF55620 1 146 1.22E-31 T 23-04-2016 UPTC3659_RS08205 0d1513912c3cf40851c663f208a70a36 194 PANTHER PTHR12589:SF5 3 152 4.2E-17 T 23-04-2016 UPTC3659_RS08205 0d1513912c3cf40851c663f208a70a36 194 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 143 1.5E-26 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein UPTC3659_RS04565 e6c74a09cdbcc7560e7142056d4c3059 438 PANTHER PTHR11206 1 437 5.5E-100 T 23-04-2016 UPTC3659_RS04565 e6c74a09cdbcc7560e7142056d4c3059 438 Pfam PF01554 MatE 14 170 6.2E-24 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 UPTC3659_RS04565 e6c74a09cdbcc7560e7142056d4c3059 438 Pfam PF01554 MatE 238 396 6.2E-12 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 UPTC3659_RS04565 e6c74a09cdbcc7560e7142056d4c3059 438 PANTHER PTHR11206:SF48 1 437 5.5E-100 T 23-04-2016 UPTC3659_RS08665 a12005339958db7a95ed867c77fe1953 541 PANTHER PTHR30435:SF1 1 127 2.1E-72 T 23-04-2016 UPTC3659_RS08665 a12005339958db7a95ed867c77fe1953 541 PANTHER PTHR30435:SF1 416 541 2.1E-72 T 23-04-2016 UPTC3659_RS08665 a12005339958db7a95ed867c77fe1953 541 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 521 1.0E-69 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G UPTC3659_RS08665 a12005339958db7a95ed867c77fe1953 541 PANTHER PTHR30435 1 127 2.1E-72 T 23-04-2016 UPTC3659_RS08665 a12005339958db7a95ed867c77fe1953 541 PANTHER PTHR30435 416 541 2.1E-72 T 23-04-2016 UPTC3659_RS08665 a12005339958db7a95ed867c77fe1953 541 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 459 539 2.8E-19 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UPTC3659_RS08665 a12005339958db7a95ed867c77fe1953 541 SUPERFAMILY SSF117143 169 211 5.75E-50 T 23-04-2016 UPTC3659_RS08665 a12005339958db7a95ed867c77fe1953 541 SUPERFAMILY SSF117143 84 137 5.75E-50 T 23-04-2016 UPTC3659_RS08665 a12005339958db7a95ed867c77fe1953 541 SUPERFAMILY SSF117143 327 501 5.75E-50 T 23-04-2016 UPTC3659_RS04685 30134cab627a6c4c2ac28132ecd1604d 317 Gene3D G3DSA:3.30.160.60 289 316 2.4E-7 T 23-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 UPTC3659_RS04685 30134cab627a6c4c2ac28132ecd1604d 317 PANTHER PTHR30518 11 316 1.3E-42 T 23-04-2016 UPTC3659_RS04685 30134cab627a6c4c2ac28132ecd1604d 317 Pfam PF02618 YceG-like family 44 316 1.1E-56 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like UPTC3659_RS04685 30134cab627a6c4c2ac28132ecd1604d 317 PANTHER PTHR30518:SF2 11 316 1.3E-42 T 23-04-2016 UPTC3659_RS04685 30134cab627a6c4c2ac28132ecd1604d 317 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 129 316 3.2E-39 T 23-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like UPTC3659_RS06715 1b93b2cf5ce5031a4b944c1cacac33b9 208 PANTHER PTHR20857:SF15 1 204 1.7E-69 T 23-04-2016 UPTC3659_RS06715 1b93b2cf5ce5031a4b944c1cacac33b9 208 SUPERFAMILY SSF51391 4 200 1.96E-60 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06715 1b93b2cf5ce5031a4b944c1cacac33b9 208 Pfam PF02581 Thiamine monophosphate synthase/TENI 6 184 3.6E-61 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06715 1b93b2cf5ce5031a4b944c1cacac33b9 208 Gene3D G3DSA:3.20.20.70 3 203 7.9E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS06715 1b93b2cf5ce5031a4b944c1cacac33b9 208 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 3 202 26.839 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06715 1b93b2cf5ce5031a4b944c1cacac33b9 208 PANTHER PTHR20857 1 204 1.7E-69 T 23-04-2016 UPTC3659_RS06715 1b93b2cf5ce5031a4b944c1cacac33b9 208 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 194 4.5E-62 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 Gene3D G3DSA:3.30.230.10 220 390 9.4E-66 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 Pfam PF01751 Toprim domain 417 528 1.3E-18 T 23-04-2016 IPR006171 Toprim domain UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 Pfam PF00204 DNA gyrase B 221 388 8.7E-58 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 Gene3D G3DSA:3.40.50.670 686 754 8.7E-96 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 Gene3D G3DSA:3.40.50.670 402 548 8.7E-96 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PANTHER PTHR10169 689 772 8.0E-279 T 23-04-2016 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PANTHER PTHR10169 4 551 8.0E-279 T 23-04-2016 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 SUPERFAMILY SSF55874 7 218 5.63E-71 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 772 97.106 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 700 761 1.6E-29 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 725 737 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 181 196 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 7 17 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 310 326 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 741 757 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 196 209 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 358 372 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 468 477 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 372 392 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR01159 DNA gyrase subunit B signature 240 258 6.0E-64 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 772 3.8E-297 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 174 5.4E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR00418 DNA topoisomerase II family signature 71 84 8.6E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR00418 DNA topoisomerase II family signature 522 534 8.6E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR00418 DNA topoisomerase II family signature 114 128 8.6E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR00418 DNA topoisomerase II family signature 484 500 8.6E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR00418 DNA topoisomerase II family signature 266 279 8.6E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR00418 DNA topoisomerase II family signature 502 519 8.6E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR00418 DNA topoisomerase II family signature 36 51 8.6E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR00418 DNA topoisomerase II family signature 704 720 8.6E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 PRINTS PR00418 DNA topoisomerase II family signature 418 432 8.6E-71 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 Gene3D G3DSA:3.30.565.10 7 218 5.7E-90 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 SUPERFAMILY SSF56719 698 767 6.02E-86 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 SUPERFAMILY SSF56719 392 558 6.02E-86 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 SMART SM00433 36 765 3.5E-289 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 SUPERFAMILY SSF54211 221 389 8.16E-54 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 SMART SM00387 32 176 6.4E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS00015 56c91620fe0b7357978f95deae05ed96 772 ProSitePatterns PS00177 DNA topoisomerase II signature. 420 428 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 PANTHER PTHR32432:SF4 3 444 3.3E-83 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 Gene3D G3DSA:3.30.420.40 203 227 3.7E-16 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 Gene3D G3DSA:3.30.420.40 289 339 3.7E-16 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 Gene3D G3DSA:3.30.1490.110 92 148 4.3E-10 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 SUPERFAMILY SSF53067 192 370 7.98E-28 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 459 23.47 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 PANTHER PTHR32432 3 444 3.3E-83 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 Gene3D G3DSA:3.30.420.40 3 75 1.8E-16 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 Gene3D G3DSA:3.30.420.40 149 202 1.8E-16 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 SUPERFAMILY SSF53067 3 189 3.82E-46 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 Gene3D G3DSA:3.90.640.10 228 288 5.0E-12 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 2 372 3.0E-126 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 Pfam PF14450 Cell division protein FtsA 200 346 5.0E-14 T 23-04-2016 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 PIRSF PIRSF003101 2 459 4.4E-95 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 SMART SM00842 3 189 8.5E-77 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 UPTC3659_RS07025 c87310417358be8a6a7d70ae14280db8 459 Pfam PF02491 SHS2 domain inserted in FTSA 77 154 4.3E-22 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 PANTHER PTHR23105 21 231 1.8E-80 T 23-04-2016 UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 Gene3D G3DSA:3.40.50.790 69 159 2.8E-41 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 SUPERFAMILY SSF56808 6 226 4.45E-81 T 23-04-2016 IPR023674 Ribosomal protein L1-like UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 Gene3D G3DSA:3.30.190.20 161 226 4.0E-44 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 Gene3D G3DSA:3.30.190.20 17 68 4.0E-44 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.492 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 PANTHER PTHR23105:SF5 21 231 1.8E-80 T 23-04-2016 UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 1.1E-56 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 9.0E-106 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS02345 311da03d69a396b1e6f400c11fd157f5 233 PIRSF PIRSF002155 1 227 6.3E-78 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 SUPERFAMILY SSF53218 170 312 4.45E-32 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 SUPERFAMILY SSF63882 2 169 1.44E-42 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 Gene3D G3DSA:2.170.190.11 46 123 5.3E-20 T 23-04-2016 UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 Pfam PF03453 MoeA N-terminal region (domain I and II) 4 161 1.5E-26 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 PANTHER PTHR10192 2 392 1.9E-87 T 23-04-2016 UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 Gene3D G3DSA:3.40.980.10 157 317 6.0E-47 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 Pfam PF00994 Probable molybdopterin binding domain 175 309 2.1E-17 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 PANTHER PTHR10192:SF5 2 392 1.9E-87 T 23-04-2016 UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 Gene3D G3DSA:3.90.105.10 124 156 9.3E-16 T 23-04-2016 UPTC3659_RS01835 d5e2354c143dd0a3a43a98013835d5b5 393 SMART SM00852 174 311 9.1E-29 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS01550 d7b687b016a649d1d031c0fccb71f8a8 258 Pfam PF01061 ABC-2 type transporter 5 218 2.1E-10 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 UPTC3659_RS01550 d7b687b016a649d1d031c0fccb71f8a8 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 138 162 5.3E-6 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 UPTC3659_RS01550 d7b687b016a649d1d031c0fccb71f8a8 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 25 46 5.3E-6 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 UPTC3659_RS01550 d7b687b016a649d1d031c0fccb71f8a8 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 195 214 5.3E-6 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 UPTC3659_RS01550 d7b687b016a649d1d031c0fccb71f8a8 258 PRINTS PR00164 ABC-2 type transport system membrane protein signature 175 194 5.3E-6 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 UPTC3659_RS03470 b4de588a24da83f0f05d716a4a5a22d7 250 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 246 1.3E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03470 b4de588a24da83f0f05d716a4a5a22d7 250 Gene3D G3DSA:1.10.3720.10 50 248 5.6E-47 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03470 b4de588a24da83f0f05d716a4a5a22d7 250 PANTHER PTHR30614 57 250 4.0E-68 T 23-04-2016 UPTC3659_RS03470 b4de588a24da83f0f05d716a4a5a22d7 250 SUPERFAMILY SSF161098 50 233 2.09E-41 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03470 b4de588a24da83f0f05d716a4a5a22d7 250 PANTHER PTHR30614:SF15 57 250 4.0E-68 T 23-04-2016 UPTC3659_RS03470 b4de588a24da83f0f05d716a4a5a22d7 250 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 49 142 2.7E-18 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 Gene3D G3DSA:3.40.50.2300 185 314 3.1E-25 T 23-04-2016 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 SUPERFAMILY SSF50341 12 163 3.53E-29 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 Gene3D G3DSA:2.40.50.180 62 99 3.5E-6 T 23-04-2016 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 PANTHER PTHR22617 33 176 8.1E-27 T 23-04-2016 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 SMART SM00448 182 305 2.7E-15 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 Pfam PF00072 Response regulator receiver domain 186 296 4.1E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 Pfam PF01584 CheW-like domain 28 162 3.6E-35 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 Gene3D G3DSA:2.30.30.40 100 147 1.0E-8 T 23-04-2016 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 SMART SM00260 11 160 2.2E-36 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 PIRSF PIRSF002867 1 313 1.7E-98 T 23-04-2016 IPR024181 Chemotaxis response regulator CheV UPTC3659_RS07925 6ca4a954096c8f214a7186086fca5122 317 SUPERFAMILY SSF52172 185 312 9.96E-23 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Gene3D G3DSA:2.20.25.90 33 91 4.9E-21 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Pfam PF01568 Molydopterin dinucleotide binding domain 810 918 1.4E-23 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 SUPERFAMILY SSF50692 791 924 8.36E-42 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 PANTHER PTHR11615 389 634 8.0E-293 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 PANTHER PTHR11615 1 296 8.0E-293 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 PANTHER PTHR11615 716 924 8.0E-293 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Gene3D G3DSA:3.40.228.10 362 443 2.0E-46 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Gene3D G3DSA:3.40.228.10 176 291 2.0E-46 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 29 5.8E-5 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Hamap MF_01630 Nitrate reductase [napA]. 1 924 28.19 T 23-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 36 88 5.5E-17 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Gene3D G3DSA:2.40.40.20 801 924 1.9E-44 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 1 924 0.0 T 23-04-2016 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 SMART SM00926 35 89 1.7E-14 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Pfam PF00384 Molybdopterin oxidoreductase 92 612 8.1E-74 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 SUPERFAMILY SSF53706 32 624 4.71E-170 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Gene3D G3DSA:3.40.50.740 444 619 5.0E-77 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Gene3D G3DSA:3.40.50.740 694 738 5.0E-77 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 Gene3D G3DSA:3.40.50.740 92 175 5.0E-77 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 40 57 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 PANTHER PTHR11615:SF123 389 634 8.0E-293 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 PANTHER PTHR11615:SF123 1 296 8.0E-293 T 23-04-2016 UPTC3659_RS06185 7381888c78c5b649a8e35f572558c08b 924 PANTHER PTHR11615:SF123 716 924 8.0E-293 T 23-04-2016 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 Gene3D G3DSA:3.50.50.60 2 226 1.8E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 1 616 38.347 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2 615 1.8E-256 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 Pfam PF01134 Glucose inhibited division protein A 3 393 3.0E-158 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 PANTHER PTHR11806 1 616 0.0 T 23-04-2016 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 PANTHER PTHR11806:SF0 1 616 0.0 T 23-04-2016 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 SMART SM01228 539 610 3.2E-36 T 23-04-2016 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 362 385 - T 23-04-2016 IPR020595 MnmG-related, conserved site UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 267 281 - T 23-04-2016 IPR020595 MnmG-related, conserved site UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 SUPERFAMILY SSF51905 92 252 6.06E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 SUPERFAMILY SSF51905 1 61 6.06E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS06600 f546bc2b9cd05474db499ef2527a14e4 616 Pfam PF13932 GidA associated domain 395 608 1.2E-59 T 23-04-2016 IPR026904 GidA associated domain 3 UPTC3659_RS06295 37bf394147ac56d07f50d7f91244b7c6 302 Gene3D G3DSA:2.70.70.10 143 262 2.6E-40 T 23-04-2016 UPTC3659_RS06295 37bf394147ac56d07f50d7f91244b7c6 302 PANTHER PTHR21666 144 271 5.7E-39 T 23-04-2016 UPTC3659_RS06295 37bf394147ac56d07f50d7f91244b7c6 302 SUPERFAMILY SSF51261 28 260 1.96E-51 T 23-04-2016 IPR011055 Duplicated hybrid motif UPTC3659_RS06295 37bf394147ac56d07f50d7f91244b7c6 302 Pfam PF01551 Peptidase family M23 161 253 1.1E-29 T 23-04-2016 IPR016047 Peptidase M23 UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 PANTHER PTHR30303 1 323 3.8E-125 T 23-04-2016 UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 Gene3D G3DSA:3.30.1330.10 41 141 5.2E-22 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 Gene3D G3DSA:3.90.650.10 154 301 4.0E-19 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 PIRSF PIRSF005644 1 323 1.6E-113 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 SUPERFAMILY SSF55326 4 142 1.15E-28 T 23-04-2016 UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 154 300 2.8E-22 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 36 142 4.8E-17 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 3 323 3.1E-125 T 23-04-2016 IPR011854 Hydrogenase expression/formation protein HypE UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 PANTHER PTHR30303:SF0 1 323 3.8E-125 T 23-04-2016 UPTC3659_RS04525 880353b86ed8d2f25427aef0536a64e9 323 SUPERFAMILY SSF56042 150 318 1.47E-35 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 SUPERFAMILY SSF48452 687 787 3.42E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 Gene3D G3DSA:1.25.40.10 457 511 1.2E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 SUPERFAMILY SSF48452 125 287 1.12E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 PANTHER PTHR23083 122 321 1.2E-26 T 23-04-2016 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 PANTHER PTHR23083 697 784 1.2E-26 T 23-04-2016 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 PANTHER PTHR23083 475 518 1.2E-26 T 23-04-2016 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 Gene3D G3DSA:1.25.40.10 693 784 2.2E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 SUPERFAMILY SSF48452 286 393 4.17E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 SUPERFAMILY SSF48452 458 511 4.17E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 Pfam PF07719 Tetratricopeptide repeat 477 508 3.3E-5 T 23-04-2016 IPR013105 Tetratricopeptide repeat 2 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 SMART SM00028 475 508 0.0015 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 SMART SM00028 154 187 7.8E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 SMART SM00028 724 757 390.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 SMART SM00028 188 221 170.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 SMART SM00028 288 321 0.15 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 Gene3D G3DSA:1.25.40.10 122 361 1.9E-26 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 Pfam PF13181 Tetratricopeptide repeat 158 185 0.014 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02835 e5c32b9daa2ac56e5927fce4803bef88 799 Pfam PF13181 Tetratricopeptide repeat 294 320 1.8E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 SMART SM00322 60 125 0.0011 T 23-04-2016 IPR004087 K Homology domain GO:0003676 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 SUPERFAMILY SSF54821 109 206 3.27E-39 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 SUPERFAMILY SSF54814 2 105 6.54E-35 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.7E-40 T 23-04-2016 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 Gene3D G3DSA:3.30.300.20 17 105 1.1E-29 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.048 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 Gene3D G3DSA:3.30.1140.32 110 207 4.8E-45 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 Pfam PF07650 KH domain 38 107 6.1E-17 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 PANTHER PTHR11760:SF19 2 223 4.0E-117 T 23-04-2016 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 PANTHER PTHR11760 2 223 4.0E-117 T 23-04-2016 UPTC3659_RS00415 885b5a3a7a5898d457e775df4a67c49b 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 9.3E-92 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS00350 20ad4d81f60bbe15fb07062874e049ae 329 SUPERFAMILY SSF56042 169 326 2.09E-44 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS00350 20ad4d81f60bbe15fb07062874e049ae 329 PANTHER PTHR10520 3 326 1.2E-159 T 23-04-2016 UPTC3659_RS00350 20ad4d81f60bbe15fb07062874e049ae 329 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 158 4.6E-13 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS00350 20ad4d81f60bbe15fb07062874e049ae 329 Gene3D G3DSA:3.30.1330.10 18 165 1.2E-54 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS00350 20ad4d81f60bbe15fb07062874e049ae 329 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 324 40.096 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS00350 20ad4d81f60bbe15fb07062874e049ae 329 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 320 2.6E-120 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS00350 20ad4d81f60bbe15fb07062874e049ae 329 SUPERFAMILY SSF55326 3 164 1.1E-45 T 23-04-2016 UPTC3659_RS00350 20ad4d81f60bbe15fb07062874e049ae 329 Gene3D G3DSA:3.90.650.10 171 325 2.3E-50 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS00350 20ad4d81f60bbe15fb07062874e049ae 329 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 323 9.3E-29 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS01485 cf8f087952c7ab81a6f88e244ad71127 120 PANTHER PTHR11803 5 119 2.4E-48 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family UPTC3659_RS01485 cf8f087952c7ab81a6f88e244ad71127 120 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 95 113 - T 23-04-2016 IPR019897 RidA, conserved site UPTC3659_RS01485 cf8f087952c7ab81a6f88e244ad71127 120 Gene3D G3DSA:3.30.1330.40 3 119 2.9E-44 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like UPTC3659_RS01485 cf8f087952c7ab81a6f88e244ad71127 120 Pfam PF01042 Endoribonuclease L-PSP 3 118 5.4E-40 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family UPTC3659_RS01485 cf8f087952c7ab81a6f88e244ad71127 120 SUPERFAMILY SSF55298 3 119 2.51E-41 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like UPTC3659_RS01485 cf8f087952c7ab81a6f88e244ad71127 120 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 118 3.2E-45 T 23-04-2016 IPR006056 RidA family UPTC3659_RS01485 cf8f087952c7ab81a6f88e244ad71127 120 PANTHER PTHR11803:SF15 5 119 2.4E-48 T 23-04-2016 UPTC3659_RS07820 51f7d5a2c3ef4c000cc403962419ddeb 387 PANTHER PTHR30008 3 339 2.1E-113 T 23-04-2016 UPTC3659_RS07820 51f7d5a2c3ef4c000cc403962419ddeb 387 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 2 385 5.6E-118 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 UPTC3659_RS07820 51f7d5a2c3ef4c000cc403962419ddeb 387 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 1 387 22.601 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 UPTC3659_RS07820 51f7d5a2c3ef4c000cc403962419ddeb 387 PANTHER PTHR30008:SF0 3 339 2.1E-113 T 23-04-2016 UPTC3659_RS07820 51f7d5a2c3ef4c000cc403962419ddeb 387 Pfam PF02601 Exonuclease VII, large subunit 117 358 1.3E-69 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 UPTC3659_RS07820 51f7d5a2c3ef4c000cc403962419ddeb 387 Pfam PF13742 OB-fold nucleic acid binding domain 1 94 1.7E-22 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 PANTHER PTHR32248 1 412 4.5E-58 T 23-04-2016 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 390 397 - T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 Pfam PF04963 Sigma-54 factor, core binding domain 83 247 2.0E-26 T 23-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 3 48 8.2E-14 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 PANTHER PTHR32248:SF4 1 412 4.5E-58 T 23-04-2016 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 409 8.2E-97 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 PRINTS PR00045 Sigma-54 factor signature 312 324 1.4E-13 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 PRINTS PR00045 Sigma-54 factor signature 385 403 1.4E-13 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 PRINTS PR00045 Sigma-54 factor signature 328 339 1.4E-13 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 PRINTS PR00045 Sigma-54 factor signature 146 163 1.4E-13 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 PIRSF PIRSF000774 1 412 5.6E-66 T 23-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS04340 3a4c35f469ad7dd51b4ea52bbcf2b497 415 Pfam PF04552 Sigma-54, DNA binding domain 255 410 9.4E-45 T 23-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding UPTC3659_RS03970 f29858f7481321780b72d4c017859527 200 Gene3D G3DSA:2.60.120.10 3 126 1.2E-31 T 23-04-2016 IPR014710 RmlC-like jelly roll fold UPTC3659_RS03970 f29858f7481321780b72d4c017859527 200 SUPERFAMILY SSF51206 3 127 2.23E-32 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like UPTC3659_RS03970 f29858f7481321780b72d4c017859527 200 SMART SM00419 140 189 0.0021 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UPTC3659_RS03970 f29858f7481321780b72d4c017859527 200 Gene3D G3DSA:1.10.10.10 148 198 1.6E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS03970 f29858f7481321780b72d4c017859527 200 SMART SM00100 1 117 6.0E-8 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain UPTC3659_RS03970 f29858f7481321780b72d4c017859527 200 Pfam PF13545 Crp-like helix-turn-helix domain 134 195 3.7E-11 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UPTC3659_RS03970 f29858f7481321780b72d4c017859527 200 Pfam PF00027 Cyclic nucleotide-binding domain 15 101 3.4E-20 T 23-04-2016 IPR000595 Cyclic nucleotide-binding domain UPTC3659_RS03970 f29858f7481321780b72d4c017859527 200 PANTHER PTHR24567 2 200 1.9E-35 T 23-04-2016 UPTC3659_RS03970 f29858f7481321780b72d4c017859527 200 SUPERFAMILY SSF46785 131 197 2.82E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS02820 5e46a3f0b410e5f88e63d7cd91b3e980 340 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 16 25 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 UPTC3659_RS02820 5e46a3f0b410e5f88e63d7cd91b3e980 340 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 336 9.0E-117 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 UPTC3659_RS02820 5e46a3f0b410e5f88e63d7cd91b3e980 340 SUPERFAMILY SSF51726 3 339 4.84E-104 T 23-04-2016 UPTC3659_RS02820 5e46a3f0b410e5f88e63d7cd91b3e980 340 PANTHER PTHR21091:SF2 11 340 3.6E-127 T 23-04-2016 UPTC3659_RS02820 5e46a3f0b410e5f88e63d7cd91b3e980 340 PANTHER PTHR21091 11 340 3.6E-127 T 23-04-2016 UPTC3659_RS02820 5e46a3f0b410e5f88e63d7cd91b3e980 340 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 3 336 5.4E-128 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 UPTC3659_RS02820 5e46a3f0b410e5f88e63d7cd91b3e980 340 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 136 152 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 UPTC3659_RS02820 5e46a3f0b410e5f88e63d7cd91b3e980 340 Gene3D G3DSA:3.20.20.210 3 338 3.9E-130 T 23-04-2016 UPTC3659_RS02820 5e46a3f0b410e5f88e63d7cd91b3e980 340 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 338 46.338 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 PANTHER PTHR32039:SF7 15 176 2.2E-154 T 23-04-2016 IPR004482 Mg chelatase-related protein UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 PANTHER PTHR32039:SF7 198 500 2.2E-154 T 23-04-2016 IPR004482 Mg chelatase-related protein UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 8 498 7.8E-130 T 23-04-2016 IPR004482 Mg chelatase-related protein UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 Gene3D G3DSA:3.40.50.300 196 394 3.0E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 SUPERFAMILY SSF54211 13 162 2.81E-22 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 Pfam PF01078 Magnesium chelatase, subunit ChlI 198 401 3.3E-71 T 23-04-2016 IPR000523 Magnesium chelatase ChlI domain UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 PANTHER PTHR32039 15 176 2.2E-154 T 23-04-2016 UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 PANTHER PTHR32039 198 500 2.2E-154 T 23-04-2016 UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 407 498 2.1E-24 T 23-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 Gene3D G3DSA:3.30.230.10 12 161 9.6E-22 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 Pfam PF13541 Subunit ChlI of Mg-chelatase 18 135 1.7E-35 T 23-04-2016 UPTC3659_RS08440 ea332b2e0bf9ffb3ce27e23e35229868 502 SUPERFAMILY SSF52540 196 499 6.0E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PANTHER PTHR33841 64 490 7.3E-91 T 23-04-2016 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PANTHER PTHR33841 579 1205 7.3E-91 T 23-04-2016 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PANTHER PTHR33841 508 555 7.3E-91 T 23-04-2016 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 Gene3D G3DSA:3.40.50.150 521 545 2.7E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 Gene3D G3DSA:3.40.50.150 604 661 2.7E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 Gene3D G3DSA:3.40.50.150 465 482 2.7E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 Gene3D G3DSA:3.40.50.150 805 935 2.7E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 816 822 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 463 479 2.1E-16 T 23-04-2016 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 847 871 2.1E-16 T 23-04-2016 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 813 825 2.1E-16 T 23-04-2016 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 525 539 2.1E-16 T 23-04-2016 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 Pfam PF12950 TaqI-like C-terminal specificity domain 1033 1190 4.2E-15 T 23-04-2016 IPR025931 TaqI-like C-terminal specificity domain UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 SUPERFAMILY SSF53335 302 378 1.15E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 SUPERFAMILY SSF53335 805 937 1.15E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 SUPERFAMILY SSF53335 596 663 1.15E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 SUPERFAMILY SSF53335 521 549 1.15E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 SUPERFAMILY SSF53335 415 482 1.15E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 Pfam PF07669 Eco57I restriction-modification methylase 813 922 6.0E-20 T 23-04-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PANTHER PTHR33841:SF1 64 490 7.3E-91 T 23-04-2016 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PANTHER PTHR33841:SF1 579 1205 7.3E-91 T 23-04-2016 UPTC3659_RS08355 d7bf3dc1a12936aca4308a572c864e88 1254 PANTHER PTHR33841:SF1 508 555 7.3E-91 T 23-04-2016 UPTC3659_RS08760 cdad5139f687b8eb2b00aa068892c3d0 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 186 19.917 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 UPTC3659_RS08760 cdad5139f687b8eb2b00aa068892c3d0 200 Gene3D G3DSA:3.90.550.10 7 187 2.7E-43 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS08760 cdad5139f687b8eb2b00aa068892c3d0 200 PANTHER PTHR19136 1 186 4.0E-25 T 23-04-2016 UPTC3659_RS08760 cdad5139f687b8eb2b00aa068892c3d0 200 PANTHER PTHR19136:SF81 1 186 4.0E-25 T 23-04-2016 UPTC3659_RS08760 cdad5139f687b8eb2b00aa068892c3d0 200 SUPERFAMILY SSF53448 7 185 5.87E-21 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS08760 cdad5139f687b8eb2b00aa068892c3d0 200 Pfam PF12804 MobA-like NTP transferase domain 9 151 9.7E-22 T 23-04-2016 IPR025877 MobA-like NTP transferase UPTC3659_RS08100 7a046213c7b1fc58ecb6e88455bf706d 153 SUPERFAMILY SSF52833 4 152 1.07E-50 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS08100 7a046213c7b1fc58ecb6e88455bf706d 153 Pfam PF00578 AhpC/TSA family 6 134 8.5E-41 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 UPTC3659_RS08100 7a046213c7b1fc58ecb6e88455bf706d 153 PIRSF PIRSF000239 1 143 4.5E-27 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 UPTC3659_RS08100 7a046213c7b1fc58ecb6e88455bf706d 153 PANTHER PTHR10681 1 139 9.9E-52 T 23-04-2016 UPTC3659_RS08100 7a046213c7b1fc58ecb6e88455bf706d 153 Gene3D G3DSA:3.40.30.10 2 152 6.1E-53 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS06580 df9ee288d2fb9bc5dd65f92e771b84c5 375 SUPERFAMILY SSF46626 89 207 6.88E-17 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS06580 df9ee288d2fb9bc5dd65f92e771b84c5 375 Gene3D G3DSA:1.10.760.10 246 338 1.3E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS06580 df9ee288d2fb9bc5dd65f92e771b84c5 375 Gene3D G3DSA:1.10.760.10 100 205 4.4E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS06580 df9ee288d2fb9bc5dd65f92e771b84c5 375 PIRSF PIRSF019225 1 375 5.5E-203 T 23-04-2016 IPR021195 Ubiquinol cytochrome c reductase, cytochrome c1 subunit, predicted UPTC3659_RS06580 df9ee288d2fb9bc5dd65f92e771b84c5 375 Gene3D G3DSA:1.20.5.100 341 375 1.0E-8 T 23-04-2016 UPTC3659_RS06580 df9ee288d2fb9bc5dd65f92e771b84c5 375 SUPERFAMILY SSF46626 249 360 6.51E-20 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS06580 df9ee288d2fb9bc5dd65f92e771b84c5 375 Pfam PF00034 Cytochrome c 105 205 1.2E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 87 101 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 PANTHER PTHR11609:SF2 4 235 1.0E-109 T 23-04-2016 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 PANTHER PTHR11609 4 235 1.0E-109 T 23-04-2016 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 SUPERFAMILY SSF56104 4 235 1.01E-79 T 23-04-2016 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 236 3.6E-74 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 5 237 31.547 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 Gene3D G3DSA:3.30.470.20 95 223 2.6E-50 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 175 183 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 Gene3D G3DSA:3.30.200.20 7 94 2.4E-36 T 23-04-2016 UPTC3659_RS04085 60395c4ea84d0449c7aefdbba571f807 237 Pfam PF01259 SAICAR synthetase 7 234 2.4E-64 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 PANTHER PTHR32154:SF0 3 1184 0.0 T 23-04-2016 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Gene3D G3DSA:3.40.50.970 3 258 3.9E-110 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 SUPERFAMILY SSF54862 671 837 3.35E-17 T 23-04-2016 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 SMART SM00890 624 682 1.6E-24 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 247 8.9E-77 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 750 761 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 692 703 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Gene3D G3DSA:3.30.70.20 675 775 5.7E-19 T 23-04-2016 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 SUPERFAMILY SSF53323 416 662 2.88E-80 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Pfam PF12838 4Fe-4S dicluster domain 692 762 3.5E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 7.6E-31 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 963 1074 1.2E-9 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Gene3D G3DSA:3.40.50.970 795 1177 6.6E-143 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 PIRSF PIRSF000159 1 1184 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 SUPERFAMILY SSF52922 260 411 1.88E-44 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 PANTHER PTHR32154 3 1184 0.0 T 23-04-2016 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Gene3D G3DSA:3.40.920.10 416 623 1.3E-84 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Pfam PF10371 Domain of unknown function 627 680 6.0E-20 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Gene3D G3DSA:4.10.780.10 637 671 2.6E-14 T 23-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 SUPERFAMILY SSF52518 794 1180 8.83E-119 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Gene3D G3DSA:3.40.50.920 259 413 1.4E-59 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 SUPERFAMILY SSF52518 5 258 5.3E-76 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1176 0.0 T 23-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 UPTC3659_RS02035 5159fd125fc31b341023d0d94c1737e0 1184 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 270 369 8.7E-15 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 50 67 - T 23-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 Gene3D G3DSA:2.40.100.10 7 149 4.8E-47 T 23-04-2016 IPR029000 Cyclophilin-like domain UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 SUPERFAMILY SSF50891 12 150 4.82E-46 T 23-04-2016 IPR029000 Cyclophilin-like domain UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 PANTHER PTHR11071 5 145 1.2E-42 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 29 44 6.7E-23 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 95 110 6.7E-23 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 138 6.7E-23 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 55 67 6.7E-23 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 122 6.7E-23 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 PIRSF PIRSF001467 2 160 1.8E-39 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 UPTC3659_RS06510 57a2309590dda546eaec49acd54874b2 160 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 150 5.2E-38 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 UPTC3659_RS05855 5020906c6d81e714f015c89ff7780353 175 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 175 1.7E-53 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 UPTC3659_RS05855 5020906c6d81e714f015c89ff7780353 175 Hamap MF_00984 Single-stranded DNA-binding protein. 2 109 32.365 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 UPTC3659_RS05855 5020906c6d81e714f015c89ff7780353 175 Gene3D G3DSA:2.40.50.140 1 129 4.9E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS05855 5020906c6d81e714f015c89ff7780353 175 PANTHER PTHR10302:SF0 1 170 1.4E-31 T 23-04-2016 UPTC3659_RS05855 5020906c6d81e714f015c89ff7780353 175 PIRSF PIRSF002070 1 169 8.7E-31 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 UPTC3659_RS05855 5020906c6d81e714f015c89ff7780353 175 PANTHER PTHR10302 1 170 1.4E-31 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 UPTC3659_RS05855 5020906c6d81e714f015c89ff7780353 175 Pfam PF00436 Single-strand binding protein family 2 105 8.3E-35 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 UPTC3659_RS05855 5020906c6d81e714f015c89ff7780353 175 SUPERFAMILY SSF50249 1 175 9.94E-49 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 Gene3D G3DSA:3.40.140.20 356 500 1.8E-49 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 510 38.088 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 Pfam PF02142 MGS-like domain 12 125 1.4E-24 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 Gene3D G3DSA:3.40.140.20 234 346 1.1E-35 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 510 2.0E-164 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 PIRSF PIRSF000414 1 510 1.8E-191 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 PANTHER PTHR11692:SF2 1 510 1.1E-223 T 23-04-2016 UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 SUPERFAMILY SSF53927 203 510 5.62E-107 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 SMART SM00851 12 126 3.0E-50 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 PANTHER PTHR11692 1 510 1.1E-223 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 Gene3D G3DSA:3.40.50.1380 2 182 6.7E-75 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 132 441 2.4E-93 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 SUPERFAMILY SSF52335 2 190 3.66E-64 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain UPTC3659_RS02900 7f9e6cea6e841b9681f4ba17e470a272 510 SMART SM00798 131 442 4.2E-142 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 UPTC3659_RS06745 f0e6ce3774f9c3860fbf0a577f58a9af 186 Gene3D G3DSA:3.40.50.150 7 177 1.5E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS06745 f0e6ce3774f9c3860fbf0a577f58a9af 186 Pfam PF02527 rRNA small subunit methyltransferase G 11 166 4.1E-38 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 UPTC3659_RS06745 f0e6ce3774f9c3860fbf0a577f58a9af 186 PIRSF PIRSF003078 1 183 3.1E-39 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 UPTC3659_RS06745 f0e6ce3774f9c3860fbf0a577f58a9af 186 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 15 164 4.9E-41 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 UPTC3659_RS06745 f0e6ce3774f9c3860fbf0a577f58a9af 186 SUPERFAMILY SSF53335 8 166 3.18E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS06745 f0e6ce3774f9c3860fbf0a577f58a9af 186 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 3 179 19.205 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 UPTC3659_RS06745 f0e6ce3774f9c3860fbf0a577f58a9af 186 PANTHER PTHR31760:SF0 7 166 4.2E-26 T 23-04-2016 UPTC3659_RS06745 f0e6ce3774f9c3860fbf0a577f58a9af 186 PANTHER PTHR31760 7 166 4.2E-26 T 23-04-2016 UPTC3659_RS01890 fa934242baab46ee5e6f11b4233370bb 242 Gene3D G3DSA:1.10.10.10 122 236 1.2E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01890 fa934242baab46ee5e6f11b4233370bb 242 SUPERFAMILY SSF46785 125 231 3.47E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01890 fa934242baab46ee5e6f11b4233370bb 242 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 148 205 2.4E-10 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UPTC3659_RS01890 fa934242baab46ee5e6f11b4233370bb 242 PANTHER PTHR30432 113 238 3.5E-17 T 23-04-2016 UPTC3659_RS01175 ede28384d94dbdf612d837bee877a678 134 SUPERFAMILY SSF53067 2 80 4.34E-11 T 23-04-2016 UPTC3659_RS01175 ede28384d94dbdf612d837bee877a678 134 Gene3D G3DSA:3.30.420.40 17 79 1.6E-5 T 23-04-2016 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 SUPERFAMILY SSF53671 1 288 8.25E-89 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 Gene3D G3DSA:3.40.50.1370 136 267 2.3E-41 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 291 38.279 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 140 1.5E-41 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 2.0E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 2.0E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 277 2.0E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 242 251 2.0E-19 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 Gene3D G3DSA:3.40.50.1370 1 135 8.8E-49 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 286 1.2E-24 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PANTHER PTHR11405 1 291 5.1E-107 T 23-04-2016 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 289 1.1E-97 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 1.6E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 1.6E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 1.6E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00101 Aspartate carbamoyltransferase signature 246 251 1.6E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 284 1.6E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PRINTS PR00101 Aspartate carbamoyltransferase signature 207 216 1.6E-29 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS06355 a41f2146ba899548cc02538e1b114022 292 PANTHER PTHR11405:SF16 1 291 5.1E-107 T 23-04-2016 UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 Pfam PF07549 SecD/SecF GG Motif 32 59 1.0E-12 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 Pfam PF02355 Protein export membrane protein 109 291 2.6E-64 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 26.566 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 9.8E-79 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 SUPERFAMILY SSF82866 115 291 4.58E-36 T 23-04-2016 UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 3.3E-29 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 3.3E-29 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 3.3E-29 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 3.3E-29 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 116 280 2.8E-51 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 Gene3D G3DSA:1.20.1640.10 132 291 6.7E-25 T 23-04-2016 UPTC3659_RS06325 d0978f304c0bcaa7e8f4b9f2db66291c 323 PANTHER PTHR30081 1 322 2.1E-69 T 23-04-2016 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 Gene3D G3DSA:3.40.50.170 3 202 6.5E-55 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 Pfam PF02911 Formyl transferase, C-terminal domain 201 294 4.3E-18 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 299 1.9E-76 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 SUPERFAMILY SSF53328 3 201 1.15E-51 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 Pfam PF00551 Formyl transferase 3 163 2.8E-36 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 SUPERFAMILY SSF50486 202 302 8.83E-19 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 297 29.691 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 PANTHER PTHR11138 2 302 3.3E-81 T 23-04-2016 UPTC3659_RS01010 7fdda20dbcd01c386c6cff5d40680d0a 303 Gene3D G3DSA:3.10.25.10 205 302 3.6E-19 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 SMART SM01360 1119 1208 7.9E-19 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 909 1050 1.4E-14 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 Gene3D G3DSA:1.50.10.20 1318 1559 1.2E-17 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 PANTHER PTHR40094:SF1 30 1761 2.1E-49 T 23-04-2016 UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 PANTHER PTHR40094 30 1761 2.1E-49 T 23-04-2016 UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 SUPERFAMILY SSF48239 1317 1558 2.48E-27 T 23-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 Pfam PF00207 Alpha-2-macroglobulin family 1120 1207 1.7E-7 T 23-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 455 546 4.1E-14 T 23-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 Pfam PF01835 MG2 domain 554 632 2.4E-9 T 23-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 UPTC3659_RS08565 96b34b5d376549c3db9b9ba0bedf1031 1761 SMART SM01359 909 1051 2.2E-26 T 23-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 UPTC3659_RS04530 643d5172b2a1601a22fa92a6984eadcf 363 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 4 361 1.4E-147 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 UPTC3659_RS04530 643d5172b2a1601a22fa92a6984eadcf 363 Pfam PF01924 Hydrogenase formation hypA family 18 358 2.4E-145 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 UPTC3659_RS04530 643d5172b2a1601a22fa92a6984eadcf 363 PANTHER PTHR30149 2 360 5.7E-178 T 23-04-2016 UPTC3659_RS04530 643d5172b2a1601a22fa92a6984eadcf 363 PIRSF PIRSF005622 1 363 1.7E-154 T 23-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 UPTC3659_RS04530 643d5172b2a1601a22fa92a6984eadcf 363 PANTHER PTHR30149:SF0 2 360 5.7E-178 T 23-04-2016 UPTC3659_RS03190 5e55b87a37ee43526b4c4ed73bb691ae 403 Pfam PF13356 Domain of unknown function (DUF4102) 3 86 1.8E-9 T 23-04-2016 IPR025166 Domain of unknown function DUF4102 UPTC3659_RS03190 5e55b87a37ee43526b4c4ed73bb691ae 403 Pfam PF00589 Phage integrase family 208 378 4.3E-10 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UPTC3659_RS03190 5e55b87a37ee43526b4c4ed73bb691ae 403 SUPERFAMILY SSF56349 91 387 1.5E-35 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UPTC3659_RS03190 5e55b87a37ee43526b4c4ed73bb691ae 403 PANTHER PTHR30629 1 397 2.2E-38 T 23-04-2016 UPTC3659_RS03190 5e55b87a37ee43526b4c4ed73bb691ae 403 Gene3D G3DSA:1.10.443.10 210 385 1.2E-13 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 UPTC3659_RS03190 5e55b87a37ee43526b4c4ed73bb691ae 403 Gene3D G3DSA:1.10.150.130 91 187 1.9E-6 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal UPTC3659_RS07135 abfb214b14ca239e65e9a649fb2804d6 278 Pfam PF02401 LytB protein 3 272 2.7E-88 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 UPTC3659_RS07135 abfb214b14ca239e65e9a649fb2804d6 278 PANTHER PTHR30426 1 274 2.5E-101 T 23-04-2016 UPTC3659_RS07135 abfb214b14ca239e65e9a649fb2804d6 278 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 275 31.453 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 UPTC3659_RS07135 abfb214b14ca239e65e9a649fb2804d6 278 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 273 8.5E-100 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 Gene3D G3DSA:3.10.290.10 332 398 8.1E-24 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 SUPERFAMILY SSF52374 4 317 5.63E-89 T 23-04-2016 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 55 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 PANTHER PTHR11766:SF1 1 400 1.9E-194 T 23-04-2016 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 Pfam PF00579 tRNA synthetases class I (W and Y) 34 321 3.3E-77 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 Pfam PF01479 S4 domain 340 384 4.3E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 SMART SM00363 339 400 1.9E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 1 399 44.817 T 23-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 5 399 3.5E-119 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 Gene3D G3DSA:1.10.240.10 232 331 2.5E-34 T 23-04-2016 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 SUPERFAMILY SSF55174 302 398 1.44E-18 T 23-04-2016 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 Gene3D G3DSA:3.40.50.620 10 231 9.1E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 PANTHER PTHR11766 1 400 1.9E-194 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 2.5E-21 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 2.5E-21 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 2.5E-21 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 UPTC3659_RS03565 e3203a4d2e7dc7d9a13228aa14fa7ef9 400 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 49 71 2.5E-21 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 UPTC3659_RS05670 ed67a049d450f3c4fdc0c7e30d76f03c 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 372 7.0E-52 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 UPTC3659_RS05670 ed67a049d450f3c4fdc0c7e30d76f03c 377 PANTHER PTHR30572 2 372 7.7E-70 T 23-04-2016 UPTC3659_RS05670 ed67a049d450f3c4fdc0c7e30d76f03c 377 PANTHER PTHR30572:SF3 2 372 7.7E-70 T 23-04-2016 UPTC3659_RS05670 ed67a049d450f3c4fdc0c7e30d76f03c 377 SUPERFAMILY SSF111369 43 252 2.88E-23 T 23-04-2016 UPTC3659_RS05670 ed67a049d450f3c4fdc0c7e30d76f03c 377 Gene3D G3DSA:2.40.50.100 56 89 2.2E-19 T 23-04-2016 UPTC3659_RS05670 ed67a049d450f3c4fdc0c7e30d76f03c 377 Gene3D G3DSA:2.40.50.100 178 210 2.2E-19 T 23-04-2016 UPTC3659_RS05670 ed67a049d450f3c4fdc0c7e30d76f03c 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 260 1.5E-17 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain UPTC3659_RS06850 3e593ab9be7b6a2197e493ec283f4382 253 SUPERFAMILY SSF110399 3 237 1.7E-69 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 UPTC3659_RS06850 3e593ab9be7b6a2197e493ec283f4382 253 PANTHER PTHR34266 1 251 3.5E-113 T 23-04-2016 UPTC3659_RS06850 3e593ab9be7b6a2197e493ec283f4382 253 Gene3D G3DSA:3.20.20.70 4 239 1.8E-45 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS06850 3e593ab9be7b6a2197e493ec283f4382 253 Pfam PF05690 Thiazole biosynthesis protein ThiG 5 246 3.6E-94 T 23-04-2016 UPTC3659_RS00270 8bfe307f7f79acfeaac8c3e7e1c59d43 277 Gene3D G3DSA:3.40.50.1980 176 277 1.3E-26 T 23-04-2016 UPTC3659_RS00270 8bfe307f7f79acfeaac8c3e7e1c59d43 277 Gene3D G3DSA:3.40.50.1980 20 174 5.7E-42 T 23-04-2016 UPTC3659_RS00270 8bfe307f7f79acfeaac8c3e7e1c59d43 277 PANTHER PTHR30477 1 273 1.9E-61 T 23-04-2016 UPTC3659_RS00270 8bfe307f7f79acfeaac8c3e7e1c59d43 277 Pfam PF01297 Zinc-uptake complex component A periplasmic 20 259 8.2E-55 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 UPTC3659_RS00270 8bfe307f7f79acfeaac8c3e7e1c59d43 277 PANTHER PTHR30477:SF1 1 273 1.9E-61 T 23-04-2016 UPTC3659_RS00270 8bfe307f7f79acfeaac8c3e7e1c59d43 277 SUPERFAMILY SSF53807 19 276 1.28E-72 T 23-04-2016 UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 Pfam PF16326 ABC transporter C-terminal domain 572 634 7.3E-9 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 Pfam PF00005 ABC transporter 19 188 2.3E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 Pfam PF00005 ABC transporter 348 481 2.8E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 SMART SM00382 28 235 4.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 SMART SM00382 356 531 9.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 Pfam PF12848 ABC transporter 227 299 2.0E-9 T 23-04-2016 IPR032781 ABC-transporter extension domain UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 Gene3D G3DSA:3.40.50.300 329 552 2.0E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 SUPERFAMILY SSF52540 10 241 8.37E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 Gene3D G3DSA:3.40.50.300 7 99 9.7E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 Gene3D G3DSA:3.40.50.300 137 283 9.7E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 PANTHER PTHR19211 4 580 5.9E-149 T 23-04-2016 UPTC3659_RS03050 de8df181c00f56615200bee5acd376cf 643 SUPERFAMILY SSF52540 321 526 2.24E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06040 85fbebd0d39cc18b8c5f8491faa62d80 109 SUPERFAMILY SSF52833 1 102 1.11E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS06040 85fbebd0d39cc18b8c5f8491faa62d80 109 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 100 9.1E-23 T 23-04-2016 IPR006504 Transcriptional regulator Spx/MgsR UPTC3659_RS06040 85fbebd0d39cc18b8c5f8491faa62d80 109 PANTHER PTHR30041 1 102 1.4E-20 T 23-04-2016 UPTC3659_RS06040 85fbebd0d39cc18b8c5f8491faa62d80 109 Gene3D G3DSA:3.40.30.10 1 103 2.6E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS06040 85fbebd0d39cc18b8c5f8491faa62d80 109 Pfam PF03960 ArsC family 5 102 4.7E-12 T 23-04-2016 IPR006660 Arsenate reductase-like UPTC3659_RS06040 85fbebd0d39cc18b8c5f8491faa62d80 109 PANTHER PTHR30041:SF3 1 102 1.4E-20 T 23-04-2016 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 5.4E-40 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 27.996 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.1E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.1E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.1E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 SUPERFAMILY SSF110324 2 83 1.85E-33 T 23-04-2016 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 PANTHER PTHR15893 1 84 6.9E-47 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 Pfam PF01016 Ribosomal L27 protein 2 81 1.3E-37 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 Gene3D G3DSA:2.40.50.100 20 83 6.6E-33 T 23-04-2016 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 1.0E-16 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00995 04b20bd380b6e6ff1f6353fa76eb2555 84 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 72 1.4E-12 T 23-04-2016 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 205 216 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 Gene3D G3DSA:3.10.20.30 6 70 3.1E-5 T 23-04-2016 IPR012675 Beta-grasp domain UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 PANTHER PTHR11615:SF38 2 243 7.6E-48 T 23-04-2016 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 SUPERFAMILY SSF53706 518 658 1.19E-10 T 23-04-2016 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 SUPERFAMILY SSF53706 232 445 1.19E-10 T 23-04-2016 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 PANTHER PTHR11615 2 243 7.6E-48 T 23-04-2016 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 Gene3D G3DSA:3.30.70.20 126 220 1.3E-10 T 23-04-2016 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 SUPERFAMILY SSF54292 2 120 5.32E-26 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 SUPERFAMILY SSF54862 131 221 1.05E-11 T 23-04-2016 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 80 116 1.2E-11 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 SMART SM00929 80 120 1.5E-12 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 UPTC3659_RS08280 c58b8c92980e378be052d0f071011e0f 817 Pfam PF00037 4Fe-4S binding domain 202 220 5.7E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 Gene3D G3DSA:4.10.640.10 9 76 1.5E-27 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 PANTHER PTHR13479 1 72 6.8E-21 T 23-04-2016 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 1 74 18.82 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 73 6.0E-34 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 4.2E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 4.2E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 4.2E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 4.2E-15 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 Pfam PF01084 Ribosomal protein S18 19 69 2.9E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 74 6.0E-25 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05860 f5a66231121e2e101b87861aff3201df 86 SUPERFAMILY SSF46911 4 75 1.12E-23 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 22.884 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 SUPERFAMILY SSF55658 1 55 3.14E-17 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 1.3E-39 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 2.4E-20 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 Gene3D G3DSA:3.40.5.10 1 52 7.0E-23 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 PANTHER PTHR21368 1 144 5.0E-32 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 SUPERFAMILY SSF55653 61 146 1.07E-19 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.8E-20 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 Gene3D G3DSA:3.10.430.100 62 147 6.4E-22 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal UPTC3659_RS04365 52e93ec0e0d1256f4f980528aabce0c3 147 PANTHER PTHR21368:SF18 1 144 5.0E-32 T 23-04-2016 UPTC3659_RS03550 291b4cf946733916008d20e487f163fd 239 Gene3D G3DSA:3.40.1160.10 2 231 2.6E-75 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 UPTC3659_RS03550 291b4cf946733916008d20e487f163fd 239 PANTHER PTHR21499:SF23 6 229 5.9E-96 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 UPTC3659_RS03550 291b4cf946733916008d20e487f163fd 239 PANTHER PTHR21499 6 229 5.9E-96 T 23-04-2016 UPTC3659_RS03550 291b4cf946733916008d20e487f163fd 239 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 238 41.484 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 UPTC3659_RS03550 291b4cf946733916008d20e487f163fd 239 SUPERFAMILY SSF53633 4 230 3.8E-65 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 UPTC3659_RS03550 291b4cf946733916008d20e487f163fd 239 PIRSF PIRSF005650 1 239 6.5E-86 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 UPTC3659_RS03550 291b4cf946733916008d20e487f163fd 239 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 232 2.2E-94 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 UPTC3659_RS03550 291b4cf946733916008d20e487f163fd 239 Pfam PF00696 Amino acid kinase family 6 216 8.2E-31 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 2 395 2.0E-160 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 1 396 41.244 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 SUPERFAMILY SSF51419 11 267 2.47E-79 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 Gene3D G3DSA:2.40.37.10 252 396 4.7E-48 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PANTHER PTHR11482 1 401 1.2E-152 T 23-04-2016 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 211 226 - T 23-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 363 385 4.6E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 149 158 4.6E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 283 301 4.6E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PRINTS PR01181 Diaminopimelate decarboxylase signature 60 77 4.6E-26 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 20 266 1.4E-62 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 271 369 6.0E-16 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PANTHER PTHR11482:SF5 1 401 1.2E-152 T 23-04-2016 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 SUPERFAMILY SSF50621 240 395 2.51E-49 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 175 188 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 42 60 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 62 74 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 255 274 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 353 366 1.5E-25 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS07875 453a1ce9672c5f51e9d40770dffbcfd8 401 Gene3D G3DSA:3.20.20.10 20 251 1.4E-77 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS01845 fcfad76ccd44c0419a45fd52362a3fa4 73 SUPERFAMILY SSF54285 1 73 4.22E-12 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp UPTC3659_RS01845 fcfad76ccd44c0419a45fd52362a3fa4 73 Gene3D G3DSA:3.10.20.30 9 73 3.8E-11 T 23-04-2016 IPR012675 Beta-grasp domain UPTC3659_RS01845 fcfad76ccd44c0419a45fd52362a3fa4 73 Pfam PF02597 ThiS family 5 73 6.5E-12 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 UPTC3659_RS05750 eaea70dc25b7a9be89380a398d5312b4 147 PANTHER PTHR28055:SF1 1 147 6.8E-41 T 23-04-2016 UPTC3659_RS05750 eaea70dc25b7a9be89380a398d5312b4 147 PANTHER PTHR28055 1 147 6.8E-41 T 23-04-2016 UPTC3659_RS05750 eaea70dc25b7a9be89380a398d5312b4 147 Gene3D G3DSA:1.10.10.410 91 147 2.1E-12 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal UPTC3659_RS05750 eaea70dc25b7a9be89380a398d5312b4 147 SUPERFAMILY SSF89095 1 146 7.32E-33 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 UPTC3659_RS05750 eaea70dc25b7a9be89380a398d5312b4 147 Pfam PF09424 Yqey-like protein 4 146 3.5E-39 T 23-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial UPTC3659_RS05750 eaea70dc25b7a9be89380a398d5312b4 147 Gene3D G3DSA:1.10.1510.10 1 90 7.6E-28 T 23-04-2016 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 SMART SM00998 365 444 3.8E-27 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.5E-19 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 2.5E-19 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 2.5E-19 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 2.5E-19 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 Gene3D G3DSA:1.20.200.10 105 372 1.7E-79 T 23-04-2016 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 SUPERFAMILY SSF48557 10 448 2.83E-111 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 2.8E-6 T 23-04-2016 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 2.8E-6 T 23-04-2016 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 2.8E-6 T 23-04-2016 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.8E-6 T 23-04-2016 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 Gene3D G3DSA:1.10.275.10 5 104 2.2E-33 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 15 443 3.2E-107 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PANTHER PTHR11444 1 454 6.3E-129 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 PANTHER PTHR11444:SF21 1 454 6.3E-129 T 23-04-2016 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 Pfam PF10397 Adenylosuccinate lyase C-terminus 366 443 1.9E-17 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 Pfam PF00206 Lyase 16 296 9.9E-44 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 UPTC3659_RS01500 dbf5547aa3bda7566ab8e1dfcbaa5981 454 Gene3D G3DSA:1.10.40.30 373 444 3.1E-25 T 23-04-2016 UPTC3659_RS01230 19e5ce99df43907e43faef77e1ad0ab6 160 Pfam PF01220 Dehydroquinase class II 2 136 7.9E-57 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 UPTC3659_RS01230 19e5ce99df43907e43faef77e1ad0ab6 160 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 136 2.0E-73 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 UPTC3659_RS01230 19e5ce99df43907e43faef77e1ad0ab6 160 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 23-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 UPTC3659_RS01230 19e5ce99df43907e43faef77e1ad0ab6 160 SUPERFAMILY SSF52304 1 150 3.14E-59 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 UPTC3659_RS01230 19e5ce99df43907e43faef77e1ad0ab6 160 PANTHER PTHR21272 1 148 1.0E-77 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 UPTC3659_RS01230 19e5ce99df43907e43faef77e1ad0ab6 160 Gene3D G3DSA:3.40.50.9100 1 143 1.0E-60 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 UPTC3659_RS01230 19e5ce99df43907e43faef77e1ad0ab6 160 PIRSF PIRSF001399 1 145 5.0E-59 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 UPTC3659_RS01230 19e5ce99df43907e43faef77e1ad0ab6 160 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 2 140 2.4E-66 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 UPTC3659_RS01230 19e5ce99df43907e43faef77e1ad0ab6 160 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 160 67.045 T 23-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 UPTC3659_RS03605 6ccb70cb2884379dbab8d4a83a039970 176 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 175 4.7E-45 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 UPTC3659_RS03605 6ccb70cb2884379dbab8d4a83a039970 176 PANTHER PTHR14269 1 173 2.5E-37 T 23-04-2016 UPTC3659_RS03605 6ccb70cb2884379dbab8d4a83a039970 176 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 52 74 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UPTC3659_RS03605 6ccb70cb2884379dbab8d4a83a039970 176 PIRSF PIRSF000847 1 176 1.7E-45 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 UPTC3659_RS03605 6ccb70cb2884379dbab8d4a83a039970 176 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 74 2.3E-16 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UPTC3659_RS06650 c62ab42e11ab1221569bbb740a0d0294 145 SUPERFAMILY SSF46626 18 118 5.08E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS06650 c62ab42e11ab1221569bbb740a0d0294 145 Pfam PF00034 Cytochrome c 37 117 6.7E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS06650 c62ab42e11ab1221569bbb740a0d0294 145 Gene3D G3DSA:1.10.760.10 35 119 3.6E-13 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00055 f69639ddea490ff30dc0e8a2238e3115 127 PIRSF PIRSF027377 1 126 5.6E-49 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS00055 f69639ddea490ff30dc0e8a2238e3115 127 PANTHER PTHR34354 1 127 1.5E-38 T 23-04-2016 UPTC3659_RS00055 f69639ddea490ff30dc0e8a2238e3115 127 Gene3D G3DSA:3.30.1130.10 14 121 1.6E-33 T 23-04-2016 UPTC3659_RS00055 f69639ddea490ff30dc0e8a2238e3115 127 SUPERFAMILY SSF55620 13 115 3.26E-30 T 23-04-2016 UPTC3659_RS00055 f69639ddea490ff30dc0e8a2238e3115 127 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 14 120 3.4E-37 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS00055 f69639ddea490ff30dc0e8a2238e3115 127 PANTHER PTHR34354:SF1 1 127 1.5E-38 T 23-04-2016 UPTC3659_RS00055 f69639ddea490ff30dc0e8a2238e3115 127 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 127 43.286 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS00055 f69639ddea490ff30dc0e8a2238e3115 127 Pfam PF14489 QueF-like protein 46 121 1.2E-30 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS07765 caa9d1471466dd0706cfd0cc3169244d 327 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 321 1.9E-129 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 UPTC3659_RS07765 caa9d1471466dd0706cfd0cc3169244d 327 PANTHER PTHR34069:SF2 2 327 1.4E-119 T 23-04-2016 UPTC3659_RS07765 caa9d1471466dd0706cfd0cc3169244d 327 Gene3D G3DSA:3.40.47.10 2 163 9.4E-59 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS07765 caa9d1471466dd0706cfd0cc3169244d 327 Gene3D G3DSA:3.40.47.10 164 322 1.5E-49 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS07765 caa9d1471466dd0706cfd0cc3169244d 327 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 320 2.5E-35 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 UPTC3659_RS07765 caa9d1471466dd0706cfd0cc3169244d 327 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 6.3E-29 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 UPTC3659_RS07765 caa9d1471466dd0706cfd0cc3169244d 327 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 321 67.788 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 UPTC3659_RS07765 caa9d1471466dd0706cfd0cc3169244d 327 PANTHER PTHR34069 2 327 1.4E-119 T 23-04-2016 UPTC3659_RS07765 caa9d1471466dd0706cfd0cc3169244d 327 SUPERFAMILY SSF53901 9 321 5.46E-64 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS01895 82c7f0137aaa1a6d894965cd78f9e4cf 192 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 3 192 4.7E-61 T 23-04-2016 IPR019870 Selenium metabolism protein YedF UPTC3659_RS01895 82c7f0137aaa1a6d894965cd78f9e4cf 192 Gene3D G3DSA:3.40.1260.10 116 174 4.2E-7 T 23-04-2016 IPR027396 DsrEFH-like UPTC3659_RS01895 82c7f0137aaa1a6d894965cd78f9e4cf 192 Pfam PF01206 Sulfurtransferase TusA 2 67 2.5E-18 T 23-04-2016 IPR001455 TusA-like domain UPTC3659_RS01895 82c7f0137aaa1a6d894965cd78f9e4cf 192 PANTHER PTHR33279:SF3 1 190 1.4E-34 T 23-04-2016 UPTC3659_RS01895 82c7f0137aaa1a6d894965cd78f9e4cf 192 PANTHER PTHR33279 1 190 1.4E-34 T 23-04-2016 UPTC3659_RS01895 82c7f0137aaa1a6d894965cd78f9e4cf 192 SUPERFAMILY SSF64307 2 69 6.67E-17 T 23-04-2016 IPR001455 TusA-like domain UPTC3659_RS01895 82c7f0137aaa1a6d894965cd78f9e4cf 192 Gene3D G3DSA:3.30.110.40 2 69 1.1E-16 T 23-04-2016 IPR001455 TusA-like domain UPTC3659_RS01895 82c7f0137aaa1a6d894965cd78f9e4cf 192 SUPERFAMILY SSF75169 98 180 1.18E-7 T 23-04-2016 IPR027396 DsrEFH-like UPTC3659_RS02080 beb620684abb13aa2376af37f0614820 144 SUPERFAMILY SSF140566 4 117 5.36E-5 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 UPTC3659_RS02080 beb620684abb13aa2376af37f0614820 144 Pfam PF05130 FlgN protein 3 133 4.2E-12 T 23-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 SUPERFAMILY SSF55920 1 251 7.46E-73 T 23-04-2016 IPR000994 Peptidase M24, structural domain UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 Hamap MF_01974 Methionine aminopeptidase [map]. 2 251 32.865 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 251 6.2E-88 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 Pfam PF00557 Metallopeptidase family M24 11 241 4.7E-44 T 23-04-2016 IPR000994 Peptidase M24, structural domain UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.3E-19 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.3E-19 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.3E-19 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 1.3E-19 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 PANTHER PTHR10804:SF41 1 251 5.0E-78 T 23-04-2016 UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 Gene3D G3DSA:3.90.230.10 1 251 7.6E-74 T 23-04-2016 IPR000994 Peptidase M24, structural domain UPTC3659_RS00525 079a75625c69800ce11920c76574d370 251 PANTHER PTHR10804 1 251 5.0E-78 T 23-04-2016 UPTC3659_RS02230 917b8d5c635a9964744479d827a9065a 124 Pfam PF01230 HIT domain 2 83 2.0E-4 T 23-04-2016 IPR001310 Histidine triad (HIT) protein UPTC3659_RS02230 917b8d5c635a9964744479d827a9065a 124 SUPERFAMILY SSF54197 2 108 3.78E-21 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 UPTC3659_RS02230 917b8d5c635a9964744479d827a9065a 124 Gene3D G3DSA:3.30.428.10 8 99 1.1E-18 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 UPTC3659_RS00440 face4bfe3637084b821b6ba28d0ffd68 75 Gene3D G3DSA:2.30.30.30 2 71 1.1E-19 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 UPTC3659_RS00440 face4bfe3637084b821b6ba28d0ffd68 75 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 75 14.917 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00440 face4bfe3637084b821b6ba28d0ffd68 75 Pfam PF00467 KOW motif 7 38 4.6E-9 T 23-04-2016 IPR005824 KOW UPTC3659_RS00440 face4bfe3637084b821b6ba28d0ffd68 75 SUPERFAMILY SSF50104 1 71 2.11E-25 T 23-04-2016 IPR008991 Translation protein SH3-like domain UPTC3659_RS00440 face4bfe3637084b821b6ba28d0ffd68 75 PANTHER PTHR12903 2 71 1.3E-24 T 23-04-2016 UPTC3659_RS00440 face4bfe3637084b821b6ba28d0ffd68 75 SMART SM00739 4 31 7.8E-7 T 23-04-2016 IPR005824 KOW UPTC3659_RS00440 face4bfe3637084b821b6ba28d0ffd68 75 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 23-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00440 face4bfe3637084b821b6ba28d0ffd68 75 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 71 1.5E-8 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00440 face4bfe3637084b821b6ba28d0ffd68 75 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 73 1.6E-28 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06100 340e3ed539229437707b1613224ea0d5 241 PANTHER PTHR13799 1 241 4.7E-46 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 UPTC3659_RS06100 340e3ed539229437707b1613224ea0d5 241 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 238 1.1E-50 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 UPTC3659_RS06100 340e3ed539229437707b1613224ea0d5 241 Gene3D G3DSA:3.40.1390.30 1 111 7.4E-31 T 23-04-2016 UPTC3659_RS06100 340e3ed539229437707b1613224ea0d5 241 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 225 1.5E-60 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 UPTC3659_RS06100 340e3ed539229437707b1613224ea0d5 241 SUPERFAMILY SSF102705 1 240 1.2E-68 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 UPTC3659_RS06100 340e3ed539229437707b1613224ea0d5 241 Gene3D G3DSA:3.40.1390.30 126 206 6.1E-21 T 23-04-2016 UPTC3659_RS06100 340e3ed539229437707b1613224ea0d5 241 PANTHER PTHR13799:SF13 1 241 4.7E-46 T 23-04-2016 UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 283 1.3E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 SMART SM00388 227 292 4.3E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 SMART SM00387 328 429 2.4E-17 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 SUPERFAMILY SSF55874 293 427 1.7E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 Gene3D G3DSA:3.30.565.10 294 426 2.1E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 PANTHER PTHR24423 192 425 7.5E-35 T 23-04-2016 UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 PANTHER PTHR24423 43 50 7.5E-35 T 23-04-2016 UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 Gene3D G3DSA:1.10.287.130 218 283 9.9E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 426 1.6E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04600 33153e588cee068746b8a35fad96b27a 429 SUPERFAMILY SSF47384 217 288 1.84E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 10 338 4.9E-155 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 Gene3D G3DSA:3.30.420.40 163 189 1.1E-30 T 23-04-2016 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 Gene3D G3DSA:3.30.420.40 266 320 1.1E-30 T 23-04-2016 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 SUPERFAMILY SSF53067 153 335 3.46E-45 T 23-04-2016 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 Pfam PF06723 MreB/Mbl protein 12 338 5.7E-143 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 Gene3D G3DSA:3.90.640.10 190 261 6.3E-28 T 23-04-2016 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 PANTHER PTHR19375:SF117 10 329 6.4E-154 T 23-04-2016 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 SUPERFAMILY SSF53067 10 150 1.46E-38 T 23-04-2016 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 190 210 5.3E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 5.3E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 5.3E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 303 329 5.3E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 135 154 5.3E-63 T 23-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 PANTHER PTHR19375 10 329 6.4E-154 T 23-04-2016 UPTC3659_RS08075 d8b6b75b0ef47a4c983923b92ac9f941 345 Gene3D G3DSA:3.30.420.40 11 162 3.6E-46 T 23-04-2016 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 SUPERFAMILY SSF51278 107 222 7.59E-46 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 106 206 2.5E-43 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 Hamap MF_01955 Urease subunit alpha [ureA]. 1 223 44.797 T 23-04-2016 IPR008223 Urease, gamma-beta subunit GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 PANTHER PTHR33569 2 223 1.1E-90 T 23-04-2016 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 PIRSF PIRSF001225 1 223 2.9E-102 T 23-04-2016 IPR008223 Urease, gamma-beta subunit GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 Gene3D G3DSA:2.10.150.10 107 222 2.0E-49 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 PANTHER PTHR33569:SF1 2 223 1.1E-90 T 23-04-2016 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 Pfam PF00699 Urease beta subunit 108 202 1.3E-41 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 Pfam PF00547 Urease, gamma subunit 1 99 3.6E-35 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 Hamap MF_01954 Urease subunit beta [ureB]. 105 205 28.159 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 5.9E-38 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 SUPERFAMILY SSF54111 1 103 2.35E-36 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 Gene3D G3DSA:3.30.280.10 1 99 2.3E-37 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00025 3deebc2d986930f77df79640f060ffd4 223 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 10 99 2.0E-46 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 Gene3D G3DSA:1.10.8.60 307 405 3.2E-37 T 23-04-2016 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 400 2.4E-183 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 SMART SM00382 107 269 1.3E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 SMART SM01086 308 401 3.7E-32 T 23-04-2016 IPR019489 Clp ATPase, C-terminal UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 1 405 48.79 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 PANTHER PTHR11262:SF4 4 402 9.0E-210 T 23-04-2016 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 SMART SM00994 2 43 5.6E-7 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 Pfam PF06689 ClpX C4-type zinc finger 3 40 4.6E-5 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 SUPERFAMILY SSF52540 61 395 8.5E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 300 2.4E-48 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 308 378 2.5E-15 T 23-04-2016 IPR019489 Clp ATPase, C-terminal UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 PANTHER PTHR11262 4 402 9.0E-210 T 23-04-2016 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 167 182 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 Gene3D G3DSA:3.40.50.300 60 249 1.0E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08080 62262632990612b98e1b98e88116b5e8 409 Gene3D G3DSA:3.40.50.300 285 300 1.0E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07500 bfc2531c95a83dd5f60af3b070b20714 572 Pfam PF03235 Protein of unknown function DUF262 9 214 2.1E-31 T 23-04-2016 IPR004919 Domain of unknown function DUF262 UPTC3659_RS07500 bfc2531c95a83dd5f60af3b070b20714 572 PANTHER PTHR35149 13 215 7.4E-21 T 23-04-2016 UPTC3659_RS07500 bfc2531c95a83dd5f60af3b070b20714 572 Pfam PF07510 Protein of unknown function (DUF1524) 423 557 2.1E-9 T 23-04-2016 IPR011089 Domain of unknown function DUF1524 UPTC3659_RS07500 bfc2531c95a83dd5f60af3b070b20714 572 PANTHER PTHR35149:SF2 13 215 7.4E-21 T 23-04-2016 UPTC3659_RS08635 7d146977961ab4de141091fc05309eb5 246 Gene3D G3DSA:3.10.200.10 32 241 4.5E-44 T 23-04-2016 IPR001148 Alpha carbonic anhydrase UPTC3659_RS08635 7d146977961ab4de141091fc05309eb5 246 Pfam PF00194 Eukaryotic-type carbonic anhydrase 33 234 1.2E-25 T 23-04-2016 IPR001148 Alpha carbonic anhydrase UPTC3659_RS08635 7d146977961ab4de141091fc05309eb5 246 PANTHER PTHR18952 32 231 1.7E-30 T 23-04-2016 IPR023561 Carbonic anhydrase, alpha-class UPTC3659_RS08635 7d146977961ab4de141091fc05309eb5 246 SUPERFAMILY SSF51069 28 241 1.26E-46 T 23-04-2016 IPR001148 Alpha carbonic anhydrase UPTC3659_RS08635 7d146977961ab4de141091fc05309eb5 246 SMART SM01057 26 245 8.7E-27 T 23-04-2016 IPR001148 Alpha carbonic anhydrase UPTC3659_RS05955 78e04fe670c9c07e1744cbd35e869f6d 150 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 70 147 1.9E-32 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 UPTC3659_RS05955 78e04fe670c9c07e1744cbd35e869f6d 150 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 70 149 8.7E-29 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 UPTC3659_RS05955 78e04fe670c9c07e1744cbd35e869f6d 150 SUPERFAMILY SSF53155 3 74 1.41E-8 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 UPTC3659_RS05955 78e04fe670c9c07e1744cbd35e869f6d 150 Gene3D G3DSA:1.10.10.10 68 149 1.4E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS05955 78e04fe670c9c07e1744cbd35e869f6d 150 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 1 150 34.725 T 23-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 UPTC3659_RS05955 78e04fe670c9c07e1744cbd35e869f6d 150 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 119 125 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 UPTC3659_RS05955 78e04fe670c9c07e1744cbd35e869f6d 150 PANTHER PTHR10815:SF5 42 149 1.9E-43 T 23-04-2016 UPTC3659_RS05955 78e04fe670c9c07e1744cbd35e869f6d 150 PANTHER PTHR10815 42 149 1.9E-43 T 23-04-2016 UPTC3659_RS05955 78e04fe670c9c07e1744cbd35e869f6d 150 SUPERFAMILY SSF46767 68 149 4.05E-28 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 SUPERFAMILY SSF49493 211 264 1.7E-14 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 SUPERFAMILY SSF49493 116 167 1.7E-14 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 Pfam PF01556 DnaJ C terminal domain 120 331 3.0E-32 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 Pfam PF00226 DnaJ domain 4 66 4.8E-28 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 370 33.532 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 PANTHER PTHR24078 4 359 2.1E-118 T 23-04-2016 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 Pfam PF00684 DnaJ central domain 146 205 1.7E-13 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 Gene3D G3DSA:1.10.287.110 4 100 7.2E-34 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 Gene3D G3DSA:2.60.260.20 118 140 3.0E-12 T 23-04-2016 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 Gene3D G3DSA:2.60.260.20 208 249 3.0E-12 T 23-04-2016 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 Gene3D G3DSA:2.60.260.20 255 332 7.1E-14 T 23-04-2016 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 PANTHER PTHR24078:SF190 4 359 2.1E-118 T 23-04-2016 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 Gene3D G3DSA:2.10.230.10 141 207 2.4E-19 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 4 347 1.6E-117 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 SMART SM00271 3 61 7.8E-31 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 SUPERFAMILY SSF57938 133 207 4.32E-18 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 SUPERFAMILY SSF49493 257 342 7.46E-17 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 PRINTS PR00625 DnaJ domain signature 24 39 1.4E-27 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 PRINTS PR00625 DnaJ domain signature 6 24 1.4E-27 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 PRINTS PR00625 DnaJ domain signature 41 61 1.4E-27 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 PRINTS PR00625 DnaJ domain signature 61 80 1.4E-27 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 23-04-2016 IPR018253 DnaJ domain, conserved site UPTC3659_RS02620 970da8bbae9196f0ee09f54152b23b9c 373 SUPERFAMILY SSF46565 3 104 5.76E-33 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 PIRSF PIRSF004762 1 354 6.3E-103 T 23-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 SUPERFAMILY SSF102114 19 308 8.11E-45 T 23-04-2016 UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 Gene3D G3DSA:3.20.20.70 12 340 4.0E-56 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 4 351 5.4E-145 T 23-04-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 SMART SM00729 50 276 0.0072 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 Pfam PF04055 Radical SAM superfamily 54 219 1.5E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 PANTHER PTHR22976:SF4 1 354 1.0E-124 T 23-04-2016 UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 46 351 3.0E-117 T 23-04-2016 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 1 354 49.792 T 23-04-2016 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 UPTC3659_RS02250 2b6cdb2877e4fd53d8d40e643c6f10d0 354 PANTHER PTHR22976 1 354 1.0E-124 T 23-04-2016 UPTC3659_RS05915 a96b59fa5fd5722f66c55034b144ba65 403 SUPERFAMILY SSF53686 4 316 1.27E-100 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS05915 a96b59fa5fd5722f66c55034b144ba65 403 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 304 1.3E-81 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS05915 a96b59fa5fd5722f66c55034b144ba65 403 PANTHER PTHR10314:SF17 1 356 1.7E-150 T 23-04-2016 UPTC3659_RS05915 a96b59fa5fd5722f66c55034b144ba65 403 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 UPTC3659_RS05915 a96b59fa5fd5722f66c55034b144ba65 403 SUPERFAMILY SSF55021 327 390 2.26E-5 T 23-04-2016 UPTC3659_RS05915 a96b59fa5fd5722f66c55034b144ba65 403 Gene3D G3DSA:3.40.50.1100 70 320 4.1E-79 T 23-04-2016 UPTC3659_RS05915 a96b59fa5fd5722f66c55034b144ba65 403 Gene3D G3DSA:3.30.70.260 329 390 5.5E-5 T 23-04-2016 UPTC3659_RS05915 a96b59fa5fd5722f66c55034b144ba65 403 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 400 8.7E-172 T 23-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 UPTC3659_RS05915 a96b59fa5fd5722f66c55034b144ba65 403 PANTHER PTHR10314 1 356 1.7E-150 T 23-04-2016 UPTC3659_RS07265 732b735751698143278952ad6e69f31d 270 PIRSF PIRSF035875 2 270 4.2E-45 T 23-04-2016 IPR017039 Virulence factor BrkB UPTC3659_RS07265 732b735751698143278952ad6e69f31d 270 PANTHER PTHR30213:SF0 15 248 5.5E-35 T 23-04-2016 UPTC3659_RS07265 732b735751698143278952ad6e69f31d 270 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 14 254 9.1E-42 T 23-04-2016 IPR017039 Virulence factor BrkB UPTC3659_RS07265 732b735751698143278952ad6e69f31d 270 Pfam PF03631 Virulence factor BrkB 16 249 6.0E-42 T 23-04-2016 IPR017039 Virulence factor BrkB UPTC3659_RS07265 732b735751698143278952ad6e69f31d 270 PANTHER PTHR30213 15 248 5.5E-35 T 23-04-2016 UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 SUPERFAMILY SSF52540 270 540 1.34E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 SMART SM00487 219 404 4.9E-29 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 Gene3D G3DSA:3.40.50.300 213 398 6.1E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 SMART SM00490 447 526 3.3E-10 T 23-04-2016 IPR001650 Helicase, C-terminal UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 SUPERFAMILY SSF50249 6 144 9.42E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 PANTHER PTHR24031 253 539 6.6E-49 T 23-04-2016 UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 PANTHER PTHR24031 122 187 6.6E-49 T 23-04-2016 UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 PANTHER PTHR24031 223 236 6.6E-49 T 23-04-2016 UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 Pfam PF00270 DEAD/DEAH box helicase 227 379 9.7E-15 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 PANTHER PTHR24031:SF249 253 539 6.6E-49 T 23-04-2016 UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 PANTHER PTHR24031:SF249 122 187 6.6E-49 T 23-04-2016 UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 PANTHER PTHR24031:SF249 223 236 6.6E-49 T 23-04-2016 UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 Gene3D G3DSA:3.40.50.300 399 569 4.2E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03965 0844d82e52a71d05a45c548e8e3b6034 607 Pfam PF00271 Helicase conserved C-terminal domain 415 526 2.0E-14 T 23-04-2016 IPR001650 Helicase, C-terminal UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.3E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.3E-12 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PANTHER PTHR24322:SF328 155 187 2.0E-45 T 23-04-2016 UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PANTHER PTHR24322:SF328 10 139 2.0E-45 T 23-04-2016 UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 Gene3D G3DSA:3.40.50.720 2 246 4.7E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 6.0E-62 T 23-04-2016 UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PANTHER PTHR24322 155 187 2.0E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PANTHER PTHR24322 10 139 2.0E-45 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 SUPERFAMILY SSF51735 5 247 1.51E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 8.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 8.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.2E-41 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 4.6E-4 T 23-04-2016 UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UPTC3659_RS01440 ebde23e215fd5656b267c784a2482429 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 2.1E-96 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 PANTHER PTHR33284 1 178 1.5E-28 T 23-04-2016 UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 Gene3D G3DSA:2.40.240.10 2 87 1.4E-18 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 2 86 1.0E-28 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 178 21.264 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 177 5.4E-21 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 2 174 4.2E-49 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 SUPERFAMILY SSF50715 6 175 2.79E-44 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 Pfam PF01386 Ribosomal L25p family 2 87 5.9E-17 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 PANTHER PTHR33284:SF1 1 178 1.5E-28 T 23-04-2016 UPTC3659_RS07890 bf88f3db6510cbc68de27d3bc22459ba 178 Gene3D G3DSA:2.170.120.20 97 177 1.9E-23 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain UPTC3659_RS05740 9d0d8e468a2803925114a3f817d81423 255 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 255 81.532 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 UPTC3659_RS05740 9d0d8e468a2803925114a3f817d81423 255 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 255 3.0E-81 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 UPTC3659_RS05740 9d0d8e468a2803925114a3f817d81423 255 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 253 6.4E-81 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 UPTC3659_RS05740 9d0d8e468a2803925114a3f817d81423 255 Gene3D G3DSA:3.20.20.70 1 254 1.6E-85 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS05740 9d0d8e468a2803925114a3f817d81423 255 PANTHER PTHR30456:SF0 184 255 4.4E-84 T 23-04-2016 UPTC3659_RS05740 9d0d8e468a2803925114a3f817d81423 255 PANTHER PTHR30456:SF0 1 158 4.4E-84 T 23-04-2016 UPTC3659_RS05740 9d0d8e468a2803925114a3f817d81423 255 SUPERFAMILY SSF63892 2 254 2.62E-73 T 23-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 UPTC3659_RS05740 9d0d8e468a2803925114a3f817d81423 255 PANTHER PTHR30456 184 255 4.4E-84 T 23-04-2016 UPTC3659_RS05740 9d0d8e468a2803925114a3f817d81423 255 PANTHER PTHR30456 1 158 4.4E-84 T 23-04-2016 UPTC3659_RS03660 673223166a2ed8a4380db20efcfb8976 71 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 8 65 7.0E-9 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM UPTC3659_RS03660 673223166a2ed8a4380db20efcfb8976 71 Gene3D G3DSA:3.40.1620.10 17 57 2.5E-6 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM UPTC3659_RS03660 673223166a2ed8a4380db20efcfb8976 71 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 10 58 4.1E-6 T 23-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM UPTC3659_RS03660 673223166a2ed8a4380db20efcfb8976 71 SUPERFAMILY SSF143120 8 63 1.7E-10 T 23-04-2016 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 1.9E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 1.9E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 PIRSF PIRSF006485 1 459 1.2E-145 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 Gene3D G3DSA:3.40.50.300 193 376 4.9E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 SUPERFAMILY SSF52540 188 452 3.39E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 Gene3D G3DSA:3.30.300.20 377 453 3.0E-30 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 449 5.4E-144 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 Hamap MF_00195 GTPase Der [der]. 1 454 32.229 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 Gene3D G3DSA:3.40.50.300 4 152 9.1E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 PANTHER PTHR11649 4 446 2.1E-63 T 23-04-2016 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 371 450 6.9E-28 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 SUPERFAMILY SSF52540 4 166 3.51E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 195 359 1.1E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 152 6.7E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 Pfam PF01926 50S ribosome-binding GTPase 4 117 9.9E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS02855 65c67c19dd13189fb63d72731b512671 461 Pfam PF01926 50S ribosome-binding GTPase 198 315 1.8E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS00555 fdcbb0da00bfd92e7f0e9b8da2115a43 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00555 fdcbb0da00bfd92e7f0e9b8da2115a43 121 SUPERFAMILY SSF46946 2 120 1.28E-44 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 UPTC3659_RS00555 fdcbb0da00bfd92e7f0e9b8da2115a43 121 Gene3D G3DSA:1.10.8.50 1 71 4.0E-31 T 23-04-2016 UPTC3659_RS00555 fdcbb0da00bfd92e7f0e9b8da2115a43 121 Pfam PF00416 Ribosomal protein S13/S18 3 109 9.3E-32 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00555 fdcbb0da00bfd92e7f0e9b8da2115a43 121 PANTHER PTHR10871 1 120 2.0E-62 T 23-04-2016 UPTC3659_RS00555 fdcbb0da00bfd92e7f0e9b8da2115a43 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.4E-53 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00555 fdcbb0da00bfd92e7f0e9b8da2115a43 121 PIRSF PIRSF002134 1 121 2.5E-42 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00555 fdcbb0da00bfd92e7f0e9b8da2115a43 121 Gene3D G3DSA:4.10.910.10 73 120 1.1E-24 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal UPTC3659_RS00555 fdcbb0da00bfd92e7f0e9b8da2115a43 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 27.859 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06195 be114c8b5ddaa0a5389ec38e1d8a41f5 270 PANTHER PTHR30435:SF16 1 265 1.5E-44 T 23-04-2016 UPTC3659_RS06195 be114c8b5ddaa0a5389ec38e1d8a41f5 270 SUPERFAMILY SSF117143 96 224 1.57E-17 T 23-04-2016 UPTC3659_RS06195 be114c8b5ddaa0a5389ec38e1d8a41f5 270 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 192 264 8.5E-14 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UPTC3659_RS06195 be114c8b5ddaa0a5389ec38e1d8a41f5 270 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 141 4.0E-28 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G UPTC3659_RS06195 be114c8b5ddaa0a5389ec38e1d8a41f5 270 PANTHER PTHR30435 1 265 1.5E-44 T 23-04-2016 UPTC3659_RS06195 be114c8b5ddaa0a5389ec38e1d8a41f5 270 Pfam PF00460 Flagella basal body rod protein 6 35 3.7E-9 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UPTC3659_RS06195 be114c8b5ddaa0a5389ec38e1d8a41f5 270 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 256 26.776 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 PANTHER PTHR21089 1 258 4.0E-62 T 23-04-2016 UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 SUPERFAMILY SSF53223 2 96 1.09E-23 T 23-04-2016 UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 SUPERFAMILY SSF51735 97 250 1.71E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 112 175 7.3E-7 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 Gene3D G3DSA:3.40.192.10 1 101 8.6E-31 T 23-04-2016 UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 PANTHER PTHR21089:SF1 1 258 4.0E-62 T 23-04-2016 UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 Gene3D G3DSA:3.40.50.720 102 255 1.1E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 2 257 2.5E-64 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS02615 e6e66383491b4f7868394d6e11cb6825 260 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 84 9.9E-17 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08095 4cb251334bbbf53dafe9cf58ef6c8683 357 SUPERFAMILY SSF52402 13 112 1.41E-5 T 23-04-2016 UPTC3659_RS08095 4cb251334bbbf53dafe9cf58ef6c8683 357 Gene3D G3DSA:3.40.50.620 9 112 5.2E-5 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS08095 4cb251334bbbf53dafe9cf58ef6c8683 357 PANTHER PTHR36701 1 220 2.3E-60 T 23-04-2016 UPTC3659_RS08095 4cb251334bbbf53dafe9cf58ef6c8683 357 Pfam PF02677 Uncharacterized BCR, COG1636 1 175 2.0E-55 T 23-04-2016 IPR003828 Protein of unknown function DUF208 UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 SUPERFAMILY SSF48179 143 242 1.46E-21 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 Gene3D G3DSA:1.10.3730.10 143 242 2.3E-25 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 202 224 - T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 SUPERFAMILY SSF51735 4 138 8.4E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 84 3.3E-7 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 242 17.765 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 Gene3D G3DSA:3.40.50.720 4 138 3.0E-16 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 PANTHER PTHR11645 6 242 4.1E-39 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 PANTHER PTHR11645:SF0 6 242 4.1E-39 T 23-04-2016 UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 PIRSF PIRSF000193 1 242 1.0E-57 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 242 3.8E-60 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 UPTC3659_RS05885 2fc1b818d349e6a83609217179302ea1 242 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 144 241 4.1E-25 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 UPTC3659_RS01720 0e83a3df0687a5cd8b1ecb3b1ac46e37 207 Pfam PF04028 Domain of unknown function (DUF374) 61 125 3.1E-24 T 23-04-2016 IPR007172 Domain of unknown function DUF374 UPTC3659_RS01720 0e83a3df0687a5cd8b1ecb3b1ac46e37 207 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 33 127 2.0E-49 T 23-04-2016 IPR007172 Domain of unknown function DUF374 UPTC3659_RS07770 e0057c43941884b3ec4b9cc877a7bcba 244 PANTHER PTHR30329 3 237 8.5E-23 T 23-04-2016 UPTC3659_RS07770 e0057c43941884b3ec4b9cc877a7bcba 244 SUPERFAMILY SSF103088 110 223 4.32E-22 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS07770 e0057c43941884b3ec4b9cc877a7bcba 244 Pfam PF00691 OmpA family 123 215 6.9E-18 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS07770 e0057c43941884b3ec4b9cc877a7bcba 244 PANTHER PTHR30329:SF4 3 237 8.5E-23 T 23-04-2016 UPTC3659_RS07770 e0057c43941884b3ec4b9cc877a7bcba 244 Gene3D G3DSA:3.30.1330.60 103 223 6.7E-23 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS07770 e0057c43941884b3ec4b9cc877a7bcba 244 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 54 2.0E-14 T 23-04-2016 IPR025713 Motility protein B, N-terminal domain UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 Pfam PF00005 ABC transporter 338 474 1.4E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 SUPERFAMILY SSF52540 321 528 1.49E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 ProSitePatterns PS00211 ABC transporters family signature. 447 461 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 15 524 2.8E-99 T 23-04-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 SMART SM00382 347 523 1.8E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 SUPERFAMILY SSF90123 4 302 9.81E-21 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 PANTHER PTHR24220:SF425 324 526 6.0E-77 T 23-04-2016 UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 PANTHER PTHR24220 324 526 6.0E-77 T 23-04-2016 UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 Gene3D G3DSA:1.20.1560.10 4 301 3.4E-17 T 23-04-2016 UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 Gene3D G3DSA:3.40.50.300 322 537 1.5E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08705 3448aab27666852e33b7fa04fbf19096 542 Pfam PF00664 ABC transporter transmembrane region 15 261 7.9E-15 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 PANTHER PTHR19384 1 115 4.0E-34 T 23-04-2016 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 PANTHER PTHR19384 135 159 4.0E-34 T 23-04-2016 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 PRINTS PR00369 Flavodoxin signature 48 59 4.6E-6 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 PRINTS PR00369 Flavodoxin signature 4 17 4.6E-6 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 PRINTS PR00369 Flavodoxin signature 75 85 4.6E-6 T 23-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 23-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 TIGRFAM TIGR01752 flav_long: flavodoxin 3 162 3.4E-64 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 PIRSF PIRSF038996 1 163 6.9E-56 T 23-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 PANTHER PTHR19384:SF73 1 115 4.0E-34 T 23-04-2016 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 PANTHER PTHR19384:SF73 135 159 4.0E-34 T 23-04-2016 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 Pfam PF00258 Flavodoxin 5 154 1.2E-27 T 23-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 Gene3D G3DSA:3.40.50.360 1 162 2.1E-54 T 23-04-2016 IPR029039 Flavoprotein-like domain UPTC3659_RS02135 392cf564a8d41c91d4e68d77b065b01f 163 SUPERFAMILY SSF52218 3 162 3.22E-44 T 23-04-2016 IPR029039 Flavoprotein-like domain UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 43 90 1.4E-16 T 23-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 SUPERFAMILY SSF46626 62 196 1.43E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 Gene3D G3DSA:1.10.760.10 202 290 1.4E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 PANTHER PTHR33751:SF1 31 292 2.0E-32 T 23-04-2016 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 PANTHER PTHR33751 31 292 2.0E-32 T 23-04-2016 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 120 194 1.9E-6 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 210 285 3.2E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 39 291 2.0E-55 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 Gene3D G3DSA:1.10.760.10 66 196 5.0E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 PIRSF PIRSF000006 13 292 1.9E-68 T 23-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 UPTC3659_RS01975 1b6441d4bbb2428ab6bd034b095bd084 292 SUPERFAMILY SSF46626 205 290 2.91E-14 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS08105 2514c248ec30162ebaf21ac7270675dd 68 Gene3D G3DSA:3.30.429.20 2 63 1.1E-17 T 23-04-2016 UPTC3659_RS08105 2514c248ec30162ebaf21ac7270675dd 68 SUPERFAMILY SSF55331 2 64 9.3E-16 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily UPTC3659_RS08105 2514c248ec30162ebaf21ac7270675dd 68 Pfam PF01361 Tautomerase enzyme 2 61 4.3E-17 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 Gene3D G3DSA:3.30.110.10 81 173 1.9E-28 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 PANTHER PTHR10938 3 173 1.2E-54 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 78 1.1E-30 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 SUPERFAMILY SSF55200 84 173 2.49E-26 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 172 2.4E-64 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 Gene3D G3DSA:3.10.20.80 4 80 3.8E-34 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 170 8.2E-29 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 172 28.287 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 UPTC3659_RS00170 7992183fa68a18fda4d302208b0354a9 173 SUPERFAMILY SSF54364 7 80 1.31E-28 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 UPTC3659_RS03065 c6213916f6aeac65ad63e4645e12c240 96 TIGRFAM TIGR00789 flhB_rel: FlhB domain protein 4 85 1.6E-35 T 23-04-2016 IPR004683 Type III secretion system substrate exporter FlhB-like UPTC3659_RS03065 c6213916f6aeac65ad63e4645e12c240 96 Gene3D G3DSA:3.40.1690.10 5 84 4.0E-26 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal UPTC3659_RS03065 c6213916f6aeac65ad63e4645e12c240 96 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 79 9.9E-19 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UPTC3659_RS03065 c6213916f6aeac65ad63e4645e12c240 96 PANTHER PTHR30531 5 94 1.1E-32 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UPTC3659_RS03065 c6213916f6aeac65ad63e4645e12c240 96 SUPERFAMILY SSF160544 4 83 1.83E-23 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal UPTC3659_RS03835 3066aefc9a0c638a819983cf4c62aa9c 349 Gene3D G3DSA:3.80.30.20 3 228 5.3E-27 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe UPTC3659_RS03835 3066aefc9a0c638a819983cf4c62aa9c 349 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 1 345 2.7E-92 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- UPTC3659_RS03835 3066aefc9a0c638a819983cf4c62aa9c 349 PANTHER PTHR13932 1 305 1.2E-88 T 23-04-2016 UPTC3659_RS03835 3066aefc9a0c638a819983cf4c62aa9c 349 SMART SM00729 1 216 1.5E-33 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS03835 3066aefc9a0c638a819983cf4c62aa9c 349 Pfam PF04055 Radical SAM superfamily 5 153 2.2E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS03835 3066aefc9a0c638a819983cf4c62aa9c 349 SUPERFAMILY SSF102114 2 333 6.54E-78 T 23-04-2016 UPTC3659_RS00675 df5da90b01fab81548ce90bca6d6ac4b 197 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 52 181 5.9E-5 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component UPTC3659_RS00675 df5da90b01fab81548ce90bca6d6ac4b 197 Gene3D G3DSA:3.40.50.10610 26 196 3.1E-20 T 23-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component UPTC3659_RS00675 df5da90b01fab81548ce90bca6d6ac4b 197 SUPERFAMILY SSF159594 30 195 1.7E-23 T 23-04-2016 UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 PANTHER PTHR18866 1 479 1.2E-271 T 23-04-2016 UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 7.9E-74 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 1.2E-44 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 Gene3D G3DSA:3.30.1490.20 129 202 1.2E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 Gene3D G3DSA:3.30.470.20 205 449 1.0E-95 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 7.6E-192 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 SUPERFAMILY SSF56059 82 348 2.12E-64 T 23-04-2016 UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 SMART SM00878 336 442 5.9E-51 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 7.3E-36 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 SUPERFAMILY SSF52440 1 112 1.01E-45 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 Gene3D G3DSA:3.40.50.20 1 128 1.2E-49 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS03130 b61c27bdf84b30758cc2614f0c54290b 480 SUPERFAMILY SSF51246 330 448 7.85E-38 T 23-04-2016 IPR011054 Rudiment single hybrid motif UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 Gene3D G3DSA:3.40.50.150 72 242 3.1E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 SMART SM00138 6 256 6.8E-56 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 PANTHER PTHR24422:SF9 1 249 4.5E-29 T 23-04-2016 UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 SUPERFAMILY SSF53335 72 241 1.74E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 Gene3D G3DSA:1.10.155.10 2 68 1.5E-4 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 SUPERFAMILY SSF47757 2 70 2.35E-5 T 23-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 Pfam PF01739 CheR methyltransferase, SAM binding domain 72 245 8.2E-42 T 23-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 1.7E-23 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 PRINTS PR00996 Glutamate methyltransferase family signature 197 211 1.7E-23 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 1.7E-23 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 PRINTS PR00996 Glutamate methyltransferase family signature 128 144 1.7E-23 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 PRINTS PR00996 Glutamate methyltransferase family signature 97 117 1.7E-23 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 PRINTS PR00996 Glutamate methyltransferase family signature 216 239 1.7E-23 T 23-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UPTC3659_RS03945 58df648c3e33f8a77487533b313f159f 260 PANTHER PTHR24422 1 249 4.5E-29 T 23-04-2016 UPTC3659_RS08160 e7855c0fdc3d5b61543655e566a7b4ff 400 PANTHER PTHR11751:SF302 15 400 3.6E-200 T 23-04-2016 UPTC3659_RS08160 e7855c0fdc3d5b61543655e566a7b4ff 400 Gene3D G3DSA:3.40.640.10 47 267 3.2E-59 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS08160 e7855c0fdc3d5b61543655e566a7b4ff 400 SUPERFAMILY SSF53383 6 399 7.17E-101 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS08160 e7855c0fdc3d5b61543655e566a7b4ff 400 Pfam PF00155 Aminotransferase class I and II 34 392 7.3E-60 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UPTC3659_RS08160 e7855c0fdc3d5b61543655e566a7b4ff 400 Gene3D G3DSA:3.90.1150.10 268 399 6.5E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS08160 e7855c0fdc3d5b61543655e566a7b4ff 400 PANTHER PTHR11751 15 400 3.6E-200 T 23-04-2016 UPTC3659_RS03020 8243013f63f5cbe9fb6423264e537c4d 291 Pfam PF08003 Protein of unknown function (DUF1698) 33 287 1.1E-76 T 23-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like UPTC3659_RS03020 8243013f63f5cbe9fb6423264e537c4d 291 Gene3D G3DSA:3.40.50.150 81 257 3.2E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03020 8243013f63f5cbe9fb6423264e537c4d 291 PANTHER PTHR10108:SF847 55 291 1.0E-41 T 23-04-2016 UPTC3659_RS03020 8243013f63f5cbe9fb6423264e537c4d 291 SUPERFAMILY SSF53335 57 246 8.6E-25 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03020 8243013f63f5cbe9fb6423264e537c4d 291 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 2 291 42.75 T 23-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 UPTC3659_RS03020 8243013f63f5cbe9fb6423264e537c4d 291 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 20 287 1.6E-87 T 23-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 UPTC3659_RS03020 8243013f63f5cbe9fb6423264e537c4d 291 PANTHER PTHR10108 55 291 1.0E-41 T 23-04-2016 UPTC3659_RS07020 691634a53cb62242663fc53bda67814a 492 Pfam PF13145 PPIC-type PPIASE domain 241 358 1.9E-20 T 23-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 UPTC3659_RS07020 691634a53cb62242663fc53bda67814a 492 PANTHER PTHR10657:SF11 234 388 2.0E-23 T 23-04-2016 UPTC3659_RS07020 691634a53cb62242663fc53bda67814a 492 PANTHER PTHR10657:SF11 1 168 2.0E-23 T 23-04-2016 UPTC3659_RS07020 691634a53cb62242663fc53bda67814a 492 SUPERFAMILY SSF109998 199 235 1.73E-20 T 23-04-2016 IPR027304 Trigger factor/SurA domain UPTC3659_RS07020 691634a53cb62242663fc53bda67814a 492 SUPERFAMILY SSF109998 41 169 1.73E-20 T 23-04-2016 IPR027304 Trigger factor/SurA domain UPTC3659_RS07020 691634a53cb62242663fc53bda67814a 492 Pfam PF13624 SurA N-terminal domain 1 165 2.6E-44 T 23-04-2016 UPTC3659_RS07020 691634a53cb62242663fc53bda67814a 492 Gene3D G3DSA:3.10.50.40 319 368 1.6E-4 T 23-04-2016 UPTC3659_RS07020 691634a53cb62242663fc53bda67814a 492 PANTHER PTHR10657 234 388 2.0E-23 T 23-04-2016 UPTC3659_RS07020 691634a53cb62242663fc53bda67814a 492 PANTHER PTHR10657 1 168 2.0E-23 T 23-04-2016 UPTC3659_RS05810 e022b4e8d4bf98c014d856e20e9f0696 90 Gene3D G3DSA:1.10.287.10 3 89 3.9E-37 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 UPTC3659_RS05810 e022b4e8d4bf98c014d856e20e9f0696 90 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 88 2.4E-36 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS05810 e022b4e8d4bf98c014d856e20e9f0696 90 Pfam PF00312 Ribosomal protein S15 8 88 7.3E-35 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05810 e022b4e8d4bf98c014d856e20e9f0696 90 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 2.0E-38 T 23-04-2016 UPTC3659_RS05810 e022b4e8d4bf98c014d856e20e9f0696 90 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.065 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS05810 e022b4e8d4bf98c014d856e20e9f0696 90 SMART SM01387 8 88 2.5E-49 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05810 e022b4e8d4bf98c014d856e20e9f0696 90 SUPERFAMILY SSF47060 3 89 1.27E-33 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 UPTC3659_RS05810 e022b4e8d4bf98c014d856e20e9f0696 90 PANTHER PTHR23321 1 89 1.9E-40 T 23-04-2016 UPTC3659_RS05810 e022b4e8d4bf98c014d856e20e9f0696 90 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 Pfam PF01713 Smr domain 658 732 1.6E-18 T 23-04-2016 IPR002625 Smr domain UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 SMART SM00534 301 485 7.0E-30 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 PANTHER PTHR11361:SF14 274 571 8.4E-34 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 SMART SM00463 655 732 9.5E-11 T 23-04-2016 IPR002625 Smr domain UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 SUPERFAMILY SSF160443 656 732 7.19E-11 T 23-04-2016 IPR002625 Smr domain UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 SMART SM00533 6 292 2.1E-4 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 PANTHER PTHR11361 274 571 8.4E-34 T 23-04-2016 UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 732 18.194 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 Pfam PF00488 MutS domain V 304 483 4.9E-14 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 Gene3D G3DSA:3.40.50.300 279 488 2.0E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06880 ab9a5b3b163e1296d31ed59e8ee706e4 732 SUPERFAMILY SSF52540 277 488 5.33E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 SMART SM00244 55 239 9.0E-25 T 23-04-2016 IPR001107 Band 7 domain UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 PANTHER PTHR10264 129 292 1.9E-35 T 23-04-2016 IPR001972 Stomatin family GO:0016020 UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 PANTHER PTHR10264 39 109 1.9E-35 T 23-04-2016 IPR001972 Stomatin family GO:0016020 UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 PRINTS PR00679 Prohibitin signature 183 199 1.2E-16 T 23-04-2016 IPR000163 Prohibitin GO:0016020 UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 PRINTS PR00679 Prohibitin signature 257 273 1.2E-16 T 23-04-2016 IPR000163 Prohibitin GO:0016020 UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 PRINTS PR00679 Prohibitin signature 137 156 1.2E-16 T 23-04-2016 IPR000163 Prohibitin GO:0016020 UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 PRINTS PR00679 Prohibitin signature 160 178 1.2E-16 T 23-04-2016 IPR000163 Prohibitin GO:0016020 UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 PRINTS PR00679 Prohibitin signature 234 257 1.2E-16 T 23-04-2016 IPR000163 Prohibitin GO:0016020 UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 Pfam PF01145 SPFH domain / Band 7 family 59 259 4.4E-31 T 23-04-2016 IPR001107 Band 7 domain UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 SUPERFAMILY SSF117892 87 246 2.88E-11 T 23-04-2016 IPR001107 Band 7 domain UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 PANTHER PTHR10264:SF78 129 292 1.9E-35 T 23-04-2016 UPTC3659_RS08115 bea39266e9d38f892203c1d74289040b 356 PANTHER PTHR10264:SF78 39 109 1.9E-35 T 23-04-2016 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 Pfam PF00231 ATP synthase 3 292 3.8E-80 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 PANTHER PTHR11693 1 294 1.1E-88 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 293 31.258 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 Gene3D G3DSA:3.40.1380.10 71 198 1.8E-33 T 23-04-2016 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 292 6.2E-91 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 SUPERFAMILY SSF52943 3 292 3.66E-79 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 PRINTS PR00126 ATP synthase gamma subunit signature 271 292 1.5E-31 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 PRINTS PR00126 ATP synthase gamma subunit signature 172 189 1.5E-31 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 PRINTS PR00126 ATP synthase gamma subunit signature 240 259 1.5E-31 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 PRINTS PR00126 ATP synthase gamma subunit signature 79 98 1.5E-31 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 Gene3D G3DSA:1.10.287.80 242 288 9.2E-25 T 23-04-2016 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 Gene3D G3DSA:1.10.287.80 208 241 7.2E-25 T 23-04-2016 UPTC3659_RS01050 9f19688c0d4780b4da9d97c3c1c4c0e0 294 Gene3D G3DSA:1.10.287.80 19 60 7.2E-25 T 23-04-2016 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 Gene3D G3DSA:2.30.330.10 244 329 1.3E-10 T 23-04-2016 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 SUPERFAMILY SSF103039 48 232 3.14E-28 T 23-04-2016 IPR028976 CheC-like domain UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 325 1.6E-102 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 PANTHER PTHR30034 1 345 6.4E-91 T 23-04-2016 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 SUPERFAMILY SSF101801 252 330 1.16E-13 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 Pfam PF02154 Flagellar motor switch protein FliM 42 232 2.2E-74 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 PIRSF PIRSF002888 1 335 3.5E-110 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 PRINTS PR00955 Flagellar motor switch protein FliM signature 214 232 4.7E-28 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 PRINTS PR00955 Flagellar motor switch protein FliM signature 118 137 4.7E-28 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 4.7E-28 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 PRINTS PR00955 Flagellar motor switch protein FliM signature 93 109 4.7E-28 T 23-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 256 325 1.3E-13 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 Gene3D G3DSA:3.40.1550.10 49 232 8.3E-7 T 23-04-2016 IPR028976 CheC-like domain UPTC3659_RS01265 4ec558a077d6c5a179a67abc311118be 363 PANTHER PTHR30034:SF0 1 345 6.4E-91 T 23-04-2016 UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 SMART SM00490 456 546 3.2E-17 T 23-04-2016 IPR001650 Helicase, C-terminal UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 SUPERFAMILY SSF52540 2 415 5.87E-123 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Gene3D G3DSA:3.40.50.300 420 581 4.3E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Gene3D G3DSA:3.40.50.300 2 86 1.1E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Gene3D G3DSA:3.40.50.300 275 338 1.1E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Gene3D G3DSA:3.40.50.300 388 406 1.1E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 PANTHER PTHR24029 1 655 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Pfam PF04851 Type III restriction enzyme, res subunit 8 116 5.3E-11 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Pfam PF12344 Ultra-violet resistance protein B 552 593 6.9E-16 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 2 655 3.6E-290 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 SUPERFAMILY SSF52540 333 560 5.41E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Gene3D G3DSA:4.10.860.10 604 655 1.2E-15 T 23-04-2016 IPR001943 UVR domain GO:0005515 UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 SUPERFAMILY SSF46600 613 655 6.67E-12 T 23-04-2016 IPR001943 UVR domain GO:0005515 UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Pfam PF02151 UvrB/uvrC motif 623 655 6.9E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 657 39.813 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Gene3D G3DSA:3.30.2060.10 158 226 3.4E-11 T 23-04-2016 UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 SMART SM00487 6 426 4.8E-26 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain UPTC3659_RS07100 a1001680d0c58825ba129a0f37622725 657 Pfam PF00271 Helicase conserved C-terminal domain 432 545 1.6E-19 T 23-04-2016 IPR001650 Helicase, C-terminal UPTC3659_RS03620 bdb166847d4cccb75354871d6a44f8ea 417 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 23-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 UPTC3659_RS03620 bdb166847d4cccb75354871d6a44f8ea 417 SUPERFAMILY SSF63411 2 209 6.5E-58 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UPTC3659_RS03620 bdb166847d4cccb75354871d6a44f8ea 417 Pfam PF00675 Insulinase (Peptidase family M16) 28 131 1.3E-22 T 23-04-2016 IPR011765 Peptidase M16, N-terminal UPTC3659_RS03620 bdb166847d4cccb75354871d6a44f8ea 417 Gene3D G3DSA:3.30.830.10 234 406 1.9E-24 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 UPTC3659_RS03620 bdb166847d4cccb75354871d6a44f8ea 417 Gene3D G3DSA:3.30.830.10 4 219 2.3E-56 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 UPTC3659_RS03620 bdb166847d4cccb75354871d6a44f8ea 417 PANTHER PTHR11851 1 414 5.8E-94 T 23-04-2016 UPTC3659_RS03620 bdb166847d4cccb75354871d6a44f8ea 417 Pfam PF05193 Peptidase M16 inactive domain 169 346 1.5E-29 T 23-04-2016 IPR007863 Peptidase M16, C-terminal UPTC3659_RS03620 bdb166847d4cccb75354871d6a44f8ea 417 PANTHER PTHR11851:SF136 1 414 5.8E-94 T 23-04-2016 UPTC3659_RS03620 bdb166847d4cccb75354871d6a44f8ea 417 SUPERFAMILY SSF63411 225 410 1.53E-32 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UPTC3659_RS07170 0fcf77cffe5c4c35432c8a3b0c7b3cdc 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 9 30 2.6E-10 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07170 0fcf77cffe5c4c35432c8a3b0c7b3cdc 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 296 315 2.6E-10 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07170 0fcf77cffe5c4c35432c8a3b0c7b3cdc 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 248 268 2.6E-10 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07170 0fcf77cffe5c4c35432c8a3b0c7b3cdc 444 PANTHER PTHR11616:SF167 6 444 7.8E-109 T 23-04-2016 UPTC3659_RS07170 0fcf77cffe5c4c35432c8a3b0c7b3cdc 444 Pfam PF00209 Sodium:neurotransmitter symporter family 6 119 1.8E-19 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07170 0fcf77cffe5c4c35432c8a3b0c7b3cdc 444 Pfam PF00209 Sodium:neurotransmitter symporter family 143 443 6.1E-22 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07170 0fcf77cffe5c4c35432c8a3b0c7b3cdc 444 SUPERFAMILY SSF161070 6 443 1.22E-106 T 23-04-2016 UPTC3659_RS07170 0fcf77cffe5c4c35432c8a3b0c7b3cdc 444 PANTHER PTHR11616 6 444 7.8E-109 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS05550 05af03e55506abf3651bba4fe49b829b 325 SUPERFAMILY SSF55909 5 320 6.42E-108 T 23-04-2016 UPTC3659_RS05550 05af03e55506abf3651bba4fe49b829b 325 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 319 7.1E-103 T 23-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 UPTC3659_RS05550 05af03e55506abf3651bba4fe49b829b 325 PANTHER PTHR31377 6 325 2.7E-96 T 23-04-2016 UPTC3659_RS05550 05af03e55506abf3651bba4fe49b829b 325 Gene3D G3DSA:3.75.10.10 5 319 1.6E-114 T 23-04-2016 UPTC3659_RS05550 05af03e55506abf3651bba4fe49b829b 325 PANTHER PTHR31377:SF0 6 325 2.7E-96 T 23-04-2016 UPTC3659_RS07735 04d41bcbcda26b05d5f13e93e745df92 198 SUPERFAMILY SSF52833 3 194 2.54E-62 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS07735 04d41bcbcda26b05d5f13e93e745df92 198 Gene3D G3DSA:3.40.30.10 3 159 3.9E-58 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS07735 04d41bcbcda26b05d5f13e93e745df92 198 PANTHER PTHR10681 1 193 1.6E-76 T 23-04-2016 UPTC3659_RS07735 04d41bcbcda26b05d5f13e93e745df92 198 PIRSF PIRSF000239 1 197 7.2E-57 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 UPTC3659_RS07735 04d41bcbcda26b05d5f13e93e745df92 198 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 193 4.9E-10 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 UPTC3659_RS07735 04d41bcbcda26b05d5f13e93e745df92 198 Pfam PF00578 AhpC/TSA family 4 137 3.9E-31 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 UPTC3659_RS07735 04d41bcbcda26b05d5f13e93e745df92 198 Gene3D G3DSA:3.30.1020.10 160 193 5.9E-12 T 23-04-2016 UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 SUPERFAMILY SSF48024 6 106 1.05E-17 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 PANTHER PTHR30153 8 388 4.7E-124 T 23-04-2016 UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 PANTHER PTHR30153 410 458 4.7E-124 T 23-04-2016 UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 SMART SM00382 189 386 2.0E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 448 7.1E-127 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 Gene3D G3DSA:3.40.50.300 166 448 2.1E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 Pfam PF03796 DnaB-like helicase C terminal domain 172 446 1.5E-93 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 Pfam PF00772 DnaB-like helicase N terminal domain 9 98 9.7E-12 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 Gene3D G3DSA:1.10.860.10 9 93 3.3E-11 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 SUPERFAMILY SSF52540 415 441 1.01E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07295 a2cedc04339a20535e01ba52770d78a2 461 SUPERFAMILY SSF52540 172 384 1.01E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02255 a1edcbfa61b34e82f8370237ec57e60a 438 PANTHER PTHR11119 3 409 5.8E-123 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS02255 a1edcbfa61b34e82f8370237ec57e60a 438 PANTHER PTHR11119:SF9 3 409 5.8E-123 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 UPTC3659_RS02255 a1edcbfa61b34e82f8370237ec57e60a 438 Pfam PF00860 Permease family 16 399 6.7E-36 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 Gene3D G3DSA:3.50.50.60 366 505 1.6E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 Gene3D G3DSA:3.50.50.60 77 189 1.6E-29 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 Pfam PF01593 Flavin containing amine oxidoreductase 533 631 4.7E-6 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 Pfam PF13450 NAD(P)-binding Rossmann-like domain 83 144 4.0E-12 T 23-04-2016 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 PANTHER PTHR10742 277 632 1.6E-80 T 23-04-2016 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 PANTHER PTHR10742 2 242 1.6E-80 T 23-04-2016 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 PANTHER PTHR10742:SF255 277 632 1.6E-80 T 23-04-2016 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 PANTHER PTHR10742:SF255 2 242 1.6E-80 T 23-04-2016 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 SUPERFAMILY SSF51905 375 419 8.46E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS06480 4be48e2c3e54a28faa31d207fc651fd9 633 SUPERFAMILY SSF51905 77 348 8.46E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 Pfam PF00164 Ribosomal protein S12/S23 3 123 7.0E-42 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 PIRSF PIRSF002133 1 124 1.8E-53 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 124 3.0E-69 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.7E-58 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.818 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 Gene3D G3DSA:2.40.50.140 2 124 7.6E-64 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 PANTHER PTHR11652 2 116 1.4E-68 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02370 d90e677ecfd24e78088ffb54aa2f0f40 127 SUPERFAMILY SSF50249 2 123 1.11E-50 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS03145 da5c7e51f657bff251e34cfa694a2f62 268 SMART SM00271 202 265 8.0E-12 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS03145 da5c7e51f657bff251e34cfa694a2f62 268 Gene3D G3DSA:1.10.287.110 201 263 6.0E-14 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS03145 da5c7e51f657bff251e34cfa694a2f62 268 SUPERFAMILY SSF46565 201 262 7.72E-14 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS03145 da5c7e51f657bff251e34cfa694a2f62 268 Pfam PF00226 DnaJ domain 203 262 5.2E-10 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS06730 187e8a9f619d1f9c802f288165ea5a2d 152 Gene3D G3DSA:3.40.50.270 1 151 1.8E-47 T 23-04-2016 UPTC3659_RS06730 187e8a9f619d1f9c802f288165ea5a2d 152 SUPERFAMILY SSF52788 1 146 7.85E-43 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily UPTC3659_RS06730 187e8a9f619d1f9c802f288165ea5a2d 152 PANTHER PTHR11717 3 150 1.5E-32 T 23-04-2016 UPTC3659_RS06730 187e8a9f619d1f9c802f288165ea5a2d 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 3.6E-33 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily UPTC3659_RS06730 187e8a9f619d1f9c802f288165ea5a2d 152 PANTHER PTHR11717:SF7 3 150 1.5E-32 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 UPTC3659_RS06730 187e8a9f619d1f9c802f288165ea5a2d 152 SMART SM00226 2 148 1.3E-31 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily UPTC3659_RS06730 187e8a9f619d1f9c802f288165ea5a2d 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 5.5E-12 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 UPTC3659_RS06730 187e8a9f619d1f9c802f288165ea5a2d 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 5.5E-12 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 UPTC3659_RS06730 187e8a9f619d1f9c802f288165ea5a2d 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 5.5E-12 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Pfam PF00012 Hsp70 protein 4 600 4.6E-248 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Gene3D G3DSA:3.30.30.30 53 105 3.7E-19 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Gene3D G3DSA:3.30.420.40 4 52 2.2E-65 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Gene3D G3DSA:3.30.420.40 118 190 2.2E-65 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 617 35.794 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PANTHER PTHR19375:SF173 2 620 0.0 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 SUPERFAMILY SSF100934 501 601 6.67E-16 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PANTHER PTHR19375 2 620 0.0 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Gene3D G3DSA:3.30.420.40 191 223 4.0E-32 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Gene3D G3DSA:3.30.420.40 313 354 4.0E-32 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 600 1.9E-289 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 SUPERFAMILY SSF53067 2 182 1.78E-61 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Gene3D G3DSA:3.90.640.10 224 307 8.1E-30 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 SUPERFAMILY SSF100920 378 534 1.7E-62 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Gene3D G3DSA:1.20.1270.10 526 599 6.9E-27 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.2E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PRINTS PR00301 70kDa heat shock protein signature 463 479 3.2E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.2E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PRINTS PR00301 70kDa heat shock protein signature 196 206 3.2E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PRINTS PR00301 70kDa heat shock protein signature 328 344 3.2E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PRINTS PR00301 70kDa heat shock protein signature 359 379 3.2E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.2E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.2E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 PRINTS PR00301 70kDa heat shock protein signature 382 401 3.2E-77 T 23-04-2016 IPR013126 Heat shock protein 70 family UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 SUPERFAMILY SSF53067 185 375 2.72E-64 T 23-04-2016 UPTC3659_RS05765 fb3d2abac0f12431b7469ec83e7e4a16 620 Gene3D G3DSA:2.60.34.10 384 525 5.1E-71 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain UPTC3659_RS07795 2a5eb0e2e9c93815b3052e195fcc5262 147 PANTHER PTHR30353 5 143 5.1E-25 T 23-04-2016 IPR032818 DedA family UPTC3659_RS07795 2a5eb0e2e9c93815b3052e195fcc5262 147 PANTHER PTHR30353:SF12 5 143 5.1E-25 T 23-04-2016 UPTC3659_RS05225 2bc78e3bc1651a55eb04e1f24c24dd8b 349 PANTHER PTHR24198 124 287 6.5E-19 T 23-04-2016 UPTC3659_RS05225 2bc78e3bc1651a55eb04e1f24c24dd8b 349 Pfam PF12796 Ankyrin repeats (3 copies) 166 260 4.0E-8 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05225 2bc78e3bc1651a55eb04e1f24c24dd8b 349 Gene3D G3DSA:1.25.40.20 123 288 4.0E-20 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05225 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SUPERFAMILY SSF48403 122 287 2.07E-19 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05225 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SMART SM00248 188 219 1300.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05225 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SMART SM00248 152 184 28.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05225 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SMART SM00248 105 138 1400.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05225 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SMART SM00248 230 259 0.011 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05160 2bc78e3bc1651a55eb04e1f24c24dd8b 349 PANTHER PTHR24198 124 287 6.5E-19 T 23-04-2016 UPTC3659_RS05160 2bc78e3bc1651a55eb04e1f24c24dd8b 349 Pfam PF12796 Ankyrin repeats (3 copies) 166 260 4.0E-8 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05160 2bc78e3bc1651a55eb04e1f24c24dd8b 349 Gene3D G3DSA:1.25.40.20 123 288 4.0E-20 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05160 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SUPERFAMILY SSF48403 122 287 2.07E-19 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05160 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SMART SM00248 188 219 1300.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05160 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SMART SM00248 152 184 28.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05160 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SMART SM00248 105 138 1400.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05160 2bc78e3bc1651a55eb04e1f24c24dd8b 349 SMART SM00248 230 259 0.011 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS02170 4decc559210f892897a892b2b3d17ed1 226 SUPERFAMILY SSF51351 2 223 6.68E-61 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 UPTC3659_RS02170 4decc559210f892897a892b2b3d17ed1 226 PANTHER PTHR21139 1 221 4.3E-49 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 UPTC3659_RS02170 4decc559210f892897a892b2b3d17ed1 226 ProSitePatterns PS00171 Triosephosphate isomerase active site. 149 159 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 UPTC3659_RS02170 4decc559210f892897a892b2b3d17ed1 226 Gene3D G3DSA:3.20.20.70 2 224 3.3E-59 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS02170 4decc559210f892897a892b2b3d17ed1 226 Pfam PF00121 Triosephosphate isomerase 2 221 2.4E-57 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 UPTC3659_RS02170 4decc559210f892897a892b2b3d17ed1 226 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 224 27.981 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 SUPERFAMILY SSF82866 804 1030 3.27E-46 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 Gene3D G3DSA:3.30.70.1430 40 138 1.1E-31 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 Gene3D G3DSA:3.30.2090.10 183 276 3.2E-24 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 Gene3D G3DSA:3.30.2090.10 719 807 3.1E-19 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 SUPERFAMILY SSF82693 40 132 4.36E-26 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 Pfam PF00873 AcrB/AcrD/AcrF family 2 1024 0.0 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 SUPERFAMILY SSF82693 565 668 6.8E-22 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 SUPERFAMILY SSF82693 137 183 1.31E-24 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 SUPERFAMILY SSF82693 276 332 1.31E-24 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 Gene3D G3DSA:3.30.70.1430 567 668 2.1E-22 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 Gene3D G3DSA:1.20.1640.10 294 505 7.6E-59 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1027 0.0 T 23-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 SUPERFAMILY SSF82866 298 501 5.75E-50 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 SUPERFAMILY SSF82714 719 805 3.14E-17 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.3E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 2.3E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.3E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.3E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 2.3E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 2.3E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.3E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 2.3E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 2.3E-93 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 SUPERFAMILY SSF82714 184 273 1.31E-18 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 Gene3D G3DSA:1.10.3850.10 811 1025 7.4E-56 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PANTHER PTHR32063:SF27 1 1038 0.0 T 23-04-2016 UPTC3659_RS08860 16e0d7ecdc653c789559931d60368800 1040 PANTHER PTHR32063 1 1038 0.0 T 23-04-2016 UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 238 249 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 Gene3D G3DSA:3.30.70.20 206 270 7.3E-13 T 23-04-2016 UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 Pfam PF13237 4Fe-4S dicluster domain 416 465 2.5E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 PANTHER PTHR24960:SF43 190 259 1.8E-26 T 23-04-2016 UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 PANTHER PTHR24960:SF43 416 549 1.8E-26 T 23-04-2016 UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 Pfam PF12838 4Fe-4S dicluster domain 208 252 2.9E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 Gene3D G3DSA:3.30.70.20 411 476 3.7E-13 T 23-04-2016 UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 PANTHER PTHR24960 190 259 1.8E-26 T 23-04-2016 UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 PANTHER PTHR24960 416 549 1.8E-26 T 23-04-2016 UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 SUPERFAMILY SSF54862 198 259 1.28E-24 T 23-04-2016 UPTC3659_RS07565 693ef7705d44cb411ffc89b658d135ac 550 SUPERFAMILY SSF54862 415 519 1.28E-24 T 23-04-2016 UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 Gene3D G3DSA:3.30.565.10 267 404 1.9E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 352 5.0E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 406 5.0E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 387 5.0E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 366 5.0E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 Pfam PF00512 His Kinase A (phospho-acceptor) domain 199 258 1.0E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 Gene3D G3DSA:1.10.287.130 191 253 9.6E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 406 1.1E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 SMART SM00387 305 407 8.7E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 SMART SM00388 198 262 0.0023 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 SUPERFAMILY SSF55874 266 405 6.94E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 PANTHER PTHR24423 196 405 4.5E-42 T 23-04-2016 UPTC3659_RS06620 3a23b62251f3e830f56fdb27cc99e70c 407 SUPERFAMILY SSF47384 183 255 2.35E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 SUPERFAMILY SSF46894 130 222 8.79E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 SMART SM00448 2 111 6.7E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 PANTHER PTHR26402:SF292 2 222 2.4E-61 T 23-04-2016 UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 Gene3D G3DSA:3.40.50.2300 2 121 4.0E-31 T 23-04-2016 UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 SUPERFAMILY SSF52172 1 125 5.27E-33 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 PANTHER PTHR26402 2 222 2.4E-61 T 23-04-2016 UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 Pfam PF00072 Response regulator receiver domain 4 111 9.4E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 3.4E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 Gene3D G3DSA:1.10.10.10 124 221 3.0E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS02625 aa79bfeb8190d16f1ee051e524f7e759 223 SMART SM00862 145 221 2.4E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 Pfam PF01568 Molydopterin dinucleotide binding domain 654 774 1.0E-27 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 PANTHER PTHR11615 55 798 8.8E-202 T 23-04-2016 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 SUPERFAMILY SSF50692 648 797 3.63E-43 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 PANTHER PTHR11615:SF19 55 798 8.8E-202 T 23-04-2016 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 Gene3D G3DSA:3.40.50.740 385 482 3.4E-32 T 23-04-2016 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 Gene3D G3DSA:3.40.50.740 79 177 3.4E-32 T 23-04-2016 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 Gene3D G3DSA:3.90.55.10 483 583 1.2E-26 T 23-04-2016 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 693 720 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 Gene3D G3DSA:3.40.228.10 199 384 7.6E-52 T 23-04-2016 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 SUPERFAMILY SSF53706 41 656 1.57E-149 T 23-04-2016 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 Gene3D G3DSA:2.40.40.20 628 783 1.5E-57 T 23-04-2016 UPTC3659_RS02265 e4c30ef389788ac0f1ee1aa3673c81e1 799 Pfam PF00384 Molybdopterin oxidoreductase 86 539 9.4E-67 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SUPERFAMILY SSF48452 376 732 1.33E-37 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SUPERFAMILY SSF48452 194 361 2.28E-35 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Gene3D G3DSA:1.25.40.10 383 493 1.3E-16 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Pfam PF13181 Tetratricopeptide repeat 265 295 3.5E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Pfam PF13181 Tetratricopeptide repeat 597 625 0.027 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Pfam PF13181 Tetratricopeptide repeat 529 561 0.011 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Pfam PF13181 Tetratricopeptide repeat 631 662 2.0E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Pfam PF13181 Tetratricopeptide repeat 130 160 0.012 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Pfam PF13432 Tetratricopeptide repeat 301 358 9.8E-5 T 23-04-2016 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Gene3D G3DSA:1.25.40.120 97 369 6.1E-45 T 23-04-2016 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Gene3D G3DSA:1.25.40.10 496 767 6.6E-50 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 PANTHER PTHR23083 87 166 2.2E-81 T 23-04-2016 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 PANTHER PTHR23083 504 727 2.2E-81 T 23-04-2016 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 PANTHER PTHR23083 383 426 2.2E-81 T 23-04-2016 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 PANTHER PTHR23083 200 364 2.2E-81 T 23-04-2016 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 630 663 0.08 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 528 561 0.21 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 60 93 6.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 94 127 0.47 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 596 629 0.61 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 664 697 0.37 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 383 416 3.2E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 331 364 0.099 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 562 595 0.6 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 195 228 1.9E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 457 490 23.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 732 765 0.23 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 229 262 0.034 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 494 527 120.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 417 450 11.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 128 161 0.0011 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 263 296 9.8E-5 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 698 731 0.0051 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SMART SM00028 297 330 0.74 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Pfam PF13176 Tetratricopeptide repeat 200 227 0.0016 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Pfam PF13176 Tetratricopeptide repeat 701 733 0.015 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Gene3D G3DSA:1.25.40.10 60 96 0.001 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 Pfam PF13414 TPR repeat 390 426 1.4E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02195 7603ae0de9bcb38b222ce5bf61a32049 790 SUPERFAMILY SSF48452 21 241 5.25E-29 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS08520 192fc2c5375f3899f73df411c23b435a 347 SUPERFAMILY SSF56059 111 168 3.71E-21 T 23-04-2016 UPTC3659_RS08520 192fc2c5375f3899f73df411c23b435a 347 SUPERFAMILY SSF56059 199 342 3.71E-21 T 23-04-2016 UPTC3659_RS01940 9731f3832fff704ceb9a7b281e63f765 172 Pfam PF03448 MgtE intracellular N domain 98 163 7.5E-7 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain UPTC3659_RS01940 9731f3832fff704ceb9a7b281e63f765 172 Gene3D G3DSA:1.25.60.10 83 163 9.2E-6 T 23-04-2016 UPTC3659_RS01940 9731f3832fff704ceb9a7b281e63f765 172 SUPERFAMILY SSF158791 106 162 2.09E-8 T 23-04-2016 UPTC3659_RS04020 7bdb69d8070f820ef08482ac216404e9 352 Pfam PF01761 3-dehydroquinate synthase 57 317 1.9E-99 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 UPTC3659_RS04020 7bdb69d8070f820ef08482ac216404e9 352 Gene3D G3DSA:3.40.50.1970 24 162 9.4E-55 T 23-04-2016 UPTC3659_RS04020 7bdb69d8070f820ef08482ac216404e9 352 Gene3D G3DSA:1.20.1090.10 163 348 9.7E-58 T 23-04-2016 UPTC3659_RS04020 7bdb69d8070f820ef08482ac216404e9 352 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 350 37.63 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 UPTC3659_RS04020 7bdb69d8070f820ef08482ac216404e9 352 SUPERFAMILY SSF56796 19 348 5.63E-98 T 23-04-2016 UPTC3659_RS04020 7bdb69d8070f820ef08482ac216404e9 352 PANTHER PTHR21090 1 352 7.9E-139 T 23-04-2016 UPTC3659_RS04020 7bdb69d8070f820ef08482ac216404e9 352 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 15 347 3.1E-114 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 UPTC3659_RS04020 7bdb69d8070f820ef08482ac216404e9 352 PIRSF PIRSF001455 1 352 4.3E-102 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 PANTHER PTHR11444:SF1 1 462 6.8E-243 T 23-04-2016 UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 SUPERFAMILY SSF48557 3 461 1.52E-156 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 460 2.4E-245 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 Gene3D G3DSA:1.10.275.10 1 137 6.6E-63 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 Pfam PF00206 Lyase 11 341 1.5E-114 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.7E-30 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 1.7E-30 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.7E-30 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 1.7E-30 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 89.705 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 Pfam PF10415 Fumarase C C-terminus 407 460 3.5E-24 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 Gene3D G3DSA:1.10.40.30 416 462 9.0E-31 T 23-04-2016 UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 PANTHER PTHR11444 1 462 6.8E-243 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 UPTC3659_RS02235 db9f4f469df9dbbb9c8f1a7f84a685a5 463 Gene3D G3DSA:1.20.200.10 138 415 4.9E-102 T 23-04-2016 UPTC3659_RS06800 bdd2b92af8379d1e2f79172785963d2c 185 SUPERFAMILY SSF52833 31 184 7.86E-35 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS06800 bdd2b92af8379d1e2f79172785963d2c 185 PANTHER PTHR12151:SF0 40 185 8.5E-33 T 23-04-2016 UPTC3659_RS06800 bdd2b92af8379d1e2f79172785963d2c 185 Gene3D G3DSA:3.40.30.10 11 184 4.5E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS06800 bdd2b92af8379d1e2f79172785963d2c 185 Pfam PF02630 SCO1/SenC 28 166 3.4E-28 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC UPTC3659_RS06800 bdd2b92af8379d1e2f79172785963d2c 185 PANTHER PTHR12151 40 185 8.5E-33 T 23-04-2016 IPR003782 Copper chaperone SCO1/SenC UPTC3659_RS08850 86f224d33ecb1224cefecf783219fe49 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 4.8E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UPTC3659_RS08850 86f224d33ecb1224cefecf783219fe49 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 4.8E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UPTC3659_RS08850 86f224d33ecb1224cefecf783219fe49 207 Gene3D G3DSA:1.10.10.60 7 58 2.4E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 UPTC3659_RS08850 86f224d33ecb1224cefecf783219fe49 207 SUPERFAMILY SSF46689 3 69 1.33E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 UPTC3659_RS08850 86f224d33ecb1224cefecf783219fe49 207 Gene3D G3DSA:1.10.357.10 59 202 3.3E-12 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 UPTC3659_RS08850 86f224d33ecb1224cefecf783219fe49 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 3.1E-10 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 Pfam PF08544 GHMP kinases C terminal 219 275 2.1E-6 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 SUPERFAMILY SSF54211 1 150 5.09E-28 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 SUPERFAMILY SSF55060 159 277 2.88E-28 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 Gene3D G3DSA:3.30.230.10 1 149 3.0E-46 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 23-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 PRINTS PR00958 Homoserine kinase signature 124 137 1.0E-29 T 23-04-2016 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 PRINTS PR00958 Homoserine kinase signature 8 23 1.0E-29 T 23-04-2016 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 PRINTS PR00958 Homoserine kinase signature 242 257 1.0E-29 T 23-04-2016 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 PRINTS PR00958 Homoserine kinase signature 163 180 1.0E-29 T 23-04-2016 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 PRINTS PR00958 Homoserine kinase signature 90 105 1.0E-29 T 23-04-2016 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 TIGRFAM TIGR00191 thrB: homoserine kinase 1 291 6.3E-83 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 Gene3D G3DSA:3.30.70.890 155 285 1.9E-36 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 Pfam PF00288 GHMP kinases N terminal domain 77 137 2.3E-10 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 PIRSF PIRSF000676 1 292 2.8E-86 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 PANTHER PTHR20861 1 281 3.1E-67 T 23-04-2016 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 Hamap MF_00384 Homoserine kinase [thrB]. 1 291 28.958 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 UPTC3659_RS01180 e1c792b6a0021b162b1ea422e2d0d705 292 PANTHER PTHR20861:SF1 1 281 3.1E-67 T 23-04-2016 UPTC3659_RS02145 4326b3d3a2686e289fe6f0ab4e118469 135 PIRSF PIRSF009554 1 135 5.1E-40 T 23-04-2016 IPR011194 Uncharacterised protein family UPF0306 UPTC3659_RS02145 4326b3d3a2686e289fe6f0ab4e118469 135 SUPERFAMILY SSF50475 2 122 1.07E-10 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 UPTC3659_RS02145 4326b3d3a2686e289fe6f0ab4e118469 135 Gene3D G3DSA:2.30.110.10 3 106 3.1E-7 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 SUPERFAMILY SSF52172 4 115 4.27E-13 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 SUPERFAMILY SSF52172 123 243 3.42E-19 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 PANTHER PTHR26402 123 240 3.3E-15 T 23-04-2016 UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 Gene3D G3DSA:3.40.50.2300 120 244 2.1E-19 T 23-04-2016 UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 Pfam PF00072 Response regulator receiver domain 133 236 8.8E-13 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 Pfam PF00072 Response regulator receiver domain 5 104 1.3E-7 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 Gene3D G3DSA:3.40.50.2300 4 118 7.9E-14 T 23-04-2016 UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 256 412 3.1E-24 T 23-04-2016 IPR000160 GGDEF domain UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 SMART SM00267 243 413 3.8E-12 T 23-04-2016 IPR000160 GGDEF domain UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 409 9.4E-23 T 23-04-2016 IPR000160 GGDEF domain UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 PANTHER PTHR26402:SF117 123 240 3.3E-15 T 23-04-2016 UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 SUPERFAMILY SSF55073 259 412 1.57E-25 T 23-04-2016 IPR029787 Nucleotide cyclase UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 Gene3D G3DSA:3.30.70.270 257 412 1.6E-29 T 23-04-2016 UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 SMART SM00448 124 236 9.9E-12 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS03745 2eef515a17b6131adf6924bdd741d21a 414 SMART SM00448 3 111 0.0024 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS06505 28ad1a0560b71c5a36ab519c2dd7e8e4 235 Gene3D G3DSA:3.30.70.980 134 200 4.0E-24 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 UPTC3659_RS06505 28ad1a0560b71c5a36ab519c2dd7e8e4 235 Gene3D G3DSA:1.10.10.200 1 77 8.0E-29 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like UPTC3659_RS06505 28ad1a0560b71c5a36ab519c2dd7e8e4 235 Pfam PF01709 Transcriptional regulator 5 234 7.8E-77 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like UPTC3659_RS06505 28ad1a0560b71c5a36ab519c2dd7e8e4 235 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 2.7E-79 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like UPTC3659_RS06505 28ad1a0560b71c5a36ab519c2dd7e8e4 235 SUPERFAMILY SSF75625 1 235 3.27E-76 T 23-04-2016 IPR029072 YebC-like UPTC3659_RS06505 28ad1a0560b71c5a36ab519c2dd7e8e4 235 Gene3D G3DSA:3.30.1270.10 80 133 3.6E-30 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 UPTC3659_RS06505 28ad1a0560b71c5a36ab519c2dd7e8e4 235 Gene3D G3DSA:3.30.1270.10 209 235 3.6E-30 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 UPTC3659_RS06505 28ad1a0560b71c5a36ab519c2dd7e8e4 235 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 235 27.87 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like UPTC3659_RS06505 28ad1a0560b71c5a36ab519c2dd7e8e4 235 PANTHER PTHR12532 1 235 7.1E-72 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like UPTC3659_RS01090 d1bf745f24336ddcfa4c5adb549dc724 329 Pfam PF13432 Tetratricopeptide repeat 222 274 9.9E-5 T 23-04-2016 UPTC3659_RS01090 d1bf745f24336ddcfa4c5adb549dc724 329 Gene3D G3DSA:1.25.40.10 222 323 4.4E-10 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS01090 d1bf745f24336ddcfa4c5adb549dc724 329 SUPERFAMILY SSF48452 218 323 6.32E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS07975 870ed5514fca0b0c5f3f7390ebffc788 234 Gene3D G3DSA:3.40.50.880 3 218 5.0E-65 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS07975 870ed5514fca0b0c5f3f7390ebffc788 234 Pfam PF03575 Peptidase family S51 4 209 5.9E-55 T 23-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 UPTC3659_RS07975 870ed5514fca0b0c5f3f7390ebffc788 234 PANTHER PTHR20842 4 210 1.3E-64 T 23-04-2016 UPTC3659_RS07975 870ed5514fca0b0c5f3f7390ebffc788 234 SUPERFAMILY SSF52317 3 214 1.83E-34 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS04280 02fda5ebe6e1c10e9967972493b8259a 253 PANTHER PTHR24220:SF471 3 250 4.8E-135 T 23-04-2016 UPTC3659_RS04280 02fda5ebe6e1c10e9967972493b8259a 253 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS04280 02fda5ebe6e1c10e9967972493b8259a 253 SUPERFAMILY SSF52540 1 226 1.39E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04280 02fda5ebe6e1c10e9967972493b8259a 253 Gene3D G3DSA:3.40.50.300 1 228 1.9E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04280 02fda5ebe6e1c10e9967972493b8259a 253 SMART SM00382 26 213 5.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS04280 02fda5ebe6e1c10e9967972493b8259a 253 Pfam PF00005 ABC transporter 17 164 1.3E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS04280 02fda5ebe6e1c10e9967972493b8259a 253 PANTHER PTHR24220 3 250 4.8E-135 T 23-04-2016 UPTC3659_RS08210 0f3ed2b4d7ce975d3911ab55a3117906 249 Pfam PF13394 4Fe-4S single cluster domain 22 151 1.3E-22 T 23-04-2016 UPTC3659_RS08210 0f3ed2b4d7ce975d3911ab55a3117906 249 SUPERFAMILY SSF102114 64 138 3.65E-6 T 23-04-2016 UPTC3659_RS08210 0f3ed2b4d7ce975d3911ab55a3117906 249 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 246 38.676 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 UPTC3659_RS08210 0f3ed2b4d7ce975d3911ab55a3117906 249 Gene3D G3DSA:3.20.20.70 19 172 1.5E-7 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS08210 0f3ed2b4d7ce975d3911ab55a3117906 249 PANTHER PTHR11228:SF33 74 242 5.0E-15 T 23-04-2016 UPTC3659_RS08210 0f3ed2b4d7ce975d3911ab55a3117906 249 PANTHER PTHR11228:SF33 1 52 5.0E-15 T 23-04-2016 UPTC3659_RS08210 0f3ed2b4d7ce975d3911ab55a3117906 249 PANTHER PTHR11228 74 242 5.0E-15 T 23-04-2016 UPTC3659_RS08210 0f3ed2b4d7ce975d3911ab55a3117906 249 PANTHER PTHR11228 1 52 5.0E-15 T 23-04-2016 UPTC3659_RS03625 674c55557fafc288ef09870e22c8a7fd 352 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 86 105 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 UPTC3659_RS03625 674c55557fafc288ef09870e22c8a7fd 352 Gene3D G3DSA:3.20.20.70 2 350 9.5E-108 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS03625 674c55557fafc288ef09870e22c8a7fd 352 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 287 307 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 UPTC3659_RS03625 674c55557fafc288ef09870e22c8a7fd 352 Pfam PF01180 Dihydroorotate dehydrogenase 51 335 2.9E-73 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 UPTC3659_RS03625 674c55557fafc288ef09870e22c8a7fd 352 PANTHER PTHR11938 1 348 8.7E-56 T 23-04-2016 UPTC3659_RS03625 674c55557fafc288ef09870e22c8a7fd 352 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 5 350 4.8E-111 T 23-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS03625 674c55557fafc288ef09870e22c8a7fd 352 PANTHER PTHR11938:SF47 1 348 8.7E-56 T 23-04-2016 UPTC3659_RS03625 674c55557fafc288ef09870e22c8a7fd 352 SUPERFAMILY SSF51395 1 350 2.2E-91 T 23-04-2016 UPTC3659_RS03625 674c55557fafc288ef09870e22c8a7fd 352 PIRSF PIRSF000164 17 352 2.4E-99 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 Pfam PF00390 Malic enzyme, N-terminal domain 17 107 4.9E-19 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 Pfam PF00390 Malic enzyme, N-terminal domain 109 145 9.4E-6 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 Gene3D G3DSA:3.40.50.10380 9 154 5.5E-46 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 ProSitePatterns PS00331 Malic enzymes signature. 153 169 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 SMART SM00919 157 391 3.2E-134 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 PIRSF PIRSF000106 43 409 1.0E-67 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 SMART SM01274 13 146 7.1E-74 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 PANTHER PTHR23406:SF23 16 396 7.1E-161 T 23-04-2016 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 SUPERFAMILY SSF53223 7 155 4.24E-48 T 23-04-2016 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 Gene3D G3DSA:3.40.50.720 155 400 2.2E-81 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 Pfam PF03949 Malic enzyme, NAD binding domain 159 350 3.7E-24 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 PANTHER PTHR23406 16 396 7.1E-161 T 23-04-2016 UPTC3659_RS07600 8a1447b27293b3fa86af1925a3ec97bb 411 SUPERFAMILY SSF51735 157 406 1.04E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 Gene3D G3DSA:3.30.300.30 410 500 2.1E-24 T 23-04-2016 UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 Gene3D G3DSA:3.40.50.980 160 323 2.4E-39 T 23-04-2016 UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 424 488 8.5E-6 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 31 439 1.4E-100 T 23-04-2016 IPR010071 Amino acid adenylation domain UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 152 163 - T 23-04-2016 IPR020845 AMP-binding, conserved site UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 Pfam PF00501 AMP-binding enzyme 10 415 1.1E-70 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 Gene3D G3DSA:3.40.50.980 4 159 1.4E-30 T 23-04-2016 UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 SUPERFAMILY SSF56801 4 500 2.75E-111 T 23-04-2016 UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 PANTHER PTHR24095 5 488 1.8E-128 T 23-04-2016 UPTC3659_RS07645 fc638e3c6b2a41104161864e6ef34fec 502 Gene3D G3DSA:2.30.38.10 324 403 7.3E-19 T 23-04-2016 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 184 200 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 Gene3D G3DSA:1.10.1670.10 121 205 6.5E-30 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 SMART SM00525 183 203 1.1E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 PIRSF PIRSF001435 1 207 4.0E-43 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 Gene3D G3DSA:1.10.340.30 21 120 1.6E-31 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 SMART SM00478 36 182 1.1E-46 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 PANTHER PTHR10359 18 208 2.4E-64 T 23-04-2016 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 SUPERFAMILY SSF48150 5 205 4.4E-62 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 TIGRFAM TIGR01083 nth: endonuclease III 3 191 6.1E-69 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 165 2.4E-23 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 184 200 4.9E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 UPTC3659_RS05650 98fadb44eb600ecda3ade36e8ed93c2c 208 Hamap MF_00942 Endonuclease III [nth]. 1 206 33.82 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 UPTC3659_RS06520 f58f2751401f65b66eb7be127fc20937 203 Pfam PF09335 SNARE associated Golgi protein 34 160 2.1E-23 T 23-04-2016 IPR032816 SNARE associated Golgi protein UPTC3659_RS06520 f58f2751401f65b66eb7be127fc20937 203 PANTHER PTHR30353 4 198 8.2E-56 T 23-04-2016 IPR032818 DedA family UPTC3659_RS06520 f58f2751401f65b66eb7be127fc20937 203 PANTHER PTHR30353:SF13 4 198 8.2E-56 T 23-04-2016 UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 Pfam PF16193 AAA C-terminal domain 163 236 9.8E-13 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 PANTHER PTHR13779 4 395 1.2E-109 T 23-04-2016 UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 Gene3D G3DSA:3.40.50.300 6 135 2.8E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 116 2.7E-14 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 SUPERFAMILY SSF52540 3 203 2.65E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 PANTHER PTHR13779:SF32 4 395 1.2E-109 T 23-04-2016 UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 Gene3D G3DSA:1.20.272.10 220 316 8.0E-39 T 23-04-2016 UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 Pfam PF12002 MgsA AAA+ ATPase C terminal 237 390 1.2E-50 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 Gene3D G3DSA:1.10.3710.10 318 384 1.3E-14 T 23-04-2016 UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 Gene3D G3DSA:1.10.8.60 136 208 1.6E-7 T 23-04-2016 UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 SUPERFAMILY SSF48019 222 394 5.5E-53 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 UPTC3659_RS08900 420ea4bba9de4d934477f6e4075eafbd 396 SMART SM00382 34 147 1.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 556 1.1E-17 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 259 273 1.1E-17 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 617 1.1E-17 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 633 1.1E-17 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 408 422 1.1E-17 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 144 704 2.6E-144 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 126 705 2.6E-140 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 SUPERFAMILY SSF81653 216 309 5.49E-17 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 SUPERFAMILY SSF81665 310 402 1.44E-9 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 SUPERFAMILY SSF81665 647 690 1.44E-9 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PANTHER PTHR24093:SF50 3 707 1.2E-165 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 Pfam PF00122 E1-E2 ATPase 179 399 4.7E-54 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 Pfam PF00403 Heavy-metal-associated domain 6 65 3.2E-10 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 SUPERFAMILY SSF55008 1 68 3.27E-12 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 Pfam PF00702 haloacid dehalogenase-like hydrolase 404 610 4.8E-28 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 Gene3D G3DSA:3.40.50.1000 519 667 1.4E-40 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 Gene3D G3DSA:3.40.50.1000 384 424 1.4E-40 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 SUPERFAMILY SSF56784 474 702 2.18E-42 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 SUPERFAMILY SSF56784 407 426 2.18E-42 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 180 690 5.7E-91 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PRINTS PR00943 Copper-transporting ATPase signature 576 593 4.9E-8 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PRINTS PR00943 Copper-transporting ATPase signature 129 148 4.9E-8 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PRINTS PR00943 Copper-transporting ATPase signature 178 197 4.9E-8 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PRINTS PR00943 Copper-transporting ATPase signature 332 346 4.9E-8 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 Gene3D G3DSA:2.70.150.10 203 309 1.4E-18 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 Gene3D G3DSA:3.30.70.100 1 67 1.0E-13 T 23-04-2016 UPTC3659_RS06490 e4967e3960e7db67dec985ed75dfdfcc 708 PANTHER PTHR24093 3 707 1.2E-165 T 23-04-2016 UPTC3659_RS00275 1deb11251197dbce7817a70df4c412b7 232 PANTHER PTHR10108 1 109 3.4E-12 T 23-04-2016 UPTC3659_RS00275 1deb11251197dbce7817a70df4c412b7 232 SUPERFAMILY SSF53335 2 175 1.67E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00275 1deb11251197dbce7817a70df4c412b7 232 Gene3D G3DSA:3.40.50.150 21 129 7.1E-22 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00275 1deb11251197dbce7817a70df4c412b7 232 Pfam PF13649 Methyltransferase domain 37 123 3.0E-14 T 23-04-2016 UPTC3659_RS00275 1deb11251197dbce7817a70df4c412b7 232 PANTHER PTHR10108:SF705 1 109 3.4E-12 T 23-04-2016 UPTC3659_RS00975 4221d131f70ee7f5054ee667f9c04711 105 SUPERFAMILY SSF55620 9 99 1.33E-17 T 23-04-2016 UPTC3659_RS00975 4221d131f70ee7f5054ee667f9c04711 105 TIGRFAM TIGR00526 folB_dom: FolB domain 8 94 9.9E-13 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 UPTC3659_RS00975 4221d131f70ee7f5054ee667f9c04711 105 SMART SM00905 5 103 7.2E-13 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 UPTC3659_RS00975 4221d131f70ee7f5054ee667f9c04711 105 Gene3D G3DSA:3.30.1130.10 9 98 3.8E-14 T 23-04-2016 UPTC3659_RS00975 4221d131f70ee7f5054ee667f9c04711 105 Pfam PF02152 Dihydroneopterin aldolase 9 98 3.9E-15 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 SMART SM00930 245 318 2.1E-21 T 23-04-2016 IPR018449 NIL domain UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 PANTHER PTHR24220:SF549 3 250 5.0E-120 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 SMART SM00382 26 220 3.2E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 Pfam PF09383 NIL domain 248 316 4.2E-17 T 23-04-2016 IPR018449 NIL domain UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 Gene3D G3DSA:3.30.70.260 231 317 2.0E-21 T 23-04-2016 UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 SUPERFAMILY SSF52540 1 233 7.78E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 Gene3D G3DSA:3.40.50.300 1 230 1.0E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 Pfam PF00005 ABC transporter 18 165 2.1E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 SUPERFAMILY SSF55021 231 318 1.6E-19 T 23-04-2016 UPTC3659_RS03705 92381c5cb5034b836c7f610968807dc8 318 PANTHER PTHR24220 3 250 5.0E-120 T 23-04-2016 UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 Pfam PF00106 short chain dehydrogenase 2 187 1.1E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 SUPERFAMILY SSF51735 2 224 9.22E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PANTHER PTHR24322 148 180 3.3E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 Gene3D G3DSA:3.40.50.720 2 232 2.4E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PANTHER PTHR24322:SF392 148 180 3.3E-57 T 23-04-2016 UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PANTHER PTHR24322 6 132 3.3E-57 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 8.3E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 8.3E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 8.3E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 202 222 9.4E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 9.4E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 9.4E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 9.4E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 9.4E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.4E-21 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS05945 cd98defef045a210ed3a6f921e20b85f 248 PANTHER PTHR24322:SF392 6 132 3.3E-57 T 23-04-2016 UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 SMART SM00490 687 771 2.8E-15 T 23-04-2016 IPR001650 Helicase, C-terminal UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 SMART SM00982 864 962 1.9E-20 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 SUPERFAMILY SSF141259 341 411 8.11E-19 T 23-04-2016 IPR003711 CarD-like/TRCF domain UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 Pfam PF02559 CarD-like/TRCF domain 343 437 1.3E-16 T 23-04-2016 IPR003711 CarD-like/TRCF domain UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 SUPERFAMILY SSF52540 388 644 6.54E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 9 958 23.671 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 SUPERFAMILY SSF143517 850 974 2.62E-21 T 23-04-2016 UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 Gene3D G3DSA:3.30.2060.10 101 174 1.7E-8 T 23-04-2016 UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 Pfam PF03461 TRCF domain 865 932 1.1E-15 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 SUPERFAMILY SSF52540 12 232 3.54E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 Gene3D G3DSA:3.40.50.300 449 647 6.9E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 SMART SM01058 342 439 1.2E-31 T 23-04-2016 IPR003711 CarD-like/TRCF domain UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 Gene3D G3DSA:3.40.50.300 661 813 7.6E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 SUPERFAMILY SSF52540 643 849 1.36E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 SMART SM00487 463 651 1.2E-27 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 Pfam PF00270 DEAD/DEAH box helicase 468 626 9.1E-16 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 Pfam PF00271 Helicase conserved C-terminal domain 666 770 1.7E-16 T 23-04-2016 IPR001650 Helicase, C-terminal UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 PANTHER PTHR14025 307 931 4.1E-226 T 23-04-2016 UPTC3659_RS06285 6efd236aae814d233fd051f6da041044 979 PANTHER PTHR14025:SF21 307 931 4.1E-226 T 23-04-2016 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 341 3.1E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 118 7.1E-36 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Pfam PF12631 MnmE helical domain 121 439 1.4E-28 T 23-04-2016 IPR025867 MnmE, helical domain UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Gene3D G3DSA:1.20.120.430 120 180 4.1E-38 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Gene3D G3DSA:1.20.120.430 245 269 4.1E-38 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Gene3D G3DSA:1.20.120.430 373 442 4.1E-38 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Gene3D G3DSA:3.40.50.300 288 347 5.6E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 284 302 6.5E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 217 237 6.5E-5 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 442 28.998 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 PANTHER PTHR11649 6 442 7.6E-113 T 23-04-2016 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 SUPERFAMILY SSF103025 2 118 4.79E-39 T 23-04-2016 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Gene3D G3DSA:3.30.1360.120 2 119 1.5E-40 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 SUPERFAMILY SSF52540 71 150 5.8E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 SUPERFAMILY SSF52540 186 340 5.8E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Pfam PF01926 50S ribosome-binding GTPase 216 331 1.7E-26 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 Gene3D G3DSA:3.40.50.300 209 244 4.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 442 6.3E-114 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 UPTC3659_RS02915 6ec0bc2c0e563648800210545b8b0b18 442 PANTHER PTHR11649:SF56 6 442 7.6E-113 T 23-04-2016 UPTC3659_RS00520 8acb1823ef3955cccc9e6556d708bf10 455 Pfam PF03313 Serine dehydratase alpha chain 190 448 1.1E-90 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit UPTC3659_RS00520 8acb1823ef3955cccc9e6556d708bf10 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 450 2.9E-178 T 23-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 UPTC3659_RS00520 8acb1823ef3955cccc9e6556d708bf10 455 Pfam PF03315 Serine dehydratase beta chain 4 153 4.5E-48 T 23-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 UPTC3659_RS00520 8acb1823ef3955cccc9e6556d708bf10 455 Gene3D G3DSA:3.30.1330.90 10 155 7.7E-47 T 23-04-2016 IPR029009 Allosteric substrate binding domain UPTC3659_RS00520 8acb1823ef3955cccc9e6556d708bf10 455 SUPERFAMILY SSF143548 16 155 1.18E-39 T 23-04-2016 IPR029009 Allosteric substrate binding domain UPTC3659_RS00520 8acb1823ef3955cccc9e6556d708bf10 455 PANTHER PTHR30182 1 453 5.5E-191 T 23-04-2016 UPTC3659_RS00520 8acb1823ef3955cccc9e6556d708bf10 455 PANTHER PTHR30182:SF1 1 453 5.5E-191 T 23-04-2016 UPTC3659_RS05495 76c59c0e7aa9132520630091e446edaf 484 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 11 482 3.5E-209 T 23-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath UPTC3659_RS05495 76c59c0e7aa9132520630091e446edaf 484 PANTHER PTHR35565 1 484 7.6E-270 T 23-04-2016 UPTC3659_RS05495 76c59c0e7aa9132520630091e446edaf 484 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 58 482 7.0E-174 T 23-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath UPTC3659_RS05495 76c59c0e7aa9132520630091e446edaf 484 PANTHER PTHR35565:SF1 1 484 7.6E-270 T 23-04-2016 UPTC3659_RS02980 46917f95077b2ae9a3199428784dae26 244 Pfam PF02600 Disulfide bond formation protein DsbB 16 206 3.2E-35 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 UPTC3659_RS02980 46917f95077b2ae9a3199428784dae26 244 SUPERFAMILY SSF158442 19 146 9.42E-24 T 23-04-2016 UPTC3659_RS02980 46917f95077b2ae9a3199428784dae26 244 SUPERFAMILY SSF158442 184 208 9.42E-24 T 23-04-2016 UPTC3659_RS02980 46917f95077b2ae9a3199428784dae26 244 PANTHER PTHR36570 185 225 4.4E-46 T 23-04-2016 UPTC3659_RS02980 46917f95077b2ae9a3199428784dae26 244 PANTHER PTHR36570 5 145 4.4E-46 T 23-04-2016 UPTC3659_RS02980 46917f95077b2ae9a3199428784dae26 244 Gene3D G3DSA:1.20.1550.10 184 221 8.6E-56 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain UPTC3659_RS02980 46917f95077b2ae9a3199428784dae26 244 Gene3D G3DSA:1.20.1550.10 8 146 8.6E-56 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain UPTC3659_RS02980 46917f95077b2ae9a3199428784dae26 244 PANTHER PTHR36570:SF1 185 225 4.4E-46 T 23-04-2016 UPTC3659_RS02980 46917f95077b2ae9a3199428784dae26 244 PANTHER PTHR36570:SF1 5 145 4.4E-46 T 23-04-2016 UPTC3659_RS01015 d98131cb83d4707526db58ac13d33865 211 Pfam PF03099 Biotin/lipoate A/B protein ligase family 9 116 4.6E-15 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 UPTC3659_RS01015 d98131cb83d4707526db58ac13d33865 211 PANTHER PTHR12835 1 184 1.0E-20 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 UPTC3659_RS01015 d98131cb83d4707526db58ac13d33865 211 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 2 205 2.8E-33 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 UPTC3659_RS01015 d98131cb83d4707526db58ac13d33865 211 Gene3D G3DSA:3.30.930.10 2 177 3.2E-33 T 23-04-2016 UPTC3659_RS01015 d98131cb83d4707526db58ac13d33865 211 SUPERFAMILY SSF55681 3 183 6.46E-36 T 23-04-2016 UPTC3659_RS00335 d293c3dca30e3c7c641fe09ebe13655f 163 PIRSF PIRSF000368 2 163 6.8E-51 T 23-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- UPTC3659_RS00335 d293c3dca30e3c7c641fe09ebe13655f 163 Pfam PF04055 Radical SAM superfamily 22 99 2.0E-8 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS00335 d293c3dca30e3c7c641fe09ebe13655f 163 Gene3D G3DSA:3.80.30.10 65 158 5.9E-15 T 23-04-2016 UPTC3659_RS00335 d293c3dca30e3c7c641fe09ebe13655f 163 Pfam PF13353 4Fe-4S single cluster domain 14 147 2.2E-37 T 23-04-2016 UPTC3659_RS00335 d293c3dca30e3c7c641fe09ebe13655f 163 PANTHER PTHR30352:SF2 3 162 3.8E-47 T 23-04-2016 UPTC3659_RS00335 d293c3dca30e3c7c641fe09ebe13655f 163 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 6 149 2.4E-45 T 23-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- UPTC3659_RS00335 d293c3dca30e3c7c641fe09ebe13655f 163 SUPERFAMILY SSF102114 21 102 1.1E-11 T 23-04-2016 UPTC3659_RS00335 d293c3dca30e3c7c641fe09ebe13655f 163 PANTHER PTHR30352 3 162 3.8E-47 T 23-04-2016 UPTC3659_RS00335 d293c3dca30e3c7c641fe09ebe13655f 163 ProSitePatterns PS01087 Radical activating enzymes signature. 16 37 - T 23-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 422 39.934 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PANTHER PTHR21256:SF14 1 426 3.0E-224 T 23-04-2016 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 225 257 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 Pfam PF00815 Histidinol dehydrogenase 24 422 1.3E-163 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PIRSF PIRSF000099 1 425 4.1E-161 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 Gene3D G3DSA:3.40.50.1980 27 235 1.2E-74 T 23-04-2016 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 SUPERFAMILY SSF53720 4 422 2.16E-83 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 2.8E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.8E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PRINTS PR00083 Histidinol dehydrogenase signature 225 246 2.8E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PRINTS PR00083 Histidinol dehydrogenase signature 106 133 2.8E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PRINTS PR00083 Histidinol dehydrogenase signature 315 340 2.8E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 2.8E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PRINTS PR00083 Histidinol dehydrogenase signature 247 266 2.8E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PRINTS PR00083 Histidinol dehydrogenase signature 356 374 2.8E-90 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 PANTHER PTHR21256 1 426 3.0E-224 T 23-04-2016 UPTC3659_RS00585 542f3da0ec56f74a39ab20e003a54508 426 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 421 8.6E-159 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 UPTC3659_RS07995 0347d1f280960f40dec2a7951a963155 255 PANTHER PTHR30627 25 196 4.3E-21 T 23-04-2016 UPTC3659_RS07995 0347d1f280960f40dec2a7951a963155 255 Gene3D G3DSA:3.40.710.10 20 248 6.2E-59 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS07995 0347d1f280960f40dec2a7951a963155 255 Pfam PF00905 Penicillin binding protein transpeptidase domain 33 230 1.4E-19 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UPTC3659_RS07995 0347d1f280960f40dec2a7951a963155 255 PANTHER PTHR30627:SF6 25 196 4.3E-21 T 23-04-2016 UPTC3659_RS07995 0347d1f280960f40dec2a7951a963155 255 SUPERFAMILY SSF56601 14 248 8.37E-28 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS02825 a8704229f56e2bdc8304d7023bd29bcb 299 PANTHER PTHR11228 3 208 4.2E-32 T 23-04-2016 UPTC3659_RS02825 a8704229f56e2bdc8304d7023bd29bcb 299 Pfam PF13394 4Fe-4S single cluster domain 25 118 2.1E-5 T 23-04-2016 UPTC3659_RS02825 a8704229f56e2bdc8304d7023bd29bcb 299 SUPERFAMILY SSF102114 25 240 5.23E-19 T 23-04-2016 UPTC3659_RS02825 a8704229f56e2bdc8304d7023bd29bcb 299 Gene3D G3DSA:3.20.20.70 24 234 5.6E-18 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS02825 a8704229f56e2bdc8304d7023bd29bcb 299 PANTHER PTHR11228:SF25 3 208 4.2E-32 T 23-04-2016 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 PANTHER PTHR11699:SF18 485 958 4.7E-91 T 23-04-2016 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 760 771 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 732 739 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 SUPERFAMILY SSF53720 470 957 2.75E-94 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 Gene3D G3DSA:3.20.20.220 124 459 2.4E-66 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 SUPERFAMILY SSF51730 132 457 6.28E-70 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 Gene3D G3DSA:3.40.605.10 517 747 3.2E-42 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 PIRSF PIRSF000197 1 1165 0.0 T 23-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 Gene3D G3DSA:3.40.309.10 748 938 2.0E-41 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 Pfam PF00171 Aldehyde dehydrogenase family 517 958 2.3E-104 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 Pfam PF01619 Proline dehydrogenase 125 417 2.1E-63 T 23-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 UPTC3659_RS01905 9fc6137ba2212d6a25cb9c2234a52a41 1165 PANTHER PTHR11699 485 958 4.7E-91 T 23-04-2016 UPTC3659_RS07555 54854c70c8bc69afee91d4d86437794f 284 Pfam PF00005 ABC transporter 20 155 1.1E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS07555 54854c70c8bc69afee91d4d86437794f 284 SMART SM00382 27 205 6.7E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS07555 54854c70c8bc69afee91d4d86437794f 284 Gene3D G3DSA:3.40.50.300 20 234 1.0E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07555 54854c70c8bc69afee91d4d86437794f 284 PANTHER PTHR24220 21 216 7.3E-71 T 23-04-2016 UPTC3659_RS07555 54854c70c8bc69afee91d4d86437794f 284 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS07555 54854c70c8bc69afee91d4d86437794f 284 SUPERFAMILY SSF52540 7 220 1.08E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04335 298c04a1b4977fc34ceaa1ef25c0c8d8 205 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 12 205 7.2E-48 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 UPTC3659_RS04335 298c04a1b4977fc34ceaa1ef25c0c8d8 205 Gene3D G3DSA:3.20.20.10 12 204 5.5E-58 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS04335 298c04a1b4977fc34ceaa1ef25c0c8d8 205 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 62 76 - T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 UPTC3659_RS04335 298c04a1b4977fc34ceaa1ef25c0c8d8 205 SUPERFAMILY SSF51419 12 204 6.15E-56 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS04335 298c04a1b4977fc34ceaa1ef25c0c8d8 205 Pfam PF01168 Alanine racemase, N-terminal domain 2 204 1.7E-14 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS04335 298c04a1b4977fc34ceaa1ef25c0c8d8 205 PIRSF PIRSF004848 1 205 1.1E-55 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 UPTC3659_RS04335 298c04a1b4977fc34ceaa1ef25c0c8d8 205 PANTHER PTHR10146 13 204 2.0E-54 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 UPTC3659_RS07330 e1093db9ea72227cf4579903a485f248 287 Pfam PF01531 Glycosyl transferase family 11 9 274 2.4E-20 T 23-04-2016 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 KEGG: 00601+2.4.1.69|KEGG: 00603+2.4.1.69|UniPathway: UPA00378 UPTC3659_RS07330 e1093db9ea72227cf4579903a485f248 287 PANTHER PTHR11927:SF9 7 86 1.9E-18 T 23-04-2016 UPTC3659_RS07330 e1093db9ea72227cf4579903a485f248 287 PANTHER PTHR11927:SF9 109 287 1.9E-18 T 23-04-2016 UPTC3659_RS07330 e1093db9ea72227cf4579903a485f248 287 PANTHER PTHR11927 7 86 1.9E-18 T 23-04-2016 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 KEGG: 00601+2.4.1.69|KEGG: 00603+2.4.1.69|UniPathway: UPA00378 UPTC3659_RS07330 e1093db9ea72227cf4579903a485f248 287 PANTHER PTHR11927 109 287 1.9E-18 T 23-04-2016 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 KEGG: 00601+2.4.1.69|KEGG: 00603+2.4.1.69|UniPathway: UPA00378 UPTC3659_RS06340 b61ff273b3649c22b1173405bf715255 440 Pfam PF00795 Carbon-nitrogen hydrolase 242 398 6.9E-5 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 UPTC3659_RS06340 b61ff273b3649c22b1173405bf715255 440 SUPERFAMILY SSF56317 215 409 7.72E-21 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 UPTC3659_RS06340 b61ff273b3649c22b1173405bf715255 440 PANTHER PTHR23088 198 398 3.3E-16 T 23-04-2016 UPTC3659_RS06340 b61ff273b3649c22b1173405bf715255 440 PANTHER PTHR23088:SF29 198 398 3.3E-16 T 23-04-2016 UPTC3659_RS06340 b61ff273b3649c22b1173405bf715255 440 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 24 439 12.614 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 UPTC3659_RS06340 b61ff273b3649c22b1173405bf715255 440 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 77 423 7.7E-67 T 23-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 UPTC3659_RS06340 b61ff273b3649c22b1173405bf715255 440 Gene3D G3DSA:3.60.110.10 229 410 2.7E-13 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 70 392 3.8E-107 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 SMART SM00245 185 375 7.8E-69 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 PANTHER PTHR32060 59 444 7.9E-103 T 23-04-2016 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 Gene3D G3DSA:2.30.42.10 118 194 3.3E-28 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 Gene3D G3DSA:3.90.226.10 195 377 1.6E-61 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 Gene3D G3DSA:3.90.226.10 421 440 1.6E-61 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 Pfam PF03572 Peptidase family S41 212 374 3.0E-50 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 Gene3D G3DSA:3.30.750.44 71 117 1.1E-4 T 23-04-2016 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 Pfam PF13180 PDZ domain 112 191 1.6E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 SUPERFAMILY SSF50156 109 208 6.39E-25 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 SMART SM00228 112 183 1.2E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 SUPERFAMILY SSF52096 57 130 2.15E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS04090 02f229d3c5a222ab5e42ff2c12e083a9 448 SUPERFAMILY SSF52096 205 376 2.15E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS05960 7e1bfd37c392e48a17bac3509646080f 292 SUPERFAMILY SSF103481 180 259 2.62E-5 T 23-04-2016 UPTC3659_RS05960 7e1bfd37c392e48a17bac3509646080f 292 SUPERFAMILY SSF103481 37 129 7.85E-6 T 23-04-2016 UPTC3659_RS05960 7e1bfd37c392e48a17bac3509646080f 292 Pfam PF00892 EamA-like transporter family 4 126 1.4E-6 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 UPTC3659_RS05960 7e1bfd37c392e48a17bac3509646080f 292 Pfam PF00892 EamA-like transporter family 137 273 7.3E-8 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 UPTC3659_RS06900 a12517d466b53df79b2d3873edd012be 262 Pfam PF00795 Carbon-nitrogen hydrolase 22 242 2.1E-12 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 UPTC3659_RS06900 a12517d466b53df79b2d3873edd012be 262 PANTHER PTHR23088 18 248 1.1E-14 T 23-04-2016 UPTC3659_RS06900 a12517d466b53df79b2d3873edd012be 262 Gene3D G3DSA:3.60.110.10 5 253 3.5E-41 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 UPTC3659_RS06900 a12517d466b53df79b2d3873edd012be 262 PANTHER PTHR23088:SF5 18 248 1.1E-14 T 23-04-2016 UPTC3659_RS06900 a12517d466b53df79b2d3873edd012be 262 SUPERFAMILY SSF56317 16 249 9.81E-36 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 Gene3D G3DSA:3.40.50.1370 133 287 3.1E-52 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PANTHER PTHR11405 1 299 3.6E-119 T 23-04-2016 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 3.8E-22 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 3.8E-22 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 42 61 3.8E-22 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 124 135 3.8E-22 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 301 70.127 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 113 127 2.5E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 279 290 2.5E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 40 54 2.5E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 217 227 2.5E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 73 86 2.5E-27 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 42 49 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 137 8.7E-49 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 PANTHER PTHR11405:SF1 1 299 3.6E-119 T 23-04-2016 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 145 298 4.3E-50 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 298 8.7E-109 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 Gene3D G3DSA:3.40.50.1370 1 132 1.3E-52 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS03155 39478d26886d90175be80f32876a9d46 303 SUPERFAMILY SSF53671 1 301 1.57E-94 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UPTC3659_RS06450 3c7d9152ea43fcfbdba0f8a5b383c263 360 PIRSF PIRSF000390 1 360 3.1E-98 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase UPTC3659_RS06450 3c7d9152ea43fcfbdba0f8a5b383c263 360 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 359 1.4E-113 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase UPTC3659_RS06450 3c7d9152ea43fcfbdba0f8a5b383c263 360 Gene3D G3DSA:3.40.640.10 15 244 4.0E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS06450 3c7d9152ea43fcfbdba0f8a5b383c263 360 PANTHER PTHR30244 1 357 2.1E-117 T 23-04-2016 UPTC3659_RS06450 3c7d9152ea43fcfbdba0f8a5b383c263 360 PANTHER PTHR30244:SF15 1 357 2.1E-117 T 23-04-2016 UPTC3659_RS06450 3c7d9152ea43fcfbdba0f8a5b383c263 360 SUPERFAMILY SSF53383 9 360 1.51E-110 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS06450 3c7d9152ea43fcfbdba0f8a5b383c263 360 Gene3D G3DSA:3.90.1150.10 246 359 6.1E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 SUPERFAMILY SSF53335 22 210 5.11E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 59 188 1.7E-23 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 Pfam PF12996 DUF based on E. rectale Gene description (DUF3880) 507 577 3.8E-7 T 23-04-2016 IPR024542 Domain of unknown function DUF3880 UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 Pfam PF13524 Glycosyl transferases group 1 656 735 3.2E-10 T 23-04-2016 UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 Gene3D G3DSA:3.40.50.2000 1279 1459 5.8E-13 T 23-04-2016 UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 SUPERFAMILY SSF53756 1129 1473 2.77E-45 T 23-04-2016 UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 Pfam PF00534 Glycosyl transferases group 1 1300 1460 2.2E-15 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 PANTHER PTHR12526 1244 1484 2.4E-25 T 23-04-2016 UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 PANTHER PTHR12526 1170 1222 2.4E-25 T 23-04-2016 UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 Gene3D G3DSA:3.40.50.150 41 218 1.3E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS01585 5d3b9c2059e7ef33a1c03dc86b36b920 1484 Pfam PF05050 Methyltransferase FkbM domain 61 207 5.3E-12 T 23-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- UPTC3659_RS05970 b0221ac666fcc2c1ecb5223063145ffe 341 PANTHER PTHR33529 1 329 1.1E-23 T 23-04-2016 UPTC3659_RS05970 b0221ac666fcc2c1ecb5223063145ffe 341 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 311 5.9E-37 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 UPTC3659_RS02635 728f183173f506f34fda8befd5359347 190 Pfam PF13662 Toprim domain 81 156 7.9E-5 T 23-04-2016 IPR006171 Toprim domain UPTC3659_RS02635 728f183173f506f34fda8befd5359347 190 Pfam PF02132 RecR protein 42 78 1.8E-8 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger UPTC3659_RS02635 728f183173f506f34fda8befd5359347 190 Hamap MF_00017 Recombination protein RecR [recR]. 1 189 53.294 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 UPTC3659_RS02635 728f183173f506f34fda8befd5359347 190 SUPERFAMILY SSF111304 4 189 9.94E-54 T 23-04-2016 IPR023627 Recombination protein RecR UPTC3659_RS02635 728f183173f506f34fda8befd5359347 190 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 23-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 UPTC3659_RS02635 728f183173f506f34fda8befd5359347 190 PANTHER PTHR30446:SF0 1 190 4.8E-42 T 23-04-2016 UPTC3659_RS02635 728f183173f506f34fda8befd5359347 190 PANTHER PTHR30446 1 190 4.8E-42 T 23-04-2016 UPTC3659_RS02635 728f183173f506f34fda8befd5359347 190 TIGRFAM TIGR00615 recR: recombination protein RecR 5 186 1.2E-48 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 PANTHER PTHR22642:SF7 321 502 1.9E-237 T 23-04-2016 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 SUPERFAMILY SSF51556 131 432 1.36E-188 T 23-04-2016 IPR032466 Metal-dependent hydrolase UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 SUPERFAMILY SSF51556 478 564 1.36E-188 T 23-04-2016 IPR032466 Metal-dependent hydrolase UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 Hamap MF_01953 Urease subunit alpha [ureC]. 2 565 53.965 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 4.2E-33 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 402 417 4.2E-33 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 4.2E-33 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 428 441 4.2E-33 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 564 4.6E-279 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 120 2.0E-52 T 23-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 PANTHER PTHR22642 321 502 1.9E-237 T 23-04-2016 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 Gene3D G3DSA:3.20.20.140 145 430 3.4E-200 T 23-04-2016 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 Gene3D G3DSA:3.20.20.140 486 563 3.4E-200 T 23-04-2016 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 ProSitePatterns PS00145 Urease active site. 318 334 - T 23-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 PANTHER PTHR22642 24 297 1.9E-237 T 23-04-2016 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 Pfam PF01979 Amidohydrolase family 126 456 2.3E-73 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 23-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 Gene3D G3DSA:2.30.40.10 66 144 6.2E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 SUPERFAMILY SSF51338 2 178 5.13E-63 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 UPTC3659_RS00030 867d14c1a7f48e765c72f6081d90c748 565 PANTHER PTHR22642:SF7 24 297 1.9E-237 T 23-04-2016 UPTC3659_RS07960 97d6218ecd1561bf8bc7b60c701158c1 266 PRINTS PR01387 Cytolethal distending toxin A signature 145 159 1.1E-9 T 23-04-2016 IPR015957 Cytolethal distending toxin A UPTC3659_RS07960 97d6218ecd1561bf8bc7b60c701158c1 266 PRINTS PR01387 Cytolethal distending toxin A signature 123 140 1.1E-9 T 23-04-2016 IPR015957 Cytolethal distending toxin A UPTC3659_RS07960 97d6218ecd1561bf8bc7b60c701158c1 266 PRINTS PR01387 Cytolethal distending toxin A signature 203 217 1.1E-9 T 23-04-2016 IPR015957 Cytolethal distending toxin A UPTC3659_RS07960 97d6218ecd1561bf8bc7b60c701158c1 266 PIRSF PIRSF036516 1 266 9.8E-79 T 23-04-2016 IPR015957 Cytolethal distending toxin A UPTC3659_RS07960 97d6218ecd1561bf8bc7b60c701158c1 266 SUPERFAMILY SSF50370 104 263 3.01E-50 T 23-04-2016 IPR000772 Ricin B, lectin domain UPTC3659_RS07960 97d6218ecd1561bf8bc7b60c701158c1 266 Gene3D G3DSA:2.80.10.50 98 262 5.4E-59 T 23-04-2016 UPTC3659_RS07960 97d6218ecd1561bf8bc7b60c701158c1 266 Pfam PF03498 Cytolethal distending toxin A/C domain 115 262 1.1E-40 T 23-04-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 UPTC3659_RS00510 7ed01538e958bbcfeed337a612e8b8f8 342 PANTHER PTHR22893 1 342 9.8E-127 T 23-04-2016 UPTC3659_RS00510 7ed01538e958bbcfeed337a612e8b8f8 342 PANTHER PTHR22893:SF7 1 342 9.8E-127 T 23-04-2016 UPTC3659_RS00510 7ed01538e958bbcfeed337a612e8b8f8 342 Gene3D G3DSA:3.20.20.70 2 333 1.8E-110 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS00510 7ed01538e958bbcfeed337a612e8b8f8 342 SUPERFAMILY SSF51395 1 328 8.31E-100 T 23-04-2016 UPTC3659_RS00510 7ed01538e958bbcfeed337a612e8b8f8 342 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 324 2.9E-69 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 UPTC3659_RS07625 862b473c67e1dce31a70ce18b17eadad 186 Gene3D G3DSA:2.70.40.10 3 185 2.0E-65 T 23-04-2016 IPR029054 dUTPase-like UPTC3659_RS07625 862b473c67e1dce31a70ce18b17eadad 186 PANTHER PTHR11241:SF1 1 186 1.1E-72 T 23-04-2016 UPTC3659_RS07625 862b473c67e1dce31a70ce18b17eadad 186 Pfam PF00692 dUTPase 78 176 4.7E-8 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 UPTC3659_RS07625 862b473c67e1dce31a70ce18b17eadad 186 PANTHER PTHR11241 1 186 1.1E-72 T 23-04-2016 UPTC3659_RS07625 862b473c67e1dce31a70ce18b17eadad 186 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 184 29.411 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 UPTC3659_RS07625 862b473c67e1dce31a70ce18b17eadad 186 SUPERFAMILY SSF51283 3 185 2.09E-50 T 23-04-2016 IPR029054 dUTPase-like UPTC3659_RS07625 862b473c67e1dce31a70ce18b17eadad 186 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 184 7.9E-61 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 UPTC3659_RS02600 54dbe831830919f9de380c4ea3d246ef 413 PANTHER PTHR11680 2 408 1.1E-240 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 UPTC3659_RS02600 54dbe831830919f9de380c4ea3d246ef 413 PIRSF PIRSF000412 1 410 6.8E-163 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 UPTC3659_RS02600 54dbe831830919f9de380c4ea3d246ef 413 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 215 231 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 UPTC3659_RS02600 54dbe831830919f9de380c4ea3d246ef 413 Pfam PF00464 Serine hydroxymethyltransferase 2 378 4.9E-180 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 UPTC3659_RS02600 54dbe831830919f9de380c4ea3d246ef 413 Gene3D G3DSA:3.40.640.10 31 277 1.9E-103 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS02600 54dbe831830919f9de380c4ea3d246ef 413 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 1 409 50.845 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 UPTC3659_RS02600 54dbe831830919f9de380c4ea3d246ef 413 SUPERFAMILY SSF53383 2 409 3.99E-176 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS02600 54dbe831830919f9de380c4ea3d246ef 413 Gene3D G3DSA:3.90.1150.10 278 409 8.7E-47 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 400 1.0E-130 T 23-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 PANTHER PTHR11918 3 401 7.5E-82 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 PANTHER PTHR11918:SF45 3 401 7.5E-82 T 23-04-2016 UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 404 3.5E-104 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 SUPERFAMILY SSF102114 118 356 6.15E-48 T 23-04-2016 UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 SMART SM00729 133 346 4.1E-40 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 Pfam PF00919 Uncharacterized protein family UPF0004 4 89 3.0E-17 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 137 157 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 Pfam PF04055 Radical SAM superfamily 138 299 1.6E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS04030 0ed5132c768b62237dc239a2d7c5e58b 418 Gene3D G3DSA:3.80.30.20 131 358 1.0E-59 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 SUPERFAMILY SSF51419 6 221 1.6E-33 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 Gene3D G3DSA:3.20.20.10 10 208 1.3E-36 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 PANTHER PTHR30511:SF0 1 335 2.8E-49 T 23-04-2016 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 Pfam PF01168 Alanine racemase, N-terminal domain 6 213 3.4E-33 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 Gene3D G3DSA:2.40.37.10 209 335 2.6E-23 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 PANTHER PTHR30511 1 335 2.8E-49 T 23-04-2016 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 Hamap MF_01201 Alanine racemase. 1 335 19.23 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 SUPERFAMILY SSF50621 213 335 4.53E-28 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 SMART SM01005 223 335 1.9E-24 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 PRINTS PR00992 Alanine racemase signature 142 153 6.5E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 PRINTS PR00992 Alanine racemase signature 256 271 6.5E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 PRINTS PR00992 Alanine racemase signature 25 41 6.5E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 PRINTS PR00992 Alanine racemase signature 109 121 6.5E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 PRINTS PR00992 Alanine racemase signature 239 254 6.5E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS06780 b2ebcab0070f53c454792ae01cca5c5e 335 Pfam PF00842 Alanine racemase, C-terminal domain 224 333 4.7E-18 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 UPTC3659_RS04515 3afac40e4fc75f6c7f810cff3ff31a4d 172 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 158 31.923 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 UPTC3659_RS04515 3afac40e4fc75f6c7f810cff3ff31a4d 172 PANTHER PTHR10173:SF34 6 154 9.9E-56 T 23-04-2016 UPTC3659_RS04515 3afac40e4fc75f6c7f810cff3ff31a4d 172 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 153 8.0E-50 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 UPTC3659_RS04515 3afac40e4fc75f6c7f810cff3ff31a4d 172 SUPERFAMILY SSF55068 4 164 1.7E-57 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 UPTC3659_RS04515 3afac40e4fc75f6c7f810cff3ff31a4d 172 PANTHER PTHR10173 6 154 9.9E-56 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 UPTC3659_RS04515 3afac40e4fc75f6c7f810cff3ff31a4d 172 Gene3D G3DSA:3.30.1060.10 3 153 4.6E-58 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 UPTC3659_RS04515 3afac40e4fc75f6c7f810cff3ff31a4d 172 Pfam PF01625 Peptide methionine sulfoxide reductase 5 153 4.0E-54 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 Pfam PF13393 Histidyl-tRNA synthetase 7 307 8.3E-42 T 23-04-2016 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 400 9.1E-131 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 SUPERFAMILY SSF55681 2 316 2.19E-82 T 23-04-2016 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 Pfam PF03129 Anticodon binding domain 329 407 5.6E-8 T 23-04-2016 IPR004154 Anticodon-binding UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 PIRSF PIRSF001549 1 408 2.1E-109 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 406 26.875 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 SUPERFAMILY SSF52954 323 408 1.96E-16 T 23-04-2016 IPR004154 Anticodon-binding UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 Gene3D G3DSA:3.30.930.10 216 316 3.8E-82 T 23-04-2016 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 Gene3D G3DSA:3.30.930.10 3 181 3.8E-82 T 23-04-2016 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 PANTHER PTHR11476 1 408 7.4E-151 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 PANTHER PTHR11476:SF9 1 408 7.4E-151 T 23-04-2016 UPTC3659_RS04315 61afe50895a1df540fcbad81e8135b82 408 Gene3D G3DSA:3.40.50.800 323 408 2.0E-17 T 23-04-2016 IPR004154 Anticodon-binding UPTC3659_RS03365 6749972bab2db676d61730639c828303 141 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 29 135 7.9E-18 T 23-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 UPTC3659_RS03365 6749972bab2db676d61730639c828303 141 Gene3D G3DSA:2.30.30.110 23 135 1.0E-20 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor UPTC3659_RS03365 6749972bab2db676d61730639c828303 141 SUPERFAMILY SSF50118 25 134 1.29E-18 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 PANTHER PTHR12534 1 236 7.0E-113 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 1 224 1.4E-109 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 SUPERFAMILY SSF52313 4 232 7.85E-95 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 Gene3D G3DSA:1.10.287.610 98 150 1.9E-22 T 23-04-2016 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 PRINTS PR00395 Ribosomal protein S2 signature 156 173 8.58E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 PRINTS PR00395 Ribosomal protein S2 signature 4 22 8.58E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 PRINTS PR00395 Ribosomal protein S2 signature 35 44 8.58E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 PRINTS PR00395 Ribosomal protein S2 signature 85 102 8.58E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 PRINTS PR00395 Ribosomal protein S2 signature 173 184 8.58E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 PRINTS PR00395 Ribosomal protein S2 signature 194 208 8.58E-38 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 Pfam PF00318 Ribosomal protein S2 7 222 4.6E-95 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 Gene3D G3DSA:3.40.50.10490 156 245 2.1E-68 T 23-04-2016 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 Gene3D G3DSA:3.40.50.10490 21 97 2.1E-68 T 23-04-2016 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 156 180 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 223 39.862 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS06575 6b56b4ed71c15f560bc23ae1154acf52 261 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 4 15 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 1.3E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 30 48 - T 23-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 SUPERFAMILY SSF46785 2 80 3.87E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 SMART SM00418 6 84 2.9E-16 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 PANTHER PTHR33154 13 96 3.2E-16 T 23-04-2016 UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 5.8E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 5.8E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 5.8E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 5.8E-14 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UPTC3659_RS03815 f1cbe931acef9ddd4ae2bb066e9821a3 106 Gene3D G3DSA:1.10.10.10 2 87 1.8E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS02375 c88b18e2ce2553846ebc36550d283c0f 156 PANTHER PTHR11205 1 156 8.7E-85 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 UPTC3659_RS02375 c88b18e2ce2553846ebc36550d283c0f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 UPTC3659_RS02375 c88b18e2ce2553846ebc36550d283c0f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 156 1.5E-68 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02375 c88b18e2ce2553846ebc36550d283c0f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.999 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS02375 c88b18e2ce2553846ebc36550d283c0f 156 PIRSF PIRSF002122 3 156 7.1E-58 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 UPTC3659_RS02375 c88b18e2ce2553846ebc36550d283c0f 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 1.7E-63 T 23-04-2016 IPR023798 Ribosomal protein S7 domain UPTC3659_RS02375 c88b18e2ce2553846ebc36550d283c0f 156 SUPERFAMILY SSF47973 2 152 1.14E-57 T 23-04-2016 IPR023798 Ribosomal protein S7 domain UPTC3659_RS02375 c88b18e2ce2553846ebc36550d283c0f 156 Gene3D G3DSA:1.10.455.10 6 156 3.4E-64 T 23-04-2016 IPR023798 Ribosomal protein S7 domain UPTC3659_RS06395 d82babf96ffbc77a500782fec2976191 205 Pfam PF00085 Thioredoxin 66 141 2.5E-5 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 UPTC3659_RS06395 d82babf96ffbc77a500782fec2976191 205 Gene3D G3DSA:3.40.30.10 1 203 5.9E-21 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS06395 d82babf96ffbc77a500782fec2976191 205 SUPERFAMILY SSF52833 1 167 9.46E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS04075 47d82e073ec1aa434a3eb896a44b6643 216 PIRSF PIRSF001586 1 216 1.5E-78 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS04075 47d82e073ec1aa434a3eb896a44b6643 216 SMART SM01211 1 216 1.2E-105 T 23-04-2016 UPTC3659_RS04075 47d82e073ec1aa434a3eb896a44b6643 216 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 214 4.4E-90 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS04075 47d82e073ec1aa434a3eb896a44b6643 216 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 215 38.623 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS04075 47d82e073ec1aa434a3eb896a44b6643 216 PANTHER PTHR10099 1 215 3.4E-94 T 23-04-2016 UPTC3659_RS04075 47d82e073ec1aa434a3eb896a44b6643 216 Gene3D G3DSA:3.40.50.880 1 215 3.8E-38 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS04075 47d82e073ec1aa434a3eb896a44b6643 216 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 202 2.1E-41 T 23-04-2016 UPTC3659_RS04075 47d82e073ec1aa434a3eb896a44b6643 216 SUPERFAMILY SSF52317 1 215 1.63E-69 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 308 1.8E-105 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 4.1E-29 T 23-04-2016 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 4.1E-29 T 23-04-2016 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.1E-29 T 23-04-2016 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.1E-29 T 23-04-2016 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 4.1E-29 T 23-04-2016 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 297 3.6E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 Gene3D G3DSA:3.50.50.60 2 108 1.1E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 4.3E-59 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 4.3E-59 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 4.3E-59 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 4.3E-59 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 4.3E-59 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 4.3E-59 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 289 308 4.3E-59 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 4.3E-59 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 Gene3D G3DSA:3.50.50.60 109 305 1.3E-33 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PANTHER PTHR22912 3 310 1.2E-100 T 23-04-2016 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 PANTHER PTHR22912:SF48 3 310 1.2E-100 T 23-04-2016 UPTC3659_RS08140 5a6650d14f7a1bd40c7dbe1a29f16cbd 312 SUPERFAMILY SSF51905 1 308 1.02E-45 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS04690 e4bb7adc092b184c6195f5ce5651271c 915 SUPERFAMILY SSF52540 536 824 9.57E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04690 e4bb7adc092b184c6195f5ce5651271c 915 PANTHER PTHR22683 184 915 4.0E-203 T 23-04-2016 UPTC3659_RS04690 e4bb7adc092b184c6195f5ce5651271c 915 SMART SM00843 854 915 6.1E-28 T 23-04-2016 IPR018541 FtsK gamma domain UPTC3659_RS04690 e4bb7adc092b184c6195f5ce5651271c 915 Gene3D G3DSA:3.40.50.300 536 817 9.8E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04690 e4bb7adc092b184c6195f5ce5651271c 915 Pfam PF09397 Ftsk gamma domain 856 915 1.0E-23 T 23-04-2016 IPR018541 FtsK gamma domain UPTC3659_RS04690 e4bb7adc092b184c6195f5ce5651271c 915 SUPERFAMILY SSF46785 853 915 8.16E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS04690 e4bb7adc092b184c6195f5ce5651271c 915 Pfam PF01580 FtsK/SpoIIIE family 562 699 9.9E-51 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 UPTC3659_RS04690 e4bb7adc092b184c6195f5ce5651271c 915 Pfam PF01580 FtsK/SpoIIIE family 701 752 5.2E-15 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 UPTC3659_RS04690 e4bb7adc092b184c6195f5ce5651271c 915 PANTHER PTHR22683:SF41 184 915 4.0E-203 T 23-04-2016 UPTC3659_RS08525 1f69bc3d40974bdc06b0f61fa9c73952 362 PIRSF PIRSF001456 1 360 5.6E-128 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08525 1f69bc3d40974bdc06b0f61fa9c73952 362 Pfam PF01264 Chorismate synthase 8 344 9.2E-124 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08525 1f69bc3d40974bdc06b0f61fa9c73952 362 ProSitePatterns PS00788 Chorismate synthase signature 2. 120 136 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08525 1f69bc3d40974bdc06b0f61fa9c73952 362 Hamap MF_00300 Chorismate synthase [aroC]. 8 351 34.624 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08525 1f69bc3d40974bdc06b0f61fa9c73952 362 TIGRFAM TIGR00033 aroC: chorismate synthase 8 348 2.7E-117 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08525 1f69bc3d40974bdc06b0f61fa9c73952 362 Gene3D G3DSA:3.60.150.10 8 355 6.7E-137 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08525 1f69bc3d40974bdc06b0f61fa9c73952 362 SUPERFAMILY SSF103263 1 351 3.4E-129 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08525 1f69bc3d40974bdc06b0f61fa9c73952 362 PANTHER PTHR21085 1 345 1.1E-158 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08525 1f69bc3d40974bdc06b0f61fa9c73952 362 ProSitePatterns PS00787 Chorismate synthase signature 1. 14 29 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08625 e089d68aba2fb9b5c55bb473d96a8330 505 Gene3D G3DSA:2.130.10.10 378 493 1.7E-5 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 UPTC3659_RS08625 e089d68aba2fb9b5c55bb473d96a8330 505 SUPERFAMILY SSF63829 367 489 4.84E-6 T 23-04-2016 UPTC3659_RS08625 e089d68aba2fb9b5c55bb473d96a8330 505 Pfam PF02600 Disulfide bond formation protein DsbB 14 95 9.0E-11 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 UPTC3659_RS08625 e089d68aba2fb9b5c55bb473d96a8330 505 SUPERFAMILY SSF158442 16 129 3.4E-14 T 23-04-2016 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 PANTHER PTHR10520 1 269 4.6E-110 T 23-04-2016 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 Gene3D G3DSA:3.30.70.260 1 68 3.5E-10 T 23-04-2016 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 275 2.8E-107 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 Gene3D G3DSA:3.40.50.170 79 272 7.1E-54 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 SUPERFAMILY SSF53328 82 275 1.2E-56 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 227 249 2.1E-45 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 249 274 2.1E-45 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 103 130 2.1E-45 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 2.1E-45 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 81 103 2.1E-45 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 Pfam PF00551 Formyl transferase 81 257 1.4E-44 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 PANTHER PTHR10520:SF7 1 269 4.6E-110 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 PIRSF PIRSF036480 1 275 4.7E-105 T 23-04-2016 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 275 41.186 T 23-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 UPTC3659_RS06135 1d78aa08cf528e5c7a40d2cd173f61d2 275 SUPERFAMILY SSF55021 4 65 3.5E-7 T 23-04-2016 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 Gene3D G3DSA:3.90.600.10 325 413 3.3E-24 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 SUPERFAMILY SSF56059 100 305 4.04E-54 T 23-04-2016 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 415 37.44 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 SMART SM01210 324 415 1.5E-35 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 Gene3D G3DSA:3.30.470.20 187 322 2.3E-53 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 415 1.0E-145 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 285 292 - T 23-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 SMART SM01209 99 291 1.4E-121 T 23-04-2016 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 PANTHER PTHR10520 1 416 3.3E-188 T 23-04-2016 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 325 412 9.9E-20 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 Gene3D G3DSA:3.30.1490.20 118 186 7.2E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 99 291 4.5E-78 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 SUPERFAMILY SSF51246 322 415 1.41E-24 T 23-04-2016 IPR011054 Rudiment single hybrid motif UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 Gene3D G3DSA:3.40.50.20 2 91 1.7E-23 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 98 1.7E-24 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS02675 4a092ece6c80abcf4c4d8a27075c62c9 416 SUPERFAMILY SSF52440 1 98 4.46E-25 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS07955 f7831e07e698f847d71c7e5d038d7e35 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 24 260 2.1E-11 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase UPTC3659_RS07955 f7831e07e698f847d71c7e5d038d7e35 268 Gene3D G3DSA:3.60.10.10 7 267 3.7E-110 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase UPTC3659_RS07955 f7831e07e698f847d71c7e5d038d7e35 268 SUPERFAMILY SSF56219 24 263 1.44E-28 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase UPTC3659_RS07955 f7831e07e698f847d71c7e5d038d7e35 268 PIRSF PIRSF018539 1 268 2.0E-116 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 UPTC3659_RS07955 f7831e07e698f847d71c7e5d038d7e35 268 PRINTS PR01388 Cytolethal distending toxin B signature 18 39 2.0E-44 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 UPTC3659_RS07955 f7831e07e698f847d71c7e5d038d7e35 268 PRINTS PR01388 Cytolethal distending toxin B signature 138 157 2.0E-44 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 UPTC3659_RS07955 f7831e07e698f847d71c7e5d038d7e35 268 PRINTS PR01388 Cytolethal distending toxin B signature 181 196 2.0E-44 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 UPTC3659_RS07955 f7831e07e698f847d71c7e5d038d7e35 268 PRINTS PR01388 Cytolethal distending toxin B signature 247 263 2.0E-44 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 UPTC3659_RS07955 f7831e07e698f847d71c7e5d038d7e35 268 PRINTS PR01388 Cytolethal distending toxin B signature 95 113 2.0E-44 T 23-04-2016 IPR003539 Cytolethal distending toxin B GO:0009405 UPTC3659_RS00640 84b89199823daa3fb7b646e630cba571 101 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 97 17.754 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family UPTC3659_RS00640 84b89199823daa3fb7b646e630cba571 101 PANTHER PTHR33449 10 100 4.3E-15 T 23-04-2016 UPTC3659_RS00640 84b89199823daa3fb7b646e630cba571 101 Gene3D G3DSA:3.30.1310.10 4 100 1.8E-32 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family UPTC3659_RS00640 84b89199823daa3fb7b646e630cba571 101 Pfam PF02575 YbaB/EbfC DNA-binding family 15 98 8.1E-21 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family UPTC3659_RS00640 84b89199823daa3fb7b646e630cba571 101 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 5 100 4.9E-22 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family UPTC3659_RS00640 84b89199823daa3fb7b646e630cba571 101 PIRSF PIRSF004555 3 101 3.6E-26 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family UPTC3659_RS00640 84b89199823daa3fb7b646e630cba571 101 SUPERFAMILY SSF82607 7 97 9.02E-22 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 8.2E-9 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 213 248 1.1E-7 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 SUPERFAMILY SSF51161 29 305 1.66E-72 T 23-04-2016 IPR011004 Trimeric LpxA-like UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 2 316 31.603 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 5 315 3.2E-119 T 23-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 Gene3D G3DSA:2.160.10.10 104 297 7.6E-44 T 23-04-2016 UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 18 86 1.3E-15 T 23-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 120 148 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 PANTHER PTHR22572 102 286 4.0E-52 T 23-04-2016 UPTC3659_RS04640 c67f2c5dab0070c7a89d6a5535a3d0ff 319 PANTHER PTHR22572:SF117 102 286 4.0E-52 T 23-04-2016 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 Gene3D G3DSA:3.30.930.10 102 410 1.3E-134 T 23-04-2016 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 411 37.45 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 PIRSF PIRSF001529 1 411 2.8E-163 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 Gene3D G3DSA:1.10.287.40 1 101 3.3E-11 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 PANTHER PTHR11778 1 410 5.1E-185 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 PRINTS PR00981 Seryl-tRNA synthetase signature 328 344 2.0E-29 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 PRINTS PR00981 Seryl-tRNA synthetase signature 311 324 2.0E-29 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 PRINTS PR00981 Seryl-tRNA synthetase signature 259 271 2.0E-29 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 PRINTS PR00981 Seryl-tRNA synthetase signature 346 362 2.0E-29 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 PRINTS PR00981 Seryl-tRNA synthetase signature 271 284 2.0E-29 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 SUPERFAMILY SSF46589 1 109 1.05E-18 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 104 9.4E-17 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 SUPERFAMILY SSF55681 113 410 1.16E-94 T 23-04-2016 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 217 394 4.4E-39 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS02840 a083ca13765d080a4c3a219ccabea211 411 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 410 1.8E-165 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 UPTC3659_RS07305 051da0d99870421a18e86da394f941e9 100 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.7E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 UPTC3659_RS07305 051da0d99870421a18e86da394f941e9 100 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.7E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 UPTC3659_RS07305 051da0d99870421a18e86da394f941e9 100 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.7E-13 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 UPTC3659_RS07305 051da0d99870421a18e86da394f941e9 100 SUPERFAMILY SSF47729 1 91 1.91E-28 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 UPTC3659_RS07305 051da0d99870421a18e86da394f941e9 100 PANTHER PTHR33175 1 89 1.6E-34 T 23-04-2016 UPTC3659_RS07305 051da0d99870421a18e86da394f941e9 100 Pfam PF00216 Bacterial DNA-binding protein 1 89 5.3E-31 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 UPTC3659_RS07305 051da0d99870421a18e86da394f941e9 100 SMART SM00411 1 90 7.2E-42 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 UPTC3659_RS07305 051da0d99870421a18e86da394f941e9 100 Gene3D G3DSA:4.10.520.10 1 91 1.5E-32 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 UPTC3659_RS06545 a5b397c4b030d381b965dc2d360af2ee 79 PANTHER PTHR33162 1 78 1.2E-12 T 23-04-2016 UPTC3659_RS06545 a5b397c4b030d381b965dc2d360af2ee 79 Pfam PF02416 mttA/Hcf106 family 5 51 1.1E-18 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 UPTC3659_RS06545 a5b397c4b030d381b965dc2d360af2ee 79 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 20.641 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UPTC3659_RS06545 a5b397c4b030d381b965dc2d360af2ee 79 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 1.2E-21 T 23-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 PANTHER PTHR23416 1 248 6.5E-96 T 23-04-2016 UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 Gene3D G3DSA:1.20.1180.10 195 261 3.8E-24 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 PANTHER PTHR23416:SF8 1 248 6.5E-96 T 23-04-2016 UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 41.96 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 SUPERFAMILY SSF51161 3 253 2.36E-67 T 23-04-2016 IPR011004 Trimeric LpxA-like UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 PIRSF PIRSF000456 1 263 9.0E-99 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 31 60 1.8E-5 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 140 4.5E-9 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 3 30 1.1E-4 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 Gene3D G3DSA:2.160.10.10 3 191 5.0E-44 T 23-04-2016 UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 254 9.6E-100 T 23-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 UPTC3659_RS08085 d4fb6330d3683dd32a5a7b2e38889e8e 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 254 5.3E-21 T 23-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 435 2.3E-155 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 SUPERFAMILY SSF53738 2 181 2.32E-45 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 Gene3D G3DSA:3.40.120.10 252 365 3.2E-32 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 Gene3D G3DSA:3.40.120.10 2 149 5.8E-44 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 2.6E-12 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 2.6E-12 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 2.6E-12 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 SUPERFAMILY SSF53738 156 257 6.28E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 2.7E-20 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 368 1.5E-29 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 442 40.981 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 SUPERFAMILY SSF53738 260 366 8.24E-27 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 Gene3D G3DSA:3.40.120.10 177 251 8.3E-24 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 PANTHER PTHR22573 1 436 2.0E-136 T 23-04-2016 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 PANTHER PTHR22573:SF15 1 436 2.0E-136 T 23-04-2016 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 134 1.8E-43 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 SUPERFAMILY SSF55957 358 444 8.02E-12 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08890 4353c24f27272d2ba723a6378311be3a 445 Gene3D G3DSA:3.30.310.50 366 437 3.6E-8 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UPTC3659_RS08090 2eabeef2ad52df364f7a2fe363696e45 146 SUPERFAMILY SSF54637 1 143 1.44E-47 T 23-04-2016 IPR029069 HotDog domain UPTC3659_RS08090 2eabeef2ad52df364f7a2fe363696e45 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 143 4.2E-57 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 UPTC3659_RS08090 2eabeef2ad52df364f7a2fe363696e45 146 Gene3D G3DSA:3.10.129.10 2 145 2.4E-54 T 23-04-2016 IPR029069 HotDog domain UPTC3659_RS08090 2eabeef2ad52df364f7a2fe363696e45 146 Pfam PF07977 FabA-like domain 11 138 1.2E-37 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 UPTC3659_RS08090 2eabeef2ad52df364f7a2fe363696e45 146 PANTHER PTHR30272 1 146 5.3E-66 T 23-04-2016 UPTC3659_RS08090 2eabeef2ad52df364f7a2fe363696e45 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 145 34.117 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 UPTC3659_RS03375 b88f7f5c6a4e50d95f33a5e5dede3df5 74 Pfam PF01381 Helix-turn-helix 7 43 9.4E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UPTC3659_RS03375 b88f7f5c6a4e50d95f33a5e5dede3df5 74 SUPERFAMILY SSF47413 6 52 4.88E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 UPTC3659_RS03375 b88f7f5c6a4e50d95f33a5e5dede3df5 74 Gene3D G3DSA:1.10.260.40 6 50 8.7E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 UPTC3659_RS01555 8f08921bf7e53eca39e3c7e1b64f33c6 223 SUPERFAMILY SSF52540 2 211 1.12E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01555 8f08921bf7e53eca39e3c7e1b64f33c6 223 PANTHER PTHR24220 3 219 3.0E-53 T 23-04-2016 UPTC3659_RS01555 8f08921bf7e53eca39e3c7e1b64f33c6 223 Gene3D G3DSA:3.40.50.300 2 211 1.4E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01555 8f08921bf7e53eca39e3c7e1b64f33c6 223 Pfam PF00005 ABC transporter 23 153 1.9E-14 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS01555 8f08921bf7e53eca39e3c7e1b64f33c6 223 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS01555 8f08921bf7e53eca39e3c7e1b64f33c6 223 PANTHER PTHR24220:SF117 3 219 3.0E-53 T 23-04-2016 UPTC3659_RS04230 02dea87e89e70e7612ca1c71e543c9a9 773 Pfam PF03797 Autotransporter beta-domain 524 673 3.4E-12 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS04230 02dea87e89e70e7612ca1c71e543c9a9 773 SUPERFAMILY SSF103515 489 773 7.45E-23 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS04230 02dea87e89e70e7612ca1c71e543c9a9 773 Gene3D G3DSA:2.40.128.130 504 773 4.0E-21 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS04230 02dea87e89e70e7612ca1c71e543c9a9 773 SMART SM00869 510 763 1.6E-6 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS01145 88b66916bfa52708983847c59323d892 151 SUPERFAMILY SSF75217 1 150 1.2E-39 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases UPTC3659_RS01145 88b66916bfa52708983847c59323d892 151 PANTHER PTHR33603:SF1 1 151 7.3E-32 T 23-04-2016 UPTC3659_RS01145 88b66916bfa52708983847c59323d892 151 PIRSF PIRSF004505 1 151 1.5E-44 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS01145 88b66916bfa52708983847c59323d892 151 PANTHER PTHR33603 1 151 7.3E-32 T 23-04-2016 UPTC3659_RS01145 88b66916bfa52708983847c59323d892 151 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 151 22.21 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS01145 88b66916bfa52708983847c59323d892 151 Gene3D G3DSA:3.40.1280.10 1 151 3.2E-42 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UPTC3659_RS01145 88b66916bfa52708983847c59323d892 151 Pfam PF02590 Predicted SPOUT methyltransferase 1 150 2.1E-39 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 4.1E-27 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 4.1E-27 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 4.1E-27 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 4.1E-27 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 Pfam PF00206 Lyase 11 342 9.5E-95 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 Gene3D G3DSA:1.20.200.10 140 401 1.4E-85 T 23-04-2016 UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 SUPERFAMILY SSF48557 3 462 4.24E-139 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 PANTHER PTHR11444:SF25 4 462 2.4E-230 T 23-04-2016 UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 Gene3D G3DSA:1.10.40.30 408 468 6.4E-23 T 23-04-2016 UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 Pfam PF10415 Fumarase C C-terminus 408 460 1.3E-20 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 PANTHER PTHR11444 4 462 2.4E-230 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 Gene3D G3DSA:1.10.275.10 2 139 8.3E-55 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal UPTC3659_RS00785 94333960a565487289a901ede372acf4 470 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 Pfam PF08666 SAF domain 286 341 3.6E-8 T 23-04-2016 IPR013974 SAF domain UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 11 337 3.4E-148 T 23-04-2016 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 SMART SM00858 285 343 5.1E-8 T 23-04-2016 IPR013974 SAF domain UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 SUPERFAMILY SSF51569 6 297 3.56E-84 T 23-04-2016 UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 PANTHER PTHR23416:SF62 9 295 9.7E-83 T 23-04-2016 UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 PANTHER PTHR23416 9 295 9.7E-83 T 23-04-2016 UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 Gene3D G3DSA:3.90.1210.10 286 342 4.2E-24 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 Gene3D G3DSA:3.20.20.70 7 269 1.8E-98 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 SUPERFAMILY SSF51269 282 342 9.73E-18 T 23-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal UPTC3659_RS00940 5ce484b2e6b357117f43f058832063cd 344 Pfam PF03102 NeuB family 33 270 6.8E-85 T 23-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 250 9.6E-6 T 23-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 PANTHER PTHR24220:SF358 4 102 9.1E-117 T 23-04-2016 UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 PANTHER PTHR24220:SF358 118 251 9.1E-117 T 23-04-2016 UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 Pfam PF00005 ABC transporter 19 178 3.1E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 SMART SM00382 27 237 7.6E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 Gene3D G3DSA:3.40.50.300 2 248 2.5E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 PANTHER PTHR24220 4 102 9.1E-117 T 23-04-2016 UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 PANTHER PTHR24220 118 251 9.1E-117 T 23-04-2016 UPTC3659_RS06675 20748395de7b771dad99aca611f623f6 256 SUPERFAMILY SSF52540 2 250 2.93E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 257 270 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 PANTHER PTHR11564 1 285 2.4E-96 T 23-04-2016 UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 Gene3D G3DSA:1.20.120.140 43 93 2.2E-14 T 23-04-2016 UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 Pfam PF00448 SRP54-type protein, GTPase domain 85 283 2.9E-71 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 Gene3D G3DSA:3.40.50.300 94 284 1.6E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 PANTHER PTHR11564:SF16 1 285 2.4E-96 T 23-04-2016 UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 SUPERFAMILY SSF52540 81 283 6.84E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 SMART SM00382 82 262 2.3E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 SUPERFAMILY SSF47364 1 50 6.8E-5 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 SMART SM00962 83 284 8.8E-98 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 Gene3D G3DSA:1.20.120.140 2 42 2.1E-4 T 23-04-2016 UPTC3659_RS07235 5001071ffeaf7968c37070105410d71e 288 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 31 283 4.5E-90 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 PANTHER PTHR24096:SF211 540 1156 1.5E-124 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Gene3D G3DSA:3.40.50.980 817 967 3.1E-37 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 SUPERFAMILY SSF56801 620 1163 2.35E-94 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Gene3D G3DSA:2.30.38.10 983 1061 4.1E-22 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 SUPERFAMILY SSF103473 13 412 9.55E-30 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Gene3D G3DSA:3.40.1130.10 419 595 2.1E-13 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 PANTHER PTHR24096 540 1156 1.5E-124 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 SMART SM00563 447 561 1.4E-24 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Gene3D G3DSA:3.40.50.980 684 816 1.5E-14 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Pfam PF00501 AMP-binding enzyme 684 1064 1.2E-70 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Gene3D G3DSA:1.20.1250.20 17 204 8.7E-9 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Gene3D G3DSA:1.20.1250.20 230 411 9.4E-12 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Gene3D G3DSA:3.30.300.30 1069 1164 7.4E-10 T 23-04-2016 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 ProSitePatterns PS00455 Putative AMP-binding domain signature. 809 820 - T 23-04-2016 IPR020845 AMP-binding, conserved site UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Pfam PF01553 Acyltransferase 434 558 7.7E-18 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 Pfam PF07690 Major Facilitator Superfamily 48 374 8.7E-23 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS05680 786612cad5887816cf0878789e9bb2f6 1170 SUPERFAMILY SSF69593 386 596 9.15E-27 T 23-04-2016 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 Gene3D G3DSA:3.30.1360.30 278 414 2.3E-44 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 SUPERFAMILY SSF55261 290 419 8.5E-35 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 SUPERFAMILY SSF55681 113 293 4.98E-103 T 23-04-2016 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 SUPERFAMILY SSF55681 424 580 4.98E-103 T 23-04-2016 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 3.3E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 3.3E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 3.3E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 3.3E-25 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.3E-16 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 Gene3D G3DSA:2.40.50.140 2 106 1.9E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 Pfam PF02938 GAD domain 313 405 5.8E-24 T 23-04-2016 IPR029351 GAD domain UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 PANTHER PTHR22594:SF5 2 298 1.9E-241 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 558 34.78 T 23-04-2016 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 PANTHER PTHR22594:SF5 369 566 1.9E-241 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 577 4.5E-240 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 SUPERFAMILY SSF50249 1 106 1.05E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 553 6.8E-109 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 Gene3D G3DSA:3.30.930.10 415 580 9.7E-113 T 23-04-2016 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 Gene3D G3DSA:3.30.930.10 135 277 9.7E-113 T 23-04-2016 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 PANTHER PTHR22594 369 566 1.9E-241 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03730 4f16060ee0bf193cf86981f1bbdd42b6 583 PANTHER PTHR22594 2 298 1.9E-241 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 SMART SM01086 619 707 8.7E-18 T 23-04-2016 IPR019489 Clp ATPase, C-terminal UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 SUPERFAMILY SSF52540 139 391 2.64E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 619 696 1.7E-14 T 23-04-2016 IPR019489 Clp ATPase, C-terminal UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 Pfam PF07724 AAA domain (Cdc48 subfamily) 456 613 5.9E-43 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 Gene3D G3DSA:1.10.8.60 323 403 2.0E-23 T 23-04-2016 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 SUPERFAMILY SSF81923 10 127 1.31E-11 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 SUPERFAMILY SSF52540 415 693 1.64E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 182 299 3.7E-13 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 Gene3D G3DSA:1.10.8.60 629 704 1.3E-17 T 23-04-2016 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 Gene3D G3DSA:3.40.50.300 416 628 2.2E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 SMART SM00382 456 620 7.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 SMART SM00382 177 323 4.6E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 502 520 6.7E-33 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 531 549 6.7E-33 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 460 478 6.7E-33 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 564 578 6.7E-33 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 Gene3D G3DSA:1.10.1780.10 14 133 3.9E-10 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 Gene3D G3DSA:3.40.50.300 138 321 4.6E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 PANTHER PTHR11638 2 703 4.5E-243 T 23-04-2016 UPTC3659_RS06405 fc1de03dc15cd251e73c903c93fcf214 709 PANTHER PTHR11638:SF111 2 703 4.5E-243 T 23-04-2016 UPTC3659_RS03150 c9a39a48b2bc76a5c62dc915d11a9943 387 PANTHER PTHR30474 244 386 2.6E-73 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 UPTC3659_RS03150 c9a39a48b2bc76a5c62dc915d11a9943 387 PANTHER PTHR30474:SF2 4 228 2.6E-73 T 23-04-2016 UPTC3659_RS03150 c9a39a48b2bc76a5c62dc915d11a9943 387 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 4 384 1.4E-109 T 23-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 UPTC3659_RS03150 c9a39a48b2bc76a5c62dc915d11a9943 387 Pfam PF01098 Cell cycle protein 7 385 1.4E-82 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 UPTC3659_RS03150 c9a39a48b2bc76a5c62dc915d11a9943 387 PANTHER PTHR30474 4 228 2.6E-73 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 UPTC3659_RS03150 c9a39a48b2bc76a5c62dc915d11a9943 387 PANTHER PTHR30474:SF2 244 386 2.6E-73 T 23-04-2016 UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 647 730 1.5E-10 T 23-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 Pfam PF00905 Penicillin binding protein transpeptidase domain 292 410 3.4E-9 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 33 733 3.2E-202 T 23-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 SUPERFAMILY SSF56601 201 582 8.11E-75 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 SUPERFAMILY SSF53955 35 239 1.12E-57 T 23-04-2016 IPR023346 Lysozyme-like domain UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 Gene3D G3DSA:3.40.710.10 219 579 7.5E-59 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 Gene3D G3DSA:1.10.3810.10 56 218 1.0E-52 T 23-04-2016 UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 Pfam PF00912 Transglycosylase 53 217 1.5E-49 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 PANTHER PTHR32282:SF0 34 554 7.6E-134 T 23-04-2016 UPTC3659_RS08560 cb79b959f997d9e307cdc13bad439fec 734 PANTHER PTHR32282 34 554 7.6E-134 T 23-04-2016 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 Pfam PF08345 Flagellar M-ring protein C-terminal 262 423 3.3E-39 T 23-04-2016 IPR013556 Flagellar M-ring C-terminal UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 PANTHER PTHR30046:SF0 1 555 1.8E-113 T 23-04-2016 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 PANTHER PTHR30046 1 555 1.8E-113 T 23-04-2016 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 10 553 1.9E-122 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 PRINTS PR01009 Flagellar M-ring protein signature 157 171 4.93E-30 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 PRINTS PR01009 Flagellar M-ring protein signature 270 288 4.93E-30 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 PRINTS PR01009 Flagellar M-ring protein signature 125 143 4.93E-30 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 PRINTS PR01009 Flagellar M-ring protein signature 200 218 4.93E-30 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 PRINTS PR01009 Flagellar M-ring protein signature 343 367 4.93E-30 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 PIRSF PIRSF004862 1 555 2.9E-123 T 23-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UPTC3659_RS07855 335605720b7682be6e158957a1bf3cca 561 Pfam PF01514 Secretory protein of YscJ/FliF family 29 223 6.4E-64 T 23-04-2016 IPR006182 Secretory protein YscJ/FliF UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 5 225 1.3E-64 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 82 100 2.6E-41 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 100 126 2.6E-41 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 153 181 2.6E-41 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 4 31 2.6E-41 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 PANTHER PTHR30371 8 246 1.5E-77 T 23-04-2016 UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 241 18.531 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 ProSitePatterns PS01218 TatC family signature. 153 172 - T 23-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 8 220 1.7E-66 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UPTC3659_RS03800 b04a3c53568803d64dec3971d3ef6320 246 PANTHER PTHR30371:SF0 8 246 1.5E-77 T 23-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 Pfam PF00005 ABC transporter 366 513 3.7E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 SUPERFAMILY SSF52540 344 562 1.67E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 PANTHER PTHR24221 6 53 1.7E-114 T 23-04-2016 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 PANTHER PTHR24221 71 563 1.7E-114 T 23-04-2016 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 PANTHER PTHR24221:SF138 6 53 1.7E-114 T 23-04-2016 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 PANTHER PTHR24221:SF138 71 563 1.7E-114 T 23-04-2016 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 Gene3D G3DSA:3.40.50.300 350 563 5.2E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 SUPERFAMILY SSF90123 489 498 7.72E-33 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 SUPERFAMILY SSF90123 4 317 7.72E-33 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 Gene3D G3DSA:1.20.1560.10 5 334 8.7E-25 T 23-04-2016 UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 SMART SM00382 374 558 2.9E-17 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS07385 5824a895824e44c68837796fcb562f23 564 Pfam PF00664 ABC transporter transmembrane region 18 298 9.6E-17 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 UPTC3659_RS00910 af986bf344bd8bd9334e4f01c012eaf0 618 PANTHER PTHR41786 80 612 7.6E-16 T 23-04-2016 UPTC3659_RS00910 af986bf344bd8bd9334e4f01c012eaf0 618 Pfam PF01973 Protein of unknown function DUF115 206 380 9.4E-43 T 23-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like UPTC3659_RS00910 af986bf344bd8bd9334e4f01c012eaf0 618 PANTHER PTHR41786:SF1 80 612 7.6E-16 T 23-04-2016 UPTC3659_RS08235 3f268eb33f95d155e9daa008c29f76ab 291 Gene3D G3DSA:1.10.287.890 188 266 2.7E-21 T 23-04-2016 UPTC3659_RS08235 3f268eb33f95d155e9daa008c29f76ab 291 Pfam PF01715 IPP transferase 38 266 1.2E-43 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 UPTC3659_RS08235 3f268eb33f95d155e9daa008c29f76ab 291 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 269 4.1E-64 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 UPTC3659_RS08235 3f268eb33f95d155e9daa008c29f76ab 291 SUPERFAMILY SSF52540 6 116 9.65E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08235 3f268eb33f95d155e9daa008c29f76ab 291 SUPERFAMILY SSF52540 180 197 9.65E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08235 3f268eb33f95d155e9daa008c29f76ab 291 PANTHER PTHR11088:SF25 6 286 4.4E-42 T 23-04-2016 UPTC3659_RS08235 3f268eb33f95d155e9daa008c29f76ab 291 PANTHER PTHR11088 6 286 4.4E-42 T 23-04-2016 UPTC3659_RS08235 3f268eb33f95d155e9daa008c29f76ab 291 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 286 18.942 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 UPTC3659_RS08235 3f268eb33f95d155e9daa008c29f76ab 291 Gene3D G3DSA:3.40.50.300 5 158 1.4E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08985 ee0c2952a8a218650ad6089614b9f370 1080 SUPERFAMILY SSF51126 38 273 1.57E-21 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor UPTC3659_RS08985 ee0c2952a8a218650ad6089614b9f370 1080 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 68 136 3.6E-13 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS08985 ee0c2952a8a218650ad6089614b9f370 1080 Pfam PF05860 haemagglutination activity domain 30 139 4.4E-14 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS08985 ee0c2952a8a218650ad6089614b9f370 1080 SMART SM00912 27 139 8.5E-12 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS07805 da8918f59a6b0691c676639e19f58a44 529 SUPERFAMILY SSF158442 20 131 2.75E-17 T 23-04-2016 UPTC3659_RS07805 da8918f59a6b0691c676639e19f58a44 529 Gene3D G3DSA:1.20.1550.10 21 93 4.4E-9 T 23-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain UPTC3659_RS07805 da8918f59a6b0691c676639e19f58a44 529 Pfam PF02600 Disulfide bond formation protein DsbB 19 95 9.4E-12 T 23-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 UPTC3659_RS03005 a05d03a60bfd251b81f429b234ed73fe 142 Gene3D G3DSA:2.40.50.90 9 131 1.8E-35 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold UPTC3659_RS03005 a05d03a60bfd251b81f429b234ed73fe 142 PANTHER PTHR12302 10 142 4.0E-40 T 23-04-2016 UPTC3659_RS03005 a05d03a60bfd251b81f429b234ed73fe 142 SUPERFAMILY SSF50199 7 132 5.75E-40 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold UPTC3659_RS03005 a05d03a60bfd251b81f429b234ed73fe 142 Pfam PF00565 Staphylococcal nuclease homologue 33 126 4.0E-26 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold UPTC3659_RS03005 a05d03a60bfd251b81f429b234ed73fe 142 ProSitePatterns PS01284 Thermonuclease family signature 2. 73 83 - T 23-04-2016 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 UPTC3659_RS03005 a05d03a60bfd251b81f429b234ed73fe 142 SMART SM00318 8 126 6.1E-37 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold UPTC3659_RS03005 a05d03a60bfd251b81f429b234ed73fe 142 PANTHER PTHR12302:SF0 10 142 4.0E-40 T 23-04-2016 UPTC3659_RS02865 6197debf584fbbc7650aa9ec16e12e18 453 Pfam PF00860 Permease family 19 411 1.4E-90 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS02865 6197debf584fbbc7650aa9ec16e12e18 453 PANTHER PTHR11119 2 447 2.4E-220 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS02865 6197debf584fbbc7650aa9ec16e12e18 453 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 441 1.1E-119 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 UPTC3659_RS02865 6197debf584fbbc7650aa9ec16e12e18 453 PANTHER PTHR11119:SF44 2 447 2.4E-220 T 23-04-2016 UPTC3659_RS03025 dea18d712bbef62317dd0007c95ee932 249 SUPERFAMILY SSF64518 13 221 1.1E-22 T 23-04-2016 UPTC3659_RS03025 dea18d712bbef62317dd0007c95ee932 249 Pfam PF00669 Bacterial flagellin N-terminal helical region 12 134 2.1E-16 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS03025 dea18d712bbef62317dd0007c95ee932 249 Gene3D G3DSA:1.20.1330.10 49 204 2.6E-17 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS00045 42c99b3019b9610dc7624a24d425302b 199 Hamap MF_01389 Urease accessory protein UreG [ureG]. 1 198 43.883 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 UPTC3659_RS00045 42c99b3019b9610dc7624a24d425302b 199 PIRSF PIRSF005624 1 198 1.2E-48 T 23-04-2016 UPTC3659_RS00045 42c99b3019b9610dc7624a24d425302b 199 PANTHER PTHR31715 3 198 3.9E-116 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 UPTC3659_RS00045 42c99b3019b9610dc7624a24d425302b 199 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 174 4.0E-38 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain UPTC3659_RS00045 42c99b3019b9610dc7624a24d425302b 199 SUPERFAMILY SSF52540 3 194 3.92E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00045 42c99b3019b9610dc7624a24d425302b 199 Gene3D G3DSA:3.40.50.300 3 194 3.1E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00045 42c99b3019b9610dc7624a24d425302b 199 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 1 199 3.7E-99 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 UPTC3659_RS01430 05abfe03c78f6b107d496edbaa23ee50 352 ProSitePatterns PS01347 MraY family signature 1. 62 74 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS01430 05abfe03c78f6b107d496edbaa23ee50 352 Pfam PF00953 Glycosyl transferase family 4 93 276 3.2E-35 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS01430 05abfe03c78f6b107d496edbaa23ee50 352 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 31 352 9.9E-121 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS01430 05abfe03c78f6b107d496edbaa23ee50 352 ProSitePatterns PS01348 MraY family signature 2. 181 192 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS01430 05abfe03c78f6b107d496edbaa23ee50 352 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 19 350 22.95 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS01430 05abfe03c78f6b107d496edbaa23ee50 352 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 62 74 1.5E-5 T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS01430 05abfe03c78f6b107d496edbaa23ee50 352 PANTHER PTHR22926:SF5 1 352 1.4E-124 T 23-04-2016 UPTC3659_RS01430 05abfe03c78f6b107d496edbaa23ee50 352 PANTHER PTHR22926 1 352 1.4E-124 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS06855 6fab05d75e85e79a1b2d1c7d2cd56d4c 265 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 63 262 2.0E-100 T 23-04-2016 IPR012729 Thiamine biosynthesis protein ThiF UPTC3659_RS06855 6fab05d75e85e79a1b2d1c7d2cd56d4c 265 PANTHER PTHR10953 80 182 4.8E-32 T 23-04-2016 UPTC3659_RS06855 6fab05d75e85e79a1b2d1c7d2cd56d4c 265 Pfam PF00899 ThiF family 76 262 4.2E-36 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 UPTC3659_RS06855 6fab05d75e85e79a1b2d1c7d2cd56d4c 265 Gene3D G3DSA:3.40.50.720 72 263 7.8E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS06855 6fab05d75e85e79a1b2d1c7d2cd56d4c 265 Pfam PF14453 ThiS-like ubiquitin 1 56 2.2E-18 T 23-04-2016 IPR032726 ThiS-like ubiquitin domain UPTC3659_RS06855 6fab05d75e85e79a1b2d1c7d2cd56d4c 265 SUPERFAMILY SSF69572 75 263 9.81E-47 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 SUPERFAMILY SSF53271 69 301 2.44E-66 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 308 4.8E-128 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 SMART SM01400 4 120 1.9E-81 T 23-04-2016 UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 PANTHER PTHR10210 1 308 2.8E-182 T 23-04-2016 UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 128 143 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 Pfam PF14572 Phosphoribosyl synthetase-associated domain 198 308 4.4E-26 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 5 120 1.8E-51 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 Gene3D G3DSA:3.40.50.2020 160 284 6.3E-52 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 Gene3D G3DSA:3.40.50.2020 1 159 1.1E-76 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS07485 db798c7ee0c5c1c41b4698734cd91bad 309 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 309 48.733 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 UPTC3659_RS02390 c74a8656b1791fe2780ba601683f3ab8 323 PANTHER PTHR11384:SF3 19 319 5.2E-42 T 23-04-2016 UPTC3659_RS02390 c74a8656b1791fe2780ba601683f3ab8 323 PANTHER PTHR11384 19 319 5.2E-42 T 23-04-2016 UPTC3659_RS02390 c74a8656b1791fe2780ba601683f3ab8 323 SUPERFAMILY SSF90123 18 314 7.32E-11 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 UPTC3659_RS02390 c74a8656b1791fe2780ba601683f3ab8 323 Pfam PF05992 SbmA/BacA-like family 9 318 1.9E-118 T 23-04-2016 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 UPTC3659_RS01745 05b0718eb3249efde91296e128dfe69f 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 151 163 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 UPTC3659_RS01745 05b0718eb3249efde91296e128dfe69f 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 268 18.58 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 UPTC3659_RS01745 05b0718eb3249efde91296e128dfe69f 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 262 1.4E-67 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 UPTC3659_RS01745 05b0718eb3249efde91296e128dfe69f 271 PANTHER PTHR30589:SF0 1 270 2.4E-67 T 23-04-2016 UPTC3659_RS01745 05b0718eb3249efde91296e128dfe69f 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 268 8.3E-71 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 UPTC3659_RS01745 05b0718eb3249efde91296e128dfe69f 271 PANTHER PTHR30589 1 270 2.4E-67 T 23-04-2016 UPTC3659_RS06280 f8d3a56d68d677640957462a07bf7d2c 226 SMART SM00478 39 186 5.1E-15 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 UPTC3659_RS06280 f8d3a56d68d677640957462a07bf7d2c 226 PIRSF PIRSF001435 6 215 4.1E-37 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 UPTC3659_RS06280 f8d3a56d68d677640957462a07bf7d2c 226 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 155 2.1E-14 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 UPTC3659_RS06280 f8d3a56d68d677640957462a07bf7d2c 226 Gene3D G3DSA:1.10.1670.10 125 211 3.6E-31 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal UPTC3659_RS06280 f8d3a56d68d677640957462a07bf7d2c 226 Gene3D G3DSA:1.10.340.30 29 124 7.6E-32 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 UPTC3659_RS06280 f8d3a56d68d677640957462a07bf7d2c 226 PANTHER PTHR10359:SF17 1 209 3.4E-34 T 23-04-2016 UPTC3659_RS06280 f8d3a56d68d677640957462a07bf7d2c 226 SUPERFAMILY SSF48150 16 210 1.44E-41 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 UPTC3659_RS06280 f8d3a56d68d677640957462a07bf7d2c 226 PANTHER PTHR10359 1 209 3.4E-34 T 23-04-2016 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Gene3D G3DSA:3.40.50.20 533 662 3.4E-54 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Gene3D G3DSA:3.40.50.1380 952 1085 6.1E-35 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Gene3D G3DSA:3.40.50.20 3 106 2.6E-41 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 SMART SM00851 969 1055 1.2E-27 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 202 221 7.7E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 7.7E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 376 394 7.7E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 166 178 7.7E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 7.7E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 7.7E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 237 254 7.7E-65 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 SUPERFAMILY SSF48108 392 546 9.55E-42 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 SUPERFAMILY SSF52335 952 1086 2.49E-33 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Gene3D G3DSA:1.10.1030.10 396 532 3.0E-43 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Gene3D G3DSA:3.30.1490.20 686 745 9.2E-27 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1076 12.799 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Pfam PF02142 MGS-like domain 970 1055 7.7E-18 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 1.1E-36 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 126 332 1.0E-70 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Gene3D G3DSA:3.30.1490.20 141 198 3.5E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Gene3D G3DSA:3.30.470.20 746 947 1.7E-70 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Gene3D G3DSA:3.30.470.20 199 395 9.3E-76 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1066 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 SUPERFAMILY SSF56059 673 947 1.63E-96 T 23-04-2016 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 SUPERFAMILY SSF56059 126 397 8.49E-108 T 23-04-2016 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 SUPERFAMILY SSF52440 1 125 1.58E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 SMART SM01096 415 542 5.2E-52 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 162 176 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 418 541 3.5E-37 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 PANTHER PTHR11405:SF5 1 1085 0.0 T 23-04-2016 UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 SUPERFAMILY SSF52440 557 675 7.05E-46 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS08065 16c4fdc18cbee147226a72f55765a8e3 1087 PANTHER PTHR11405 1 1085 0.0 T 23-04-2016 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 Pfam PF00579 tRNA synthetases class I (W and Y) 1 274 5.1E-62 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 Gene3D G3DSA:1.10.240.10 199 286 7.4E-30 T 23-04-2016 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 PANTHER PTHR10055:SF10 2 319 1.0E-122 T 23-04-2016 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 SUPERFAMILY SSF52374 2 318 1.15E-81 T 23-04-2016 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 Gene3D G3DSA:3.40.50.620 2 198 8.5E-78 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 PANTHER PTHR10055 2 319 1.0E-122 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 138 159 7.1E-23 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 7.1E-23 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 63 82 7.1E-23 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 189 199 7.1E-23 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 UPTC3659_RS02845 abf17d18623cd1fbe9c5e5b55c404ff6 319 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 318 1.2E-85 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 Gene3D G3DSA:2.40.180.10 2 353 6.8E-177 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 PRINTS PR00067 Catalase signature 80 98 4.1E-71 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 PRINTS PR00067 Catalase signature 285 312 4.1E-71 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 PRINTS PR00067 Catalase signature 18 41 4.1E-71 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 PRINTS PR00067 Catalase signature 317 343 4.1E-71 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 PRINTS PR00067 Catalase signature 120 138 4.1E-71 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 PRINTS PR00067 Catalase signature 101 118 4.1E-71 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 PANTHER PTHR11465 4 474 2.0E-282 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 PIRSF PIRSF038928 1 474 2.7E-218 T 23-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 SMART SM01060 5 388 8.7E-283 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 Pfam PF00199 Catalase 5 385 8.9E-186 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 Pfam PF06628 Catalase-related immune-responsive 413 472 2.1E-19 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 SUPERFAMILY SSF56634 4 473 1.44E-203 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01460 74718f665bbe73fb5c9c3da2af48f83a 474 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 330 338 - T 23-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 SUPERFAMILY SSF47917 348 464 9.16E-55 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 SUPERFAMILY SSF52540 79 350 4.22E-93 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 Gene3D G3DSA:3.40.50.300 78 347 5.5E-111 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 Gene3D G3DSA:1.10.1140.10 348 464 1.6E-58 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 2 463 5.9E-259 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 SMART SM00382 144 322 1.2E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 132 345 2.0E-65 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 PANTHER PTHR15184 1 463 0.0 T 23-04-2016 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 PANTHER PTHR15184:SF8 1 463 0.0 T 23-04-2016 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 463 55.895 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 75 3.7E-19 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 SUPERFAMILY SSF50615 2 77 6.54E-23 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS01055 74c54510a04e0e3cbd57294a5ab7a21f 465 Gene3D G3DSA:2.40.10.170 2 77 5.7E-28 T 23-04-2016 UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 SUPERFAMILY SSF50814 4 147 1.24E-29 T 23-04-2016 IPR011038 Calycin-like UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 Gene3D G3DSA:2.40.128.20 6 146 4.5E-35 T 23-04-2016 IPR012674 Calycin UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 PIRSF PIRSF036893 1 150 1.3E-39 T 23-04-2016 IPR022271 Lipocalin, ApoD type UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 Pfam PF08212 Lipocalin-like domain 8 147 5.1E-37 T 23-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 PRINTS PR01171 Bacterial lipocalin signature 139 149 4.3E-6 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 PRINTS PR01171 Bacterial lipocalin signature 113 124 4.3E-6 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 PRINTS PR01171 Bacterial lipocalin signature 8 22 4.3E-6 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 PRINTS PR01171 Bacterial lipocalin signature 25 41 4.3E-6 T 23-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 PANTHER PTHR10612 9 146 7.5E-24 T 23-04-2016 UPTC3659_RS01795 1572d227ab8b312a7884dabbc54086f1 150 ProSitePatterns PS00213 Lipocalin signature. 7 20 - T 23-04-2016 IPR022272 Lipocalin family conserved site UPTC3659_RS08755 c7789a87098798c1b37e6751ddc48991 434 PANTHER PTHR15239:SF1 161 414 2.3E-12 T 23-04-2016 UPTC3659_RS08755 c7789a87098798c1b37e6751ddc48991 434 Gene3D G3DSA:2.30.310.10 52 148 2.0E-18 T 23-04-2016 UPTC3659_RS08755 c7789a87098798c1b37e6751ddc48991 434 PANTHER PTHR15239 161 414 2.3E-12 T 23-04-2016 UPTC3659_RS08755 c7789a87098798c1b37e6751ddc48991 434 Pfam PF05670 Domain of unknown function (DUF814) 334 414 6.6E-20 T 23-04-2016 IPR008532 Domain of unknown function DUF814 UPTC3659_RS08755 c7789a87098798c1b37e6751ddc48991 434 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 63 151 6.3E-12 T 23-04-2016 UPTC3659_RS08755 c7789a87098798c1b37e6751ddc48991 434 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 165 310 2.2E-8 T 23-04-2016 UPTC3659_RS06680 0d68d1ac20c555beb39eeac3e85e58ed 231 SUPERFAMILY SSF52540 2 228 6.43E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06680 0d68d1ac20c555beb39eeac3e85e58ed 231 Pfam PF00005 ABC transporter 18 159 1.9E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS06680 0d68d1ac20c555beb39eeac3e85e58ed 231 SMART SM00382 26 210 6.9E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS06680 0d68d1ac20c555beb39eeac3e85e58ed 231 PANTHER PTHR24220:SF568 3 230 5.8E-106 T 23-04-2016 UPTC3659_RS06680 0d68d1ac20c555beb39eeac3e85e58ed 231 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS06680 0d68d1ac20c555beb39eeac3e85e58ed 231 PANTHER PTHR24220 3 230 5.8E-106 T 23-04-2016 UPTC3659_RS06680 0d68d1ac20c555beb39eeac3e85e58ed 231 Gene3D G3DSA:3.40.50.300 1 224 6.5E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 PIRSF PIRSF000722 1 394 4.4E-154 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 201 218 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 PRINTS PR00471 Acetate kinase family signature 297 310 1.3E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 PRINTS PR00471 Acetate kinase family signature 319 335 1.3E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 PRINTS PR00471 Acetate kinase family signature 171 184 1.3E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 PRINTS PR00471 Acetate kinase family signature 3 14 1.3E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 PRINTS PR00471 Acetate kinase family signature 372 384 1.3E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 PRINTS PR00471 Acetate kinase family signature 201 222 1.3E-45 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 Pfam PF00871 Acetokinase family 2 385 3.1E-151 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 Gene3D G3DSA:3.30.420.40 1 202 1.3E-13 T 23-04-2016 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 SUPERFAMILY SSF53067 155 391 5.37E-89 T 23-04-2016 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 PANTHER PTHR21060 1 393 6.1E-196 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 Gene3D G3DSA:3.30.420.40 203 389 2.6E-80 T 23-04-2016 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 PANTHER PTHR21060:SF11 1 393 6.1E-196 T 23-04-2016 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 SUPERFAMILY SSF53067 1 194 5.61E-62 T 23-04-2016 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 TIGRFAM TIGR00016 ackA: acetate kinase 1 391 5.1E-154 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS03685 1f5d58cc93973ae926ac807595ed5879 394 Hamap MF_00020 Acetate kinase [ackA]. 1 394 177.056 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 UPTC3659_RS02015 a4d366338700a5a08962459ed1ac3817 141 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 23-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02015 a4d366338700a5a08962459ed1ac3817 141 Pfam PF00572 Ribosomal protein L13 13 135 1.3E-50 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02015 a4d366338700a5a08962459ed1ac3817 141 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 14 137 26.955 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02015 a4d366338700a5a08962459ed1ac3817 141 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 137 3.2E-56 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02015 a4d366338700a5a08962459ed1ac3817 141 Gene3D G3DSA:3.90.1180.10 4 135 2.0E-55 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02015 a4d366338700a5a08962459ed1ac3817 141 PANTHER PTHR11545 2 136 9.5E-61 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02015 a4d366338700a5a08962459ed1ac3817 141 SUPERFAMILY SSF52161 2 135 1.44E-51 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02015 a4d366338700a5a08962459ed1ac3817 141 PIRSF PIRSF002181 1 140 6.5E-47 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS01120 80219cfe8b80d27b6c132c42d30cc2e4 204 Pfam PF13114 RecO N terminal 1 71 7.2E-32 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 3 436 4.9E-189 T 23-04-2016 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 SUPERFAMILY SSF143968 314 443 1.7E-37 T 23-04-2016 UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 SUPERFAMILY SSF143968 453 580 1.29E-8 T 23-04-2016 UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 Gene3D G3DSA:3.40.1670.10 459 569 5.9E-16 T 23-04-2016 UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 Gene3D G3DSA:3.40.1670.10 328 442 3.8E-27 T 23-04-2016 UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 PANTHER PTHR30108 1 441 8.9E-120 T 23-04-2016 UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5 412 2.9E-121 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 PANTHER PTHR30108:SF1 1 441 8.9E-120 T 23-04-2016 UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 SUPERFAMILY SSF50475 1 313 1.65E-96 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 UPTC3659_RS04415 021b2757bf3d54ff6542c4daf497186b 597 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 1 442 1.0E-132 T 23-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 UPTC3659_RS07400 8094ff39805207280c595f3187aa8e3f 712 Pfam PF02516 Oligosaccharyl transferase STT3 subunit 17 483 3.8E-72 T 23-04-2016 IPR003674 Oligosaccharyl transferase, STT3 subunit GO:0004576|GO:0006486|GO:0016020 UniPathway: UPA00378 UPTC3659_RS03495 1fa65c555028de0ebd7fdff51c0dca84 340 SUPERFAMILY SSF55821 4 202 2.98E-78 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain UPTC3659_RS03495 1fa65c555028de0ebd7fdff51c0dca84 340 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 197 2.9E-79 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS03495 1fa65c555028de0ebd7fdff51c0dca84 340 PANTHER PTHR21327 5 335 2.8E-101 T 23-04-2016 UPTC3659_RS03495 1fa65c555028de0ebd7fdff51c0dca84 340 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 198 2.6E-74 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS03495 1fa65c555028de0ebd7fdff51c0dca84 340 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 36.466 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS03495 1fa65c555028de0ebd7fdff51c0dca84 340 SUPERFAMILY SSF142695 220 335 1.44E-15 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 UPTC3659_RS03495 1fa65c555028de0ebd7fdff51c0dca84 340 Gene3D G3DSA:3.90.870.10 5 209 2.0E-88 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain UPTC3659_RS03495 1fa65c555028de0ebd7fdff51c0dca84 340 Pfam PF00925 GTP cyclohydrolase II 286 335 6.5E-8 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 UPTC3659_RS03495 1fa65c555028de0ebd7fdff51c0dca84 340 PANTHER PTHR21327:SF6 5 335 2.8E-101 T 23-04-2016 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 115 124 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 PANTHER PTHR11956 11 528 1.3E-148 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 SUPERFAMILY SSF47323 408 528 9.81E-23 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 Pfam PF05746 DALR anticodon binding domain 414 528 2.0E-23 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 Gene3D G3DSA:3.30.1360.70 8 92 4.5E-22 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 SUPERFAMILY SSF55190 4 83 1.7E-18 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 Gene3D G3DSA:3.40.50.620 100 420 1.4E-88 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 11 77 4.6E-16 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 Pfam PF00750 tRNA synthetases class I (R) 87 379 6.0E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 120 136 3.5E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 144 157 3.5E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 105 120 3.5E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 PRINTS PR01038 Arginyl-tRNA synthetase signature 283 304 3.5E-21 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 528 22.882 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 SMART SM00836 414 528 1.6E-25 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 SMART SM01016 3 77 1.1E-20 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 Gene3D G3DSA:1.10.730.10 421 528 5.2E-24 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 528 1.6E-131 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 PANTHER PTHR11956:SF6 11 528 1.3E-148 T 23-04-2016 UPTC3659_RS06540 64d7223e396b2434f160b367c18ed912 531 SUPERFAMILY SSF52374 101 424 4.29E-82 T 23-04-2016 UPTC3659_RS04615 ad48ce505b429aa31569f7cb467e71dc 592 Gene3D G3DSA:1.20.140.10 480 590 1.9E-4 T 23-04-2016 UPTC3659_RS04615 ad48ce505b429aa31569f7cb467e71dc 592 SUPERFAMILY SSF48695 218 425 1.07E-62 T 23-04-2016 IPR011031 Multihaem cytochrome UPTC3659_RS04615 ad48ce505b429aa31569f7cb467e71dc 592 SUPERFAMILY SSF48695 51 162 1.07E-62 T 23-04-2016 IPR011031 Multihaem cytochrome UPTC3659_RS04615 ad48ce505b429aa31569f7cb467e71dc 592 SUPERFAMILY SSF48695 459 590 1.07E-62 T 23-04-2016 IPR011031 Multihaem cytochrome UPTC3659_RS04615 ad48ce505b429aa31569f7cb467e71dc 592 Gene3D G3DSA:1.10.710.10 57 101 5.4E-28 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 UPTC3659_RS04615 ad48ce505b429aa31569f7cb467e71dc 592 Gene3D G3DSA:1.10.710.10 213 397 5.4E-28 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 UPTC3659_RS04615 ad48ce505b429aa31569f7cb467e71dc 592 Pfam PF13435 Cytochrome c554 and c-prime 64 87 9.4E-4 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 Gene3D G3DSA:3.90.10.10 147 231 2.2E-5 T 23-04-2016 UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 Gene3D G3DSA:3.40.250.10 34 140 1.5E-12 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 PANTHER PTHR35038:SF2 258 489 4.0E-24 T 23-04-2016 UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 Gene3D G3DSA:1.20.950.20 401 645 5.3E-44 T 23-04-2016 UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 SUPERFAMILY SSF52821 32 139 4.47E-14 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 Pfam PF00581 Rhodanese-like domain 41 131 9.8E-5 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 Gene3D G3DSA:1.10.780.10 232 326 6.1E-9 T 23-04-2016 UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 SMART SM00450 39 136 1.2E-4 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 PANTHER PTHR35038 258 489 4.0E-24 T 23-04-2016 UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 SUPERFAMILY SSF48695 489 544 3.14E-38 T 23-04-2016 IPR011031 Multihaem cytochrome UPTC3659_RS04620 0556f16d121947f3decbfc8a8be54501 688 SUPERFAMILY SSF48695 152 448 3.14E-38 T 23-04-2016 IPR011031 Multihaem cytochrome UPTC3659_RS00235 199b2fe18bf92a3ccac593560065fbb1 281 Gene3D G3DSA:3.40.50.300 46 185 5.7E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00235 199b2fe18bf92a3ccac593560065fbb1 281 SUPERFAMILY SSF52540 24 187 6.82E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00235 199b2fe18bf92a3ccac593560065fbb1 281 Pfam PF01926 50S ribosome-binding GTPase 32 129 1.0E-11 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS00235 199b2fe18bf92a3ccac593560065fbb1 281 Gene3D G3DSA:3.40.50.300 25 45 3.9E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00235 199b2fe18bf92a3ccac593560065fbb1 281 Gene3D G3DSA:3.40.50.300 202 274 3.9E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04555 2dffce187aca5c3419020c85ccb9b572 273 SUPERFAMILY SSF52317 38 246 7.92E-43 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS04555 2dffce187aca5c3419020c85ccb9b572 273 Gene3D G3DSA:3.40.50.880 38 264 2.7E-69 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS04555 2dffce187aca5c3419020c85ccb9b572 273 Pfam PF03575 Peptidase family S51 40 244 6.8E-62 T 23-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 UPTC3659_RS04555 2dffce187aca5c3419020c85ccb9b572 273 PANTHER PTHR20842 39 253 1.3E-71 T 23-04-2016 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 SUPERFAMILY SSF75620 10 350 1.96E-133 T 23-04-2016 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 PANTHER PTHR11075 1 353 1.2E-163 T 23-04-2016 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 SMART SM00937 63 175 1.6E-59 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 Gene3D G3DSA:3.30.160.20 207 283 2.2E-33 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 Pfam PF00472 RF-1 domain 208 317 9.2E-42 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 224 240 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 352 3.9E-161 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 PANTHER PTHR11075:SF9 1 353 1.2E-163 T 23-04-2016 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 Gene3D G3DSA:1.20.58.410 5 90 3.3E-14 T 23-04-2016 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 354 39.728 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 UPTC3659_RS00100 49f3f7d2898efcb0d80adff5d32c3245 355 Pfam PF03462 PCRF domain 11 200 1.3E-68 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 446 1.5E-72 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 Pfam PF00571 CBS domain 208 252 0.0024 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 Pfam PF00571 CBS domain 129 188 4.0E-4 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 Gene3D G3DSA:3.10.580.10 121 259 5.9E-12 T 23-04-2016 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 Gene3D G3DSA:1.25.60.10 19 120 4.5E-13 T 23-04-2016 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 SUPERFAMILY SSF161093 274 446 4.58E-49 T 23-04-2016 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 PANTHER PTHR41394 216 446 2.7E-35 T 23-04-2016 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 PANTHER PTHR41394:SF1 216 446 2.7E-35 T 23-04-2016 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 Pfam PF01769 Divalent cation transporter 318 440 1.2E-25 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 Gene3D G3DSA:1.10.357.20 275 446 3.8E-50 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 SUPERFAMILY SSF54631 127 270 1.26E-19 T 23-04-2016 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 SUPERFAMILY SSF158791 30 125 3.92E-11 T 23-04-2016 UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 Pfam PF03448 MgtE intracellular N domain 28 126 2.5E-11 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain UPTC3659_RS07285 3060c5a0e50631d45bfb017cbfe48217 447 SMART SM00924 19 128 3.7E-8 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain UPTC3659_RS01280 01d12399e696edcc4d51767badfa16b3 338 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 337 1.3E-107 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 UPTC3659_RS01280 01d12399e696edcc4d51767badfa16b3 338 Gene3D G3DSA:3.40.50.620 2 195 1.4E-67 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS01280 01d12399e696edcc4d51767badfa16b3 338 Pfam PF03054 tRNA methyl transferase 1 337 6.3E-109 T 23-04-2016 UPTC3659_RS01280 01d12399e696edcc4d51767badfa16b3 338 SUPERFAMILY SSF52402 1 231 4.63E-45 T 23-04-2016 UPTC3659_RS01280 01d12399e696edcc4d51767badfa16b3 338 Gene3D G3DSA:2.40.30.10 268 337 1.3E-18 T 23-04-2016 UPTC3659_RS01280 01d12399e696edcc4d51767badfa16b3 338 PANTHER PTHR11933:SF10 1 338 7.7E-122 T 23-04-2016 UPTC3659_RS01280 01d12399e696edcc4d51767badfa16b3 338 Gene3D G3DSA:2.30.30.280 205 260 1.6E-16 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 UPTC3659_RS01280 01d12399e696edcc4d51767badfa16b3 338 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 338 36.144 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 UPTC3659_RS01280 01d12399e696edcc4d51767badfa16b3 338 PANTHER PTHR11933 1 338 7.7E-122 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 PANTHER PTHR15680 1 118 8.1E-45 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 ProSitePatterns PS01015 Ribosomal protein L19 signature. 89 104 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 SUPERFAMILY SSF50104 2 117 1.2E-41 T 23-04-2016 IPR008991 Translation protein SH3-like domain UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 116 3.9E-47 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.8E-35 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 PRINTS PR00061 Ribosomal protein L19 signature 91 116 1.8E-35 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.8E-35 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 117 31.52 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 PIRSF PIRSF002191 1 118 4.9E-45 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06055 0d02a54a34de3c23c1a682e85695ada1 118 Pfam PF01245 Ribosomal protein L19 5 115 1.4E-44 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 227 3.4E-32 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 SUPERFAMILY SSF88659 91 166 3.79E-11 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 PANTHER PTHR30385 15 227 1.2E-37 T 23-04-2016 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 18 227 1.4E-63 T 23-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 Pfam PF04542 Sigma-70 region 2 19 87 7.4E-10 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 Pfam PF04545 Sigma-70, region 4 177 225 1.2E-16 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 Gene3D G3DSA:1.10.10.10 164 227 1.8E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 Gene3D G3DSA:1.10.10.10 92 139 1.2E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 SUPERFAMILY SSF88659 157 227 1.76E-18 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 PANTHER PTHR30385:SF7 15 227 1.2E-37 T 23-04-2016 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 SUPERFAMILY SSF88946 14 89 2.55E-15 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 PRINTS PR00046 Major sigma-70 factor signature 197 212 9.2E-6 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 PRINTS PR00046 Major sigma-70 factor signature 212 223 9.2E-6 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 PRINTS PR00046 Major sigma-70 factor signature 180 192 9.2E-6 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01260 bd7dfd0ce06c1ee0b407af8d84b3e29b 228 PRINTS PR00046 Major sigma-70 factor signature 89 102 9.2E-6 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01335 e403def385a3448ddb602aafd8f04ade 149 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 49 65 8.0E-11 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 UPTC3659_RS01335 e403def385a3448ddb602aafd8f04ade 149 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 121 139 8.0E-11 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 UPTC3659_RS01335 e403def385a3448ddb602aafd8f04ade 149 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 25 41 8.0E-11 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 UPTC3659_RS01335 e403def385a3448ddb602aafd8f04ade 149 Pfam PF00210 Ferritin-like domain 5 146 4.5E-28 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 UPTC3659_RS01335 e403def385a3448ddb602aafd8f04ade 149 Gene3D G3DSA:1.20.1260.10 3 145 1.5E-43 T 23-04-2016 IPR012347 Ferritin-related UPTC3659_RS01335 e403def385a3448ddb602aafd8f04ade 149 PIRSF PIRSF005900 1 149 5.5E-45 T 23-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 UPTC3659_RS01335 e403def385a3448ddb602aafd8f04ade 149 PANTHER PTHR30295 3 145 7.8E-31 T 23-04-2016 UPTC3659_RS01335 e403def385a3448ddb602aafd8f04ade 149 PANTHER PTHR30295:SF6 3 145 7.8E-31 T 23-04-2016 UPTC3659_RS01335 e403def385a3448ddb602aafd8f04ade 149 SUPERFAMILY SSF47240 3 143 2.07E-38 T 23-04-2016 IPR009078 Ferritin-like superfamily UPTC3659_RS04140 f4dd544eedf0c7e8a9470bc323142142 159 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 6 119 7.9E-24 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 UPTC3659_RS04140 f4dd544eedf0c7e8a9470bc323142142 159 Gene3D G3DSA:3.40.50.300 5 157 7.2E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04140 f4dd544eedf0c7e8a9470bc323142142 159 PANTHER PTHR40072 5 108 7.7E-14 T 23-04-2016 UPTC3659_RS04140 f4dd544eedf0c7e8a9470bc323142142 159 PANTHER PTHR40072:SF2 5 108 7.7E-14 T 23-04-2016 UPTC3659_RS04140 f4dd544eedf0c7e8a9470bc323142142 159 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 154 5.9E-42 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 UPTC3659_RS04140 f4dd544eedf0c7e8a9470bc323142142 159 SUPERFAMILY SSF52540 7 153 1.28E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 Gene3D G3DSA:3.40.50.720 208 377 1.7E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 SUPERFAMILY SSF53223 4 195 2.49E-65 T 23-04-2016 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 Gene3D G3DSA:1.10.285.10 378 452 4.1E-26 T 23-04-2016 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 Gene3D G3DSA:1.10.285.10 4 65 1.3E-15 T 23-04-2016 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 SMART SM00839 203 451 1.2E-82 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 PANTHER PTHR11606:SF4 1 453 2.5E-219 T 23-04-2016 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 PANTHER PTHR11606 1 453 2.5E-219 T 23-04-2016 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 451 6.2E-84 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 PIRSF PIRSF000185 22 453 1.5E-111 T 23-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 Gene3D G3DSA:3.40.192.10 66 186 1.3E-55 T 23-04-2016 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 121 134 - T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 56 184 6.0E-46 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 113 127 3.6E-27 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 3.6E-27 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 377 388 3.6E-27 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 3.6E-27 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 UPTC3659_RS07590 642d908dda02aa744c870f24a18b6bbc 453 SUPERFAMILY SSF51735 201 452 3.5E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 SUPERFAMILY SSF53774 2 319 1.31E-71 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 PANTHER PTHR11707 2 313 1.1E-31 T 23-04-2016 UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 PIRSF PIRSF001220 1 322 1.0E-72 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 Pfam PF00710 Asparaginase, N-terminal 2 186 3.4E-44 T 23-04-2016 IPR027474 L-asparaginase, N-terminal UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 PIRSF PIRSF500176 1 322 5.9E-72 T 23-04-2016 UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 PANTHER PTHR11707:SF29 2 313 1.1E-31 T 23-04-2016 UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 PRINTS PR00139 Asparaginase/glutaminase family signature 3 14 6.9E-10 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 6.9E-10 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 PRINTS PR00139 Asparaginase/glutaminase family signature 248 266 6.9E-10 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 Gene3D G3DSA:3.40.50.1170 2 193 8.6E-46 T 23-04-2016 IPR027474 L-asparaginase, N-terminal UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 Gene3D G3DSA:3.40.50.40 204 318 2.3E-15 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain UPTC3659_RS02465 7dc3b22819bf7170b02d87d2c334a714 324 SMART SM00870 2 314 6.4E-85 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 UPTC3659_RS06930 da8100dd79cfae9139650dd2bd23a888 510 PANTHER PTHR34597:SF1 48 510 1.5E-28 T 23-04-2016 UPTC3659_RS06930 da8100dd79cfae9139650dd2bd23a888 510 PANTHER PTHR34597 48 510 1.5E-28 T 23-04-2016 UPTC3659_RS06930 da8100dd79cfae9139650dd2bd23a888 510 Gene3D G3DSA:2.40.160.50 144 510 1.9E-31 T 23-04-2016 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 Pfam PF01197 Ribosomal protein L31 1 64 3.3E-32 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 PANTHER PTHR33280:SF2 1 66 1.3E-34 T 23-04-2016 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 1.0E-31 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 PANTHER PTHR33280 1 66 1.3E-34 T 23-04-2016 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 SUPERFAMILY SSF143800 1 65 5.89E-26 T 23-04-2016 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 3.4E-22 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 3.4E-22 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.4E-22 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 29.217 T 23-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS08185 ba6b730884278a638522da3c9b4b96eb 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS03170 5ec7ceac9abc4198b3539f154a246e00 421 PANTHER PTHR11601 13 414 6.7E-108 T 23-04-2016 UPTC3659_RS03170 5ec7ceac9abc4198b3539f154a246e00 421 Pfam PF00266 Aminotransferase class-V 18 408 4.6E-41 T 23-04-2016 IPR000192 Aminotransferase class V domain UPTC3659_RS03170 5ec7ceac9abc4198b3539f154a246e00 421 PANTHER PTHR11601:SF24 13 414 6.7E-108 T 23-04-2016 UPTC3659_RS03170 5ec7ceac9abc4198b3539f154a246e00 421 Gene3D G3DSA:3.40.640.10 30 284 4.2E-44 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS03170 5ec7ceac9abc4198b3539f154a246e00 421 Gene3D G3DSA:3.90.1150.10 285 420 5.4E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS03170 5ec7ceac9abc4198b3539f154a246e00 421 SUPERFAMILY SSF53383 2 418 9.77E-63 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 PIRSF PIRSF000098 1 417 1.4E-157 T 23-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 Pfam PF00742 Homoserine dehydrogenase 127 305 5.7E-64 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 SUPERFAMILY SSF55021 335 407 2.1E-11 T 23-04-2016 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 PANTHER PTHR21499:SF2 1 357 1.1E-116 T 23-04-2016 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 SUPERFAMILY SSF51735 1 148 3.45E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 Pfam PF01842 ACT domain 337 403 4.3E-11 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 PANTHER PTHR21499 1 357 1.1E-116 T 23-04-2016 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 SUPERFAMILY SSF55347 127 292 3.6E-54 T 23-04-2016 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 114 1.1E-12 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 Gene3D G3DSA:3.40.50.720 1 138 7.0E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 Gene3D G3DSA:3.30.70.260 336 408 1.1E-8 T 23-04-2016 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 Gene3D G3DSA:3.30.360.10 139 289 2.5E-57 T 23-04-2016 UPTC3659_RS08155 0d1b75ce2b316a0d1d446866766b73a6 417 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 173 195 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 SUPERFAMILY SSF53697 7 284 1.62E-61 T 23-04-2016 UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 Pfam PF01380 SIS domain 42 170 4.5E-29 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 PANTHER PTHR38418 30 313 3.0E-40 T 23-04-2016 UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 SMART SM00116 273 318 4.0 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 SMART SM00116 208 255 5.4E-4 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 PIRSF PIRSF004692 1 318 1.2E-128 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 Gene3D G3DSA:3.40.50.10490 8 193 3.5E-51 T 23-04-2016 UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 Gene3D G3DSA:3.10.580.10 194 312 9.4E-31 T 23-04-2016 UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 44 310 6.0E-106 T 23-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 Pfam PF00571 CBS domain 200 254 6.7E-7 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS01570 0b6fb2f457adecc7bdd94cb678e04bcd 318 Pfam PF00571 CBS domain 266 310 5.3E-5 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS05705 e9b66c42cd96abae5497466b45e16930 123 Pfam PF03692 Putative zinc- or iron-chelating domain 15 116 3.0E-13 T 23-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein UPTC3659_RS05705 e9b66c42cd96abae5497466b45e16930 123 PANTHER PTHR35866 13 104 6.5E-13 T 23-04-2016 UPTC3659_RS05705 e9b66c42cd96abae5497466b45e16930 123 PANTHER PTHR35866:SF1 13 104 6.5E-13 T 23-04-2016 UPTC3659_RS08875 31e6442a4a89e8bb66645caf71791350 445 PANTHER PTHR13932 38 414 1.4E-81 T 23-04-2016 UPTC3659_RS08875 31e6442a4a89e8bb66645caf71791350 445 Gene3D G3DSA:3.80.30.20 42 233 2.9E-30 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe UPTC3659_RS08875 31e6442a4a89e8bb66645caf71791350 445 SMART SM00729 42 254 8.0E-31 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS08875 31e6442a4a89e8bb66645caf71791350 445 SUPERFAMILY SSF102114 41 404 6.41E-64 T 23-04-2016 UPTC3659_RS08875 31e6442a4a89e8bb66645caf71791350 445 Pfam PF04055 Radical SAM superfamily 48 210 7.1E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS08875 31e6442a4a89e8bb66645caf71791350 445 PANTHER PTHR13932:SF5 38 414 1.4E-81 T 23-04-2016 UPTC3659_RS01935 3234bf5d0bf3b4234f804b257167f6aa 139 Pfam PF02050 Flagellar FliJ protein 17 133 9.5E-11 T 23-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 Gene3D G3DSA:1.25.40.20 233 396 1.8E-20 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 SUPERFAMILY SSF48403 236 400 5.44E-22 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 PANTHER PTHR24188 344 384 5.5E-16 T 23-04-2016 UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 PANTHER PTHR24188 242 317 5.5E-16 T 23-04-2016 UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 PANTHER PTHR24188 133 139 5.5E-16 T 23-04-2016 UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 SMART SM00248 253 280 4000.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 SMART SM00248 343 375 320.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 SMART SM00248 284 313 6.1E-7 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 SMART SM00248 222 252 2000.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05950 c9cd38e2bbc8002d84b370ff90acefbf 413 Pfam PF12796 Ankyrin repeats (3 copies) 232 314 9.7E-12 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 672 689 - T 23-04-2016 IPR010917 TonB-dependent receptor, conserved site UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 PANTHER PTHR32552:SF15 242 689 1.4E-63 T 23-04-2016 UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 PANTHER PTHR32552:SF15 1 221 1.4E-63 T 23-04-2016 UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 PANTHER PTHR32552 242 689 1.4E-63 T 23-04-2016 UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 PANTHER PTHR32552 1 221 1.4E-63 T 23-04-2016 UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 Pfam PF00593 TonB dependent receptor 414 688 5.1E-31 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 SUPERFAMILY SSF56935 33 689 1.37E-107 T 23-04-2016 UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 Gene3D G3DSA:2.40.170.20 158 689 4.1E-78 T 23-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 Gene3D G3DSA:2.170.130.10 23 157 1.8E-41 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 UPTC3659_RS04270 afffec6d98b4f2196e288a37d9114bc8 689 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 154 3.5E-27 T 23-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 UPTC3659_RS03665 eac0fcb5ab7f3f331f23280a3617c27f 247 Gene3D G3DSA:3.40.50.1820 13 242 7.7E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS03665 eac0fcb5ab7f3f331f23280a3617c27f 247 SUPERFAMILY SSF53474 13 241 4.19E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS03665 eac0fcb5ab7f3f331f23280a3617c27f 247 PANTHER PTHR10992 13 246 1.6E-20 T 23-04-2016 UPTC3659_RS03665 eac0fcb5ab7f3f331f23280a3617c27f 247 Pfam PF12697 Alpha/beta hydrolase family 28 234 2.9E-11 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 365 5.3E-148 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 Gene3D G3DSA:3.10.20.30 262 365 6.3E-48 T 23-04-2016 IPR012675 Beta-grasp domain UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 6.1E-40 T 23-04-2016 IPR013029 Domain of unknown function DUF933 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 42.062 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 SUPERFAMILY SSF81271 282 363 6.98E-36 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 PANTHER PTHR23305:SF12 1 366 3.0E-179 T 23-04-2016 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 Pfam PF01926 50S ribosome-binding GTPase 5 116 5.3E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 PIRSF PIRSF006641 1 366 3.1E-157 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 SUPERFAMILY SSF52540 3 304 5.0E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 PANTHER PTHR23305 1 366 3.0E-179 T 23-04-2016 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 Gene3D G3DSA:3.40.50.300 203 261 5.9E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 Gene3D G3DSA:3.40.50.300 4 131 5.9E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 Gene3D G3DSA:1.10.150.300 132 202 7.9E-22 T 23-04-2016 IPR023192 TGS-like domain UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.38E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 1.38E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 1.38E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS03910 9019a6815e5c97f99adf6d0f6315b225 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 1.38E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS08420 812e02bc4128140d97acbbb255bc08ae 190 Pfam PF00551 Formyl transferase 4 183 3.0E-47 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS08420 812e02bc4128140d97acbbb255bc08ae 190 SUPERFAMILY SSF53328 4 189 1.05E-48 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS08420 812e02bc4128140d97acbbb255bc08ae 190 PANTHER PTHR10520 4 183 2.3E-56 T 23-04-2016 UPTC3659_RS08420 812e02bc4128140d97acbbb255bc08ae 190 Gene3D G3DSA:3.40.50.170 4 188 1.1E-61 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UPTC3659_RS08420 812e02bc4128140d97acbbb255bc08ae 190 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 189 25.965 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 UPTC3659_RS08420 812e02bc4128140d97acbbb255bc08ae 190 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 188 8.9E-53 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 1.7E-54 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 PIRSF PIRSF000149 1 331 2.8E-132 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 PANTHER PTHR10836 1 330 2.6E-170 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 Gene3D G3DSA:3.40.50.720 1 158 4.0E-67 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 227 244 2.9E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 2.9E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.9E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.9E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.9E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 PANTHER PTHR10836:SF50 1 330 2.6E-170 T 23-04-2016 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 Gene3D G3DSA:3.30.360.10 159 313 2.7E-70 T 23-04-2016 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 1.5E-127 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 SUPERFAMILY SSF55347 150 312 5.95E-64 T 23-04-2016 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 SUPERFAMILY SSF51735 3 166 2.14E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 311 4.0E-61 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS02180 44f195521f2e7381e1df2a1ae11cab9f 331 SMART SM00846 3 150 4.2E-77 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 SUPERFAMILY SSF47446 292 425 8.76E-42 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 263 276 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 PANTHER PTHR11564 1 431 2.9E-158 T 23-04-2016 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 Gene3D G3DSA:1.20.120.140 2 79 1.6E-7 T 23-04-2016 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 PANTHER PTHR11564:SF7 1 431 2.9E-158 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 Pfam PF00448 SRP54-type protein, GTPase domain 95 289 6.5E-70 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 SMART SM00382 94 290 8.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 Gene3D G3DSA:1.10.260.30 322 425 6.0E-34 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 SMART SM00963 1 79 1.9E-7 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 SUPERFAMILY SSF52540 89 292 2.29E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 Gene3D G3DSA:3.40.50.300 90 290 1.3E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 Pfam PF02881 SRP54-type protein, helical bundle domain 6 66 1.3E-7 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 SMART SM00962 95 290 4.3E-98 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 Pfam PF02978 Signal peptide binding domain 321 420 4.2E-29 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 SUPERFAMILY SSF47364 2 82 6.8E-11 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 UPTC3659_RS06080 617b8870b7b29e51debcfa8c7c168093 445 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 424 7.1E-147 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 331 345 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 Gene3D G3DSA:3.40.50.300 242 501 8.7E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 PANTHER PTHR30258:SF2 16 502 5.3E-135 T 23-04-2016 UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 15 103 4.1E-10 T 23-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 SUPERFAMILY SSF160246 15 103 7.85E-6 T 23-04-2016 UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 Gene3D G3DSA:3.30.450.90 116 237 1.8E-35 T 23-04-2016 UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 SUPERFAMILY SSF52540 119 500 4.94E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 SMART SM00382 265 387 3.5E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 Pfam PF00437 Type II/IV secretion system protein 147 403 8.5E-72 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 UPTC3659_RS02055 17e4a9229bdb80e7fa9dd6867f083185 504 PANTHER PTHR30258 16 502 5.3E-135 T 23-04-2016 UPTC3659_RS04645 9e68708ae6a75aff207d2e133cc06f79 155 SUPERFAMILY SSF55021 76 152 2.75E-15 T 23-04-2016 UPTC3659_RS04645 9e68708ae6a75aff207d2e133cc06f79 155 Gene3D G3DSA:3.30.70.1150 82 153 3.7E-12 T 23-04-2016 UPTC3659_RS04645 9e68708ae6a75aff207d2e133cc06f79 155 Gene3D G3DSA:3.30.70.260 1 77 2.5E-31 T 23-04-2016 UPTC3659_RS04645 9e68708ae6a75aff207d2e133cc06f79 155 SUPERFAMILY SSF55021 3 76 3.31E-20 T 23-04-2016 UPTC3659_RS04645 9e68708ae6a75aff207d2e133cc06f79 155 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 6 76 1.0E-34 T 23-04-2016 UPTC3659_RS04645 9e68708ae6a75aff207d2e133cc06f79 155 Pfam PF10369 Small subunit of acetolactate synthase 83 153 7.9E-12 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS04645 9e68708ae6a75aff207d2e133cc06f79 155 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 2 152 2.5E-38 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS04645 9e68708ae6a75aff207d2e133cc06f79 155 Pfam PF01842 ACT domain 5 69 9.1E-14 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 UPTC3659_RS04645 9e68708ae6a75aff207d2e133cc06f79 155 PANTHER PTHR30239 1 152 4.6E-41 T 23-04-2016 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 Pfam PF00203 Ribosomal protein S19 3 83 6.7E-36 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 SUPERFAMILY SSF54570 3 84 7.85E-35 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 89 1.8E-43 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 PIRSF PIRSF002144 1 93 4.1E-31 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 Gene3D G3DSA:3.30.860.10 1 89 6.2E-39 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.269 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.1E-22 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.1E-22 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.1E-22 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00405 a5834279908a4c60e99ca61e50fc57b1 93 PANTHER PTHR11880 1 83 3.0E-45 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 Pfam PF02779 Transketolase, pyrimidine binding domain 336 500 2.4E-38 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 ProSitePatterns PS00802 Transketolase signature 2. 445 461 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 PANTHER PTHR11624:SF1 1 303 7.0E-279 T 23-04-2016 UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 PANTHER PTHR11624:SF1 324 630 7.0E-279 T 23-04-2016 UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 SUPERFAMILY SSF52922 510 632 2.88E-29 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 ProSitePatterns PS00801 Transketolase signature 1. 10 30 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 SUPERFAMILY SSF52518 2 307 5.09E-105 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 SUPERFAMILY SSF52518 332 502 4.26E-56 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 Gene3D G3DSA:3.40.50.970 325 506 1.2E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 628 8.2E-235 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 PANTHER PTHR11624 1 303 7.0E-279 T 23-04-2016 IPR033247 Transketolase family UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 PANTHER PTHR11624 324 630 7.0E-279 T 23-04-2016 IPR033247 Transketolase family UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 SMART SM00861 336 502 6.3E-57 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 Gene3D G3DSA:3.40.50.970 2 307 6.9E-116 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 Pfam PF02780 Transketolase, C-terminal domain 521 563 2.1E-6 T 23-04-2016 IPR033248 Transketolase, C-terminal domain UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 Gene3D G3DSA:3.40.50.920 514 625 6.3E-33 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 UPTC3659_RS00655 dea34524c5dd141b0ea8f66ad9065d60 634 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 317 6.3E-120 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 UPTC3659_RS02330 295e7340e06b0f5bd23f20cde520a103 60 Gene3D G3DSA:1.20.5.1030 1 59 9.8E-18 T 23-04-2016 UPTC3659_RS02330 295e7340e06b0f5bd23f20cde520a103 60 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 59 12.025 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE UPTC3659_RS02330 295e7340e06b0f5bd23f20cde520a103 60 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 57 1.1E-13 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 UPTC3659_RS02330 295e7340e06b0f5bd23f20cde520a103 60 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 59 3.0E-15 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 SUPERFAMILY SSF46929 139 182 3.66E-6 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 PANTHER PTHR33796 2 183 1.9E-41 T 23-04-2016 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 SUPERFAMILY SSF50249 1 63 3.71E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 Gene3D G3DSA:1.10.150.20 68 131 4.0E-22 T 23-04-2016 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 SUPERFAMILY SSF47781 66 136 1.18E-18 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 SMART SM00278 108 127 0.32 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 SMART SM00278 73 92 79.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 Pfam PF14520 Helix-hairpin-helix domain 72 130 3.0E-15 T 23-04-2016 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 Gene3D G3DSA:2.40.50.140 1 65 1.1E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 182 2.2E-41 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 Pfam PF07499 RuvA, C-terminal domain 142 182 5.8E-9 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 Pfam PF01330 RuvA N terminal domain 1 62 1.6E-12 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 Gene3D G3DSA:1.10.8.10 139 183 3.3E-9 T 23-04-2016 UPTC3659_RS03650 466c3828008abe5849bf949ec679be2f 183 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 183 26.149 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 UPTC3659_RS06635 386bfd9e8a3b9934a619fd8642c9c527 187 Gene3D G3DSA:1.20.120.50 2 126 4.9E-32 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS06635 386bfd9e8a3b9934a619fd8642c9c527 187 Pfam PF01814 Hemerythrin HHE cation binding domain 15 123 1.4E-8 T 23-04-2016 IPR012312 Haemerythrin-like UPTC3659_RS06635 386bfd9e8a3b9934a619fd8642c9c527 187 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 23-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 UPTC3659_RS06635 386bfd9e8a3b9934a619fd8642c9c527 187 PANTHER PTHR37164 1 142 3.5E-18 T 23-04-2016 UPTC3659_RS06635 386bfd9e8a3b9934a619fd8642c9c527 187 SUPERFAMILY SSF47188 3 126 4.71E-29 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS06635 386bfd9e8a3b9934a619fd8642c9c527 187 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 126 1.2E-29 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS02585 c3e044c6b7a32ad250a8706e83888a49 189 Pfam PF02674 Colicin V production protein 7 152 2.2E-27 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 Gene3D G3DSA:3.40.630.10 151 479 3.9E-117 T 23-04-2016 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 SUPERFAMILY SSF53187 159 476 5.02E-104 T 23-04-2016 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 324 331 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 SUPERFAMILY SSF52949 59 134 1.71E-8 T 23-04-2016 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 Gene3D G3DSA:3.40.220.10 59 144 3.9E-13 T 23-04-2016 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 163 470 1.3E-101 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 480 30.468 T 23-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 PANTHER PTHR11963 65 476 1.9E-145 T 23-04-2016 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 PRINTS PR00481 Cytosol aminopeptidase signature 239 256 2.2E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 PRINTS PR00481 Cytosol aminopeptidase signature 298 319 2.2E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 PRINTS PR00481 Cytosol aminopeptidase signature 261 282 2.2E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 PRINTS PR00481 Cytosol aminopeptidase signature 348 363 2.2E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 PRINTS PR00481 Cytosol aminopeptidase signature 320 340 2.2E-44 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UPTC3659_RS03915 5df97b84263c01d7b4266031e17563e6 483 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 62 122 1.6E-4 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 UPTC3659_RS04130 580e0807844b6976ac53e77b56596ece 95 PANTHER PTHR33219 7 91 9.8E-19 T 23-04-2016 UPTC3659_RS04130 580e0807844b6976ac53e77b56596ece 95 PANTHER PTHR33219:SF5 7 91 9.8E-19 T 23-04-2016 UPTC3659_RS04130 580e0807844b6976ac53e77b56596ece 95 Pfam PF02325 YGGT family 17 87 3.3E-20 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 UPTC3659_RS04330 b2dec57859de5e976cd445890735fb7f 343 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 2 341 26.402 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS04330 b2dec57859de5e976cd445890735fb7f 343 Gene3D G3DSA:3.40.50.2000 2 179 1.6E-40 T 23-04-2016 UPTC3659_RS04330 b2dec57859de5e976cd445890735fb7f 343 PANTHER PTHR21015 1 301 8.8E-55 T 23-04-2016 UPTC3659_RS04330 b2dec57859de5e976cd445890735fb7f 343 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 2 140 8.8E-24 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS04330 b2dec57859de5e976cd445890735fb7f 343 PANTHER PTHR21015:SF22 1 301 8.8E-55 T 23-04-2016 UPTC3659_RS04330 b2dec57859de5e976cd445890735fb7f 343 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 330 5.0E-75 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS04330 b2dec57859de5e976cd445890735fb7f 343 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 177 325 2.6E-33 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 UPTC3659_RS04330 b2dec57859de5e976cd445890735fb7f 343 SUPERFAMILY SSF53756 2 334 1.01E-80 T 23-04-2016 UPTC3659_RS04330 b2dec57859de5e976cd445890735fb7f 343 Gene3D G3DSA:3.40.50.2000 180 323 6.3E-28 T 23-04-2016 UPTC3659_RS02185 aeceba580717246f628564470220a05e 181 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 54 3.5E-9 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UPTC3659_RS02185 aeceba580717246f628564470220a05e 181 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 174 3.6E-42 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 UPTC3659_RS02185 aeceba580717246f628564470220a05e 181 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 178 22.802 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 UPTC3659_RS02185 aeceba580717246f628564470220a05e 181 Gene3D G3DSA:3.40.50.620 1 171 6.4E-48 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS02185 aeceba580717246f628564470220a05e 181 SUPERFAMILY SSF52374 1 162 5.0E-37 T 23-04-2016 UPTC3659_RS02185 aeceba580717246f628564470220a05e 181 PANTHER PTHR21342:SF2 1 133 5.9E-25 T 23-04-2016 UPTC3659_RS02185 aeceba580717246f628564470220a05e 181 Pfam PF01467 Cytidylyltransferase-like 5 156 3.9E-22 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UPTC3659_RS02185 aeceba580717246f628564470220a05e 181 PANTHER PTHR21342 1 133 5.9E-25 T 23-04-2016 UPTC3659_RS03935 326bdd0cdad3b63a9892c66b0ea86aee 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 6 142 4.8E-54 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 UPTC3659_RS03935 326bdd0cdad3b63a9892c66b0ea86aee 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 5 142 6.7E-51 T 23-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 UPTC3659_RS03935 326bdd0cdad3b63a9892c66b0ea86aee 145 PIRSF PIRSF005384 4 145 3.5E-54 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 UPTC3659_RS03935 326bdd0cdad3b63a9892c66b0ea86aee 145 SUPERFAMILY SSF89623 4 142 7.32E-52 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 UPTC3659_RS03935 326bdd0cdad3b63a9892c66b0ea86aee 145 Gene3D G3DSA:3.40.1400.10 3 142 4.1E-58 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 UPTC3659_RS03935 326bdd0cdad3b63a9892c66b0ea86aee 145 Pfam PF02502 Ribose/Galactose Isomerase 6 141 2.7E-52 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 UPTC3659_RS03935 326bdd0cdad3b63a9892c66b0ea86aee 145 PANTHER PTHR30345 1 142 4.0E-59 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 Gene3D G3DSA:1.20.58.410 1 114 7.9E-24 T 23-04-2016 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 37.08 T 23-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 Pfam PF00472 RF-1 domain 228 335 2.1E-41 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 Gene3D G3DSA:3.30.160.20 227 305 7.7E-38 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 362 1.0E-155 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 Pfam PF03462 PCRF domain 29 219 4.7E-57 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 SUPERFAMILY SSF75620 29 363 7.98E-126 T 23-04-2016 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 PANTHER PTHR11075:SF6 27 366 2.0E-143 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 SMART SM00937 84 194 2.5E-54 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 UPTC3659_RS01395 9988980cc9273773e35e7e2300235841 366 PANTHER PTHR11075 27 366 2.0E-143 T 23-04-2016 UPTC3659_RS08980 a81097931c81a0620bbe121fd8e0fba3 344 Pfam PF00691 OmpA family 260 337 1.0E-4 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS08980 a81097931c81a0620bbe121fd8e0fba3 344 SUPERFAMILY SSF103088 258 343 7.98E-12 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS08980 a81097931c81a0620bbe121fd8e0fba3 344 Gene3D G3DSA:3.30.1330.60 255 343 4.6E-10 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS07885 82043c45aa38185350031fd90a421f1e 179 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 UPTC3659_RS07885 82043c45aa38185350031fd90a421f1e 179 PANTHER PTHR17224 3 175 3.3E-57 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 UPTC3659_RS07885 82043c45aa38185350031fd90a421f1e 179 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 169 32.264 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 UPTC3659_RS07885 82043c45aa38185350031fd90a421f1e 179 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 102 112 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 UPTC3659_RS07885 82043c45aa38185350031fd90a421f1e 179 PANTHER PTHR17224:SF1 3 175 3.3E-57 T 23-04-2016 UPTC3659_RS07885 82043c45aa38185350031fd90a421f1e 179 Pfam PF01195 Peptidyl-tRNA hydrolase 3 174 1.0E-53 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 UPTC3659_RS07885 82043c45aa38185350031fd90a421f1e 179 Gene3D G3DSA:3.40.50.1470 1 176 8.4E-58 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 UPTC3659_RS07885 82043c45aa38185350031fd90a421f1e 179 SUPERFAMILY SSF53178 1 175 4.58E-55 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 UPTC3659_RS07885 82043c45aa38185350031fd90a421f1e 179 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 175 6.2E-55 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 Gene3D G3DSA:3.30.70.240 398 479 1.3E-29 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 596 5.3E-293 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 SUPERFAMILY SSF52540 2 218 7.02E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 Gene3D G3DSA:3.30.70.870 303 397 2.3E-26 T 23-04-2016 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 PRINTS PR00315 GTP-binding elongation factor signature 86 97 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 PRINTS PR00315 GTP-binding elongation factor signature 70 80 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 PRINTS PR00315 GTP-binding elongation factor signature 122 131 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 PRINTS PR00315 GTP-binding elongation factor signature 6 19 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 PRINTS PR00315 GTP-binding elongation factor signature 50 58 1.2E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 SUPERFAMILY SSF50447 179 300 3.98E-28 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 133 5.7E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 Pfam PF00679 Elongation factor G C-terminus 395 478 1.2E-21 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 Gene3D G3DSA:2.40.30.10 205 302 3.2E-25 T 23-04-2016 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 PANTHER PTHR23115:SF14 2 590 3.5E-270 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 Pfam PF03144 Elongation factor Tu domain 2 218 286 1.8E-10 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 PANTHER PTHR23115 2 590 3.5E-270 T 23-04-2016 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 Gene3D G3DSA:2.40.50.250 480 574 7.9E-41 T 23-04-2016 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 6.7E-55 T 23-04-2016 UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 Gene3D G3DSA:3.40.50.300 2 204 2.7E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 SUPERFAMILY SSF54980 396 510 1.1E-26 T 23-04-2016 IPR009022 Elongation factor G, III-V domain UPTC3659_RS08645 53393d0bd214711c8feac499877bc5c7 602 SUPERFAMILY SSF54980 302 385 4.53E-9 T 23-04-2016 IPR009022 Elongation factor G, III-V domain UPTC3659_RS05660 5db9d4a010140b0a31a8312b76b21fe5 446 Gene3D G3DSA:1.20.1600.10 42 435 4.0E-42 T 23-04-2016 UPTC3659_RS05660 5db9d4a010140b0a31a8312b76b21fe5 446 PANTHER PTHR30203 26 436 2.3E-40 T 23-04-2016 UPTC3659_RS05660 5db9d4a010140b0a31a8312b76b21fe5 446 SUPERFAMILY SSF56954 1 434 1.02E-54 T 23-04-2016 UPTC3659_RS05660 5db9d4a010140b0a31a8312b76b21fe5 446 PANTHER PTHR30203:SF13 26 436 2.3E-40 T 23-04-2016 UPTC3659_RS05660 5db9d4a010140b0a31a8312b76b21fe5 446 Pfam PF02321 Outer membrane efflux protein 53 235 4.3E-18 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 UPTC3659_RS05660 5db9d4a010140b0a31a8312b76b21fe5 446 Pfam PF02321 Outer membrane efflux protein 266 436 6.2E-12 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 UPTC3659_RS02950 18e9c791c4e0a7042e4c06296b264ead 203 SUPERFAMILY SSF52141 30 203 2.85E-26 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS02950 18e9c791c4e0a7042e4c06296b264ead 203 Gene3D G3DSA:3.40.470.10 30 202 3.0E-23 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS02950 18e9c791c4e0a7042e4c06296b264ead 203 Pfam PF03167 Uracil DNA glycosylase superfamily 60 196 7.2E-13 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 260 9.9E-49 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 260 47.267 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 2 259 9.7E-72 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 Gene3D G3DSA:1.10.8.100 197 261 4.9E-10 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 Gene3D G3DSA:3.40.50.150 2 191 7.8E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 61 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 SMART SM00650 18 191 8.8E-55 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 SUPERFAMILY SSF53335 1 262 1.84E-59 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 PANTHER PTHR11727 2 261 3.8E-61 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm UPTC3659_RS00120 54f602f2a50e3b897108f473b7f7bf9e 273 PANTHER PTHR11727:SF7 2 261 3.8E-61 T 23-04-2016 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 Gene3D G3DSA:1.10.560.10 3 187 3.4E-48 T 23-04-2016 IPR027413 GroEL-like equatorial domain UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 Gene3D G3DSA:1.10.560.10 366 516 8.7E-39 T 23-04-2016 IPR027413 GroEL-like equatorial domain UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 Gene3D G3DSA:3.50.7.10 188 365 3.2E-100 T 23-04-2016 IPR027409 GroEL-like apical domain UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 SUPERFAMILY SSF52029 183 375 2.99E-84 T 23-04-2016 IPR027409 GroEL-like apical domain UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 1.4E-261 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 PRINTS PR00298 60kDa chaperonin signature 82 109 2.4E-72 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 PRINTS PR00298 60kDa chaperonin signature 26 52 2.4E-72 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 PRINTS PR00298 60kDa chaperonin signature 349 374 2.4E-72 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 PRINTS PR00298 60kDa chaperonin signature 397 418 2.4E-72 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 PRINTS PR00298 60kDa chaperonin signature 267 290 2.4E-72 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 SUPERFAMILY SSF48592 6 133 7.63E-74 T 23-04-2016 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 SUPERFAMILY SSF48592 405 519 7.63E-74 T 23-04-2016 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 PANTHER PTHR11353 1 545 1.0E-243 T 23-04-2016 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 SUPERFAMILY SSF54849 136 203 1.21E-26 T 23-04-2016 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 5.9E-103 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 UPTC3659_RS06260 6933ee26534f92866d35550f37424eb1 545 Hamap MF_00600 60 kDa chaperonin [groL]. 1 544 41.864 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 SMART SM00434 14 466 7.0E-287 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Gene3D G3DSA:2.120.10.90 498 660 8.0E-122 T 23-04-2016 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Gene3D G3DSA:2.120.10.90 697 839 8.0E-122 T 23-04-2016 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Gene3D G3DSA:3.30.1360.40 239 333 6.7E-37 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 696 742 2.3E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 1.4E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 551 2.5E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 799 843 1.1E-8 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 655 4.6E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 747 794 1.2E-10 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 847 28.92 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 PANTHER PTHR10169 7 677 0.0 T 23-04-2016 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 PANTHER PTHR10169 713 818 0.0 T 23-04-2016 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 SUPERFAMILY SSF56719 34 488 3.27E-177 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 SUPERFAMILY SSF101904 500 660 1.57E-97 T 23-04-2016 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 SUPERFAMILY SSF101904 697 854 1.57E-97 T 23-04-2016 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 11 667 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Gene3D G3DSA:3.90.199.10 34 238 3.0E-120 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Gene3D G3DSA:3.90.199.10 335 400 3.0E-120 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 PANTHER PTHR10169:SF48 7 677 0.0 T 23-04-2016 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 PANTHER PTHR10169:SF48 713 818 0.0 T 23-04-2016 UPTC3659_RS06820 81eab7f959a939949318ddb24ae71a19 862 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 473 7.7E-158 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 UPTC3659_RS00435 eb1394d21bce2e7468dccc14054ba190 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.2E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00435 eb1394d21bce2e7468dccc14054ba190 122 PANTHER PTHR11761 1 122 9.7E-73 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00435 eb1394d21bce2e7468dccc14054ba190 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.394 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00435 eb1394d21bce2e7468dccc14054ba190 122 SMART SM01374 1 122 1.6E-83 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00435 eb1394d21bce2e7468dccc14054ba190 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.3E-57 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS00435 eb1394d21bce2e7468dccc14054ba190 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site UPTC3659_RS00435 eb1394d21bce2e7468dccc14054ba190 122 SUPERFAMILY SSF50193 1 122 1.18E-51 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00435 eb1394d21bce2e7468dccc14054ba190 122 Gene3D G3DSA:2.40.150.20 1 122 4.6E-54 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 SUPERFAMILY SSF46977 463 658 1.31E-58 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 SUPERFAMILY SSF56425 251 374 2.39E-36 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 Pfam PF00890 FAD binding domain 7 414 6.9E-118 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 PANTHER PTHR11632 1 114 2.8E-241 T 23-04-2016 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 PANTHER PTHR11632 136 594 2.8E-241 T 23-04-2016 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 Gene3D G3DSA:1.20.58.100 445 553 1.5E-34 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 PANTHER PTHR11632:SF5 1 114 2.8E-241 T 23-04-2016 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 PANTHER PTHR11632:SF5 136 594 2.8E-241 T 23-04-2016 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 Pfam PF02910 Fumarate reductase flavoprotein C-term 473 602 1.4E-37 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 Gene3D G3DSA:3.90.700.10 258 360 1.2E-34 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 602 7.3E-220 T 23-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 Gene3D G3DSA:4.10.80.40 554 602 1.5E-11 T 23-04-2016 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 PIRSF PIRSF000171 1 590 3.7E-30 T 23-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 Gene3D G3DSA:3.50.50.60 370 436 6.1E-89 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 Gene3D G3DSA:3.50.50.60 5 257 6.1E-89 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 SUPERFAMILY SSF51905 6 274 2.83E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS01755 ad7dab87fbb99171b7de891e91f0b1fd 663 SUPERFAMILY SSF51905 378 440 2.83E-59 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 4 594 3.3E-206 T 23-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 1.5E-57 T 23-04-2016 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 151 172 1.5E-57 T 23-04-2016 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 410 429 1.5E-57 T 23-04-2016 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 104 124 1.5E-57 T 23-04-2016 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 1.5E-57 T 23-04-2016 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 1.5E-57 T 23-04-2016 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 76 101 1.5E-57 T 23-04-2016 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 78 98 9.6E-6 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 258 280 9.6E-6 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 409 431 9.6E-6 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 114 3.2E-18 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 Pfam PF00361 Proton-conducting membrane transporter 127 417 2.0E-77 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PANTHER PTHR22773:SF50 1 554 3.2E-200 T 23-04-2016 UPTC3659_RS08255 a6d8966edb47ad37ae18cd8a48637e5e 600 PANTHER PTHR22773 1 554 3.2E-200 T 23-04-2016 UPTC3659_RS05545 1ab5794c28d774d466aea558a4dcc77a 304 PANTHER PTHR11562 5 294 7.2E-72 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UPTC3659_RS05545 1ab5794c28d774d466aea558a4dcc77a 304 PANTHER PTHR11562:SF55 5 294 7.2E-72 T 23-04-2016 UPTC3659_RS05545 1ab5794c28d774d466aea558a4dcc77a 304 Gene3D G3DSA:3.30.70.1350 203 287 1.1E-22 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain UPTC3659_RS05545 1ab5794c28d774d466aea558a4dcc77a 304 SUPERFAMILY SSF160240 206 287 3.66E-20 T 23-04-2016 UPTC3659_RS05545 1ab5794c28d774d466aea558a4dcc77a 304 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 285 1.8E-19 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain UPTC3659_RS05545 1ab5794c28d774d466aea558a4dcc77a 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 286 1.4E-70 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UPTC3659_RS05545 1ab5794c28d774d466aea558a4dcc77a 304 Gene3D G3DSA:1.20.1510.10 5 202 7.6E-43 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain UPTC3659_RS05545 1ab5794c28d774d466aea558a4dcc77a 304 SUPERFAMILY SSF161111 3 203 2.88E-48 T 23-04-2016 UPTC3659_RS05545 1ab5794c28d774d466aea558a4dcc77a 304 Pfam PF01545 Cation efflux family 9 202 1.8E-40 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UPTC3659_RS08615 e904fae2f11d82e09544e3eb9c1da097 340 SUPERFAMILY SSF47240 16 336 5.07E-85 T 23-04-2016 IPR009078 Ferritin-like superfamily UPTC3659_RS08615 e904fae2f11d82e09544e3eb9c1da097 340 PANTHER PTHR23409 35 334 1.1E-61 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 UPTC3659_RS08615 e904fae2f11d82e09544e3eb9c1da097 340 Gene3D G3DSA:1.10.620.20 16 313 1.9E-90 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 UPTC3659_RS08615 e904fae2f11d82e09544e3eb9c1da097 340 PIRSF PIRSF000355 1 340 1.3E-109 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 UPTC3659_RS08615 e904fae2f11d82e09544e3eb9c1da097 340 PANTHER PTHR23409:SF18 35 334 1.1E-61 T 23-04-2016 UPTC3659_RS08615 e904fae2f11d82e09544e3eb9c1da097 340 Pfam PF00268 Ribonucleotide reductase, small chain 30 305 4.4E-63 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 UPTC3659_RS02260 8d0f6ba26f9c6b50cd5595110736ce1a 146 PANTHER PTHR22573 23 138 3.6E-15 T 23-04-2016 UPTC3659_RS02260 8d0f6ba26f9c6b50cd5595110736ce1a 146 Pfam PF00156 Phosphoribosyl transferase domain 12 144 4.4E-21 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 UPTC3659_RS02260 8d0f6ba26f9c6b50cd5595110736ce1a 146 Gene3D G3DSA:3.40.50.2020 3 143 2.8E-25 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS02260 8d0f6ba26f9c6b50cd5595110736ce1a 146 SUPERFAMILY SSF53271 3 137 4.46E-25 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS02260 8d0f6ba26f9c6b50cd5595110736ce1a 146 PANTHER PTHR22573:SF9 23 138 3.6E-15 T 23-04-2016 UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 PRINTS PR00956 Flagellar motor switch protein FliN signature 245 260 2.6E-17 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 PRINTS PR00956 Flagellar motor switch protein FliN signature 232 245 2.6E-17 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 PRINTS PR00956 Flagellar motor switch protein FliN signature 199 215 2.6E-17 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 PRINTS PR00956 Flagellar motor switch protein FliN signature 216 232 2.6E-17 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 PANTHER PTHR30034 1 279 1.3E-16 T 23-04-2016 UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 Gene3D G3DSA:2.30.330.10 192 279 7.4E-30 T 23-04-2016 UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 PANTHER PTHR30034:SF1 1 279 1.3E-16 T 23-04-2016 UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 Gene3D G3DSA:3.40.1550.10 1 110 4.3E-5 T 23-04-2016 IPR028976 CheC-like domain UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 200 268 6.7E-22 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 SUPERFAMILY SSF101801 197 277 7.98E-22 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 SUPERFAMILY SSF103039 44 115 1.57E-5 T 23-04-2016 IPR028976 CheC-like domain UPTC3659_RS01270 7b89cbc92fd47ee0594154f51d9cca58 279 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 196 271 2.5E-26 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 UPTC3659_RS07430 43e49b3b2780e5d7f5df860777c96c78 125 Pfam PF00072 Response regulator receiver domain 4 116 6.0E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS07430 43e49b3b2780e5d7f5df860777c96c78 125 SUPERFAMILY SSF52172 2 121 2.56E-35 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS07430 43e49b3b2780e5d7f5df860777c96c78 125 SMART SM00448 1 116 9.4E-36 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS07430 43e49b3b2780e5d7f5df860777c96c78 125 PANTHER PTHR26402 1 120 1.3E-37 T 23-04-2016 UPTC3659_RS07430 43e49b3b2780e5d7f5df860777c96c78 125 Gene3D G3DSA:3.40.50.2300 2 122 4.0E-37 T 23-04-2016 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 SUPERFAMILY SSF55874 200 330 5.63E-24 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 PANTHER PTHR24423:SF445 10 29 4.6E-34 T 23-04-2016 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 PANTHER PTHR24423:SF445 127 329 4.6E-34 T 23-04-2016 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 329 6.8E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 191 2.3E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 Gene3D G3DSA:1.10.287.130 124 181 4.6E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 302 4.7E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 321 4.7E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 290 4.7E-9 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 SMART SM00387 235 338 2.3E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 SUPERFAMILY SSF47384 123 191 2.55E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 Gene3D G3DSA:3.30.565.10 182 337 1.0E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 PANTHER PTHR24423 10 29 4.6E-34 T 23-04-2016 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 PANTHER PTHR24423 127 329 4.6E-34 T 23-04-2016 UPTC3659_RS03180 ed32601d681e5573386e2f8ace336868 338 SMART SM00388 131 195 2.2E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 PANTHER PTHR24220:SF578 3 228 7.1E-91 T 23-04-2016 UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 PANTHER PTHR24220:SF578 448 604 7.1E-91 T 23-04-2016 UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 Gene3D G3DSA:3.40.50.300 1 217 2.4E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 SMART SM00382 26 213 3.4E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 SUPERFAMILY SSF52540 1 221 5.32E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 Pfam PF02687 FtsX-like permease family 523 636 1.2E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 PANTHER PTHR24220 3 228 7.1E-91 T 23-04-2016 UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 PANTHER PTHR24220 448 604 7.1E-91 T 23-04-2016 UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 Pfam PF00005 ABC transporter 17 165 8.0E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS05665 dcd8967135e4effb5881c7e5cd2aac56 643 Pfam PF12704 MacB-like periplasmic core domain 263 486 1.8E-32 T 23-04-2016 IPR025857 MacB-like periplasmic core domain UPTC3659_RS00795 f7ede9cc74974ed2184c8a2e9703a262 696 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 547 633 2.3E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS00795 f7ede9cc74974ed2184c8a2e9703a262 696 SUPERFAMILY SSF58104 496 693 9.81E-48 T 23-04-2016 UPTC3659_RS00795 f7ede9cc74974ed2184c8a2e9703a262 696 SUPERFAMILY SSF58104 377 407 9.81E-48 T 23-04-2016 UPTC3659_RS00795 f7ede9cc74974ed2184c8a2e9703a262 696 Gene3D G3DSA:3.30.450.20 189 322 1.6E-9 T 23-04-2016 UPTC3659_RS00795 f7ede9cc74974ed2184c8a2e9703a262 696 PANTHER PTHR32089 441 461 6.5E-38 T 23-04-2016 UPTC3659_RS00795 f7ede9cc74974ed2184c8a2e9703a262 696 PANTHER PTHR32089 507 687 6.5E-38 T 23-04-2016 UPTC3659_RS00795 f7ede9cc74974ed2184c8a2e9703a262 696 SMART SM00283 504 695 4.4E-26 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS00795 f7ede9cc74974ed2184c8a2e9703a262 696 Gene3D G3DSA:1.10.287.950 496 687 4.5E-44 T 23-04-2016 UPTC3659_RS00965 23bb785e654001ef85e000ca82080871 81 PANTHER PTHR24960 1 77 7.5E-17 T 23-04-2016 UPTC3659_RS00965 23bb785e654001ef85e000ca82080871 81 PANTHER PTHR24960:SF38 1 77 7.5E-17 T 23-04-2016 UPTC3659_RS00965 23bb785e654001ef85e000ca82080871 81 SUPERFAMILY SSF54862 6 73 1.36E-17 T 23-04-2016 UPTC3659_RS00965 23bb785e654001ef85e000ca82080871 81 Gene3D G3DSA:3.30.70.20 5 73 3.4E-17 T 23-04-2016 UPTC3659_RS00965 23bb785e654001ef85e000ca82080871 81 Pfam PF00037 4Fe-4S binding domain 8 25 7.2E-5 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS01200 e10f8823a3ba8e33b712a461d093b5cb 140 Gene3D G3DSA:2.30.30.180 79 136 1.5E-4 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal UPTC3659_RS01200 e10f8823a3ba8e33b712a461d093b5cb 140 Gene3D G3DSA:3.30.300.70 3 70 1.0E-21 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal UPTC3659_RS01200 e10f8823a3ba8e33b712a461d093b5cb 140 SUPERFAMILY SSF74942 75 140 6.8E-8 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal UPTC3659_RS01200 e10f8823a3ba8e33b712a461d093b5cb 140 Pfam PF02576 Putative ribosome maturation factor RimP 3 135 3.5E-39 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 UPTC3659_RS01200 e10f8823a3ba8e33b712a461d093b5cb 140 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 140 18.9 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 UPTC3659_RS01200 e10f8823a3ba8e33b712a461d093b5cb 140 PANTHER PTHR33867 3 140 3.4E-26 T 23-04-2016 UPTC3659_RS01200 e10f8823a3ba8e33b712a461d093b5cb 140 SUPERFAMILY SSF75420 6 74 1.96E-16 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal UPTC3659_RS01200 e10f8823a3ba8e33b712a461d093b5cb 140 PANTHER PTHR33867:SF1 3 140 3.4E-26 T 23-04-2016 UPTC3659_RS05565 fac9314bf4c8599f7d5669d200443ebc 246 Gene3D G3DSA:3.40.50.620 5 239 1.5E-69 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS05565 fac9314bf4c8599f7d5669d200443ebc 246 PANTHER PTHR23090 16 240 2.6E-64 T 23-04-2016 UPTC3659_RS05565 fac9314bf4c8599f7d5669d200443ebc 246 SUPERFAMILY SSF52402 3 239 1.59E-68 T 23-04-2016 UPTC3659_RS05565 fac9314bf4c8599f7d5669d200443ebc 246 Pfam PF02540 NAD synthase 8 236 3.6E-73 T 23-04-2016 IPR022310 NAD/GMP synthase UPTC3659_RS05565 fac9314bf4c8599f7d5669d200443ebc 246 TIGRFAM TIGR00552 nadE: NAD+ synthetase 5 243 1.2E-73 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 UPTC3659_RS05565 fac9314bf4c8599f7d5669d200443ebc 246 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 1 239 31.794 T 23-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 UPTC3659_RS06045 69d24b54cb24c0d0deaa0f2a825c1b84 446 PANTHER PTHR21337 2 444 8.5E-264 T 23-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 UPTC3659_RS06045 69d24b54cb24c0d0deaa0f2a825c1b84 446 SUPERFAMILY SSF51569 2 441 4.61E-186 T 23-04-2016 UPTC3659_RS06045 69d24b54cb24c0d0deaa0f2a825c1b84 446 Pfam PF01474 Class-II DAHP synthetase family 3 437 3.2E-193 T 23-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 UPTC3659_RS06045 69d24b54cb24c0d0deaa0f2a825c1b84 446 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 3 443 2.9E-202 T 23-04-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 SUPERFAMILY SSF54814 201 279 1.18E-24 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 Gene3D G3DSA:3.30.300.20 280 344 1.9E-17 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 Pfam PF13184 NusA-like KH domain 231 299 5.7E-22 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 340 9.9E-103 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 Gene3D G3DSA:2.40.50.140 136 199 3.7E-14 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 SUPERFAMILY SSF50249 134 200 1.46E-9 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 PANTHER PTHR22648:SF0 1 340 4.7E-71 T 23-04-2016 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 SUPERFAMILY SSF54814 281 340 1.31E-8 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 360 23.044 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 PANTHER PTHR22648 1 340 4.7E-71 T 23-04-2016 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 SUPERFAMILY SSF69705 4 124 1.7E-21 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 Pfam PF08529 NusA N-terminal domain 4 120 2.4E-13 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 Gene3D G3DSA:3.30.300.20 200 278 2.7E-30 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta UPTC3659_RS01705 7615a4275c2e2efc35b4c374fbc4b5c6 363 Gene3D G3DSA:3.30.1480.10 3 115 2.2E-14 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 UPTC3659_RS08585 8e7770351889529af291c5a5f3e78eeb 213 PANTHER PTHR11002:SF13 1 211 1.5E-66 T 23-04-2016 UPTC3659_RS08585 8e7770351889529af291c5a5f3e78eeb 213 SUPERFAMILY SSF53056 1 209 1.31E-63 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UPTC3659_RS08585 8e7770351889529af291c5a5f3e78eeb 213 SMART SM00947 27 196 2.2E-58 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UPTC3659_RS08585 8e7770351889529af291c5a5f3e78eeb 213 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 23-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UPTC3659_RS08585 8e7770351889529af291c5a5f3e78eeb 213 Pfam PF00484 Carbonic anhydrase 34 192 5.4E-48 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UPTC3659_RS08585 8e7770351889529af291c5a5f3e78eeb 213 PANTHER PTHR11002 1 211 1.5E-66 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UPTC3659_RS08585 8e7770351889529af291c5a5f3e78eeb 213 Gene3D G3DSA:3.40.1050.10 1 206 9.5E-66 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 404 50.399 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 PANTHER PTHR11587 6 405 2.0E-220 T 23-04-2016 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 Gene3D G3DSA:1.20.5.470 378 395 4.5E-4 T 23-04-2016 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 SUPERFAMILY SSF52402 6 171 2.65E-46 T 23-04-2016 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 Pfam PF00764 Arginosuccinate synthase 9 396 1.8E-151 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 PANTHER PTHR11587:SF2 6 405 2.0E-220 T 23-04-2016 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 Gene3D G3DSA:3.40.50.620 6 163 4.9E-66 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 SUPERFAMILY SSF69864 177 403 6.41E-91 T 23-04-2016 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 396 2.4E-142 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 Gene3D G3DSA:3.90.1260.10 164 361 1.3E-93 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS04360 8f9555c932de77c4e17cf727d21d2348 406 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS02065 abd463ef5d8905abb94b9a620a06ea9f 250 Pfam PF01925 Sulfite exporter TauE/SafE 11 243 7.8E-42 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 UPTC3659_RS02065 abd463ef5d8905abb94b9a620a06ea9f 250 PANTHER PTHR30269 3 249 3.5E-68 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 UPTC3659_RS02065 abd463ef5d8905abb94b9a620a06ea9f 250 PANTHER PTHR30269:SF13 3 249 3.5E-68 T 23-04-2016 UPTC3659_RS00125 968a5df025b1bbd7ac96db69a0eb8a86 177 Gene3D G3DSA:3.40.50.1580 16 170 1.5E-13 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 UPTC3659_RS00125 968a5df025b1bbd7ac96db69a0eb8a86 177 SUPERFAMILY SSF53167 5 169 1.09E-19 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 UPTC3659_RS03735 1fada428b1727e9297655c712fe48dc3 276 Gene3D G3DSA:2.60.200.30 143 247 3.1E-33 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 UPTC3659_RS03735 1fada428b1727e9297655c712fe48dc3 276 PANTHER PTHR20275 33 276 2.0E-61 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 UPTC3659_RS03735 1fada428b1727e9297655c712fe48dc3 276 Pfam PF01513 ATP-NAD kinase 56 258 5.3E-45 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 UPTC3659_RS03735 1fada428b1727e9297655c712fe48dc3 276 Gene3D G3DSA:3.40.50.10330 52 142 9.2E-24 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 UPTC3659_RS03735 1fada428b1727e9297655c712fe48dc3 276 SUPERFAMILY SSF111331 8 275 1.44E-71 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain UPTC3659_RS03735 1fada428b1727e9297655c712fe48dc3 276 Hamap MF_00361 NAD kinase [nadK]. 11 274 27.655 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 PANTHER PTHR11079 86 226 5.6E-24 T 23-04-2016 UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 PANTHER PTHR11079 4 65 5.6E-24 T 23-04-2016 UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 Gene3D G3DSA:3.40.430.10 173 259 2.1E-12 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 Gene3D G3DSA:3.40.140.10 2 170 2.1E-28 T 23-04-2016 UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 125 6.7E-18 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 PANTHER PTHR11079:SF10 86 226 5.6E-24 T 23-04-2016 UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 PANTHER PTHR11079:SF10 4 65 5.6E-24 T 23-04-2016 UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 SUPERFAMILY SSF53597 174 295 1.07E-15 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 248 8.2E-82 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 UPTC3659_RS01215 5cf7673d1462bf1c1898ccb23d6b70ad 330 SUPERFAMILY SSF53927 3 168 3.18E-35 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 UPTC3659_RS01490 b7927e124d0f677ab33e8c802c8cd310 479 PANTHER PTHR42002 2 475 6.8E-87 T 23-04-2016 UPTC3659_RS01490 b7927e124d0f677ab33e8c802c8cd310 479 PANTHER PTHR42002:SF1 2 475 6.8E-87 T 23-04-2016 UPTC3659_RS01490 b7927e124d0f677ab33e8c802c8cd310 479 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 59 468 3.2E-95 T 23-04-2016 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 UPTC3659_RS01490 b7927e124d0f677ab33e8c802c8cd310 479 Pfam PF03606 C4-dicarboxylate anaerobic carrier 12 477 3.2E-76 T 23-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 UPTC3659_RS05120 6e581ca95cc188a16facd798d3d0ac7b 355 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 24 305 7.5E-26 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS05120 6e581ca95cc188a16facd798d3d0ac7b 355 PANTHER PTHR32182:SF13 216 353 2.9E-13 T 23-04-2016 UPTC3659_RS05120 6e581ca95cc188a16facd798d3d0ac7b 355 Gene3D G3DSA:3.40.50.300 1 332 2.8E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05120 6e581ca95cc188a16facd798d3d0ac7b 355 PANTHER PTHR32182 216 353 2.9E-13 T 23-04-2016 UPTC3659_RS05120 6e581ca95cc188a16facd798d3d0ac7b 355 SUPERFAMILY SSF52540 1 343 2.98E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02975 d362e29ee618c6d2611e434f4bb95248 214 PANTHER PTHR35891:SF1 10 212 2.6E-30 T 23-04-2016 UPTC3659_RS02975 d362e29ee618c6d2611e434f4bb95248 214 PANTHER PTHR35891 10 212 2.6E-30 T 23-04-2016 UPTC3659_RS02975 d362e29ee618c6d2611e434f4bb95248 214 Gene3D G3DSA:3.40.30.10 22 213 5.6E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS02975 d362e29ee618c6d2611e434f4bb95248 214 Pfam PF01323 DSBA-like thioredoxin domain 108 194 3.7E-6 T 23-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 UPTC3659_RS02975 d362e29ee618c6d2611e434f4bb95248 214 SUPERFAMILY SSF52833 20 211 7.35E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 PANTHER PTHR32089 446 647 5.9E-56 T 23-04-2016 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 PANTHER PTHR32089:SF64 446 647 5.9E-56 T 23-04-2016 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 PANTHER PTHR32089:SF64 97 347 5.9E-56 T 23-04-2016 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 SMART SM00283 446 655 3.8E-20 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 SUPERFAMILY SSF103190 65 183 2.35E-14 T 23-04-2016 IPR029151 Periplasmic sensor domain-like UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 SUPERFAMILY SSF58104 336 367 1.31E-44 T 23-04-2016 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 SUPERFAMILY SSF58104 456 654 1.31E-44 T 23-04-2016 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 PANTHER PTHR32089 97 347 5.9E-56 T 23-04-2016 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 Gene3D G3DSA:3.30.450.20 73 175 7.9E-25 T 23-04-2016 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 Gene3D G3DSA:1.10.287.950 456 650 3.2E-42 T 23-04-2016 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 Pfam PF02743 Cache domain 67 237 3.9E-27 T 23-04-2016 IPR033479 Double Cache domain 1 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 460 489 1.6E-18 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 563 592 1.6E-18 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 534 561 1.6E-18 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS02140 11df69e3114a0e6e6f9408c4db31546e 656 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 497 586 2.0E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 5 517 1.8E-192 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 Gene3D G3DSA:3.30.1370.10 216 272 7.5E-7 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 Pfam PF01966 HD domain 335 425 1.6E-16 T 23-04-2016 IPR006674 HD domain UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 SUPERFAMILY SSF109604 308 470 1.41E-28 T 23-04-2016 UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 SUPERFAMILY SSF54791 205 300 5.06E-12 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 Pfam PF12072 Domain of unknown function (DUF3552) 3 201 2.5E-21 T 23-04-2016 IPR022711 Ribonuclease Y, N-terminal UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 Gene3D G3DSA:1.10.3210.10 313 492 2.3E-39 T 23-04-2016 IPR006674 HD domain UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 TIGRFAM TIGR00277 HDIG: HDIG domain 329 406 9.8E-23 T 23-04-2016 IPR006675 HDIG domain UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 PANTHER PTHR12826 209 516 5.2E-104 T 23-04-2016 UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 SMART SM00471 329 435 1.2E-11 T 23-04-2016 IPR003607 HD/PDEase domain UPTC3659_RS07250 e5b3c37278dc72d4d481bbe8f70d2d1c 517 Hamap MF_00335 Ribonuclease Y [rny]. 2 517 23.068 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 UPTC3659_RS03165 3a21bc2fbb0c809219227f3e4040dd2e 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 249 8.9E-60 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UPTC3659_RS03165 3a21bc2fbb0c809219227f3e4040dd2e 252 Gene3D G3DSA:3.40.190.10 141 200 8.1E-18 T 23-04-2016 UPTC3659_RS03165 3a21bc2fbb0c809219227f3e4040dd2e 252 PANTHER PTHR18966 32 249 1.4E-41 T 23-04-2016 UPTC3659_RS03165 3a21bc2fbb0c809219227f3e4040dd2e 252 PANTHER PTHR18966:SF152 32 249 1.4E-41 T 23-04-2016 UPTC3659_RS03165 3a21bc2fbb0c809219227f3e4040dd2e 252 SMART SM00062 34 250 9.4E-63 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UPTC3659_RS03165 3a21bc2fbb0c809219227f3e4040dd2e 252 Gene3D G3DSA:3.40.190.10 14 140 2.9E-43 T 23-04-2016 UPTC3659_RS03165 3a21bc2fbb0c809219227f3e4040dd2e 252 SUPERFAMILY SSF53850 1 249 4.54E-61 T 23-04-2016 UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 Gene3D G3DSA:1.10.1520.10 2 141 5.0E-47 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 SMART SM00358 153 220 2.2E-17 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 SMART SM00535 17 146 6.4E-47 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 Pfam PF00035 Double-stranded RNA binding motif 153 219 7.7E-14 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 SUPERFAMILY SSF54768 106 221 1.54E-23 T 23-04-2016 UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 Hamap MF_00104 Ribonuclease 3 [rnc]. 5 216 28.318 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 Gene3D G3DSA:3.30.160.20 151 220 5.2E-24 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 5 219 1.5E-70 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 SUPERFAMILY SSF69065 2 156 1.1E-47 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 PANTHER PTHR11207 2 219 2.1E-71 T 23-04-2016 UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 UPTC3659_RS08530 1dc8b9727946163b7adc6122655f3c45 222 Pfam PF14622 Ribonuclease-III-like 15 136 4.3E-33 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 UPTC3659_RS06275 3c0fa192d37203e987ab49d3dc2c5b3f 172 SUPERFAMILY SSF69754 4 111 4.84E-25 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 UPTC3659_RS06275 3c0fa192d37203e987ab49d3dc2c5b3f 172 Gene3D G3DSA:3.30.160.100 1 99 2.1E-21 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 UPTC3659_RS06275 3c0fa192d37203e987ab49d3dc2c5b3f 172 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 117 171 1.9E-13 T 23-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal UPTC3659_RS06275 3c0fa192d37203e987ab49d3dc2c5b3f 172 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 9.1E-17 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 UPTC3659_RS06275 3c0fa192d37203e987ab49d3dc2c5b3f 172 PANTHER PTHR33231 1 171 1.1E-23 T 23-04-2016 UPTC3659_RS06275 3c0fa192d37203e987ab49d3dc2c5b3f 172 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 96 1.6E-20 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 UPTC3659_RS03810 949b57fe5311bbbcf9c2349fa8fe8780 350 Pfam PF03773 Predicted permease 19 347 1.4E-49 T 23-04-2016 IPR005524 Predicted permease DUF318 UPTC3659_RS03810 949b57fe5311bbbcf9c2349fa8fe8780 350 PANTHER PTHR34184:SF2 53 179 1.8E-46 T 23-04-2016 UPTC3659_RS03810 949b57fe5311bbbcf9c2349fa8fe8780 350 PANTHER PTHR34184:SF2 195 350 1.8E-46 T 23-04-2016 UPTC3659_RS03810 949b57fe5311bbbcf9c2349fa8fe8780 350 PANTHER PTHR34184 53 179 1.8E-46 T 23-04-2016 UPTC3659_RS03810 949b57fe5311bbbcf9c2349fa8fe8780 350 PANTHER PTHR34184 195 350 1.8E-46 T 23-04-2016 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 Gene3D G3DSA:3.10.310.10 134 222 1.5E-22 T 23-04-2016 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 Gene3D G3DSA:3.10.310.10 1 133 3.7E-35 T 23-04-2016 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 PANTHER PTHR31689 1 215 3.1E-46 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 246 2.4E-57 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 60 74 - T 23-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 248 25.292 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 Pfam PF01678 Diaminopimelate epimerase 3 106 4.3E-25 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 Pfam PF01678 Diaminopimelate epimerase 133 216 8.9E-11 T 23-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 SUPERFAMILY SSF54506 129 246 6.08E-26 T 23-04-2016 UPTC3659_RS00360 15e5f55676a153ead3f7a1c63134d0f5 249 SUPERFAMILY SSF54506 1 113 4.71E-30 T 23-04-2016 UPTC3659_RS04235 4286af630caac224f1e4388267d3366d 284 PANTHER PTHR22911 1 280 1.1E-39 T 23-04-2016 UPTC3659_RS04235 4286af630caac224f1e4388267d3366d 284 Pfam PF00892 EamA-like transporter family 2 137 7.9E-19 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 UPTC3659_RS04235 4286af630caac224f1e4388267d3366d 284 Pfam PF00892 EamA-like transporter family 149 280 4.3E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 UPTC3659_RS04235 4286af630caac224f1e4388267d3366d 284 SUPERFAMILY SSF103481 37 139 3.14E-8 T 23-04-2016 UPTC3659_RS04235 4286af630caac224f1e4388267d3366d 284 SUPERFAMILY SSF103481 189 281 4.05E-7 T 23-04-2016 UPTC3659_RS04235 4286af630caac224f1e4388267d3366d 284 PANTHER PTHR22911:SF23 1 280 1.1E-39 T 23-04-2016 UPTC3659_RS07980 d9d7ba08244b9ef72fe405a84eaba483 257 Pfam PF01975 Survival protein SurE 4 192 4.3E-57 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 UPTC3659_RS07980 d9d7ba08244b9ef72fe405a84eaba483 257 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 3 242 1.5E-71 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 UPTC3659_RS07980 d9d7ba08244b9ef72fe405a84eaba483 257 SUPERFAMILY SSF64167 4 256 1.44E-78 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 UPTC3659_RS07980 d9d7ba08244b9ef72fe405a84eaba483 257 Gene3D G3DSA:3.40.1210.10 3 255 2.6E-83 T 23-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 UPTC3659_RS07980 d9d7ba08244b9ef72fe405a84eaba483 257 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 2 257 36.759 T 23-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 UPTC3659_RS07980 d9d7ba08244b9ef72fe405a84eaba483 257 PANTHER PTHR30457 4 256 4.1E-80 T 23-04-2016 UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 PANTHER PTHR10314 3 300 4.7E-117 T 23-04-2016 UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 297 7.1E-117 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 SUPERFAMILY SSF53686 2 297 2.23E-88 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 Gene3D G3DSA:3.40.50.1100 1 38 7.1E-63 T 23-04-2016 UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 Gene3D G3DSA:3.40.50.1100 146 298 7.1E-63 T 23-04-2016 UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 285 4.0E-59 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 31 44 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 PANTHER PTHR10314:SF110 3 300 4.7E-117 T 23-04-2016 UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 Gene3D G3DSA:3.40.50.1100 39 140 3.4E-36 T 23-04-2016 UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 297 1.3E-121 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 UPTC3659_RS07300 e2f98ef132c6a3829e95ec7b7c852eed 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 29 47 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 916 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:1.10.8.280 292 399 4.8E-19 T 23-04-2016 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 PANTHER PTHR32282 2 941 0.0 T 23-04-2016 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:1.20.1580.10 93 131 1.8E-52 T 23-04-2016 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:1.20.1580.10 400 474 1.8E-52 T 23-04-2016 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:1.20.1580.10 256 289 1.8E-52 T 23-04-2016 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:1.20.1580.10 687 813 8.1E-54 T 23-04-2016 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 SUPERFAMILY SSF52540 7 206 1.51E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 SUPERFAMILY SSF52540 430 566 1.51E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 PANTHER PTHR32282:SF2 2 941 0.0 T 23-04-2016 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:3.40.50.300 5 53 1.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:3.40.50.300 595 661 6.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:3.40.50.300 475 591 1.1E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:3.40.50.300 814 925 6.3E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:3.30.1490.20 202 246 1.1E-11 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Gene3D G3DSA:3.30.1490.20 133 155 1.1E-11 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 SUPERFAMILY SSF52540 613 906 1.35E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 ProSitePatterns PS00211 ABC transporters family signature. 823 837 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS07810 1462bdd80470c48ed829effc50c37eaf 941 Pfam PF00005 ABC transporter 617 853 1.5E-9 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS02490 0d4fba6e4371cb155965a0f16f120a41 129 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 127 6.0E-23 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS02490 0d4fba6e4371cb155965a0f16f120a41 129 PANTHER PTHR30558 10 126 2.1E-18 T 23-04-2016 UPTC3659_RS02490 0d4fba6e4371cb155965a0f16f120a41 129 TIGRFAM TIGR02804 ExbD_2: TonB system transport protein ExbD 7 127 1.9E-47 T 23-04-2016 IPR014171 TonB system transport protein ExbD type-2 GO:0006810|GO:0016020 UPTC3659_RS02490 0d4fba6e4371cb155965a0f16f120a41 129 Gene3D G3DSA:3.10.28.10 27 124 8.6E-4 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 SUPERFAMILY SSF52540 290 448 4.25E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 SUPERFAMILY SSF52540 162 261 4.25E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 PANTHER PTHR11649 178 219 1.6E-12 T 23-04-2016 UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 PANTHER PTHR11649 694 718 1.6E-12 T 23-04-2016 UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 Gene3D G3DSA:3.40.50.300 277 419 3.5E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 PANTHER PTHR11649 301 418 1.6E-12 T 23-04-2016 UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 PANTHER PTHR11649:SF36 301 418 1.6E-12 T 23-04-2016 UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 Gene3D G3DSA:3.40.50.300 133 212 2.6E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 Pfam PF00350 Dynamin family 180 374 2.7E-31 T 23-04-2016 IPR022812 Dynamin superfamily UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 PANTHER PTHR11649:SF36 178 219 1.6E-12 T 23-04-2016 UPTC3659_RS01765 71a71eeb0d4077ce8382dd652117cbc0 741 PANTHER PTHR11649:SF36 694 718 1.6E-12 T 23-04-2016 UPTC3659_RS05830 0f95930ce8b1c80382a8792a49300735 355 SUPERFAMILY SSF88713 143 354 5.78E-56 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 UPTC3659_RS05830 0f95930ce8b1c80382a8792a49300735 355 Gene3D G3DSA:3.20.20.370 142 354 8.2E-63 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 UPTC3659_RS05830 0f95930ce8b1c80382a8792a49300735 355 Pfam PF04748 Divergent polysaccharide deacetylase 148 354 1.1E-53 T 23-04-2016 IPR006837 Protein of unknown function DUF610, YibQ UPTC3659_RS05830 0f95930ce8b1c80382a8792a49300735 355 PANTHER PTHR30105 144 355 7.3E-36 T 23-04-2016 UPTC3659_RS04240 1821c88c30499ce5ad81b0b1be6a3076 418 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 405 8.5E-92 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 UPTC3659_RS04240 1821c88c30499ce5ad81b0b1be6a3076 418 SUPERFAMILY SSF55205 1 417 3.11E-126 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 UPTC3659_RS04240 1821c88c30499ce5ad81b0b1be6a3076 418 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 42.831 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS04240 1821c88c30499ce5ad81b0b1be6a3076 418 Gene3D G3DSA:3.65.10.10 21 217 1.5E-56 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 UPTC3659_RS04240 1821c88c30499ce5ad81b0b1be6a3076 418 Gene3D G3DSA:3.65.10.10 227 415 5.1E-56 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 UPTC3659_RS04240 1821c88c30499ce5ad81b0b1be6a3076 418 PANTHER PTHR21090 1 418 2.0E-160 T 23-04-2016 UPTC3659_RS04240 1821c88c30499ce5ad81b0b1be6a3076 418 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.6E-175 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS06670 c0527793f391982fc72eecf303897bec 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 32 317 1.4E-36 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS06670 c0527793f391982fc72eecf303897bec 343 PANTHER PTHR30482:SF10 93 331 2.1E-88 T 23-04-2016 UPTC3659_RS06670 c0527793f391982fc72eecf303897bec 343 PANTHER PTHR30482:SF10 1 75 2.1E-88 T 23-04-2016 UPTC3659_RS06670 c0527793f391982fc72eecf303897bec 343 PANTHER PTHR30482 93 331 2.1E-88 T 23-04-2016 UPTC3659_RS06670 c0527793f391982fc72eecf303897bec 343 PANTHER PTHR30482 1 75 2.1E-88 T 23-04-2016 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 Gene3D G3DSA:3.30.160.40 219 304 2.4E-22 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 295 35.786 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 3 295 6.3E-99 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 SUPERFAMILY SSF54782 218 303 5.36E-22 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 Gene3D G3DSA:3.40.190.10 108 198 2.0E-33 T 23-04-2016 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 SUPERFAMILY SSF53850 1 214 4.72E-72 T 23-04-2016 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 Gene3D G3DSA:3.40.190.10 2 107 4.0E-40 T 23-04-2016 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 293 2.1E-15 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 PRINTS PR00151 Porphobilinogen deaminase signature 121 138 1.5E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 PRINTS PR00151 Porphobilinogen deaminase signature 73 92 1.5E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 PRINTS PR00151 Porphobilinogen deaminase signature 140 157 1.5E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 PRINTS PR00151 Porphobilinogen deaminase signature 42 62 1.5E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 1.5E-44 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 3 209 1.2E-68 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 PIRSF PIRSF001438 1 308 5.2E-108 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 PANTHER PTHR11557 1 308 2.4E-122 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS04420 6067f687781115096659fa237d427dd2 308 PANTHER PTHR11557:SF0 1 308 2.4E-122 T 23-04-2016 UPTC3659_RS02520 de4bbab90d49fe4c390bf70006d1dc9c 69 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 4 38 1.6E-11 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type UPTC3659_RS02520 de4bbab90d49fe4c390bf70006d1dc9c 69 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 4 35 1.3E-7 T 23-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 Gene3D G3DSA:1.10.8.60 330 439 7.2E-33 T 23-04-2016 UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 Gene3D G3DSA:1.10.8.10 110 175 1.8E-22 T 23-04-2016 UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 Gene3D G3DSA:1.10.8.10 208 238 1.8E-22 T 23-04-2016 UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 PANTHER PTHR11262 2 104 4.9E-177 T 23-04-2016 UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 PANTHER PTHR11262 213 439 4.9E-177 T 23-04-2016 UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 SMART SM01086 331 425 7.7E-19 T 23-04-2016 IPR019489 Clp ATPase, C-terminal UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 PANTHER PTHR11262:SF3 2 104 4.9E-177 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 PANTHER PTHR11262:SF3 213 439 4.9E-177 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 Gene3D G3DSA:3.40.50.300 240 327 2.5E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 Gene3D G3DSA:3.40.50.300 3 109 2.5E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 SMART SM00382 48 328 5.1E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 Pfam PF07724 AAA domain (Cdc48 subfamily) 51 115 4.3E-7 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 Pfam PF07724 AAA domain (Cdc48 subfamily) 199 324 5.1E-36 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 331 401 1.7E-5 T 23-04-2016 IPR019489 Clp ATPase, C-terminal UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 SUPERFAMILY SSF52540 2 430 8.22E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04375 98642f02811402755efc06d391eb0ddc 439 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 3 439 9.2E-187 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Gene3D G3DSA:2.40.50.140 110 182 2.9E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SUPERFAMILY SSF50249 270 361 4.58E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SUPERFAMILY SSF50249 17 117 6.45E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SUPERFAMILY SSF50249 119 186 5.09E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Gene3D G3DSA:2.40.50.140 203 283 1.4E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 PANTHER PTHR10724 12 518 2.2E-134 T 23-04-2016 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Pfam PF00575 S1 RNA binding domain 200 270 1.2E-18 T 23-04-2016 IPR003029 S1 domain GO:0003676 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Pfam PF00575 S1 RNA binding domain 455 524 8.2E-12 T 23-04-2016 IPR003029 S1 domain GO:0003676 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Pfam PF00575 S1 RNA binding domain 285 357 2.7E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Pfam PF00575 S1 RNA binding domain 120 181 2.2E-4 T 23-04-2016 IPR003029 S1 domain GO:0003676 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Pfam PF00575 S1 RNA binding domain 371 442 5.6E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 PANTHER PTHR10724:SF6 12 518 2.2E-134 T 23-04-2016 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SUPERFAMILY SSF50249 454 549 6.64E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SMART SM00316 115 181 0.24 T 23-04-2016 IPR022967 RNA-binding domain, S1 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SMART SM00316 285 357 2.6E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SMART SM00316 200 270 4.2E-22 T 23-04-2016 IPR022967 RNA-binding domain, S1 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SMART SM00316 32 98 3.6E-5 T 23-04-2016 IPR022967 RNA-binding domain, S1 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SMART SM00316 372 442 3.8E-25 T 23-04-2016 IPR022967 RNA-binding domain, S1 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SMART SM00316 457 524 2.4E-18 T 23-04-2016 IPR022967 RNA-binding domain, S1 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Gene3D G3DSA:2.40.50.140 454 535 2.3E-17 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SUPERFAMILY SSF50249 372 457 1.58E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 PRINTS PR00681 Ribosomal protein S1 signature 52 66 4.5E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 PRINTS PR00681 Ribosomal protein S1 signature 300 319 4.5E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 PRINTS PR00681 Ribosomal protein S1 signature 222 243 4.5E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 PRINTS PR00681 Ribosomal protein S1 signature 340 358 4.5E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 PRINTS PR00681 Ribosomal protein S1 signature 165 185 4.5E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 PRINTS PR00681 Ribosomal protein S1 signature 34 52 4.5E-30 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 SUPERFAMILY SSF50249 202 281 1.31E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Gene3D G3DSA:2.40.50.140 18 101 5.5E-8 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Gene3D G3DSA:2.40.50.140 362 446 2.8E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07130 e75b22df801d2f34bc87c9a375276245 555 Gene3D G3DSA:2.40.50.140 284 358 2.5E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07495 1e3cd29f37701abdee9518c769c30613 136 Gene3D G3DSA:1.20.120.160 16 113 8.1E-5 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 UPTC3659_RS07495 1e3cd29f37701abdee9518c769c30613 136 SUPERFAMILY SSF47226 14 120 3.57E-10 T 23-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 UPTC3659_RS05840 70e6553601ae264b56bdd5921dddc1b5 646 PANTHER PTHR23355 164 584 9.4E-104 T 23-04-2016 UPTC3659_RS05840 70e6553601ae264b56bdd5921dddc1b5 646 Pfam PF00773 RNB domain 215 526 1.1E-90 T 23-04-2016 UPTC3659_RS05840 70e6553601ae264b56bdd5921dddc1b5 646 ProSitePatterns PS01175 Ribonuclease II family signature. 496 520 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site UPTC3659_RS05840 70e6553601ae264b56bdd5921dddc1b5 646 SUPERFAMILY SSF50249 181 572 6.28E-106 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS05840 70e6553601ae264b56bdd5921dddc1b5 646 SMART SM00955 215 529 7.4E-125 T 23-04-2016 UPTC3659_RS05840 70e6553601ae264b56bdd5921dddc1b5 646 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 49 605 1.7E-111 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 UPTC3659_RS05840 70e6553601ae264b56bdd5921dddc1b5 646 PANTHER PTHR23355:SF9 164 584 9.4E-104 T 23-04-2016 UPTC3659_RS08490 2d531994e1d24d3509833e7891cfc77d 392 Gene3D G3DSA:3.90.1150.10 250 373 1.6E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS08490 2d531994e1d24d3509833e7891cfc77d 392 SUPERFAMILY SSF53383 3 377 3.46E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS08490 2d531994e1d24d3509833e7891cfc77d 392 PANTHER PTHR11601:SF45 3 385 1.2E-147 T 23-04-2016 UPTC3659_RS08490 2d531994e1d24d3509833e7891cfc77d 392 PANTHER PTHR11601 3 385 1.2E-147 T 23-04-2016 UPTC3659_RS08490 2d531994e1d24d3509833e7891cfc77d 392 TIGRFAM TIGR03403 nifS_epsilon: cysteine desulfurase, NifS family 3 384 5.1E-214 T 23-04-2016 IPR017773 Cysteine desulfurase NifS, proteobacteria GO:0006534|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 UPTC3659_RS08490 2d531994e1d24d3509833e7891cfc77d 392 Pfam PF00266 Aminotransferase class-V 3 366 3.5E-76 T 23-04-2016 IPR000192 Aminotransferase class V domain UPTC3659_RS08490 2d531994e1d24d3509833e7891cfc77d 392 Gene3D G3DSA:3.40.640.10 15 249 3.8E-77 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS08490 2d531994e1d24d3509833e7891cfc77d 392 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 195 214 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site UPTC3659_RS08490 2d531994e1d24d3509833e7891cfc77d 392 PIRSF PIRSF005572 1 382 1.8E-117 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 UPTC3659_RS04350 e75c3c2a3a83ff112d45a6a8f896be2f 135 SUPERFAMILY SSF52540 18 103 7.5E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04350 e75c3c2a3a83ff112d45a6a8f896be2f 135 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 112 4.2E-24 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 UPTC3659_RS04350 e75c3c2a3a83ff112d45a6a8f896be2f 135 Gene3D G3DSA:3.40.50.300 15 131 3.3E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04350 e75c3c2a3a83ff112d45a6a8f896be2f 135 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 13 114 1.3E-28 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 UPTC3659_RS04350 e75c3c2a3a83ff112d45a6a8f896be2f 135 PANTHER PTHR33540 1 133 1.5E-14 T 23-04-2016 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 284 1.7E-11 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 SUPERFAMILY SSF52151 4 120 2.41E-42 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 SUPERFAMILY SSF52151 189 303 2.41E-42 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 PANTHER PTHR10982 1 284 4.5E-69 T 23-04-2016 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 SUPERFAMILY SSF55048 128 192 1.83E-12 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 Gene3D G3DSA:3.40.366.10 196 291 1.2E-42 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 Gene3D G3DSA:3.40.366.10 3 120 1.2E-42 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 286 1.5E-80 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 PIRSF PIRSF000446 1 306 1.3E-69 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 Gene3D G3DSA:3.30.70.250 127 195 4.1E-20 T 23-04-2016 UPTC3659_RS01100 d01a4f18a55d154065e1cf07760832a1 306 Pfam PF00698 Acyl transferase domain 5 221 9.5E-20 T 23-04-2016 IPR014043 Acyl transferase UPTC3659_RS05835 0c76fc83f9e8e70a44e555ba6f282f02 340 PANTHER PTHR21371 4 339 5.0E-183 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS05835 0c76fc83f9e8e70a44e555ba6f282f02 340 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 330 45.188 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS05835 0c76fc83f9e8e70a44e555ba6f282f02 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 9.4E-135 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS05835 0c76fc83f9e8e70a44e555ba6f282f02 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 185 328 9.7E-64 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS05835 0c76fc83f9e8e70a44e555ba6f282f02 340 SUPERFAMILY SSF51735 4 184 7.11E-73 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS05835 0c76fc83f9e8e70a44e555ba6f282f02 340 SUPERFAMILY SSF48179 185 334 1.19E-70 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 UPTC3659_RS05835 0c76fc83f9e8e70a44e555ba6f282f02 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 179 7.8E-76 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS05835 0c76fc83f9e8e70a44e555ba6f282f02 340 Gene3D G3DSA:3.50.50.60 5 40 3.1E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS05835 0c76fc83f9e8e70a44e555ba6f282f02 340 Gene3D G3DSA:1.10.1040.10 41 327 2.7E-112 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UPTC3659_RS04470 d2e9835c10a534b3f10fef92c7da98cd 124 SUPERFAMILY SSF46955 10 98 5.49E-20 T 23-04-2016 IPR009061 Putative DNA-binding domain UPTC3659_RS04470 d2e9835c10a534b3f10fef92c7da98cd 124 PANTHER PTHR30204:SF8 2 91 1.1E-28 T 23-04-2016 UPTC3659_RS04470 d2e9835c10a534b3f10fef92c7da98cd 124 ProSitePatterns PS00552 MerR-type HTH domain signature. 13 35 - T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UPTC3659_RS04470 d2e9835c10a534b3f10fef92c7da98cd 124 PANTHER PTHR30204 2 91 1.1E-28 T 23-04-2016 UPTC3659_RS04470 d2e9835c10a534b3f10fef92c7da98cd 124 SMART SM00422 10 79 8.9E-27 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UPTC3659_RS04470 d2e9835c10a534b3f10fef92c7da98cd 124 Pfam PF13411 MerR HTH family regulatory protein 10 77 1.2E-16 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UPTC3659_RS04470 d2e9835c10a534b3f10fef92c7da98cd 124 Gene3D G3DSA:1.10.1660.10 10 98 8.7E-22 T 23-04-2016 UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 SMART SM00825 Beta-ketoacyl synthase 4 403 2.5E-11 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 Gene3D G3DSA:3.40.47.10 2 254 2.3E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 Gene3D G3DSA:3.40.47.10 261 403 8.4E-55 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 401 3.4E-180 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 2.0E-29 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 SUPERFAMILY SSF53901 2 249 3.51E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 1.8E-52 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 PANTHER PTHR11712 2 402 3.1E-177 T 23-04-2016 UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 PIRSF PIRSF000447 1 404 2.6E-164 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 UPTC3659_RS01530 3fe7e477d60efd1fddf1c5cdddaa18fc 404 SUPERFAMILY SSF53901 212 402 1.58E-63 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS03820 e75dcbd2d6e8cbefbede571c38e9eb1f 135 Gene3D G3DSA:3.40.50.270 1 129 2.9E-28 T 23-04-2016 UPTC3659_RS03820 e75dcbd2d6e8cbefbede571c38e9eb1f 135 SUPERFAMILY SSF52788 2 128 1.13E-23 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily UPTC3659_RS03820 e75dcbd2d6e8cbefbede571c38e9eb1f 135 SMART SM00226 1 129 1.4E-17 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily UPTC3659_RS03820 e75dcbd2d6e8cbefbede571c38e9eb1f 135 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 127 1.9E-18 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily UPTC3659_RS03820 e75dcbd2d6e8cbefbede571c38e9eb1f 135 PANTHER PTHR11717 1 132 2.6E-21 T 23-04-2016 UPTC3659_RS03820 e75dcbd2d6e8cbefbede571c38e9eb1f 135 PANTHER PTHR11717:SF18 1 132 2.6E-21 T 23-04-2016 UPTC3659_RS06845 3ba4007b849b509aa3986d62d92218e1 377 SMART SM00876 264 368 4.4E-28 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS06845 3ba4007b849b509aa3986d62d92218e1 377 Gene3D G3DSA:3.20.20.70 44 367 9.2E-39 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS06845 3ba4007b849b509aa3986d62d92218e1 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 264 367 2.9E-25 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS06845 3ba4007b849b509aa3986d62d92218e1 377 Pfam PF04055 Radical SAM superfamily 89 229 3.5E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS06845 3ba4007b849b509aa3986d62d92218e1 377 SUPERFAMILY SSF102114 44 365 3.27E-42 T 23-04-2016 UPTC3659_RS06845 3ba4007b849b509aa3986d62d92218e1 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 15 375 3.7E-156 T 23-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 UPTC3659_RS06845 3ba4007b849b509aa3986d62d92218e1 377 PANTHER PTHR22976 2 375 1.3E-142 T 23-04-2016 UPTC3659_RS06845 3ba4007b849b509aa3986d62d92218e1 377 PANTHER PTHR22976:SF17 2 375 1.3E-142 T 23-04-2016 UPTC3659_RS05820 2ad0a4f80c0490394c8e5c42b6d65196 128 Gene3D G3DSA:3.30.420.140 2 124 6.6E-30 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 UPTC3659_RS05820 2ad0a4f80c0490394c8e5c42b6d65196 128 Pfam PF03652 Holliday junction resolvase 1 124 8.0E-28 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 UPTC3659_RS05820 2ad0a4f80c0490394c8e5c42b6d65196 128 PANTHER PTHR33317 1 124 9.6E-19 T 23-04-2016 UPTC3659_RS05820 2ad0a4f80c0490394c8e5c42b6d65196 128 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 128 16.62 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 UPTC3659_RS05820 2ad0a4f80c0490394c8e5c42b6d65196 128 SMART SM00732 1 97 7.1E-24 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 UPTC3659_RS05820 2ad0a4f80c0490394c8e5c42b6d65196 128 SUPERFAMILY SSF53098 2 124 5.77E-25 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS05820 2ad0a4f80c0490394c8e5c42b6d65196 128 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 125 7.5E-18 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 PANTHER PTHR23132 4 302 3.7E-40 T 23-04-2016 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 Gene3D G3DSA:3.30.470.20 119 144 3.5E-21 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 Gene3D G3DSA:3.30.470.20 208 310 3.5E-21 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 323 6.6E-90 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 Gene3D G3DSA:3.30.1490.20 157 204 7.0E-18 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 95 106 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 SUPERFAMILY SSF52440 3 127 8.73E-26 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 Pfam PF01820 D-ala D-ala ligase N-terminus 4 117 2.9E-17 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 275 302 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 333 27.146 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 Pfam PF07478 D-ala D-ala ligase C-terminus 138 308 1.3E-31 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 Gene3D G3DSA:3.40.50.20 4 117 2.6E-19 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS03655 f04aed2c31856579488c39076aef14fd 346 SUPERFAMILY SSF56059 128 307 3.36E-33 T 23-04-2016 UPTC3659_RS07695 c2f58f1cc945a47e9874fb51f5cb7422 224 SUPERFAMILY SSF53335 26 221 8.36E-14 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07695 c2f58f1cc945a47e9874fb51f5cb7422 224 Pfam PF13649 Methyltransferase domain 33 120 2.4E-7 T 23-04-2016 UPTC3659_RS07695 c2f58f1cc945a47e9874fb51f5cb7422 224 Gene3D G3DSA:3.40.50.150 21 200 1.1E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 Gene3D G3DSA:3.40.50.720 139 261 4.7E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 PANTHER PTHR10025 2 282 2.0E-159 T 23-04-2016 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 257 265 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 SUPERFAMILY SSF51735 120 277 6.41E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 SUPERFAMILY SSF53223 2 119 2.97E-40 T 23-04-2016 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 121 278 1.3E-70 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 118 3.3E-41 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 280 39.748 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 31 53 3.5E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 236 252 3.5E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 107 128 3.5E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 253 271 3.5E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 3.5E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 231 3.5E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 72 99 3.5E-85 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 Gene3D G3DSA:3.40.192.10 5 138 5.0E-50 T 23-04-2016 UPTC3659_RS03100 cbaddeeed6a31afe52a37d863f79ee7a 282 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 73 98 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 UPTC3659_RS02120 e21c2fb9a741db08dc06dd46c0dc2fcf 273 SUPERFAMILY SSF56042 129 242 3.35E-11 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS02120 e21c2fb9a741db08dc06dd46c0dc2fcf 273 SUPERFAMILY SSF55326 9 122 9.07E-25 T 23-04-2016 UPTC3659_RS02120 e21c2fb9a741db08dc06dd46c0dc2fcf 273 Gene3D G3DSA:3.90.650.10 131 255 1.3E-14 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS02120 e21c2fb9a741db08dc06dd46c0dc2fcf 273 PANTHER PTHR30270 17 212 1.3E-43 T 23-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 UPTC3659_RS02120 e21c2fb9a741db08dc06dd46c0dc2fcf 273 Pfam PF00586 AIR synthase related protein, N-terminal domain 18 123 4.6E-18 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS02120 e21c2fb9a741db08dc06dd46c0dc2fcf 273 Gene3D G3DSA:3.30.1330.10 13 127 6.4E-28 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS02120 e21c2fb9a741db08dc06dd46c0dc2fcf 273 PANTHER PTHR30270:SF0 17 212 1.3E-43 T 23-04-2016 UPTC3659_RS03035 399085561bd1809c1e13554e4cb8db02 266 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 173 179 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 UPTC3659_RS03035 399085561bd1809c1e13554e4cb8db02 266 Gene3D G3DSA:3.40.50.150 80 262 6.4E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03035 399085561bd1809c1e13554e4cb8db02 266 PANTHER PTHR18895 21 266 3.4E-51 T 23-04-2016 UPTC3659_RS03035 399085561bd1809c1e13554e4cb8db02 266 SUPERFAMILY SSF53335 14 253 4.7E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03035 399085561bd1809c1e13554e4cb8db02 266 PANTHER PTHR18895:SF64 21 266 3.4E-51 T 23-04-2016 UPTC3659_RS03035 399085561bd1809c1e13554e4cb8db02 266 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 262 1.2E-50 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 UPTC3659_RS03035 399085561bd1809c1e13554e4cb8db02 266 Gene3D G3DSA:1.10.8.10 4 77 2.1E-9 T 23-04-2016 UPTC3659_RS03035 399085561bd1809c1e13554e4cb8db02 266 Pfam PF05175 Methyltransferase small domain 97 181 1.9E-11 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 UPTC3659_RS04310 db963f3ffcbefa86b00d4e23aac1bc68 194 SUPERFAMILY SSF52540 2 193 1.45E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04310 db963f3ffcbefa86b00d4e23aac1bc68 194 PANTHER PTHR10344:SF0 1 194 2.4E-24 T 23-04-2016 UPTC3659_RS04310 db963f3ffcbefa86b00d4e23aac1bc68 194 Hamap MF_00165 Thymidylate kinase [tmk]. 1 192 18.175 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 UPTC3659_RS04310 db963f3ffcbefa86b00d4e23aac1bc68 194 PANTHER PTHR10344 1 194 2.4E-24 T 23-04-2016 UPTC3659_RS04310 db963f3ffcbefa86b00d4e23aac1bc68 194 Gene3D G3DSA:3.40.50.300 2 193 1.1E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04310 db963f3ffcbefa86b00d4e23aac1bc68 194 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 188 1.5E-36 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 UPTC3659_RS04310 db963f3ffcbefa86b00d4e23aac1bc68 194 Pfam PF02223 Thymidylate kinase 5 188 5.1E-31 T 23-04-2016 UPTC3659_RS05320 1dcecae1ebd3761e81f7bae7af24b014 214 Gene3D G3DSA:1.10.3920.10 184 214 1.0E-5 T 23-04-2016 IPR028983 PA2201-like, C-terminal UPTC3659_RS05320 1dcecae1ebd3761e81f7bae7af24b014 214 Pfam PF08929 Domain of unknown function (DUF1911) 185 213 1.4E-5 T 23-04-2016 IPR015025 Domain of unknown function DUF1911 UPTC3659_RS05320 1dcecae1ebd3761e81f7bae7af24b014 214 SUPERFAMILY SSF140731 86 214 1.31E-7 T 23-04-2016 IPR028983 PA2201-like, C-terminal UPTC3659_RS04575 44bc7522bf25b833a173eed7fcfaaf08 246 Gene3D G3DSA:3.40.50.300 5 240 7.9E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04575 44bc7522bf25b833a173eed7fcfaaf08 246 PANTHER PTHR24220 4 243 1.8E-116 T 23-04-2016 UPTC3659_RS04575 44bc7522bf25b833a173eed7fcfaaf08 246 PANTHER PTHR24220:SF585 4 243 1.8E-116 T 23-04-2016 UPTC3659_RS04575 44bc7522bf25b833a173eed7fcfaaf08 246 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS04575 44bc7522bf25b833a173eed7fcfaaf08 246 SUPERFAMILY SSF52540 5 233 1.69E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04575 44bc7522bf25b833a173eed7fcfaaf08 246 Pfam PF00005 ABC transporter 20 171 3.1E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS04575 44bc7522bf25b833a173eed7fcfaaf08 246 SMART SM00382 27 222 3.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS04575 44bc7522bf25b833a173eed7fcfaaf08 246 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 246 1.2E-107 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 UPTC3659_RS01060 45216a2a88d59094d56d4ded39c12ad2 130 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 16 81 1.0E-26 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01060 45216a2a88d59094d56d4ded39c12ad2 130 PANTHER PTHR13822 1 117 1.3E-19 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01060 45216a2a88d59094d56d4ded39c12ad2 130 Gene3D G3DSA:2.60.15.10 5 87 8.9E-25 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01060 45216a2a88d59094d56d4ded39c12ad2 130 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 127 6.4E-36 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01060 45216a2a88d59094d56d4ded39c12ad2 130 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 84 2.3E-25 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01060 45216a2a88d59094d56d4ded39c12ad2 130 SUPERFAMILY SSF51344 4 86 7.19E-22 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01060 45216a2a88d59094d56d4ded39c12ad2 130 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 125 17.511 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 UPTC3659_RS01960 f6d9b4a6cb797ea17021f3fc2be31039 488 PANTHER PTHR10422 8 474 3.8E-165 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 UPTC3659_RS01960 f6d9b4a6cb797ea17021f3fc2be31039 488 Gene3D G3DSA:1.20.210.10 12 485 4.9E-71 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 UPTC3659_RS01960 f6d9b4a6cb797ea17021f3fc2be31039 488 PANTHER PTHR10422:SF21 8 474 3.8E-165 T 23-04-2016 UPTC3659_RS01960 f6d9b4a6cb797ea17021f3fc2be31039 488 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 8 485 8.1E-215 T 23-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 UPTC3659_RS01960 f6d9b4a6cb797ea17021f3fc2be31039 488 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 215 270 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 UPTC3659_RS01960 f6d9b4a6cb797ea17021f3fc2be31039 488 SUPERFAMILY SSF81442 9 485 4.71E-114 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 UPTC3659_RS01960 f6d9b4a6cb797ea17021f3fc2be31039 488 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 13 454 1.6E-106 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 UPTC3659_RS07630 b2d13f1395fa9776b7e351d7aaf22818 335 PANTHER PTHR10366 6 272 4.2E-117 T 23-04-2016 UPTC3659_RS07630 b2d13f1395fa9776b7e351d7aaf22818 335 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 3.6E-106 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain UPTC3659_RS07630 b2d13f1395fa9776b7e351d7aaf22818 335 SUPERFAMILY SSF51735 1 272 5.29E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07630 b2d13f1395fa9776b7e351d7aaf22818 335 Gene3D G3DSA:3.40.50.720 6 241 7.7E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07630 b2d13f1395fa9776b7e351d7aaf22818 335 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 327 1.3E-174 T 23-04-2016 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00010+4.2.1.11|KEGG: 00520+4.2.1.115|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6143|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 UPTC3659_RS07630 b2d13f1395fa9776b7e351d7aaf22818 335 PANTHER PTHR10366:SF360 6 272 4.2E-117 T 23-04-2016 UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 PANTHER PTHR10093:SF1 6 205 2.0E-80 T 23-04-2016 UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 Pfam PF04324 BFD-like [2Fe-2S] binding domain 159 201 3.7E-11 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 257 323 3.0E-23 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 PIRSF PIRSF000375 12 323 3.9E-110 T 23-04-2016 IPR016217 Nitrogen fixation, NifU UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 SUPERFAMILY SSF82649 14 157 8.63E-38 T 23-04-2016 UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 SUPERFAMILY SSF117916 240 323 1.29E-18 T 23-04-2016 UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 Pfam PF01592 NifU-like N terminal domain 14 150 7.5E-48 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 PANTHER PTHR10093 6 205 2.0E-80 T 23-04-2016 UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 Pfam PF01106 NifU-like domain 250 321 2.3E-20 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 UPTC3659_RS08495 3e954525e42d7ac081a002485e4a21eb 323 Gene3D G3DSA:3.90.1010.10 14 157 3.4E-38 T 23-04-2016 UPTC3659_RS03525 d00d84a996dbc97b670b55138e45eed6 404 SUPERFAMILY SSF49265 224 392 1.64E-6 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 UPTC3659_RS03525 d00d84a996dbc97b670b55138e45eed6 404 Gene3D G3DSA:2.60.40.10 328 403 1.5E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold UPTC3659_RS03525 d00d84a996dbc97b670b55138e45eed6 404 Gene3D G3DSA:2.60.40.10 44 115 2.3E-13 T 23-04-2016 IPR013783 Immunoglobulin-like fold UPTC3659_RS03525 d00d84a996dbc97b670b55138e45eed6 404 Gene3D G3DSA:2.60.40.10 229 307 5.4E-7 T 23-04-2016 IPR013783 Immunoglobulin-like fold UPTC3659_RS03525 d00d84a996dbc97b670b55138e45eed6 404 Gene3D G3DSA:2.60.40.10 142 226 1.7E-8 T 23-04-2016 IPR013783 Immunoglobulin-like fold UPTC3659_RS03525 d00d84a996dbc97b670b55138e45eed6 404 SUPERFAMILY SSF49265 47 223 6.09E-15 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 UPTC3659_RS03525 d00d84a996dbc97b670b55138e45eed6 404 SMART SM00060 129 208 11.0 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 UPTC3659_RS03525 d00d84a996dbc97b670b55138e45eed6 404 SMART SM00060 34 114 0.39 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 UPTC3659_RS03525 d00d84a996dbc97b670b55138e45eed6 404 SMART SM00060 225 393 12.0 T 23-04-2016 IPR003961 Fibronectin type III GO:0005515 UPTC3659_RS01750 331bce94c6996d1818fd186f317038d4 259 SUPERFAMILY SSF81343 2 241 7.85E-75 T 23-04-2016 UPTC3659_RS01750 331bce94c6996d1818fd186f317038d4 259 PIRSF PIRSF000177 1 257 2.2E-121 T 23-04-2016 IPR004224 Fumarate reductase respiratory complex, transmembrane subunit GO:0006099 UPTC3659_RS01750 331bce94c6996d1818fd186f317038d4 259 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 113 221 3.2E-15 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 UPTC3659_RS01750 331bce94c6996d1818fd186f317038d4 259 Gene3D G3DSA:1.20.950.10 2 245 4.8E-91 T 23-04-2016 UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 560 4.9E-229 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 PANTHER PTHR18968 3 560 2.7E-278 T 23-04-2016 UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 Gene3D G3DSA:3.40.50.970 361 561 3.6E-68 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 SUPERFAMILY SSF52467 186 358 8.02E-59 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 329 4.2E-41 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 SUPERFAMILY SSF52518 359 560 6.82E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 Gene3D G3DSA:3.40.50.970 2 178 2.6E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 SUPERFAMILY SSF52518 3 182 1.63E-60 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 PANTHER PTHR18968:SF116 3 560 2.7E-278 T 23-04-2016 UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 4.5E-56 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 Gene3D G3DSA:3.40.50.1220 192 357 1.8E-57 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain UPTC3659_RS04650 5c8a8222260ae0be6d3890c05687b94e 569 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 389 537 1.4E-46 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UPTC3659_RS06385 d83a9ddda7464bd0d119daff42da4032 251 Pfam PF00288 GHMP kinases N terminal domain 86 132 1.5E-7 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 UPTC3659_RS06385 d83a9ddda7464bd0d119daff42da4032 251 Gene3D G3DSA:3.30.230.10 2 158 5.9E-27 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS06385 d83a9ddda7464bd0d119daff42da4032 251 PIRSF PIRSF010376 1 251 3.8E-51 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS06385 d83a9ddda7464bd0d119daff42da4032 251 SUPERFAMILY SSF54211 2 156 4.02E-25 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS06385 d83a9ddda7464bd0d119daff42da4032 251 Gene3D G3DSA:3.30.70.890 169 248 4.8E-5 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain UPTC3659_RS06385 d83a9ddda7464bd0d119daff42da4032 251 PANTHER PTHR20861:SF2 1 248 5.5E-26 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS06385 d83a9ddda7464bd0d119daff42da4032 251 SUPERFAMILY SSF55060 168 248 1.51E-8 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain UPTC3659_RS06385 d83a9ddda7464bd0d119daff42da4032 251 PANTHER PTHR20861 1 248 5.5E-26 T 23-04-2016 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 Pfam PF00152 tRNA synthetases class II (D, K and N) 154 490 9.6E-82 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 9 494 42.239 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 Pfam PF01336 OB-fold nucleic acid binding domain 60 135 3.1E-11 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 Gene3D G3DSA:3.30.930.10 147 489 1.8E-114 T 23-04-2016 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 PANTHER PTHR22594 4 497 7.8E-224 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 234 247 9.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 252 269 9.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 189 199 9.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 375 391 9.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 PRINTS PR00982 Lysyl-tRNA synthetase signature 205 221 9.7E-38 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 PANTHER PTHR22594:SF4 4 497 7.8E-224 T 23-04-2016 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 SUPERFAMILY SSF55681 152 491 2.59E-120 T 23-04-2016 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 SUPERFAMILY SSF50249 6 145 1.15E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 7 493 5.2E-193 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 UPTC3659_RS02595 61881d9ff68c1365ff49878002778b80 500 Gene3D G3DSA:2.40.50.140 7 145 1.2E-38 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 12 341 1.2E-121 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 Pfam PF14841 FliG middle domain 126 199 1.6E-27 T 23-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PANTHER PTHR30534 2 342 1.6E-78 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 Pfam PF01706 FliG C-terminal domain 229 333 1.2E-35 T 23-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 SUPERFAMILY SSF48029 126 334 6.41E-60 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PANTHER PTHR30534:SF0 2 342 1.6E-78 T 23-04-2016 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 SUPERFAMILY SSF48029 17 111 2.59E-17 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 Pfam PF14842 FliG N-terminal domain 15 115 2.3E-27 T 23-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 Gene3D G3DSA:1.10.220.30 83 198 5.1E-30 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 Gene3D G3DSA:1.10.220.30 205 339 1.6E-35 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 125 148 1.1E-54 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 282 308 1.1E-54 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 258 278 1.1E-54 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 236 256 1.1E-54 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 44 70 1.1E-54 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 205 230 1.1E-54 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PRINTS PR00954 Flagellar motor switch protein FliG signature 15 31 1.1E-54 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 PIRSF PIRSF003161 9 342 3.2E-113 T 23-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UPTC3659_RS07850 47f7b3c745c4f9cd4d0b001f197202af 342 Gene3D G3DSA:1.10.220.30 18 81 3.0E-11 T 23-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical UPTC3659_RS08430 5868bda5f5de1b02bd4b3905785dee35 446 Pfam PF02646 RmuC family 153 434 8.3E-65 T 23-04-2016 IPR003798 DNA recombination RmuC UPTC3659_RS08430 5868bda5f5de1b02bd4b3905785dee35 446 PANTHER PTHR30563 61 436 2.1E-51 T 23-04-2016 UPTC3659_RS05505 df9c5ca1bf8ddf3ebcca233e4670c697 575 PIRSF PIRSF028304 1 575 6.5E-121 T 23-04-2016 IPR010272 Type VI secretion system, TssF-like UPTC3659_RS05505 df9c5ca1bf8ddf3ebcca233e4670c697 575 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 7 572 8.4E-128 T 23-04-2016 IPR010272 Type VI secretion system, TssF-like UPTC3659_RS05505 df9c5ca1bf8ddf3ebcca233e4670c697 575 PANTHER PTHR35370 4 575 1.7E-74 T 23-04-2016 UPTC3659_RS05505 df9c5ca1bf8ddf3ebcca233e4670c697 575 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 7 574 1.1E-128 T 23-04-2016 IPR010272 Type VI secretion system, TssF-like UPTC3659_RS05505 df9c5ca1bf8ddf3ebcca233e4670c697 575 PANTHER PTHR35370:SF4 4 575 1.7E-74 T 23-04-2016 UPTC3659_RS04175 866147e283a3a7045af7718e79933f0f 221 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 2.8E-77 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 UPTC3659_RS04175 866147e283a3a7045af7718e79933f0f 221 PANTHER PTHR11587:SF3 1 221 8.0E-79 T 23-04-2016 UPTC3659_RS04175 866147e283a3a7045af7718e79933f0f 221 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 48.544 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 UPTC3659_RS04175 866147e283a3a7045af7718e79933f0f 221 PANTHER PTHR11587 1 221 8.0E-79 T 23-04-2016 UPTC3659_RS04175 866147e283a3a7045af7718e79933f0f 221 SUPERFAMILY SSF52402 1 220 3.31E-59 T 23-04-2016 UPTC3659_RS04175 866147e283a3a7045af7718e79933f0f 221 Gene3D G3DSA:3.40.50.620 1 220 6.8E-89 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS04175 866147e283a3a7045af7718e79933f0f 221 PIRSF PIRSF006293 1 221 4.2E-81 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 UPTC3659_RS04175 866147e283a3a7045af7718e79933f0f 221 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 2.7E-60 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 UPTC3659_RS05690 eadc423a7b099fbf644bfd98391948af 416 SUPERFAMILY SSF103473 8 413 4.71E-48 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS05690 eadc423a7b099fbf644bfd98391948af 416 Pfam PF07690 Major Facilitator Superfamily 41 369 3.0E-25 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS05690 eadc423a7b099fbf644bfd98391948af 416 Gene3D G3DSA:1.20.1250.20 16 208 1.4E-21 T 23-04-2016 UPTC3659_RS05690 eadc423a7b099fbf644bfd98391948af 416 Gene3D G3DSA:1.20.1250.20 213 414 3.9E-16 T 23-04-2016 UPTC3659_RS05690 eadc423a7b099fbf644bfd98391948af 416 PANTHER PTHR11662 38 413 9.2E-16 T 23-04-2016 UPTC3659_RS02870 9ca99c579b2d9d7e89fcb19548d8903f 267 PANTHER PTHR21057 2 267 4.0E-134 T 23-04-2016 UPTC3659_RS02870 9ca99c579b2d9d7e89fcb19548d8903f 267 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 1 267 48.802 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 UPTC3659_RS02870 9ca99c579b2d9d7e89fcb19548d8903f 267 Pfam PF00793 DAHP synthetase I family 2 260 5.5E-63 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 UPTC3659_RS02870 9ca99c579b2d9d7e89fcb19548d8903f 267 Gene3D G3DSA:3.20.20.70 2 266 7.0E-116 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS02870 9ca99c579b2d9d7e89fcb19548d8903f 267 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 2 266 3.5E-117 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 UPTC3659_RS02870 9ca99c579b2d9d7e89fcb19548d8903f 267 PANTHER PTHR21057:SF2 2 267 4.0E-134 T 23-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 UPTC3659_RS02870 9ca99c579b2d9d7e89fcb19548d8903f 267 SUPERFAMILY SSF51569 3 266 1.47E-89 T 23-04-2016 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 166 177 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 PANTHER PTHR30559 1 354 7.9E-221 T 23-04-2016 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 PANTHER PTHR30559:SF0 1 354 7.9E-221 T 23-04-2016 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 353 2.4E-164 T 23-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 95 106 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 Gene3D G3DSA:3.20.20.70 10 353 5.2E-120 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 352 9.7E-88 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 SUPERFAMILY SSF51569 1 352 4.54E-126 T 23-04-2016 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 353 2.5E-107 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UPTC3659_RS05640 d712a3b53f2604225a17d0269c9bb613 354 PIRSF PIRSF001359 12 354 6.3E-90 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 PANTHER PTHR11070 245 652 1.4E-68 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 PANTHER PTHR11070 684 718 1.4E-68 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 PANTHER PTHR11070 100 184 1.4E-68 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 PANTHER PTHR11070 9 70 1.4E-68 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 Gene3D G3DSA:3.40.50.300 284 397 5.3E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 Gene3D G3DSA:3.40.50.300 9 57 5.3E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 Gene3D G3DSA:3.40.50.300 108 167 5.3E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 Gene3D G3DSA:3.40.50.300 403 509 1.3E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 Gene3D G3DSA:3.40.50.300 605 721 1.3E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 394 9.8E-49 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 Pfam PF13361 UvrD-like helicase C-terminal domain 401 554 5.5E-9 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 Pfam PF13361 UvrD-like helicase C-terminal domain 603 708 7.1E-15 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 SUPERFAMILY SSF52540 685 711 1.55E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 SUPERFAMILY SSF52540 6 61 1.55E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 SUPERFAMILY SSF52540 274 651 1.55E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 SUPERFAMILY SSF52540 100 175 1.55E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02000 ca91e14c796312900cab7729b3244492 914 SUPERFAMILY SSF52980 770 896 7.51E-6 T 23-04-2016 IPR011335 Restriction endonuclease type II-like UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 SUPERFAMILY SSF51905 244 485 1.1E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 PANTHER PTHR13847:SF182 550 611 1.4E-23 T 23-04-2016 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 PANTHER PTHR13847:SF182 205 532 1.4E-23 T 23-04-2016 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 245 609 1.4E-82 T 23-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 Gene3D G3DSA:3.40.50.150 10 224 1.2E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 PANTHER PTHR13847 550 611 1.4E-23 T 23-04-2016 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 PANTHER PTHR13847 205 532 1.4E-23 T 23-04-2016 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 Gene3D G3DSA:3.50.50.60 352 433 5.0E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 Gene3D G3DSA:3.50.50.60 244 315 5.0E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 Gene3D G3DSA:3.50.50.60 518 606 5.0E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 103 221 1.5E-34 T 23-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 UPTC3659_RS03580 1895f75a2e3d50efba7f47f8d65e189c 611 Pfam PF01266 FAD dependent oxidoreductase 245 580 2.2E-20 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS08685 ac9ef8580aa180b68f92a255e6e1335d 527 Gene3D G3DSA:1.10.3720.10 11 254 4.5E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS08685 ac9ef8580aa180b68f92a255e6e1335d 527 Gene3D G3DSA:1.10.3720.10 280 525 8.0E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS08685 ac9ef8580aa180b68f92a255e6e1335d 527 PANTHER PTHR30183:SF2 4 524 9.3E-98 T 23-04-2016 UPTC3659_RS08685 ac9ef8580aa180b68f92a255e6e1335d 527 PANTHER PTHR30183 4 524 9.3E-98 T 23-04-2016 UPTC3659_RS08685 ac9ef8580aa180b68f92a255e6e1335d 527 SUPERFAMILY SSF161098 273 519 3.18E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS08685 ac9ef8580aa180b68f92a255e6e1335d 527 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 248 6.8E-8 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS08685 ac9ef8580aa180b68f92a255e6e1335d 527 SUPERFAMILY SSF161098 6 248 3.05E-35 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS04060 cfd1a164fb410c1371cdc4c8458eb54d 122 PANTHER PTHR28259 4 122 3.2E-32 T 23-04-2016 UPTC3659_RS04060 cfd1a164fb410c1371cdc4c8458eb54d 122 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.724 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 UPTC3659_RS04060 cfd1a164fb410c1371cdc4c8458eb54d 122 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 1.8E-24 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 UPTC3659_RS04060 cfd1a164fb410c1371cdc4c8458eb54d 122 TIGRFAM TIGR00494 crcB: protein CrcB 6 121 7.9E-28 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 UPTC3659_RS07450 c04e4e3d4a0dbb9e3087c3a01edc219d 236 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 14 176 3.7E-46 T 23-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 UPTC3659_RS07450 c04e4e3d4a0dbb9e3087c3a01edc219d 236 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UPTC3659_RS07450 c04e4e3d4a0dbb9e3087c3a01edc219d 236 PANTHER PTHR15362 6 136 5.7E-30 T 23-04-2016 UPTC3659_RS07450 c04e4e3d4a0dbb9e3087c3a01edc219d 236 Pfam PF01066 CDP-alcohol phosphatidyltransferase 8 72 1.4E-15 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UPTC3659_RS01465 1a2f9c4c23338a6df7c1e6d083ee8793 156 SMART SM00248 45 74 0.016 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS01465 1a2f9c4c23338a6df7c1e6d083ee8793 156 SMART SM00248 12 41 320.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS01465 1a2f9c4c23338a6df7c1e6d083ee8793 156 SMART SM00248 78 107 0.055 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS01465 1a2f9c4c23338a6df7c1e6d083ee8793 156 SMART SM00248 111 141 2.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS01465 1a2f9c4c23338a6df7c1e6d083ee8793 156 Gene3D G3DSA:1.25.40.20 15 137 9.2E-30 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS01465 1a2f9c4c23338a6df7c1e6d083ee8793 156 PANTHER PTHR24188 21 131 8.4E-28 T 23-04-2016 UPTC3659_RS01465 1a2f9c4c23338a6df7c1e6d083ee8793 156 Pfam PF12796 Ankyrin repeats (3 copies) 23 108 1.0E-10 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS01465 1a2f9c4c23338a6df7c1e6d083ee8793 156 SUPERFAMILY SSF48403 15 136 1.29E-30 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS07760 6a064c91c31d74cf543aa0e4320ad8c8 329 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 329 137.09 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 UPTC3659_RS07760 6a064c91c31d74cf543aa0e4320ad8c8 329 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 4 325 1.2E-118 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 UPTC3659_RS07760 6a064c91c31d74cf543aa0e4320ad8c8 329 SUPERFAMILY SSF53659 1 326 7.81E-98 T 23-04-2016 UPTC3659_RS07760 6a064c91c31d74cf543aa0e4320ad8c8 329 PIRSF PIRSF002465 1 329 4.9E-124 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 UPTC3659_RS07760 6a064c91c31d74cf543aa0e4320ad8c8 329 PANTHER PTHR30100 1 328 3.1E-123 T 23-04-2016 UPTC3659_RS07760 6a064c91c31d74cf543aa0e4320ad8c8 329 Pfam PF02504 Fatty acid synthesis protein 4 317 6.7E-114 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 UPTC3659_RS07760 6a064c91c31d74cf543aa0e4320ad8c8 329 Gene3D G3DSA:3.40.718.10 1 325 8.4E-129 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 UPTC3659_RS07760 6a064c91c31d74cf543aa0e4320ad8c8 329 PANTHER PTHR30100:SF1 1 328 3.1E-123 T 23-04-2016 UPTC3659_RS05990 9557da6794b01b4f75defe5da4d5dd5a 387 SUPERFAMILY SSF52507 2 175 7.59E-46 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 UPTC3659_RS05990 9557da6794b01b4f75defe5da4d5dd5a 387 Gene3D G3DSA:3.40.50.10300 181 385 8.3E-51 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 UPTC3659_RS05990 9557da6794b01b4f75defe5da4d5dd5a 387 PANTHER PTHR14359 1 387 1.4E-95 T 23-04-2016 UPTC3659_RS05990 9557da6794b01b4f75defe5da4d5dd5a 387 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 183 358 3.8E-47 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 UPTC3659_RS05990 9557da6794b01b4f75defe5da4d5dd5a 387 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 383 2.1E-98 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 UPTC3659_RS05990 9557da6794b01b4f75defe5da4d5dd5a 387 Gene3D G3DSA:3.40.50.1950 2 180 8.7E-49 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 UPTC3659_RS05990 9557da6794b01b4f75defe5da4d5dd5a 387 SUPERFAMILY SSF102645 168 386 8.5E-51 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 UPTC3659_RS05990 9557da6794b01b4f75defe5da4d5dd5a 387 PANTHER PTHR14359:SF20 1 387 1.4E-95 T 23-04-2016 UPTC3659_RS05990 9557da6794b01b4f75defe5da4d5dd5a 387 Pfam PF02441 Flavoprotein 3 127 1.2E-27 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 Pfam PF07244 Surface antigen variable number repeat 342 413 1.8E-11 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 Pfam PF07244 Surface antigen variable number repeat 167 256 1.2E-4 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 Pfam PF07244 Surface antigen variable number repeat 259 336 4.9E-6 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 Pfam PF07244 Surface antigen variable number repeat 86 162 4.6E-8 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 Pfam PF07244 Surface antigen variable number repeat 18 83 1.1E-5 T 23-04-2016 IPR010827 Surface antigen variable number GO:0019867 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 Gene3D G3DSA:2.40.160.50 429 738 6.2E-16 T 23-04-2016 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 Pfam PF01103 Surface antigen 441 738 2.1E-58 T 23-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 18 738 2.3E-194 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 PIRSF PIRSF006076 2 738 1.2E-193 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 PANTHER PTHR12815 1 738 3.2E-131 T 23-04-2016 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 PANTHER PTHR12815:SF11 1 738 3.2E-131 T 23-04-2016 UPTC3659_RS01155 96f106de8fee8a4a4fcf9650da67be64 738 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 5 738 20.616 T 23-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 PANTHER PTHR30314:SF3 1 368 1.6E-146 T 23-04-2016 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 Pfam PF12327 FtsZ family, C-terminal domain 225 320 1.7E-23 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 SUPERFAMILY SSF52490 15 211 1.83E-62 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 SMART SM00864 16 208 4.0E-98 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 347 34.764 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 SUPERFAMILY SSF55307 210 325 2.06E-38 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 337 9.1E-119 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 PRINTS PR00423 Cell division protein FtsZ signature 101 121 6.4E-43 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 PRINTS PR00423 Cell division protein FtsZ signature 215 236 6.4E-43 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 PRINTS PR00423 Cell division protein FtsZ signature 129 150 6.4E-43 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 PRINTS PR00423 Cell division protein FtsZ signature 192 214 6.4E-43 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 176 2.0E-38 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 Gene3D G3DSA:3.30.1330.20 218 323 9.2E-40 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 PANTHER PTHR30314 1 368 1.6E-146 T 23-04-2016 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 Gene3D G3DSA:3.40.50.1440 15 217 4.4E-83 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 UPTC3659_RS07030 82052269adc6c7ba2859a6868f860254 368 SMART SM00865 210 328 2.0E-42 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 SUPERFAMILY SSF52172 2 180 3.42E-30 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 SMART SM00448 1 109 4.5E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 Pfam PF02954 Bacterial regulatory protein, Fis family 387 425 2.3E-7 T 23-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 Pfam PF00072 Response regulator receiver domain 4 110 1.6E-21 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 221 236 - T 23-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 PANTHER PTHR32071 1 428 1.0E-161 T 23-04-2016 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 SUPERFAMILY SSF46689 383 427 3.67E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 SUPERFAMILY SSF52540 134 376 2.54E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 Gene3D G3DSA:1.10.10.60 384 427 5.5E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 Gene3D G3DSA:1.10.8.60 308 383 5.2E-20 T 23-04-2016 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 Gene3D G3DSA:3.40.50.2300 2 124 5.6E-27 T 23-04-2016 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 Gene3D G3DSA:3.40.50.300 132 307 2.5E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 SMART SM00382 155 298 3.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 159 172 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UPTC3659_RS02805 95e4b998457f77ee44787dd7b63039ab 428 Pfam PF00158 Sigma-54 interaction domain 136 301 6.3E-69 T 23-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UPTC3659_RS03415 757362e3f2b136977d3ab6393aca3bc6 581 PANTHER PTHR11228 1 359 1.2E-15 T 23-04-2016 UPTC3659_RS03415 757362e3f2b136977d3ab6393aca3bc6 581 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 265 349 1.9E-8 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain UPTC3659_RS03415 757362e3f2b136977d3ab6393aca3bc6 581 Gene3D G3DSA:3.20.20.70 4 338 2.7E-27 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS03415 757362e3f2b136977d3ab6393aca3bc6 581 SUPERFAMILY SSF102114 5 334 2.22E-26 T 23-04-2016 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 PIRSF PIRSF001619 1 277 1.2E-79 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 183 271 1.2E-10 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 PANTHER PTHR22976 1 271 2.0E-80 T 23-04-2016 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 SUPERFAMILY SSF102114 4 269 4.58E-53 T 23-04-2016 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 Gene3D G3DSA:3.20.20.70 3 272 1.1E-63 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 Pfam PF04055 Radical SAM superfamily 13 169 1.9E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 SMART SM00729 6 211 2.2E-30 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 TIGRFAM TIGR00433 bioB: biotin synthase 2 271 1.1E-85 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 SMART SM00876 183 273 1.5E-23 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 Hamap MF_01694 Biotin synthase [bioB]. 2 274 32.544 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS00885 c0e55a9dd1d50955413eaac2a99666d7 278 PANTHER PTHR22976:SF1 1 271 2.0E-80 T 23-04-2016 UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 Gene3D G3DSA:3.40.50.300 4 182 7.7E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 Pfam PF07670 Nucleoside recognition 508 644 8.0E-36 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 Pfam PF07670 Nucleoside recognition 346 439 5.5E-13 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 PANTHER PTHR11649:SF37 1 146 2.2E-219 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 PANTHER PTHR11649:SF37 262 673 2.2E-219 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 Pfam PF07664 Ferrous iron transport protein B C terminus 451 503 2.0E-16 T 23-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 641 2.9E-189 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 Pfam PF02421 Ferrous iron transport protein B 5 157 1.6E-56 T 23-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 SUPERFAMILY SSF52540 4 173 9.35E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 PANTHER PTHR11649 1 146 2.2E-219 T 23-04-2016 UPTC3659_RS01515 1a9ef14dbaddf7e08b2b46b35c014f94 674 PANTHER PTHR11649 262 673 2.2E-219 T 23-04-2016 UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 Pfam PF00005 ABC transporter 18 183 1.9E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 Pfam PF00005 ABC transporter 334 463 1.1E-22 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 PANTHER PTHR19211 1 520 7.2E-231 T 23-04-2016 UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 Gene3D G3DSA:3.40.50.300 133 279 2.6E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 Gene3D G3DSA:3.40.50.300 2 101 2.6E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 SUPERFAMILY SSF52540 3 237 1.29E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 SUPERFAMILY SSF52540 296 517 2.53E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 SMART SM00382 26 230 4.6E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 SMART SM00382 342 507 7.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 Gene3D G3DSA:3.40.50.300 316 520 2.2E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 Pfam PF12848 ABC transporter 223 306 4.8E-18 T 23-04-2016 IPR032781 ABC-transporter extension domain UPTC3659_RS01365 ad8813516d9d23cbe0d24b6218cb405b 524 PANTHER PTHR19211:SF38 1 520 7.2E-231 T 23-04-2016 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 Hamap MF_01454 GTPase Obg [obg]. 1 339 44.512 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 SUPERFAMILY SSF52540 152 341 1.19E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 Gene3D G3DSA:3.40.50.300 159 343 1.8E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 337 5.1E-121 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 6.9E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 6.9E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 6.9E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 6.9E-35 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 Pfam PF01926 50S ribosome-binding GTPase 160 266 1.1E-21 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 PANTHER PTHR11702:SF3 2 346 2.8E-122 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 Gene3D G3DSA:2.70.210.12 1 155 8.2E-51 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 PIRSF PIRSF002401 1 347 8.9E-120 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 Pfam PF01018 GTP1/OBG 2 157 1.2E-53 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 PANTHER PTHR11702 2 346 2.8E-122 T 23-04-2016 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 UPTC3659_RS01000 5c1b20d099e556f1d1d741b3cea5cc6d 347 SUPERFAMILY SSF82051 1 157 2.35E-51 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 SUPERFAMILY SSF55205 16 425 5.12E-109 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 419 7.1E-119 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 425 29.609 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 PANTHER PTHR21090 1 426 6.4E-131 T 23-04-2016 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 Gene3D G3DSA:3.65.10.10 233 424 8.4E-46 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 Gene3D G3DSA:3.65.10.10 20 232 2.0E-44 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 PANTHER PTHR21090:SF5 1 426 6.4E-131 T 23-04-2016 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 PIRSF PIRSF000505 2 428 2.7E-102 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 16 424 9.7E-117 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS07140 048f3fa30c1ec07fbbe1d25e821c7da4 428 ProSitePatterns PS00104 EPSP synthase signature 1. 84 98 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS08770 3162bf5626bd2b4c7c0b253aac678c04 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS08770 3162bf5626bd2b4c7c0b253aac678c04 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS08770 3162bf5626bd2b4c7c0b253aac678c04 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 556 43.598 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS08770 3162bf5626bd2b4c7c0b253aac678c04 558 SUPERFAMILY SSF143975 1 376 7.85E-128 T 23-04-2016 UPTC3659_RS08770 3162bf5626bd2b4c7c0b253aac678c04 558 Pfam PF00920 Dehydratase family 31 552 1.8E-211 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS08770 3162bf5626bd2b4c7c0b253aac678c04 558 PANTHER PTHR21000 1 558 1.2E-298 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS08770 3162bf5626bd2b4c7c0b253aac678c04 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 556 7.2E-228 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 UPTC3659_RS08770 3162bf5626bd2b4c7c0b253aac678c04 558 PANTHER PTHR21000:SF11 1 558 1.2E-298 T 23-04-2016 UPTC3659_RS08770 3162bf5626bd2b4c7c0b253aac678c04 558 SUPERFAMILY SSF52016 377 556 2.67E-57 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 SUPERFAMILY SSF50104 127 273 4.39E-60 T 23-04-2016 IPR008991 Translation protein SH3-like domain UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 SMART SM01383 42 118 2.8E-41 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 PANTHER PTHR13691 1 274 5.8E-126 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 2.5E-131 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 Gene3D G3DSA:2.40.50.140 1 114 4.8E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 Gene3D G3DSA:2.30.30.30 123 196 3.6E-34 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 PIRSF PIRSF002158 6 276 4.9E-94 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 44.899 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 SMART SM01382 125 253 2.0E-91 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.7E-30 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 Gene3D G3DSA:4.10.950.10 197 274 2.7E-32 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 SUPERFAMILY SSF50249 2 118 3.77E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS00400 953533689640f7abacde5442a5c38ac8 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 5.5E-56 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS07350 8e50d1fc3bcd27be27a2b466c7d3b114 331 SUPERFAMILY SSF53448 9 256 1.28E-19 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07350 8e50d1fc3bcd27be27a2b466c7d3b114 331 Pfam PF05704 Capsular polysaccharide synthesis protein 32 327 6.3E-81 T 23-04-2016 IPR008441 Capsular polysaccharide synthesis UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 219 231 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 Pfam PF00813 FliP family 46 238 1.6E-80 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 46 242 3.0E-85 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PANTHER PTHR30587 2 244 1.7E-112 T 23-04-2016 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 171 186 - T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 63 83 3.0E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 191 3.0E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 83 102 3.0E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 192 213 3.0E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 44 63 3.0E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 216 241 3.0E-65 T 23-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PANTHER PTHR30587:SF0 2 244 1.7E-112 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 232 242 3.1E-22 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 142 154 3.1E-22 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 114 128 3.1E-22 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 42 51 3.1E-22 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 102 114 3.1E-22 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UPTC3659_RS06010 2e0f9c9607469517216d94d4e0178671 244 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 164 176 3.1E-22 T 23-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UPTC3659_RS06310 530bb0122d221e8f51dd41bd97a12f75 165 Pfam PF04390 Lipopolysaccharide-assembly 7 154 4.5E-7 T 23-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 UPTC3659_RS03040 bbebbbca961dc9c41ccde0d9b3b56f34 395 Gene3D G3DSA:3.30.2010.10 189 280 8.5E-19 T 23-04-2016 UPTC3659_RS03040 bbebbbca961dc9c41ccde0d9b3b56f34 395 PANTHER PTHR10120 1 395 6.6E-83 T 23-04-2016 UPTC3659_RS03040 bbebbbca961dc9c41ccde0d9b3b56f34 395 PANTHER PTHR10120:SF24 1 395 6.6E-83 T 23-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 UPTC3659_RS03040 bbebbbca961dc9c41ccde0d9b3b56f34 395 Pfam PF01435 Peptidase family M48 196 395 2.6E-40 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 UPTC3659_RS03040 bbebbbca961dc9c41ccde0d9b3b56f34 395 SUPERFAMILY SSF103473 257 332 6.8E-5 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS03040 bbebbbca961dc9c41ccde0d9b3b56f34 395 SUPERFAMILY SSF103473 142 199 6.8E-5 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS03040 bbebbbca961dc9c41ccde0d9b3b56f34 395 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 32 192 2.5E-36 T 23-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 UPTC3659_RS00575 b9263ba93d75bcd90a44fdd534a36221 117 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.815 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00575 b9263ba93d75bcd90a44fdd534a36221 117 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00575 b9263ba93d75bcd90a44fdd534a36221 117 Pfam PF01196 Ribosomal protein L17 20 116 4.5E-34 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00575 b9263ba93d75bcd90a44fdd534a36221 117 PANTHER PTHR14413 1 116 1.1E-54 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00575 b9263ba93d75bcd90a44fdd534a36221 117 SUPERFAMILY SSF64263 1 116 9.55E-47 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00575 b9263ba93d75bcd90a44fdd534a36221 117 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 116 4.6E-47 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00575 b9263ba93d75bcd90a44fdd534a36221 117 Gene3D G3DSA:3.90.1030.10 1 116 1.6E-47 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 PANTHER PTHR11731 211 308 2.4E-119 T 23-04-2016 UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 PANTHER PTHR11731 12 170 2.4E-119 T 23-04-2016 UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 23 512 1.8E-57 T 23-04-2016 IPR005674 CocE/Serine esterase GO:0016787 UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 Gene3D G3DSA:3.40.50.1820 8 158 1.4E-72 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 Gene3D G3DSA:3.40.50.1820 216 315 1.4E-72 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 SUPERFAMILY SSF49785 289 333 1.3E-37 T 23-04-2016 IPR008979 Galactose-binding domain-like UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 SUPERFAMILY SSF49785 368 522 1.3E-37 T 23-04-2016 IPR008979 Galactose-binding domain-like UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 24 272 5.3E-59 T 23-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 SUPERFAMILY SSF53474 10 315 1.34E-72 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 SMART SM00939 289 543 6.9E-48 T 23-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 Gene3D G3DSA:2.60.120.260 340 534 6.0E-33 T 23-04-2016 IPR008979 Galactose-binding domain-like UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 PANTHER PTHR11731:SF130 211 308 2.4E-119 T 23-04-2016 UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 PANTHER PTHR11731:SF130 12 170 2.4E-119 T 23-04-2016 UPTC3659_RS05685 a4894d814f7f91f0a36fe8fd1d8426a6 669 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 301 517 7.9E-32 T 23-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 PANTHER PTHR24960:SF45 17 359 1.4E-27 T 23-04-2016 UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 Pfam PF12801 4Fe-4S binding domain 61 105 2.6E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 SUPERFAMILY SSF54862 146 319 2.16E-22 T 23-04-2016 UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 SUPERFAMILY SSF54862 73 94 2.16E-22 T 23-04-2016 UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 Gene3D G3DSA:1.10.1060.10 189 244 1.2E-7 T 23-04-2016 UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 Gene3D G3DSA:2.60.40.10 322 447 6.4E-10 T 23-04-2016 IPR013783 Immunoglobulin-like fold UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 237 248 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 Pfam PF13746 4Fe-4S dicluster domain 187 288 1.1E-38 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 PANTHER PTHR24960 17 359 1.4E-27 T 23-04-2016 UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 Gene3D G3DSA:3.30.70.20 245 277 3.4E-5 T 23-04-2016 UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 319 447 7.3E-22 T 23-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain UPTC3659_RS08845 7576b5c53fcd68ff324af3b85d4a71da 457 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 8 447 3.0E-147 T 23-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 UPTC3659_RS08700 ade45d4f2332d33892b7885a5c354cef 157 PANTHER PTHR34309:SF1 21 153 1.0E-31 T 23-04-2016 UPTC3659_RS08700 ade45d4f2332d33892b7885a5c354cef 157 SUPERFAMILY SSF143744 23 154 1.44E-33 T 23-04-2016 UPTC3659_RS08700 ade45d4f2332d33892b7885a5c354cef 157 PANTHER PTHR34309 21 153 1.0E-31 T 23-04-2016 UPTC3659_RS08700 ade45d4f2332d33892b7885a5c354cef 157 Pfam PF03928 Haem-degrading 28 153 4.3E-26 T 23-04-2016 IPR005624 Haem-degrading UPTC3659_RS09050 2427b2128fde19e9c0b6cf1bd271d9a8 1002 SUPERFAMILY SSF51126 52 251 3.77E-18 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor UPTC3659_RS09050 2427b2128fde19e9c0b6cf1bd271d9a8 1002 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 77 148 1.1E-12 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS09050 2427b2128fde19e9c0b6cf1bd271d9a8 1002 SMART SM00912 27 152 4.0E-10 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS09050 2427b2128fde19e9c0b6cf1bd271d9a8 1002 Pfam PF05860 haemagglutination activity domain 53 152 7.8E-13 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 Gene3D G3DSA:3.40.50.720 2 143 4.6E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 SUPERFAMILY SSF55347 130 322 1.85E-74 T 23-04-2016 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 335 37.795 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 SMART SM00859 3 120 2.5E-40 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 119 9.2E-31 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 320 6.4E-58 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 23-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 SUPERFAMILY SSF51735 1 157 3.05E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 PANTHER PTHR10174 66 336 3.2E-72 T 23-04-2016 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 PIRSF PIRSF000148 1 338 9.1E-122 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 Gene3D G3DSA:3.30.360.10 144 318 3.3E-79 T 23-04-2016 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 3 334 4.9E-138 T 23-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 UPTC3659_RS02810 3d3f0bee494f2e59d35195ec6ae7f7b9 338 PANTHER PTHR10174:SF2 66 336 3.2E-72 T 23-04-2016 UPTC3659_RS02685 667437c8155e9433b4777ee772216206 678 Gene3D G3DSA:2.60.450.10 25 159 1.9E-5 T 23-04-2016 UPTC3659_RS02685 667437c8155e9433b4777ee772216206 678 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 664 14.336 T 23-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 UPTC3659_RS02685 667437c8155e9433b4777ee772216206 678 PANTHER PTHR30189 31 617 1.0E-16 T 23-04-2016 UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 4 384 3.3E-186 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 76 90 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 Gene3D G3DSA:3.40.50.1100 93 172 1.6E-18 T 23-04-2016 UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 PIRSF PIRSF001413 1 391 3.2E-170 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 SUPERFAMILY SSF53686 3 383 4.06E-135 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 385 48.306 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 PANTHER PTHR10314 3 383 1.2E-200 T 23-04-2016 UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 48 372 1.2E-51 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 Gene3D G3DSA:3.40.50.1100 173 388 3.0E-80 T 23-04-2016 UPTC3659_RS07800 1d871ea8a3ad81b54e8e1d9a6af861b2 391 PANTHER PTHR10314:SF3 3 383 1.2E-200 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 UPTC3659_RS04580 b68ddb08075b6fb4b94bb4174ecb9b0d 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 361 9.4E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS04580 b68ddb08075b6fb4b94bb4174ecb9b0d 362 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 120 357 5.8E-64 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 UPTC3659_RS04580 b68ddb08075b6fb4b94bb4174ecb9b0d 362 PANTHER PTHR30425:SF2 117 362 5.8E-82 T 23-04-2016 UPTC3659_RS04580 b68ddb08075b6fb4b94bb4174ecb9b0d 362 PANTHER PTHR30425 117 362 5.8E-82 T 23-04-2016 UPTC3659_RS04580 b68ddb08075b6fb4b94bb4174ecb9b0d 362 SUPERFAMILY SSF161098 121 354 1.02E-34 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS04580 b68ddb08075b6fb4b94bb4174ecb9b0d 362 Pfam PF11812 Domain of unknown function (DUF3333) 4 53 3.4E-6 T 23-04-2016 IPR024573 Domain of unknown function DUF3333 UPTC3659_RS04580 b68ddb08075b6fb4b94bb4174ecb9b0d 362 Gene3D G3DSA:1.10.3720.10 118 358 2.0E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS04580 b68ddb08075b6fb4b94bb4174ecb9b0d 362 Gene3D G3DSA:1.10.3720.10 27 47 2.0E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS07040 c4ccdccc7e3542f9ba44c3ed1eaf0eef 355 PANTHER PTHR30454 3 352 1.4E-158 T 23-04-2016 UPTC3659_RS07040 c4ccdccc7e3542f9ba44c3ed1eaf0eef 355 Pfam PF04551 GcpE protein 7 346 9.0E-127 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 UPTC3659_RS07040 c4ccdccc7e3542f9ba44c3ed1eaf0eef 355 SUPERFAMILY SSF51717 14 204 1.41E-7 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 UPTC3659_RS07040 c4ccdccc7e3542f9ba44c3ed1eaf0eef 355 SUPERFAMILY SSF56014 258 340 9.68E-8 T 23-04-2016 UPTC3659_RS07040 c4ccdccc7e3542f9ba44c3ed1eaf0eef 355 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 4 342 1.2E-117 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 UPTC3659_RS07040 c4ccdccc7e3542f9ba44c3ed1eaf0eef 355 PIRSF PIRSF004640 1 355 8.5E-144 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 UPTC3659_RS07040 c4ccdccc7e3542f9ba44c3ed1eaf0eef 355 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 2 351 32.259 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 UPTC3659_RS07060 baf8429f79461148ec95b87c157d390c 257 Pfam PF08241 Methyltransferase domain 49 139 4.4E-12 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 UPTC3659_RS07060 baf8429f79461148ec95b87c157d390c 257 Gene3D G3DSA:3.40.50.150 21 256 3.9E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07060 baf8429f79461148ec95b87c157d390c 257 SUPERFAMILY SSF53335 3 240 4.11E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07060 baf8429f79461148ec95b87c157d390c 257 PANTHER PTHR10108 1 199 3.8E-15 T 23-04-2016 UPTC3659_RS02945 852cb811f040c0c081d8623801ecb163 156 Gene3D G3DSA:3.40.630.30 1 155 3.9E-45 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS02945 852cb811f040c0c081d8623801ecb163 156 PANTHER PTHR10545 10 155 2.2E-39 T 23-04-2016 UPTC3659_RS02945 852cb811f040c0c081d8623801ecb163 156 Pfam PF00583 Acetyltransferase (GNAT) family 56 135 1.2E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 UPTC3659_RS02945 852cb811f040c0c081d8623801ecb163 156 SUPERFAMILY SSF55729 4 150 4.39E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS06440 9b08b81084170e0e589cf44bca640e4b 301 SUPERFAMILY SSF53800 4 297 1.54E-68 T 23-04-2016 UPTC3659_RS06440 9b08b81084170e0e589cf44bca640e4b 301 TIGRFAM TIGR00109 hemH: ferrochelatase 4 296 1.5E-73 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 UPTC3659_RS06440 9b08b81084170e0e589cf44bca640e4b 301 PANTHER PTHR11108:SF1 4 295 5.8E-62 T 23-04-2016 UPTC3659_RS06440 9b08b81084170e0e589cf44bca640e4b 301 Pfam PF00762 Ferrochelatase 4 297 7.7E-77 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 UPTC3659_RS06440 9b08b81084170e0e589cf44bca640e4b 301 Gene3D G3DSA:3.40.50.1400 191 296 2.5E-26 T 23-04-2016 UPTC3659_RS06440 9b08b81084170e0e589cf44bca640e4b 301 Gene3D G3DSA:3.40.50.1400 4 190 7.9E-43 T 23-04-2016 UPTC3659_RS06440 9b08b81084170e0e589cf44bca640e4b 301 ProSitePatterns PS00534 Ferrochelatase signature. 180 198 - T 23-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 UPTC3659_RS06440 9b08b81084170e0e589cf44bca640e4b 301 Hamap MF_00323 Ferrochelatase [hemH]. 1 301 25.768 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 UPTC3659_RS06440 9b08b81084170e0e589cf44bca640e4b 301 PANTHER PTHR11108 4 295 5.8E-62 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 UPTC3659_RS06090 049b31240730d1aaa3f5d1fdcabf1282 394 PANTHER PTHR23417 1 127 4.5E-37 T 23-04-2016 UPTC3659_RS06090 049b31240730d1aaa3f5d1fdcabf1282 394 PANTHER PTHR23417 167 345 4.5E-37 T 23-04-2016 UPTC3659_RS06090 049b31240730d1aaa3f5d1fdcabf1282 394 PANTHER PTHR23417:SF2 167 345 4.5E-37 T 23-04-2016 UPTC3659_RS06090 049b31240730d1aaa3f5d1fdcabf1282 394 PANTHER PTHR23417:SF2 1 127 4.5E-37 T 23-04-2016 UPTC3659_RS06090 049b31240730d1aaa3f5d1fdcabf1282 394 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 35 195 3.6E-32 T 23-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PANTHER PTHR11406 1 391 3.4E-204 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 2.2E-84 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PRINTS PR00477 Phosphoglycerate kinase family signature 171 193 2.2E-84 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PRINTS PR00477 Phosphoglycerate kinase family signature 194 213 2.2E-84 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PRINTS PR00477 Phosphoglycerate kinase family signature 11 27 2.2E-84 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PRINTS PR00477 Phosphoglycerate kinase family signature 372 389 2.2E-84 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 2.2E-84 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PRINTS PR00477 Phosphoglycerate kinase family signature 33 55 2.2E-84 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PRINTS PR00477 Phosphoglycerate kinase family signature 349 360 2.2E-84 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 2.2E-84 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 396 39.166 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 Gene3D G3DSA:3.40.50.1260 5 181 1.4E-70 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 SUPERFAMILY SSF53748 5 394 1.3E-144 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 16 26 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 Pfam PF00162 Phosphoglycerate kinase 7 386 8.1E-153 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 Gene3D G3DSA:3.40.50.1270 184 384 2.6E-80 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS02175 95fd9f00700e2df189481faa25da1ea7 400 PIRSF PIRSF000724 1 400 1.3E-150 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 UPTC3659_RS06915 80935bf0b59cd5f9d4c4e55f207f606e 454 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 2 451 6.6E-167 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UPTC3659_RS06915 80935bf0b59cd5f9d4c4e55f207f606e 454 Gene3D G3DSA:3.90.1300.10 50 452 3.2E-136 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UPTC3659_RS06915 80935bf0b59cd5f9d4c4e55f207f606e 454 Pfam PF01425 Amidase 44 441 6.7E-134 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UPTC3659_RS06915 80935bf0b59cd5f9d4c4e55f207f606e 454 SUPERFAMILY SSF75304 49 450 1.96E-124 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UPTC3659_RS06915 80935bf0b59cd5f9d4c4e55f207f606e 454 PANTHER PTHR11895 50 452 4.9E-166 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UPTC3659_RS06915 80935bf0b59cd5f9d4c4e55f207f606e 454 PANTHER PTHR11895:SF7 50 452 4.9E-166 T 23-04-2016 UPTC3659_RS06915 80935bf0b59cd5f9d4c4e55f207f606e 454 ProSitePatterns PS00571 Amidases signature. 129 160 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UPTC3659_RS06915 80935bf0b59cd5f9d4c4e55f207f606e 454 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 4 452 82.826 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 308 384 3.1E-30 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Gene3D G3DSA:1.10.150.20 420 486 3.5E-20 T 23-04-2016 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 PIRSF PIRSF001604 1 650 1.1E-217 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 318 333 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 PANTHER PTHR23389:SF9 4 519 1.3E-146 T 23-04-2016 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Gene3D G3DSA:3.30.470.30 112 238 5.5E-47 T 23-04-2016 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Hamap MF_01588 DNA ligase [ligA]. 1 645 44.589 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 641 5.9E-212 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SUPERFAMILY SSF52113 576 645 3.2E-19 T 23-04-2016 IPR001357 BRCT domain UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 304 2.6E-100 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Gene3D G3DSA:1.10.150.20 488 552 3.3E-13 T 23-04-2016 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SUPERFAMILY SSF47781 392 551 1.61E-43 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Gene3D G3DSA:2.40.50.140 306 377 4.8E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 107 136 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SMART SM00532 1 432 3.5E-230 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Gene3D G3DSA:3.40.50.10190 576 646 2.0E-24 T 23-04-2016 IPR001357 BRCT domain UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Gene3D G3DSA:1.10.287.610 10 63 5.1E-14 T 23-04-2016 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SMART SM00292 572 648 1.9E-13 T 23-04-2016 IPR001357 BRCT domain UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 576 644 4.3E-11 T 23-04-2016 IPR001357 BRCT domain UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SMART SM00278 430 449 560.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SMART SM00278 464 483 140.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SMART SM00278 496 515 280.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SMART SM00278 526 545 710.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SUPERFAMILY SSF56091 4 303 5.96E-97 T 23-04-2016 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 Pfam PF12826 Helix-hairpin-helix motif 494 552 2.7E-8 T 23-04-2016 UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 SUPERFAMILY SSF50249 306 384 7.88E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS03865 c416e481408bab05f0bb52cbf0292ea4 651 PANTHER PTHR23389 4 519 1.3E-146 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 SUPERFAMILY SSF54810 391 511 1.57E-49 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 192 4.0E-80 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 Gene3D G3DSA:3.40.50.880 5 192 8.2E-70 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PANTHER PTHR11922:SF2 6 508 4.5E-275 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PANTHER PTHR11922 6 508 4.5E-275 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 Gene3D G3DSA:3.30.300.10 387 511 7.1E-51 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 511 54.055 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 SUPERFAMILY SSF52317 6 197 1.83E-59 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 Pfam PF00958 GMP synthase C terminal domain 419 510 2.4E-43 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 1.0E-5 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 1.0E-5 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 6 20 1.0E-5 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 Gene3D G3DSA:3.40.50.620 196 384 8.6E-55 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 Pfam PF02540 NAD synthase 211 282 2.6E-5 T 23-04-2016 IPR022310 NAD/GMP synthase UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 Pfam PF00117 Glutamine amidotransferase class-I 8 186 8.9E-47 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PRINTS PR00097 Anthranilate synthase component II signature 165 178 6.9E-5 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PRINTS PR00097 Anthranilate synthase component II signature 77 88 6.9E-5 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PRINTS PR00097 Anthranilate synthase component II signature 50 59 6.9E-5 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 5.8E-7 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 5.8E-7 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 5.8E-7 T 23-04-2016 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 201 511 2.2E-148 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 UPTC3659_RS02660 81bcdfd88b2b71d4fb67dd74af6995bd 511 SUPERFAMILY SSF52402 181 432 1.61E-50 T 23-04-2016 UPTC3659_RS08035 996ff050d0d7e88029f34e48bcd84eab 115 Pfam PF00893 Small Multidrug Resistance protein 12 99 1.0E-17 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 UPTC3659_RS08035 996ff050d0d7e88029f34e48bcd84eab 115 PANTHER PTHR30561:SF7 9 115 3.1E-27 T 23-04-2016 UPTC3659_RS08035 996ff050d0d7e88029f34e48bcd84eab 115 SUPERFAMILY SSF103481 15 109 3.4E-13 T 23-04-2016 UPTC3659_RS08035 996ff050d0d7e88029f34e48bcd84eab 115 PANTHER PTHR30561 9 115 3.1E-27 T 23-04-2016 UPTC3659_RS08825 0b5d1fd052eb3f2be925a0da215d243d 390 SUPERFAMILY SSF52440 178 287 8.34E-16 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS08825 0b5d1fd052eb3f2be925a0da215d243d 390 PANTHER PTHR30094:SF0 40 390 3.6E-51 T 23-04-2016 UPTC3659_RS08825 0b5d1fd052eb3f2be925a0da215d243d 390 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 388 5.0E-119 T 23-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain UPTC3659_RS08825 0b5d1fd052eb3f2be925a0da215d243d 390 PANTHER PTHR30094 40 390 3.6E-51 T 23-04-2016 UPTC3659_RS08825 0b5d1fd052eb3f2be925a0da215d243d 390 SUPERFAMILY SSF56059 11 162 9.89E-66 T 23-04-2016 UPTC3659_RS08825 0b5d1fd052eb3f2be925a0da215d243d 390 SUPERFAMILY SSF56059 274 387 9.89E-66 T 23-04-2016 UPTC3659_RS06590 56b7745589da4260265361bcb39a9270 167 Gene3D G3DSA:2.102.10.10 10 157 1.2E-36 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 UPTC3659_RS06590 56b7745589da4260265361bcb39a9270 167 Pfam PF00355 Rieske [2Fe-2S] domain 51 142 1.7E-12 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 UPTC3659_RS06590 56b7745589da4260265361bcb39a9270 167 PANTHER PTHR10134 6 161 2.2E-28 T 23-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 UPTC3659_RS06590 56b7745589da4260265361bcb39a9270 167 PRINTS PR00162 Rieske 2Fe-2S subunit signature 94 105 3.0E-9 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 UPTC3659_RS06590 56b7745589da4260265361bcb39a9270 167 PRINTS PR00162 Rieske 2Fe-2S subunit signature 115 127 3.0E-9 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 UPTC3659_RS06590 56b7745589da4260265361bcb39a9270 167 PRINTS PR00162 Rieske 2Fe-2S subunit signature 127 139 3.0E-9 T 23-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 UPTC3659_RS06590 56b7745589da4260265361bcb39a9270 167 SUPERFAMILY SSF50022 28 161 1.79E-31 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 213 363 9.3E-56 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 Gene3D G3DSA:3.30.1330.50 209 364 4.0E-63 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 SUPERFAMILY SSF69765 210 368 1.1E-58 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 244 259 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 92 99 - T 23-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 210 365 31.265 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 Gene3D G3DSA:3.90.550.10 3 201 1.4E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 SUPERFAMILY SSF53448 4 202 3.92E-48 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 Pfam PF02542 YgbB family 213 363 4.1E-59 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 PANTHER PTHR32125 1 69 1.1E-41 T 23-04-2016 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 PANTHER PTHR32125 222 369 1.1E-41 T 23-04-2016 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 2 366 36.325 T 23-04-2016 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056|UniPathway: UPA00056 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 199 6.5E-29 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS01315 e6a55cd99821e3c652e815400c42f269 371 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 201 2.3E-57 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS07785 7c766abd96b26311722f0bdce56d4cac 450 Gene3D G3DSA:1.20.1250.20 21 235 4.1E-28 T 23-04-2016 UPTC3659_RS07785 7c766abd96b26311722f0bdce56d4cac 450 Gene3D G3DSA:1.20.1250.20 246 441 5.3E-18 T 23-04-2016 UPTC3659_RS07785 7c766abd96b26311722f0bdce56d4cac 450 PANTHER PTHR23508 22 444 9.0E-130 T 23-04-2016 UPTC3659_RS07785 7c766abd96b26311722f0bdce56d4cac 450 PANTHER PTHR23508:SF1 22 444 9.0E-130 T 23-04-2016 UPTC3659_RS07785 7c766abd96b26311722f0bdce56d4cac 450 Pfam PF00083 Sugar (and other) transporter 64 447 2.0E-35 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 UPTC3659_RS07785 7c766abd96b26311722f0bdce56d4cac 450 SUPERFAMILY SSF103473 13 444 4.05E-67 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS07785 7c766abd96b26311722f0bdce56d4cac 450 ProSitePatterns PS00216 Sugar transport proteins signature 1. 310 325 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UPTC3659_RS06875 7604183c7d45895ff2de5b26cf22351e 232 Pfam PF02146 Sir2 family 9 179 1.6E-41 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 UPTC3659_RS06875 7604183c7d45895ff2de5b26cf22351e 232 PANTHER PTHR11085 2 189 7.5E-52 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 UPTC3659_RS06875 7604183c7d45895ff2de5b26cf22351e 232 Gene3D G3DSA:3.40.50.1220 158 213 3.9E-27 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain UPTC3659_RS06875 7604183c7d45895ff2de5b26cf22351e 232 Gene3D G3DSA:3.40.50.1220 2 17 3.9E-27 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain UPTC3659_RS06875 7604183c7d45895ff2de5b26cf22351e 232 Gene3D G3DSA:3.40.50.1220 65 107 3.9E-27 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain UPTC3659_RS06875 7604183c7d45895ff2de5b26cf22351e 232 PANTHER PTHR11085:SF17 2 189 7.5E-52 T 23-04-2016 UPTC3659_RS06875 7604183c7d45895ff2de5b26cf22351e 232 SUPERFAMILY SSF52467 1 213 1.82E-56 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain UPTC3659_RS06875 7604183c7d45895ff2de5b26cf22351e 232 Gene3D G3DSA:3.30.1600.10 18 57 3.9E-20 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain UPTC3659_RS06875 7604183c7d45895ff2de5b26cf22351e 232 Gene3D G3DSA:3.30.1600.10 108 151 3.9E-20 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain UPTC3659_RS00735 5e92265ae071aa0841ceec885b954ec0 285 Gene3D G3DSA:3.20.20.70 3 280 3.0E-23 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS00735 5e92265ae071aa0841ceec885b954ec0 285 Pfam PF13186 Iron-sulfur cluster-binding domain 211 277 8.7E-12 T 23-04-2016 IPR023885 4Fe4S-binding SPASM domain UPTC3659_RS00735 5e92265ae071aa0841ceec885b954ec0 285 PANTHER PTHR11228 6 253 4.2E-23 T 23-04-2016 UPTC3659_RS00735 5e92265ae071aa0841ceec885b954ec0 285 SUPERFAMILY SSF102114 5 279 7.46E-25 T 23-04-2016 UPTC3659_RS00735 5e92265ae071aa0841ceec885b954ec0 285 PANTHER PTHR11228:SF28 6 253 4.2E-23 T 23-04-2016 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 SMART SM00830 8 87 2.7E-29 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 SUPERFAMILY SSF48600 3 90 2.14E-22 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 PANTHER PTHR21022:SF0 3 349 9.2E-100 T 23-04-2016 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 Pfam PF01817 Chorismate mutase type II 8 84 1.5E-22 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 Gene3D G3DSA:3.40.190.10 174 253 5.8E-25 T 23-04-2016 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 TIGRFAM TIGR01807 CM_P2: chorismate mutase 5 77 4.8E-29 T 23-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 SUPERFAMILY SSF53850 89 266 4.67E-53 T 23-04-2016 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 Gene3D G3DSA:1.20.59.10 1 84 7.1E-22 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 303 310 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 PIRSF PIRSF001500 1 357 7.6E-129 T 23-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 Pfam PF00800 Prephenate dehydratase 89 265 1.9E-59 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 PANTHER PTHR21022 3 349 9.2E-100 T 23-04-2016 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 SUPERFAMILY SSF55021 260 349 4.21E-19 T 23-04-2016 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 Gene3D G3DSA:3.40.190.10 85 173 3.7E-28 T 23-04-2016 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 Gene3D G3DSA:3.30.70.260 273 349 1.0E-23 T 23-04-2016 UPTC3659_RS07865 8c684b8ce79f28292a257d7e0cdb2713 357 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 241 263 - T 23-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 UPTC3659_RS06460 2826631460d3ba09151a8830ec712aa8 180 Gene3D G3DSA:3.90.950.10 2 180 3.4E-35 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like UPTC3659_RS06460 2826631460d3ba09151a8830ec712aa8 180 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 178 6.3E-37 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 UPTC3659_RS06460 2826631460d3ba09151a8830ec712aa8 180 SUPERFAMILY SSF52972 1 180 1.18E-37 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like UPTC3659_RS06460 2826631460d3ba09151a8830ec712aa8 180 Pfam PF02545 Maf-like protein 2 180 6.1E-26 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 UPTC3659_RS06460 2826631460d3ba09151a8830ec712aa8 180 PIRSF PIRSF006305 1 180 2.1E-32 T 23-04-2016 IPR003697 Maf-like protein GO:0005737 UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 Gene3D G3DSA:3.30.1490.20 131 203 1.6E-30 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 SUPERFAMILY SSF56059 84 328 5.72E-69 T 23-04-2016 UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 SUPERFAMILY SSF52440 2 114 2.88E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 3 442 1.3E-201 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 Gene3D G3DSA:3.30.470.20 204 443 3.3E-99 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 SMART SM00878 336 441 3.1E-56 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 324 1.5E-80 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 SUPERFAMILY SSF51246 331 443 9.42E-41 T 23-04-2016 IPR011054 Rudiment single hybrid motif UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 4.5E-41 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 PANTHER PTHR18866 3 443 8.8E-279 T 23-04-2016 UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.0E-36 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal UPTC3659_RS07615 ee62f2b13e17cd9d0413b7fd4bbc3b8e 443 Gene3D G3DSA:3.40.50.20 3 130 1.7E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS00535 e351894e1873924995f9b7b0b84c5832 306 PANTHER PTHR30600 15 305 4.1E-96 T 23-04-2016 UPTC3659_RS00535 e351894e1873924995f9b7b0b84c5832 306 Pfam PF00034 Cytochrome c 186 297 1.4E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00535 e351894e1873924995f9b7b0b84c5832 306 Gene3D G3DSA:1.10.760.10 171 301 2.0E-44 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00535 e351894e1873924995f9b7b0b84c5832 306 PIRSF PIRSF000294 13 304 1.4E-94 T 23-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 UPTC3659_RS00535 e351894e1873924995f9b7b0b84c5832 306 PANTHER PTHR30600:SF7 15 305 4.1E-96 T 23-04-2016 UPTC3659_RS00535 e351894e1873924995f9b7b0b84c5832 306 Pfam PF03150 Di-haem cytochrome c peroxidase 32 179 7.4E-44 T 23-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 UPTC3659_RS00535 e351894e1873924995f9b7b0b84c5832 306 SUPERFAMILY SSF46626 166 303 6.17E-37 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00535 e351894e1873924995f9b7b0b84c5832 306 SUPERFAMILY SSF46626 11 167 2.42E-41 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00535 e351894e1873924995f9b7b0b84c5832 306 Gene3D G3DSA:1.10.760.10 22 170 8.4E-44 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS00700 dc9de49e21361c742de73b6c5ac5cff7 88 Pfam PF13453 Transcription factor zinc-finger 2 43 1.4E-21 T 23-04-2016 IPR027392 Transcription factor zinc-finger UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 381 398 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 PRINTS PR00662 Glucose-6-phosphate isomerase signature 367 381 3.4E-17 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 PRINTS PR00662 Glucose-6-phosphate isomerase signature 349 367 3.4E-17 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 PRINTS PR00662 Glucose-6-phosphate isomerase signature 170 188 3.4E-17 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 PRINTS PR00662 Glucose-6-phosphate isomerase signature 61 80 3.4E-17 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 PRINTS PR00662 Glucose-6-phosphate isomerase signature 381 394 3.4E-17 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 PRINTS PR00662 Glucose-6-phosphate isomerase signature 241 262 3.4E-17 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 PANTHER PTHR11469:SF1 54 407 2.0E-68 T 23-04-2016 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 PANTHER PTHR11469 54 407 2.0E-68 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 SUPERFAMILY SSF53697 31 406 9.94E-98 T 23-04-2016 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 Gene3D G3DSA:3.40.50.10490 173 390 2.4E-66 T 23-04-2016 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 Gene3D G3DSA:3.40.50.10490 54 172 4.8E-26 T 23-04-2016 UPTC3659_RS01340 67d36f1fa1456c84ba75835db8a816f0 407 Pfam PF00342 Phosphoglucose isomerase 54 405 5.8E-33 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 SUPERFAMILY SSF54631 233 371 2.44E-28 T 23-04-2016 UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 PANTHER PTHR22777 26 456 9.7E-165 T 23-04-2016 UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 Gene3D G3DSA:3.30.465.10 352 449 2.6E-22 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 Gene3D G3DSA:3.10.580.10 225 351 3.8E-19 T 23-04-2016 UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 Pfam PF03471 Transporter associated domain 373 450 7.4E-18 T 23-04-2016 IPR005170 Transporter-associated domain UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 SMART SM01091 372 451 1.1E-21 T 23-04-2016 IPR005170 Transporter-associated domain UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 Pfam PF00571 CBS domain 310 357 2.8E-7 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 SMART SM00116 309 357 1.3 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 SMART SM00116 247 296 8.6 T 23-04-2016 IPR000644 CBS domain UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 SUPERFAMILY SSF56176 370 455 2.51E-17 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 PANTHER PTHR22777:SF18 26 456 9.7E-165 T 23-04-2016 UPTC3659_RS02385 e85daced75886bbd88e79947f3b0eb25 456 Pfam PF01595 Domain of unknown function DUF21 29 221 4.6E-45 T 23-04-2016 IPR002550 Domain of unknown function DUF21 UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 Pfam PF00753 Metallo-beta-lactamase superfamily 115 267 1.6E-16 T 23-04-2016 IPR001279 Metallo-beta-lactamase UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 SUPERFAMILY SSF56281 106 523 1.23E-90 T 23-04-2016 IPR001279 Metallo-beta-lactamase UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 Hamap MF_01491 Ribonuclease J [rnj]. 101 654 42.386 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 Gene3D G3DSA:3.60.15.10 103 354 7.4E-77 T 23-04-2016 IPR001279 Metallo-beta-lactamase UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 106 651 2.0E-195 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 PANTHER PTHR11203 98 651 1.1E-191 T 23-04-2016 UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 454 507 6.4E-9 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 SMART SM00849 118 314 1.7E-24 T 23-04-2016 IPR001279 Metallo-beta-lactamase UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 463 491 - T 23-04-2016 IPR001587 Ribonuclease J, conserved site UPTC3659_RS00115 14ca751e113bdd8dcfbe688ee155b807 654 PANTHER PTHR11203:SF22 98 651 1.1E-191 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 SMART SM01004 1 323 1.1E-214 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 PANTHER PTHR11458 4 323 7.5E-166 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 PIRSF PIRSF001415 1 325 9.6E-141 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 SUPERFAMILY SSF51569 2 324 4.54E-134 T 23-04-2016 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 321 1.4E-138 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 Gene3D G3DSA:3.20.20.70 2 324 1.2E-142 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 297 316 4.7E-55 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 267 282 4.7E-55 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 120 134 4.7E-55 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 152 171 4.7E-55 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 242 258 4.7E-55 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 190 209 4.7E-55 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06755 c0f61d3864058ca6ed480294c9ac01ce 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 242 254 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS02885 d64458e910709b1bebd055639553fee3 227 SMART SM00934 2 222 8.3E-69 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS02885 d64458e910709b1bebd055639553fee3 227 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 3 222 8.3E-61 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS02885 d64458e910709b1bebd055639553fee3 227 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 1 227 30.966 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS02885 d64458e910709b1bebd055639553fee3 227 Gene3D G3DSA:3.20.20.70 2 225 2.7E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS02885 d64458e910709b1bebd055639553fee3 227 PANTHER PTHR32119 1 224 3.4E-67 T 23-04-2016 UPTC3659_RS02885 d64458e910709b1bebd055639553fee3 227 SUPERFAMILY SSF51366 2 225 9.74E-61 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 UPTC3659_RS02885 d64458e910709b1bebd055639553fee3 227 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 1 221 1.7E-43 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS02885 d64458e910709b1bebd055639553fee3 227 PANTHER PTHR32119:SF2 1 224 3.4E-67 T 23-04-2016 UPTC3659_RS02885 d64458e910709b1bebd055639553fee3 227 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 55 68 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS02580 7527793432a58d02c04041c88ebe78bf 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 90 3.8E-14 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 UPTC3659_RS02580 7527793432a58d02c04041c88ebe78bf 95 PANTHER PTHR15004 1 95 8.9E-20 T 23-04-2016 UPTC3659_RS02580 7527793432a58d02c04041c88ebe78bf 95 SUPERFAMILY SSF141000 2 93 5.89E-22 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 UPTC3659_RS02580 7527793432a58d02c04041c88ebe78bf 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 18.737 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 UPTC3659_RS02580 7527793432a58d02c04041c88ebe78bf 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 3.0E-22 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 UPTC3659_RS03990 5b941e643377c55ca77881c1f197e657 275 PANTHER PTHR18966:SF191 32 253 4.8E-42 T 23-04-2016 UPTC3659_RS03990 5b941e643377c55ca77881c1f197e657 275 SUPERFAMILY SSF53850 1 252 4.35E-57 T 23-04-2016 UPTC3659_RS03990 5b941e643377c55ca77881c1f197e657 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 251 2.2E-43 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UPTC3659_RS03990 5b941e643377c55ca77881c1f197e657 275 PANTHER PTHR18966 32 253 4.8E-42 T 23-04-2016 UPTC3659_RS03990 5b941e643377c55ca77881c1f197e657 275 Gene3D G3DSA:3.40.190.10 117 215 4.1E-20 T 23-04-2016 UPTC3659_RS03990 5b941e643377c55ca77881c1f197e657 275 Gene3D G3DSA:3.40.190.10 217 253 1.9E-29 T 23-04-2016 UPTC3659_RS03990 5b941e643377c55ca77881c1f197e657 275 Gene3D G3DSA:3.40.190.10 33 116 1.9E-29 T 23-04-2016 UPTC3659_RS03990 5b941e643377c55ca77881c1f197e657 275 SMART SM00062 36 257 4.4E-66 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 3.1E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 155 179 3.1E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 120 128 3.1E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 278 296 3.1E-19 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 290 1.1E-18 T 23-04-2016 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.1E-18 T 23-04-2016 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.1E-18 T 23-04-2016 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.1E-18 T 23-04-2016 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 Gene3D G3DSA:3.50.50.60 2 132 1.0E-20 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 287 2.6E-53 T 23-04-2016 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 SUPERFAMILY SSF51905 1 311 7.12E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PANTHER PTHR22912 1 33 1.1E-22 T 23-04-2016 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 PANTHER PTHR22912 56 292 1.1E-22 T 23-04-2016 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 Gene3D G3DSA:3.50.50.60 236 292 7.6E-8 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS05695 467207ae6aaa13add857bcbec8a210ea 314 Gene3D G3DSA:3.50.50.60 154 235 1.0E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS05940 cfa824f75f59e1b9c384040a8df861d7 570 PANTHER PTHR33451 9 566 2.6E-171 T 23-04-2016 UPTC3659_RS05940 cfa824f75f59e1b9c384040a8df861d7 570 Pfam PF03553 Na+/H+ antiporter family 188 534 8.5E-56 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 UPTC3659_RS05940 cfa824f75f59e1b9c384040a8df861d7 570 PANTHER PTHR33451:SF7 9 566 2.6E-171 T 23-04-2016 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 SUPERFAMILY SSF54913 226 298 7.67E-20 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 34.025 T 23-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 199 297 1.2E-29 T 23-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 Gene3D G3DSA:3.40.190.10 2 139 1.6E-48 T 23-04-2016 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 23-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 SUPERFAMILY SSF53850 6 224 4.99E-67 T 23-04-2016 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 PANTHER PTHR21403 2 299 3.6E-115 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 196 4.9E-52 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 Gene3D G3DSA:3.30.70.120 226 298 9.0E-28 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 Pfam PF01634 ATP phosphoribosyltransferase 54 218 6.7E-47 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 PANTHER PTHR21403:SF0 2 299 3.6E-115 T 23-04-2016 UPTC3659_RS00580 f205343cb71704bd562a1146232adbf0 299 Pfam PF08029 HisG, C-terminal domain 223 296 8.1E-23 T 23-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 UPTC3659_RS02190 6571b266567b45402d9e0bf856f2f4ba 109 SUPERFAMILY SSF81301 2 99 3.27E-23 T 23-04-2016 UPTC3659_RS02190 6571b266567b45402d9e0bf856f2f4ba 109 Gene3D G3DSA:3.30.460.10 2 99 5.2E-25 T 23-04-2016 UPTC3659_RS02190 6571b266567b45402d9e0bf856f2f4ba 109 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 5 99 1.5E-25 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS UPTC3659_RS02190 6571b266567b45402d9e0bf856f2f4ba 109 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 101 17.55 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS UPTC3659_RS02190 6571b266567b45402d9e0bf856f2f4ba 109 Pfam PF02410 Ribosomal silencing factor during starvation 7 99 2.9E-19 T 23-04-2016 UPTC3659_RS02190 6571b266567b45402d9e0bf856f2f4ba 109 PANTHER PTHR21043 5 99 2.4E-17 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 1 357 36.977 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 PANTHER PTHR30525:SF0 1 351 4.7E-106 T 23-04-2016 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 Gene3D G3DSA:1.10.1740.10 279 357 7.3E-15 T 23-04-2016 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 PIRSF PIRSF006205 1 359 3.0E-114 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 SUPERFAMILY SSF69055 268 356 3.14E-19 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 128 208 5.0E-32 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 SUPERFAMILY SSF55347 113 239 3.01E-41 T 23-04-2016 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 PANTHER PTHR30525 1 351 4.7E-106 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 Pfam PF13288 DXP reductoisomerase C-terminal domain 239 351 6.1E-23 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 SUPERFAMILY SSF51735 2 122 9.65E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 Gene3D G3DSA:3.40.50.720 1 123 2.1E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 354 2.4E-104 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS08740 db9f0affd3416b42bd3cd8a2b2ca03b6 359 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 119 3.3E-34 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 UPTC3659_RS04520 021dedd8d93cefd32f242cbc655c5a26 121 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 108 5.6E-27 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 UPTC3659_RS04520 021dedd8d93cefd32f242cbc655c5a26 121 PIRSF PIRSF004761 1 114 1.0E-30 T 23-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 UPTC3659_RS04520 021dedd8d93cefd32f242cbc655c5a26 121 PANTHER PTHR34535 2 113 5.1E-28 T 23-04-2016 UPTC3659_RS04520 021dedd8d93cefd32f242cbc655c5a26 121 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 31 74 - T 23-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site UPTC3659_RS04520 021dedd8d93cefd32f242cbc655c5a26 121 PANTHER PTHR34535:SF3 2 113 5.1E-28 T 23-04-2016 UPTC3659_RS04590 0c7ea36d8db039bd35e2d8c201d5563c 327 PANTHER PTHR30570 1 313 4.8E-38 T 23-04-2016 UPTC3659_RS04590 0c7ea36d8db039bd35e2d8c201d5563c 327 Gene3D G3DSA:3.40.190.10 19 153 2.0E-29 T 23-04-2016 UPTC3659_RS04590 0c7ea36d8db039bd35e2d8c201d5563c 327 Pfam PF12849 PBP superfamily domain 19 275 1.3E-27 T 23-04-2016 IPR024370 PBP domain UPTC3659_RS04590 0c7ea36d8db039bd35e2d8c201d5563c 327 Gene3D G3DSA:3.40.190.10 154 265 3.5E-14 T 23-04-2016 UPTC3659_RS04590 0c7ea36d8db039bd35e2d8c201d5563c 327 PANTHER PTHR30570:SF1 1 313 4.8E-38 T 23-04-2016 UPTC3659_RS04590 0c7ea36d8db039bd35e2d8c201d5563c 327 SUPERFAMILY SSF53850 19 311 1.46E-56 T 23-04-2016 UPTC3659_RS06660 f6d7799100af8c2a8c995278a5d94208 371 SUPERFAMILY SSF53822 20 365 4.19E-71 T 23-04-2016 IPR028082 Periplasmic binding protein-like I UPTC3659_RS06660 f6d7799100af8c2a8c995278a5d94208 371 Gene3D G3DSA:3.40.50.2300 140 311 5.8E-43 T 23-04-2016 UPTC3659_RS06660 f6d7799100af8c2a8c995278a5d94208 371 PANTHER PTHR30483:SF6 4 365 6.2E-61 T 23-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 UPTC3659_RS06660 f6d7799100af8c2a8c995278a5d94208 371 Pfam PF13458 Periplasmic binding protein 21 349 4.7E-46 T 23-04-2016 IPR028081 Leucine-binding protein domain UPTC3659_RS06660 f6d7799100af8c2a8c995278a5d94208 371 Gene3D G3DSA:3.40.50.2300 15 139 4.5E-6 T 23-04-2016 UPTC3659_RS06660 f6d7799100af8c2a8c995278a5d94208 371 PANTHER PTHR30483 4 365 6.2E-61 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 Pfam PF02743 Cache domain 59 231 8.7E-21 T 23-04-2016 IPR033479 Double Cache domain 1 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 Gene3D G3DSA:1.10.287.950 459 650 4.0E-44 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 Gene3D G3DSA:3.30.450.20 98 191 1.7E-18 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 PANTHER PTHR32089 404 428 1.7E-58 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 PANTHER PTHR32089 470 652 1.7E-58 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 PANTHER PTHR32089 134 350 1.7E-58 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 514 603 1.5E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 SUPERFAMILY SSF58104 459 656 8.63E-49 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 SUPERFAMILY SSF58104 340 370 8.63E-49 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 SUPERFAMILY SSF103190 55 199 1.62E-13 T 23-04-2016 IPR029151 Periplasmic sensor domain-like UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 SMART SM00283 467 658 4.4E-26 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 PANTHER PTHR32089:SF1 404 428 1.7E-58 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 PANTHER PTHR32089:SF1 470 652 1.7E-58 T 23-04-2016 UPTC3659_RS06735 d962b5af897c87d5194da25ec8c2f87d 659 PANTHER PTHR32089:SF1 134 350 1.7E-58 T 23-04-2016 UPTC3659_RS03720 687e2c6a269e1398f2b2dfaa7f3b5fd1 172 Gene3D G3DSA:3.90.80.10 6 172 6.6E-61 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 UPTC3659_RS03720 687e2c6a269e1398f2b2dfaa7f3b5fd1 172 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 64 70 - T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 UPTC3659_RS03720 687e2c6a269e1398f2b2dfaa7f3b5fd1 172 SUPERFAMILY SSF50324 10 172 9.16E-66 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 UPTC3659_RS03720 687e2c6a269e1398f2b2dfaa7f3b5fd1 172 Pfam PF00719 Inorganic pyrophosphatase 17 172 7.4E-56 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 UPTC3659_RS03720 687e2c6a269e1398f2b2dfaa7f3b5fd1 172 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 13 172 36.414 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 UPTC3659_RS03720 687e2c6a269e1398f2b2dfaa7f3b5fd1 172 PANTHER PTHR10286 16 172 2.3E-69 T 23-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 UPTC3659_RS02525 bb8e0d23e28b7425ab2f1a4e0a1fba5d 101 Gene3D G3DSA:1.10.760.10 19 99 3.6E-15 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS02525 bb8e0d23e28b7425ab2f1a4e0a1fba5d 101 SUPERFAMILY SSF46626 6 99 3.87E-16 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS02525 bb8e0d23e28b7425ab2f1a4e0a1fba5d 101 Pfam PF00034 Cytochrome c 19 100 1.4E-7 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS01380 ee010ec115424ff6882cfb4b795aeb05 319 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 189 1.4E-50 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 UPTC3659_RS01380 ee010ec115424ff6882cfb4b795aeb05 319 PANTHER PTHR11807 16 219 8.3E-48 T 23-04-2016 UPTC3659_RS01380 ee010ec115424ff6882cfb4b795aeb05 319 SUPERFAMILY SSF52402 11 209 1.58E-44 T 23-04-2016 UPTC3659_RS01380 ee010ec115424ff6882cfb4b795aeb05 319 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 312 18.863 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 UPTC3659_RS01380 ee010ec115424ff6882cfb4b795aeb05 319 PANTHER PTHR11807:SF2 16 219 8.3E-48 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 UPTC3659_RS01380 ee010ec115424ff6882cfb4b795aeb05 319 Pfam PF01171 PP-loop family 15 188 4.6E-53 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal UPTC3659_RS01380 ee010ec115424ff6882cfb4b795aeb05 319 Gene3D G3DSA:3.40.50.620 5 168 1.1E-14 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS07180 549b1cd938e8a742aa077a8d2dce113e 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 38 57 1.2E-11 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07180 549b1cd938e8a742aa077a8d2dce113e 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 9 30 1.2E-11 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07180 549b1cd938e8a742aa077a8d2dce113e 450 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 301 320 1.2E-11 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07180 549b1cd938e8a742aa077a8d2dce113e 450 PANTHER PTHR11616:SF167 6 449 6.4E-106 T 23-04-2016 UPTC3659_RS07180 549b1cd938e8a742aa077a8d2dce113e 450 PANTHER PTHR11616 6 449 6.4E-106 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07180 549b1cd938e8a742aa077a8d2dce113e 450 SUPERFAMILY SSF161070 6 449 2.75E-103 T 23-04-2016 UPTC3659_RS07180 549b1cd938e8a742aa077a8d2dce113e 450 Pfam PF00209 Sodium:neurotransmitter symporter family 142 447 2.0E-18 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07180 549b1cd938e8a742aa077a8d2dce113e 450 Pfam PF00209 Sodium:neurotransmitter symporter family 6 116 6.6E-20 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS06255 587cfb0ab9b773b81494eb294f0a3e61 189 PANTHER PTHR11839 1 185 4.4E-39 T 23-04-2016 UPTC3659_RS06255 587cfb0ab9b773b81494eb294f0a3e61 189 PANTHER PTHR11839:SF1 1 185 4.4E-39 T 23-04-2016 UPTC3659_RS06255 587cfb0ab9b773b81494eb294f0a3e61 189 SUPERFAMILY SSF55811 2 186 6.77E-34 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 UPTC3659_RS06255 587cfb0ab9b773b81494eb294f0a3e61 189 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 4 171 1.3E-36 T 23-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 UPTC3659_RS06255 587cfb0ab9b773b81494eb294f0a3e61 189 Gene3D G3DSA:3.90.79.10 2 186 5.0E-45 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 UPTC3659_RS07340 48bb086f777409a6164a48578056ff6e 354 Gene3D G3DSA:3.40.50.2000 177 335 5.3E-19 T 23-04-2016 UPTC3659_RS07340 48bb086f777409a6164a48578056ff6e 354 SUPERFAMILY SSF53756 4 354 8.37E-64 T 23-04-2016 UPTC3659_RS07340 48bb086f777409a6164a48578056ff6e 354 PANTHER PTHR12526 1 79 1.1E-49 T 23-04-2016 UPTC3659_RS07340 48bb086f777409a6164a48578056ff6e 354 PANTHER PTHR12526 95 354 1.1E-49 T 23-04-2016 UPTC3659_RS07340 48bb086f777409a6164a48578056ff6e 354 Pfam PF00534 Glycosyl transferases group 1 179 335 2.0E-33 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 UPTC3659_RS04050 14cb88451a374da755d04f9cfc22d54a 111 Gene3D G3DSA:3.40.250.10 13 105 1.9E-16 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04050 14cb88451a374da755d04f9cfc22d54a 111 SMART SM00450 2 105 0.0018 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04050 14cb88451a374da755d04f9cfc22d54a 111 SUPERFAMILY SSF52821 10 106 5.24E-18 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04050 14cb88451a374da755d04f9cfc22d54a 111 Pfam PF00581 Rhodanese-like domain 12 99 5.1E-10 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS01545 fbc2d8ce03f6328ad94faf1d8373a5b9 265 PANTHER PTHR21496:SF10 76 260 2.6E-37 T 23-04-2016 UPTC3659_RS01545 fbc2d8ce03f6328ad94faf1d8373a5b9 265 Pfam PF04305 Protein of unknown function (DUF455) 16 255 9.1E-66 T 23-04-2016 IPR007402 Protein of unknown function DUF455 UPTC3659_RS01545 fbc2d8ce03f6328ad94faf1d8373a5b9 265 SUPERFAMILY SSF47240 73 226 2.85E-8 T 23-04-2016 IPR009078 Ferritin-like superfamily UPTC3659_RS01545 fbc2d8ce03f6328ad94faf1d8373a5b9 265 PANTHER PTHR21496 76 260 2.6E-37 T 23-04-2016 UPTC3659_RS01545 fbc2d8ce03f6328ad94faf1d8373a5b9 265 PIRSF PIRSF012318 1 265 1.8E-74 T 23-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 UPTC3659_RS05090 8bfa1b017608736e08d081f2fd878b18 171 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 3.3E-31 T 23-04-2016 IPR008514 Type VI secretion system effector, Hcp UPTC3659_RS05090 8bfa1b017608736e08d081f2fd878b18 171 Gene3D G3DSA:2.30.110.20 1 168 7.1E-33 T 23-04-2016 IPR008514 Type VI secretion system effector, Hcp UPTC3659_RS05090 8bfa1b017608736e08d081f2fd878b18 171 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 7.4E-60 T 23-04-2016 IPR008514 Type VI secretion system effector, Hcp UPTC3659_RS05090 8bfa1b017608736e08d081f2fd878b18 171 PANTHER PTHR34319 1 168 2.6E-60 T 23-04-2016 UPTC3659_RS05090 8bfa1b017608736e08d081f2fd878b18 171 SUPERFAMILY SSF141452 2 168 1.06E-39 T 23-04-2016 IPR008514 Type VI secretion system effector, Hcp UPTC3659_RS02405 5a4967a78fa76cebbddc819d65900655 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 220 6.7E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS02405 5a4967a78fa76cebbddc819d65900655 223 PANTHER PTHR30183 7 220 3.5E-56 T 23-04-2016 UPTC3659_RS02405 5a4967a78fa76cebbddc819d65900655 223 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 15 222 6.7E-69 T 23-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 UPTC3659_RS02405 5a4967a78fa76cebbddc819d65900655 223 SUPERFAMILY SSF161098 10 219 1.31E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS02405 5a4967a78fa76cebbddc819d65900655 223 Gene3D G3DSA:1.10.3720.10 10 217 4.3E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 844 167.638 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 2 823 8.2E-291 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 SUPERFAMILY SSF50447 445 539 3.88E-14 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 SUPERFAMILY SSF55681 2 239 9.94E-100 T 23-04-2016 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 PANTHER PTHR11777 2 845 0.0 T 23-04-2016 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 Gene3D G3DSA:3.30.930.10 2 235 2.1E-110 T 23-04-2016 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 Pfam PF02272 DHHA1 domain 772 836 6.9E-12 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 Pfam PF01411 tRNA synthetases class II (A) 2 542 1.7E-208 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 PANTHER PTHR11777:SF9 2 845 0.0 T 23-04-2016 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 SMART SM00863 640 682 1.2E-17 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 640 682 1.9E-15 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 SUPERFAMILY SSF101353 240 451 3.53E-62 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 SUPERFAMILY SSF55186 539 708 4.84E-48 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 9.5E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 220 233 9.5E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 292 305 9.5E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 193 204 9.5E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 UPTC3659_RS06455 2d7ad16c7aade10f42febdb3bbe4fb4a 845 PRINTS PR00980 Alanyl-tRNA synthetase signature 268 284 9.5E-30 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 UPTC3659_RS08190 58b3bb5b95ea1c728e23bf40902181c8 220 SUPERFAMILY SSF75217 71 218 2.65E-28 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases UPTC3659_RS08190 58b3bb5b95ea1c728e23bf40902181c8 220 Gene3D G3DSA:3.40.1280.10 9 216 1.8E-30 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UPTC3659_RS08190 58b3bb5b95ea1c728e23bf40902181c8 220 PANTHER PTHR30027 13 212 7.7E-19 T 23-04-2016 UPTC3659_RS08190 58b3bb5b95ea1c728e23bf40902181c8 220 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 217 2.1E-38 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS08190 58b3bb5b95ea1c728e23bf40902181c8 220 PANTHER PTHR30027:SF3 13 212 7.7E-19 T 23-04-2016 UPTC3659_RS08190 58b3bb5b95ea1c728e23bf40902181c8 220 PIRSF PIRSF015601 1 219 1.6E-36 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS08190 58b3bb5b95ea1c728e23bf40902181c8 220 Pfam PF04452 RNA methyltransferase 15 216 1.8E-35 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 Gene3D G3DSA:3.30.160.20 7 70 8.8E-30 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 SUPERFAMILY SSF54768 5 73 2.62E-23 T 23-04-2016 UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 Pfam PF03719 Ribosomal protein S5, C-terminal domain 85 146 1.2E-25 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 Pfam PF00333 Ribosomal protein S5, N-terminal domain 9 72 1.9E-28 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 PANTHER PTHR13718 7 146 3.1E-63 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 ProSitePatterns PS00585 Ribosomal protein S5 signature. 26 58 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 7 146 3.1E-64 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 Gene3D G3DSA:3.30.230.10 74 145 3.0E-30 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 SUPERFAMILY SSF54211 77 145 3.03E-23 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS00470 6e85302e77bcb2525c5748769ff7f3bf 147 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 147 31.276 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 PANTHER PTHR15184:SF9 1 430 1.4E-180 T 23-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 354 9.2E-70 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 PANTHER PTHR15184 1 430 1.4E-180 T 23-04-2016 UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 PRINTS PR00364 Disease resistance protein signature 425 436 7.4E-5 T 23-04-2016 UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 PRINTS PR00364 Disease resistance protein signature 243 257 7.4E-5 T 23-04-2016 UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 PRINTS PR00364 Disease resistance protein signature 160 175 7.4E-5 T 23-04-2016 UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 5 433 8.1E-175 T 23-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 SMART SM00382 157 338 5.1E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 Gene3D G3DSA:3.40.50.300 92 356 2.2E-87 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08470 275adc15577813fb8ad14554796138c2 436 SUPERFAMILY SSF52540 92 360 7.9E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 PRINTS PR00986 Valyl-tRNA synthetase signature 228 245 6.5E-26 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 PRINTS PR00986 Valyl-tRNA synthetase signature 343 356 6.5E-26 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 6.5E-26 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 PRINTS PR00986 Valyl-tRNA synthetase signature 439 460 6.5E-26 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 Gene3D G3DSA:3.90.740.10 192 334 1.1E-49 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 Gene3D G3DSA:1.10.287.380 803 868 3.9E-5 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 Pfam PF08264 Anticodon-binding domain of tRNA 609 735 2.5E-30 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 PANTHER PTHR11946 4 783 0.0 T 23-04-2016 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 PANTHER PTHR11946 800 864 0.0 T 23-04-2016 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 Gene3D G3DSA:3.40.50.620 5 191 9.4E-127 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 Gene3D G3DSA:3.40.50.620 338 555 9.4E-127 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 11 567 1.5E-180 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 809 868 4.4E-11 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 SUPERFAMILY SSF46589 804 868 1.05E-11 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 PANTHER PTHR11946:SF5 4 783 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 PANTHER PTHR11946:SF5 800 864 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 SUPERFAMILY SSF52374 338 577 4.61E-125 T 23-04-2016 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 SUPERFAMILY SSF52374 5 188 4.61E-125 T 23-04-2016 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 869 14.398 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 Gene3D G3DSA:1.10.730.10 556 711 1.3E-41 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 TIGRFAM TIGR00422 valS: valine--tRNA ligase 2 851 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 SUPERFAMILY SSF47323 579 788 1.87E-41 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03710 093276ea622a16d4d019d68f44007640 870 SUPERFAMILY SSF50677 188 338 1.7E-60 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 UPTC3659_RS00670 ff3cf03625d642f60823117193529c31 275 Pfam PF02470 MlaD protein 39 115 2.2E-14 T 23-04-2016 IPR003399 Mce/MlaD UPTC3659_RS00670 ff3cf03625d642f60823117193529c31 275 PANTHER PTHR36698:SF2 2 232 4.1E-46 T 23-04-2016 UPTC3659_RS00670 ff3cf03625d642f60823117193529c31 275 PANTHER PTHR36698 2 232 4.1E-46 T 23-04-2016 UPTC3659_RS02485 85781f03ce04c23011d58645c4f591de 217 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 143 215 4.6E-14 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 UPTC3659_RS02485 85781f03ce04c23011d58645c4f591de 217 Gene3D G3DSA:3.30.1150.10 120 216 7.5E-9 T 23-04-2016 UPTC3659_RS02485 85781f03ce04c23011d58645c4f591de 217 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 144 217 1.9E-18 T 23-04-2016 IPR006260 TonB, C-terminal GO:0006810 UPTC3659_RS02485 85781f03ce04c23011d58645c4f591de 217 SUPERFAMILY SSF74653 116 217 4.51E-11 T 23-04-2016 UPTC3659_RS02455 2d1e65527ef021b26303801fd9b7fb39 214 Pfam PF00717 Peptidase S24-like 132 192 1.2E-10 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B UPTC3659_RS02455 2d1e65527ef021b26303801fd9b7fb39 214 Gene3D G3DSA:2.10.109.10 127 208 7.4E-18 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain UPTC3659_RS02455 2d1e65527ef021b26303801fd9b7fb39 214 SUPERFAMILY SSF51306 128 207 7.72E-16 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C UPTC3659_RS07205 904241521eac6016b272a6189e786eec 387 Gene3D G3DSA:2.30.40.10 3 47 3.8E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 UPTC3659_RS07205 904241521eac6016b272a6189e786eec 387 Gene3D G3DSA:2.30.40.10 350 384 3.8E-11 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 UPTC3659_RS07205 904241521eac6016b272a6189e786eec 387 PANTHER PTHR11647 1 355 3.4E-47 T 23-04-2016 UPTC3659_RS07205 904241521eac6016b272a6189e786eec 387 Pfam PF01979 Amidohydrolase family 259 383 1.9E-9 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 UPTC3659_RS07205 904241521eac6016b272a6189e786eec 387 SUPERFAMILY SSF51556 48 342 2.54E-48 T 23-04-2016 IPR032466 Metal-dependent hydrolase UPTC3659_RS07205 904241521eac6016b272a6189e786eec 387 PANTHER PTHR11647:SF70 1 355 3.4E-47 T 23-04-2016 UPTC3659_RS07205 904241521eac6016b272a6189e786eec 387 SUPERFAMILY SSF51338 2 46 3.7E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 UPTC3659_RS07205 904241521eac6016b272a6189e786eec 387 SUPERFAMILY SSF51338 341 385 3.7E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 UPTC3659_RS07205 904241521eac6016b272a6189e786eec 387 Gene3D G3DSA:3.20.20.140 48 349 2.2E-42 T 23-04-2016 UPTC3659_RS05730 64df998bb80ce03d70568c813e54a5d2 506 PANTHER PTHR11101 21 289 1.5E-133 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 UPTC3659_RS05730 64df998bb80ce03d70568c813e54a5d2 506 PANTHER PTHR11101 331 503 1.5E-133 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 UPTC3659_RS05730 64df998bb80ce03d70568c813e54a5d2 506 Pfam PF01384 Phosphate transporter family 49 494 1.1E-113 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 471 4.8E-180 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 Pfam PF02934 GatB/GatE catalytic domain 4 287 9.5E-113 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 Pfam PF02637 GatB domain 324 471 4.3E-45 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 SUPERFAMILY SSF55931 3 295 7.85E-121 T 23-04-2016 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 PANTHER PTHR11659 2 471 7.6E-226 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 PANTHER PTHR11659:SF0 2 471 7.6E-226 T 23-04-2016 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 SMART SM00845 324 471 1.7E-65 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 SUPERFAMILY SSF89095 293 394 4.45E-24 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 140 154 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 UPTC3659_RS07215 7fdf75fb5443632fc9b8fb571e0cddc6 472 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 1 472 37.23 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 UPTC3659_RS01185 df83671639da47845aaa2649ed540068 89 Pfam PF04296 Protein of unknown function (DUF448) 9 70 2.4E-6 T 23-04-2016 IPR007393 Domain of unknown function DUF448 UPTC3659_RS01185 df83671639da47845aaa2649ed540068 89 SUPERFAMILY SSF64376 5 73 1.57E-8 T 23-04-2016 IPR007393 Domain of unknown function DUF448 UPTC3659_RS01185 df83671639da47845aaa2649ed540068 89 Gene3D G3DSA:3.30.1230.10 3 71 3.5E-7 T 23-04-2016 IPR007393 Domain of unknown function DUF448 UPTC3659_RS07480 249c857527196ade07591943ca6f3c6b 134 Pfam PF03061 Thioesterase superfamily 22 92 4.2E-18 T 23-04-2016 IPR006683 Thioesterase domain UPTC3659_RS07480 249c857527196ade07591943ca6f3c6b 134 Gene3D G3DSA:3.10.129.10 6 125 2.5E-36 T 23-04-2016 IPR029069 HotDog domain UPTC3659_RS07480 249c857527196ade07591943ca6f3c6b 134 SUPERFAMILY SSF54637 5 125 7.34E-35 T 23-04-2016 IPR029069 HotDog domain UPTC3659_RS07480 249c857527196ade07591943ca6f3c6b 134 PANTHER PTHR11049 9 124 1.8E-41 T 23-04-2016 UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 PANTHER PTHR30126:SF11 1 279 4.1E-65 T 23-04-2016 UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 Gene3D G3DSA:3.40.190.10 97 183 5.9E-10 T 23-04-2016 UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 SUPERFAMILY SSF46785 1 85 1.23E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 Pfam PF03466 LysR substrate binding domain 86 278 1.2E-25 T 23-04-2016 IPR005119 LysR, substrate-binding UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.0E-12 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 PANTHER PTHR30126 1 279 4.1E-65 T 23-04-2016 UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 Gene3D G3DSA:1.10.10.10 1 85 1.5E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-5 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 SUPERFAMILY SSF53850 89 279 2.41E-25 T 23-04-2016 UPTC3659_RS01420 e7b4898b5abedb2a49489c8fbd78cfc6 287 Gene3D G3DSA:3.40.190.10 184 249 4.8E-10 T 23-04-2016 UPTC3659_RS01390 cd882bb9ce9a6da0e3514517fa814169 594 Pfam PF11186 Protein of unknown function (DUF2972) 402 591 7.1E-36 T 23-04-2016 IPR021353 Protein of unknown function DUF2972 UPTC3659_RS08110 3433ebd9e028c10658cc5010f07cf261 304 Gene3D G3DSA:3.30.470.10 5 128 1.2E-36 T 23-04-2016 UPTC3659_RS08110 3433ebd9e028c10658cc5010f07cf261 304 Gene3D G3DSA:3.20.10.10 132 293 5.9E-57 T 23-04-2016 UPTC3659_RS08110 3433ebd9e028c10658cc5010f07cf261 304 Pfam PF01063 Amino-transferase class IV 34 265 1.6E-47 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 UPTC3659_RS08110 3433ebd9e028c10658cc5010f07cf261 304 PANTHER PTHR11825:SF7 7 303 2.9E-105 T 23-04-2016 UPTC3659_RS08110 3433ebd9e028c10658cc5010f07cf261 304 SUPERFAMILY SSF56752 5 301 3.66E-96 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 UPTC3659_RS08110 3433ebd9e028c10658cc5010f07cf261 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 8 304 5.7E-134 T 23-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 UPTC3659_RS08110 3433ebd9e028c10658cc5010f07cf261 304 PANTHER PTHR11825 7 303 2.9E-105 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 UPTC3659_RS04595 5d5ec2b95f450f3b7f54393484684db0 219 Pfam PF00072 Response regulator receiver domain 4 113 1.8E-18 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS04595 5d5ec2b95f450f3b7f54393484684db0 219 Gene3D G3DSA:1.10.10.10 131 218 2.4E-16 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS04595 5d5ec2b95f450f3b7f54393484684db0 219 Gene3D G3DSA:3.40.50.2300 1 130 1.2E-28 T 23-04-2016 UPTC3659_RS04595 5d5ec2b95f450f3b7f54393484684db0 219 PANTHER PTHR26402:SF50 2 218 3.5E-49 T 23-04-2016 UPTC3659_RS04595 5d5ec2b95f450f3b7f54393484684db0 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 218 9.9E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS04595 5d5ec2b95f450f3b7f54393484684db0 219 SMART SM00448 2 113 5.4E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS04595 5d5ec2b95f450f3b7f54393484684db0 219 SMART SM00862 146 218 5.3E-10 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS04595 5d5ec2b95f450f3b7f54393484684db0 219 PANTHER PTHR26402 2 218 3.5E-49 T 23-04-2016 UPTC3659_RS04595 5d5ec2b95f450f3b7f54393484684db0 219 SUPERFAMILY SSF52172 1 180 3.42E-30 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS00720 2ac796968434df52b3e195cc35a8c9d1 139 Pfam PF06518 Protein of unknown function (DUF1104) 22 110 2.3E-20 T 23-04-2016 IPR009488 Protein of unknown function DUF1104 UPTC3659_RS08840 7347efa1d8354f5e2f97bb4c0f993ee6 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.6E-18 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS08840 7347efa1d8354f5e2f97bb4c0f993ee6 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 14.8 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS08840 7347efa1d8354f5e2f97bb4c0f993ee6 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.2E-7 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS08840 7347efa1d8354f5e2f97bb4c0f993ee6 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.2E-7 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS08840 7347efa1d8354f5e2f97bb4c0f993ee6 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.2E-7 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS08840 7347efa1d8354f5e2f97bb4c0f993ee6 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.2E-7 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS08840 7347efa1d8354f5e2f97bb4c0f993ee6 70 Pfam PF01165 Ribosomal protein S21 4 56 2.4E-15 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS08840 7347efa1d8354f5e2f97bb4c0f993ee6 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 54 2.0E-15 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS08695 7ab2a63198f92230066fc417c03b99f8 142 PANTHER PTHR22924:SF49 6 141 1.5E-35 T 23-04-2016 UPTC3659_RS08695 7ab2a63198f92230066fc417c03b99f8 142 Pfam PF00042 Globin 5 102 1.0E-12 T 23-04-2016 IPR000971 Globin GO:0019825|GO:0020037 UPTC3659_RS08695 7ab2a63198f92230066fc417c03b99f8 142 SUPERFAMILY SSF46458 1 139 8.81E-36 T 23-04-2016 IPR009050 Globin-like UPTC3659_RS08695 7ab2a63198f92230066fc417c03b99f8 142 PANTHER PTHR22924 6 141 1.5E-35 T 23-04-2016 UPTC3659_RS08695 7ab2a63198f92230066fc417c03b99f8 142 Gene3D G3DSA:1.10.490.10 1 139 7.7E-49 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 UPTC3659_RS08930 dc7ff2953f5621c18b2e12ac3937587b 192 Pfam PF01464 Transglycosylase SLT domain 40 133 9.3E-11 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 UPTC3659_RS08930 dc7ff2953f5621c18b2e12ac3937587b 192 Gene3D G3DSA:1.10.530.10 34 137 3.1E-14 T 23-04-2016 UPTC3659_RS08930 dc7ff2953f5621c18b2e12ac3937587b 192 SUPERFAMILY SSF53955 40 156 3.49E-24 T 23-04-2016 IPR023346 Lysozyme-like domain UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 SUPERFAMILY SSF63380 1 83 8.5E-14 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 PANTHER PTHR21098:SF0 1 199 9.5E-50 T 23-04-2016 UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 191 1.3E-55 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 SUPERFAMILY SSF63380 83 185 8.5E-29 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 PIRSF PIRSF000498 1 200 1.8E-59 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 PANTHER PTHR21098 1 199 9.5E-50 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 Pfam PF00677 Lumazine binding domain 90 174 3.8E-17 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 Pfam PF00677 Lumazine binding domain 4 75 1.2E-9 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 Gene3D G3DSA:2.40.30.20 27 94 1.9E-16 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS06605 0c962f3cb54abc988d9c2e8c500486c4 202 Gene3D G3DSA:2.40.30.20 95 185 1.4E-27 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS03795 df605234e32721d29795247bf00e94d0 340 PANTHER PTHR30307 7 340 2.4E-115 T 23-04-2016 UPTC3659_RS03795 df605234e32721d29795247bf00e94d0 340 SUPERFAMILY SSF111337 9 340 4.05E-111 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS03795 df605234e32721d29795247bf00e94d0 340 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 8 340 2.5E-118 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS03795 df605234e32721d29795247bf00e94d0 340 Pfam PF02547 Queuosine biosynthesis protein 8 339 5.4E-106 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS03795 df605234e32721d29795247bf00e94d0 340 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 6 340 37.976 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS03795 df605234e32721d29795247bf00e94d0 340 Gene3D G3DSA:3.40.1780.10 7 66 3.9E-74 T 23-04-2016 UPTC3659_RS03795 df605234e32721d29795247bf00e94d0 340 Gene3D G3DSA:3.40.1780.10 186 340 3.9E-74 T 23-04-2016 UPTC3659_RS03795 df605234e32721d29795247bf00e94d0 340 PANTHER PTHR30307:SF0 7 340 2.4E-115 T 23-04-2016 UPTC3659_RS03795 df605234e32721d29795247bf00e94d0 340 Gene3D G3DSA:2.40.10.240 68 139 3.1E-14 T 23-04-2016 UPTC3659_RS02555 27408f203ac4c2d5477d2da9b5b7f17d 448 Gene3D G3DSA:3.50.50.60 4 56 1.6E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS02555 27408f203ac4c2d5477d2da9b5b7f17d 448 Gene3D G3DSA:3.50.50.60 100 284 1.6E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS02555 27408f203ac4c2d5477d2da9b5b7f17d 448 PANTHER PTHR13847 6 256 1.7E-16 T 23-04-2016 UPTC3659_RS02555 27408f203ac4c2d5477d2da9b5b7f17d 448 SUPERFAMILY SSF51905 4 250 1.05E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS02555 27408f203ac4c2d5477d2da9b5b7f17d 448 SUPERFAMILY SSF51905 405 436 1.05E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS02555 27408f203ac4c2d5477d2da9b5b7f17d 448 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 5 417 3.6E-25 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 UPTC3659_RS07510 cf73940030a9020e7851863f29f22b76 347 Pfam PF01594 Domain of unknown function DUF20 7 338 4.2E-42 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like UPTC3659_RS07510 cf73940030a9020e7851863f29f22b76 347 PANTHER PTHR21716 1 344 1.6E-37 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like UPTC3659_RS07510 cf73940030a9020e7851863f29f22b76 347 PANTHER PTHR21716:SF13 1 344 1.6E-37 T 23-04-2016 UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 98 112 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 88 324 2.6E-13 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 Gene3D G3DSA:3.40.50.1100 197 422 3.8E-71 T 23-04-2016 UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 Gene3D G3DSA:3.90.1380.10 1 79 2.8E-13 T 23-04-2016 IPR029144 Threonine synthase, N-terminal UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 TIGRFAM TIGR00260 thrC: threonine synthase 67 413 5.2E-77 T 23-04-2016 IPR004450 Threonine synthase-like UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 PANTHER PTHR10314 25 328 4.6E-78 T 23-04-2016 UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 PANTHER PTHR10314 357 449 4.6E-78 T 23-04-2016 UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 Pfam PF14821 Threonine synthase N terminus 5 60 8.3E-9 T 23-04-2016 IPR029144 Threonine synthase, N-terminal UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 SUPERFAMILY SSF53686 1 467 3.91E-123 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 Gene3D G3DSA:3.40.50.1100 115 196 2.8E-8 T 23-04-2016 UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 PANTHER PTHR10314:SF1 25 328 4.6E-78 T 23-04-2016 UPTC3659_RS05575 64da9fe2c01d775e1df7e317f27e659b 469 PANTHER PTHR10314:SF1 357 449 4.6E-78 T 23-04-2016 UPTC3659_RS01565 c3a1fcc6b4c388468cb814ec3709fa41 552 PANTHER PTHR33619 58 495 4.4E-32 T 23-04-2016 UPTC3659_RS01565 c3a1fcc6b4c388468cb814ec3709fa41 552 Gene3D G3DSA:3.10.560.10 155 236 8.7E-10 T 23-04-2016 UPTC3659_RS01565 c3a1fcc6b4c388468cb814ec3709fa41 552 Gene3D G3DSA:3.10.560.10 439 511 3.0E-11 T 23-04-2016 UPTC3659_RS01565 c3a1fcc6b4c388468cb814ec3709fa41 552 PANTHER PTHR33619:SF1 58 495 4.4E-32 T 23-04-2016 UPTC3659_RS01565 c3a1fcc6b4c388468cb814ec3709fa41 552 Pfam PF02563 Polysaccharide biosynthesis/export protein 78 147 6.3E-12 T 23-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 UPTC3659_RS01565 c3a1fcc6b4c388468cb814ec3709fa41 552 Pfam PF10531 SLBB domain 453 499 5.8E-4 T 23-04-2016 IPR019554 Soluble ligand binding domain UPTC3659_RS01565 c3a1fcc6b4c388468cb814ec3709fa41 552 Pfam PF10531 SLBB domain 159 208 0.0016 T 23-04-2016 IPR019554 Soluble ligand binding domain UPTC3659_RS01565 c3a1fcc6b4c388468cb814ec3709fa41 552 Gene3D G3DSA:3.30.1950.10 85 143 1.7E-8 T 23-04-2016 UPTC3659_RS06335 cca45f1121c7175e1d223e01d9e6ea74 91 PANTHER PTHR33909 1 91 4.3E-22 T 23-04-2016 UPTC3659_RS06335 cca45f1121c7175e1d223e01d9e6ea74 91 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 8 89 1.1E-29 T 23-04-2016 IPR003849 Preprotein translocase YajC UPTC3659_RS06335 cca45f1121c7175e1d223e01d9e6ea74 91 PANTHER PTHR33909:SF1 1 91 4.3E-22 T 23-04-2016 UPTC3659_RS06335 cca45f1121c7175e1d223e01d9e6ea74 91 SMART SM01323 6 89 1.1E-40 T 23-04-2016 IPR003849 Preprotein translocase YajC UPTC3659_RS06335 cca45f1121c7175e1d223e01d9e6ea74 91 PRINTS PR01853 Bacterial YajC preprotein translocase signature 28 46 7.2E-15 T 23-04-2016 IPR003849 Preprotein translocase YajC UPTC3659_RS06335 cca45f1121c7175e1d223e01d9e6ea74 91 PRINTS PR01853 Bacterial YajC preprotein translocase signature 8 28 7.2E-15 T 23-04-2016 IPR003849 Preprotein translocase YajC UPTC3659_RS06335 cca45f1121c7175e1d223e01d9e6ea74 91 Pfam PF02699 Preprotein translocase subunit 10 87 3.3E-29 T 23-04-2016 IPR003849 Preprotein translocase YajC UPTC3659_RS02665 5785e711125c3bcaf941ee54193fbaa7 183 Gene3D G3DSA:3.40.50.150 22 142 6.9E-17 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS02665 5785e711125c3bcaf941ee54193fbaa7 183 PANTHER PTHR11727:SF14 33 112 6.4E-12 T 23-04-2016 UPTC3659_RS02665 5785e711125c3bcaf941ee54193fbaa7 183 SUPERFAMILY SSF53335 3 147 4.9E-20 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS02665 5785e711125c3bcaf941ee54193fbaa7 183 Pfam PF13649 Methyltransferase domain 37 135 3.2E-9 T 23-04-2016 UPTC3659_RS02665 5785e711125c3bcaf941ee54193fbaa7 183 PANTHER PTHR11727 33 112 6.4E-12 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm UPTC3659_RS00225 2c927b9fe2e4d8811dbf55f30c633545 546 SUPERFAMILY SSF52540 86 287 5.54E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00225 2c927b9fe2e4d8811dbf55f30c633545 546 Gene3D G3DSA:3.40.50.300 76 291 1.2E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00225 2c927b9fe2e4d8811dbf55f30c633545 546 Pfam PF00350 Dynamin family 137 236 2.4E-7 T 23-04-2016 IPR022812 Dynamin superfamily UPTC3659_RS00920 fd14a52faee45892c51a049b7767c5f9 600 Gene3D G3DSA:3.90.1480.10 192 462 1.5E-13 T 23-04-2016 UPTC3659_RS00920 fd14a52faee45892c51a049b7767c5f9 600 SUPERFAMILY SSF63999 178 268 8.11E-6 T 23-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 UPTC3659_RS00920 fd14a52faee45892c51a049b7767c5f9 600 Pfam PF01973 Protein of unknown function DUF115 176 342 1.6E-37 T 23-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like UPTC3659_RS00920 fd14a52faee45892c51a049b7767c5f9 600 PANTHER PTHR41786 35 570 8.4E-16 T 23-04-2016 UPTC3659_RS00920 fd14a52faee45892c51a049b7767c5f9 600 PANTHER PTHR41786:SF1 35 570 8.4E-16 T 23-04-2016 UPTC3659_RS02545 924b3cad3a15fff731e9813a7ede9beb 186 Gene3D G3DSA:3.40.50.10490 2 185 6.3E-63 T 23-04-2016 UPTC3659_RS02545 924b3cad3a15fff731e9813a7ede9beb 186 PANTHER PTHR30390 1 185 3.8E-78 T 23-04-2016 UPTC3659_RS02545 924b3cad3a15fff731e9813a7ede9beb 186 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 186 37.879 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 UPTC3659_RS02545 924b3cad3a15fff731e9813a7ede9beb 186 PANTHER PTHR30390:SF6 1 185 3.8E-78 T 23-04-2016 UPTC3659_RS02545 924b3cad3a15fff731e9813a7ede9beb 186 Pfam PF13580 SIS domain 14 143 5.4E-30 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 UPTC3659_RS02545 924b3cad3a15fff731e9813a7ede9beb 186 SUPERFAMILY SSF53697 1 184 5.56E-53 T 23-04-2016 UPTC3659_RS02545 924b3cad3a15fff731e9813a7ede9beb 186 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 36 183 2.5E-67 T 23-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 SUPERFAMILY SSF53187 1 154 3.14E-42 T 23-04-2016 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 SUPERFAMILY SSF53187 338 421 3.14E-42 T 23-04-2016 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 Gene3D G3DSA:3.40.630.10 2 153 1.1E-61 T 23-04-2016 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 Gene3D G3DSA:3.40.630.10 338 421 1.1E-61 T 23-04-2016 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 PRINTS PR00934 X-His dipeptidase (M25) signature 78 96 6.8E-7 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 PRINTS PR00934 X-His dipeptidase (M25) signature 176 193 6.8E-7 T 23-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 Pfam PF01546 Peptidase family M20/M25/M40 57 419 2.0E-10 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 PANTHER PTHR11014:SF54 325 421 4.6E-69 T 23-04-2016 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 PANTHER PTHR11014:SF54 174 256 4.6E-69 T 23-04-2016 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 PANTHER PTHR11014:SF54 1 157 4.6E-69 T 23-04-2016 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 PANTHER PTHR11014 325 421 4.6E-69 T 23-04-2016 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 PANTHER PTHR11014 174 256 4.6E-69 T 23-04-2016 UPTC3659_RS03000 52f908c60fb2056de641969b9bbfc389 422 PANTHER PTHR11014 1 157 4.6E-69 T 23-04-2016 UPTC3659_RS07435 950870069554451c4c40c92e025b4965 278 PIRSF PIRSF000401 9 277 1.1E-60 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 UPTC3659_RS07435 950870069554451c4c40c92e025b4965 278 Gene3D G3DSA:3.40.50.150 106 268 2.4E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07435 950870069554451c4c40c92e025b4965 278 SUPERFAMILY SSF53335 52 268 9.33E-33 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07435 950870069554451c4c40c92e025b4965 278 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 5 275 28.149 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 UPTC3659_RS07435 950870069554451c4c40c92e025b4965 278 PANTHER PTHR18895 1 276 1.0E-41 T 23-04-2016 UPTC3659_RS07435 950870069554451c4c40c92e025b4965 278 PANTHER PTHR18895:SF3 1 276 1.0E-41 T 23-04-2016 UPTC3659_RS07435 950870069554451c4c40c92e025b4965 278 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 46 275 1.9E-55 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 Pfam PF03477 ATP cone domain 2 88 2.8E-16 T 23-04-2016 IPR005144 ATP-cone domain UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PANTHER PTHR11573 492 770 3.7E-278 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 638 660 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 SUPERFAMILY SSF51998 212 445 6.87E-174 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 SUPERFAMILY SSF51998 490 770 6.87E-174 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 Gene3D G3DSA:3.20.70.20 493 593 1.7E-73 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 Gene3D G3DSA:3.20.70.20 385 431 1.7E-73 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 Gene3D G3DSA:3.20.70.20 124 334 1.7E-73 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 Gene3D G3DSA:3.20.70.20 649 770 1.7E-73 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 138 768 1.3E-186 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PANTHER PTHR11573 3 435 3.7E-278 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 507 530 6.5E-41 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 419 430 6.5E-41 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 649 676 6.5E-41 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 596 6.5E-41 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 288 307 6.5E-41 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PRINTS PR01183 Ribonucleotide reductase large chain signature 545 567 6.5E-41 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 SUPERFAMILY SSF48168 6 211 3.01E-67 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PANTHER PTHR11573:SF6 3 435 3.7E-278 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 135 208 1.8E-24 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 PANTHER PTHR11573:SF6 492 770 3.7E-278 T 23-04-2016 UPTC3659_RS00150 5d5d323f8b891675d175e032b010e444 791 Pfam PF02867 Ribonucleotide reductase, barrel domain 213 765 2.2E-166 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS00545 9cc97799c348baae72c666379ae4cf1f 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 25.682 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 UPTC3659_RS00545 9cc97799c348baae72c666379ae4cf1f 72 SUPERFAMILY SSF50249 1 71 1.01E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS00545 9cc97799c348baae72c666379ae4cf1f 72 Gene3D G3DSA:2.40.50.140 2 72 2.7E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS00545 9cc97799c348baae72c666379ae4cf1f 72 PANTHER PTHR33370 2 72 4.7E-41 T 23-04-2016 UPTC3659_RS00545 9cc97799c348baae72c666379ae4cf1f 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 4.4E-34 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 UPTC3659_RS00545 9cc97799c348baae72c666379ae4cf1f 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 4.0E-27 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 UPTC3659_RS05865 419dcefe6e8c1251919e797d29cae895 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 12 204 4.7E-32 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 UPTC3659_RS05865 419dcefe6e8c1251919e797d29cae895 213 PANTHER PTHR33508 5 213 7.3E-36 T 23-04-2016 UPTC3659_RS05865 419dcefe6e8c1251919e797d29cae895 213 PANTHER PTHR33508:SF1 5 213 7.3E-36 T 23-04-2016 UPTC3659_RS05865 419dcefe6e8c1251919e797d29cae895 213 Pfam PF01914 MarC family integral membrane protein 12 207 2.5E-32 T 23-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 SMART SM00283 464 655 4.4E-26 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 SUPERFAMILY SSF58104 456 653 8.76E-49 T 23-04-2016 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 SUPERFAMILY SSF58104 337 367 8.76E-49 T 23-04-2016 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 Gene3D G3DSA:1.10.287.950 456 647 4.0E-44 T 23-04-2016 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 PANTHER PTHR32089 401 421 1.5E-53 T 23-04-2016 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 PANTHER PTHR32089 467 647 1.5E-53 T 23-04-2016 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 PANTHER PTHR32089 1 347 1.5E-53 T 23-04-2016 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 Gene3D G3DSA:3.30.450.20 74 175 4.8E-17 T 23-04-2016 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 Pfam PF02743 Cache domain 45 223 5.8E-19 T 23-04-2016 IPR033479 Double Cache domain 1 UPTC3659_RS07730 241fe1bc10a39bc265cedce58cb7cd91 656 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 511 593 3.6E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 Pfam PF01256 Carbohydrate kinase 234 441 1.2E-33 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 Gene3D G3DSA:3.40.1190.20 203 443 3.6E-45 T 23-04-2016 IPR029056 Ribokinase-like UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 Pfam PF03853 YjeF-related protein N-terminus 25 170 1.7E-28 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 PANTHER PTHR12592:SF0 19 445 1.9E-52 T 23-04-2016 UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 202 445 1.1E-41 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 PANTHER PTHR12592 19 445 1.9E-52 T 23-04-2016 UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 391 401 - T 23-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 193 1.4E-33 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 PIRSF PIRSF017184 3 447 1.5E-81 T 23-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 SUPERFAMILY SSF53613 210 445 4.43E-39 T 23-04-2016 IPR029056 Ribokinase-like UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 Gene3D G3DSA:3.40.50.10260 11 196 1.2E-41 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 UPTC3659_RS08425 cfc0422592114cd0ebcd9fb6d012d0e8 448 SUPERFAMILY SSF64153 10 225 9.29E-42 T 23-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 Gene3D G3DSA:3.40.1690.10 216 352 1.7E-59 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 PANTHER PTHR30531:SF0 1 358 4.3E-123 T 23-04-2016 UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 SUPERFAMILY SSF160544 242 348 4.84E-40 T 23-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 1.0E-42 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 206 224 1.0E-42 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 300 321 1.0E-42 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 270 285 1.0E-42 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 226 243 1.0E-42 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 351 5.7E-134 T 23-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 PANTHER PTHR30531 1 358 4.3E-123 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UPTC3659_RS07725 9722f09e8ce3b00b59f44f306af5c257 358 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 345 1.7E-123 T 23-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UPTC3659_RS08515 8d30134c80410451bd04ea256bfba616 208 PANTHER PTHR30506:SF2 1 208 3.9E-101 T 23-04-2016 UPTC3659_RS08515 8d30134c80410451bd04ea256bfba616 208 Pfam PF03458 UPF0126 domain 5 76 6.1E-19 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 UPTC3659_RS08515 8d30134c80410451bd04ea256bfba616 208 Pfam PF03458 UPF0126 domain 91 164 1.3E-20 T 23-04-2016 IPR005115 Uncharacterised domain UPF0126 UPTC3659_RS08515 8d30134c80410451bd04ea256bfba616 208 PANTHER PTHR30506 1 208 3.9E-101 T 23-04-2016 UPTC3659_RS00855 e4d4f784195caf4185dbf671783877ed 287 Pfam PF02621 Menaquinone biosynthesis 5 260 3.4E-70 T 23-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 UPTC3659_RS00855 e4d4f784195caf4185dbf671783877ed 287 PANTHER PTHR37167 3 279 2.5E-45 T 23-04-2016 UPTC3659_RS00855 e4d4f784195caf4185dbf671783877ed 287 SUPERFAMILY SSF53850 5 265 3.53E-71 T 23-04-2016 UPTC3659_RS00855 e4d4f784195caf4185dbf671783877ed 287 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 4 267 34.059 T 23-04-2016 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 UniPathway: UPA00079 UPTC3659_RS00980 653f057a8d825a94766ad24f79abdddd 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 202 1.1E-48 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 UPTC3659_RS00980 653f057a8d825a94766ad24f79abdddd 203 SMART SM01207 8 195 2.6E-65 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 UPTC3659_RS00980 653f057a8d825a94766ad24f79abdddd 203 PANTHER PTHR30309 1 202 5.2E-48 T 23-04-2016 UPTC3659_RS00980 653f057a8d825a94766ad24f79abdddd 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 203 17.67 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 UPTC3659_RS00980 653f057a8d825a94766ad24f79abdddd 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 194 1.4E-40 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 UPTC3659_RS00980 653f057a8d825a94766ad24f79abdddd 203 PANTHER PTHR30309:SF0 1 202 5.2E-48 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 UPTC3659_RS03995 b2bafb38c52f23f1818871723a7f1008 406 PANTHER PTHR23508:SF5 6 379 1.1E-106 T 23-04-2016 UPTC3659_RS03995 b2bafb38c52f23f1818871723a7f1008 406 PANTHER PTHR23508 6 379 1.1E-106 T 23-04-2016 UPTC3659_RS03995 b2bafb38c52f23f1818871723a7f1008 406 Pfam PF07690 Major Facilitator Superfamily 52 370 1.4E-21 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS03995 b2bafb38c52f23f1818871723a7f1008 406 SUPERFAMILY SSF103473 6 402 6.67E-54 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS03995 b2bafb38c52f23f1818871723a7f1008 406 Gene3D G3DSA:1.20.1250.20 229 398 2.2E-13 T 23-04-2016 UPTC3659_RS03995 b2bafb38c52f23f1818871723a7f1008 406 Gene3D G3DSA:1.20.1250.20 6 213 2.7E-19 T 23-04-2016 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 99 4.8E-31 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 10 474 2.7E-189 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 PANTHER PTHR20852:SF15 166 476 8.2E-205 T 23-04-2016 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 PANTHER PTHR20852:SF15 7 143 8.2E-205 T 23-04-2016 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 SUPERFAMILY SSF55931 108 475 4.61E-118 T 23-04-2016 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 SUPERFAMILY SSF54368 8 106 1.02E-33 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 PANTHER PTHR20852 166 476 8.2E-205 T 23-04-2016 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 PANTHER PTHR20852 7 143 8.2E-205 T 23-04-2016 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 Pfam PF00120 Glutamine synthetase, catalytic domain 108 471 4.6E-122 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 Gene3D G3DSA:3.10.20.70 8 110 1.2E-34 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 Gene3D G3DSA:3.30.590.10 111 455 2.2E-119 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 264 279 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UPTC3659_RS06130 ef991824b8cdeeb9564fc7f1ad0f59d9 476 SMART SM01230 107 385 9.6E-128 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 SUPERFAMILY SSF51604 138 403 2.58E-113 T 23-04-2016 IPR029065 Enolase C-terminal domain-like UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 ProSitePatterns PS00164 Enolase signature. 329 342 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 PIRSF PIRSF001400 1 413 3.4E-179 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 404 6.6E-189 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 404 1.1E-110 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 SMART SM01192 138 414 6.5E-186 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 PANTHER PTHR11902 1 413 1.6E-220 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 Hamap MF_00318 Enolase [eno]. 2 406 42.089 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 Pfam PF03952 Enolase, N-terminal domain 4 133 2.8E-53 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 Gene3D G3DSA:3.30.390.10 4 124 5.2E-48 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 Gene3D G3DSA:3.20.20.120 127 405 8.5E-123 T 23-04-2016 IPR029065 Enolase C-terminal domain-like UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 SMART SM01193 4 133 2.3E-83 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 PRINTS PR00148 Enolase signature 329 343 5.9E-40 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 PRINTS PR00148 Enolase signature 306 317 5.9E-40 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 PRINTS PR00148 Enolase signature 106 122 5.9E-40 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 PRINTS PR00148 Enolase signature 160 173 5.9E-40 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 PRINTS PR00148 Enolase signature 358 375 5.9E-40 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 PRINTS PR00148 Enolase signature 37 51 5.9E-40 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 UPTC3659_RS00845 003d21c7f16e56e9090dbc039058e31c 414 SUPERFAMILY SSF54826 4 135 1.15E-50 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UPTC3659_RS03940 015172adcd93c73924f13e962895ff6a 183 PANTHER PTHR24421 2 177 1.2E-23 T 23-04-2016 UPTC3659_RS03940 015172adcd93c73924f13e962895ff6a 183 Pfam PF01339 CheB methylesterase 4 175 4.5E-34 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 UPTC3659_RS03940 015172adcd93c73924f13e962895ff6a 183 Gene3D G3DSA:3.40.50.180 2 182 2.8E-38 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 UPTC3659_RS03940 015172adcd93c73924f13e962895ff6a 183 PANTHER PTHR24421:SF16 2 177 1.2E-23 T 23-04-2016 UPTC3659_RS03940 015172adcd93c73924f13e962895ff6a 183 SUPERFAMILY SSF52738 2 182 4.45E-41 T 23-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 UPTC3659_RS04285 f2f11e228a5f0ecb83e5f89f97b98b51 311 PANTHER PTHR30472 1 311 3.9E-109 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 UPTC3659_RS04285 f2f11e228a5f0ecb83e5f89f97b98b51 311 Pfam PF01032 FecCD transport family 28 307 2.2E-44 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 UPTC3659_RS04285 f2f11e228a5f0ecb83e5f89f97b98b51 311 SUPERFAMILY SSF81345 6 307 4.84E-52 T 23-04-2016 IPR029022 ABC transporter, BtuC-like UPTC3659_RS04285 f2f11e228a5f0ecb83e5f89f97b98b51 311 Gene3D G3DSA:1.10.3470.10 26 309 1.8E-48 T 23-04-2016 IPR029022 ABC transporter, BtuC-like UPTC3659_RS04285 f2f11e228a5f0ecb83e5f89f97b98b51 311 PANTHER PTHR30472:SF19 1 311 3.9E-109 T 23-04-2016 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 Gene3D G3DSA:3.40.1190.20 5 259 1.7E-73 T 23-04-2016 IPR029056 Ribokinase-like UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 SUPERFAMILY SSF53613 4 258 1.75E-51 T 23-04-2016 IPR029056 Ribokinase-like UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 PANTHER PTHR20857 2 260 8.9E-59 T 23-04-2016 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 Pfam PF02110 Hydroxyethylthiazole kinase family 5 249 9.6E-70 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 11 18 1.8E-26 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 81 98 1.8E-26 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 157 174 1.8E-26 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 112 126 1.8E-26 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 24 45 1.8E-26 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 55 63 1.8E-26 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 PANTHER PTHR20857:SF19 2 260 8.9E-59 T 23-04-2016 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 4 252 27.274 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06720 17f7b30fb2e2f1c277c91ab893e88a06 260 PIRSF PIRSF000513 1 260 5.3E-75 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS05815 ce411d38801009818cab569b752ca16c 297 PANTHER PTHR22807 20 296 1.1E-61 T 23-04-2016 UPTC3659_RS05815 ce411d38801009818cab569b752ca16c 297 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 238 2.4E-23 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS05815 ce411d38801009818cab569b752ca16c 297 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 80 94 2.4E-23 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS05815 ce411d38801009818cab569b752ca16c 297 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 279 296 2.4E-23 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS05815 ce411d38801009818cab569b752ca16c 297 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 109 119 2.4E-23 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS05815 ce411d38801009818cab569b752ca16c 297 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 176 188 2.4E-23 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS05815 ce411d38801009818cab569b752ca16c 297 Pfam PF01189 16S rRNA methyltransferase RsmB/F 99 294 1.1E-42 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS05815 ce411d38801009818cab569b752ca16c 297 SUPERFAMILY SSF53335 17 296 1.12E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS05815 ce411d38801009818cab569b752ca16c 297 Gene3D G3DSA:3.40.50.150 92 296 4.2E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS04440 57db949fad50c5c0cdc6d8def84a0e7d 297 PANTHER PTHR12001 27 297 4.1E-71 T 23-04-2016 IPR017446 Polyprenyl synthetase-related UPTC3659_RS04440 57db949fad50c5c0cdc6d8def84a0e7d 297 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 63 77 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 UPTC3659_RS04440 57db949fad50c5c0cdc6d8def84a0e7d 297 Gene3D G3DSA:1.10.600.10 5 296 4.6E-87 T 23-04-2016 IPR008949 Isoprenoid synthase domain UPTC3659_RS04440 57db949fad50c5c0cdc6d8def84a0e7d 297 SUPERFAMILY SSF48576 23 295 1.42E-73 T 23-04-2016 IPR008949 Isoprenoid synthase domain UPTC3659_RS04440 57db949fad50c5c0cdc6d8def84a0e7d 297 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 181 193 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 UPTC3659_RS04440 57db949fad50c5c0cdc6d8def84a0e7d 297 Pfam PF00348 Polyprenyl synthetase 27 244 5.6E-60 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 296 413 7.3E-18 T 23-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 SUPERFAMILY SSF56524 54 297 2.22E-57 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 Gene3D G3DSA:2.60.40.650 301 413 1.1E-30 T 23-04-2016 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 SUPERFAMILY SSF81296 301 414 3.15E-30 T 23-04-2016 IPR014756 Immunoglobulin E-set UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 Gene3D G3DSA:3.90.420.10 54 297 4.8E-61 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 Pfam PF00174 Oxidoreductase molybdopterin binding domain 106 269 8.3E-43 T 23-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 PRINTS PR00407 Eukaryotic molybdopterin domain signature 80 96 2.5E-12 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 PRINTS PR00407 Eukaryotic molybdopterin domain signature 251 264 2.5E-12 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 PRINTS PR00407 Eukaryotic molybdopterin domain signature 396 409 2.5E-12 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 PRINTS PR00407 Eukaryotic molybdopterin domain signature 140 151 2.5E-12 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 PRINTS PR00407 Eukaryotic molybdopterin domain signature 298 310 2.5E-12 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 PRINTS PR00407 Eukaryotic molybdopterin domain signature 382 394 2.5E-12 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 PRINTS PR00407 Eukaryotic molybdopterin domain signature 337 349 2.5E-12 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 PRINTS PR00407 Eukaryotic molybdopterin domain signature 235 248 2.5E-12 T 23-04-2016 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS00060 75a66842285338210140e73897546e1a 416 PANTHER PTHR19372 59 414 2.1E-78 T 23-04-2016 UPTC3659_RS05535 cc53d63a583c89efa7fdc3b812e20056 188 Gene3D G3DSA:3.40.50.880 1 186 5.0E-50 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS05535 cc53d63a583c89efa7fdc3b812e20056 188 PANTHER PTHR11019:SF4 1 184 1.5E-38 T 23-04-2016 UPTC3659_RS05535 cc53d63a583c89efa7fdc3b812e20056 188 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 180 1.7E-55 T 23-04-2016 IPR006287 DJ-1 UPTC3659_RS05535 cc53d63a583c89efa7fdc3b812e20056 188 Pfam PF01965 DJ-1/PfpI family 2 167 8.3E-34 T 23-04-2016 IPR002818 DJ-1/PfpI UPTC3659_RS05535 cc53d63a583c89efa7fdc3b812e20056 188 SUPERFAMILY SSF52317 1 185 2.62E-43 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS05535 cc53d63a583c89efa7fdc3b812e20056 188 PANTHER PTHR11019 1 184 1.5E-38 T 23-04-2016 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 8 328 5.7E-46 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PANTHER PTHR12428 148 509 4.2E-88 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PANTHER PTHR12428:SF14 148 509 4.2E-88 T 23-04-2016 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 9 511 21.118 T 23-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 Pfam PF02096 60Kd inner membrane protein 330 509 3.1E-62 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 Pfam PF14849 YidC periplasmic domain 249 318 2.4E-10 T 23-04-2016 IPR028053 Membrane insertase YidC, N-terminal UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PRINTS PR00701 60kDa inner membrane protein signature 438 460 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PRINTS PR00701 60kDa inner membrane protein signature 475 498 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PRINTS PR00701 60kDa inner membrane protein signature 391 414 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PRINTS PR00701 60kDa inner membrane protein signature 300 320 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PRINTS PR00701 60kDa inner membrane protein signature 7 28 1.6E-40 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 329 509 2.4E-69 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PRINTS PR01900 YidC translocation/secretion protein signature 464 488 2.2E-26 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PRINTS PR01900 YidC translocation/secretion protein signature 315 331 2.2E-26 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS02925 ec6227768288d53ad3ee9fd0d59f8c16 526 PRINTS PR01900 YidC translocation/secretion protein signature 444 459 2.2E-26 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 UPTC3659_RS07070 1cc2724bfb51754a218f0e1cf1e2a9fa 199 PANTHER PTHR11922 56 199 1.4E-14 T 23-04-2016 UPTC3659_RS07070 1cc2724bfb51754a218f0e1cf1e2a9fa 199 PANTHER PTHR11922:SF18 56 199 1.4E-14 T 23-04-2016 UPTC3659_RS07070 1cc2724bfb51754a218f0e1cf1e2a9fa 199 SUPERFAMILY SSF52317 37 196 1.24E-25 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS07070 1cc2724bfb51754a218f0e1cf1e2a9fa 199 Pfam PF00117 Glutamine amidotransferase class-I 75 194 5.6E-12 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 UPTC3659_RS07070 1cc2724bfb51754a218f0e1cf1e2a9fa 199 Gene3D G3DSA:3.40.50.880 56 198 7.9E-28 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS05610 d4cc0470d5b4a8efddbb144f1dca17a6 217 SUPERFAMILY SSF50800 2 215 1.15E-62 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain UPTC3659_RS05610 d4cc0470d5b4a8efddbb144f1dca17a6 217 Gene3D G3DSA:2.40.33.20 2 209 1.9E-58 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like UPTC3659_RS05610 d4cc0470d5b4a8efddbb144f1dca17a6 217 Pfam PF03473 MOSC domain 46 156 2.3E-13 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 UPTC3659_RS05610 d4cc0470d5b4a8efddbb144f1dca17a6 217 PANTHER PTHR30212:SF2 1 207 2.4E-34 T 23-04-2016 UPTC3659_RS05610 d4cc0470d5b4a8efddbb144f1dca17a6 217 PANTHER PTHR30212 1 207 2.4E-34 T 23-04-2016 UPTC3659_RS00085 3e3eb7615a2915d4f761a687c53bf6ea 545 TIGRFAM TIGR00337 PyrG: CTP synthase 5 538 1.3E-242 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 UPTC3659_RS00085 3e3eb7615a2915d4f761a687c53bf6ea 545 Pfam PF06418 CTP synthase N-terminus 7 269 3.2E-123 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 UPTC3659_RS00085 3e3eb7615a2915d4f761a687c53bf6ea 545 Pfam PF00117 Glutamine amidotransferase class-I 304 536 1.6E-53 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 UPTC3659_RS00085 3e3eb7615a2915d4f761a687c53bf6ea 545 PANTHER PTHR11550 1 540 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 UPTC3659_RS00085 3e3eb7615a2915d4f761a687c53bf6ea 545 SUPERFAMILY SSF52540 6 269 2.01E-117 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00085 3e3eb7615a2915d4f761a687c53bf6ea 545 Gene3D G3DSA:3.40.50.300 4 286 1.4E-131 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00085 3e3eb7615a2915d4f761a687c53bf6ea 545 Hamap MF_01227 CTP synthase [pyrG]. 6 543 50.401 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 UPTC3659_RS00085 3e3eb7615a2915d4f761a687c53bf6ea 545 SUPERFAMILY SSF52317 292 541 4.74E-75 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS00085 3e3eb7615a2915d4f761a687c53bf6ea 545 Gene3D G3DSA:3.40.50.880 291 542 8.0E-94 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS08990 bb8984a44cdc7755c156e694f3cd4006 765 PANTHER PTHR30288 4 490 8.0E-39 T 23-04-2016 UPTC3659_RS08990 bb8984a44cdc7755c156e694f3cd4006 765 PANTHER PTHR30288 677 763 8.0E-39 T 23-04-2016 UPTC3659_RS08990 bb8984a44cdc7755c156e694f3cd4006 765 PANTHER PTHR30288 509 553 8.0E-39 T 23-04-2016 UPTC3659_RS08990 bb8984a44cdc7755c156e694f3cd4006 765 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 382 748 2.0E-28 T 23-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 UPTC3659_RS08990 bb8984a44cdc7755c156e694f3cd4006 765 PANTHER PTHR30288:SF0 4 490 8.0E-39 T 23-04-2016 UPTC3659_RS08990 bb8984a44cdc7755c156e694f3cd4006 765 PANTHER PTHR30288:SF0 677 763 8.0E-39 T 23-04-2016 UPTC3659_RS08990 bb8984a44cdc7755c156e694f3cd4006 765 PANTHER PTHR30288:SF0 509 553 8.0E-39 T 23-04-2016 UPTC3659_RS08990 bb8984a44cdc7755c156e694f3cd4006 765 Pfam PF07196 Flagellin hook IN motif 138 195 1.5E-7 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 UPTC3659_RS08990 bb8984a44cdc7755c156e694f3cd4006 765 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 13 112 2.9E-8 T 23-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 Gene3D G3DSA:3.10.290.10 10 58 4.0E-13 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 SUPERFAMILY SSF55120 72 297 1.18E-57 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 PANTHER PTHR11079 9 310 7.7E-70 T 23-04-2016 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 Pfam PF00849 RNA pseudouridylate synthase 84 241 1.5E-23 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 130 144 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 SMART SM00363 10 72 4.6E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 9 297 4.2E-67 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 SUPERFAMILY SSF55174 5 98 2.75E-11 T 23-04-2016 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 PANTHER PTHR11079:SF73 9 310 7.7E-70 T 23-04-2016 UPTC3659_RS03520 8915d53171a7fa325d438b59b5958e81 320 Pfam PF01479 S4 domain 10 56 1.5E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS00805 91a23ba8f99ea28e37287c303b35c8ec 87 ProDom PD061650 JHP0447 HP0495 CJ0253 12 87 8.0E-37 T 23-04-2016 UPTC3659_RS00805 91a23ba8f99ea28e37287c303b35c8ec 87 SUPERFAMILY SSF117991 5 81 2.35E-20 T 23-04-2016 IPR027471 YbeD-like domain UPTC3659_RS00805 91a23ba8f99ea28e37287c303b35c8ec 87 Gene3D G3DSA:3.30.70.1460 8 82 3.6E-8 T 23-04-2016 IPR027471 YbeD-like domain UPTC3659_RS00805 91a23ba8f99ea28e37287c303b35c8ec 87 Pfam PF04359 Protein of unknown function (DUF493) 11 83 2.9E-8 T 23-04-2016 IPR007454 Uncharacterised protein family UPF0250 UPTC3659_RS02960 ad60961753ca25ae15373a576dad6705 126 SUPERFAMILY SSF54637 1 120 1.94E-30 T 23-04-2016 IPR029069 HotDog domain UPTC3659_RS02960 ad60961753ca25ae15373a576dad6705 126 Pfam PF03061 Thioesterase superfamily 13 94 1.7E-14 T 23-04-2016 IPR006683 Thioesterase domain UPTC3659_RS02960 ad60961753ca25ae15373a576dad6705 126 Gene3D G3DSA:3.10.129.10 1 121 2.6E-35 T 23-04-2016 IPR029069 HotDog domain UPTC3659_RS02960 ad60961753ca25ae15373a576dad6705 126 PANTHER PTHR31793 1 126 1.0E-26 T 23-04-2016 UPTC3659_RS02960 ad60961753ca25ae15373a576dad6705 126 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 4 21 - T 23-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 UPTC3659_RS02960 ad60961753ca25ae15373a576dad6705 126 PANTHER PTHR31793:SF9 1 126 1.0E-26 T 23-04-2016 UPTC3659_RS02960 ad60961753ca25ae15373a576dad6705 126 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 3 110 8.5E-29 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 UPTC3659_RS02960 ad60961753ca25ae15373a576dad6705 126 PIRSF PIRSF003230 1 126 9.9E-39 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 SUPERFAMILY SSF53681 104 204 1.32E-20 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 Gene3D G3DSA:3.40.50.1860 115 210 3.6E-23 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 Gene3D G3DSA:3.40.50.1860 2 114 9.8E-41 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 PANTHER PTHR21198 2 219 1.3E-63 T 23-04-2016 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 226 1.2E-53 T 23-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 SUPERFAMILY SSF53681 2 114 9.16E-35 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 190 200 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 PANTHER PTHR21198:SF7 2 219 1.3E-63 T 23-04-2016 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 218 3.5E-50 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS04210 12be25d5d484f16d302b4b75a5278fbc 227 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS03755 1bfa9c24d8f11dfa5e61f27be5ce4229 383 Pfam PF01464 Transglycosylase SLT domain 83 184 2.5E-25 T 23-04-2016 IPR008258 Transglycosylase SLT domain 1 UPTC3659_RS03755 1bfa9c24d8f11dfa5e61f27be5ce4229 383 SMART SM00257 314 357 2.2E-12 T 23-04-2016 IPR018392 LysM domain UPTC3659_RS03755 1bfa9c24d8f11dfa5e61f27be5ce4229 383 PANTHER PTHR21666:SF219 76 370 3.3E-46 T 23-04-2016 UPTC3659_RS03755 1bfa9c24d8f11dfa5e61f27be5ce4229 383 SUPERFAMILY SSF53955 73 213 1.35E-29 T 23-04-2016 IPR023346 Lysozyme-like domain UPTC3659_RS03755 1bfa9c24d8f11dfa5e61f27be5ce4229 383 Pfam PF01476 LysM domain 315 356 7.9E-11 T 23-04-2016 IPR018392 LysM domain UPTC3659_RS03755 1bfa9c24d8f11dfa5e61f27be5ce4229 383 PANTHER PTHR21666 76 370 3.3E-46 T 23-04-2016 UPTC3659_RS03755 1bfa9c24d8f11dfa5e61f27be5ce4229 383 SUPERFAMILY SSF54106 313 356 4.58E-10 T 23-04-2016 IPR018392 LysM domain UPTC3659_RS03755 1bfa9c24d8f11dfa5e61f27be5ce4229 383 Gene3D G3DSA:1.10.530.10 73 215 4.0E-36 T 23-04-2016 UPTC3659_RS03755 1bfa9c24d8f11dfa5e61f27be5ce4229 383 Gene3D G3DSA:3.10.350.10 313 357 4.9E-15 T 23-04-2016 IPR018392 LysM domain UPTC3659_RS08885 5d14840119fe205ba614ffb260ea7fa7 151 PANTHER PTHR33695:SF1 1 149 1.0E-25 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 UPTC3659_RS08885 5d14840119fe205ba614ffb260ea7fa7 151 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 5 149 13.048 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 UPTC3659_RS08885 5d14840119fe205ba614ffb260ea7fa7 151 PANTHER PTHR33695 1 149 1.0E-25 T 23-04-2016 UPTC3659_RS08885 5d14840119fe205ba614ffb260ea7fa7 151 TIGRFAM TIGR00077 lspA: signal peptidase II 8 147 2.9E-32 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 UPTC3659_RS08885 5d14840119fe205ba614ffb260ea7fa7 151 Pfam PF01252 Signal peptidase (SPase) II 13 143 1.3E-22 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 UPTC3659_RS08885 5d14840119fe205ba614ffb260ea7fa7 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 2.5E-11 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 UPTC3659_RS08885 5d14840119fe205ba614ffb260ea7fa7 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 124 140 2.5E-11 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 UPTC3659_RS08885 5d14840119fe205ba614ffb260ea7fa7 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 2.5E-11 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 UPTC3659_RS00410 21d3c8fabc7942e4bb9e2341ba8779e7 124 SUPERFAMILY SSF54843 3 105 5.1E-31 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00410 21d3c8fabc7942e4bb9e2341ba8779e7 124 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 105 22.889 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS00410 21d3c8fabc7942e4bb9e2341ba8779e7 124 PANTHER PTHR13501 3 124 4.6E-27 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS00410 21d3c8fabc7942e4bb9e2341ba8779e7 124 Gene3D G3DSA:3.90.470.10 2 106 1.4E-30 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00410 21d3c8fabc7942e4bb9e2341ba8779e7 124 Pfam PF00237 Ribosomal protein L22p/L17e 7 102 9.0E-23 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00410 21d3c8fabc7942e4bb9e2341ba8779e7 124 ProSitePatterns PS00464 Ribosomal protein L22 signature. 78 102 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00410 21d3c8fabc7942e4bb9e2341ba8779e7 124 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 4 102 2.2E-33 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS00540 1c1cb6e685b841053e7a9ad1373a304f 429 Gene3D G3DSA:1.20.1250.20 11 219 8.3E-23 T 23-04-2016 UPTC3659_RS00540 1c1cb6e685b841053e7a9ad1373a304f 429 Gene3D G3DSA:1.20.1250.20 242 425 8.0E-7 T 23-04-2016 UPTC3659_RS00540 1c1cb6e685b841053e7a9ad1373a304f 429 PANTHER PTHR23508 5 422 1.3E-137 T 23-04-2016 UPTC3659_RS00540 1c1cb6e685b841053e7a9ad1373a304f 429 SUPERFAMILY SSF103473 9 427 2.35E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS00540 1c1cb6e685b841053e7a9ad1373a304f 429 PANTHER PTHR23508:SF5 5 422 1.3E-137 T 23-04-2016 UPTC3659_RS00540 1c1cb6e685b841053e7a9ad1373a304f 429 Pfam PF07690 Major Facilitator Superfamily 28 384 3.0E-25 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 PIRSF PIRSF000441 1 201 5.0E-74 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 Gene3D G3DSA:2.160.10.10 67 197 1.4E-32 T 23-04-2016 UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 168 1.5E-72 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 154 1.3E-9 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 77 110 0.0014 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 PANTHER PTHR23416 1 170 1.0E-76 T 23-04-2016 UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 PANTHER PTHR23416:SF55 1 170 1.0E-76 T 23-04-2016 UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 Gene3D G3DSA:1.10.3130.10 2 66 4.1E-20 T 23-04-2016 UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 SUPERFAMILY SSF51161 3 169 1.52E-50 T 23-04-2016 IPR011004 Trimeric LpxA-like UPTC3659_RS04325 e3c93459675ece9839e7422f13b10a41 201 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 129 157 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 UPTC3659_RS05625 e3e783993b52c65a74c6c12ff5462b1b 294 SUPERFAMILY SSF53686 13 285 3.14E-34 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS05625 e3e783993b52c65a74c6c12ff5462b1b 294 Gene3D G3DSA:3.40.50.1100 126 282 2.5E-11 T 23-04-2016 UPTC3659_RS05625 e3e783993b52c65a74c6c12ff5462b1b 294 Gene3D G3DSA:3.40.50.1100 30 116 7.8E-5 T 23-04-2016 UPTC3659_RS05625 e3e783993b52c65a74c6c12ff5462b1b 294 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 15 177 1.6E-6 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme UPTC3659_RS00690 016fbca5ec1d124fdbb77ced1e37b469 292 Pfam PF12833 Helix-turn-helix domain 207 282 6.6E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UPTC3659_RS00690 016fbca5ec1d124fdbb77ced1e37b469 292 Gene3D G3DSA:1.10.10.60 203 237 3.1E-5 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 UPTC3659_RS00690 016fbca5ec1d124fdbb77ced1e37b469 292 SMART SM00342 200 283 3.1E-18 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UPTC3659_RS00690 016fbca5ec1d124fdbb77ced1e37b469 292 Gene3D G3DSA:1.10.10.60 238 285 2.6E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 UPTC3659_RS00690 016fbca5ec1d124fdbb77ced1e37b469 292 PANTHER PTHR11019 202 291 2.0E-18 T 23-04-2016 UPTC3659_RS00690 016fbca5ec1d124fdbb77ced1e37b469 292 SUPERFAMILY SSF46689 237 285 1.12E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 UPTC3659_RS01345 5d35872a5e0758ee82547ab8d40b7d31 276 PANTHER PTHR22572 4 274 6.3E-88 T 23-04-2016 UPTC3659_RS01345 5d35872a5e0758ee82547ab8d40b7d31 276 Pfam PF00483 Nucleotidyl transferase 9 266 3.9E-26 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 UPTC3659_RS01345 5d35872a5e0758ee82547ab8d40b7d31 276 PANTHER PTHR22572:SF14 4 274 6.3E-88 T 23-04-2016 UPTC3659_RS01345 5d35872a5e0758ee82547ab8d40b7d31 276 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 264 1.2E-117 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 UPTC3659_RS01345 5d35872a5e0758ee82547ab8d40b7d31 276 SUPERFAMILY SSF53448 4 269 1.06E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS01345 5d35872a5e0758ee82547ab8d40b7d31 276 Gene3D G3DSA:3.90.550.10 5 272 6.6E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 402 3.4E-60 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 SUPERFAMILY SSF47323 623 808 5.79E-20 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 808 20.992 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 2.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 571 2.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 2.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 2.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 487 505 2.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 2.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 2.4E-43 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 618 6.0E-26 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PANTHER PTHR11946 290 808 0.0 T 23-04-2016 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PANTHER PTHR11946 243 268 0.0 T 23-04-2016 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PANTHER PTHR11946 1 204 0.0 T 23-04-2016 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 Pfam PF09334 tRNA synthetases class I (M) 34 180 1.1E-25 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 SUPERFAMILY SSF50677 225 415 8.06E-44 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 SUPERFAMILY SSF52374 416 627 8.79E-141 T 23-04-2016 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 SUPERFAMILY SSF52374 3 225 8.79E-141 T 23-04-2016 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 809 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 Pfam PF08264 Anticodon-binding domain of tRNA 658 774 1.1E-5 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 Gene3D G3DSA:3.90.740.10 222 424 5.3E-52 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 Gene3D G3DSA:1.10.730.10 608 732 6.1E-26 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 Gene3D G3DSA:3.40.50.620 2 221 1.8E-145 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 Gene3D G3DSA:3.40.50.620 425 607 1.8E-145 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PANTHER PTHR11946:SF7 290 808 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PANTHER PTHR11946:SF7 243 268 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS06315 81e119e8abd654ae260ac983f34f5616 809 PANTHER PTHR11946:SF7 1 204 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 UPTC3659_RS08630 73fa6227b039317b4a97f59fac50ba74 210 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 208 6.6E-53 T 23-04-2016 UPTC3659_RS08630 73fa6227b039317b4a97f59fac50ba74 210 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 7 209 1.2E-61 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 UPTC3659_RS08630 73fa6227b039317b4a97f59fac50ba74 210 SUPERFAMILY SSF53335 12 208 1.29E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08630 73fa6227b039317b4a97f59fac50ba74 210 PANTHER PTHR11579 12 203 4.7E-42 T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 UPTC3659_RS08630 73fa6227b039317b4a97f59fac50ba74 210 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 131 146 - T 23-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 UPTC3659_RS08630 73fa6227b039317b4a97f59fac50ba74 210 Gene3D G3DSA:3.40.50.150 16 208 1.4E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS05745 aff76f857da8695738773f951002c8c4 319 SUPERFAMILY SSF53067 124 186 7.12E-16 T 23-04-2016 UPTC3659_RS05745 aff76f857da8695738773f951002c8c4 319 SUPERFAMILY SSF53067 217 316 7.12E-16 T 23-04-2016 UPTC3659_RS05745 aff76f857da8695738773f951002c8c4 319 Gene3D G3DSA:3.30.420.150 124 317 1.0E-22 T 23-04-2016 UPTC3659_RS05745 aff76f857da8695738773f951002c8c4 319 Gene3D G3DSA:3.30.420.40 4 113 5.2E-20 T 23-04-2016 UPTC3659_RS05745 aff76f857da8695738773f951002c8c4 319 SUPERFAMILY SSF53067 4 112 3.24E-19 T 23-04-2016 UPTC3659_RS05745 aff76f857da8695738773f951002c8c4 319 Pfam PF02541 Ppx/GppA phosphatase family 37 311 2.4E-19 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 UPTC3659_RS05745 aff76f857da8695738773f951002c8c4 319 PANTHER PTHR30005 4 158 1.8E-25 T 23-04-2016 UPTC3659_RS05745 aff76f857da8695738773f951002c8c4 319 PANTHER PTHR30005 178 309 1.8E-25 T 23-04-2016 UPTC3659_RS00390 8b49aaf83168240d85e072f86f425b21 204 Gene3D G3DSA:3.40.1370.10 56 201 3.5E-44 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00390 8b49aaf83168240d85e072f86f425b21 204 Pfam PF00573 Ribosomal protein L4/L1 family 24 201 4.2E-55 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00390 8b49aaf83168240d85e072f86f425b21 204 SUPERFAMILY SSF52166 1 201 1.06E-60 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00390 8b49aaf83168240d85e072f86f425b21 204 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 204 26.163 T 23-04-2016 IPR013005 50S ribosomal protein uL4 UPTC3659_RS00390 8b49aaf83168240d85e072f86f425b21 204 PANTHER PTHR10746 1 201 1.3E-52 T 23-04-2016 IPR013005 50S ribosomal protein uL4 UPTC3659_RS00390 8b49aaf83168240d85e072f86f425b21 204 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 23 201 4.4E-61 T 23-04-2016 IPR013005 50S ribosomal protein uL4 UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 Gene3D G3DSA:3.40.50.720 191 295 2.7E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 Gene3D G3DSA:3.90.180.10 13 190 4.3E-64 T 23-04-2016 IPR011032 GroES-like UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 156 1.9E-26 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 PANTHER PTHR11695 26 359 5.1E-130 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 SMART SM00829 19 354 3.5E-4 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 23-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 PANTHER PTHR11695:SF261 26 359 5.1E-130 T 23-04-2016 UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 SUPERFAMILY SSF50129 19 181 1.45E-48 T 23-04-2016 IPR011032 GroES-like UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 SUPERFAMILY SSF51735 162 324 1.05E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01800 8ad252d5568c2a09835a0bcaa83838da 360 Pfam PF00107 Zinc-binding dehydrogenase 198 319 9.0E-15 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 SUPERFAMILY SSF53955 39 245 6.47E-71 T 23-04-2016 IPR023346 Lysozyme-like domain UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 SUPERFAMILY SSF56601 209 231 5.45E-106 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 SUPERFAMILY SSF56601 259 620 5.45E-106 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 PANTHER PTHR32282 1 610 8.7E-180 T 23-04-2016 UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 Pfam PF00912 Transglycosylase 52 227 1.0E-57 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 Gene3D G3DSA:1.10.3810.10 52 230 1.4E-66 T 23-04-2016 UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 Gene3D G3DSA:3.40.710.10 231 621 1.0E-106 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 PANTHER PTHR32282:SF5 1 610 8.7E-180 T 23-04-2016 UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 62 594 7.9E-179 T 23-04-2016 UPTC3659_RS06465 f92d6c26aa5f80038ed7288564c562a4 643 Pfam PF00905 Penicillin binding protein transpeptidase domain 319 590 1.1E-28 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UPTC3659_RS05570 671c204b83c45c03e8976149cb39bbcf 312 PANTHER PTHR30160:SF13 14 310 9.4E-16 T 23-04-2016 UPTC3659_RS05570 671c204b83c45c03e8976149cb39bbcf 312 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 300 20.557 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 UPTC3659_RS05570 671c204b83c45c03e8976149cb39bbcf 312 PANTHER PTHR30160 14 310 9.4E-16 T 23-04-2016 UPTC3659_RS05570 671c204b83c45c03e8976149cb39bbcf 312 Gene3D G3DSA:3.40.50.300 120 185 7.7E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05570 671c204b83c45c03e8976149cb39bbcf 312 Gene3D G3DSA:3.40.50.300 59 87 7.7E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05570 671c204b83c45c03e8976149cb39bbcf 312 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 19 194 3.6E-30 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 UPTC3659_RS05570 671c204b83c45c03e8976149cb39bbcf 312 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 206 295 2.0E-7 T 23-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 UPTC3659_RS08910 d67ac6a14a5659f4dc0c0ec8de4b6bbd 206 PANTHER PTHR36933 27 206 8.8E-19 T 23-04-2016 UPTC3659_RS08910 d67ac6a14a5659f4dc0c0ec8de4b6bbd 206 Pfam PF03713 Domain of unknown function (DUF305) 19 108 2.2E-17 T 23-04-2016 IPR005183 Domain of unknown function DUF305 UPTC3659_RS08910 d67ac6a14a5659f4dc0c0ec8de4b6bbd 206 Pfam PF03713 Domain of unknown function (DUF305) 130 203 4.9E-14 T 23-04-2016 IPR005183 Domain of unknown function DUF305 UPTC3659_RS08910 d67ac6a14a5659f4dc0c0ec8de4b6bbd 206 PANTHER PTHR36933:SF1 27 206 8.8E-19 T 23-04-2016 UPTC3659_RS08910 d67ac6a14a5659f4dc0c0ec8de4b6bbd 206 Gene3D G3DSA:1.20.1260.10 27 110 9.7E-22 T 23-04-2016 IPR012347 Ferritin-related UPTC3659_RS08910 d67ac6a14a5659f4dc0c0ec8de4b6bbd 206 Gene3D G3DSA:1.20.1260.10 128 204 5.0E-18 T 23-04-2016 IPR012347 Ferritin-related UPTC3659_RS05580 e868d25fc1fc05ac69e83798d05fc64e 240 SUPERFAMILY SSF53448 2 236 5.87E-48 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS05580 e868d25fc1fc05ac69e83798d05fc64e 240 PANTHER PTHR21485 1 237 2.1E-76 T 23-04-2016 UPTC3659_RS05580 e868d25fc1fc05ac69e83798d05fc64e 240 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 231 8.2E-71 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 UPTC3659_RS05580 e868d25fc1fc05ac69e83798d05fc64e 240 Pfam PF02348 Cytidylyltransferase 1 212 2.7E-43 T 23-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 UPTC3659_RS05580 e868d25fc1fc05ac69e83798d05fc64e 240 PANTHER PTHR21485:SF4 1 237 2.1E-76 T 23-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 UPTC3659_RS05580 e868d25fc1fc05ac69e83798d05fc64e 240 Gene3D G3DSA:3.90.550.10 2 235 2.0E-55 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 Gene3D G3DSA:3.40.50.300 4 266 2.5E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 Pfam PF13361 UvrD-like helicase C-terminal domain 270 649 8.8E-47 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 SUPERFAMILY SSF52540 482 664 7.45E-115 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 SUPERFAMILY SSF52540 4 415 7.45E-115 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 PANTHER PTHR11070 562 664 1.8E-117 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 PANTHER PTHR11070 3 496 1.8E-117 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 107 1.0E-23 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 Pfam PF00580 UvrD/REP helicase N-terminal domain 164 263 8.6E-24 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 Gene3D G3DSA:3.40.50.300 585 666 2.1E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04495 543c95bf015e6698ea4bc151eb1a407a 675 Gene3D G3DSA:3.40.50.300 273 382 2.1E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 PANTHER PTHR11451:SF41 3 312 1.3E-63 T 23-04-2016 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 6 17 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 Gene3D G3DSA:1.10.10.350 335 421 4.8E-7 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 Gene3D G3DSA:3.40.50.620 2 65 2.9E-39 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 Gene3D G3DSA:3.40.50.620 178 228 2.9E-39 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 300 4.3E-79 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 1 429 24.268 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 SUPERFAMILY SSF48163 276 421 7.46E-24 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 SUPERFAMILY SSF52374 2 295 3.75E-84 T 23-04-2016 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 422 1.8E-132 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 PANTHER PTHR11451 3 312 1.3E-63 T 23-04-2016 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 Gene3D G3DSA:1.10.1160.10 230 311 1.7E-26 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 Gene3D G3DSA:3.90.800.10 66 177 2.8E-26 T 23-04-2016 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 176 186 7.12E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 32 45 7.12E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 192 200 7.12E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 3 15 7.12E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS04125 854215964b7968f139294b6181a988ac 431 PRINTS PR00987 Glutamyl-tRNA synthetase signature 17 28 7.12E-23 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS07635 9b4472a9275ef5622e2544084b791d22 376 PANTHER PTHR30244 4 370 4.9E-101 T 23-04-2016 UPTC3659_RS07635 9b4472a9275ef5622e2544084b791d22 376 PANTHER PTHR30244:SF3 4 370 4.9E-101 T 23-04-2016 UPTC3659_RS07635 9b4472a9275ef5622e2544084b791d22 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 9 362 2.1E-96 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase UPTC3659_RS07635 9b4472a9275ef5622e2544084b791d22 376 SUPERFAMILY SSF53383 2 368 6.33E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS07635 9b4472a9275ef5622e2544084b791d22 376 Gene3D G3DSA:3.90.1150.10 244 371 1.2E-21 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS07635 9b4472a9275ef5622e2544084b791d22 376 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 367 5.6E-150 T 23-04-2016 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase UPTC3659_RS07635 9b4472a9275ef5622e2544084b791d22 376 PIRSF PIRSF000390 1 371 1.9E-100 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase UPTC3659_RS07635 9b4472a9275ef5622e2544084b791d22 376 Gene3D G3DSA:3.40.640.10 1 242 7.1E-73 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 Gene3D G3DSA:3.40.50.920 265 372 5.7E-22 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 PANTHER PTHR32154:SF14 1 184 1.4E-112 T 23-04-2016 UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 PANTHER PTHR32154:SF14 212 374 1.4E-112 T 23-04-2016 UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 273 366 5.0E-20 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 240 7.1E-65 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 PANTHER PTHR32154 1 184 1.4E-112 T 23-04-2016 UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 PANTHER PTHR32154 212 374 1.4E-112 T 23-04-2016 UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 SUPERFAMILY SSF52518 3 256 2.86E-65 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 Gene3D G3DSA:3.40.50.970 2 191 1.4E-74 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS04665 05848f17daf318e05eebb1abf276922c 374 SUPERFAMILY SSF52922 265 372 6.02E-23 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 SUPERFAMILY SSF55681 1 282 8.28E-123 T 23-04-2016 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 Gene3D G3DSA:3.30.930.10 1 207 1.1E-99 T 23-04-2016 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 Gene3D G3DSA:1.20.58.180 209 282 6.9E-29 T 23-04-2016 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 245 261 2.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.7E-67 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 285 57.323 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 281 5.3E-142 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 283 1.2E-150 T 23-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS06105 8131c12eeea50e7e9b25bdbfd113907a 286 PANTHER PTHR30075 1 279 2.3E-199 T 23-04-2016 UPTC3659_RS08725 b8ed3a2e2e7172e46a7bc514a73ef8e5 190 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 7.5E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site UPTC3659_RS08725 b8ed3a2e2e7172e46a7bc514a73ef8e5 190 SUPERFAMILY SSF54523 5 80 9.42E-14 T 23-04-2016 UPTC3659_RS08725 b8ed3a2e2e7172e46a7bc514a73ef8e5 190 PRINTS PR00813 Bacterial general secretion pathway protein G signature 4 29 6.4E-8 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 UPTC3659_RS08725 b8ed3a2e2e7172e46a7bc514a73ef8e5 190 PRINTS PR00813 Bacterial general secretion pathway protein G signature 40 58 6.4E-8 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 UPTC3659_RS08725 b8ed3a2e2e7172e46a7bc514a73ef8e5 190 Gene3D G3DSA:3.30.700.10 5 73 6.6E-10 T 23-04-2016 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 SUPERFAMILY SSF56672 110 282 3.2E-40 T 23-04-2016 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 SUPERFAMILY SSF56672 3 76 3.2E-40 T 23-04-2016 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 Gene3D G3DSA:3.30.1490.100 308 425 1.1E-5 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 PANTHER PTHR11076 110 441 3.5E-38 T 23-04-2016 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 PANTHER PTHR11076 7 74 3.5E-38 T 23-04-2016 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 Pfam PF00817 impB/mucB/samB family 7 191 5.7E-21 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 PANTHER PTHR11076:SF31 110 441 3.5E-38 T 23-04-2016 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 PANTHER PTHR11076:SF31 7 74 3.5E-38 T 23-04-2016 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 Gene3D G3DSA:1.10.150.20 218 280 1.0E-12 T 23-04-2016 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 Pfam PF11799 impB/mucB/samB family C-terminal domain 292 424 1.7E-12 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS07465 772763709c18d30d768507286776167e 489 Gene3D G3DSA:3.30.70.270 103 193 1.0E-18 T 23-04-2016 UPTC3659_RS00770 c63ebec834190081515fb5ddfbcee57b 213 Gene3D G3DSA:3.40.50.720 3 134 4.1E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS00770 c63ebec834190081515fb5ddfbcee57b 213 SUPERFAMILY SSF116726 136 211 6.28E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS00770 c63ebec834190081515fb5ddfbcee57b 213 PANTHER PTHR16254 8 161 2.1E-35 T 23-04-2016 UPTC3659_RS00770 c63ebec834190081515fb5ddfbcee57b 213 SUPERFAMILY SSF51735 6 134 1.02E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS00770 c63ebec834190081515fb5ddfbcee57b 213 Pfam PF02254 TrkA-N domain 8 121 4.5E-26 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 UPTC3659_RS00770 c63ebec834190081515fb5ddfbcee57b 213 Gene3D G3DSA:3.30.70.1450 151 210 3.4E-5 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS00050 d676aa3432ae6084b32f92afa0576caa 250 Hamap MF_01384 Urease accessory protein UreD [ureD]. 3 247 19.754 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 UPTC3659_RS00050 d676aa3432ae6084b32f92afa0576caa 250 PANTHER PTHR33643 7 221 2.9E-31 T 23-04-2016 UPTC3659_RS00050 d676aa3432ae6084b32f92afa0576caa 250 PANTHER PTHR33643:SF1 7 221 2.9E-31 T 23-04-2016 UPTC3659_RS00050 d676aa3432ae6084b32f92afa0576caa 250 Pfam PF01774 UreD urease accessory protein 44 234 1.8E-34 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 UPTC3659_RS06705 f52c617dba995321cf608f6c5cf1bc65 442 PANTHER PTHR11206:SF132 18 436 5.8E-84 T 23-04-2016 UPTC3659_RS06705 f52c617dba995321cf608f6c5cf1bc65 442 PIRSF PIRSF006603 2 440 2.8E-62 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 UPTC3659_RS06705 f52c617dba995321cf608f6c5cf1bc65 442 Pfam PF01554 MatE 21 181 1.3E-28 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 UPTC3659_RS06705 f52c617dba995321cf608f6c5cf1bc65 442 Pfam PF01554 MatE 243 399 4.2E-16 T 23-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 UPTC3659_RS06705 f52c617dba995321cf608f6c5cf1bc65 442 PANTHER PTHR11206 18 436 5.8E-84 T 23-04-2016 UPTC3659_RS06925 f9e0105ffe1f45691b9de0a7d83f109e 363 PANTHER PTHR13939:SF0 209 355 1.5E-33 T 23-04-2016 UPTC3659_RS06925 f9e0105ffe1f45691b9de0a7d83f109e 363 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 209 351 9.2E-31 T 23-04-2016 IPR008136 CinA, C-terminal UPTC3659_RS06925 f9e0105ffe1f45691b9de0a7d83f109e 363 Gene3D G3DSA:3.90.950.20 206 355 1.8E-41 T 23-04-2016 IPR008136 CinA, C-terminal UPTC3659_RS06925 f9e0105ffe1f45691b9de0a7d83f109e 363 SUPERFAMILY SSF142433 205 355 8.63E-40 T 23-04-2016 IPR008136 CinA, C-terminal UPTC3659_RS06925 f9e0105ffe1f45691b9de0a7d83f109e 363 PANTHER PTHR13939 209 355 1.5E-33 T 23-04-2016 UPTC3659_RS06925 f9e0105ffe1f45691b9de0a7d83f109e 363 Pfam PF02464 Competence-damaged protein 208 354 2.7E-41 T 23-04-2016 IPR008136 CinA, C-terminal UPTC3659_RS09010 b5283cdbbd139eac4d9d15df7b791199 429 SUPERFAMILY SSF69279 8 214 9.35E-25 T 23-04-2016 UPTC3659_RS09010 b5283cdbbd139eac4d9d15df7b791199 429 Pfam PF05954 Phage late control gene D protein (GPD) 52 349 2.4E-18 T 23-04-2016 UPTC3659_RS09010 b5283cdbbd139eac4d9d15df7b791199 429 Gene3D G3DSA:3.55.50.10 129 209 6.4E-16 T 23-04-2016 UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 PANTHER PTHR21087:SF0 1 160 3.5E-33 T 23-04-2016 UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 PRINTS PR01100 Shikimate kinase family signature 77 86 2.8E-20 T 23-04-2016 UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 PRINTS PR01100 Shikimate kinase family signature 59 67 2.8E-20 T 23-04-2016 UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 PRINTS PR01100 Shikimate kinase family signature 94 111 2.8E-20 T 23-04-2016 UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 PRINTS PR01100 Shikimate kinase family signature 31 44 2.8E-20 T 23-04-2016 UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 PRINTS PR01100 Shikimate kinase family signature 7 22 2.8E-20 T 23-04-2016 UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 Gene3D G3DSA:3.40.50.300 2 165 2.0E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 PANTHER PTHR21087 1 160 3.5E-33 T 23-04-2016 UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 Pfam PF01202 Shikimate kinase 13 164 5.1E-32 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 SUPERFAMILY SSF52540 6 163 7.44E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02850 6252b5cbdc008d7ba2be10cc2bc52a0e 165 Hamap MF_00109 Shikimate kinase [aroK]. 4 165 21.652 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 UPTC3659_RS05095 c27a64494d049d26f238080c8583db4a 822 Pfam PF05954 Phage late control gene D protein (GPD) 52 348 1.1E-17 T 23-04-2016 UPTC3659_RS05095 c27a64494d049d26f238080c8583db4a 822 SUPERFAMILY SSF69279 8 214 1.76E-24 T 23-04-2016 UPTC3659_RS05095 c27a64494d049d26f238080c8583db4a 822 SUPERFAMILY SSF69349 571 768 5.81E-23 T 23-04-2016 UPTC3659_RS05095 c27a64494d049d26f238080c8583db4a 822 SUPERFAMILY SSF69349 489 515 5.81E-23 T 23-04-2016 UPTC3659_RS05095 c27a64494d049d26f238080c8583db4a 822 Gene3D G3DSA:3.55.50.10 129 209 1.7E-15 T 23-04-2016 UPTC3659_RS05095 c27a64494d049d26f238080c8583db4a 822 SUPERFAMILY SSF69255 401 499 1.57E-18 T 23-04-2016 UPTC3659_RS05095 c27a64494d049d26f238080c8583db4a 822 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 112 507 3.3E-39 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein UPTC3659_RS05095 c27a64494d049d26f238080c8583db4a 822 Gene3D G3DSA:2.40.50.230 419 499 2.5E-19 T 23-04-2016 IPR006531 Gp5 N-terminal UPTC3659_RS04605 33eff41bb522e6ba9f08a83ba507389d 164 Gene3D G3DSA:1.20.1260.10 1 160 9.0E-61 T 23-04-2016 IPR012347 Ferritin-related UPTC3659_RS04605 33eff41bb522e6ba9f08a83ba507389d 164 Pfam PF00210 Ferritin-like domain 8 144 2.6E-38 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 UPTC3659_RS04605 33eff41bb522e6ba9f08a83ba507389d 164 PANTHER PTHR11431 3 156 1.0E-41 T 23-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 UPTC3659_RS04605 33eff41bb522e6ba9f08a83ba507389d 164 SUPERFAMILY SSF47240 1 159 2.02E-55 T 23-04-2016 IPR009078 Ferritin-like superfamily UPTC3659_RS01210 77cdaebf507af36251226ecdc0fa4aeb 469 Pfam PF10117 McrBC 5-methylcytosine restriction system component 52 426 5.5E-104 T 23-04-2016 IPR019292 5-methylcytosine restriction system component UPTC3659_RS01210 77cdaebf507af36251226ecdc0fa4aeb 469 PANTHER PTHR38733:SF1 151 426 3.1E-41 T 23-04-2016 UPTC3659_RS01210 77cdaebf507af36251226ecdc0fa4aeb 469 PANTHER PTHR38733 151 426 3.1E-41 T 23-04-2016 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 1.1E-58 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 SUPERFAMILY SSF53098 2 153 8.02E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 Gene3D G3DSA:3.30.420.10 2 155 4.6E-51 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 147 - T 23-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 1.0E-19 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 1.0E-19 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.0E-19 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.0E-19 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 150 9.6E-56 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 PANTHER PTHR30194 3 151 8.0E-45 T 23-04-2016 UPTC3659_RS08920 a6b07ae0fd10706d8c713c80a5375415 158 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 41.76 T 23-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 UPTC3659_RS01115 4314940f503e5248a668253f6c731a09 170 Gene3D G3DSA:3.40.50.850 3 169 2.5E-26 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 UPTC3659_RS01115 4314940f503e5248a668253f6c731a09 170 Pfam PF00857 Isochorismatase family 4 169 4.4E-17 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 UPTC3659_RS01115 4314940f503e5248a668253f6c731a09 170 PANTHER PTHR11080 5 170 1.7E-15 T 23-04-2016 UPTC3659_RS01115 4314940f503e5248a668253f6c731a09 170 SUPERFAMILY SSF52499 3 169 3.66E-28 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 UPTC3659_RS01115 4314940f503e5248a668253f6c731a09 170 PANTHER PTHR11080:SF2 5 170 1.7E-15 T 23-04-2016 UPTC3659_RS01275 27d003c2b9da54c999f5326cdccf94fa 211 Gene3D G3DSA:3.40.50.450 14 200 2.8E-54 T 23-04-2016 UPTC3659_RS01275 27d003c2b9da54c999f5326cdccf94fa 211 PANTHER PTHR31223 1 198 6.7E-59 T 23-04-2016 UPTC3659_RS01275 27d003c2b9da54c999f5326cdccf94fa 211 Pfam PF03641 Possible lysine decarboxylase 63 195 5.8E-30 T 23-04-2016 IPR031100 LOG family UPTC3659_RS01275 27d003c2b9da54c999f5326cdccf94fa 211 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 21 197 1.0E-34 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG UPTC3659_RS01275 27d003c2b9da54c999f5326cdccf94fa 211 SUPERFAMILY SSF102405 19 197 2.44E-45 T 23-04-2016 UPTC3659_RS01275 27d003c2b9da54c999f5326cdccf94fa 211 PANTHER PTHR31223:SF1 1 198 6.7E-59 T 23-04-2016 UPTC3659_RS05630 6963cece63cb111aed6b3f4ec5a49041 316 SUPERFAMILY SSF103088 176 298 3.01E-20 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS05630 6963cece63cb111aed6b3f4ec5a49041 316 SUPERFAMILY SSF57997 43 152 3.27E-5 T 23-04-2016 UPTC3659_RS05630 6963cece63cb111aed6b3f4ec5a49041 316 Gene3D G3DSA:3.30.1330.60 172 298 4.2E-25 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS05630 6963cece63cb111aed6b3f4ec5a49041 316 Pfam PF00691 OmpA family 186 291 2.9E-13 T 23-04-2016 IPR006665 OmpA-like domain UPTC3659_RS05630 6963cece63cb111aed6b3f4ec5a49041 316 PANTHER PTHR30128 178 255 3.2E-13 T 23-04-2016 UPTC3659_RS05265 378d62854be7e03ebf5dd187645baf8e 235 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 133 218 7.5E-16 T 23-04-2016 IPR032871 AHH domain-containing protein UPTC3659_RS05200 378d62854be7e03ebf5dd187645baf8e 235 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 133 218 7.5E-16 T 23-04-2016 IPR032871 AHH domain-containing protein UPTC3659_RS00665 2c8643f6fccd3ef732600f79ce2e2934 240 SMART SM00382 27 217 4.9E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS00665 2c8643f6fccd3ef732600f79ce2e2934 240 Pfam PF00005 ABC transporter 19 168 5.8E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS00665 2c8643f6fccd3ef732600f79ce2e2934 240 Gene3D G3DSA:3.40.50.300 2 233 5.4E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00665 2c8643f6fccd3ef732600f79ce2e2934 240 PANTHER PTHR24220:SF483 4 238 2.6E-90 T 23-04-2016 UPTC3659_RS00665 2c8643f6fccd3ef732600f79ce2e2934 240 SUPERFAMILY SSF52540 2 231 1.06E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00665 2c8643f6fccd3ef732600f79ce2e2934 240 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS00665 2c8643f6fccd3ef732600f79ce2e2934 240 PANTHER PTHR24220 4 238 2.6E-90 T 23-04-2016 UPTC3659_RS05825 3964b342282fd96920ca976072113efb 255 Gene3D G3DSA:3.40.50.450 32 174 1.2E-6 T 23-04-2016 UPTC3659_RS05825 3964b342282fd96920ca976072113efb 255 PANTHER PTHR32039 15 184 1.5E-30 T 23-04-2016 UPTC3659_RS05825 3964b342282fd96920ca976072113efb 255 Pfam PF02481 DNA recombination-mediator protein A 10 192 7.1E-50 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 UPTC3659_RS05825 3964b342282fd96920ca976072113efb 255 PANTHER PTHR32039:SF8 15 184 1.5E-30 T 23-04-2016 UPTC3659_RS05825 3964b342282fd96920ca976072113efb 255 SUPERFAMILY SSF102405 15 180 4.4E-20 T 23-04-2016 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 Gene3D G3DSA:3.90.20.20 17 113 4.7E-26 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 SUPERFAMILY SSF51064 120 169 8.11E-18 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 SUPERFAMILY SSF58014 19 113 2.09E-23 T 23-04-2016 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 PRINTS PR00773 GrpE protein signature 68 83 2.9E-27 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 PRINTS PR00773 GrpE protein signature 148 167 2.9E-27 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 PRINTS PR00773 GrpE protein signature 40 56 2.9E-27 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 PRINTS PR00773 GrpE protein signature 121 136 2.9E-27 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 ProSitePatterns PS01071 grpE protein signature. 124 167 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 Gene3D G3DSA:2.30.22.10 115 169 9.0E-25 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 Hamap MF_01151 Protein GrpE [grpE]. 3 169 19.595 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 Pfam PF01025 GrpE 7 169 1.7E-49 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 UPTC3659_RS05775 cd21602b108b34a5ffb7af9664af579b 169 PANTHER PTHR21237 1 169 9.1E-51 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 Gene3D G3DSA:3.90.105.10 134 154 3.3E-9 T 23-04-2016 UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 Gene3D G3DSA:3.90.105.10 23 44 3.3E-9 T 23-04-2016 UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 PANTHER PTHR10192 23 325 3.3E-74 T 23-04-2016 UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 Gene3D G3DSA:2.170.190.11 45 133 1.1E-19 T 23-04-2016 UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 SUPERFAMILY SSF63882 8 168 7.33E-42 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 Gene3D G3DSA:3.40.980.10 155 312 5.2E-37 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 Pfam PF03453 MoeA N-terminal region (domain I and II) 15 159 2.2E-28 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 SMART SM00852 172 307 2.8E-17 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 SUPERFAMILY SSF53218 169 310 4.19E-24 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS04245 7ef7d1edf5af12258bdd99583b6eb2fc 386 Pfam PF00994 Probable molybdopterin binding domain 172 303 4.9E-11 T 23-04-2016 IPR001453 MoaB/Mog domain UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 SUPERFAMILY SSF68923 2 208 4.71E-84 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 SUPERFAMILY SSF53795 210 522 1.47E-133 T 23-04-2016 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 8 522 56.152 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 PIRSF PIRSF006294 1 524 9.0E-242 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 Pfam PF01293 Phosphoenolpyruvate carboxykinase 14 475 2.3E-221 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 Gene3D G3DSA:3.90.228.20 331 521 2.8E-124 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 Gene3D G3DSA:3.90.228.20 210 271 2.8E-124 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 4 523 5.4E-239 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 246 261 - T 23-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 Gene3D G3DSA:3.40.449.10 14 207 5.3E-82 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 UPTC3659_RS07160 7f510055af4f14690835007be40c5ffd 524 PANTHER PTHR30031 6 524 0.0 T 23-04-2016 UPTC3659_RS02935 a308ff1e4c5e076ba5fd231eae5b91ca 108 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 107 13.591 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 UPTC3659_RS02935 a308ff1e4c5e076ba5fd231eae5b91ca 108 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 48 62 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 UPTC3659_RS02935 a308ff1e4c5e076ba5fd231eae5b91ca 108 SUPERFAMILY SSF54211 3 106 1.21E-22 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS02935 a308ff1e4c5e076ba5fd231eae5b91ca 108 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 8 104 3.4E-17 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 UPTC3659_RS02935 a308ff1e4c5e076ba5fd231eae5b91ca 108 Gene3D G3DSA:3.30.230.10 11 106 1.9E-23 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS02935 a308ff1e4c5e076ba5fd231eae5b91ca 108 Pfam PF00825 Ribonuclease P 10 104 8.7E-22 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 UPTC3659_RS02935 a308ff1e4c5e076ba5fd231eae5b91ca 108 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 12 97 8.0E-20 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 SMART SM00649 9 140 4.2E-77 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 PANTHER PTHR11661 1 141 4.1E-59 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-16 T 23-04-2016 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 Gene3D G3DSA:3.30.1550.10 2 71 4.5E-37 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 Gene3D G3DSA:1.10.10.250 72 140 3.7E-25 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 28.787 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 SUPERFAMILY SSF54747 3 71 2.35E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.9E-61 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.3E-20 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 SUPERFAMILY SSF46906 67 139 4.19E-23 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02340 5581d82be218982bda6a5485a08e7bd1 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 4.4E-29 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal UPTC3659_RS01020 c52cdb310aa4993a009452f6fed4fc12 260 PANTHER PTHR13696:SF52 1 259 6.0E-72 T 23-04-2016 UPTC3659_RS01020 c52cdb310aa4993a009452f6fed4fc12 260 Gene3D G3DSA:3.40.50.300 4 259 2.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01020 c52cdb310aa4993a009452f6fed4fc12 260 PANTHER PTHR13696 1 259 6.0E-72 T 23-04-2016 UPTC3659_RS01020 c52cdb310aa4993a009452f6fed4fc12 260 SUPERFAMILY SSF52540 1 260 4.08E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01020 c52cdb310aa4993a009452f6fed4fc12 260 Pfam PF13614 AAA domain 3 179 1.0E-65 T 23-04-2016 IPR025669 AAA domain UPTC3659_RS01620 3290ef950f4697ec6e5e32bc1984da47 343 Gene3D G3DSA:3.40.50.720 2 193 1.9E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01620 3290ef950f4697ec6e5e32bc1984da47 343 PANTHER PTHR10366 4 334 2.6E-62 T 23-04-2016 UPTC3659_RS01620 3290ef950f4697ec6e5e32bc1984da47 343 PANTHER PTHR10366:SF427 4 334 2.6E-62 T 23-04-2016 UPTC3659_RS01620 3290ef950f4697ec6e5e32bc1984da47 343 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 325 3.6E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01620 3290ef950f4697ec6e5e32bc1984da47 343 SUPERFAMILY SSF51735 3 332 3.1E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01620 3290ef950f4697ec6e5e32bc1984da47 343 Gene3D G3DSA:3.90.25.10 197 333 4.2E-16 T 23-04-2016 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 360 497 7.6E-23 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 SUPERFAMILY SSF54211 604 790 1.29E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 SUPERFAMILY SSF52540 321 578 1.63E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 692 711 1.7E-46 T 23-04-2016 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 745 763 1.7E-46 T 23-04-2016 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 604 620 1.7E-46 T 23-04-2016 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 364 383 1.7E-46 T 23-04-2016 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 722 741 1.7E-46 T 23-04-2016 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 SMART SM00464 12 201 2.3E-44 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 12 200 6.8E-20 T 23-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 Gene3D G3DSA:3.30.230.10 598 791 1.2E-69 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 Gene3D G3DSA:3.40.50.300 320 508 2.4E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 Hamap MF_01973 Lon protease [lon]. 13 792 58.069 T 23-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 Gene3D G3DSA:1.10.8.60 509 593 2.5E-31 T 23-04-2016 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 579 791 7.4E-79 T 23-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 PIRSF PIRSF001174 1 792 0.0 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 TIGRFAM TIGR00763 lon: endopeptidase La 14 791 5.8E-262 T 23-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 PANTHER PTHR10046:SF24 1 791 7.8E-295 T 23-04-2016 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 SMART SM00382 356 501 1.5E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 PANTHER PTHR10046 1 791 7.8E-295 T 23-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 SUPERFAMILY SSF88697 10 110 8.2E-20 T 23-04-2016 IPR015947 PUA-like domain UPTC3659_RS05900 204fa9174e1162e27fd58495b3667299 792 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 695 703 - T 23-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 UPTC3659_RS07405 e91d6f726cda4f5edb57a79b09bd38bb 375 PANTHER PTHR12526 1 374 2.8E-41 T 23-04-2016 UPTC3659_RS07405 e91d6f726cda4f5edb57a79b09bd38bb 375 Pfam PF13477 Glycosyl transferase 4-like 14 151 3.6E-11 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain UPTC3659_RS07405 e91d6f726cda4f5edb57a79b09bd38bb 375 Pfam PF00534 Glycosyl transferases group 1 200 350 3.3E-32 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 UPTC3659_RS07405 e91d6f726cda4f5edb57a79b09bd38bb 375 Gene3D G3DSA:3.40.50.2000 187 349 3.1E-19 T 23-04-2016 UPTC3659_RS07405 e91d6f726cda4f5edb57a79b09bd38bb 375 SUPERFAMILY SSF53756 18 372 4.89E-61 T 23-04-2016 UPTC3659_RS02070 875e7fab2879ef5b6c2976d8f38d4865 249 Pfam PF09674 Protein of unknown function (DUF2400) 25 240 3.0E-69 T 23-04-2016 IPR014127 Conserved hypothetical protein CHP02757 UPTC3659_RS02070 875e7fab2879ef5b6c2976d8f38d4865 249 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 21 242 2.2E-78 T 23-04-2016 IPR014127 Conserved hypothetical protein CHP02757 UPTC3659_RS07150 74b996f5c93e7b6e64d22331302222bd 330 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 13 80 3.1E-16 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 UPTC3659_RS07150 74b996f5c93e7b6e64d22331302222bd 330 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 1 329 45.677 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 UPTC3659_RS07150 74b996f5c93e7b6e64d22331302222bd 330 SUPERFAMILY SSF55681 96 330 8.62E-73 T 23-04-2016 UPTC3659_RS07150 74b996f5c93e7b6e64d22331302222bd 330 Pfam PF01409 tRNA synthetases class II core domain (F) 86 329 1.8E-95 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 UPTC3659_RS07150 74b996f5c93e7b6e64d22331302222bd 330 SUPERFAMILY SSF46589 5 88 1.94E-14 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 UPTC3659_RS07150 74b996f5c93e7b6e64d22331302222bd 330 PANTHER PTHR11538 94 330 5.6E-94 T 23-04-2016 UPTC3659_RS07150 74b996f5c93e7b6e64d22331302222bd 330 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 35 329 1.9E-96 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 UPTC3659_RS07150 74b996f5c93e7b6e64d22331302222bd 330 Gene3D G3DSA:3.30.930.10 3 330 1.6E-116 T 23-04-2016 UPTC3659_RS01325 17758a4cd14639a1a167a506f5acf9cf 387 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 167 207 1.1E-15 T 23-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 UPTC3659_RS01325 17758a4cd14639a1a167a506f5acf9cf 387 Gene3D G3DSA:3.30.60.70 167 207 9.1E-22 T 23-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 UPTC3659_RS01325 17758a4cd14639a1a167a506f5acf9cf 387 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 22 387 42.27 T 23-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 UPTC3659_RS01325 17758a4cd14639a1a167a506f5acf9cf 387 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 291 322 1.7E-12 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS01325 17758a4cd14639a1a167a506f5acf9cf 387 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 7 165 3.2E-49 T 23-04-2016 UPTC3659_RS01325 17758a4cd14639a1a167a506f5acf9cf 387 Gene3D G3DSA:2.160.10.10 214 387 2.0E-32 T 23-04-2016 UPTC3659_RS01325 17758a4cd14639a1a167a506f5acf9cf 387 SUPERFAMILY SSF51161 117 329 2.63E-36 T 23-04-2016 IPR011004 Trimeric LpxA-like UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 PANTHER PTHR30302:SF1 1 167 1.9E-38 T 23-04-2016 UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 Pfam PF01750 Hydrogenase maturation protease 20 150 1.3E-27 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 PANTHER PTHR30302 1 167 1.9E-38 T 23-04-2016 UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 Gene3D G3DSA:3.40.50.1450 2 164 1.8E-54 T 23-04-2016 IPR023430 Peptidase HybD-like domain UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 151 9.5E-39 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 PRINTS PR00446 Hydrogen uptake protein signature 3 15 1.7E-13 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 PRINTS PR00446 Hydrogen uptake protein signature 15 26 1.7E-13 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 PRINTS PR00446 Hydrogen uptake protein signature 38 55 1.7E-13 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 PRINTS PR00446 Hydrogen uptake protein signature 59 69 1.7E-13 T 23-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 UPTC3659_RS04115 4c7c4fcc555256405fee0db314c54645 177 SUPERFAMILY SSF53163 2 163 1.94E-41 T 23-04-2016 IPR023430 Peptidase HybD-like domain UPTC3659_RS07045 27c23e1da66a03b558ab5f53790828b9 186 Pfam PF01583 Adenylylsulphate kinase 13 162 2.2E-32 T 23-04-2016 UPTC3659_RS07045 27c23e1da66a03b558ab5f53790828b9 186 Gene3D G3DSA:3.40.50.300 5 179 1.1E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07045 27c23e1da66a03b558ab5f53790828b9 186 PANTHER PTHR11055:SF23 7 160 6.7E-25 T 23-04-2016 UPTC3659_RS07045 27c23e1da66a03b558ab5f53790828b9 186 PANTHER PTHR11055 7 160 6.7E-25 T 23-04-2016 UPTC3659_RS07045 27c23e1da66a03b558ab5f53790828b9 186 SUPERFAMILY SSF52540 10 180 5.92E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01025 262d8cc8980f44a6ec050291f90d552d 283 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 31 204 2.6E-54 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 UPTC3659_RS01025 262d8cc8980f44a6ec050291f90d552d 283 SMART SM00470 34 124 9.6E-30 T 23-04-2016 IPR003115 ParB/Sulfiredoxin UPTC3659_RS01025 262d8cc8980f44a6ec050291f90d552d 283 SUPERFAMILY SSF110849 32 170 5.75E-32 T 23-04-2016 IPR003115 ParB/Sulfiredoxin UPTC3659_RS01025 262d8cc8980f44a6ec050291f90d552d 283 Gene3D G3DSA:3.90.1530.10 28 130 2.4E-36 T 23-04-2016 UPTC3659_RS01025 262d8cc8980f44a6ec050291f90d552d 283 PANTHER PTHR33375 7 283 8.4E-75 T 23-04-2016 UPTC3659_RS01025 262d8cc8980f44a6ec050291f90d552d 283 PANTHER PTHR33375:SF3 7 283 8.4E-75 T 23-04-2016 UPTC3659_RS01025 262d8cc8980f44a6ec050291f90d552d 283 Pfam PF02195 ParB-like nuclease domain 34 124 4.0E-24 T 23-04-2016 IPR003115 ParB/Sulfiredoxin UPTC3659_RS06765 30bdf6cf69ed3c5d4a7163cbe3f9b88c 451 Pfam PF04055 Radical SAM superfamily 51 222 1.6E-17 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS06765 30bdf6cf69ed3c5d4a7163cbe3f9b88c 451 Gene3D G3DSA:3.80.30.20 46 278 1.7E-28 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe UPTC3659_RS06765 30bdf6cf69ed3c5d4a7163cbe3f9b88c 451 PANTHER PTHR13932 9 444 3.5E-189 T 23-04-2016 UPTC3659_RS06765 30bdf6cf69ed3c5d4a7163cbe3f9b88c 451 SUPERFAMILY SSF102114 9 437 1.57E-125 T 23-04-2016 UPTC3659_RS06765 30bdf6cf69ed3c5d4a7163cbe3f9b88c 451 PANTHER PTHR13932:SF6 9 444 3.5E-189 T 23-04-2016 UPTC3659_RS06765 30bdf6cf69ed3c5d4a7163cbe3f9b88c 451 Pfam PF06969 HemN C-terminal domain 358 423 4.2E-9 T 23-04-2016 IPR010723 HemN, C-terminal UPTC3659_RS06765 30bdf6cf69ed3c5d4a7163cbe3f9b88c 451 PIRSF PIRSF000167 1 447 6.7E-162 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 UPTC3659_RS06765 30bdf6cf69ed3c5d4a7163cbe3f9b88c 451 SMART SM00729 45 267 3.5E-55 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS06765 30bdf6cf69ed3c5d4a7163cbe3f9b88c 451 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 4 451 2.1E-186 T 23-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 UPTC3659_RS06770 f7c913359bed9a20ad85e7919bc65079 422 Gene3D G3DSA:1.10.1060.10 9 96 4.5E-15 T 23-04-2016 UPTC3659_RS06770 f7c913359bed9a20ad85e7919bc65079 422 Pfam PF13534 4Fe-4S dicluster domain 10 76 3.2E-9 T 23-04-2016 UPTC3659_RS06770 f7c913359bed9a20ad85e7919bc65079 422 Pfam PF02754 Cysteine-rich domain 176 259 8.3E-15 T 23-04-2016 IPR004017 Cysteine-rich domain UPTC3659_RS06770 f7c913359bed9a20ad85e7919bc65079 422 Pfam PF02754 Cysteine-rich domain 313 396 1.1E-11 T 23-04-2016 IPR004017 Cysteine-rich domain UPTC3659_RS06770 f7c913359bed9a20ad85e7919bc65079 422 PANTHER PTHR32479 1 411 9.6E-61 T 23-04-2016 UPTC3659_RS06770 f7c913359bed9a20ad85e7919bc65079 422 PIRSF PIRSF000139 1 422 3.0E-122 T 23-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit UPTC3659_RS06770 f7c913359bed9a20ad85e7919bc65079 422 SUPERFAMILY SSF46548 9 89 4.97E-15 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 UPTC3659_RS06770 f7c913359bed9a20ad85e7919bc65079 422 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS06770 f7c913359bed9a20ad85e7919bc65079 422 PANTHER PTHR32479:SF13 1 411 9.6E-61 T 23-04-2016 UPTC3659_RS06370 72a932f65d89439b46e74f3ea9d51526 687 Gene3D G3DSA:3.40.50.300 280 387 6.3E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06370 72a932f65d89439b46e74f3ea9d51526 687 Gene3D G3DSA:3.40.50.300 542 622 6.3E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06370 72a932f65d89439b46e74f3ea9d51526 687 PANTHER PTHR11070:SF7 5 624 9.2E-165 T 23-04-2016 UPTC3659_RS06370 72a932f65d89439b46e74f3ea9d51526 687 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 271 8.4E-63 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 UPTC3659_RS06370 72a932f65d89439b46e74f3ea9d51526 687 Gene3D G3DSA:3.40.50.300 6 275 9.6E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06370 72a932f65d89439b46e74f3ea9d51526 687 PANTHER PTHR11070 5 624 9.2E-165 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 UPTC3659_RS06370 72a932f65d89439b46e74f3ea9d51526 687 SUPERFAMILY SSF52540 4 622 2.36E-144 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06370 72a932f65d89439b46e74f3ea9d51526 687 Gene3D G3DSA:1.10.486.10 388 532 2.0E-34 T 23-04-2016 UPTC3659_RS06370 72a932f65d89439b46e74f3ea9d51526 687 Pfam PF13361 UvrD-like helicase C-terminal domain 277 604 1.2E-68 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 UPTC3659_RS08025 48e0cd8aafbab98a1e2b5709dff142ce 190 Gene3D G3DSA:3.40.50.300 2 170 2.9E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08025 48e0cd8aafbab98a1e2b5709dff142ce 190 PIRSF PIRSF006755 1 180 7.0E-29 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS08025 48e0cd8aafbab98a1e2b5709dff142ce 190 PANTHER PTHR21343:SF0 1 152 2.1E-28 T 23-04-2016 UPTC3659_RS08025 48e0cd8aafbab98a1e2b5709dff142ce 190 PANTHER PTHR21343 1 152 2.1E-28 T 23-04-2016 UPTC3659_RS08025 48e0cd8aafbab98a1e2b5709dff142ce 190 SUPERFAMILY SSF52540 2 172 1.31E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08025 48e0cd8aafbab98a1e2b5709dff142ce 190 Pfam PF13500 AAA domain 2 166 1.8E-26 T 23-04-2016 UPTC3659_RS08025 48e0cd8aafbab98a1e2b5709dff142ce 190 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 4 152 1.0E-25 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS08025 48e0cd8aafbab98a1e2b5709dff142ce 190 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 175 19.22 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 UPTC3659_RS07525 c39385aef78f1b0c3eb6ef9e6850d78e 205 PANTHER PTHR11067 1 204 7.5E-43 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 UPTC3659_RS07525 c39385aef78f1b0c3eb6ef9e6850d78e 205 Pfam PF01725 Ham1 family 7 190 6.8E-43 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 UPTC3659_RS07525 c39385aef78f1b0c3eb6ef9e6850d78e 205 SUPERFAMILY SSF52972 4 192 2.62E-50 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like UPTC3659_RS07525 c39385aef78f1b0c3eb6ef9e6850d78e 205 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 5 198 40.823 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 UPTC3659_RS07525 c39385aef78f1b0c3eb6ef9e6850d78e 205 Gene3D G3DSA:3.90.950.10 4 191 4.1E-53 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like UPTC3659_RS07525 c39385aef78f1b0c3eb6ef9e6850d78e 205 PANTHER PTHR11067:SF9 1 204 7.5E-43 T 23-04-2016 UPTC3659_RS06685 2efc136051061606c407b5c149008457 1076 PANTHER PTHR30071:SF5 756 1075 1.8E-66 T 23-04-2016 UPTC3659_RS06685 2efc136051061606c407b5c149008457 1076 Pfam PF01578 Cytochrome C assembly protein 832 1038 4.9E-44 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 UPTC3659_RS06685 2efc136051061606c407b5c149008457 1076 Pfam PF05140 ResB-like family 392 457 1.3E-9 T 23-04-2016 IPR007816 ResB-like domain UPTC3659_RS06685 2efc136051061606c407b5c149008457 1076 PANTHER PTHR30071 756 1075 1.8E-66 T 23-04-2016 UPTC3659_RS06685 2efc136051061606c407b5c149008457 1076 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 810 1041 4.4E-56 T 23-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 PANTHER PTHR23504 2 412 7.2E-90 T 23-04-2016 UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 Gene3D G3DSA:1.20.1250.20 3 183 1.5E-34 T 23-04-2016 UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 Gene3D G3DSA:1.20.1250.20 197 378 5.9E-28 T 23-04-2016 UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 SUPERFAMILY SSF103473 4 376 2.88E-67 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 PANTHER PTHR23504:SF37 2 412 7.2E-90 T 23-04-2016 UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 PRINTS PR01035 Tetracycline resistance protein signature 128 150 7.0E-5 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 PRINTS PR01035 Tetracycline resistance protein signature 98 119 7.0E-5 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 PRINTS PR01035 Tetracycline resistance protein signature 14 30 7.0E-5 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 PRINTS PR01035 Tetracycline resistance protein signature 265 286 7.0E-5 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UPTC3659_RS07520 8e6e9937284ffc0cda2f4acaef697a52 431 Pfam PF07690 Major Facilitator Superfamily 10 250 5.6E-37 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS01400 15fbd6677e44ca67f9d7c36acc11ff3e 278 Gene3D G3DSA:3.40.50.620 1 145 1.1E-12 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS01400 15fbd6677e44ca67f9d7c36acc11ff3e 278 PRINTS PR01438 Universal stress protein signature 238 250 2.3E-11 T 23-04-2016 IPR006015 Universal stress protein A UPTC3659_RS01400 15fbd6677e44ca67f9d7c36acc11ff3e 278 PRINTS PR01438 Universal stress protein signature 158 176 2.3E-11 T 23-04-2016 IPR006015 Universal stress protein A UPTC3659_RS01400 15fbd6677e44ca67f9d7c36acc11ff3e 278 PRINTS PR01438 Universal stress protein signature 256 278 2.3E-11 T 23-04-2016 IPR006015 Universal stress protein A UPTC3659_RS01400 15fbd6677e44ca67f9d7c36acc11ff3e 278 SUPERFAMILY SSF52402 158 278 7.28E-22 T 23-04-2016 UPTC3659_RS01400 15fbd6677e44ca67f9d7c36acc11ff3e 278 Pfam PF00582 Universal stress protein family 158 278 1.9E-11 T 23-04-2016 IPR006016 UspA GO:0006950 UPTC3659_RS01400 15fbd6677e44ca67f9d7c36acc11ff3e 278 SUPERFAMILY SSF52402 1 151 7.45E-12 T 23-04-2016 UPTC3659_RS01400 15fbd6677e44ca67f9d7c36acc11ff3e 278 PANTHER PTHR31964 144 278 4.3E-14 T 23-04-2016 UPTC3659_RS01400 15fbd6677e44ca67f9d7c36acc11ff3e 278 Gene3D G3DSA:3.40.50.620 146 278 5.9E-22 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS07355 1094f584a27ac610f336ed6d7da82332 384 Pfam PF00535 Glycosyl transferase family 2 6 85 9.0E-22 T 23-04-2016 IPR001173 Glycosyltransferase 2-like UPTC3659_RS07355 1094f584a27ac610f336ed6d7da82332 384 SUPERFAMILY SSF53448 130 279 1.25E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07355 1094f584a27ac610f336ed6d7da82332 384 SUPERFAMILY SSF53448 3 83 1.25E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07355 1094f584a27ac610f336ed6d7da82332 384 Gene3D G3DSA:3.90.550.10 1 84 3.8E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07355 1094f584a27ac610f336ed6d7da82332 384 Gene3D G3DSA:3.90.550.10 131 254 3.8E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07355 1094f584a27ac610f336ed6d7da82332 384 PANTHER PTHR22916:SF24 127 301 4.8E-42 T 23-04-2016 UPTC3659_RS07355 1094f584a27ac610f336ed6d7da82332 384 PANTHER PTHR22916:SF24 1 80 4.8E-42 T 23-04-2016 UPTC3659_RS07355 1094f584a27ac610f336ed6d7da82332 384 PANTHER PTHR22916 127 301 4.8E-42 T 23-04-2016 UPTC3659_RS07355 1094f584a27ac610f336ed6d7da82332 384 PANTHER PTHR22916 1 80 4.8E-42 T 23-04-2016 UPTC3659_RS06825 1129e27aff566a9cfcb42b972c92eca1 193 Gene3D G3DSA:3.40.50.2020 107 183 3.7E-8 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS06825 1129e27aff566a9cfcb42b972c92eca1 193 SUPERFAMILY SSF53271 53 188 1.85E-10 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS09000 73d287c5448d21a1dc519040d1ed12df 141 PANTHER PTHR34980 1 135 9.7E-12 T 23-04-2016 UPTC3659_RS09000 73d287c5448d21a1dc519040d1ed12df 141 Pfam PF05656 Protein of unknown function (DUF805) 13 109 1.6E-21 T 23-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 UPTC3659_RS00620 9c03de284b8f51d4d09773b3befe2263 413 SUPERFAMILY SSF103473 12 398 2.75E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS00620 9c03de284b8f51d4d09773b3befe2263 413 Gene3D G3DSA:1.20.1250.20 205 404 5.0E-11 T 23-04-2016 UPTC3659_RS00620 9c03de284b8f51d4d09773b3befe2263 413 Gene3D G3DSA:1.20.1250.20 15 199 3.7E-28 T 23-04-2016 UPTC3659_RS00620 9c03de284b8f51d4d09773b3befe2263 413 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 392 1.5E-90 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 UPTC3659_RS00620 9c03de284b8f51d4d09773b3befe2263 413 PANTHER PTHR23502:SF19 11 395 1.7E-100 T 23-04-2016 UPTC3659_RS00620 9c03de284b8f51d4d09773b3befe2263 413 PANTHER PTHR23502 11 395 1.7E-100 T 23-04-2016 UPTC3659_RS00620 9c03de284b8f51d4d09773b3befe2263 413 Pfam PF07690 Major Facilitator Superfamily 19 359 1.0E-42 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 Gene3D G3DSA:3.40.50.720 2 257 5.6E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 PANTHER PTHR24322 12 196 2.2E-25 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 SUPERFAMILY SSF51735 6 257 1.18E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 257 9.8E-61 T 23-04-2016 UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.6E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.6E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.6E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.6E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.6E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS03610 9e98ca06949ac66a0e7b426edb73a672 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 3.6E-30 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR UPTC3659_RS07545 631a849f41c7b9d7b87d67aefddb317a 248 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 24 244 1.4E-52 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 UPTC3659_RS07545 631a849f41c7b9d7b87d67aefddb317a 248 PANTHER PTHR30632 17 245 4.0E-30 T 23-04-2016 UPTC3659_RS07545 631a849f41c7b9d7b87d67aefddb317a 248 Pfam PF13531 Bacterial extracellular solute-binding protein 20 245 1.2E-36 T 23-04-2016 UPTC3659_RS07545 631a849f41c7b9d7b87d67aefddb317a 248 Gene3D G3DSA:3.40.190.10 19 121 8.0E-32 T 23-04-2016 UPTC3659_RS07545 631a849f41c7b9d7b87d67aefddb317a 248 SUPERFAMILY SSF53850 18 247 1.38E-47 T 23-04-2016 UPTC3659_RS07545 631a849f41c7b9d7b87d67aefddb317a 248 Gene3D G3DSA:3.40.190.10 122 207 2.6E-22 T 23-04-2016 UPTC3659_RS07545 631a849f41c7b9d7b87d67aefddb317a 248 PIRSF PIRSF004846 4 248 4.2E-51 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 PANTHER PTHR22916:SF24 1 80 5.2E-43 T 23-04-2016 UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 PANTHER PTHR22916:SF24 134 193 5.2E-43 T 23-04-2016 UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 PANTHER PTHR22916:SF24 209 307 5.2E-43 T 23-04-2016 UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 Gene3D G3DSA:3.90.550.10 1 84 9.2E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 Gene3D G3DSA:3.90.550.10 138 261 9.2E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 PANTHER PTHR22916 1 80 5.2E-43 T 23-04-2016 UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 PANTHER PTHR22916 134 193 5.2E-43 T 23-04-2016 UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 PANTHER PTHR22916 209 307 5.2E-43 T 23-04-2016 UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 Pfam PF00535 Glycosyl transferase family 2 6 85 1.6E-21 T 23-04-2016 IPR001173 Glycosyltransferase 2-like UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 SUPERFAMILY SSF53448 4 83 2.95E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07345 e3043314722b01e4f86dad38dee7ee93 389 SUPERFAMILY SSF53448 137 282 2.95E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS01590 b1aed70abc93baa77b6b5dbf207eb186 567 Gene3D G3DSA:1.50.10.110 79 235 1.4E-9 T 23-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 UPTC3659_RS01590 b1aed70abc93baa77b6b5dbf207eb186 567 SUPERFAMILY SSF48230 48 280 1.37E-21 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase UPTC3659_RS01590 b1aed70abc93baa77b6b5dbf207eb186 567 Pfam PF16889 Heparinase II/III N-terminus 22 295 1.5E-22 T 23-04-2016 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 UPTC3659_RS01590 b1aed70abc93baa77b6b5dbf207eb186 567 Pfam PF07940 Heparinase II/III-like protein 313 478 2.0E-14 T 23-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 UPTC3659_RS07620 8606b1b80071e65c6afcd11faa85ef07 149 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 4 148 1.1E-44 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 UPTC3659_RS07620 8606b1b80071e65c6afcd11faa85ef07 149 Pfam PF00364 Biotin-requiring enzyme 73 145 2.7E-19 T 23-04-2016 IPR000089 Biotin/lipoyl attachment UPTC3659_RS07620 8606b1b80071e65c6afcd11faa85ef07 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 93 107 9.2E-17 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 UPTC3659_RS07620 8606b1b80071e65c6afcd11faa85ef07 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 121 9.2E-17 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 UPTC3659_RS07620 8606b1b80071e65c6afcd11faa85ef07 149 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 76 89 9.2E-17 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 UPTC3659_RS07620 8606b1b80071e65c6afcd11faa85ef07 149 PANTHER PTHR23151:SF64 1 148 1.6E-32 T 23-04-2016 UPTC3659_RS07620 8606b1b80071e65c6afcd11faa85ef07 149 Gene3D G3DSA:2.40.50.100 69 147 3.5E-27 T 23-04-2016 UPTC3659_RS07620 8606b1b80071e65c6afcd11faa85ef07 149 PANTHER PTHR23151 1 148 1.6E-32 T 23-04-2016 UPTC3659_RS07620 8606b1b80071e65c6afcd11faa85ef07 149 SUPERFAMILY SSF51230 72 147 1.3E-21 T 23-04-2016 IPR011053 Single hybrid motif UPTC3659_RS06300 91e61682ba74aafe061c857825afdb5c 389 Gene3D G3DSA:3.40.1190.10 5 253 1.0E-61 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS06300 91e61682ba74aafe061c857825afdb5c 389 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 384 1.1E-82 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 UPTC3659_RS06300 91e61682ba74aafe061c857825afdb5c 389 SUPERFAMILY SSF53623 21 244 2.38E-52 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS06300 91e61682ba74aafe061c857825afdb5c 389 PANTHER PTHR11136 39 327 2.2E-52 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 UPTC3659_RS06300 91e61682ba74aafe061c857825afdb5c 389 Gene3D G3DSA:3.90.190.20 272 387 4.6E-15 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS06300 91e61682ba74aafe061c857825afdb5c 389 Pfam PF08245 Mur ligase middle domain 43 212 4.4E-9 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS06300 91e61682ba74aafe061c857825afdb5c 389 SUPERFAMILY SSF53244 271 386 6.41E-15 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS03690 ec97108bd376e78cb14acb7e639a4874 256 PANTHER PTHR30429 1 256 7.3E-120 T 23-04-2016 IPR004872 Lipoprotein NlpA family UPTC3659_RS03690 ec97108bd376e78cb14acb7e639a4874 256 PANTHER PTHR30429:SF0 1 256 7.3E-120 T 23-04-2016 UPTC3659_RS03690 ec97108bd376e78cb14acb7e639a4874 256 SUPERFAMILY SSF53850 23 256 4.89E-83 T 23-04-2016 UPTC3659_RS03690 ec97108bd376e78cb14acb7e639a4874 256 PIRSF PIRSF002854 4 256 1.7E-98 T 23-04-2016 IPR004872 Lipoprotein NlpA family UPTC3659_RS03690 ec97108bd376e78cb14acb7e639a4874 256 Pfam PF03180 NLPA lipoprotein 23 256 2.2E-91 T 23-04-2016 IPR004872 Lipoprotein NlpA family UPTC3659_RS03690 ec97108bd376e78cb14acb7e639a4874 256 Gene3D G3DSA:3.40.190.10 20 147 7.3E-53 T 23-04-2016 UPTC3659_RS03700 382dfebd03d38b3dd7f3ab77bb9bb0f1 221 SUPERFAMILY SSF161098 12 209 2.09E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03700 382dfebd03d38b3dd7f3ab77bb9bb0f1 221 PANTHER PTHR30450 1 221 6.4E-97 T 23-04-2016 UPTC3659_RS03700 382dfebd03d38b3dd7f3ab77bb9bb0f1 221 Gene3D G3DSA:1.10.3720.10 14 219 6.2E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03700 382dfebd03d38b3dd7f3ab77bb9bb0f1 221 PANTHER PTHR30450:SF1 1 221 6.4E-97 T 23-04-2016 UPTC3659_RS03700 382dfebd03d38b3dd7f3ab77bb9bb0f1 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 52 218 3.6E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS04910 65ceae471b80ad5c02abe904b96fa672 500 SUPERFAMILY SSF53474 7 20 7.94E-21 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS04910 65ceae471b80ad5c02abe904b96fa672 500 SUPERFAMILY SSF53474 65 211 7.94E-21 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS04910 65ceae471b80ad5c02abe904b96fa672 500 Gene3D G3DSA:3.40.50.1820 72 210 5.9E-22 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS04910 65ceae471b80ad5c02abe904b96fa672 500 Gene3D G3DSA:3.40.50.1820 4 34 5.9E-22 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS04910 65ceae471b80ad5c02abe904b96fa672 500 Pfam PF11187 Protein of unknown function (DUF2974) 73 202 6.5E-8 T 23-04-2016 IPR024499 Protein of unknown function DUF2974 UPTC3659_RS03590 7acdade3496832fc9836352058a5bd54 457 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 209 360 3.6E-34 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS03590 7acdade3496832fc9836352058a5bd54 457 PANTHER PTHR32089 35 113 4.0E-45 T 23-04-2016 UPTC3659_RS03590 7acdade3496832fc9836352058a5bd54 457 PANTHER PTHR32089 152 345 4.0E-45 T 23-04-2016 UPTC3659_RS03590 7acdade3496832fc9836352058a5bd54 457 Gene3D G3DSA:1.10.287.950 172 363 9.1E-44 T 23-04-2016 UPTC3659_RS03590 7acdade3496832fc9836352058a5bd54 457 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 251 278 1.6E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS03590 7acdade3496832fc9836352058a5bd54 457 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 1.6E-20 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS03590 7acdade3496832fc9836352058a5bd54 457 SUPERFAMILY SSF58104 166 391 5.23E-46 T 23-04-2016 UPTC3659_RS03590 7acdade3496832fc9836352058a5bd54 457 SUPERFAMILY SSF58104 93 112 5.23E-46 T 23-04-2016 UPTC3659_RS03590 7acdade3496832fc9836352058a5bd54 457 SMART SM00283 156 411 5.0E-24 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS02795 8ebaf57f6ef0ddbacae65981401055d6 168 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 21 88 1.4E-8 T 23-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like UPTC3659_RS02795 8ebaf57f6ef0ddbacae65981401055d6 168 SUPERFAMILY SSF89392 11 167 7.45E-26 T 23-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX UPTC3659_RS02795 8ebaf57f6ef0ddbacae65981401055d6 168 Gene3D G3DSA:2.50.20.10 20 167 6.8E-17 T 23-04-2016 UPTC3659_RS03075 3368a01d7fa58d4c6a750860f9e2303f 398 PANTHER PTHR23521:SF2 5 374 2.0E-59 T 23-04-2016 UPTC3659_RS03075 3368a01d7fa58d4c6a750860f9e2303f 398 Gene3D G3DSA:1.20.1250.20 9 184 7.7E-18 T 23-04-2016 UPTC3659_RS03075 3368a01d7fa58d4c6a750860f9e2303f 398 Gene3D G3DSA:1.20.1250.20 204 374 5.2E-17 T 23-04-2016 UPTC3659_RS03075 3368a01d7fa58d4c6a750860f9e2303f 398 PANTHER PTHR23521 5 374 2.0E-59 T 23-04-2016 UPTC3659_RS03075 3368a01d7fa58d4c6a750860f9e2303f 398 SUPERFAMILY SSF103473 9 374 1.57E-40 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS03075 3368a01d7fa58d4c6a750860f9e2303f 398 Pfam PF07690 Major Facilitator Superfamily 14 250 1.1E-15 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 4 74 2.5E-29 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 Gene3D G3DSA:2.40.50.140 4 80 1.1E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 4 70 1.0E-31 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 SUPERFAMILY SSF50249 4 80 3.68E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 PRINTS PR00973 Ribosomal protein S17 family signature 55 65 5.3E-10 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 PRINTS PR00973 Ribosomal protein S17 family signature 23 46 5.3E-10 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 PRINTS PR00973 Ribosomal protein S17 family signature 65 72 5.3E-10 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 PANTHER PTHR10744 5 83 1.0E-22 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 Pfam PF00366 Ribosomal protein S17 9 74 5.0E-26 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00430 17a654f22c7d7a4e80948a8a7f333831 83 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 2 80 20.993 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS07050 86bb25ba956677d1b3402da04826b82b 475 Pfam PF11186 Protein of unknown function (DUF2972) 270 475 3.6E-29 T 23-04-2016 IPR021353 Protein of unknown function DUF2972 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 Gene3D G3DSA:3.90.110.10 145 292 1.7E-32 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 PRINTS PR00086 L-lactate dehydrogenase signature 169 182 4.4E-24 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 PRINTS PR00086 L-lactate dehydrogenase signature 139 157 4.4E-24 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 4.4E-24 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 PRINTS PR00086 L-lactate dehydrogenase signature 115 135 4.4E-24 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 4.4E-24 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 SUPERFAMILY SSF56327 142 291 1.31E-31 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 145 291 1.4E-16 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 Gene3D G3DSA:3.40.50.720 1 142 7.9E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 PIRSF PIRSF000102 1 298 6.9E-81 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 PANTHER PTHR11540:SF16 1 292 1.9E-66 T 23-04-2016 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 140 3.0E-33 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 SUPERFAMILY SSF51735 1 141 6.99E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS04675 9750b2988ddfbcd27c14404a16a27965 298 PANTHER PTHR11540 1 292 1.9E-66 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UPTC3659_RS06075 0aff9325aa066e7d7d72bc50447dbe7a 75 Pfam PF00886 Ribosomal protein S16 8 66 5.3E-24 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06075 0aff9325aa066e7d7d72bc50447dbe7a 75 Gene3D G3DSA:3.30.1320.10 1 74 3.1E-29 T 23-04-2016 IPR023803 Ribosomal protein S16 domain UPTC3659_RS06075 0aff9325aa066e7d7d72bc50447dbe7a 75 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 73 4.8E-28 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06075 0aff9325aa066e7d7d72bc50447dbe7a 75 PANTHER PTHR12919 1 72 2.9E-32 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06075 0aff9325aa066e7d7d72bc50447dbe7a 75 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 75 21.566 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06075 0aff9325aa066e7d7d72bc50447dbe7a 75 SUPERFAMILY SSF54565 1 73 1.16E-28 T 23-04-2016 IPR023803 Ribosomal protein S16 domain UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 397 5.0E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 SMART SM00387 309 410 2.1E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 PANTHER PTHR24423:SF477 150 398 1.0E-22 T 23-04-2016 UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 PANTHER PTHR24423:SF477 1 7 1.0E-22 T 23-04-2016 UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 SMART SM00388 210 268 5.2E-6 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 SUPERFAMILY SSF47384 194 268 3.73E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 Gene3D G3DSA:3.30.565.10 281 396 1.3E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 SUPERFAMILY SSF55874 275 398 6.94E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 PANTHER PTHR24423 150 398 1.0E-22 T 23-04-2016 UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 PANTHER PTHR24423 1 7 1.0E-22 T 23-04-2016 UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 Pfam PF00672 HAMP domain 141 203 6.0E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 UPTC3659_RS04490 ccc083331772f8fb40eaf0584e0db320 413 Gene3D G3DSA:1.10.287.130 203 260 7.4E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 PIRSF PIRSF000804 1 355 4.5E-70 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 241 352 1.5E-11 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 SUPERFAMILY SSF55979 240 353 1.33E-17 T 23-04-2016 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 SUPERFAMILY SSF55979 1 119 1.62E-20 T 23-04-2016 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.3E-19 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 SMART SM00480 17 351 7.9E-60 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 353 1.3E-73 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 PANTHER PTHR30478 2 355 5.8E-61 T 23-04-2016 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 238 4.9E-17 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 Gene3D G3DSA:3.10.150.10 244 353 5.3E-14 T 23-04-2016 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 Gene3D G3DSA:3.10.150.10 122 243 1.2E-26 T 23-04-2016 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 Gene3D G3DSA:3.10.150.10 1 119 3.7E-18 T 23-04-2016 UPTC3659_RS00010 7c77309a51f02fe0fb645a247e77b005 355 SUPERFAMILY SSF55979 126 239 5.81E-21 T 23-04-2016 UPTC3659_RS04185 7afa51738e9458b2921729563f9cbaa7 322 Pfam PF11738 Protein of unknown function (DUF3298) 243 303 6.3E-8 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 UPTC3659_RS04185 7afa51738e9458b2921729563f9cbaa7 322 Gene3D G3DSA:3.30.565.40 117 227 3.6E-10 T 23-04-2016 IPR025303 Domain of unknown function DUF4163 UPTC3659_RS04185 7afa51738e9458b2921729563f9cbaa7 322 Gene3D G3DSA:3.90.640.20 238 317 7.7E-14 T 23-04-2016 IPR021729 Domain of unknown function DUF3298 UPTC3659_RS04185 7afa51738e9458b2921729563f9cbaa7 322 Pfam PF13739 Domain of unknown function (DUF4163) 125 215 2.1E-6 T 23-04-2016 IPR025303 Domain of unknown function DUF4163 UPTC3659_RS07320 3c401bb074d3650b54a4a130498c49e6 225 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 5 164 1.3E-35 T 23-04-2016 IPR002654 Glycosyl transferase, family 25 UPTC3659_RS07825 290b942dce7e8791f49b5044572e3696 233 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 140 154 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 UPTC3659_RS07825 290b942dce7e8791f49b5044572e3696 233 Gene3D G3DSA:3.40.50.150 7 226 5.0E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07825 290b942dce7e8791f49b5044572e3696 233 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 18 33 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 UPTC3659_RS07825 290b942dce7e8791f49b5044572e3696 233 SUPERFAMILY SSF53335 5 228 3.62E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07825 290b942dce7e8791f49b5044572e3696 233 PANTHER PTHR10108 2 227 2.6E-44 T 23-04-2016 UPTC3659_RS07825 290b942dce7e8791f49b5044572e3696 233 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 7 232 1.4E-76 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 UPTC3659_RS07825 290b942dce7e8791f49b5044572e3696 233 PANTHER PTHR10108:SF24 2 227 2.6E-44 T 23-04-2016 UPTC3659_RS07825 290b942dce7e8791f49b5044572e3696 233 Pfam PF01209 ubiE/COQ5 methyltransferase family 3 232 6.9E-50 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 UPTC3659_RS07825 290b942dce7e8791f49b5044572e3696 233 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 232 29.953 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 SUPERFAMILY SSF50621 408 538 8.37E-15 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 Gene3D G3DSA:2.40.37.10 316 340 9.8E-17 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 Gene3D G3DSA:2.40.37.10 432 555 9.8E-17 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PANTHER PTHR11482 4 350 2.0E-145 T 23-04-2016 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PANTHER PTHR11482 415 568 2.0E-145 T 23-04-2016 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 427 532 1.5E-22 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PIRSF PIRSF001336 1 606 2.3E-209 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PANTHER PTHR11482:SF36 4 350 2.0E-145 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PANTHER PTHR11482:SF36 415 568 2.0E-145 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 TIGRFAM TIGR01273 speA: arginine decarboxylase 3 604 1.9E-207 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 83 101 - T 23-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 Gene3D G3DSA:3.20.20.10 61 315 1.6E-48 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01180 Arginine decarboxylase signature 130 145 1.4E-38 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01180 Arginine decarboxylase signature 181 203 1.4E-38 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01180 Arginine decarboxylase signature 440 461 1.4E-38 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01180 Arginine decarboxylase signature 465 490 1.4E-38 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01180 Arginine decarboxylase signature 307 324 1.4E-38 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01180 Arginine decarboxylase signature 75 89 1.4E-38 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01180 Arginine decarboxylase signature 514 535 1.4E-38 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01180 Arginine decarboxylase signature 51 66 1.4E-38 T 23-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 62 328 4.5E-38 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 317 336 8.4E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 224 237 8.4E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 101 8.4E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 107 119 8.4E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 514 527 8.4E-17 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 UPTC3659_RS04320 ff197deb355f98b0e56c4bffa03f3f22 609 SUPERFAMILY SSF51419 52 329 1.2E-50 T 23-04-2016 IPR029066 PLP-binding barrel UPTC3659_RS00080 5d9dcdb7e7ee559bdaf114e13448db13 210 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 10 199 6.3E-48 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 UPTC3659_RS00080 5d9dcdb7e7ee559bdaf114e13448db13 210 PANTHER PTHR34934 1 199 2.9E-22 T 23-04-2016 UPTC3659_RS00080 5d9dcdb7e7ee559bdaf114e13448db13 210 Pfam PF02511 Thymidylate synthase complementing protein 5 190 1.3E-44 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 UPTC3659_RS00080 5d9dcdb7e7ee559bdaf114e13448db13 210 SUPERFAMILY SSF69796 1 202 1.7E-51 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 UPTC3659_RS00080 5d9dcdb7e7ee559bdaf114e13448db13 210 Hamap MF_01408 Thymidylate synthase ThyX [thyX]. 1 205 25.616 T 23-04-2016 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|KEGG: 00670+2.1.1.148|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6545|MetaCyc: PWY-6936|MetaCyc: PWY-702 UPTC3659_RS05805 d074077e5f7e4cb11d0c1892c1904954 134 Gene3D G3DSA:1.10.10.10 1 132 3.6E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS05805 d074077e5f7e4cb11d0c1892c1904954 134 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 3.9E-36 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type UPTC3659_RS05805 d074077e5f7e4cb11d0c1892c1904954 134 SUPERFAMILY SSF46785 4 132 2.73E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS05805 d074077e5f7e4cb11d0c1892c1904954 134 Pfam PF02082 Transcriptional regulator 1 81 2.3E-18 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 PANTHER PTHR12383 187 282 1.3E-54 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 PANTHER PTHR12383 18 59 1.3E-54 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 PANTHER PTHR12383 83 142 1.3E-54 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 Pfam PF00717 Peptidase S24-like 33 125 1.8E-17 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 206 225 6.4E-19 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 104 116 6.4E-19 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 27 43 6.4E-19 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 Gene3D G3DSA:2.10.109.10 206 254 2.7E-48 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 Gene3D G3DSA:2.10.109.10 24 114 2.7E-48 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 PANTHER PTHR12383:SF27 187 282 1.3E-54 T 23-04-2016 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 PANTHER PTHR12383:SF27 18 59 1.3E-54 T 23-04-2016 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 PANTHER PTHR12383:SF27 83 142 1.3E-54 T 23-04-2016 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 ProSitePatterns PS00761 Signal peptidases I signature 3. 211 224 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 SUPERFAMILY SSF51306 26 259 8.37E-56 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C UPTC3659_RS03105 8cf6ec60a5137cc3396349cd224b0780 282 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 16 246 4.8E-40 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UPTC3659_RS07560 017f9537307351f25737533bd622d2d9 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.6E-22 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 UPTC3659_RS07560 017f9537307351f25737533bd622d2d9 104 PANTHER PTHR30561 1 103 7.7E-26 T 23-04-2016 UPTC3659_RS07560 017f9537307351f25737533bd622d2d9 104 SUPERFAMILY SSF103481 5 102 9.94E-17 T 23-04-2016 UPTC3659_RS07560 017f9537307351f25737533bd622d2d9 104 PANTHER PTHR30561:SF1 1 103 7.7E-26 T 23-04-2016 UPTC3659_RS03015 abcb0d727c6f5ca6fde4de93be861aff 187 SUPERFAMILY SSF54637 39 142 1.71E-11 T 23-04-2016 IPR029069 HotDog domain UPTC3659_RS03015 abcb0d727c6f5ca6fde4de93be861aff 187 Gene3D G3DSA:3.10.129.10 25 150 5.3E-18 T 23-04-2016 IPR029069 HotDog domain UPTC3659_RS00915 63baa015c32531f993ab6f17bcd3a5f2 617 PANTHER PTHR41786 204 611 4.0E-19 T 23-04-2016 UPTC3659_RS00915 63baa015c32531f993ab6f17bcd3a5f2 617 Pfam PF01973 Protein of unknown function DUF115 206 380 8.1E-45 T 23-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like UPTC3659_RS00915 63baa015c32531f993ab6f17bcd3a5f2 617 PANTHER PTHR41786:SF1 204 611 4.0E-19 T 23-04-2016 UPTC3659_RS06750 224e0f046df9d544fc608e78557cf911 186 SUPERFAMILY SSF142695 2 155 7.06E-52 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 UPTC3659_RS06750 224e0f046df9d544fc608e78557cf911 186 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 7 185 6.6E-70 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 UPTC3659_RS06750 224e0f046df9d544fc608e78557cf911 186 Pfam PF00925 GTP cyclohydrolase II 9 155 4.8E-59 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 UPTC3659_RS06750 224e0f046df9d544fc608e78557cf911 186 PANTHER PTHR21327:SF6 2 185 1.0E-78 T 23-04-2016 UPTC3659_RS06750 224e0f046df9d544fc608e78557cf911 186 PANTHER PTHR21327 2 185 1.0E-78 T 23-04-2016 UPTC3659_RS07055 e93fafa9462c3738ad9eaa99e4f027fa 255 PANTHER PTHR10108 6 241 1.3E-22 T 23-04-2016 UPTC3659_RS07055 e93fafa9462c3738ad9eaa99e4f027fa 255 PANTHER PTHR10108:SF730 6 241 1.3E-22 T 23-04-2016 UPTC3659_RS07055 e93fafa9462c3738ad9eaa99e4f027fa 255 Pfam PF08241 Methyltransferase domain 43 134 6.9E-13 T 23-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 UPTC3659_RS07055 e93fafa9462c3738ad9eaa99e4f027fa 255 SUPERFAMILY SSF53335 5 237 1.84E-31 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07055 e93fafa9462c3738ad9eaa99e4f027fa 255 Gene3D G3DSA:3.40.50.150 21 250 2.7E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08655 e4640bc552caf756b2cedb655b000341 568 Pfam PF02120 Flagellar hook-length control protein FliK 456 531 5.9E-12 T 23-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal UPTC3659_RS06970 8288117067da3ea1e41fbafb3b04293e 473 Pfam PF04945 YHS domain 410 453 5.8E-9 T 23-04-2016 IPR007029 YHS domain UPTC3659_RS06970 8288117067da3ea1e41fbafb3b04293e 473 Pfam PF10080 Predicted membrane protein (DUF2318) 300 401 1.9E-28 T 23-04-2016 IPR018758 Domain of unknown function DUF2318, membrane UPTC3659_RS02655 d19a1d406d4f4675312e5e2196d874a7 452 PANTHER PTHR10283 35 452 3.0E-104 T 23-04-2016 UPTC3659_RS02655 d19a1d406d4f4675312e5e2196d874a7 452 PANTHER PTHR10283:SF91 35 452 3.0E-104 T 23-04-2016 UPTC3659_RS02655 d19a1d406d4f4675312e5e2196d874a7 452 Pfam PF03600 Citrate transporter 49 396 9.2E-39 T 23-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 Gene3D G3DSA:3.20.20.140 10 261 3.6E-84 T 23-04-2016 UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 PANTHER PTHR10060 11 265 7.4E-92 T 23-04-2016 IPR001130 TatD family GO:0016788 UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 PIRSF PIRSF005902 3 264 1.7E-75 T 23-04-2016 IPR001130 TatD family GO:0016788 UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 198 214 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 134 144 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 SUPERFAMILY SSF51556 10 261 4.23E-81 T 23-04-2016 IPR032466 Metal-dependent hydrolase UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 11 19 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 Pfam PF01026 TatD related DNase 12 261 2.6E-70 T 23-04-2016 IPR001130 TatD family GO:0016788 UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 PANTHER PTHR10060:SF20 11 265 7.4E-92 T 23-04-2016 UPTC3659_RS03750 01b44d97946afea6f566b5201a3e95b8 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 11 261 1.8E-79 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 PANTHER PTHR30244 326 495 5.7E-81 T 23-04-2016 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 PANTHER PTHR30244 3 181 5.7E-81 T 23-04-2016 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 SUPERFAMILY SSF64518 1 495 5.49E-93 T 23-04-2016 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 PANTHER PTHR30244:SF1 326 495 5.7E-81 T 23-04-2016 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 PANTHER PTHR30244:SF1 3 181 5.7E-81 T 23-04-2016 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 Pfam PF00700 Bacterial flagellin C-terminal helical region 409 494 9.3E-26 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 Pfam PF07196 Flagellin hook IN motif 187 240 2.7E-12 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 Pfam PF07196 Flagellin hook IN motif 252 302 1.6E-10 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 Gene3D G3DSA:1.20.1330.10 397 451 2.7E-41 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 Gene3D G3DSA:1.20.1330.10 54 171 2.7E-41 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.4E-41 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 PRINTS PR00207 Flagellin signature 37 54 8.6E-21 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 PRINTS PR00207 Flagellin signature 111 134 8.6E-21 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 UPTC3659_RS00900 0d1518149c8f47e50fbba3ca070ec2c2 495 PRINTS PR00207 Flagellin signature 76 95 8.6E-21 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 UPTC3659_RS00960 971b9c63e8096e32755cd8d7018b2f43 498 SUPERFAMILY SSF53067 130 296 5.68E-36 T 23-04-2016 UPTC3659_RS00960 971b9c63e8096e32755cd8d7018b2f43 498 Gene3D G3DSA:3.30.420.150 131 295 3.5E-33 T 23-04-2016 UPTC3659_RS00960 971b9c63e8096e32755cd8d7018b2f43 498 PANTHER PTHR30005 6 417 4.1E-72 T 23-04-2016 UPTC3659_RS00960 971b9c63e8096e32755cd8d7018b2f43 498 Pfam PF02541 Ppx/GppA phosphatase family 19 295 2.2E-55 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 UPTC3659_RS00960 971b9c63e8096e32755cd8d7018b2f43 498 Gene3D G3DSA:3.30.420.40 3 125 3.8E-32 T 23-04-2016 UPTC3659_RS00960 971b9c63e8096e32755cd8d7018b2f43 498 PIRSF PIRSF001267 1 486 3.9E-74 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 UPTC3659_RS00960 971b9c63e8096e32755cd8d7018b2f43 498 SUPERFAMILY SSF53067 5 127 4.96E-29 T 23-04-2016 UPTC3659_RS00960 971b9c63e8096e32755cd8d7018b2f43 498 SUPERFAMILY SSF109604 321 479 1.69E-22 T 23-04-2016 UPTC3659_RS07420 4ce0e779de0ef9ba12cdb558dd0e8db8 386 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 378 3.7E-83 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase UPTC3659_RS07420 4ce0e779de0ef9ba12cdb558dd0e8db8 386 PIRSF PIRSF000390 1 386 1.5E-88 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase UPTC3659_RS07420 4ce0e779de0ef9ba12cdb558dd0e8db8 386 PANTHER PTHR30244 1 290 5.9E-114 T 23-04-2016 UPTC3659_RS07420 4ce0e779de0ef9ba12cdb558dd0e8db8 386 PANTHER PTHR30244 313 386 5.9E-114 T 23-04-2016 UPTC3659_RS07420 4ce0e779de0ef9ba12cdb558dd0e8db8 386 PANTHER PTHR30244:SF18 1 290 5.9E-114 T 23-04-2016 UPTC3659_RS07420 4ce0e779de0ef9ba12cdb558dd0e8db8 386 PANTHER PTHR30244:SF18 313 386 5.9E-114 T 23-04-2016 UPTC3659_RS07420 4ce0e779de0ef9ba12cdb558dd0e8db8 386 Gene3D G3DSA:3.40.640.10 4 243 6.7E-92 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS07420 4ce0e779de0ef9ba12cdb558dd0e8db8 386 SUPERFAMILY SSF53383 3 385 4.54E-94 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS07420 4ce0e779de0ef9ba12cdb558dd0e8db8 386 Gene3D G3DSA:3.90.1150.10 245 385 1.0E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS03570 2cb163026da63537daf3ad2ddd62cc39 365 PANTHER PTHR32332:SF18 74 361 5.3E-152 T 23-04-2016 UPTC3659_RS03570 2cb163026da63537daf3ad2ddd62cc39 365 PANTHER PTHR32332:SF18 2 50 5.3E-152 T 23-04-2016 UPTC3659_RS03570 2cb163026da63537daf3ad2ddd62cc39 365 SUPERFAMILY SSF51412 7 362 8.55E-49 T 23-04-2016 UPTC3659_RS03570 2cb163026da63537daf3ad2ddd62cc39 365 Pfam PF03060 Nitronate monooxygenase 6 361 5.0E-84 T 23-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 UPTC3659_RS03570 2cb163026da63537daf3ad2ddd62cc39 365 Gene3D G3DSA:3.20.20.70 7 356 3.9E-51 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS03570 2cb163026da63537daf3ad2ddd62cc39 365 PANTHER PTHR32332 74 361 5.3E-152 T 23-04-2016 UPTC3659_RS03570 2cb163026da63537daf3ad2ddd62cc39 365 PANTHER PTHR32332 2 50 5.3E-152 T 23-04-2016 UPTC3659_RS06120 8d29d1b8289d7cb8fea6d055278153c1 418 SUPERFAMILY SSF51412 13 145 4.39E-6 T 23-04-2016 UPTC3659_RS06120 8d29d1b8289d7cb8fea6d055278153c1 418 Pfam PF01136 Peptidase family U32 77 305 3.6E-79 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- UPTC3659_RS06120 8d29d1b8289d7cb8fea6d055278153c1 418 PANTHER PTHR30217 1 321 1.8E-114 T 23-04-2016 UPTC3659_RS06120 8d29d1b8289d7cb8fea6d055278153c1 418 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- UPTC3659_RS06120 8d29d1b8289d7cb8fea6d055278153c1 418 PANTHER PTHR30217:SF6 1 321 1.8E-114 T 23-04-2016 UPTC3659_RS02875 193b03539e1af49693adf8ca2a4f2d6e 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 15 151 9.4E-52 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS02875 193b03539e1af49693adf8ca2a4f2d6e 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 29.604 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS02875 193b03539e1af49693adf8ca2a4f2d6e 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 150 2.1E-54 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS02875 193b03539e1af49693adf8ca2a4f2d6e 156 SUPERFAMILY SSF52121 7 154 4.19E-57 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS02875 193b03539e1af49693adf8ca2a4f2d6e 156 PANTHER PTHR21058 1 156 7.0E-70 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS02875 193b03539e1af49693adf8ca2a4f2d6e 156 Gene3D G3DSA:3.40.50.960 3 154 3.1E-59 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 UPTC3659_RS03045 7451bac84a03123d30cd1702a27a8f71 711 SMART SM00869 447 694 3.1E-19 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS03045 7451bac84a03123d30cd1702a27a8f71 711 SUPERFAMILY SSF103515 443 711 4.71E-35 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS03045 7451bac84a03123d30cd1702a27a8f71 711 Pfam PF03797 Autotransporter beta-domain 445 684 2.4E-29 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS03045 7451bac84a03123d30cd1702a27a8f71 711 Gene3D G3DSA:2.40.128.130 427 711 3.6E-29 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS03950 ce256b2f225d45cee1cd51aadbc68e08 397 PANTHER PTHR23513 1 391 1.1E-36 T 23-04-2016 UPTC3659_RS03950 ce256b2f225d45cee1cd51aadbc68e08 397 SUPERFAMILY SSF103473 9 395 3.14E-35 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS03950 ce256b2f225d45cee1cd51aadbc68e08 397 Pfam PF07690 Major Facilitator Superfamily 17 356 2.3E-22 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS03950 ce256b2f225d45cee1cd51aadbc68e08 397 Gene3D G3DSA:1.20.1250.20 228 393 3.3E-7 T 23-04-2016 UPTC3659_RS03950 ce256b2f225d45cee1cd51aadbc68e08 397 Gene3D G3DSA:1.20.1250.20 10 190 1.2E-16 T 23-04-2016 UPTC3659_RS03465 66210d77a215fd1259121fdb93df16a5 242 Gene3D G3DSA:3.40.50.300 1 237 2.0E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03465 66210d77a215fd1259121fdb93df16a5 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS03465 66210d77a215fd1259121fdb93df16a5 242 SMART SM00382 26 213 3.3E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS03465 66210d77a215fd1259121fdb93df16a5 242 Pfam PF00005 ABC transporter 17 165 1.0E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS03465 66210d77a215fd1259121fdb93df16a5 242 PANTHER PTHR24220:SF327 3 241 1.1E-131 T 23-04-2016 UPTC3659_RS03465 66210d77a215fd1259121fdb93df16a5 242 PIRSF PIRSF039085 1 241 1.4E-106 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 UPTC3659_RS03465 66210d77a215fd1259121fdb93df16a5 242 SUPERFAMILY SSF52540 1 235 4.58E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03465 66210d77a215fd1259121fdb93df16a5 242 PANTHER PTHR24220 3 241 1.1E-131 T 23-04-2016 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 Gene3D G3DSA:1.10.720.10 20 66 5.6E-17 T 23-04-2016 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 SUPERFAMILY SSF52540 110 387 2.0E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 PANTHER PTHR15184 1 434 3.3E-173 T 23-04-2016 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 SUPERFAMILY SSF50249 68 142 4.17E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 Gene3D G3DSA:2.40.50.140 68 136 2.8E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 SUPERFAMILY SSF68912 20 66 8.24E-10 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 434 211.476 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 PANTHER PTHR15184:SF34 1 434 3.3E-173 T 23-04-2016 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 SMART SM00357 71 137 1.8E-14 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 Pfam PF07497 Rho termination factor, RNA-binding domain 71 141 9.7E-27 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 SMART SM00382 186 375 1.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 Gene3D G3DSA:3.40.50.300 151 432 2.8E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 SMART SM00959 24 66 1.2E-14 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 Pfam PF07498 Rho termination factor, N-terminal domain 24 66 6.5E-14 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 176 379 1.3E-21 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 UPTC3659_RS02510 16900994255636dcc1dbe34614d47ccc 434 TIGRFAM TIGR00767 rho: transcription termination factor Rho 21 433 4.1E-202 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 PIRSF PIRSF001492 1 492 2.5E-184 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 284 1.7E-65 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 Gene3D G3DSA:3.40.720.10 4 76 1.7E-74 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 Gene3D G3DSA:3.40.720.10 299 487 1.7E-74 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 Pfam PF01676 Metalloenzyme superfamily 4 481 3.2E-68 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 492 41.939 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 Gene3D G3DSA:3.40.1450.10 77 295 8.2E-74 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 PANTHER PTHR31637 1 487 9.5E-208 T 23-04-2016 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 SUPERFAMILY SSF53649 4 76 2.74E-64 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 SUPERFAMILY SSF53649 295 487 2.74E-64 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 3 488 6.7E-192 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS01435 b6583663c14210e5e29ee71c90d24503 492 SUPERFAMILY SSF64158 76 293 6.41E-70 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 UPTC3659_RS00935 e7f7b459c38f7719661e3b0431bab5c3 611 Gene3D G3DSA:3.90.1480.10 227 491 8.9E-13 T 23-04-2016 UPTC3659_RS00935 e7f7b459c38f7719661e3b0431bab5c3 611 PANTHER PTHR41786:SF1 73 610 7.4E-17 T 23-04-2016 UPTC3659_RS00935 e7f7b459c38f7719661e3b0431bab5c3 611 Pfam PF01973 Protein of unknown function DUF115 200 374 1.3E-44 T 23-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like UPTC3659_RS00935 e7f7b459c38f7719661e3b0431bab5c3 611 PANTHER PTHR41786 73 610 7.4E-17 T 23-04-2016 UPTC3659_RS07910 1962391f89c21c9c013c5e55d6e094a0 207 SUPERFAMILY SSF56784 1 207 1.47E-53 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS07910 1962391f89c21c9c013c5e55d6e094a0 207 Gene3D G3DSA:1.10.150.210 16 72 6.3E-23 T 23-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 UPTC3659_RS07910 1962391f89c21c9c013c5e55d6e094a0 207 Gene3D G3DSA:3.40.50.1000 1 15 2.2E-31 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS07910 1962391f89c21c9c013c5e55d6e094a0 207 Gene3D G3DSA:3.40.50.1000 73 207 2.2E-31 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS07910 1962391f89c21c9c013c5e55d6e094a0 207 PANTHER PTHR10000:SF7 7 207 5.3E-61 T 23-04-2016 UPTC3659_RS07910 1962391f89c21c9c013c5e55d6e094a0 207 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 3 207 3.3E-74 T 23-04-2016 UPTC3659_RS07910 1962391f89c21c9c013c5e55d6e094a0 207 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 176 3.9E-17 T 23-04-2016 UPTC3659_RS07910 1962391f89c21c9c013c5e55d6e094a0 207 PANTHER PTHR10000 7 207 5.3E-61 T 23-04-2016 UPTC3659_RS07910 1962391f89c21c9c013c5e55d6e094a0 207 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 174 5.4E-28 T 23-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 PANTHER PTHR30265 4 175 3.3E-55 T 23-04-2016 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 PRINTS PR00338 Transcription termination factor NUSG signature 133 148 3.7E-13 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 3.7E-13 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 PRINTS PR00338 Transcription termination factor NUSG signature 151 167 3.7E-13 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 ProSitePatterns PS01014 Transcription termination factor nusG signature. 158 167 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 175 20.923 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 SMART SM00738 2 110 2.4E-39 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 Gene3D G3DSA:3.30.70.940 3 112 2.3E-34 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 Pfam PF02357 Transcription termination factor nusG 4 106 4.0E-23 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 175 1.5E-56 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 SUPERFAMILY SSF82679 3 112 1.44E-31 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 SUPERFAMILY SSF50104 119 175 2.01E-14 T 23-04-2016 IPR008991 Translation protein SH3-like domain UPTC3659_RS02335 0dff6b3907b81a5db0a674718c80048b 176 Gene3D G3DSA:2.30.30.30 115 175 8.8E-25 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 PANTHER PTHR33746 31 215 4.0E-61 T 23-04-2016 UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 3 33 3.1E-10 T 23-04-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 SUPERFAMILY SSF57802 175 210 4.38E-11 T 23-04-2016 UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 Gene3D G3DSA:1.20.1260.10 38 169 3.3E-43 T 23-04-2016 IPR012347 Ferritin-related UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 SUPERFAMILY SSF47240 41 171 3.36E-32 T 23-04-2016 IPR009078 Ferritin-like superfamily UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 Gene3D G3DSA:2.60.40.730 1 37 3.7E-7 T 23-04-2016 UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 PANTHER PTHR33746:SF1 31 215 4.0E-61 T 23-04-2016 UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 Gene3D G3DSA:2.20.28.10 173 211 1.6E-16 T 23-04-2016 IPR004039 Rubredoxin-type fold UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 3 35 1.7E-11 T 23-04-2016 IPR004462 Desulfoferrodoxin Dfx GO:0005506 UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 Pfam PF02915 Rubrerythrin 44 163 1.3E-21 T 23-04-2016 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 UPTC3659_RS00495 84e939603a2fef288eedd3b9eff678ff 215 SUPERFAMILY SSF57802 1 36 2.35E-10 T 23-04-2016 UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 Pfam PF00009 Elongation factor Tu GTP binding domain 4 134 4.3E-25 T 23-04-2016 UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 SUPERFAMILY SSF46785 543 599 5.17E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 SUPERFAMILY SSF50447 170 256 2.43E-15 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 PANTHER PTHR23115:SF129 4 343 3.2E-74 T 23-04-2016 UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 Pfam PF09107 Elongation factor SelB, winged helix 556 586 4.1E-8 T 23-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 SUPERFAMILY SSF52540 4 190 2.63E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 585 1.8E-75 T 23-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 Gene3D G3DSA:3.40.50.300 4 168 5.7E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 157 3.1E-12 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 PANTHER PTHR23115 4 343 3.2E-74 T 23-04-2016 UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 Gene3D G3DSA:1.10.10.10 545 586 1.1E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS07575 4a8bedd54583662b86933449ed717059 601 Gene3D G3DSA:2.40.30.10 175 256 1.4E-19 T 23-04-2016 UPTC3659_RS01915 71affdd1cc66949a2bde3dabe9fb82fa 75 SUPERFAMILY SSF64307 4 74 1.19E-21 T 23-04-2016 IPR001455 TusA-like domain UPTC3659_RS01915 71affdd1cc66949a2bde3dabe9fb82fa 75 PANTHER PTHR33279 1 75 1.6E-21 T 23-04-2016 UPTC3659_RS01915 71affdd1cc66949a2bde3dabe9fb82fa 75 Pfam PF01206 Sulfurtransferase TusA 6 74 5.8E-19 T 23-04-2016 IPR001455 TusA-like domain UPTC3659_RS01915 71affdd1cc66949a2bde3dabe9fb82fa 75 Gene3D G3DSA:3.30.110.40 4 74 5.5E-28 T 23-04-2016 IPR001455 TusA-like domain UPTC3659_RS01915 71affdd1cc66949a2bde3dabe9fb82fa 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 23-04-2016 IPR001455 TusA-like domain UPTC3659_RS02100 d0b3d542d6b67ae25243cb897d2acd51 218 SUPERFAMILY SSF53335 36 215 1.52E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS02100 d0b3d542d6b67ae25243cb897d2acd51 218 PIRSF PIRSF004553 33 218 7.8E-33 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 UPTC3659_RS02100 d0b3d542d6b67ae25243cb897d2acd51 218 Pfam PF03602 Conserved hypothetical protein 95 36 215 3.5E-33 T 23-04-2016 UPTC3659_RS02100 d0b3d542d6b67ae25243cb897d2acd51 218 Gene3D G3DSA:3.40.50.150 26 216 2.4E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 Gene3D G3DSA:3.90.230.10 110 341 2.6E-70 T 23-04-2016 IPR000994 Peptidase M24, structural domain UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 93 3.6E-5 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 SUPERFAMILY SSF55920 70 341 2.09E-60 T 23-04-2016 IPR000994 Peptidase M24, structural domain UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 Pfam PF00557 Metallopeptidase family M24 118 333 6.2E-54 T 23-04-2016 IPR000994 Peptidase M24, structural domain UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 PANTHER PTHR10804:SF110 108 341 1.1E-68 T 23-04-2016 UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 SUPERFAMILY SSF53092 3 94 3.92E-6 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 281 293 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 PRINTS PR00599 Methionine aminopeptidase-1 signature 171 184 1.4E-6 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 PRINTS PR00599 Methionine aminopeptidase-1 signature 303 315 1.4E-6 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 209 1.4E-6 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 Gene3D G3DSA:3.40.350.10 3 94 2.0E-9 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal UPTC3659_RS01235 3b4ef38ffb714079a36458921e0d26c5 341 PANTHER PTHR10804 108 341 1.1E-68 T 23-04-2016 UPTC3659_RS03675 c2c7e337b0361cbce1d9cb0f1f0f6870 233 PRINTS PR01008 Flagellar L-ring protein signature 173 189 1.44E-17 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 UPTC3659_RS03675 c2c7e337b0361cbce1d9cb0f1f0f6870 233 PRINTS PR01008 Flagellar L-ring protein signature 147 162 1.44E-17 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 UPTC3659_RS03675 c2c7e337b0361cbce1d9cb0f1f0f6870 233 PRINTS PR01008 Flagellar L-ring protein signature 68 80 1.44E-17 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 UPTC3659_RS03675 c2c7e337b0361cbce1d9cb0f1f0f6870 233 PRINTS PR01008 Flagellar L-ring protein signature 210 224 1.44E-17 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 UPTC3659_RS03675 c2c7e337b0361cbce1d9cb0f1f0f6870 233 PRINTS PR01008 Flagellar L-ring protein signature 194 208 1.44E-17 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 UPTC3659_RS03675 c2c7e337b0361cbce1d9cb0f1f0f6870 233 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 231 25.07 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 UPTC3659_RS03675 c2c7e337b0361cbce1d9cb0f1f0f6870 233 PANTHER PTHR34933 41 233 3.1E-40 T 23-04-2016 UPTC3659_RS03675 c2c7e337b0361cbce1d9cb0f1f0f6870 233 Pfam PF02107 Flagellar L-ring protein 47 232 7.5E-54 T 23-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 UPTC3659_RS03675 c2c7e337b0361cbce1d9cb0f1f0f6870 233 PANTHER PTHR34933:SF1 41 233 3.1E-40 T 23-04-2016 UPTC3659_RS06050 477297e3c8b33268622507027dc3fd84 111 SUPERFAMILY SSF51182 26 95 1.25E-7 T 23-04-2016 IPR011051 RmlC-like cupin domain UPTC3659_RS06050 477297e3c8b33268622507027dc3fd84 111 Gene3D G3DSA:2.60.120.10 31 98 1.5E-9 T 23-04-2016 IPR014710 RmlC-like jelly roll fold UPTC3659_RS04065 2ca03f88ec97f00181133a336ac6e479 229 Pfam PF01553 Acyltransferase 62 176 3.6E-23 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 UPTC3659_RS04065 2ca03f88ec97f00181133a336ac6e479 229 SMART SM00563 66 179 1.6E-33 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 UPTC3659_RS04065 2ca03f88ec97f00181133a336ac6e479 229 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 62 176 3.7E-31 T 23-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 UPTC3659_RS04065 2ca03f88ec97f00181133a336ac6e479 229 Gene3D G3DSA:3.40.1130.10 67 212 7.6E-23 T 23-04-2016 UPTC3659_RS04065 2ca03f88ec97f00181133a336ac6e479 229 PANTHER PTHR10434 7 223 8.2E-37 T 23-04-2016 UPTC3659_RS04065 2ca03f88ec97f00181133a336ac6e479 229 SUPERFAMILY SSF69593 10 223 1.07E-42 T 23-04-2016 UPTC3659_RS01520 a625dfa8d912664dbb84ba42df1247fb 221 Pfam PF03070 TENA/THI-4/PQQC family 11 216 4.4E-45 T 23-04-2016 IPR004305 Thiaminase-2/PQQC UPTC3659_RS01520 a625dfa8d912664dbb84ba42df1247fb 221 PANTHER PTHR20858 1 181 2.6E-45 T 23-04-2016 UPTC3659_RS01520 a625dfa8d912664dbb84ba42df1247fb 221 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 216 3.7E-45 T 23-04-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 UPTC3659_RS01520 a625dfa8d912664dbb84ba42df1247fb 221 Gene3D G3DSA:1.20.910.10 2 218 5.7E-63 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 UPTC3659_RS01520 a625dfa8d912664dbb84ba42df1247fb 221 SUPERFAMILY SSF48613 3 217 1.26E-60 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 UPTC3659_RS01945 aea06e5b607f603b3dcacc6c45351dde 183 Pfam PF04368 Protein of unknown function (DUF507) 1 182 6.5E-70 T 23-04-2016 IPR007463 Protein of unknown function DUF507 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 Gene3D G3DSA:3.40.50.800 472 564 1.2E-17 T 23-04-2016 IPR004154 Anticodon-binding UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 PANTHER PTHR11451:SF3 4 244 1.0E-132 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 PANTHER PTHR11451:SF3 397 565 1.0E-132 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.4E-12 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.4E-12 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.4E-12 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.4E-12 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 SUPERFAMILY SSF55826 218 371 6.93E-20 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 SUPERFAMILY SSF55681 406 473 6.93E-93 T 23-04-2016 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 SUPERFAMILY SSF55681 11 237 6.93E-93 T 23-04-2016 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 Gene3D G3DSA:3.30.930.10 394 471 3.5E-99 T 23-04-2016 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 Gene3D G3DSA:3.30.930.10 12 234 3.5E-99 T 23-04-2016 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 1.6E-50 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 SUPERFAMILY SSF52954 462 565 2.72E-21 T 23-04-2016 IPR004154 Anticodon-binding UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 PANTHER PTHR11451 4 244 1.0E-132 T 23-04-2016 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 PANTHER PTHR11451 397 565 1.0E-132 T 23-04-2016 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 Pfam PF04073 Aminoacyl-tRNA editing domain 258 372 1.2E-19 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 Gene3D G3DSA:3.90.960.10 250 393 1.4E-20 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 563 2.5E-215 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 565 36.451 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UPTC3659_RS04430 ad04e5a1019daf5b36b176c3c742eb4c 565 Pfam PF03129 Anticodon binding domain 477 563 2.7E-13 T 23-04-2016 IPR004154 Anticodon-binding UPTC3659_RS05910 13f60e64129f4442e78881a58d0cec26 164 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 105 8.9E-8 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS05910 13f60e64129f4442e78881a58d0cec26 164 Gene3D G3DSA:3.30.450.20 12 108 9.1E-19 T 23-04-2016 UPTC3659_RS05910 13f60e64129f4442e78881a58d0cec26 164 PANTHER PTHR32089:SF52 22 134 2.7E-18 T 23-04-2016 UPTC3659_RS05910 13f60e64129f4442e78881a58d0cec26 164 PANTHER PTHR32089 22 134 2.7E-18 T 23-04-2016 UPTC3659_RS05910 13f60e64129f4442e78881a58d0cec26 164 Pfam PF08447 PAS fold 23 108 4.0E-13 T 23-04-2016 IPR013655 PAS fold-3 GO:0005515 UPTC3659_RS05910 13f60e64129f4442e78881a58d0cec26 164 SUPERFAMILY SSF55785 15 109 5.93E-23 T 23-04-2016 IPR000014 PAS domain UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 450 456 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 Gene3D G3DSA:3.40.50.150 400 463 3.0E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 Gene3D G3DSA:3.40.50.150 301 343 3.0E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 Gene3D G3DSA:3.40.50.150 519 624 3.0E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 SUPERFAMILY SSF53335 516 648 3.24E-73 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 SUPERFAMILY SSF53335 167 355 3.24E-73 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 SUPERFAMILY SSF53335 395 461 3.24E-73 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 27 144 6.4E-25 T 23-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 Pfam PF02384 N-6 DNA Methylase 279 468 2.8E-23 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 Pfam PF02384 N-6 DNA Methylase 531 633 1.8E-8 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PANTHER PTHR30195 369 463 5.5E-30 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PANTHER PTHR30195 526 649 5.5E-30 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PANTHER PTHR30195 482 510 5.5E-30 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PANTHER PTHR30195 242 334 5.5E-30 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PANTHER PTHR30195:SF2 369 463 5.5E-30 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PANTHER PTHR30195:SF2 526 649 5.5E-30 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PANTHER PTHR30195:SF2 482 510 5.5E-30 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PANTHER PTHR30195:SF2 242 334 5.5E-30 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 532 556 9.6E-22 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 447 459 9.6E-22 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 315 9.6E-22 T 23-04-2016 UPTC3659_RS01810 2f35c6dca18fc4649f32fdd3123424a7 750 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 323 337 9.6E-22 T 23-04-2016 UPTC3659_RS02290 667edf2d6b8f3df7861828c2fce78e20 246 PANTHER PTHR30283:SF3 2 220 3.5E-17 T 23-04-2016 UPTC3659_RS02290 667edf2d6b8f3df7861828c2fce78e20 246 PANTHER PTHR30283 2 220 3.5E-17 T 23-04-2016 UPTC3659_RS02290 667edf2d6b8f3df7861828c2fce78e20 246 Pfam PF03883 Protein of unknown function (DUF328) 1 220 8.8E-39 T 23-04-2016 IPR005583 Peroxide stress protein YaaA UPTC3659_RS00220 ce0c2ac1201e216197d61f025bbbb750 498 SUPERFAMILY SSF52540 32 171 4.11E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00220 ce0c2ac1201e216197d61f025bbbb750 498 Pfam PF01926 50S ribosome-binding GTPase 51 155 8.8E-16 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS00220 ce0c2ac1201e216197d61f025bbbb750 498 Gene3D G3DSA:3.40.50.300 296 343 7.9E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00220 ce0c2ac1201e216197d61f025bbbb750 498 Gene3D G3DSA:3.40.50.300 30 168 4.8E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07365 3d389baa821954a45aa8d61496dcb1bc 290 PANTHER PTHR30606 5 283 6.4E-49 T 23-04-2016 UPTC3659_RS07365 3d389baa821954a45aa8d61496dcb1bc 290 PANTHER PTHR30606:SF2 5 283 6.4E-49 T 23-04-2016 UPTC3659_RS07365 3d389baa821954a45aa8d61496dcb1bc 290 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 283 2.1E-49 T 23-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 UPTC3659_RS06990 b1989b4a4902418400fe08b6fbaaceca 285 SUPERFAMILY SSF56752 6 278 7.19E-67 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 UPTC3659_RS06990 b1989b4a4902418400fe08b6fbaaceca 285 Gene3D G3DSA:3.30.470.10 6 120 6.3E-33 T 23-04-2016 UPTC3659_RS06990 b1989b4a4902418400fe08b6fbaaceca 285 PANTHER PTHR11825:SF38 1 278 4.8E-94 T 23-04-2016 UPTC3659_RS06990 b1989b4a4902418400fe08b6fbaaceca 285 Pfam PF01063 Amino-transferase class IV 33 252 4.5E-39 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 UPTC3659_RS06990 b1989b4a4902418400fe08b6fbaaceca 285 PANTHER PTHR11825 1 278 4.8E-94 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 UPTC3659_RS06990 b1989b4a4902418400fe08b6fbaaceca 285 Gene3D G3DSA:3.20.10.10 128 281 8.6E-38 T 23-04-2016 UPTC3659_RS07985 dea95f80674fe4b677c04d37808feb57 217 Gene3D G3DSA:3.40.50.720 10 158 1.3E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07985 dea95f80674fe4b677c04d37808feb57 217 Gene3D G3DSA:3.40.50.720 191 215 1.3E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07985 dea95f80674fe4b677c04d37808feb57 217 PANTHER PTHR10953:SF145 1 147 8.2E-30 T 23-04-2016 UPTC3659_RS07985 dea95f80674fe4b677c04d37808feb57 217 PANTHER PTHR10953:SF145 173 185 8.2E-30 T 23-04-2016 UPTC3659_RS07985 dea95f80674fe4b677c04d37808feb57 217 Pfam PF00899 ThiF family 14 137 4.9E-21 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 UPTC3659_RS07985 dea95f80674fe4b677c04d37808feb57 217 SUPERFAMILY SSF69572 1 215 6.54E-37 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 UPTC3659_RS07985 dea95f80674fe4b677c04d37808feb57 217 PANTHER PTHR10953 1 147 8.2E-30 T 23-04-2016 UPTC3659_RS07985 dea95f80674fe4b677c04d37808feb57 217 PANTHER PTHR10953 173 185 8.2E-30 T 23-04-2016 UPTC3659_RS00075 49056c6631a4c20b576ee4a9dbbbd985 69 Gene3D G3DSA:2.30.30.40 3 69 3.6E-31 T 23-04-2016 UPTC3659_RS00075 49056c6631a4c20b576ee4a9dbbbd985 69 PANTHER PTHR30305:SF3 3 69 8.6E-24 T 23-04-2016 UPTC3659_RS00075 49056c6631a4c20b576ee4a9dbbbd985 69 PANTHER PTHR30305 3 69 8.6E-24 T 23-04-2016 UPTC3659_RS00075 49056c6631a4c20b576ee4a9dbbbd985 69 SUPERFAMILY SSF82057 2 69 6.41E-25 T 23-04-2016 UPTC3659_RS00075 49056c6631a4c20b576ee4a9dbbbd985 69 Pfam PF03831 PhnA domain 3 69 5.6E-30 T 23-04-2016 IPR013988 PhnA protein, C-terminal UPTC3659_RS07675 e846f6de6fe0a5953f07e7c0ba031b9f 77 Gene3D G3DSA:1.10.1200.10 2 73 1.9E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain UPTC3659_RS07675 e846f6de6fe0a5953f07e7c0ba031b9f 77 Pfam PF00550 Phosphopantetheine attachment site 5 70 4.7E-6 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain UPTC3659_RS07675 e846f6de6fe0a5953f07e7c0ba031b9f 77 SUPERFAMILY SSF47336 3 73 1.31E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain UPTC3659_RS01290 9bc61adb648d4fbbec2146080f8d017b 300 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 16 288 1.8E-21 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 UPTC3659_RS01290 9bc61adb648d4fbbec2146080f8d017b 300 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 9 300 14.106 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 UPTC3659_RS01290 9bc61adb648d4fbbec2146080f8d017b 300 Pfam PF01867 CRISPR associated protein Cas1 13 241 1.5E-23 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 UPTC3659_RS01290 9bc61adb648d4fbbec2146080f8d017b 300 PANTHER PTHR34353 10 299 2.6E-31 T 23-04-2016 UPTC3659_RS01290 9bc61adb648d4fbbec2146080f8d017b 300 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 7 281 3.2E-94 T 23-04-2016 IPR019855 CRISPR-associated protein Cas1, NMENI subtype UPTC3659_RS01040 28f9c593a92a3329e7719ffa262dfe1a 173 Pfam PF00213 ATP synthase delta (OSCP) subunit 5 138 2.0E-21 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 UPTC3659_RS01040 28f9c593a92a3329e7719ffa262dfe1a 173 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 171 12.088 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 UPTC3659_RS01040 28f9c593a92a3329e7719ffa262dfe1a 173 SUPERFAMILY SSF47928 3 99 6.54E-18 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain UPTC3659_RS01040 28f9c593a92a3329e7719ffa262dfe1a 173 Gene3D G3DSA:1.10.520.20 3 98 3.3E-14 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain UPTC3659_RS01040 28f9c593a92a3329e7719ffa262dfe1a 173 PANTHER PTHR11910 3 137 4.2E-13 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 1.7E-11 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 1.7E-11 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00096 Glutamine amidotransferase superfamily signature 347 360 1.7E-11 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 SUPERFAMILY SSF52021 1 144 5.62E-48 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 Gene3D G3DSA:3.40.50.880 151 371 2.4E-62 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 372 41.989 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 Pfam PF00117 Glutamine amidotransferase class-I 191 370 3.4E-44 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 SUPERFAMILY SSF52317 151 371 8.58E-53 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 Gene3D G3DSA:3.50.30.20 1 143 2.7E-48 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PANTHER PTHR11405 1 371 9.7E-148 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00097 Anthranilate synthase component II signature 347 360 2.7E-7 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00097 Anthranilate synthase component II signature 263 274 2.7E-7 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00097 Anthranilate synthase component II signature 235 244 2.7E-7 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 SMART SM01097 1 131 1.4E-69 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 371 1.1E-138 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 2 130 4.1E-42 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 1.7E-30 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 189 203 1.7E-30 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 1.7E-30 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 1.7E-30 T 23-04-2016 UPTC3659_RS01950 9322e2697ad67b63d120a0a8642460b0 372 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 1.7E-30 T 23-04-2016 UPTC3659_RS06945 cbe6f0d910807cb7db44c7ff3248a1ed 155 Pfam PF00578 AhpC/TSA family 32 136 4.5E-7 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 UPTC3659_RS06945 cbe6f0d910807cb7db44c7ff3248a1ed 155 Gene3D G3DSA:3.40.30.10 3 152 1.8E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS06945 cbe6f0d910807cb7db44c7ff3248a1ed 155 SUPERFAMILY SSF52833 30 152 3.64E-16 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS00455 494a81bb74d276ffcb739311299e75ad 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00455 494a81bb74d276ffcb739311299e75ad 131 SUPERFAMILY SSF56047 1 131 2.35E-42 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00455 494a81bb74d276ffcb739311299e75ad 131 Pfam PF00410 Ribosomal protein S8 4 131 8.4E-46 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00455 494a81bb74d276ffcb739311299e75ad 131 Gene3D G3DSA:3.30.1370.30 1 71 2.8E-22 T 23-04-2016 UPTC3659_RS00455 494a81bb74d276ffcb739311299e75ad 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 27.765 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00455 494a81bb74d276ffcb739311299e75ad 131 PANTHER PTHR11758 1 131 1.2E-41 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00455 494a81bb74d276ffcb739311299e75ad 131 Gene3D G3DSA:3.30.1490.10 75 131 1.5E-24 T 23-04-2016 UPTC3659_RS00560 584f3e8b726313092439f4fe139f0352 130 Pfam PF00411 Ribosomal protein S11 19 129 3.8E-42 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00560 584f3e8b726313092439f4fe139f0352 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 31.584 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00560 584f3e8b726313092439f4fe139f0352 130 SUPERFAMILY SSF53137 14 130 2.09E-42 T 23-04-2016 UPTC3659_RS00560 584f3e8b726313092439f4fe139f0352 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 127 2.4E-52 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00560 584f3e8b726313092439f4fe139f0352 130 PANTHER PTHR11759 11 130 7.0E-55 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00560 584f3e8b726313092439f4fe139f0352 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 120 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site UPTC3659_RS00560 584f3e8b726313092439f4fe139f0352 130 Gene3D G3DSA:3.30.420.80 8 130 3.4E-49 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00560 584f3e8b726313092439f4fe139f0352 130 PIRSF PIRSF002131 1 130 1.8E-47 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS07390 3f0eb3ab9695cbe6287b63c1e9532ddb 354 SUPERFAMILY SSF53756 3 352 8.52E-62 T 23-04-2016 UPTC3659_RS07390 3f0eb3ab9695cbe6287b63c1e9532ddb 354 Gene3D G3DSA:3.40.50.2000 177 331 1.2E-19 T 23-04-2016 UPTC3659_RS07390 3f0eb3ab9695cbe6287b63c1e9532ddb 354 Pfam PF13439 Glycosyltransferase Family 4 13 154 2.6E-11 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain UPTC3659_RS07390 3f0eb3ab9695cbe6287b63c1e9532ddb 354 PANTHER PTHR12526 1 353 2.5E-44 T 23-04-2016 UPTC3659_RS07390 3f0eb3ab9695cbe6287b63c1e9532ddb 354 Pfam PF00534 Glycosyl transferases group 1 175 332 1.4E-33 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 UPTC3659_RS08880 31f9921be0ac1c146539d7a90e69e369 149 PIRSF PIRSF004638 2 149 8.9E-53 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 UPTC3659_RS08880 31f9921be0ac1c146539d7a90e69e369 149 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 149 4.0E-51 T 23-04-2016 IPR005265 Uncharacterised protein family UPF0093 UPTC3659_RS08880 31f9921be0ac1c146539d7a90e69e369 149 PANTHER PTHR40255 7 149 6.2E-38 T 23-04-2016 UPTC3659_RS08880 31f9921be0ac1c146539d7a90e69e369 149 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 9 149 1.0E-45 T 23-04-2016 IPR014351 Conserved hypothetical protein CHP00701 UPTC3659_RS02860 e4ac9ed75508c17e40ef31f65c7ece0a 309 SUPERFAMILY SSF103481 43 140 4.58E-14 T 23-04-2016 UPTC3659_RS02860 e4ac9ed75508c17e40ef31f65c7ece0a 309 SUPERFAMILY SSF103481 214 303 6.8E-7 T 23-04-2016 UPTC3659_RS02860 e4ac9ed75508c17e40ef31f65c7ece0a 309 PANTHER PTHR22911 6 307 4.2E-46 T 23-04-2016 UPTC3659_RS02860 e4ac9ed75508c17e40ef31f65c7ece0a 309 PANTHER PTHR22911:SF6 6 307 4.2E-46 T 23-04-2016 UPTC3659_RS02860 e4ac9ed75508c17e40ef31f65c7ece0a 309 Pfam PF00892 EamA-like transporter family 9 138 7.9E-18 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 PANTHER PTHR11014:SF3 131 408 1.6E-127 T 23-04-2016 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 PANTHER PTHR11014:SF3 2 98 1.6E-127 T 23-04-2016 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 Gene3D G3DSA:3.30.70.360 211 320 3.5E-37 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 Pfam PF07687 Peptidase dimerisation domain 211 298 5.4E-5 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 SUPERFAMILY SSF55031 210 320 2.72E-32 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 Gene3D G3DSA:3.40.630.10 324 407 8.7E-96 T 23-04-2016 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 Gene3D G3DSA:3.40.630.10 1 210 8.7E-96 T 23-04-2016 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 Pfam PF01546 Peptidase family M20/M25/M40 139 403 3.6E-9 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 PIRSF PIRSF037215 1 408 3.5E-148 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 405 4.9E-109 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 PANTHER PTHR11014 131 408 1.6E-127 T 23-04-2016 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 PANTHER PTHR11014 2 98 1.6E-127 T 23-04-2016 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 SUPERFAMILY SSF53187 2 211 3.83E-66 T 23-04-2016 UPTC3659_RS07965 7a3a01f6d8737feab4cdba91bfe2ea3f 408 SUPERFAMILY SSF53187 324 406 3.83E-66 T 23-04-2016 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 Pfam PF01555 DNA methylase 32 247 5.0E-51 T 23-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 35 41 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 PANTHER PTHR13370 58 276 1.7E-25 T 23-04-2016 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 PANTHER PTHR13370 15 41 1.7E-25 T 23-04-2016 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 SUPERFAMILY SSF53335 10 261 3.24E-56 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 Gene3D G3DSA:3.40.50.150 10 257 2.9E-58 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 PANTHER PTHR13370:SF8 58 276 1.7E-25 T 23-04-2016 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 PANTHER PTHR13370:SF8 15 41 1.7E-25 T 23-04-2016 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 208 226 1.4E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 231 251 1.4E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 79 99 1.4E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 31 45 1.4E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS08060 3e045a5feedeedb9d235e260d1fc808e 281 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 189 206 1.4E-28 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS00300 68aa922e2d331021e3723e89f994f7b5 123 Pfam PF01219 Prokaryotic diacylglycerol kinase 12 113 4.8E-30 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 UPTC3659_RS00300 68aa922e2d331021e3723e89f994f7b5 123 PANTHER PTHR34299 7 122 1.9E-26 T 23-04-2016 UPTC3659_RS00300 68aa922e2d331021e3723e89f994f7b5 123 PANTHER PTHR34299:SF1 7 122 1.9E-26 T 23-04-2016 UPTC3659_RS00300 68aa922e2d331021e3723e89f994f7b5 123 Gene3D G3DSA:1.10.3830.10 4 115 4.0E-36 T 23-04-2016 UPTC3659_RS00300 68aa922e2d331021e3723e89f994f7b5 123 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 66 77 - T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 UPTC3659_RS00925 40e008d7d8b67e0f2ee84d38d773d2b0 618 PANTHER PTHR41786:SF1 204 613 6.7E-22 T 23-04-2016 UPTC3659_RS00925 40e008d7d8b67e0f2ee84d38d773d2b0 618 Gene3D G3DSA:3.90.1480.10 233 497 3.6E-13 T 23-04-2016 UPTC3659_RS00925 40e008d7d8b67e0f2ee84d38d773d2b0 618 PANTHER PTHR41786 204 613 6.7E-22 T 23-04-2016 UPTC3659_RS00925 40e008d7d8b67e0f2ee84d38d773d2b0 618 Pfam PF01973 Protein of unknown function DUF115 206 380 1.3E-44 T 23-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like UPTC3659_RS06060 946ff31d5b08bf1180f61ae2f9c77cd9 234 PANTHER PTHR32125 1 231 1.8E-60 T 23-04-2016 UPTC3659_RS06060 946ff31d5b08bf1180f61ae2f9c77cd9 234 Gene3D G3DSA:1.10.1270.20 160 231 5.0E-18 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UPTC3659_RS06060 946ff31d5b08bf1180f61ae2f9c77cd9 234 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 231 1.5E-77 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UPTC3659_RS06060 946ff31d5b08bf1180f61ae2f9c77cd9 234 PANTHER PTHR32125:SF1 1 231 1.8E-60 T 23-04-2016 UPTC3659_RS06060 946ff31d5b08bf1180f61ae2f9c77cd9 234 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 234 74.86 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UPTC3659_RS06060 946ff31d5b08bf1180f61ae2f9c77cd9 234 Gene3D G3DSA:3.40.1280.10 1 159 7.6E-55 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UPTC3659_RS06060 946ff31d5b08bf1180f61ae2f9c77cd9 234 SUPERFAMILY SSF75217 1 231 1.24E-76 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases UPTC3659_RS06060 946ff31d5b08bf1180f61ae2f9c77cd9 234 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 9.9E-45 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UPTC3659_RS06060 946ff31d5b08bf1180f61ae2f9c77cd9 234 PIRSF PIRSF000386 1 233 7.9E-76 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UPTC3659_RS05615 d7a7f8c0bbc5b80737d1036ba8d32c56 427 SUPERFAMILY SSF51905 39 238 1.44E-15 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS05615 d7a7f8c0bbc5b80737d1036ba8d32c56 427 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 41 354 1.3E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS05615 d7a7f8c0bbc5b80737d1036ba8d32c56 427 Gene3D G3DSA:3.50.50.60 39 139 5.0E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS05615 d7a7f8c0bbc5b80737d1036ba8d32c56 427 PANTHER PTHR22912 187 314 4.3E-12 T 23-04-2016 UPTC3659_RS05615 d7a7f8c0bbc5b80737d1036ba8d32c56 427 Gene3D G3DSA:3.50.50.60 140 362 5.8E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS05615 d7a7f8c0bbc5b80737d1036ba8d32c56 427 SUPERFAMILY SSF51905 186 361 2.14E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS04345 48fd9e15dfca8ff693d270b6eac49f97 241 Gene3D G3DSA:3.40.50.300 3 231 2.5E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04345 48fd9e15dfca8ff693d270b6eac49f97 241 PANTHER PTHR24220 5 237 3.2E-124 T 23-04-2016 UPTC3659_RS04345 48fd9e15dfca8ff693d270b6eac49f97 241 PANTHER PTHR24220:SF497 5 237 3.2E-124 T 23-04-2016 UPTC3659_RS04345 48fd9e15dfca8ff693d270b6eac49f97 241 SUPERFAMILY SSF52540 4 235 5.2E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04345 48fd9e15dfca8ff693d270b6eac49f97 241 Pfam PF00005 ABC transporter 20 165 3.1E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS04345 48fd9e15dfca8ff693d270b6eac49f97 241 SMART SM00382 28 221 2.9E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS04345 48fd9e15dfca8ff693d270b6eac49f97 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 240 1.8E-104 T 23-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 UPTC3659_RS05100 542262385dc7ff8de724f827ff430948 231 SMART SM00248 124 154 28.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05100 542262385dc7ff8de724f827ff430948 231 SMART SM00248 48 80 1300.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05100 542262385dc7ff8de724f827ff430948 231 SMART SM00248 85 114 0.23 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05100 542262385dc7ff8de724f827ff430948 231 Pfam PF12796 Ankyrin repeats (3 copies) 60 153 4.6E-8 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05100 542262385dc7ff8de724f827ff430948 231 Gene3D G3DSA:1.25.40.20 58 183 5.9E-16 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05100 542262385dc7ff8de724f827ff430948 231 SUPERFAMILY SSF48403 55 172 1.35E-15 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05100 542262385dc7ff8de724f827ff430948 231 PANTHER PTHR24188 60 174 1.5E-14 T 23-04-2016 UPTC3659_RS04540 fa33a6163ae334796c9a67c074aa09e3 244 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 32 241 9.0E-88 T 23-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 UPTC3659_RS04540 fa33a6163ae334796c9a67c074aa09e3 244 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 59 219 1.0E-29 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain UPTC3659_RS04540 fa33a6163ae334796c9a67c074aa09e3 244 Gene3D G3DSA:3.40.50.300 66 223 5.0E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04540 fa33a6163ae334796c9a67c074aa09e3 244 PANTHER PTHR30134:SF0 1 240 1.0E-126 T 23-04-2016 UPTC3659_RS04540 fa33a6163ae334796c9a67c074aa09e3 244 SUPERFAMILY SSF52540 28 237 2.63E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS04540 fa33a6163ae334796c9a67c074aa09e3 244 PANTHER PTHR30134 1 240 1.0E-126 T 23-04-2016 UPTC3659_RS04540 fa33a6163ae334796c9a67c074aa09e3 244 PIRSF PIRSF005624 20 244 4.3E-92 T 23-04-2016 UPTC3659_RS05780 d4ee7bd73f66a66d9daef62400709162 260 Gene3D G3DSA:1.10.10.10 5 78 4.9E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS05780 d4ee7bd73f66a66d9daef62400709162 260 PANTHER PTHR34824 5 66 2.5E-12 T 23-04-2016 UPTC3659_RS05780 d4ee7bd73f66a66d9daef62400709162 260 SUPERFAMILY SSF46785 5 79 1.33E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS03055 754360f76ffb10cd3b7d93034ed0a03d 376 Gene3D G3DSA:3.60.21.10 155 325 5.1E-24 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like UPTC3659_RS03055 754360f76ffb10cd3b7d93034ed0a03d 376 Pfam PF00149 Calcineurin-like phosphoesterase 156 318 1.2E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 UPTC3659_RS03055 754360f76ffb10cd3b7d93034ed0a03d 376 PANTHER PTHR31302:SF7 39 376 9.6E-60 T 23-04-2016 UPTC3659_RS03055 754360f76ffb10cd3b7d93034ed0a03d 376 SUPERFAMILY SSF56300 152 374 6.68E-36 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like UPTC3659_RS03055 754360f76ffb10cd3b7d93034ed0a03d 376 PANTHER PTHR31302 39 376 9.6E-60 T 23-04-2016 UPTC3659_RS08320 585422fd2f9d74561d4c2c00d1a3705a 257 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS08320 585422fd2f9d74561d4c2c00d1a3705a 257 Gene3D G3DSA:3.40.50.300 1 246 4.1E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08320 585422fd2f9d74561d4c2c00d1a3705a 257 Pfam PF00005 ABC transporter 17 175 2.1E-19 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS08320 585422fd2f9d74561d4c2c00d1a3705a 257 PANTHER PTHR24220 3 247 4.3E-58 T 23-04-2016 UPTC3659_RS08320 585422fd2f9d74561d4c2c00d1a3705a 257 SUPERFAMILY SSF52540 2 249 1.68E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08320 585422fd2f9d74561d4c2c00d1a3705a 257 SMART SM00382 26 234 2.3E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 PANTHER PTHR22749:SF0 16 279 1.1E-35 T 23-04-2016 UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 Pfam PF06574 FAD synthetase 66 138 1.1E-6 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 Pfam PF06574 FAD synthetase 12 38 2.0E-5 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 SUPERFAMILY SSF82114 147 280 2.83E-29 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 PIRSF PIRSF004491 2 283 1.6E-53 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 Pfam PF01687 Riboflavin kinase 157 277 6.9E-22 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 PANTHER PTHR22749 16 279 1.1E-35 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 SMART SM00904 156 278 3.6E-30 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 Gene3D G3DSA:3.40.50.620 9 159 9.9E-23 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 Gene3D G3DSA:2.40.30.30 161 279 9.9E-23 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 UPTC3659_RS03875 e540a53ef555bee8dae44dc4361b277c 283 SUPERFAMILY SSF52374 17 159 2.48E-13 T 23-04-2016 UPTC3659_RS03680 8c15cfbb39f0f50cee7d63f0356f6d0e 489 Pfam PF01515 Phosphate acetyl/butaryl transferase 168 484 1.2E-123 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 UPTC3659_RS03680 8c15cfbb39f0f50cee7d63f0356f6d0e 489 Gene3D G3DSA:3.40.50.10750 301 460 4.4E-64 T 23-04-2016 UPTC3659_RS03680 8c15cfbb39f0f50cee7d63f0356f6d0e 489 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 183 483 4.5E-120 T 23-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 UPTC3659_RS03680 8c15cfbb39f0f50cee7d63f0356f6d0e 489 PANTHER PTHR23406:SF3 389 489 2.6E-48 T 23-04-2016 UPTC3659_RS03680 8c15cfbb39f0f50cee7d63f0356f6d0e 489 SUPERFAMILY SSF53659 170 487 8.22E-93 T 23-04-2016 UPTC3659_RS03680 8c15cfbb39f0f50cee7d63f0356f6d0e 489 PANTHER PTHR23406 389 489 2.6E-48 T 23-04-2016 UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 SUPERFAMILY SSF48695 48 272 3.92E-127 T 23-04-2016 IPR011031 Multihaem cytochrome UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 SUPERFAMILY SSF48695 314 559 3.92E-127 T 23-04-2016 IPR011031 Multihaem cytochrome UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 PANTHER PTHR30633 311 454 3.5E-71 T 23-04-2016 UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 PANTHER PTHR30633 187 265 3.5E-71 T 23-04-2016 UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 PANTHER PTHR30633 471 539 3.5E-71 T 23-04-2016 UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 PANTHER PTHR30633 1 168 3.5E-71 T 23-04-2016 UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 Gene3D G3DSA:1.10.710.10 187 264 1.8E-15 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 Gene3D G3DSA:1.10.710.10 142 153 1.8E-15 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 Gene3D G3DSA:1.10.710.10 335 411 1.8E-15 T 23-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 Gene3D G3DSA:1.20.140.10 412 558 3.2E-47 T 23-04-2016 UPTC3659_RS06215 157900448fe30a22ab43e3a495df27c1 605 Pfam PF02335 Cytochrome c552 54 583 1.7E-154 T 23-04-2016 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 2 99 3.7E-41 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 SMART SM01403 5 99 1.6E-50 T 23-04-2016 IPR027486 Ribosomal protein S10 domain UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 27 42 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 PANTHER PTHR11700 1 98 5.6E-46 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 Gene3D G3DSA:3.30.70.600 2 99 1.6E-41 T 23-04-2016 IPR027486 Ribosomal protein S10 domain UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 3.3E-19 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 PRINTS PR00971 Ribosomal protein S10 family signature 3 16 3.3E-19 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 3.3E-19 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 100 26.067 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 SUPERFAMILY SSF54999 3 98 6.02E-37 T 23-04-2016 IPR027486 Ribosomal protein S10 domain UPTC3659_RS00380 f40d8746ec93a15a6638f2debc72312a 103 Pfam PF00338 Ribosomal protein S10p/S20e 5 98 5.1E-35 T 23-04-2016 IPR027486 Ribosomal protein S10 domain UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 SUPERFAMILY SSF56235 2 221 1.54E-61 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 PANTHER PTHR11907 1 443 1.1E-200 T 23-04-2016 UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 Gene3D G3DSA:3.60.20.10 2 246 1.9E-61 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 PANTHER PTHR11907:SF0 1 443 1.1E-200 T 23-04-2016 UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 443 2.1E-155 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 Pfam PF13537 Glutamine amidotransferase domain 72 199 1.4E-19 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 Gene3D G3DSA:3.40.50.2020 259 425 5.9E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 SUPERFAMILY SSF53271 239 444 1.57E-64 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 PIRSF PIRSF000485 1 446 3.6E-159 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 445 42.55 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 UPTC3659_RS08130 1dcb720b01ad100caa0ecbea0e134f8f 446 Pfam PF00156 Phosphoribosyl transferase domain 260 378 1.8E-11 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 UPTC3659_RS05560 901933ad34ad82f55a736384c82f4585 199 Gene3D G3DSA:3.60.15.10 8 188 3.0E-44 T 23-04-2016 IPR001279 Metallo-beta-lactamase UPTC3659_RS05560 901933ad34ad82f55a736384c82f4585 199 SMART SM00849 12 178 1.9E-35 T 23-04-2016 IPR001279 Metallo-beta-lactamase UPTC3659_RS05560 901933ad34ad82f55a736384c82f4585 199 PANTHER PTHR11935 1 188 5.5E-44 T 23-04-2016 UPTC3659_RS05560 901933ad34ad82f55a736384c82f4585 199 SUPERFAMILY SSF56281 1 198 7.73E-45 T 23-04-2016 IPR001279 Metallo-beta-lactamase UPTC3659_RS05560 901933ad34ad82f55a736384c82f4585 199 Pfam PF00753 Metallo-beta-lactamase superfamily 13 178 4.0E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase UPTC3659_RS07640 9cc4bc6208c240bc7f9b4b9f27fa1986 431 PIRSF PIRSF015244 2 427 9.2E-176 T 23-04-2016 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like UPTC3659_RS07640 9cc4bc6208c240bc7f9b4b9f27fa1986 431 Pfam PF09940 Domain of unknown function (DUF2172) 61 151 7.5E-36 T 23-04-2016 IPR032610 Domain of unknown function DUF2172 UPTC3659_RS07640 9cc4bc6208c240bc7f9b4b9f27fa1986 431 Pfam PF16221 winged helix-turn-helix 354 425 6.4E-17 T 23-04-2016 IPR032622 UCP01524, winged helix-turn-helix domain UPTC3659_RS07640 9cc4bc6208c240bc7f9b4b9f27fa1986 431 SUPERFAMILY SSF53187 85 351 3.77E-36 T 23-04-2016 UPTC3659_RS07640 9cc4bc6208c240bc7f9b4b9f27fa1986 431 Gene3D G3DSA:3.40.630.10 224 350 8.1E-8 T 23-04-2016 UPTC3659_RS07640 9cc4bc6208c240bc7f9b4b9f27fa1986 431 Pfam PF16254 Domain of unknown function (DUF4910) 8 352 6.0E-99 T 23-04-2016 IPR032589 Domain of unknown function DUF4910 UPTC3659_RS07970 f8ec1c0d2f312a96d0f2ec3c3914a519 430 PANTHER PTHR42002 1 430 2.5E-62 T 23-04-2016 UPTC3659_RS07970 f8ec1c0d2f312a96d0f2ec3c3914a519 430 Pfam PF03606 C4-dicarboxylate anaerobic carrier 69 429 3.0E-28 T 23-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 UPTC3659_RS07970 f8ec1c0d2f312a96d0f2ec3c3914a519 430 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 63 423 6.8E-67 T 23-04-2016 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 UPTC3659_RS07245 fb4f8fbd4013b93245ab55ebbbb341ce 209 Gene3D G3DSA:3.40.50.10420 31 180 9.4E-28 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain UPTC3659_RS07245 fb4f8fbd4013b93245ab55ebbbb341ce 209 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 173 6.6E-32 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase UPTC3659_RS07245 fb4f8fbd4013b93245ab55ebbbb341ce 209 SUPERFAMILY SSF100950 10 187 3.21E-33 T 23-04-2016 UPTC3659_RS07245 fb4f8fbd4013b93245ab55ebbbb341ce 209 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 27 166 2.1E-15 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase UPTC3659_RS07245 fb4f8fbd4013b93245ab55ebbbb341ce 209 PANTHER PTHR23407 30 137 2.9E-16 T 23-04-2016 UPTC3659_RS07245 fb4f8fbd4013b93245ab55ebbbb341ce 209 PANTHER PTHR23407:SF1 30 137 2.9E-16 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase UPTC3659_RS07595 cc4c5e24f081180401d8122f411c4eba 221 Gene3D G3DSA:3.40.190.10 3 74 2.2E-25 T 23-04-2016 UPTC3659_RS07595 cc4c5e24f081180401d8122f411c4eba 221 Gene3D G3DSA:3.40.190.10 142 215 2.2E-25 T 23-04-2016 UPTC3659_RS07595 cc4c5e24f081180401d8122f411c4eba 221 Gene3D G3DSA:3.40.190.10 80 141 1.8E-7 T 23-04-2016 UPTC3659_RS07595 cc4c5e24f081180401d8122f411c4eba 221 SUPERFAMILY SSF53850 1 215 2.28E-49 T 23-04-2016 UPTC3659_RS07595 cc4c5e24f081180401d8122f411c4eba 221 Hamap MF_00995 Chorismate dehydratase [mqnA]. 2 221 21.41 T 23-04-2016 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374|UniPathway: UPA00079 UPTC3659_RS07595 cc4c5e24f081180401d8122f411c4eba 221 Pfam PF02621 Menaquinone biosynthesis 104 215 3.6E-11 T 23-04-2016 IPR003773 Menaquinone biosynthesis enzyme UniPathway: UPA00079 UPTC3659_RS08315 7f3c86781b8eeb5bcdf6e4920666bb92 223 SMART SM00382 37 221 1.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS08315 7f3c86781b8eeb5bcdf6e4920666bb92 223 Pfam PF00005 ABC transporter 29 177 2.3E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS08315 7f3c86781b8eeb5bcdf6e4920666bb92 223 PANTHER PTHR24220 4 222 4.5E-57 T 23-04-2016 UPTC3659_RS08315 7f3c86781b8eeb5bcdf6e4920666bb92 223 Gene3D G3DSA:3.40.50.300 2 222 2.7E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08315 7f3c86781b8eeb5bcdf6e4920666bb92 223 SUPERFAMILY SSF52540 3 222 1.63E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08315 7f3c86781b8eeb5bcdf6e4920666bb92 223 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS08315 7f3c86781b8eeb5bcdf6e4920666bb92 223 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 41 54 - T 23-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 SUPERFAMILY SSF50249 189 295 1.71E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 Gene3D G3DSA:2.40.50.140 198 298 2.0E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 PANTHER PTHR10459 54 297 8.0E-36 T 23-04-2016 UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 Gene3D G3DSA:3.30.470.30 60 161 6.7E-4 T 23-04-2016 UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 Pfam PF14743 DNA ligase OB-like domain 228 295 4.1E-26 T 23-04-2016 IPR029319 DNA ligase, OB-like domain UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 SUPERFAMILY SSF56091 49 215 1.47E-34 T 23-04-2016 UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 Gene3D G3DSA:3.30.1490.70 51 59 3.0E-9 T 23-04-2016 UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 Gene3D G3DSA:3.30.1490.70 167 197 3.0E-9 T 23-04-2016 UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 Pfam PF01068 ATP dependent DNA ligase domain 84 214 1.3E-12 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 PANTHER PTHR10459:SF68 54 297 8.0E-36 T 23-04-2016 UPTC3659_RS00255 811f207e564811f7a86c8303a721713b 302 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 191 214 - T 23-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 UPTC3659_RS00605 b22d8d7fd2a771d54f6600a2964fca7f 255 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 254 43.282 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 UPTC3659_RS00605 b22d8d7fd2a771d54f6600a2964fca7f 255 PANTHER PTHR21235 1 255 9.4E-101 T 23-04-2016 UPTC3659_RS00605 b22d8d7fd2a771d54f6600a2964fca7f 255 Pfam PF00977 Histidine biosynthesis protein 5 237 3.0E-74 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 UPTC3659_RS00605 b22d8d7fd2a771d54f6600a2964fca7f 255 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 254 1.9E-100 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 UPTC3659_RS00605 b22d8d7fd2a771d54f6600a2964fca7f 255 PANTHER PTHR21235:SF2 1 255 9.4E-101 T 23-04-2016 UPTC3659_RS00605 b22d8d7fd2a771d54f6600a2964fca7f 255 SUPERFAMILY SSF51366 1 254 1.81E-71 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 UPTC3659_RS00605 b22d8d7fd2a771d54f6600a2964fca7f 255 Gene3D G3DSA:3.20.20.70 4 255 1.5E-82 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS02395 a5cda4cd2ee3925fcfadbd9633c1efa0 492 Pfam PF00474 Sodium:solute symporter family 40 437 2.2E-93 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS02395 a5cda4cd2ee3925fcfadbd9633c1efa0 492 PANTHER PTHR11819:SF148 9 488 6.5E-158 T 23-04-2016 UPTC3659_RS02395 a5cda4cd2ee3925fcfadbd9633c1efa0 492 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 40 437 1.9E-89 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS02395 a5cda4cd2ee3925fcfadbd9633c1efa0 492 PANTHER PTHR11819 9 488 6.5E-158 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS02395 a5cda4cd2ee3925fcfadbd9633c1efa0 492 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 11 488 7.9E-194 T 23-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 UPTC3659_RS04450 7c5f19119227b31fc41aa121ec76a2fc 87 Pfam PF09442 Domain of unknown function (DUF2018) 8 85 1.2E-16 T 23-04-2016 IPR018563 Protein of unknown function DUF2018 UPTC3659_RS04450 7c5f19119227b31fc41aa121ec76a2fc 87 Gene3D G3DSA:1.10.3350.10 5 85 3.7E-8 T 23-04-2016 IPR023126 HP0242-like domain UPTC3659_RS04450 7c5f19119227b31fc41aa121ec76a2fc 87 SUPERFAMILY SSF158752 1 85 1.83E-24 T 23-04-2016 UPTC3659_RS01670 6432ba37bfe68e77b6eeba22948de29b 661 Pfam PF05159 Capsule polysaccharide biosynthesis protein 23 275 9.5E-42 T 23-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 UPTC3659_RS01670 6432ba37bfe68e77b6eeba22948de29b 661 Pfam PF05159 Capsule polysaccharide biosynthesis protein 363 606 3.5E-39 T 23-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 UPTC3659_RS04505 93b9bca026cb3d9105cc2502e933fe5b 201 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 158 174 7.8E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UPTC3659_RS04505 93b9bca026cb3d9105cc2502e933fe5b 201 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 174 189 7.8E-6 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UPTC3659_RS04505 93b9bca026cb3d9105cc2502e933fe5b 201 Gene3D G3DSA:1.10.10.10 149 199 1.1E-12 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS04505 93b9bca026cb3d9105cc2502e933fe5b 201 SUPERFAMILY SSF51206 9 138 5.89E-18 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like UPTC3659_RS04505 93b9bca026cb3d9105cc2502e933fe5b 201 PANTHER PTHR24567 43 199 1.2E-20 T 23-04-2016 UPTC3659_RS04505 93b9bca026cb3d9105cc2502e933fe5b 201 Pfam PF13545 Crp-like helix-turn-helix domain 144 198 1.6E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UPTC3659_RS04505 93b9bca026cb3d9105cc2502e933fe5b 201 SMART SM00419 152 200 4.9E-10 T 23-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UPTC3659_RS04505 93b9bca026cb3d9105cc2502e933fe5b 201 SUPERFAMILY SSF46785 142 199 6.11E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS04505 93b9bca026cb3d9105cc2502e933fe5b 201 Gene3D G3DSA:2.60.120.10 23 138 5.8E-16 T 23-04-2016 IPR014710 RmlC-like jelly roll fold UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 2.2E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 2.2E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 2.2E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 2.2E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PRINTS PR00173 Glutamate-aspartate symporter signature 204 223 2.2E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 2.2E-25 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 Gene3D G3DSA:1.10.3860.10 13 435 3.0E-96 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PANTHER PTHR11958 12 379 1.5E-145 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PANTHER PTHR11958:SF49 12 379 1.5E-145 T 23-04-2016 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 Pfam PF00375 Sodium:dicarboxylate symporter family 16 429 9.0E-93 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PANTHER PTHR11958 397 445 1.5E-145 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 PANTHER PTHR11958:SF49 397 445 1.5E-145 T 23-04-2016 UPTC3659_RS06985 ad380076fb8fdd48e3e0d8c1b419f3d6 455 SUPERFAMILY SSF118215 16 430 4.58E-90 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS07325 7830978cad0aa6f36610c3f6d9f4ed3c 789 SUPERFAMILY SSF53649 227 537 5.67E-28 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 UPTC3659_RS07325 7830978cad0aa6f36610c3f6d9f4ed3c 789 PANTHER PTHR30443 2 572 2.6E-64 T 23-04-2016 UPTC3659_RS07325 7830978cad0aa6f36610c3f6d9f4ed3c 789 Pfam PF00884 Sulfatase 227 523 7.3E-37 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 UPTC3659_RS07325 7830978cad0aa6f36610c3f6d9f4ed3c 789 Gene3D G3DSA:3.40.720.10 227 529 2.1E-18 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 425 32.103 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 PANTHER PTHR22572 4 422 9.2E-136 T 23-04-2016 UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 SUPERFAMILY SSF51161 249 410 1.89E-31 T 23-04-2016 IPR011004 Trimeric LpxA-like UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 Gene3D G3DSA:2.160.10.10 250 409 1.1E-30 T 23-04-2016 UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 SUPERFAMILY SSF53448 1 246 9.39E-50 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 PANTHER PTHR22572:SF115 4 422 9.2E-136 T 23-04-2016 UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 Gene3D G3DSA:3.90.550.10 1 244 1.8E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 426 3.5E-147 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 Pfam PF12804 MobA-like NTP transferase domain 5 128 3.7E-14 T 23-04-2016 IPR025877 MobA-like NTP transferase UPTC3659_RS05995 b50b100e1babf815c871872dff6c6863 430 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 368 401 2.1E-6 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 Pfam PF13183 4Fe-4S dicluster domain 147 221 3.3E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 Gene3D G3DSA:1.10.1060.10 112 238 3.2E-27 T 23-04-2016 UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 Gene3D G3DSA:3.10.20.30 3 105 9.4E-32 T 23-04-2016 IPR012675 Beta-grasp domain UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 SUPERFAMILY SSF46548 109 237 5.93E-25 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 PANTHER PTHR11921:SF13 3 241 1.6E-74 T 23-04-2016 UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 6 111 3.4E-30 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 SUPERFAMILY SSF54292 2 105 1.48E-24 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 PANTHER PTHR11921 3 241 1.6E-74 T 23-04-2016 UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 57 65 - T 23-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 UPTC3659_RS01760 2c49948f5b7a23f4ab1971d7031a3e84 241 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 12 230 1.2E-49 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 UPTC3659_RS08230 77f79e1323f9b0967bd69f8a76f51c6a 291 PANTHER PTHR11048 6 291 5.1E-47 T 23-04-2016 UPTC3659_RS08230 77f79e1323f9b0967bd69f8a76f51c6a 291 PANTHER PTHR11048:SF7 6 291 5.1E-47 T 23-04-2016 UPTC3659_RS08230 77f79e1323f9b0967bd69f8a76f51c6a 291 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 7 290 8.0E-109 T 23-04-2016 IPR006371 4-hydroxybenzoate polyprenyltransferase-related UPTC3659_RS08230 77f79e1323f9b0967bd69f8a76f51c6a 291 Pfam PF01040 UbiA prenyltransferase family 32 274 1.4E-41 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 5.5E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 5.5E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 5.5E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 5.5E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 5.5E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 Gene3D G3DSA:3.90.226.10 20 278 4.4E-73 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 PANTHER PTHR22855:SF17 1 279 1.7E-137 T 23-04-2016 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 PANTHER PTHR22855 1 279 1.7E-137 T 23-04-2016 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 276 7.7E-125 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 Pfam PF01039 Carboxyl transferase domain 57 238 1.2E-21 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 SUPERFAMILY SSF52096 24 277 3.14E-83 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS01150 b7763f4d4c0e371d2fd6b0ee52fe9bd4 280 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 38.318 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS06235 ef6b2b56e49997165bebefd52d0f2d3f 64 SUPERFAMILY SSF143800 1 61 1.08E-26 T 23-04-2016 UPTC3659_RS06235 ef6b2b56e49997165bebefd52d0f2d3f 64 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 20.704 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06235 ef6b2b56e49997165bebefd52d0f2d3f 64 Gene3D G3DSA:2.30.170.40 2 61 5.0E-26 T 23-04-2016 UPTC3659_RS06235 ef6b2b56e49997165bebefd52d0f2d3f 64 Pfam PF00830 Ribosomal L28 family 3 60 4.6E-25 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 UPTC3659_RS06235 ef6b2b56e49997165bebefd52d0f2d3f 64 PANTHER PTHR13528 1 60 5.2E-18 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 UPTC3659_RS06235 ef6b2b56e49997165bebefd52d0f2d3f 64 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 5.8E-26 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00810 f73a579adb3da58c012cfb802a23ef1f 157 PANTHER PTHR22960 3 157 3.6E-84 T 23-04-2016 UPTC3659_RS00810 f73a579adb3da58c012cfb802a23ef1f 157 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 3 151 2.0E-55 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 UPTC3659_RS00810 f73a579adb3da58c012cfb802a23ef1f 157 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 1 157 33.579 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 UPTC3659_RS00810 f73a579adb3da58c012cfb802a23ef1f 157 SUPERFAMILY SSF55040 11 154 2.22E-56 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 UPTC3659_RS00810 f73a579adb3da58c012cfb802a23ef1f 157 Gene3D G3DSA:3.30.70.640 2 156 2.4E-64 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 UPTC3659_RS00810 f73a579adb3da58c012cfb802a23ef1f 157 Pfam PF01967 MoaC family 14 149 3.9E-51 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 UPTC3659_RS06495 00e4c8ad839742a7091643617af20719 63 Gene3D G3DSA:3.30.70.100 4 60 8.0E-8 T 23-04-2016 UPTC3659_RS06495 00e4c8ad839742a7091643617af20719 63 Pfam PF00403 Heavy-metal-associated domain 6 59 2.9E-5 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UPTC3659_RS06495 00e4c8ad839742a7091643617af20719 63 SUPERFAMILY SSF55008 3 60 1.23E-7 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UPTC3659_RS06360 710309d870b0f6e1cc8e3d2866be208e 573 Pfam PF01432 Peptidase family M3 183 554 1.3E-46 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 UPTC3659_RS06360 710309d870b0f6e1cc8e3d2866be208e 573 Pfam PF08439 Oligopeptidase F 101 167 9.5E-14 T 23-04-2016 IPR013647 Oligopeptidase F, N-terminal domain UPTC3659_RS06360 710309d870b0f6e1cc8e3d2866be208e 573 Gene3D G3DSA:3.40.390.10 325 401 4.4E-4 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 UPTC3659_RS06360 710309d870b0f6e1cc8e3d2866be208e 573 PANTHER PTHR11804 250 570 9.2E-45 T 23-04-2016 UPTC3659_RS06360 710309d870b0f6e1cc8e3d2866be208e 573 SUPERFAMILY SSF55486 42 570 1.22E-94 T 23-04-2016 UPTC3659_RS01455 617425ea5746cb9a6e9533f34d3b9075 212 Pfam PF13309 HTH domain 161 208 3.1E-16 T 23-04-2016 UPTC3659_RS01455 617425ea5746cb9a6e9533f34d3b9075 212 Pfam PF08348 YheO-like PAS domain 8 117 1.4E-31 T 23-04-2016 IPR013559 YheO-like UPTC3659_RS01455 617425ea5746cb9a6e9533f34d3b9075 212 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 1 123 9.0E-65 T 23-04-2016 IPR013559 YheO-like UPTC3659_RS01455 617425ea5746cb9a6e9533f34d3b9075 212 PANTHER PTHR35568 9 212 5.7E-34 T 23-04-2016 UPTC3659_RS01455 617425ea5746cb9a6e9533f34d3b9075 212 PANTHER PTHR35568:SF1 9 212 5.7E-34 T 23-04-2016 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 SUPERFAMILY SSF54752 269 326 7.72E-21 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 PANTHER PTHR22942:SF1 3 336 1.7E-190 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 Hamap MF_00268 Protein RecA [recA]. 5 330 51.418 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 SUPERFAMILY SSF52540 4 268 6.68E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 PANTHER PTHR22942 3 336 1.7E-190 T 23-04-2016 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 Pfam PF00154 recA bacterial DNA recombination protein 7 269 2.3E-140 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 SMART SM00382 57 229 7.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.9E-171 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 Gene3D G3DSA:3.40.50.300 29 268 3.3E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 PRINTS PR00142 RecA protein signature 165 194 1.5E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 PRINTS PR00142 RecA protein signature 127 156 1.5E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 PRINTS PR00142 RecA protein signature 93 122 1.5E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 PRINTS PR00142 RecA protein signature 244 273 1.5E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 PRINTS PR00142 RecA protein signature 211 239 1.5E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 PRINTS PR00142 RecA protein signature 298 315 1.5E-85 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 Gene3D G3DSA:3.30.250.10 269 327 1.1E-27 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal UPTC3659_RS00850 f67396de428f093627a0754ebfdfd88d 345 ProSitePatterns PS00321 recA signature. 214 222 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 UPTC3659_RS06065 2384be20fddca875c13346afad8ab79a 174 SUPERFAMILY SSF50346 96 165 2.28E-12 T 23-04-2016 IPR011033 PRC-barrel-like UPTC3659_RS06065 2384be20fddca875c13346afad8ab79a 174 Pfam PF01782 RimM N-terminal domain 7 80 2.3E-8 T 23-04-2016 IPR002676 RimM protein GO:0006364 UPTC3659_RS06065 2384be20fddca875c13346afad8ab79a 174 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 6 166 1.7E-33 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 UPTC3659_RS06065 2384be20fddca875c13346afad8ab79a 174 PANTHER PTHR33692 1 173 9.2E-22 T 23-04-2016 UPTC3659_RS06065 2384be20fddca875c13346afad8ab79a 174 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 170 18.647 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 UPTC3659_RS06065 2384be20fddca875c13346afad8ab79a 174 Gene3D G3DSA:2.30.30.240 96 163 9.2E-15 T 23-04-2016 UPTC3659_RS06065 2384be20fddca875c13346afad8ab79a 174 SUPERFAMILY SSF50447 4 81 9.18E-7 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS06065 2384be20fddca875c13346afad8ab79a 174 Pfam PF05239 PRC-barrel domain 94 165 7.1E-8 T 23-04-2016 IPR027275 PRC-barrel domain UPTC3659_RS06065 2384be20fddca875c13346afad8ab79a 174 Gene3D G3DSA:2.40.30.60 2 79 2.4E-4 T 23-04-2016 IPR002676 RimM protein GO:0006364 UPTC3659_RS03740 759b2689ab9f10968afe1d7d00d9a218 504 PANTHER PTHR11059 2 504 7.3E-44 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 UPTC3659_RS03740 759b2689ab9f10968afe1d7d00d9a218 504 Gene3D G3DSA:3.40.50.300 1 164 1.8E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03740 759b2689ab9f10968afe1d7d00d9a218 504 Gene3D G3DSA:3.40.50.300 373 488 1.8E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03740 759b2689ab9f10968afe1d7d00d9a218 504 Gene3D G3DSA:3.40.50.300 309 325 1.8E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03740 759b2689ab9f10968afe1d7d00d9a218 504 PIRSF PIRSF003128 1 504 4.3E-109 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 UPTC3659_RS03740 759b2689ab9f10968afe1d7d00d9a218 504 SUPERFAMILY SSF52540 278 468 5.33E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03740 759b2689ab9f10968afe1d7d00d9a218 504 SUPERFAMILY SSF52540 1 187 5.33E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03740 759b2689ab9f10968afe1d7d00d9a218 504 Pfam PF13476 AAA domain 12 178 1.3E-7 T 23-04-2016 UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 Gene3D G3DSA:1.10.287.110 195 254 3.5E-15 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 SMART SM00271 187 252 1.9E-12 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 SUPERFAMILY SSF158682 55 200 1.7E-19 T 23-04-2016 IPR029024 TerB-like UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 Pfam PF00226 DnaJ domain 191 254 3.4E-14 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 SUPERFAMILY SSF46565 184 254 6.28E-17 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 Pfam PF05099 Tellurite resistance protein TerB 45 167 5.0E-16 T 23-04-2016 IPR007791 Co-chaperone DjlA, N-terminal UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 PRINTS PR00625 DnaJ domain signature 208 223 6.7E-11 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 PRINTS PR00625 DnaJ domain signature 190 208 6.7E-11 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 PRINTS PR00625 DnaJ domain signature 232 252 6.7E-11 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS02905 9acf9d22f1d8d6f09569977b88447e22 256 Gene3D G3DSA:1.10.3680.10 57 194 9.7E-19 T 23-04-2016 IPR029024 TerB-like UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 PANTHER PTHR11552 5 563 6.3E-78 T 23-04-2016 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 Pfam PF00732 GMC oxidoreductase 141 320 2.8E-10 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 Pfam PF05199 GMC oxidoreductase 430 557 2.5E-18 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 SUPERFAMILY SSF51905 506 567 6.22E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 SUPERFAMILY SSF51905 7 329 6.22E-53 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 Gene3D G3DSA:3.50.50.60 7 154 4.7E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 Gene3D G3DSA:3.50.50.60 497 564 4.7E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 Gene3D G3DSA:3.50.50.60 232 337 4.7E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 Gene3D G3DSA:3.50.50.60 440 453 4.7E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 PANTHER PTHR11552:SF139 5 563 6.3E-78 T 23-04-2016 UPTC3659_RS01785 1d47a82e4a5aff03f04771671a1ef41a 573 SUPERFAMILY SSF54373 403 479 5.89E-9 T 23-04-2016 UPTC3659_RS01240 6395a44dffe2171c3d585ca554fc1acf 157 Gene3D G3DSA:3.30.70.560 29 153 2.9E-32 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 UPTC3659_RS01240 6395a44dffe2171c3d585ca554fc1acf 157 PANTHER PTHR20941 3 153 8.3E-26 T 23-04-2016 UPTC3659_RS01240 6395a44dffe2171c3d585ca554fc1acf 157 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 113 124 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 UPTC3659_RS01240 6395a44dffe2171c3d585ca554fc1acf 157 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 30 153 2.4E-20 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 UPTC3659_RS01240 6395a44dffe2171c3d585ca554fc1acf 157 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 29 154 1.4E-33 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 UPTC3659_RS01240 6395a44dffe2171c3d585ca554fc1acf 157 SUPERFAMILY SSF55083 28 153 1.7E-33 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 4 348 40.783 T 23-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 279 6.7E-60 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 SUPERFAMILY SSF51735 2 191 7.34E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 SUPERFAMILY SSF51735 225 350 7.34E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 Gene3D G3DSA:3.40.50.720 5 238 1.5E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 Gene3D G3DSA:3.90.25.10 239 348 4.9E-14 T 23-04-2016 UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 PANTHER PTHR10366:SF259 6 191 6.2E-89 T 23-04-2016 UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 PANTHER PTHR10366:SF259 226 348 6.2E-89 T 23-04-2016 UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 PANTHER PTHR10366 6 191 6.2E-89 T 23-04-2016 UPTC3659_RS01610 35ba83e21919016b2fd063d2e8ae4655 352 PANTHER PTHR10366 226 348 6.2E-89 T 23-04-2016 UPTC3659_RS02505 9fff80e08a4669b5160dcba305e3eca6 510 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 296 4.0E-121 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 UPTC3659_RS02505 9fff80e08a4669b5160dcba305e3eca6 510 PANTHER PTHR11669 1 425 1.8E-133 T 23-04-2016 UPTC3659_RS02505 9fff80e08a4669b5160dcba305e3eca6 510 Gene3D G3DSA:3.40.50.300 14 165 1.5E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02505 9fff80e08a4669b5160dcba305e3eca6 510 PANTHER PTHR11669:SF0 1 425 1.8E-133 T 23-04-2016 UPTC3659_RS02505 9fff80e08a4669b5160dcba305e3eca6 510 SMART SM00382 36 178 5.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS02505 9fff80e08a4669b5160dcba305e3eca6 510 Gene3D G3DSA:1.10.8.60 166 241 8.3E-31 T 23-04-2016 UPTC3659_RS02505 9fff80e08a4669b5160dcba305e3eca6 510 Pfam PF13177 DNA polymerase III, delta subunit 19 177 1.1E-43 T 23-04-2016 UPTC3659_RS02505 9fff80e08a4669b5160dcba305e3eca6 510 SUPERFAMILY SSF52540 31 227 6.69E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06415 889a83e8b35bfadf051926e9e5defd5b 143 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 12 135 1.4E-24 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 UPTC3659_RS06415 889a83e8b35bfadf051926e9e5defd5b 143 PIRSF PIRSF002889 1 139 1.2E-29 T 23-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 UPTC3659_RS06415 889a83e8b35bfadf051926e9e5defd5b 143 PANTHER PTHR30435:SF12 1 129 9.1E-16 T 23-04-2016 UPTC3659_RS06415 889a83e8b35bfadf051926e9e5defd5b 143 PANTHER PTHR30435 1 129 9.1E-16 T 23-04-2016 UPTC3659_RS07930 db4271bb83463fceebf959b07ef32992 198 SUPERFAMILY SSF56300 138 174 1.52E-12 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like UPTC3659_RS07930 db4271bb83463fceebf959b07ef32992 198 SUPERFAMILY SSF56300 1 83 1.52E-12 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like UPTC3659_RS07930 db4271bb83463fceebf959b07ef32992 198 Pfam PF00149 Calcineurin-like phosphoesterase 2 157 4.6E-4 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 UPTC3659_RS07930 db4271bb83463fceebf959b07ef32992 198 Gene3D G3DSA:3.60.21.10 2 83 2.6E-7 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like UPTC3659_RS07930 db4271bb83463fceebf959b07ef32992 198 Gene3D G3DSA:3.60.21.10 137 171 2.6E-7 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like UPTC3659_RS07915 99889ab7204501eec61eb5a66a7b227a 172 Gene3D G3DSA:2.40.50.180 65 102 9.6E-6 T 23-04-2016 UPTC3659_RS07915 99889ab7204501eec61eb5a66a7b227a 172 Pfam PF01584 CheW-like domain 29 170 4.9E-30 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 UPTC3659_RS07915 99889ab7204501eec61eb5a66a7b227a 172 PANTHER PTHR22617 1 171 1.1E-30 T 23-04-2016 UPTC3659_RS07915 99889ab7204501eec61eb5a66a7b227a 172 PANTHER PTHR22617:SF33 1 171 1.1E-30 T 23-04-2016 UPTC3659_RS07915 99889ab7204501eec61eb5a66a7b227a 172 SMART SM00260 25 168 3.5E-32 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 UPTC3659_RS07915 99889ab7204501eec61eb5a66a7b227a 172 SUPERFAMILY SSF50341 24 170 6.15E-33 T 23-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 UPTC3659_RS06610 1868130359c44f61d7be16ad17e4746c 222 PANTHER PTHR30616 49 222 1.7E-41 T 23-04-2016 UPTC3659_RS06610 1868130359c44f61d7be16ad17e4746c 222 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 42 220 1.6E-43 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase UPTC3659_RS06610 1868130359c44f61d7be16ad17e4746c 222 Gene3D G3DSA:3.60.140.10 45 221 2.5E-47 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase UPTC3659_RS06610 1868130359c44f61d7be16ad17e4746c 222 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 44 218 1.1E-42 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase UPTC3659_RS06610 1868130359c44f61d7be16ad17e4746c 222 SUPERFAMILY SSF64438 44 221 2.93E-50 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic UPTC3659_RS03060 084436c5767dae403ec7fed3e158b8ed 269 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 41 257 4.0E-56 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 UPTC3659_RS03060 084436c5767dae403ec7fed3e158b8ed 269 Pfam PF02666 Phosphatidylserine decarboxylase 51 266 2.8E-45 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 UPTC3659_RS03060 084436c5767dae403ec7fed3e158b8ed 269 PANTHER PTHR10067:SF4 3 260 1.4E-55 T 23-04-2016 UPTC3659_RS03060 084436c5767dae403ec7fed3e158b8ed 269 PANTHER PTHR10067 3 260 1.4E-55 T 23-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 UPTC3659_RS03960 43f4670de4221fe5b33b4dcc9b96ee4a 406 SUPERFAMILY SSF63411 11 200 1.75E-28 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UPTC3659_RS03960 43f4670de4221fe5b33b4dcc9b96ee4a 406 Pfam PF00675 Insulinase (Peptidase family M16) 38 152 2.9E-6 T 23-04-2016 IPR011765 Peptidase M16, N-terminal UPTC3659_RS03960 43f4670de4221fe5b33b4dcc9b96ee4a 406 SUPERFAMILY SSF63411 226 391 6.7E-31 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UPTC3659_RS03960 43f4670de4221fe5b33b4dcc9b96ee4a 406 Gene3D G3DSA:3.30.830.10 34 209 2.5E-23 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 UPTC3659_RS03960 43f4670de4221fe5b33b4dcc9b96ee4a 406 Pfam PF05193 Peptidase M16 inactive domain 161 336 1.1E-19 T 23-04-2016 IPR007863 Peptidase M16, C-terminal UPTC3659_RS03960 43f4670de4221fe5b33b4dcc9b96ee4a 406 Gene3D G3DSA:3.30.830.10 224 391 3.7E-25 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 UPTC3659_RS03960 43f4670de4221fe5b33b4dcc9b96ee4a 406 PANTHER PTHR11851 40 389 5.5E-26 T 23-04-2016 UPTC3659_RS03890 17bfa6ff68e466d098555630926f9533 194 SUPERFAMILY SSF47188 3 126 4.19E-27 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS03890 17bfa6ff68e466d098555630926f9533 194 Pfam PF01814 Hemerythrin HHE cation binding domain 17 120 5.9E-8 T 23-04-2016 IPR012312 Haemerythrin-like UPTC3659_RS03890 17bfa6ff68e466d098555630926f9533 194 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 7 128 2.9E-31 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS03890 17bfa6ff68e466d098555630926f9533 194 Gene3D G3DSA:1.20.120.50 4 128 5.7E-30 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS03890 17bfa6ff68e466d098555630926f9533 194 ProSitePatterns PS00550 Hemerythrin family signature. 59 82 - T 23-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 UPTC3659_RS03890 17bfa6ff68e466d098555630926f9533 194 PANTHER PTHR37164 3 144 1.5E-18 T 23-04-2016 UPTC3659_RS05905 34b19f92b04539475ee3c2149ad19545 457 SUPERFAMILY SSF58104 156 351 1.18E-50 T 23-04-2016 UPTC3659_RS05905 34b19f92b04539475ee3c2149ad19545 457 SUPERFAMILY SSF58104 78 102 1.18E-50 T 23-04-2016 UPTC3659_RS05905 34b19f92b04539475ee3c2149ad19545 457 SMART SM00283 150 366 9.5E-25 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS05905 34b19f92b04539475ee3c2149ad19545 457 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 211 335 3.8E-34 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS05905 34b19f92b04539475ee3c2149ad19545 457 Gene3D G3DSA:1.10.287.950 162 338 5.8E-45 T 23-04-2016 UPTC3659_RS05905 34b19f92b04539475ee3c2149ad19545 457 PANTHER PTHR32089 25 103 2.7E-49 T 23-04-2016 UPTC3659_RS05905 34b19f92b04539475ee3c2149ad19545 457 PANTHER PTHR32089 136 332 2.7E-49 T 23-04-2016 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 SMART SM00562 1 137 1.7E-83 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 3.6E-43 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 3.6E-43 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 3.6E-43 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 3.6E-43 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 3.6E-43 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 Gene3D G3DSA:3.30.70.141 2 136 5.1E-59 T 23-04-2016 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 23-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 PANTHER PTHR11349 1 137 5.0E-70 T 23-04-2016 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 35.814 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 SUPERFAMILY SSF54919 1 136 2.23E-57 T 23-04-2016 UPTC3659_RS07745 60439ca3ed9e2b998e8eec54fb56f4e6 137 Pfam PF00334 Nucleoside diphosphate kinase 2 136 3.0E-56 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UPTC3659_RS08680 b375a9f927debe01314f0c5a6e95a352 326 PANTHER PTHR24220 5 243 1.2E-94 T 23-04-2016 UPTC3659_RS08680 b375a9f927debe01314f0c5a6e95a352 326 Pfam PF00005 ABC transporter 19 163 1.2E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS08680 b375a9f927debe01314f0c5a6e95a352 326 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS08680 b375a9f927debe01314f0c5a6e95a352 326 Gene3D G3DSA:3.40.50.300 3 235 1.1E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08680 b375a9f927debe01314f0c5a6e95a352 326 PANTHER PTHR24220:SF282 5 243 1.2E-94 T 23-04-2016 UPTC3659_RS08680 b375a9f927debe01314f0c5a6e95a352 326 SMART SM00382 28 213 6.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS08680 b375a9f927debe01314f0c5a6e95a352 326 SUPERFAMILY SSF52540 3 239 2.94E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 PANTHER PTHR30580 103 614 5.6E-127 T 23-04-2016 UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 Pfam PF00270 DEAD/DEAH box helicase 114 268 2.3E-13 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 Gene3D G3DSA:3.40.50.300 101 268 2.6E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 SMART SM00490 393 488 4.8E-9 T 23-04-2016 IPR001650 Helicase, C-terminal UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 TIGRFAM TIGR00595 priA: primosomal protein N' 129 604 5.6E-142 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 SUPERFAMILY SSF52540 402 495 9.24E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 SUPERFAMILY SSF52540 123 337 9.24E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 Pfam PF00271 Helicase conserved C-terminal domain 417 488 2.5E-7 T 23-04-2016 IPR001650 Helicase, C-terminal UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 SMART SM00487 107 291 7.5E-20 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 Gene3D G3DSA:3.40.50.300 308 325 5.1E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 Gene3D G3DSA:3.40.50.300 390 523 5.1E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07080 bd1030c0129ab9186b0bbb194b1620c7 614 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 613 18.12 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 UPTC3659_RS03980 4607d9ce3d13b608bf9b8c8d885bb2d0 219 SUPERFAMILY SSF161098 13 210 2.75E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03980 4607d9ce3d13b608bf9b8c8d885bb2d0 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 202 5.4E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03980 4607d9ce3d13b608bf9b8c8d885bb2d0 219 Gene3D G3DSA:1.10.3720.10 9 218 4.5E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS03980 4607d9ce3d13b608bf9b8c8d885bb2d0 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 107 5.2E-16 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 UPTC3659_RS03980 4607d9ce3d13b608bf9b8c8d885bb2d0 219 PANTHER PTHR30614 13 218 1.6E-46 T 23-04-2016 UPTC3659_RS04355 0e1a207c69f4c2d38953123e75a2148c 82 SUPERFAMILY SSF55174 1 77 8.24E-18 T 23-04-2016 UPTC3659_RS04355 0e1a207c69f4c2d38953123e75a2148c 82 PIRSF PIRSF038881 1 82 1.7E-20 T 23-04-2016 IPR025490 RNA-binding protein, HP1423 type UPTC3659_RS04355 0e1a207c69f4c2d38953123e75a2148c 82 SMART SM00363 1 56 1.5E-5 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS04355 0e1a207c69f4c2d38953123e75a2148c 82 Gene3D G3DSA:3.10.290.10 1 77 6.3E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS04355 0e1a207c69f4c2d38953123e75a2148c 82 Pfam PF01479 S4 domain 1 47 3.7E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 Gene3D G3DSA:2.40.40.20 564 575 2.5E-41 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 Gene3D G3DSA:2.40.40.20 441 471 2.5E-41 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 Gene3D G3DSA:2.40.40.20 609 748 2.5E-41 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 Pfam PF01568 Molydopterin dinucleotide binding domain 627 739 4.7E-12 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 PANTHER PTHR11615:SF140 193 399 9.3E-100 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 PANTHER PTHR11615:SF140 527 748 9.3E-100 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 PANTHER PTHR11615:SF140 1 174 9.3E-100 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 SUPERFAMILY SSF50692 610 748 1.67E-28 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 SUPERFAMILY SSF50692 552 578 1.67E-28 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 Gene3D G3DSA:3.40.228.10 19 200 2.1E-68 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 SUPERFAMILY SSF53706 1 463 9.03E-125 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 Gene3D G3DSA:3.40.50.740 234 370 1.4E-34 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 Gene3D G3DSA:3.40.50.740 1 18 1.4E-34 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 Pfam PF00384 Molybdopterin oxidoreductase 10 355 1.5E-42 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 PANTHER PTHR11615 193 399 9.3E-100 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 PANTHER PTHR11615 527 748 9.3E-100 T 23-04-2016 UPTC3659_RS01880 8372bad03c8a8011e0e4cbde4926c935 748 PANTHER PTHR11615 1 174 9.3E-100 T 23-04-2016 UPTC3659_RS01415 a8c987601ad74c72038d3dc0adf247c0 345 PANTHER PTHR30106:SF2 15 344 8.3E-85 T 23-04-2016 UPTC3659_RS01415 a8c987601ad74c72038d3dc0adf247c0 345 PANTHER PTHR30106 15 344 8.3E-85 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 UPTC3659_RS01415 a8c987601ad74c72038d3dc0adf247c0 345 Pfam PF03601 Conserved hypothetical protein 698 14 325 5.8E-76 T 23-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 UPTC3659_RS01415 a8c987601ad74c72038d3dc0adf247c0 345 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 16 341 4.9E-73 T 23-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 UPTC3659_RS00990 1d06bd5fce8538c23577310f1363ea73 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 6.5E-33 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 UPTC3659_RS00990 1d06bd5fce8538c23577310f1363ea73 102 PANTHER PTHR21349 1 101 8.9E-27 T 23-04-2016 UPTC3659_RS00990 1d06bd5fce8538c23577310f1363ea73 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 4.5E-34 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00990 1d06bd5fce8538c23577310f1363ea73 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 23.546 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00990 1d06bd5fce8538c23577310f1363ea73 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 23-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00990 1d06bd5fce8538c23577310f1363ea73 102 SUPERFAMILY SSF141091 1 100 1.57E-30 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 UPTC3659_RS03535 4240bed5f778923ce2f240ac6f67d89c 218 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS03535 4240bed5f778923ce2f240ac6f67d89c 218 Gene3D G3DSA:3.40.50.300 1 215 6.7E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03535 4240bed5f778923ce2f240ac6f67d89c 218 PANTHER PTHR24220 15 216 2.9E-69 T 23-04-2016 UPTC3659_RS03535 4240bed5f778923ce2f240ac6f67d89c 218 SMART SM00382 25 215 9.6E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS03535 4240bed5f778923ce2f240ac6f67d89c 218 Pfam PF00005 ABC transporter 17 163 1.7E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS03535 4240bed5f778923ce2f240ac6f67d89c 218 SUPERFAMILY SSF52540 1 216 3.17E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03535 4240bed5f778923ce2f240ac6f67d89c 218 PANTHER PTHR24220:SF470 15 216 2.9E-69 T 23-04-2016 UPTC3659_RS03240 e5eaa98a0ddede03f980ae91d14426f2 286 Gene3D G3DSA:3.90.320.10 3 190 1.7E-38 T 23-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 UPTC3659_RS03240 e5eaa98a0ddede03f980ae91d14426f2 286 SUPERFAMILY SSF52980 3 187 1.34E-38 T 23-04-2016 IPR011335 Restriction endonuclease type II-like UPTC3659_RS03240 e5eaa98a0ddede03f980ae91d14426f2 286 TIGRFAM TIGR03033 phage_rel_nuc: putative phage-type endonuclease 8 155 3.7E-23 T 23-04-2016 IPR017482 Putative phage-type endonuclease UPTC3659_RS03240 e5eaa98a0ddede03f980ae91d14426f2 286 Pfam PF09588 YqaJ-like viral recombinase domain 14 144 1.2E-9 T 23-04-2016 IPR019080 YqaJ viral recombinase UPTC3659_RS00600 f18e7098e3b6c0f3cb3c13ff350f8b91 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 240 31.666 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 UPTC3659_RS00600 f18e7098e3b6c0f3cb3c13ff350f8b91 244 SUPERFAMILY SSF51366 4 242 3.63E-58 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 UPTC3659_RS00600 f18e7098e3b6c0f3cb3c13ff350f8b91 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 237 5.8E-69 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 UPTC3659_RS00600 f18e7098e3b6c0f3cb3c13ff350f8b91 244 Pfam PF00977 Histidine biosynthesis protein 4 232 3.2E-68 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 UPTC3659_RS00600 f18e7098e3b6c0f3cb3c13ff350f8b91 244 PANTHER PTHR21235 1 243 1.5E-87 T 23-04-2016 UPTC3659_RS00600 f18e7098e3b6c0f3cb3c13ff350f8b91 244 PANTHER PTHR21235:SF15 1 243 1.5E-87 T 23-04-2016 UPTC3659_RS00600 f18e7098e3b6c0f3cb3c13ff350f8b91 244 Gene3D G3DSA:3.20.20.70 4 242 1.1E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS06665 34f58d13b879c83f82438fb875c8e4a3 298 PANTHER PTHR11795:SF371 1 290 3.4E-106 T 23-04-2016 UPTC3659_RS06665 34f58d13b879c83f82438fb875c8e4a3 298 PANTHER PTHR11795 1 290 3.4E-106 T 23-04-2016 UPTC3659_RS06665 34f58d13b879c83f82438fb875c8e4a3 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 281 6.2E-44 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS04535 29ac20958bc026ea4fcdc8352c2ac9af 93 SUPERFAMILY SSF159127 1 78 5.36E-25 T 23-04-2016 UPTC3659_RS04535 29ac20958bc026ea4fcdc8352c2ac9af 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 40 56 3.22E-15 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC UPTC3659_RS04535 29ac20958bc026ea4fcdc8352c2ac9af 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 3.22E-15 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC UPTC3659_RS04535 29ac20958bc026ea4fcdc8352c2ac9af 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 58 70 3.22E-15 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC UPTC3659_RS04535 29ac20958bc026ea4fcdc8352c2ac9af 93 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 3.22E-15 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC UPTC3659_RS04535 29ac20958bc026ea4fcdc8352c2ac9af 93 PANTHER PTHR35177:SF2 1 90 8.2E-28 T 23-04-2016 UPTC3659_RS04535 29ac20958bc026ea4fcdc8352c2ac9af 93 PANTHER PTHR35177 1 90 8.2E-28 T 23-04-2016 UPTC3659_RS04535 29ac20958bc026ea4fcdc8352c2ac9af 93 Pfam PF01455 HupF/HypC family 1 66 4.3E-26 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC UPTC3659_RS04535 29ac20958bc026ea4fcdc8352c2ac9af 93 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 78 2.7E-25 T 23-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC UPTC3659_RS07370 557be5fad91bc215fbe5f2125d1a822f 339 PANTHER PTHR30160 1 287 2.9E-39 T 23-04-2016 UPTC3659_RS07370 557be5fad91bc215fbe5f2125d1a822f 339 Gene3D G3DSA:3.40.50.2000 166 338 7.7E-31 T 23-04-2016 UPTC3659_RS07370 557be5fad91bc215fbe5f2125d1a822f 339 SUPERFAMILY SSF53756 1 338 1.1E-70 T 23-04-2016 UPTC3659_RS07370 557be5fad91bc215fbe5f2125d1a822f 339 PANTHER PTHR30160:SF8 1 287 2.9E-39 T 23-04-2016 UPTC3659_RS07370 557be5fad91bc215fbe5f2125d1a822f 339 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 332 6.0E-72 T 23-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 UPTC3659_RS07370 557be5fad91bc215fbe5f2125d1a822f 339 Gene3D G3DSA:3.40.50.2000 1 140 5.9E-30 T 23-04-2016 UPTC3659_RS07370 557be5fad91bc215fbe5f2125d1a822f 339 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 75 298 7.8E-40 T 23-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 PANTHER PTHR32294 319 1105 0.0 T 23-04-2016 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 PANTHER PTHR32294 1 300 0.0 T 23-04-2016 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 PANTHER PTHR32294:SF0 319 1105 0.0 T 23-04-2016 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 PANTHER PTHR32294:SF0 1 300 0.0 T 23-04-2016 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 SMART SM00481 5 72 8.4E-30 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 Gene3D G3DSA:3.20.20.140 4 268 5.9E-46 T 23-04-2016 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 Gene3D G3DSA:1.10.150.280 851 909 5.1E-4 T 23-04-2016 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 324 753 1.2E-175 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 1051 0.0 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 Pfam PF14579 Helix-hairpin-helix motif 827 917 4.8E-21 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 SUPERFAMILY SSF89550 4 275 4.71E-35 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 UPTC3659_RS05530 1ac00c25f3ef6387eb9ebd77af4a5c24 1197 Pfam PF02811 PHP domain 6 185 7.2E-50 T 23-04-2016 IPR004013 PHP domain GO:0003824 UPTC3659_RS02895 a1a35e6263ff6e3c5794dc8c7cb1eb79 530 SUPERFAMILY SSF58104 221 529 1.44E-48 T 23-04-2016 UPTC3659_RS02895 a1a35e6263ff6e3c5794dc8c7cb1eb79 530 Pfam PF00672 HAMP domain 179 249 2.9E-6 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 UPTC3659_RS02895 a1a35e6263ff6e3c5794dc8c7cb1eb79 530 SMART SM00304 199 253 1.5E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 UPTC3659_RS02895 a1a35e6263ff6e3c5794dc8c7cb1eb79 530 SMART SM00283 261 522 2.5E-9 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS02895 a1a35e6263ff6e3c5794dc8c7cb1eb79 530 Gene3D G3DSA:1.10.287.950 286 492 2.7E-35 T 23-04-2016 UPTC3659_RS02895 a1a35e6263ff6e3c5794dc8c7cb1eb79 530 PANTHER PTHR32089 153 530 7.8E-48 T 23-04-2016 UPTC3659_RS02895 a1a35e6263ff6e3c5794dc8c7cb1eb79 530 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 521 6.8E-26 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 4 407 33.58 T 23-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 Gene3D G3DSA:1.10.3860.10 9 401 1.9E-79 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 SUPERFAMILY SSF118215 16 401 9.15E-90 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 PANTHER PTHR11958 13 398 3.2E-167 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 PANTHER PTHR11958:SF68 13 398 3.2E-167 T 23-04-2016 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 PRINTS PR00173 Glutamate-aspartate symporter signature 223 242 2.9E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 2.9E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 2.9E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 PRINTS PR00173 Glutamate-aspartate symporter signature 14 34 2.9E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 2.9E-16 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS06350 e3fce3807f2bd5d96688c8d86bd623a3 408 Pfam PF00375 Sodium:dicarboxylate symporter family 16 399 9.0E-67 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 UPTC3659_RS07710 5571f4754ccc493bbabdbb67fada4aba 145 Pfam PF13302 Acetyltransferase (GNAT) domain 9 132 3.5E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 UPTC3659_RS07710 5571f4754ccc493bbabdbb67fada4aba 145 Gene3D G3DSA:3.40.630.30 10 134 2.7E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS07710 5571f4754ccc493bbabdbb67fada4aba 145 SUPERFAMILY SSF55729 9 136 3.85E-19 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS07710 5571f4754ccc493bbabdbb67fada4aba 145 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 5 137 6.3E-42 T 23-04-2016 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase UPTC3659_RS03460 69275ae04f19a735e4d0bb5da7efc8a0 155 Gene3D G3DSA:3.40.1280.10 1 150 2.1E-53 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UPTC3659_RS03460 69275ae04f19a735e4d0bb5da7efc8a0 155 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 29.94 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 UPTC3659_RS03460 69275ae04f19a735e4d0bb5da7efc8a0 155 PANTHER PTHR12029:SF31 1 147 6.1E-61 T 23-04-2016 UPTC3659_RS03460 69275ae04f19a735e4d0bb5da7efc8a0 155 PIRSF PIRSF029256 1 153 7.7E-58 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 UPTC3659_RS03460 69275ae04f19a735e4d0bb5da7efc8a0 155 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.5E-31 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 UPTC3659_RS03460 69275ae04f19a735e4d0bb5da7efc8a0 155 SUPERFAMILY SSF75217 2 149 2.88E-37 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases UPTC3659_RS03460 69275ae04f19a735e4d0bb5da7efc8a0 155 PANTHER PTHR12029 1 147 6.1E-61 T 23-04-2016 UPTC3659_RS00475 459ca8baa34d217daee360e882d0d9ab 130 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 129 2.5E-38 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS00475 459ca8baa34d217daee360e882d0d9ab 130 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 25 125 5.0E-18 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P UPTC3659_RS00475 459ca8baa34d217daee360e882d0d9ab 130 Gene3D G3DSA:3.100.10.10 29 106 8.2E-12 T 23-04-2016 UPTC3659_RS00475 459ca8baa34d217daee360e882d0d9ab 130 SUPERFAMILY SSF52080 2 127 3.66E-30 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P UPTC3659_RS00475 459ca8baa34d217daee360e882d0d9ab 130 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 1 130 12.604 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS00475 459ca8baa34d217daee360e882d0d9ab 130 PANTHER PTHR12934 2 119 9.6E-33 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS03760 a5d42e933945eb66d5dfdd005f257294 279 PANTHER PTHR34183:SF2 62 178 7.3E-52 T 23-04-2016 UPTC3659_RS03760 a5d42e933945eb66d5dfdd005f257294 279 Pfam PF05036 Sporulation related domain 207 267 9.4E-10 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 UPTC3659_RS03760 a5d42e933945eb66d5dfdd005f257294 279 Gene3D G3DSA:3.30.70.1070 207 263 1.2E-7 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 UPTC3659_RS03760 a5d42e933945eb66d5dfdd005f257294 279 SUPERFAMILY SSF110997 207 267 3.66E-9 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 UPTC3659_RS03760 a5d42e933945eb66d5dfdd005f257294 279 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 85 223 2.3E-53 T 23-04-2016 IPR012997 Rare lipoprotein A UPTC3659_RS03760 a5d42e933945eb66d5dfdd005f257294 279 PANTHER PTHR34183 62 178 7.3E-52 T 23-04-2016 UPTC3659_RS03760 a5d42e933945eb66d5dfdd005f257294 279 SUPERFAMILY SSF50685 86 172 9.42E-10 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain UPTC3659_RS03760 a5d42e933945eb66d5dfdd005f257294 279 Pfam PF03330 Lytic transglycolase 82 171 8.3E-26 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain UPTC3659_RS03760 a5d42e933945eb66d5dfdd005f257294 279 Gene3D G3DSA:2.40.40.10 122 174 5.4E-5 T 23-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain UPTC3659_RS01875 cff8157d8980b473455c21429d36dccd 175 Gene3D G3DSA:3.40.50.740 103 171 5.8E-25 T 23-04-2016 UPTC3659_RS01875 cff8157d8980b473455c21429d36dccd 175 Pfam PF00384 Molybdopterin oxidoreductase 101 170 3.6E-14 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 UPTC3659_RS01875 cff8157d8980b473455c21429d36dccd 175 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 45 89 1.5E-11 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 UPTC3659_RS01875 cff8157d8980b473455c21429d36dccd 175 Gene3D G3DSA:2.20.25.90 43 102 9.6E-17 T 23-04-2016 UPTC3659_RS01875 cff8157d8980b473455c21429d36dccd 175 SMART SM00926 44 98 4.0E-13 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 UPTC3659_RS01875 cff8157d8980b473455c21429d36dccd 175 PANTHER PTHR11615:SF140 46 175 3.2E-60 T 23-04-2016 UPTC3659_RS01875 cff8157d8980b473455c21429d36dccd 175 PANTHER PTHR11615 46 175 3.2E-60 T 23-04-2016 UPTC3659_RS01875 cff8157d8980b473455c21429d36dccd 175 SUPERFAMILY SSF53706 39 174 1.7E-49 T 23-04-2016 UPTC3659_RS08175 718ffc28725424b4e7c67bbf46fc3ea8 226 SUPERFAMILY SSF75217 62 220 1.11E-40 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases UPTC3659_RS08175 718ffc28725424b4e7c67bbf46fc3ea8 226 Gene3D G3DSA:3.30.1330.30 2 68 1.7E-8 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like UPTC3659_RS08175 718ffc28725424b4e7c67bbf46fc3ea8 226 PANTHER PTHR12029 1 220 6.6E-45 T 23-04-2016 UPTC3659_RS08175 718ffc28725424b4e7c67bbf46fc3ea8 226 Gene3D G3DSA:3.40.1280.10 79 222 6.2E-40 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UPTC3659_RS08175 718ffc28725424b4e7c67bbf46fc3ea8 226 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 224 9.1E-51 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 UPTC3659_RS08175 718ffc28725424b4e7c67bbf46fc3ea8 226 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 2 73 7.3E-9 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 UPTC3659_RS08175 718ffc28725424b4e7c67bbf46fc3ea8 226 SUPERFAMILY SSF55315 1 70 2.59E-10 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like UPTC3659_RS08175 718ffc28725424b4e7c67bbf46fc3ea8 226 Pfam PF00588 SpoU rRNA Methylase family 84 220 4.8E-35 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 UPTC3659_RS08175 718ffc28725424b4e7c67bbf46fc3ea8 226 SMART SM00967 2 74 8.7E-9 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 UPTC3659_RS07315 d5dadc640de177444ba3b7599905196b 271 PANTHER PTHR22916 1 261 1.9E-36 T 23-04-2016 UPTC3659_RS07315 d5dadc640de177444ba3b7599905196b 271 Pfam PF00535 Glycosyl transferase family 2 5 157 1.2E-30 T 23-04-2016 IPR001173 Glycosyltransferase 2-like UPTC3659_RS07315 d5dadc640de177444ba3b7599905196b 271 Gene3D G3DSA:3.90.550.10 2 188 1.0E-46 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07315 d5dadc640de177444ba3b7599905196b 271 SUPERFAMILY SSF53448 4 231 3.89E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07315 d5dadc640de177444ba3b7599905196b 271 PANTHER PTHR22916:SF24 1 261 1.9E-36 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 Gene3D G3DSA:1.20.1330.10 649 701 2.0E-20 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 Gene3D G3DSA:1.20.1330.10 55 182 2.0E-20 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 PANTHER PTHR30244 1 180 9.0E-34 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 PANTHER PTHR30244 549 636 9.0E-34 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 PANTHER PTHR30244 657 744 9.0E-34 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 SUPERFAMILY SSF64518 1 183 1.44E-40 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 SUPERFAMILY SSF64518 439 509 1.44E-40 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 SUPERFAMILY SSF64518 263 305 1.44E-40 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 Pfam PF00700 Bacterial flagellin C-terminal helical region 663 744 8.2E-9 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 PANTHER PTHR30244:SF5 1 180 9.0E-34 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 PANTHER PTHR30244:SF5 549 636 9.0E-34 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 PANTHER PTHR30244:SF5 657 744 9.0E-34 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 SUPERFAMILY SSF64518 518 744 1.11E-23 T 23-04-2016 UPTC3659_RS04695 5cc443529dd39fb5906f6a125678a350 744 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.7E-17 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS04275 3e25bbd819efebae4a37161936db0bfb 309 Gene3D G3DSA:3.40.50.1980 156 305 5.7E-32 T 23-04-2016 UPTC3659_RS04275 3e25bbd819efebae4a37161936db0bfb 309 PANTHER PTHR30532:SF4 1 307 4.1E-93 T 23-04-2016 UPTC3659_RS04275 3e25bbd819efebae4a37161936db0bfb 309 SUPERFAMILY SSF53807 27 297 3.3E-65 T 23-04-2016 UPTC3659_RS04275 3e25bbd819efebae4a37161936db0bfb 309 PANTHER PTHR30532 1 307 4.1E-93 T 23-04-2016 UPTC3659_RS04275 3e25bbd819efebae4a37161936db0bfb 309 Pfam PF01497 Periplasmic binding protein 49 281 3.3E-36 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 UPTC3659_RS04275 3e25bbd819efebae4a37161936db0bfb 309 Gene3D G3DSA:3.40.50.1980 32 154 3.7E-29 T 23-04-2016 UPTC3659_RS06150 2999639ce8e57d280dd332f9b5e43a2b 81 Gene3D G3DSA:1.25.40.10 7 44 4.6E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS03320 1e6a53abeeab52129c4042588eefd3ed 133 Pfam PF16677 DNA-packaging protein gp3 15 115 2.6E-17 T 23-04-2016 IPR032066 DNA-packaging protein gp3 UPTC3659_RS01910 68889eaa56a466c99c030446b53fc84c 493 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 436 1.1E-98 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS01910 68889eaa56a466c99c030446b53fc84c 493 PANTHER PTHR11819 7 476 3.3E-177 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS01910 68889eaa56a466c99c030446b53fc84c 493 PANTHER PTHR11819:SF148 7 476 3.3E-177 T 23-04-2016 UPTC3659_RS01910 68889eaa56a466c99c030446b53fc84c 493 Pfam PF00474 Sodium:solute symporter family 38 436 2.3E-104 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 UPTC3659_RS01910 68889eaa56a466c99c030446b53fc84c 493 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 9 486 7.4E-215 T 23-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 UPTC3659_RS04290 80505b970bbdf852a11892a8befb9830 321 Gene3D G3DSA:1.10.3470.10 8 318 1.3E-70 T 23-04-2016 IPR029022 ABC transporter, BtuC-like UPTC3659_RS04290 80505b970bbdf852a11892a8befb9830 321 PANTHER PTHR30472:SF27 8 321 1.1E-139 T 23-04-2016 UPTC3659_RS04290 80505b970bbdf852a11892a8befb9830 321 Pfam PF01032 FecCD transport family 15 316 2.3E-66 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 UPTC3659_RS04290 80505b970bbdf852a11892a8befb9830 321 SUPERFAMILY SSF81345 4 316 3.79E-66 T 23-04-2016 IPR029022 ABC transporter, BtuC-like UPTC3659_RS04290 80505b970bbdf852a11892a8befb9830 321 PANTHER PTHR30472 8 321 1.1E-139 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 Pfam PF02743 Cache domain 55 276 4.6E-12 T 23-04-2016 IPR033479 Double Cache domain 1 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 Gene3D G3DSA:1.10.287.950 496 687 4.2E-43 T 23-04-2016 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 Gene3D G3DSA:3.30.450.20 86 199 1.8E-4 T 23-04-2016 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 549 682 1.3E-32 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 PANTHER PTHR32089 1 385 2.5E-47 T 23-04-2016 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 PANTHER PTHR32089 484 685 2.5E-47 T 23-04-2016 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 SUPERFAMILY SSF58104 379 405 2.62E-48 T 23-04-2016 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 SUPERFAMILY SSF58104 497 691 2.62E-48 T 23-04-2016 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 Gene3D G3DSA:3.30.450.20 200 324 4.6E-12 T 23-04-2016 UPTC3659_RS08555 b2192d6dcdc8790289e9cec00e695796 694 SMART SM00283 477 693 6.5E-23 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS08310 ff772364228dcbee7dad5c052d318cd7 139 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 45 134 6.3E-23 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 UPTC3659_RS08310 ff772364228dcbee7dad5c052d318cd7 139 PANTHER PTHR11058 1 138 2.3E-20 T 23-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 UPTC3659_RS08310 ff772364228dcbee7dad5c052d318cd7 139 PANTHER PTHR11058:SF5 1 138 2.3E-20 T 23-04-2016 UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 PANTHER PTHR10584:SF159 8 331 1.4E-91 T 23-04-2016 UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 Gene3D G3DSA:3.40.50.620 326 436 3.8E-35 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 SUPERFAMILY SSF53613 10 306 3.74E-51 T 23-04-2016 IPR029056 Ribokinase-like UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 SUPERFAMILY SSF52374 327 453 9.19E-27 T 23-04-2016 UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 Gene3D G3DSA:3.40.1190.20 11 305 1.8E-60 T 23-04-2016 IPR029056 Ribokinase-like UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 324 454 3.7E-58 T 23-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 6 303 1.3E-109 T 23-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 Pfam PF00294 pfkB family carbohydrate kinase 10 295 4.2E-41 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 328 388 7.5E-16 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 Pfam PF01467 Cytidylyltransferase-like 331 421 1.4E-15 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 Hamap MF_01603 Bifunctional protein HldE [hldE]. 3 456 38.734 T 23-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 UPTC3659_RS02540 326bb23dc93ed6b6328b9929920e625b 457 PANTHER PTHR10584 8 331 1.4E-91 T 23-04-2016 UPTC3659_RS00450 a759191be86424b700fa1ad3acc42ab9 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.732 T 23-04-2016 IPR023053 Ribosomal protein S14, type Z UPTC3659_RS00450 a759191be86424b700fa1ad3acc42ab9 61 PANTHER PTHR19836 12 61 7.6E-32 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00450 a759191be86424b700fa1ad3acc42ab9 61 SUPERFAMILY SSF57716 3 61 3.07E-21 T 23-04-2016 UPTC3659_RS00450 a759191be86424b700fa1ad3acc42ab9 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 1.8E-24 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00450 a759191be86424b700fa1ad3acc42ab9 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 23-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00450 a759191be86424b700fa1ad3acc42ab9 61 Gene3D G3DSA:4.10.830.10 1 61 2.4E-27 T 23-04-2016 UPTC3659_RS05220 a4855eff191fc716394ca6abc28cbcd7 821 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 113 507 4.0E-39 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein UPTC3659_RS05220 a4855eff191fc716394ca6abc28cbcd7 821 Pfam PF05954 Phage late control gene D protein (GPD) 52 348 1.3E-17 T 23-04-2016 UPTC3659_RS05220 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69349 571 755 6.75E-21 T 23-04-2016 UPTC3659_RS05220 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69349 489 515 6.75E-21 T 23-04-2016 UPTC3659_RS05220 a4855eff191fc716394ca6abc28cbcd7 821 Gene3D G3DSA:3.55.50.10 129 209 1.7E-15 T 23-04-2016 UPTC3659_RS05220 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69279 8 214 2.21E-24 T 23-04-2016 UPTC3659_RS05220 a4855eff191fc716394ca6abc28cbcd7 821 Gene3D G3DSA:2.40.50.230 419 499 2.5E-19 T 23-04-2016 IPR006531 Gp5 N-terminal UPTC3659_RS05220 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69255 401 499 1.57E-18 T 23-04-2016 UPTC3659_RS05285 a4855eff191fc716394ca6abc28cbcd7 821 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 113 507 4.0E-39 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein UPTC3659_RS05285 a4855eff191fc716394ca6abc28cbcd7 821 Pfam PF05954 Phage late control gene D protein (GPD) 52 348 1.3E-17 T 23-04-2016 UPTC3659_RS05285 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69349 571 755 6.75E-21 T 23-04-2016 UPTC3659_RS05285 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69349 489 515 6.75E-21 T 23-04-2016 UPTC3659_RS05285 a4855eff191fc716394ca6abc28cbcd7 821 Gene3D G3DSA:3.55.50.10 129 209 1.7E-15 T 23-04-2016 UPTC3659_RS05285 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69279 8 214 2.21E-24 T 23-04-2016 UPTC3659_RS05285 a4855eff191fc716394ca6abc28cbcd7 821 Gene3D G3DSA:2.40.50.230 419 499 2.5E-19 T 23-04-2016 IPR006531 Gp5 N-terminal UPTC3659_RS05285 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69255 401 499 1.57E-18 T 23-04-2016 UPTC3659_RS05155 a4855eff191fc716394ca6abc28cbcd7 821 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 113 507 4.0E-39 T 23-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein UPTC3659_RS05155 a4855eff191fc716394ca6abc28cbcd7 821 Pfam PF05954 Phage late control gene D protein (GPD) 52 348 1.3E-17 T 23-04-2016 UPTC3659_RS05155 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69349 571 755 6.75E-21 T 23-04-2016 UPTC3659_RS05155 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69349 489 515 6.75E-21 T 23-04-2016 UPTC3659_RS05155 a4855eff191fc716394ca6abc28cbcd7 821 Gene3D G3DSA:3.55.50.10 129 209 1.7E-15 T 23-04-2016 UPTC3659_RS05155 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69279 8 214 2.21E-24 T 23-04-2016 UPTC3659_RS05155 a4855eff191fc716394ca6abc28cbcd7 821 Gene3D G3DSA:2.40.50.230 419 499 2.5E-19 T 23-04-2016 IPR006531 Gp5 N-terminal UPTC3659_RS05155 a4855eff191fc716394ca6abc28cbcd7 821 SUPERFAMILY SSF69255 401 499 1.57E-18 T 23-04-2016 UPTC3659_RS06140 ae0b0c98cdd0a9f7fea8a6e1ad4169dd 367 Gene3D G3DSA:3.30.460.10 13 147 5.0E-30 T 23-04-2016 UPTC3659_RS06140 ae0b0c98cdd0a9f7fea8a6e1ad4169dd 367 SUPERFAMILY SSF81891 146 364 1.16E-30 T 23-04-2016 UPTC3659_RS06140 ae0b0c98cdd0a9f7fea8a6e1ad4169dd 367 PANTHER PTHR13734 6 221 1.3E-37 T 23-04-2016 UPTC3659_RS06140 ae0b0c98cdd0a9f7fea8a6e1ad4169dd 367 Gene3D G3DSA:1.10.3090.10 148 284 1.2E-20 T 23-04-2016 UPTC3659_RS06140 ae0b0c98cdd0a9f7fea8a6e1ad4169dd 367 SUPERFAMILY SSF81301 13 145 4.36E-28 T 23-04-2016 UPTC3659_RS06140 ae0b0c98cdd0a9f7fea8a6e1ad4169dd 367 Pfam PF01743 Poly A polymerase head domain 28 148 1.3E-19 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 UPTC3659_RS04170 c87152fd991d488ed288d4abeccbc601 190 PANTHER PTHR34406:SF1 1 187 8.3E-38 T 23-04-2016 UPTC3659_RS04170 c87152fd991d488ed288d4abeccbc601 190 SUPERFAMILY SSF101874 23 189 2.49E-42 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like UPTC3659_RS04170 c87152fd991d488ed288d4abeccbc601 190 Pfam PF04264 YceI-like domain 25 186 2.2E-34 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like UPTC3659_RS04170 c87152fd991d488ed288d4abeccbc601 190 SMART SM00867 23 188 7.2E-46 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like UPTC3659_RS04170 c87152fd991d488ed288d4abeccbc601 190 Gene3D G3DSA:2.40.128.110 23 189 2.4E-46 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like UPTC3659_RS04170 c87152fd991d488ed288d4abeccbc601 190 PANTHER PTHR34406 1 187 8.3E-38 T 23-04-2016 UPTC3659_RS05645 b5562b5f343e0b927b1f558e2de035b0 271 Gene3D G3DSA:3.10.50.40 122 249 7.1E-38 T 23-04-2016 UPTC3659_RS05645 b5562b5f343e0b927b1f558e2de035b0 271 PANTHER PTHR10657 21 270 1.0E-39 T 23-04-2016 UPTC3659_RS05645 b5562b5f343e0b927b1f558e2de035b0 271 SUPERFAMILY SSF109998 21 153 3.06E-15 T 23-04-2016 IPR027304 Trigger factor/SurA domain UPTC3659_RS05645 b5562b5f343e0b927b1f558e2de035b0 271 Pfam PF13616 PPIC-type PPIASE domain 119 223 5.6E-22 T 23-04-2016 UPTC3659_RS05645 b5562b5f343e0b927b1f558e2de035b0 271 SUPERFAMILY SSF54534 122 223 4.32E-26 T 23-04-2016 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 Pfam PF01292 Prokaryotic cytochrome b561 17 222 8.5E-30 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 Gene3D G3DSA:1.20.950.20 11 230 1.7E-36 T 23-04-2016 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 PANTHER PTHR30485:SF0 1 229 8.3E-43 T 23-04-2016 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 15 227 1.3E-80 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 134 153 1.8E-24 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 183 205 1.8E-24 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 58 82 1.8E-24 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 214 227 1.8E-24 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 19 42 1.8E-24 T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 PANTHER PTHR30485 1 229 8.3E-43 T 23-04-2016 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 183 200 - T 23-04-2016 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 UPTC3659_RS04110 67ea52a046604fa6f7e6d6286546e154 230 SUPERFAMILY SSF81342 10 227 3.92E-36 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 SUPERFAMILY SSF54862 1 181 2.2E-49 T 23-04-2016 UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 Gene3D G3DSA:3.30.70.20 64 108 2.5E-20 T 23-04-2016 UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 PANTHER PTHR11938 142 166 4.7E-62 T 23-04-2016 UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 PANTHER PTHR11938 1 124 4.7E-62 T 23-04-2016 UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 PANTHER PTHR11938:SF96 142 166 4.7E-62 T 23-04-2016 UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 PANTHER PTHR11938:SF96 1 124 4.7E-62 T 23-04-2016 UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 Pfam PF13247 4Fe-4S dicluster domain 54 165 1.1E-11 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 Gene3D G3DSA:3.30.70.20 119 180 1.1E-21 T 23-04-2016 UPTC3659_RS01885 94c61f1e7922e999e92623e7ac92dfdd 189 Gene3D G3DSA:3.30.70.20 3 63 1.1E-21 T 23-04-2016 UPTC3659_RS00385 26eee336cc6e8097bf817ab4d9fe8b1c 191 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 188 8.1E-52 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00385 26eee336cc6e8097bf817ab4d9fe8b1c 191 PANTHER PTHR11229 95 191 3.0E-38 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00385 26eee336cc6e8097bf817ab4d9fe8b1c 191 Gene3D G3DSA:4.10.960.10 87 149 3.4E-21 T 23-04-2016 UPTC3659_RS00385 26eee336cc6e8097bf817ab4d9fe8b1c 191 Pfam PF00297 Ribosomal protein L3 95 160 2.8E-9 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00385 26eee336cc6e8097bf817ab4d9fe8b1c 191 SUPERFAMILY SSF50447 3 188 1.68E-45 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS08260 8c2700a34dad389724750b0db4215679 98 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 93 1.2E-23 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 UPTC3659_RS08260 8c2700a34dad389724750b0db4215679 98 PANTHER PTHR11434 1 93 6.1E-31 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 UPTC3659_RS08260 8c2700a34dad389724750b0db4215679 98 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 98 15.266 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 UPTC3659_RS02355 da177f792f9fe4980d5e631afbe94bfc 125 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 99 1.0E-15 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 UPTC3659_RS02355 da177f792f9fe4980d5e631afbe94bfc 125 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 59 125 1.9E-30 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 UPTC3659_RS02355 da177f792f9fe4980d5e631afbe94bfc 125 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 125 1.7E-49 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02355 da177f792f9fe4980d5e631afbe94bfc 125 Gene3D G3DSA:3.30.1390.10 53 125 1.3E-33 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like UPTC3659_RS02355 da177f792f9fe4980d5e631afbe94bfc 125 Gene3D G3DSA:1.20.5.710 2 52 4.1E-21 T 23-04-2016 UPTC3659_RS02355 da177f792f9fe4980d5e631afbe94bfc 125 SUPERFAMILY SSF48300 3 61 5.23E-16 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02355 da177f792f9fe4980d5e631afbe94bfc 125 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 52 2.3E-20 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02355 da177f792f9fe4980d5e631afbe94bfc 125 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 125 25.416 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS02355 da177f792f9fe4980d5e631afbe94bfc 125 SUPERFAMILY SSF54736 54 125 1.57E-25 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like UPTC3659_RS04045 d6fe844d92797fec0cc8221de316481a 124 Gene3D G3DSA:3.40.250.10 30 122 1.1E-21 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04045 d6fe844d92797fec0cc8221de316481a 124 Pfam PF00581 Rhodanese-like domain 31 115 7.0E-14 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04045 d6fe844d92797fec0cc8221de316481a 124 SUPERFAMILY SSF52821 25 121 3.4E-20 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS04045 d6fe844d92797fec0cc8221de316481a 124 SMART SM00450 15 121 3.2E-15 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS02495 5a36f3e5d3f50f1f7ac9e51dd56c43f3 143 PANTHER PTHR30625:SF6 16 132 8.9E-25 T 23-04-2016 UPTC3659_RS02495 5a36f3e5d3f50f1f7ac9e51dd56c43f3 143 TIGRFAM TIGR02805 exbB2: tonB-system energizer ExbB 2 137 4.3E-65 T 23-04-2016 IPR014172 TonB-system energizer ExbB type-2 GO:0006810|GO:0016020 UPTC3659_RS02495 5a36f3e5d3f50f1f7ac9e51dd56c43f3 143 Pfam PF01618 MotA/TolQ/ExbB proton channel family 49 135 4.1E-26 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 UPTC3659_RS02495 5a36f3e5d3f50f1f7ac9e51dd56c43f3 143 PANTHER PTHR30625 16 132 8.9E-25 T 23-04-2016 UPTC3659_RS02995 6732ba826020548458b46be1880b45cb 464 PANTHER PTHR36106:SF3 13 464 2.5E-262 T 23-04-2016 UPTC3659_RS02995 6732ba826020548458b46be1880b45cb 464 PANTHER PTHR36106 13 464 2.5E-262 T 23-04-2016 UPTC3659_RS02995 6732ba826020548458b46be1880b45cb 464 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 16 458 2.7E-169 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 UPTC3659_RS02995 6732ba826020548458b46be1880b45cb 464 PIRSF PIRSF004539 11 461 1.2E-191 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 UPTC3659_RS02995 6732ba826020548458b46be1880b45cb 464 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 16 394 9.7E-144 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 UPTC3659_RS01575 fb20056dadd16cd88dd988246463e059 381 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 373 1.9E-126 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain UPTC3659_RS01575 fb20056dadd16cd88dd988246463e059 381 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 374 2.5E-156 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 UPTC3659_RS01575 fb20056dadd16cd88dd988246463e059 381 SUPERFAMILY SSF53756 1 375 3.34E-136 T 23-04-2016 UPTC3659_RS01575 fb20056dadd16cd88dd988246463e059 381 Gene3D G3DSA:3.40.50.2000 215 374 9.8E-64 T 23-04-2016 UPTC3659_RS01575 fb20056dadd16cd88dd988246463e059 381 Gene3D G3DSA:3.40.50.2000 1 214 4.3E-86 T 23-04-2016 UPTC3659_RS01575 fb20056dadd16cd88dd988246463e059 381 PANTHER PTHR18964:SF2 1 373 2.9E-196 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 UPTC3659_RS01575 fb20056dadd16cd88dd988246463e059 381 PANTHER PTHR18964 1 373 2.9E-196 T 23-04-2016 UPTC3659_RS07570 15a2e6df52d034e5ee5ed4005c1f5d1b 443 SUPERFAMILY SSF53383 72 441 2.64E-37 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS07570 15a2e6df52d034e5ee5ed4005c1f5d1b 443 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 443 160.291 T 23-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 UPTC3659_RS07570 15a2e6df52d034e5ee5ed4005c1f5d1b 443 Gene3D G3DSA:3.40.640.10 121 308 7.6E-24 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS07570 15a2e6df52d034e5ee5ed4005c1f5d1b 443 PANTHER PTHR32328 1 442 1.9E-131 T 23-04-2016 UPTC3659_RS07570 15a2e6df52d034e5ee5ed4005c1f5d1b 443 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 4 439 9.9E-151 T 23-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 UPTC3659_RS07570 15a2e6df52d034e5ee5ed4005c1f5d1b 443 Pfam PF03841 L-seryl-tRNA selenium transferase 74 425 4.2E-135 T 23-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 UPTC3659_RS07570 15a2e6df52d034e5ee5ed4005c1f5d1b 443 PANTHER PTHR32328:SF0 1 442 1.9E-131 T 23-04-2016 UPTC3659_RS01285 19e323c187157cee910ad0666fa40a75 997 Pfam PF13395 HNH endonuclease 545 599 4.9E-23 T 23-04-2016 IPR003615 HNH nuclease UPTC3659_RS01285 19e323c187157cee910ad0666fa40a75 997 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 1 980 17.325 T 23-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 UPTC3659_RS01285 19e323c187157cee910ad0666fa40a75 997 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 3 773 9.0E-187 T 23-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 UPTC3659_RS08600 e5afc13dea108d67dbd04c516b8c526f 185 Pfam PF01765 Ribosome recycling factor 20 183 8.0E-62 T 23-04-2016 IPR023584 Ribosome recycling factor domain UPTC3659_RS08600 e5afc13dea108d67dbd04c516b8c526f 185 PANTHER PTHR20982 1 185 4.4E-73 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 UPTC3659_RS08600 e5afc13dea108d67dbd04c516b8c526f 185 SUPERFAMILY SSF55194 3 184 1.09E-66 T 23-04-2016 IPR023584 Ribosome recycling factor domain UPTC3659_RS08600 e5afc13dea108d67dbd04c516b8c526f 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 8.9E-73 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 UPTC3659_RS08600 e5afc13dea108d67dbd04c516b8c526f 185 Gene3D G3DSA:1.10.132.20 66 185 5.6E-42 T 23-04-2016 IPR023584 Ribosome recycling factor domain UPTC3659_RS08600 e5afc13dea108d67dbd04c516b8c526f 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.457 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 UPTC3659_RS00355 d1edb53b287dcbff7cf056470defdc53 197 PANTHER PTHR10695 10 185 9.1E-38 T 23-04-2016 UPTC3659_RS00355 d1edb53b287dcbff7cf056470defdc53 197 Pfam PF01121 Dephospho-CoA kinase 8 178 6.6E-37 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 UPTC3659_RS00355 d1edb53b287dcbff7cf056470defdc53 197 SUPERFAMILY SSF52540 5 190 1.97E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00355 d1edb53b287dcbff7cf056470defdc53 197 Gene3D G3DSA:3.40.50.300 7 193 2.3E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00355 d1edb53b287dcbff7cf056470defdc53 197 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 7 184 1.1E-42 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 UPTC3659_RS00355 d1edb53b287dcbff7cf056470defdc53 197 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 195 20.704 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 UPTC3659_RS08805 6f14c6e275a39dc016c9995812e68acd 570 SMART SM00382 349 487 8.2E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS08805 6f14c6e275a39dc016c9995812e68acd 570 SUPERFAMILY SSF52540 306 562 3.33E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08805 6f14c6e275a39dc016c9995812e68acd 570 Gene3D G3DSA:3.40.50.300 296 516 1.1E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08805 6f14c6e275a39dc016c9995812e68acd 570 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 484 7.9E-27 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 UPTC3659_RS08805 6f14c6e275a39dc016c9995812e68acd 570 PANTHER PTHR23077 336 554 5.2E-26 T 23-04-2016 UPTC3659_RS08030 9462e33637f9d8d81ce3311ee796fbc6 104 SUPERFAMILY SSF103481 4 101 3.53E-15 T 23-04-2016 UPTC3659_RS08030 9462e33637f9d8d81ce3311ee796fbc6 104 PANTHER PTHR30561:SF8 1 104 7.1E-33 T 23-04-2016 UPTC3659_RS08030 9462e33637f9d8d81ce3311ee796fbc6 104 PANTHER PTHR30561 1 104 7.1E-33 T 23-04-2016 UPTC3659_RS08030 9462e33637f9d8d81ce3311ee796fbc6 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 7.1E-24 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 Gene3D G3DSA:3.20.20.70 2 280 6.6E-67 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 Pfam PF04055 Radical SAM superfamily 15 175 3.2E-26 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 2 322 36.513 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 SUPERFAMILY SSF102114 2 270 3.53E-65 T 23-04-2016 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 302 1.9E-29 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 Pfam PF13394 4Fe-4S single cluster domain 18 121 5.0E-9 T 23-04-2016 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 PANTHER PTHR22960 1 274 1.2E-99 T 23-04-2016 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 SMART SM00729 11 212 3.3E-11 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS08215 39fb29587b4979bd37d7186e1942de02 322 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 322 9.0E-108 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 Gene3D G3DSA:3.40.50.300 3 15 7.2E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 Gene3D G3DSA:3.40.50.300 85 192 7.2E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 PANTHER PTHR23117 3 190 8.5E-80 T 23-04-2016 UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 182 6.6E-71 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 Gene3D G3DSA:3.30.63.10 39 84 2.5E-27 T 23-04-2016 UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 37 54 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 Pfam PF00625 Guanylate kinase 4 183 2.1E-48 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 SUPERFAMILY SSF52540 3 187 6.64E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 SMART SM00072 2 185 3.5E-58 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 Gene3D G3DSA:3.40.50.300 16 38 6.3E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06550 000dc3a44c5a78306b0e1db4872bb122 204 Hamap MF_00328 Guanylate kinase [gmk]. 1 185 34.973 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 UPTC3659_RS00780 4dcaaad3838d96d68e14e96279170092 444 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 8 440 7.3E-176 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 UPTC3659_RS00780 4dcaaad3838d96d68e14e96279170092 444 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 8 370 1.9E-134 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 UPTC3659_RS00780 4dcaaad3838d96d68e14e96279170092 444 PANTHER PTHR36106:SF2 4 444 5.7E-192 T 23-04-2016 UPTC3659_RS00780 4dcaaad3838d96d68e14e96279170092 444 PANTHER PTHR36106 4 444 5.7E-192 T 23-04-2016 UPTC3659_RS00780 4dcaaad3838d96d68e14e96279170092 444 PIRSF PIRSF004539 3 444 4.0E-172 T 23-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 310 4.8E-136 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 Gene3D G3DSA:3.90.226.10 50 264 7.3E-47 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 141 5.7E-52 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 146 159 3.1E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 162 175 3.1E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 190 199 3.1E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 106 124 3.1E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 92 3.1E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 127 143 3.1E-45 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 309 45.143 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 SUPERFAMILY SSF52096 28 309 1.63E-87 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 PANTHER PTHR22855:SF42 6 311 4.0E-106 T 23-04-2016 UPTC3659_RS01535 0207f56c31aa19bc5c84c1be460350d9 311 PANTHER PTHR22855 6 311 4.0E-106 T 23-04-2016 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 PANTHER PTHR11616 1 454 7.3E-140 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 Pfam PF00209 Sodium:neurotransmitter symporter family 157 453 3.0E-37 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 Pfam PF00209 Sodium:neurotransmitter symporter family 3 125 1.5E-24 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 434 454 1.3E-15 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.3E-15 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 259 279 1.3E-15 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.3E-15 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 PANTHER PTHR11616:SF167 1 454 7.3E-140 T 23-04-2016 UPTC3659_RS05620 8f9350c58b900b3d032b5384e67db13c 454 SUPERFAMILY SSF161070 3 453 5.62E-124 T 23-04-2016 UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 Gene3D G3DSA:1.10.340.30 46 139 7.2E-36 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 Pfam PF00633 Helix-hairpin-helix motif 118 146 8.2E-8 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 PANTHER PTHR10359 1 270 8.5E-69 T 23-04-2016 UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 Gene3D G3DSA:1.10.1670.10 140 229 8.8E-30 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 184 1.5E-17 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 PANTHER PTHR10359:SF1 1 270 8.5E-69 T 23-04-2016 UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 278 1.0E-89 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 SUPERFAMILY SSF48150 2 224 1.07E-58 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 SMART SM00525 204 224 0.0027 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 UPTC3659_RS00730 28f22a2c68682374583303fdb7381244 342 SMART SM00478 56 203 6.0E-39 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 UPTC3659_RS06250 e5b4b68349f178eff162026117a28155 374 Pfam PF13682 Chemoreceptor zinc-binding domain 259 322 3.4E-8 T 23-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 UPTC3659_RS06250 e5b4b68349f178eff162026117a28155 374 SUPERFAMILY SSF58104 61 273 1.57E-48 T 23-04-2016 UPTC3659_RS06250 e5b4b68349f178eff162026117a28155 374 Gene3D G3DSA:1.10.287.950 67 250 1.5E-45 T 23-04-2016 UPTC3659_RS06250 e5b4b68349f178eff162026117a28155 374 PANTHER PTHR32089 75 250 1.3E-42 T 23-04-2016 UPTC3659_RS06250 e5b4b68349f178eff162026117a28155 374 SMART SM00283 70 265 6.2E-13 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS06250 e5b4b68349f178eff162026117a28155 374 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 112 246 1.4E-32 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS06250 e5b4b68349f178eff162026117a28155 374 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 140 167 9.2E-17 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS06250 e5b4b68349f178eff162026117a28155 374 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 169 198 9.2E-17 T 23-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 UPTC3659_RS05675 4b2bc6d243ad4db12b96a39d59b69e82 202 Gene3D G3DSA:3.40.109.10 1 200 4.4E-55 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 UPTC3659_RS05675 4b2bc6d243ad4db12b96a39d59b69e82 202 PANTHER PTHR23026 2 199 7.7E-31 T 23-04-2016 UPTC3659_RS05675 4b2bc6d243ad4db12b96a39d59b69e82 202 PANTHER PTHR23026:SF101 2 199 7.7E-31 T 23-04-2016 UPTC3659_RS05675 4b2bc6d243ad4db12b96a39d59b69e82 202 Pfam PF00881 Nitroreductase family 9 180 1.1E-30 T 23-04-2016 IPR029479 Nitroreductase UPTC3659_RS05675 4b2bc6d243ad4db12b96a39d59b69e82 202 SUPERFAMILY SSF55469 1 200 4.97E-50 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 UPTC3659_RS01300 b34e5d39b2b91c8ca397e49d904837d3 163 Pfam PF04608 Phosphatidylglycerophosphatase A 3 143 1.0E-45 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 UPTC3659_RS01300 b34e5d39b2b91c8ca397e49d904837d3 163 Gene3D G3DSA:1.10.3760.10 39 141 1.4E-11 T 23-04-2016 IPR027416 YutG-like domain UPTC3659_RS01300 b34e5d39b2b91c8ca397e49d904837d3 163 PIRSF PIRSF006162 1 151 5.6E-43 T 23-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 UPTC3659_RS01300 b34e5d39b2b91c8ca397e49d904837d3 163 SUPERFAMILY SSF101307 3 144 3.14E-38 T 23-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 UPTC3659_RS01300 b34e5d39b2b91c8ca397e49d904837d3 163 PANTHER PTHR36305 3 149 8.3E-36 T 23-04-2016 UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PANTHER PTHR11206 217 424 8.2E-27 T 23-04-2016 UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PRINTS PR01806 Virulence factor MviN signature 55 71 1.3E-48 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PRINTS PR01806 Virulence factor MviN signature 414 431 1.3E-48 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PRINTS PR01806 Virulence factor MviN signature 357 376 1.3E-48 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PRINTS PR01806 Virulence factor MviN signature 36 55 1.3E-48 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PRINTS PR01806 Virulence factor MviN signature 152 173 1.3E-48 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PRINTS PR01806 Virulence factor MviN signature 128 152 1.3E-48 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PRINTS PR01806 Virulence factor MviN signature 259 285 1.3E-48 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PIRSF PIRSF002869 1 483 7.2E-103 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 7 465 5.7E-118 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 Pfam PF03023 MviN-like protein 32 476 1.3E-94 T 23-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ UPTC3659_RS03640 aa8091f32126319aa42d64593d20def2 484 PANTHER PTHR11206:SF90 217 424 8.2E-27 T 23-04-2016 UPTC3659_RS06860 6f217aceaccb74d1684d25c8fed29aa9 63 PANTHER PTHR34472 1 63 1.6E-14 T 23-04-2016 UPTC3659_RS06860 6f217aceaccb74d1684d25c8fed29aa9 63 SUPERFAMILY SSF54285 1 62 9.35E-15 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp UPTC3659_RS06860 6f217aceaccb74d1684d25c8fed29aa9 63 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 1 63 6.2E-20 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis UPTC3659_RS06860 6f217aceaccb74d1684d25c8fed29aa9 63 Gene3D G3DSA:3.10.20.30 1 63 3.8E-19 T 23-04-2016 IPR012675 Beta-grasp domain UPTC3659_RS06860 6f217aceaccb74d1684d25c8fed29aa9 63 PANTHER PTHR34472:SF1 1 63 1.6E-14 T 23-04-2016 UPTC3659_RS06860 6f217aceaccb74d1684d25c8fed29aa9 63 Pfam PF02597 ThiS family 20 63 1.8E-8 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 UPTC3659_RS08480 a510cdc9477acb92d70d1d5d07ad2f57 59 Pfam PF14070 Putative motility protein 5 45 1.8E-6 T 23-04-2016 IPR025906 Putative motility protein UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 PIRSF PIRSF000077 1 104 1.3E-38 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 11 102 2.3E-37 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 PRINTS PR00421 Thioredoxin family signature 20 28 4.1E-10 T 23-04-2016 UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 PRINTS PR00421 Thioredoxin family signature 68 79 4.1E-10 T 23-04-2016 UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 PRINTS PR00421 Thioredoxin family signature 28 37 4.1E-10 T 23-04-2016 UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 SUPERFAMILY SSF52833 3 104 4.84E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 Pfam PF00085 Thioredoxin 7 101 2.7E-31 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 Gene3D G3DSA:3.40.30.10 2 103 1.4E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS08145 f761c55ebfd38e97cb68b57aa1394bea 104 PANTHER PTHR10438 10 104 1.2E-36 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 UPTC3659_RS04370 ac29f09795d8a228a0a6068e65bc0838 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 173 2.4E-76 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 UPTC3659_RS04370 ac29f09795d8a228a0a6068e65bc0838 180 PIRSF PIRSF039093 1 179 2.4E-81 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 UPTC3659_RS04370 ac29f09795d8a228a0a6068e65bc0838 180 PANTHER PTHR32194 2 171 2.0E-90 T 23-04-2016 UPTC3659_RS04370 ac29f09795d8a228a0a6068e65bc0838 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 39.523 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 UPTC3659_RS04370 ac29f09795d8a228a0a6068e65bc0838 180 SUPERFAMILY SSF56235 1 176 1.97E-52 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal UPTC3659_RS04370 ac29f09795d8a228a0a6068e65bc0838 180 Gene3D G3DSA:3.60.20.10 5 177 2.8E-75 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal UPTC3659_RS04370 ac29f09795d8a228a0a6068e65bc0838 180 Pfam PF00227 Proteasome subunit 1 176 5.1E-26 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 UPTC3659_RS07360 6b8e87702e8b4c0f341ea034464a55a5 515 PANTHER PTHR22916 423 491 7.5E-27 T 23-04-2016 UPTC3659_RS07360 6b8e87702e8b4c0f341ea034464a55a5 515 PANTHER PTHR22916 261 395 7.5E-27 T 23-04-2016 UPTC3659_RS07360 6b8e87702e8b4c0f341ea034464a55a5 515 Pfam PF02709 N-terminal domain of galactosyltransferase 431 488 5.3E-16 T 23-04-2016 IPR027791 Galactosyltransferase, C-terminal UniPathway: UPA00378 UPTC3659_RS07360 6b8e87702e8b4c0f341ea034464a55a5 515 SUPERFAMILY SSF53448 256 494 1.73E-36 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07360 6b8e87702e8b4c0f341ea034464a55a5 515 Gene3D G3DSA:3.90.550.10 252 512 9.3E-50 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07360 6b8e87702e8b4c0f341ea034464a55a5 515 SUPERFAMILY SSF53448 2 150 1.65E-23 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07360 6b8e87702e8b4c0f341ea034464a55a5 515 Pfam PF00535 Glycosyl transferase family 2 260 365 7.9E-19 T 23-04-2016 IPR001173 Glycosyltransferase 2-like UPTC3659_RS07360 6b8e87702e8b4c0f341ea034464a55a5 515 Pfam PF00535 Glycosyl transferase family 2 7 100 9.6E-17 T 23-04-2016 IPR001173 Glycosyltransferase 2-like UPTC3659_RS07360 6b8e87702e8b4c0f341ea034464a55a5 515 Gene3D G3DSA:3.90.550.10 3 136 6.1E-20 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 SUPERFAMILY SSF52374 4 298 3.22E-106 T 23-04-2016 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 PANTHER PTHR11451 1 316 2.8E-93 T 23-04-2016 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 307 1.3E-103 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 SUPERFAMILY SSF48163 301 456 1.57E-31 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 456 1.8E-171 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 Gene3D G3DSA:1.10.1160.10 235 316 4.6E-34 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 4 457 31.537 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 8.0E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 8.0E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 197 205 8.0E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 8.0E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 PRINTS PR00987 Glutamyl-tRNA synthetase signature 181 191 8.0E-25 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 PANTHER PTHR11451:SF41 1 316 2.8E-93 T 23-04-2016 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 Gene3D G3DSA:3.90.800.10 69 181 2.6E-33 T 23-04-2016 UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 Gene3D G3DSA:3.40.50.620 4 68 5.5E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 Gene3D G3DSA:3.40.50.620 183 232 5.5E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS07605 fad2b5317c2ac7bea9b452c709d537f9 463 Gene3D G3DSA:1.10.10.350 363 457 1.3E-22 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 UPTC3659_RS06905 d73da72bff65e6c8276aa77e76b72fe4 57 SUPERFAMILY SSF116842 1 56 1.16E-9 T 23-04-2016 UPTC3659_RS06905 d73da72bff65e6c8276aa77e76b72fe4 57 Pfam PF02609 Exonuclease VII small subunit 3 54 2.6E-8 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 UPTC3659_RS06905 d73da72bff65e6c8276aa77e76b72fe4 57 Gene3D G3DSA:1.10.287.1040 1 56 1.3E-6 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 UPTC3659_RS06905 d73da72bff65e6c8276aa77e76b72fe4 57 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 3 57 7.9E-10 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 UPTC3659_RS06380 c5350973ca59ab052bb82262aafbcd14 75 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 4.0E-20 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 UPTC3659_RS06380 c5350973ca59ab052bb82262aafbcd14 75 Pfam PF02599 Global regulator protein family 1 52 4.1E-22 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 UPTC3659_RS06380 c5350973ca59ab052bb82262aafbcd14 75 PANTHER PTHR34984 1 75 8.9E-18 T 23-04-2016 UPTC3659_RS06380 c5350973ca59ab052bb82262aafbcd14 75 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 62 5.6E-22 T 23-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 UPTC3659_RS06380 c5350973ca59ab052bb82262aafbcd14 75 SUPERFAMILY SSF117130 1 55 2.75E-17 T 23-04-2016 UPTC3659_RS06380 c5350973ca59ab052bb82262aafbcd14 75 PANTHER PTHR34984:SF1 1 75 8.9E-18 T 23-04-2016 UPTC3659_RS01305 6b561ec4b9f93c6fc636d9121caac8c4 386 SUPERFAMILY SSF52374 132 346 3.49E-50 T 23-04-2016 UPTC3659_RS01305 6b561ec4b9f93c6fc636d9121caac8c4 386 Gene3D G3DSA:3.10.400.10 7 101 1.2E-5 T 23-04-2016 UPTC3659_RS01305 6b561ec4b9f93c6fc636d9121caac8c4 386 Gene3D G3DSA:3.40.50.620 142 349 2.2E-42 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS01305 6b561ec4b9f93c6fc636d9121caac8c4 386 Pfam PF01747 ATP-sulfurylase 140 338 3.8E-36 T 23-04-2016 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 UPTC3659_RS01305 6b561ec4b9f93c6fc636d9121caac8c4 386 SUPERFAMILY SSF88697 6 129 3.18E-12 T 23-04-2016 IPR015947 PUA-like domain UPTC3659_RS01525 68c76f276c30eb39c97f02cc442ff0c0 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 33 74 1.0E-13 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 UPTC3659_RS01525 68c76f276c30eb39c97f02cc442ff0c0 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 75 9.6E-31 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 UPTC3659_RS01525 68c76f276c30eb39c97f02cc442ff0c0 77 Gene3D G3DSA:1.10.1200.10 2 76 1.2E-28 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain UPTC3659_RS01525 68c76f276c30eb39c97f02cc442ff0c0 77 Pfam PF00550 Phosphopantetheine attachment site 6 72 3.7E-13 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain UPTC3659_RS01525 68c76f276c30eb39c97f02cc442ff0c0 77 SUPERFAMILY SSF47336 2 75 4.06E-20 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain UPTC3659_RS01525 68c76f276c30eb39c97f02cc442ff0c0 77 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 21.199 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 UPTC3659_RS01525 68c76f276c30eb39c97f02cc442ff0c0 77 PANTHER PTHR20863 3 75 3.1E-23 T 23-04-2016 UPTC3659_RS01525 68c76f276c30eb39c97f02cc442ff0c0 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site UPTC3659_RS06435 830af51e77f582979d21de7c0dd278ec 247 PANTHER PTHR10108 188 222 5.6E-15 T 23-04-2016 UPTC3659_RS06435 830af51e77f582979d21de7c0dd278ec 247 PANTHER PTHR10108 12 143 5.6E-15 T 23-04-2016 UPTC3659_RS06435 830af51e77f582979d21de7c0dd278ec 247 Gene3D G3DSA:3.40.50.150 4 237 1.6E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS06435 830af51e77f582979d21de7c0dd278ec 247 SUPERFAMILY SSF53335 5 225 1.42E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS06435 830af51e77f582979d21de7c0dd278ec 247 Pfam PF13649 Methyltransferase domain 39 130 5.3E-10 T 23-04-2016 UPTC3659_RS02590 4a1289e603f342655ef43564d7069971 151 Pfam PF01475 Ferric uptake regulator family 22 142 7.4E-40 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 UPTC3659_RS02590 4a1289e603f342655ef43564d7069971 151 PANTHER PTHR33202 1 151 5.6E-38 T 23-04-2016 UPTC3659_RS02590 4a1289e603f342655ef43564d7069971 151 SUPERFAMILY SSF46785 13 146 7.18E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS02590 4a1289e603f342655ef43564d7069971 151 Gene3D G3DSA:1.10.10.10 13 94 1.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS06895 66ec75474e350220e0801280b1736dbe 505 SUPERFAMILY SSF53649 130 484 4.71E-22 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 UPTC3659_RS06895 66ec75474e350220e0801280b1736dbe 505 Pfam PF00884 Sulfatase 129 409 1.6E-17 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 UPTC3659_RS06895 66ec75474e350220e0801280b1736dbe 505 Gene3D G3DSA:3.40.720.10 130 431 2.2E-16 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 UPTC3659_RS07075 c9897567faf43ea1c92b9a144e17e687 250 SUPERFAMILY SSF53448 1 248 4.06E-39 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07075 c9897567faf43ea1c92b9a144e17e687 250 PANTHER PTHR22572 2 94 1.6E-19 T 23-04-2016 UPTC3659_RS07075 c9897567faf43ea1c92b9a144e17e687 250 Gene3D G3DSA:3.90.550.10 1 248 6.5E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07075 c9897567faf43ea1c92b9a144e17e687 250 Pfam PF00483 Nucleotidyl transferase 3 125 3.9E-13 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 UPTC3659_RS06710 88b9b8014b7294731a9e1dbeb94ba44c 213 Gene3D G3DSA:3.40.50.10090 30 122 1.6E-15 T 23-04-2016 UPTC3659_RS06710 88b9b8014b7294731a9e1dbeb94ba44c 213 SUPERFAMILY SSF69618 17 209 1.11E-32 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06710 88b9b8014b7294731a9e1dbeb94ba44c 213 Pfam PF02602 Uroporphyrinogen-III synthase HemD 29 201 1.4E-23 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 UPTC3659_RS06710 88b9b8014b7294731a9e1dbeb94ba44c 213 Gene3D G3DSA:3.40.50.10090 123 190 8.4E-4 T 23-04-2016 UPTC3659_RS06085 0944e2d0b92fbb6b362f31a17282982d 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 89 103 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS06085 0944e2d0b92fbb6b362f31a17282982d 250 SUPERFAMILY SSF55120 55 228 7.68E-42 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS06085 0944e2d0b92fbb6b362f31a17282982d 250 PANTHER PTHR11079 50 239 2.4E-31 T 23-04-2016 UPTC3659_RS06085 0944e2d0b92fbb6b362f31a17282982d 250 Pfam PF00849 RNA pseudouridylate synthase 74 197 2.0E-23 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS06085 0944e2d0b92fbb6b362f31a17282982d 250 PANTHER PTHR11079:SF84 50 239 2.4E-31 T 23-04-2016 UPTC3659_RS07740 83a187076f3503e5c0f003c68f3ae5c5 94 Pfam PF12838 4Fe-4S dicluster domain 9 63 5.3E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS07740 83a187076f3503e5c0f003c68f3ae5c5 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS07740 83a187076f3503e5c0f003c68f3ae5c5 94 SUPERFAMILY SSF54862 5 69 2.51E-15 T 23-04-2016 UPTC3659_RS07740 83a187076f3503e5c0f003c68f3ae5c5 94 Gene3D G3DSA:3.30.70.20 5 69 2.8E-14 T 23-04-2016 UPTC3659_RS01220 5941402cd4c46371480a4ba65214fa7d 297 PANTHER PTHR33209 52 265 4.3E-59 T 23-04-2016 UPTC3659_RS01220 5941402cd4c46371480a4ba65214fa7d 297 Gene3D G3DSA:3.90.226.10 181 263 2.8E-49 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS01220 5941402cd4c46371480a4ba65214fa7d 297 Gene3D G3DSA:3.90.226.10 25 143 2.8E-49 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS01220 5941402cd4c46371480a4ba65214fa7d 297 SUPERFAMILY SSF52096 180 241 3.98E-39 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS01220 5941402cd4c46371480a4ba65214fa7d 297 SUPERFAMILY SSF52096 28 151 3.98E-39 T 23-04-2016 IPR029045 ClpP/crotonase-like domain UPTC3659_RS01220 5941402cd4c46371480a4ba65214fa7d 297 Pfam PF01343 Peptidase family S49 103 254 1.6E-53 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 UPTC3659_RS01220 5941402cd4c46371480a4ba65214fa7d 297 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 48 253 1.3E-69 T 23-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 SUPERFAMILY SSF56053 83 175 3.74E-35 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 PIRSF PIRSF002162 1 176 2.2E-45 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 Gene3D G3DSA:3.90.930.12 2 82 5.3E-22 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 35.618 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 PANTHER PTHR11655:SF14 1 178 5.4E-75 T 23-04-2016 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 PANTHER PTHR11655 1 178 5.4E-75 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 Gene3D G3DSA:3.90.930.12 83 176 7.6E-39 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 1.9E-69 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 Pfam PF00347 Ribosomal protein L6 11 82 1.2E-7 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 Pfam PF00347 Ribosomal protein L6 91 163 1.0E-19 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 PRINTS PR00059 Ribosomal protein L6 signature 140 161 7.2E-32 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 7.2E-32 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 7.2E-32 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00460 4aeca71b1fc11175e6b1726dc8948ba8 178 SUPERFAMILY SSF56053 2 82 2.75E-18 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.0E-38 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 PANTHER PTHR30244:SF1 3 181 2.3E-85 T 23-04-2016 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 PANTHER PTHR30244:SF1 326 491 2.3E-85 T 23-04-2016 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 PANTHER PTHR30244 3 181 2.3E-85 T 23-04-2016 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 PANTHER PTHR30244 326 491 2.3E-85 T 23-04-2016 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 Pfam PF00700 Bacterial flagellin C-terminal helical region 405 490 6.6E-25 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 Gene3D G3DSA:1.20.1330.10 55 171 2.8E-44 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 Gene3D G3DSA:1.20.1330.10 393 447 2.8E-44 T 23-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 SUPERFAMILY SSF64518 1 491 3.14E-92 T 23-04-2016 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 Pfam PF07196 Flagellin hook IN motif 188 240 7.3E-11 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 Pfam PF07196 Flagellin hook IN motif 252 300 6.5E-10 T 23-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 PRINTS PR00207 Flagellin signature 111 134 6.9E-19 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 PRINTS PR00207 Flagellin signature 76 95 6.9E-19 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 UPTC3659_RS00895 d48be4ea602b58ee0a4c3f676c2adc70 491 PRINTS PR00207 Flagellin signature 37 54 6.9E-19 T 23-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 UPTC3659_RS06225 ed4caeaaf4ad0e8bff58f921d7a302c0 254 PANTHER PTHR30231 34 243 5.9E-30 T 23-04-2016 UPTC3659_RS06225 ed4caeaaf4ad0e8bff58f921d7a302c0 254 Gene3D G3DSA:3.30.420.10 63 232 5.7E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS06225 ed4caeaaf4ad0e8bff58f921d7a302c0 254 Pfam PF00929 Exonuclease 74 223 2.0E-28 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III UPTC3659_RS06225 ed4caeaaf4ad0e8bff58f921d7a302c0 254 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 66 235 2.3E-23 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UPTC3659_RS06225 ed4caeaaf4ad0e8bff58f921d7a302c0 254 SMART SM00479 71 233 1.6E-32 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III UPTC3659_RS06225 ed4caeaaf4ad0e8bff58f921d7a302c0 254 SUPERFAMILY SSF53098 72 244 1.08E-41 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS03830 2f3943493a3288c8b8e31d167a3b41b0 249 Gene3D G3DSA:3.20.180.10 5 77 2.3E-10 T 23-04-2016 IPR019595 Domain of unknown function DUF2470 UPTC3659_RS03830 2f3943493a3288c8b8e31d167a3b41b0 249 Pfam PF10615 Protein of unknown function (DUF2470) 6 60 9.7E-8 T 23-04-2016 IPR019595 Domain of unknown function DUF2470 UPTC3659_RS03830 2f3943493a3288c8b8e31d167a3b41b0 249 TIGRFAM TIGR04109 heme_ox_HugZ: heme oxygenase, HugZ family 6 243 1.5E-93 T 23-04-2016 IPR026324 Haem oxygenase, HugZ UPTC3659_RS03830 2f3943493a3288c8b8e31d167a3b41b0 249 SUPERFAMILY SSF50475 84 236 1.03E-22 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 UPTC3659_RS03830 2f3943493a3288c8b8e31d167a3b41b0 249 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 87 177 6.9E-13 T 23-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 UPTC3659_RS03830 2f3943493a3288c8b8e31d167a3b41b0 249 Gene3D G3DSA:2.30.110.10 90 225 5.6E-33 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 UPTC3659_RS07790 a7083f1875a8c17ba33f69b9249bb6a4 334 PANTHER PTHR12304 1 322 2.2E-60 T 23-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase UPTC3659_RS07790 a7083f1875a8c17ba33f69b9249bb6a4 334 Gene3D G3DSA:3.90.245.10 2 320 7.0E-69 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain UPTC3659_RS07790 a7083f1875a8c17ba33f69b9249bb6a4 334 SUPERFAMILY SSF53590 2 320 2.75E-71 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain UPTC3659_RS07790 a7083f1875a8c17ba33f69b9249bb6a4 334 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 313 8.4E-50 T 23-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain UPTC3659_RS07425 399587b97a36bfc4f9468046af62716a 587 SUPERFAMILY SSF53335 111 325 1.11E-6 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07425 399587b97a36bfc4f9468046af62716a 587 SUPERFAMILY SSF51735 270 535 4.48E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07425 399587b97a36bfc4f9468046af62716a 587 Gene3D G3DSA:3.40.50.720 270 448 1.7E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS07425 399587b97a36bfc4f9468046af62716a 587 Gene3D G3DSA:3.90.25.10 449 524 7.0E-9 T 23-04-2016 UPTC3659_RS07425 399587b97a36bfc4f9468046af62716a 587 PANTHER PTHR10366 271 533 3.4E-103 T 23-04-2016 UPTC3659_RS07425 399587b97a36bfc4f9468046af62716a 587 PANTHER PTHR10366:SF256 271 533 3.4E-103 T 23-04-2016 UPTC3659_RS07425 399587b97a36bfc4f9468046af62716a 587 Pfam PF02719 Polysaccharide biosynthesis protein 272 545 6.2E-111 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain UPTC3659_RS07425 399587b97a36bfc4f9468046af62716a 587 Gene3D G3DSA:3.40.50.720 139 238 6.6E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08245 73abe5f230fec03ac6b8246070cbc6a4 465 PANTHER PTHR22773:SF41 4 458 6.2E-89 T 23-04-2016 UPTC3659_RS08245 73abe5f230fec03ac6b8246070cbc6a4 465 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 9 464 14.453 T 23-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08245 73abe5f230fec03ac6b8246070cbc6a4 465 Pfam PF00361 Proton-conducting membrane transporter 123 416 1.0E-45 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 UPTC3659_RS08245 73abe5f230fec03ac6b8246070cbc6a4 465 PANTHER PTHR22773 4 458 6.2E-89 T 23-04-2016 UPTC3659_RS00930 d8c4a7ac3c39d7b927df49a8d54b1be6 635 PANTHER PTHR41786 106 616 1.6E-14 T 23-04-2016 UPTC3659_RS00930 d8c4a7ac3c39d7b927df49a8d54b1be6 635 PANTHER PTHR41786:SF1 106 616 1.6E-14 T 23-04-2016 UPTC3659_RS00930 d8c4a7ac3c39d7b927df49a8d54b1be6 635 Pfam PF01973 Protein of unknown function DUF115 218 384 1.7E-39 T 23-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like UPTC3659_RS08865 86ce8ebc69e691fa002bdcd9e02bdf87 480 Gene3D G3DSA:1.20.1600.10 42 458 3.4E-103 T 23-04-2016 UPTC3659_RS08865 86ce8ebc69e691fa002bdcd9e02bdf87 480 Pfam PF02321 Outer membrane efflux protein 52 242 4.0E-31 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 UPTC3659_RS08865 86ce8ebc69e691fa002bdcd9e02bdf87 480 Pfam PF02321 Outer membrane efflux protein 275 451 7.4E-22 T 23-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 UPTC3659_RS08865 86ce8ebc69e691fa002bdcd9e02bdf87 480 PANTHER PTHR30203 37 474 3.0E-78 T 23-04-2016 UPTC3659_RS08865 86ce8ebc69e691fa002bdcd9e02bdf87 480 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 8 455 2.8E-86 T 23-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 UPTC3659_RS08865 86ce8ebc69e691fa002bdcd9e02bdf87 480 SUPERFAMILY SSF56954 2 456 1.01E-101 T 23-04-2016 UPTC3659_RS06840 9e7eeee42459131597c97c98a41bfdb1 204 Gene3D G3DSA:3.20.20.70 3 199 3.1E-41 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS06840 9e7eeee42459131597c97c98a41bfdb1 204 PANTHER PTHR20857 1 191 2.7E-18 T 23-04-2016 UPTC3659_RS06840 9e7eeee42459131597c97c98a41bfdb1 204 SUPERFAMILY SSF51391 3 197 4.58E-33 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS06840 9e7eeee42459131597c97c98a41bfdb1 204 Pfam PF02581 Thiamine monophosphate synthase/TENI 8 182 5.0E-27 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 Pfam PF05970 PIF1-like helicase 11 190 9.7E-27 T 23-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 Pfam PF02689 Helicase 360 413 1.5E-5 T 23-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 SUPERFAMILY SSF52540 8 141 8.95E-25 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 SMART SM00382 11 193 0.0012 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 Gene3D G3DSA:3.40.50.300 354 402 2.8E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 Gene3D G3DSA:3.40.50.300 137 247 2.8E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 Gene3D G3DSA:3.40.50.300 7 136 3.8E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 PANTHER PTHR23274 14 436 3.2E-77 T 23-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 SUPERFAMILY SSF52540 126 324 4.78E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02785 e27a27876e2f8dd885ad51b531eb4f9f 449 SUPERFAMILY SSF52540 358 415 4.78E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02930 de9782f63d5d48fd7303107b6cf3025f 127 SMART SM01234 2 69 5.1E-32 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor UPTC3659_RS02930 de9782f63d5d48fd7303107b6cf3025f 127 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 7 77 6.2E-27 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor UPTC3659_RS02930 de9782f63d5d48fd7303107b6cf3025f 127 PANTHER PTHR33383 7 69 1.7E-19 T 23-04-2016 UPTC3659_RS02930 de9782f63d5d48fd7303107b6cf3025f 127 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 70 2.0E-25 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor UPTC3659_RS02930 de9782f63d5d48fd7303107b6cf3025f 127 Pfam PF01809 Haemolytic domain 5 68 7.4E-23 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor UPTC3659_RS02930 de9782f63d5d48fd7303107b6cf3025f 127 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 20.19 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor UPTC3659_RS01790 60eb861802616262c2dfce76c5b55520 109 PANTHER PTHR33204 1 104 1.4E-46 T 23-04-2016 UPTC3659_RS01790 60eb861802616262c2dfce76c5b55520 109 Pfam PF01638 HxlR-like helix-turn-helix 18 107 1.6E-28 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type UPTC3659_RS01790 60eb861802616262c2dfce76c5b55520 109 SUPERFAMILY SSF46785 6 105 4.24E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01790 60eb861802616262c2dfce76c5b55520 109 PANTHER PTHR33204:SF12 1 104 1.4E-46 T 23-04-2016 UPTC3659_RS01790 60eb861802616262c2dfce76c5b55520 109 Gene3D G3DSA:1.10.10.10 3 107 1.7E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS05725 24e0d77404644e7d5a726a471e102391 327 SMART SM00450 3 130 3.4E-9 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS05725 24e0d77404644e7d5a726a471e102391 327 Gene3D G3DSA:3.40.50.300 140 304 1.0E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05725 24e0d77404644e7d5a726a471e102391 327 Gene3D G3DSA:3.40.250.10 6 128 5.0E-26 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS05725 24e0d77404644e7d5a726a471e102391 327 Pfam PF00581 Rhodanese-like domain 16 125 6.8E-9 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS05725 24e0d77404644e7d5a726a471e102391 327 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 305 1.7E-87 T 23-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 UPTC3659_RS05725 24e0d77404644e7d5a726a471e102391 327 PANTHER PTHR30401 17 249 3.0E-50 T 23-04-2016 UPTC3659_RS05725 24e0d77404644e7d5a726a471e102391 327 SUPERFAMILY SSF52821 17 133 4.19E-19 T 23-04-2016 IPR001763 Rhodanese-like domain UPTC3659_RS05725 24e0d77404644e7d5a726a471e102391 327 PANTHER PTHR30401:SF0 17 249 3.0E-50 T 23-04-2016 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 PANTHER PTHR30161:SF1 7 717 1.2E-288 T 23-04-2016 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 PANTHER PTHR30161 7 717 1.2E-288 T 23-04-2016 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 Pfam PF00771 FHIPEP family 36 706 7.4E-245 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 25 714 4.9E-275 T 23-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 PIRSF PIRSF005419 14 719 1.6E-228 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 43 56 7.3E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 196 213 7.3E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 147 163 7.3E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 247 261 7.3E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 80 99 7.3E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UPTC3659_RS05800 c5b2cfc98c60f6a802735227d613441d 719 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 166 184 7.3E-54 T 23-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 PANTHER PTHR18866 1 589 2.9E-61 T 23-04-2016 UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 Pfam PF00682 HMGL-like 7 280 6.0E-19 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 Gene3D G3DSA:2.40.50.100 522 590 7.9E-23 T 23-04-2016 UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 SUPERFAMILY SSF51230 515 590 1.7E-19 T 23-04-2016 IPR011053 Single hybrid motif UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 SUPERFAMILY SSF89000 307 463 6.67E-37 T 23-04-2016 UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 Gene3D G3DSA:3.20.20.70 2 289 2.3E-73 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 548 565 - T 23-04-2016 IPR001882 Biotin-binding site UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 Pfam PF00364 Biotin-requiring enzyme 529 590 1.4E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 SUPERFAMILY SSF51569 6 295 1.39E-58 T 23-04-2016 UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 PANTHER PTHR18866:SF109 1 589 2.9E-61 T 23-04-2016 UPTC3659_RS07165 a0777a4ea2c2eeea335e2ba0e2bfea36 592 Pfam PF02436 Conserved carboxylase domain 306 491 3.1E-40 T 23-04-2016 IPR003379 Carboxylase, conserved domain UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 439 4.4E-27 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PANTHER PTHR11444 1 436 3.5E-145 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.8E-7 T 23-04-2016 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.8E-7 T 23-04-2016 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.8E-7 T 23-04-2016 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.8E-7 T 23-04-2016 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 Gene3D G3DSA:1.20.200.10 90 355 5.1E-83 T 23-04-2016 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 Gene3D G3DSA:1.10.40.30 356 441 4.5E-34 T 23-04-2016 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 SUPERFAMILY SSF48557 3 441 6.75E-124 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PANTHER PTHR11444:SF2 1 436 3.5E-145 T 23-04-2016 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 Gene3D G3DSA:1.10.275.10 3 89 4.1E-30 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 SMART SM00998 349 441 1.2E-35 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 Pfam PF00206 Lyase 13 284 6.3E-47 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 3.5E-23 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 3.5E-23 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 3.5E-23 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.5E-23 T 23-04-2016 IPR000362 Fumarate lyase family UPTC3659_RS00145 b31968deb212bdb50c12b2b7c33a6122 442 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 439 4.5E-161 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 PIRSF PIRSF000497 1 397 1.8E-141 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 121 131 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 Gene3D G3DSA:3.30.300.10 269 396 1.3E-51 T 23-04-2016 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 PANTHER PTHR11964:SF1 2 393 1.4E-140 T 23-04-2016 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 SUPERFAMILY SSF55973 249 395 6.28E-50 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 Pfam PF02772 S-adenosylmethionine synthetase, central domain 119 242 7.4E-31 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 Gene3D G3DSA:3.30.300.10 9 114 3.4E-43 T 23-04-2016 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 Gene3D G3DSA:3.30.300.10 242 268 3.4E-43 T 23-04-2016 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 2 107 1.8E-30 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 3 396 4.8E-115 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 SUPERFAMILY SSF55973 2 115 1.57E-32 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 PANTHER PTHR11964 2 393 1.4E-140 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 Gene3D G3DSA:3.30.300.10 134 241 3.6E-25 T 23-04-2016 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 249 387 1.9E-49 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS06345 45e5284f8e373bb3a0ff20c274d34ac1 397 SUPERFAMILY SSF55973 119 243 8.24E-34 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 UPTC3659_RS03265 7d933a9c6764d7606b82adaae1e96433 256 SMART SM00671 208 243 2.5E-6 T 23-04-2016 IPR006597 Sel1-like repeat UPTC3659_RS03265 7d933a9c6764d7606b82adaae1e96433 256 Gene3D G3DSA:1.25.40.10 204 252 9.7E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS03265 7d933a9c6764d7606b82adaae1e96433 256 SUPERFAMILY SSF81901 186 244 3.4E-5 T 23-04-2016 UPTC3659_RS06430 114c14576a3c130f7d3fb5dd10bdabe4 594 Gene3D G3DSA:3.90.1310.10 165 257 2.0E-12 T 23-04-2016 UPTC3659_RS06430 114c14576a3c130f7d3fb5dd10bdabe4 594 SUPERFAMILY SSF56601 200 586 4.18E-71 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS06430 114c14576a3c130f7d3fb5dd10bdabe4 594 Pfam PF03717 Penicillin-binding Protein dimerisation domain 51 234 3.9E-21 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UPTC3659_RS06430 114c14576a3c130f7d3fb5dd10bdabe4 594 SUPERFAMILY SSF56519 50 250 4.05E-22 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UPTC3659_RS06430 114c14576a3c130f7d3fb5dd10bdabe4 594 Gene3D G3DSA:3.40.710.10 258 585 3.2E-71 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like UPTC3659_RS06430 114c14576a3c130f7d3fb5dd10bdabe4 594 PANTHER PTHR30627:SF1 160 594 1.8E-97 T 23-04-2016 UPTC3659_RS06430 114c14576a3c130f7d3fb5dd10bdabe4 594 Pfam PF00905 Penicillin binding protein transpeptidase domain 277 579 1.8E-62 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UPTC3659_RS06430 114c14576a3c130f7d3fb5dd10bdabe4 594 PANTHER PTHR30627 160 594 1.8E-97 T 23-04-2016 UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 SMART SM00862 151 222 9.1E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 Gene3D G3DSA:1.10.10.10 135 223 5.5E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 221 3.0E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 SUPERFAMILY SSF52172 3 160 6.69E-34 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 PANTHER PTHR26402:SF578 3 223 2.7E-52 T 23-04-2016 UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 SMART SM00448 3 114 3.5E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 Pfam PF00072 Response regulator receiver domain 5 114 9.0E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 SUPERFAMILY SSF46894 135 223 6.52E-18 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 Gene3D G3DSA:3.40.50.2300 2 126 1.8E-34 T 23-04-2016 UPTC3659_RS00715 6d18cf2982615fc65a0e080fe89b08b3 228 PANTHER PTHR26402 3 223 2.7E-52 T 23-04-2016 UPTC3659_RS02285 96ea09695bc39d8095eec26a714e40e3 406 SUPERFAMILY SSF56935 255 406 2.17E-21 T 23-04-2016 UPTC3659_RS02285 96ea09695bc39d8095eec26a714e40e3 406 SUPERFAMILY SSF56935 25 225 2.17E-21 T 23-04-2016 UPTC3659_RS02285 96ea09695bc39d8095eec26a714e40e3 406 Pfam PF05538 Campylobacter major outer membrane protein 1 406 2.4E-96 T 23-04-2016 IPR008439 Campylobacter major outer membrane UPTC3659_RS06645 96ea09695bc39d8095eec26a714e40e3 406 SUPERFAMILY SSF56935 255 406 2.17E-21 T 23-04-2016 UPTC3659_RS06645 96ea09695bc39d8095eec26a714e40e3 406 SUPERFAMILY SSF56935 25 225 2.17E-21 T 23-04-2016 UPTC3659_RS06645 96ea09695bc39d8095eec26a714e40e3 406 Pfam PF05538 Campylobacter major outer membrane protein 1 406 2.4E-96 T 23-04-2016 IPR008439 Campylobacter major outer membrane UPTC3659_RS07225 d3c9b6dd420c5fcc200650755bf9e778 502 PANTHER PTHR10668:SF5 1 499 1.6E-64 T 23-04-2016 UPTC3659_RS07225 d3c9b6dd420c5fcc200650755bf9e778 502 SUPERFAMILY SSF51905 5 325 4.8E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS07225 d3c9b6dd420c5fcc200650755bf9e778 502 SUPERFAMILY SSF51905 465 499 4.8E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS07225 d3c9b6dd420c5fcc200650755bf9e778 502 Pfam PF01593 Flavin containing amine oxidoreductase 15 498 1.1E-13 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 UPTC3659_RS07225 d3c9b6dd420c5fcc200650755bf9e778 502 PANTHER PTHR10668 1 499 1.6E-64 T 23-04-2016 UPTC3659_RS07225 d3c9b6dd420c5fcc200650755bf9e778 502 Gene3D G3DSA:3.50.50.60 201 307 4.2E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS07225 d3c9b6dd420c5fcc200650755bf9e778 502 Gene3D G3DSA:3.50.50.60 3 70 4.2E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UPTC3659_RS07665 2ca96840e5de55d3877162b2014d02fa 362 SUPERFAMILY SSF53901 41 345 1.98E-34 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS07665 2ca96840e5de55d3877162b2014d02fa 362 Gene3D G3DSA:3.40.47.10 178 197 3.8E-34 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS07665 2ca96840e5de55d3877162b2014d02fa 362 Gene3D G3DSA:3.40.47.10 230 348 3.8E-34 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS07665 2ca96840e5de55d3877162b2014d02fa 362 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 254 345 1.3E-16 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 UPTC3659_RS07665 2ca96840e5de55d3877162b2014d02fa 362 Gene3D G3DSA:3.40.47.10 8 177 3.4E-30 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS07665 2ca96840e5de55d3877162b2014d02fa 362 PANTHER PTHR34069:SF2 4 353 5.8E-56 T 23-04-2016 UPTC3659_RS07665 2ca96840e5de55d3877162b2014d02fa 362 PANTHER PTHR34069 4 353 5.8E-56 T 23-04-2016 UPTC3659_RS07665 2ca96840e5de55d3877162b2014d02fa 362 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 116 197 8.7E-13 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 Pfam PF01479 S4 domain 1 46 1.2E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 SUPERFAMILY SSF55120 60 250 1.62E-28 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 SMART SM00363 1 59 3.1E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 235 9.5E-43 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 SUPERFAMILY SSF55174 1 53 1.85E-10 T 23-04-2016 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 PANTHER PTHR21600:SF2 1 163 4.0E-44 T 23-04-2016 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 PANTHER PTHR21600:SF2 179 249 4.0E-44 T 23-04-2016 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 Pfam PF00849 RNA pseudouridylate synthase 61 203 5.3E-13 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 PANTHER PTHR21600 1 163 4.0E-44 T 23-04-2016 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 PANTHER PTHR21600 179 249 4.0E-44 T 23-04-2016 UPTC3659_RS00110 3a49de99b01e3afc61f66684e0661920 253 Gene3D G3DSA:3.10.290.10 1 53 1.0E-16 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 PANTHER PTHR11986 1 425 2.5E-190 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 Gene3D G3DSA:3.40.640.10 70 313 1.8E-74 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 2.9E-183 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 96.576 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 233 269 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 Pfam PF00202 Aminotransferase class-III 32 396 1.2E-74 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 Gene3D G3DSA:3.90.1150.10 319 423 1.4E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 Gene3D G3DSA:3.90.1150.10 2 69 1.4E-41 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 PANTHER PTHR11986:SF5 1 425 2.5E-190 T 23-04-2016 UPTC3659_RS03090 19365d64299d797248cb44b1f63b8934 425 SUPERFAMILY SSF53383 2 423 1.5E-123 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS00710 8ee721060e7e538ed3c68cfebfa335bd 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 434 2.1E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS00710 8ee721060e7e538ed3c68cfebfa335bd 437 SUPERFAMILY SSF55874 298 434 6.55E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS00710 8ee721060e7e538ed3c68cfebfa335bd 437 PANTHER PTHR24423 226 435 2.5E-30 T 23-04-2016 UPTC3659_RS00710 8ee721060e7e538ed3c68cfebfa335bd 437 SUPERFAMILY SSF47384 217 287 1.18E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS00710 8ee721060e7e538ed3c68cfebfa335bd 437 SMART SM00387 335 437 4.4E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS00710 8ee721060e7e538ed3c68cfebfa335bd 437 Gene3D G3DSA:1.10.287.130 221 287 7.1E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UPTC3659_RS00710 8ee721060e7e538ed3c68cfebfa335bd 437 Gene3D G3DSA:3.30.565.10 297 434 6.9E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain UPTC3659_RS01770 d89397bc79f3da5dfc7c2459304bf56a 605 Pfam PF00350 Dynamin family 64 216 8.2E-21 T 23-04-2016 IPR022812 Dynamin superfamily UPTC3659_RS01770 d89397bc79f3da5dfc7c2459304bf56a 605 SUPERFAMILY SSF52540 58 270 1.54E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01770 d89397bc79f3da5dfc7c2459304bf56a 605 Gene3D G3DSA:3.40.50.300 56 253 1.5E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 SUPERFAMILY SSF50465 307 399 5.28E-36 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 399 60.106 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 SUPERFAMILY SSF50447 210 306 4.71E-32 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 Pfam PF03144 Elongation factor Tu domain 2 230 298 4.2E-19 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 Gene3D G3DSA:3.40.50.300 3 213 1.0E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 Gene3D G3DSA:2.40.30.10 214 303 6.6E-37 T 23-04-2016 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 1.5E-58 T 23-04-2016 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 399 9.1E-230 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 6.5E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 SUPERFAMILY SSF52540 8 231 3.06E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 PANTHER PTHR23115 1 399 1.6E-247 T 23-04-2016 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 Gene3D G3DSA:2.40.30.10 305 398 1.2E-45 T 23-04-2016 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 PANTHER PTHR23115:SF112 1 399 1.6E-247 T 23-04-2016 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.3E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UPTC3659_RS02315 f9a767d61d32f075fcc17a34eb723974 399 Pfam PF03143 Elongation factor Tu C-terminal domain 303 397 9.4E-33 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal UPTC3659_RS07670 763ce590e26dd792379088b1f8daf1bc 357 PANTHER PTHR34069:SF2 4 349 4.2E-49 T 23-04-2016 UPTC3659_RS07670 763ce590e26dd792379088b1f8daf1bc 357 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 116 188 2.8E-11 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 UPTC3659_RS07670 763ce590e26dd792379088b1f8daf1bc 357 Gene3D G3DSA:3.40.47.10 8 173 1.6E-29 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS07670 763ce590e26dd792379088b1f8daf1bc 357 Gene3D G3DSA:3.40.47.10 226 344 4.7E-31 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS07670 763ce590e26dd792379088b1f8daf1bc 357 Gene3D G3DSA:3.40.47.10 174 193 4.7E-31 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS07670 763ce590e26dd792379088b1f8daf1bc 357 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 250 341 5.4E-15 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 UPTC3659_RS07670 763ce590e26dd792379088b1f8daf1bc 357 PANTHER PTHR34069 4 349 4.2E-49 T 23-04-2016 UPTC3659_RS07670 763ce590e26dd792379088b1f8daf1bc 357 SUPERFAMILY SSF53901 41 341 6.02E-32 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 UPTC3659_RS04195 e6af32e3f035a5cd15a6381c1dae5921 176 Pfam PF01694 Rhomboid family 41 170 3.1E-26 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 UPTC3659_RS04195 e6af32e3f035a5cd15a6381c1dae5921 176 PANTHER PTHR22936 1 170 1.9E-24 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 UPTC3659_RS04195 e6af32e3f035a5cd15a6381c1dae5921 176 Gene3D G3DSA:1.20.1540.10 2 170 1.1E-28 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 UPTC3659_RS04195 e6af32e3f035a5cd15a6381c1dae5921 176 SUPERFAMILY SSF144091 2 172 7.19E-34 T 23-04-2016 UPTC3659_RS02690 2b473053a6db28a895e6237755852ed0 218 PANTHER PTHR31299 1 183 9.8E-19 T 23-04-2016 UPTC3659_RS02690 2b473053a6db28a895e6237755852ed0 218 Pfam PF00156 Phosphoribosyl transferase domain 8 185 9.0E-8 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 UPTC3659_RS02690 2b473053a6db28a895e6237755852ed0 218 Gene3D G3DSA:3.40.50.2020 4 63 7.7E-10 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS02690 2b473053a6db28a895e6237755852ed0 218 Gene3D G3DSA:3.40.50.2020 121 184 7.7E-10 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS02690 2b473053a6db28a895e6237755852ed0 218 SUPERFAMILY SSF53271 1 209 5.72E-29 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS04015 f5fbc7092bf6f35048a0744426e62e7c 468 Gene3D G3DSA:3.30.70.1450 148 212 3.8E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS04015 f5fbc7092bf6f35048a0744426e62e7c 468 Pfam PF02080 TrkA-C domain 148 210 4.1E-10 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS04015 f5fbc7092bf6f35048a0744426e62e7c 468 SUPERFAMILY SSF116726 145 211 2.49E-8 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UPTC3659_RS03280 441716385f97e0dbfad21a2ac2e1ed54 224 SMART SM00892 41 219 8.3E-22 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 UPTC3659_RS03280 441716385f97e0dbfad21a2ac2e1ed54 224 Gene3D G3DSA:3.40.570.10 32 217 2.5E-38 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 UPTC3659_RS03280 441716385f97e0dbfad21a2ac2e1ed54 224 SUPERFAMILY SSF54060 33 217 7.06E-44 T 23-04-2016 UPTC3659_RS03280 441716385f97e0dbfad21a2ac2e1ed54 224 SMART SM00477 42 224 6.9E-13 T 23-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 UPTC3659_RS03280 441716385f97e0dbfad21a2ac2e1ed54 224 Pfam PF01223 DNA/RNA non-specific endonuclease 25 217 2.7E-31 T 23-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 UPTC3659_RS03280 441716385f97e0dbfad21a2ac2e1ed54 224 PANTHER PTHR13966 37 186 1.7E-21 T 23-04-2016 UPTC3659_RS04500 92c0572f3c0cc144f209448dcd870ef6 174 ProSitePatterns PS01265 Tpx family signature. 81 92 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 UPTC3659_RS04500 92c0572f3c0cc144f209448dcd870ef6 174 Gene3D G3DSA:3.40.30.10 3 161 7.3E-41 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS04500 92c0572f3c0cc144f209448dcd870ef6 174 Pfam PF08534 Redoxin 19 156 1.7E-22 T 23-04-2016 IPR013740 Redoxin GO:0016491 UPTC3659_RS04500 92c0572f3c0cc144f209448dcd870ef6 174 PANTHER PTHR10681:SF81 6 157 3.9E-34 T 23-04-2016 UPTC3659_RS04500 92c0572f3c0cc144f209448dcd870ef6 174 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 163 33.996 T 23-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 UPTC3659_RS04500 92c0572f3c0cc144f209448dcd870ef6 174 SUPERFAMILY SSF52833 1 158 1.01E-37 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS04500 92c0572f3c0cc144f209448dcd870ef6 174 PANTHER PTHR10681 6 157 3.9E-34 T 23-04-2016 UPTC3659_RS08020 9fe328447040db1eb50e1cb7d95a1551 422 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 11 419 4.4E-157 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 UPTC3659_RS08020 9fe328447040db1eb50e1cb7d95a1551 422 Gene3D G3DSA:3.90.1150.10 2 61 4.6E-52 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS08020 9fe328447040db1eb50e1cb7d95a1551 422 Gene3D G3DSA:3.90.1150.10 327 421 4.6E-52 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS08020 9fe328447040db1eb50e1cb7d95a1551 422 PANTHER PTHR11986:SF8 2 422 4.6E-176 T 23-04-2016 UPTC3659_RS08020 9fe328447040db1eb50e1cb7d95a1551 422 PANTHER PTHR11986 2 422 4.6E-176 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UPTC3659_RS08020 9fe328447040db1eb50e1cb7d95a1551 422 SUPERFAMILY SSF53383 2 421 1.89E-118 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS08020 9fe328447040db1eb50e1cb7d95a1551 422 Gene3D G3DSA:3.40.640.10 62 325 1.1E-77 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS08020 9fe328447040db1eb50e1cb7d95a1551 422 PIRSF PIRSF000521 14 422 2.5E-21 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UPTC3659_RS08020 9fe328447040db1eb50e1cb7d95a1551 422 Pfam PF00202 Aminotransferase class-III 24 418 6.2E-108 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UPTC3659_RS01160 1019fe59285471e7c679056d98c63c50 275 SUPERFAMILY SSF51735 1 163 4.41E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01160 1019fe59285471e7c679056d98c63c50 275 Gene3D G3DSA:3.40.50.720 1 173 3.9E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS01160 1019fe59285471e7c679056d98c63c50 275 Pfam PF02153 Prephenate dehydrogenase 15 264 2.5E-71 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 UPTC3659_RS01160 1019fe59285471e7c679056d98c63c50 275 PANTHER PTHR21363 1 275 5.2E-61 T 23-04-2016 UPTC3659_RS01160 1019fe59285471e7c679056d98c63c50 275 PANTHER PTHR21363:SF0 1 275 5.2E-61 T 23-04-2016 UPTC3659_RS01160 1019fe59285471e7c679056d98c63c50 275 SUPERFAMILY SSF48179 170 275 3.17E-31 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 UPTC3659_RS02920 66ae20d053364e630c58b79e704f7f70 281 Gene3D G3DSA:3.30.30.80 1 51 1.1E-16 T 23-04-2016 IPR032782 Jag, N-terminal UPTC3659_RS02920 66ae20d053364e630c58b79e704f7f70 281 Pfam PF14804 Jag N-terminus 3 50 4.6E-13 T 23-04-2016 IPR032782 Jag, N-terminal UPTC3659_RS02920 66ae20d053364e630c58b79e704f7f70 281 Gene3D G3DSA:3.30.300.120 131 206 1.3E-11 T 23-04-2016 UPTC3659_RS02920 66ae20d053364e630c58b79e704f7f70 281 SMART SM01245 2 53 4.7E-16 T 23-04-2016 IPR032782 Jag, N-terminal UPTC3659_RS01900 69cce6c22e3e1fac7f3eef394c1bef80 312 SUPERFAMILY SSF55326 6 127 1.06E-31 T 23-04-2016 UPTC3659_RS01900 69cce6c22e3e1fac7f3eef394c1bef80 312 Gene3D G3DSA:3.90.650.10 131 308 1.0E-17 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS01900 69cce6c22e3e1fac7f3eef394c1bef80 312 TIGRFAM TIGR00476 selD: selenide, water dikinase 5 280 5.3E-94 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 UPTC3659_RS01900 69cce6c22e3e1fac7f3eef394c1bef80 312 Gene3D G3DSA:3.30.1330.10 6 128 2.8E-22 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS01900 69cce6c22e3e1fac7f3eef394c1bef80 312 SUPERFAMILY SSF56042 129 307 2.39E-42 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS01900 69cce6c22e3e1fac7f3eef394c1bef80 312 PIRSF PIRSF036407 2 312 1.3E-101 T 23-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 UPTC3659_RS01900 69cce6c22e3e1fac7f3eef394c1bef80 312 PANTHER PTHR10256 7 298 1.3E-78 T 23-04-2016 UPTC3659_RS01900 69cce6c22e3e1fac7f3eef394c1bef80 312 Pfam PF02769 AIR synthase related protein, C-terminal domain 135 309 6.0E-28 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain UPTC3659_RS01900 69cce6c22e3e1fac7f3eef394c1bef80 312 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 123 2.0E-16 T 23-04-2016 IPR016188 PurM-like, N-terminal domain UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 SUPERFAMILY SSF46565 4 108 5.5E-35 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 Pfam PF01556 DnaJ C terminal domain 131 272 1.7E-33 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 23-04-2016 IPR018253 DnaJ domain, conserved site UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 Gene3D G3DSA:2.60.260.20 128 192 2.7E-12 T 23-04-2016 UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 Gene3D G3DSA:2.60.260.20 197 273 9.7E-16 T 23-04-2016 UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 PANTHER PTHR24078:SF190 1 287 2.2E-75 T 23-04-2016 UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 Pfam PF00226 DnaJ domain 5 65 6.7E-28 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 PRINTS PR00625 DnaJ domain signature 6 24 1.5E-28 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 PRINTS PR00625 DnaJ domain signature 40 60 1.5E-28 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 PRINTS PR00625 DnaJ domain signature 60 79 1.5E-28 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 PRINTS PR00625 DnaJ domain signature 24 39 1.5E-28 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 SUPERFAMILY SSF49493 127 194 8.76E-12 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 SMART SM00271 3 60 1.1E-30 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 PANTHER PTHR24078 1 287 2.2E-75 T 23-04-2016 UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 Gene3D G3DSA:1.10.287.110 2 101 3.9E-35 T 23-04-2016 IPR001623 DnaJ domain UPTC3659_RS04475 c10f694cdec60c76b38f96be94dfee0d 290 SUPERFAMILY SSF49493 198 276 1.07E-17 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 UPTC3659_RS03670 73e2e6a42481ca288ba1f37aaa6ad517 466 PANTHER PTHR23135 147 458 2.3E-32 T 23-04-2016 UPTC3659_RS03670 73e2e6a42481ca288ba1f37aaa6ad517 466 Gene3D G3DSA:3.40.1190.10 144 258 4.6E-22 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS03670 73e2e6a42481ca288ba1f37aaa6ad517 466 Gene3D G3DSA:3.40.1190.10 279 346 4.8E-10 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS03670 73e2e6a42481ca288ba1f37aaa6ad517 466 Gene3D G3DSA:3.90.190.20 347 458 6.8E-9 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS03670 73e2e6a42481ca288ba1f37aaa6ad517 466 SUPERFAMILY SSF53244 345 458 2.87E-17 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 UPTC3659_RS03670 73e2e6a42481ca288ba1f37aaa6ad517 466 SUPERFAMILY SSF53623 149 342 1.31E-31 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS03670 73e2e6a42481ca288ba1f37aaa6ad517 466 Pfam PF08245 Mur ligase middle domain 155 265 9.3E-16 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PANTHER PTHR11922:SF7 1 187 1.5E-63 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 Pfam PF00117 Glutamine amidotransferase class-I 5 185 6.4E-44 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PANTHER PTHR11922 1 187 1.5E-63 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 Gene3D G3DSA:3.40.50.880 1 186 3.7E-59 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.9E-12 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 2.9E-12 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 49 58 2.9E-12 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 SUPERFAMILY SSF52317 1 186 1.04E-49 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 186 3.5E-46 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PRINTS PR00097 Anthranilate synthase component II signature 76 87 7.0E-27 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 7.0E-27 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PRINTS PR00097 Anthranilate synthase component II signature 121 133 7.0E-27 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PRINTS PR00097 Anthranilate synthase component II signature 49 58 7.0E-27 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PRINTS PR00097 Anthranilate synthase component II signature 101 109 7.0E-27 T 23-04-2016 UPTC3659_RS06025 4bd338427866df8ddb04368fb9e7be4d 187 PRINTS PR00097 Anthranilate synthase component II signature 3 17 7.0E-27 T 23-04-2016 UPTC3659_RS05975 769d51a715479bd1ccefdf039f30b4b8 249 PANTHER PTHR30487 1 243 2.7E-36 T 23-04-2016 UPTC3659_RS05975 769d51a715479bd1ccefdf039f30b4b8 249 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 7 88 4.9E-27 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- UPTC3659_RS05975 769d51a715479bd1ccefdf039f30b4b8 249 Pfam PF01478 Type IV leader peptidase family 102 219 2.6E-4 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 UPTC3659_RS05975 769d51a715479bd1ccefdf039f30b4b8 249 PANTHER PTHR30487:SF0 1 243 2.7E-36 T 23-04-2016 UPTC3659_RS07260 f4049d75aa589c0baf05ef6b33436bc0 418 Pfam PF03772 Competence protein 156 393 2.3E-19 T 23-04-2016 IPR004477 ComEC/Rec2-related protein UPTC3659_RS07260 f4049d75aa589c0baf05ef6b33436bc0 418 PANTHER PTHR30619:SF2 132 357 1.9E-12 T 23-04-2016 UPTC3659_RS07260 f4049d75aa589c0baf05ef6b33436bc0 418 PANTHER PTHR30619 132 357 1.9E-12 T 23-04-2016 UPTC3659_RS07260 f4049d75aa589c0baf05ef6b33436bc0 418 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 170 352 5.4E-12 T 23-04-2016 IPR004477 ComEC/Rec2-related protein UPTC3659_RS00265 6f747fed059a7950f58b68062585d935 249 Gene3D G3DSA:3.40.50.300 3 216 6.3E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00265 6f747fed059a7950f58b68062585d935 249 SUPERFAMILY SSF52540 4 216 7.55E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00265 6f747fed059a7950f58b68062585d935 249 SMART SM00382 28 206 7.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS00265 6f747fed059a7950f58b68062585d935 249 PANTHER PTHR24220 5 205 1.2E-62 T 23-04-2016 UPTC3659_RS00265 6f747fed059a7950f58b68062585d935 249 Pfam PF00005 ABC transporter 19 159 2.8E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS08535 8dc357191cf0d84b05feadfeeb4e487c 146 Pfam PF00075 RNase H 3 135 9.0E-42 T 23-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 UPTC3659_RS08535 8dc357191cf0d84b05feadfeeb4e487c 146 Gene3D G3DSA:3.30.420.10 3 138 1.4E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS08535 8dc357191cf0d84b05feadfeeb4e487c 146 PANTHER PTHR10642 3 135 3.3E-41 T 23-04-2016 UPTC3659_RS08535 8dc357191cf0d84b05feadfeeb4e487c 146 SUPERFAMILY SSF53098 4 135 8.73E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 PIRSF PIRSF500210 1 282 1.1E-87 T 23-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 1 281 29.774 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 2 134 2.1E-30 T 23-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 Gene3D G3DSA:3.30.540.10 1 150 9.0E-37 T 23-04-2016 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 SUPERFAMILY SSF56655 1 279 5.34E-71 T 23-04-2016 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 PANTHER PTHR11556 4 281 2.0E-69 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 PIRSF PIRSF000904 1 282 7.2E-90 T 23-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 38 53 4.7E-13 T 23-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 252 276 4.7E-13 T 23-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 108 126 4.7E-13 T 23-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 PRINTS PR01958 Sedoheptulose-1,7-bisphosphatase family signature 188 208 4.7E-13 T 23-04-2016 IPR023079 Sedoheptulose-1,7-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 UPTC3659_RS04145 37562c326b7c60c2f5be6488beca7c64 282 Gene3D G3DSA:3.40.190.80 153 280 5.8E-40 T 23-04-2016 UPTC3659_RS00105 ec7b74b7b77821ba3acf859218ea4a1b 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 87 2.0E-21 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00105 ec7b74b7b77821ba3acf859218ea4a1b 87 Gene3D G3DSA:1.20.58.110 1 86 1.1E-24 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00105 ec7b74b7b77821ba3acf859218ea4a1b 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 14.96 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00105 ec7b74b7b77821ba3acf859218ea4a1b 87 Pfam PF01649 Ribosomal protein S20 2 84 1.1E-22 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00105 ec7b74b7b77821ba3acf859218ea4a1b 87 SUPERFAMILY SSF46992 3 86 1.83E-24 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00105 ec7b74b7b77821ba3acf859218ea4a1b 87 PANTHER PTHR33398 1 87 2.6E-23 T 23-04-2016 UPTC3659_RS00105 ec7b74b7b77821ba3acf859218ea4a1b 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 1.9E-24 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS05510 89db5888e64c85820e91b1595824cd34 303 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 5 288 1.3E-41 T 23-04-2016 IPR010732 Type VI secretion, TssG-like UPTC3659_RS05510 89db5888e64c85820e91b1595824cd34 303 PANTHER PTHR35564 23 301 3.1E-20 T 23-04-2016 UPTC3659_RS05735 01448dc20971db2c880922697a837e35 366 SUPERFAMILY SSF53659 2 239 5.6E-64 T 23-04-2016 UPTC3659_RS05735 01448dc20971db2c880922697a837e35 366 SUPERFAMILY SSF53659 268 358 5.6E-64 T 23-04-2016 UPTC3659_RS05735 01448dc20971db2c880922697a837e35 366 PANTHER PTHR30004 1 239 5.4E-57 T 23-04-2016 UPTC3659_RS05735 01448dc20971db2c880922697a837e35 366 PANTHER PTHR30004 268 366 5.4E-57 T 23-04-2016 UPTC3659_RS05735 01448dc20971db2c880922697a837e35 366 Gene3D G3DSA:3.40.718.10 1 358 3.7E-93 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 UPTC3659_RS05735 01448dc20971db2c880922697a837e35 366 PANTHER PTHR30004:SF6 1 239 5.4E-57 T 23-04-2016 UPTC3659_RS05735 01448dc20971db2c880922697a837e35 366 PANTHER PTHR30004:SF6 268 366 5.4E-57 T 23-04-2016 UPTC3659_RS05735 01448dc20971db2c880922697a837e35 366 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 28 355 2.7E-80 T 23-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 UPTC3659_RS08735 87f70837889c58a18f868fcacc6ba744 462 Pfam PF17033 Carboxypeptidase controlling helical cell shape catalytic 16 262 1.3E-85 T 23-04-2016 IPR031489 D,L-carboxypeptidase, peptidase domain UPTC3659_RS08735 87f70837889c58a18f868fcacc6ba744 462 Pfam PF17129 C-terminal domain of metallo-carboxypeptidase 334 414 3.5E-15 T 23-04-2016 IPR033397 Metallo-carboxypeptidase, C-terminal domain UPTC3659_RS08735 87f70837889c58a18f868fcacc6ba744 462 Gene3D G3DSA:3.40.630.10 29 143 3.8E-9 T 23-04-2016 UPTC3659_RS08735 87f70837889c58a18f868fcacc6ba744 462 SUPERFAMILY SSF53187 195 264 2.44E-20 T 23-04-2016 UPTC3659_RS08735 87f70837889c58a18f868fcacc6ba744 462 SUPERFAMILY SSF53187 17 161 2.44E-20 T 23-04-2016 UPTC3659_RS01480 c6805aab6d10b3f909f528bf4f75db0a 224 Pfam PF13309 HTH domain 174 217 9.5E-18 T 23-04-2016 UPTC3659_RS01480 c6805aab6d10b3f909f528bf4f75db0a 224 PANTHER PTHR35568:SF1 1 223 8.6E-34 T 23-04-2016 UPTC3659_RS01480 c6805aab6d10b3f909f528bf4f75db0a 224 Pfam PF08348 YheO-like PAS domain 9 116 4.7E-29 T 23-04-2016 IPR013559 YheO-like UPTC3659_RS01480 c6805aab6d10b3f909f528bf4f75db0a 224 PANTHER PTHR35568 1 223 8.6E-34 T 23-04-2016 UPTC3659_RS01480 c6805aab6d10b3f909f528bf4f75db0a 224 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 12 123 3.0E-60 T 23-04-2016 IPR013559 YheO-like UPTC3659_RS05655 b23432eabb23618b83c3aa5c68ce893f 402 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 1 399 6.5E-178 T 23-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 UPTC3659_RS05655 b23432eabb23618b83c3aa5c68ce893f 402 Pfam PF03616 Sodium/glutamate symporter 2 367 1.1E-152 T 23-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 UPTC3659_RS05655 b23432eabb23618b83c3aa5c68ce893f 402 PANTHER PTHR36178:SF1 1 402 3.2E-179 T 23-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 UPTC3659_RS05655 b23432eabb23618b83c3aa5c68ce893f 402 PANTHER PTHR36178 1 402 3.2E-179 T 23-04-2016 UPTC3659_RS06210 24d3b7277bf5ce7c3b4e336bbcdac0ff 164 Gene3D G3DSA:1.10.3820.10 4 161 5.9E-24 T 23-04-2016 UPTC3659_RS06210 24d3b7277bf5ce7c3b4e336bbcdac0ff 164 PANTHER PTHR30333 6 161 4.1E-12 T 23-04-2016 UPTC3659_RS06210 24d3b7277bf5ce7c3b4e336bbcdac0ff 164 SUPERFAMILY SSF48695 19 161 6.22E-34 T 23-04-2016 IPR011031 Multihaem cytochrome UPTC3659_RS06210 24d3b7277bf5ce7c3b4e336bbcdac0ff 164 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 11 161 1.6E-20 T 23-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal UPTC3659_RS06210 24d3b7277bf5ce7c3b4e336bbcdac0ff 164 TIGRFAM TIGR03153 cytochr_NrfH: cytochrome c nitrite reductase, small subunit 15 160 8.0E-48 T 23-04-2016 IPR017571 Cytochrome c nitrite reductase, small subunit GO:0016021|GO:0022900 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 PANTHER PTHR10890 13 457 3.7E-154 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 SMART SM00840 338 402 0.0033 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 SUPERFAMILY SSF47323 310 458 8.5E-29 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 Gene3D G3DSA:3.40.50.620 18 297 2.8E-79 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 SUPERFAMILY SSF52374 5 306 1.72E-76 T 23-04-2016 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 Pfam PF09190 DALR domain 341 398 4.6E-7 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 6.8E-145 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 Gene3D G3DSA:1.20.120.640 300 392 2.9E-11 T 23-04-2016 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 306 1.3E-107 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 459 32.626 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 184 202 4.4E-23 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 215 236 4.4E-23 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 4.4E-23 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 UPTC3659_RS03635 3c97a0eaf2fa687d39137ff5ac937bf2 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 4.4E-23 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 PANTHER PTHR23293 2 153 1.4E-84 T 23-04-2016 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 PANTHER PTHR23293 240 297 1.4E-84 T 23-04-2016 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 PANTHER PTHR23293 173 206 1.4E-84 T 23-04-2016 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 PANTHER PTHR23293:SF6 2 153 1.4E-84 T 23-04-2016 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 PANTHER PTHR23293:SF6 240 297 1.4E-84 T 23-04-2016 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 PANTHER PTHR23293:SF6 173 206 1.4E-84 T 23-04-2016 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 Gene3D G3DSA:3.40.50.620 239 248 1.1E-58 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 Gene3D G3DSA:3.40.50.620 2 205 1.1E-58 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 SUPERFAMILY SSF52402 1 205 2.46E-69 T 23-04-2016 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 252 1.6E-58 T 23-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 PIRSF PIRSF002936 1 297 8.0E-147 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 UPTC3659_RS01640 69f5967fa51870fff5feeadefb6e14f6 297 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 4 297 6.2E-144 T 23-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 UPTC3659_RS01095 7670e2df21649cd6ecf94284b4c7b0cf 193 Gene3D G3DSA:3.10.50.40 127 141 2.8E-12 T 23-04-2016 UPTC3659_RS01095 7670e2df21649cd6ecf94284b4c7b0cf 193 Gene3D G3DSA:3.10.50.40 2 81 2.8E-12 T 23-04-2016 UPTC3659_RS01095 7670e2df21649cd6ecf94284b4c7b0cf 193 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 136 1.2E-7 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 UPTC3659_RS01095 7670e2df21649cd6ecf94284b4c7b0cf 193 PANTHER PTHR10516:SF316 1 84 1.1E-20 T 23-04-2016 UPTC3659_RS01095 7670e2df21649cd6ecf94284b4c7b0cf 193 PANTHER PTHR10516:SF316 130 193 1.1E-20 T 23-04-2016 UPTC3659_RS01095 7670e2df21649cd6ecf94284b4c7b0cf 193 SUPERFAMILY SSF54534 3 141 1.34E-28 T 23-04-2016 UPTC3659_RS01095 7670e2df21649cd6ecf94284b4c7b0cf 193 PANTHER PTHR10516 1 84 1.1E-20 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type UPTC3659_RS01095 7670e2df21649cd6ecf94284b4c7b0cf 193 PANTHER PTHR10516 130 193 1.1E-20 T 23-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type UPTC3659_RS02480 cfdc422224a99d67ac3ad24609115c24 150 Pfam PF04214 Protein of unknown function, DUF 47 116 3.4E-28 T 23-04-2016 IPR007332 Protein of unknown function DUF411 UPTC3659_RS01110 afe76a0f2fcbf696f636029c3847adb4 253 PANTHER PTHR11807:SF16 4 241 1.6E-55 T 23-04-2016 UPTC3659_RS01110 afe76a0f2fcbf696f636029c3847adb4 253 SUPERFAMILY SSF52402 5 201 1.01E-45 T 23-04-2016 UPTC3659_RS01110 afe76a0f2fcbf696f636029c3847adb4 253 PIRSF PIRSF004976 3 253 2.1E-65 T 23-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 UPTC3659_RS01110 afe76a0f2fcbf696f636029c3847adb4 253 PANTHER PTHR11807 4 241 1.6E-55 T 23-04-2016 UPTC3659_RS01110 afe76a0f2fcbf696f636029c3847adb4 253 Pfam PF01171 PP-loop family 27 190 5.2E-20 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal UPTC3659_RS01110 afe76a0f2fcbf696f636029c3847adb4 253 Gene3D G3DSA:3.40.50.620 12 189 1.4E-22 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS03120 a300cd47dca4aa3d6a36bca26093fd1b 254 Gene3D G3DSA:1.20.58.340 169 234 2.3E-17 T 23-04-2016 UPTC3659_RS03120 a300cd47dca4aa3d6a36bca26093fd1b 254 PANTHER PTHR21535 136 237 7.6E-14 T 23-04-2016 UPTC3659_RS03120 a300cd47dca4aa3d6a36bca26093fd1b 254 Pfam PF01544 CorA-like Mg2+ transporter protein 63 237 1.1E-24 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 UPTC3659_RS03120 a300cd47dca4aa3d6a36bca26093fd1b 254 SUPERFAMILY SSF144083 176 236 1.57E-14 T 23-04-2016 UPTC3659_RS07085 66366b07c3829c28b744857e3a3f584c 156 SUPERFAMILY SSF54523 7 146 1.02E-10 T 23-04-2016 UPTC3659_RS07085 66366b07c3829c28b744857e3a3f584c 156 Gene3D G3DSA:3.30.700.10 7 31 6.7E-4 T 23-04-2016 UPTC3659_RS07085 66366b07c3829c28b744857e3a3f584c 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 24 2.8E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site UPTC3659_RS07085 66366b07c3829c28b744857e3a3f584c 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 4.4E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site UPTC3659_RS01955 191750374b274ebcb7043f795a7c64b9 220 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 210 2.5E-41 T 23-04-2016 UPTC3659_RS01955 191750374b274ebcb7043f795a7c64b9 220 PANTHER PTHR42208:SF1 1 218 5.1E-16 T 23-04-2016 UPTC3659_RS01955 191750374b274ebcb7043f795a7c64b9 220 PANTHER PTHR42208 1 218 5.1E-16 T 23-04-2016 UPTC3659_RS08275 d9577912250b82e52bdaf60964b2fad8 332 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 53 68 - T 23-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 UPTC3659_RS08275 d9577912250b82e52bdaf60964b2fad8 332 PANTHER PTHR11432 8 332 8.8E-109 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 UPTC3659_RS08275 d9577912250b82e52bdaf60964b2fad8 332 Pfam PF00146 NADH dehydrogenase 14 326 3.4E-99 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 UPTC3659_RS08275 d9577912250b82e52bdaf60964b2fad8 332 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 7 332 21.497 T 23-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 UPTC3659_RS08275 d9577912250b82e52bdaf60964b2fad8 332 PANTHER PTHR11432:SF3 8 332 8.8E-109 T 23-04-2016 UPTC3659_RS05920 1afbb1287f1b92426670850cb5674028 119 PANTHER PTHR33303 2 116 6.4E-36 T 23-04-2016 UPTC3659_RS05920 1afbb1287f1b92426670850cb5674028 119 SUPERFAMILY SSF51735 1 116 3.84E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS05920 1afbb1287f1b92426670850cb5674028 119 Pfam PF13380 CoA binding domain 2 116 1.0E-33 T 23-04-2016 IPR003781 CoA-binding GO:0048037 UPTC3659_RS05920 1afbb1287f1b92426670850cb5674028 119 Gene3D G3DSA:3.40.50.720 1 118 6.3E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS05920 1afbb1287f1b92426670850cb5674028 119 SMART SM00881 1 90 1.3E-11 T 23-04-2016 IPR003781 CoA-binding GO:0048037 UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 SUPERFAMILY SSF81333 24 100 6.02E-19 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 ProSitePatterns PS00605 ATP synthase c subunit signature. 61 82 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 41 98 4.9E-14 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 Hamap MF_01396 ATP synthase subunit c [atpH]. 30 98 16.145 T 23-04-2016 UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 PANTHER PTHR10031 22 99 2.1E-16 T 23-04-2016 UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 Pfam PF00137 ATP synthase subunit C 32 94 1.5E-14 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 PRINTS PR00124 ATP synthase C subunit signature 54 69 2.2E-15 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 PRINTS PR00124 ATP synthase C subunit signature 71 96 2.2E-15 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 PRINTS PR00124 ATP synthase C subunit signature 33 52 2.2E-15 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 UPTC3659_RS07185 428909bef0002ba05d72ebfea852a9e8 107 Gene3D G3DSA:1.20.20.10 30 97 2.6E-22 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 UPTC3659_RS08675 f3c4a8638930576b848e7b61bea45829 407 Pfam PF13023 HD domain 191 376 2.1E-39 T 23-04-2016 IPR006674 HD domain UPTC3659_RS08675 f3c4a8638930576b848e7b61bea45829 407 SUPERFAMILY SSF109604 5 166 2.04E-5 T 23-04-2016 UPTC3659_RS08675 f3c4a8638930576b848e7b61bea45829 407 SUPERFAMILY SSF109604 180 289 6.2E-30 T 23-04-2016 UPTC3659_RS08675 f3c4a8638930576b848e7b61bea45829 407 SUPERFAMILY SSF109604 337 405 6.2E-30 T 23-04-2016 UPTC3659_RS08675 f3c4a8638930576b848e7b61bea45829 407 Gene3D G3DSA:1.10.3210.10 336 406 1.1E-53 T 23-04-2016 IPR006674 HD domain UPTC3659_RS08675 f3c4a8638930576b848e7b61bea45829 407 Gene3D G3DSA:1.10.3210.10 178 284 1.1E-53 T 23-04-2016 IPR006674 HD domain UPTC3659_RS07270 0bd8f7938af729d3b459605f29dea52d 460 PANTHER PTHR11748 28 458 1.2E-155 T 23-04-2016 UPTC3659_RS07270 0bd8f7938af729d3b459605f29dea52d 460 SUPERFAMILY SSF55103 219 459 1.08E-64 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 UPTC3659_RS07270 0bd8f7938af729d3b459605f29dea52d 460 Gene3D G3DSA:3.30.465.10 96 216 2.2E-39 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 UPTC3659_RS07270 0bd8f7938af729d3b459605f29dea52d 460 SUPERFAMILY SSF56176 9 216 8.88E-65 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 UPTC3659_RS07270 0bd8f7938af729d3b459605f29dea52d 460 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 5.3E-62 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 UPTC3659_RS07270 0bd8f7938af729d3b459605f29dea52d 460 Pfam PF01565 FAD binding domain 39 178 3.1E-41 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 UPTC3659_RS07270 0bd8f7938af729d3b459605f29dea52d 460 PANTHER PTHR11748:SF85 28 458 1.2E-155 T 23-04-2016 UPTC3659_RS07270 0bd8f7938af729d3b459605f29dea52d 460 Gene3D G3DSA:3.30.43.10 9 95 3.2E-27 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 UPTC3659_RS07270 0bd8f7938af729d3b459605f29dea52d 460 Gene3D G3DSA:1.10.45.10 419 460 1.3E-16 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 UPTC3659_RS07415 c8af32fff57e120ad12618d08152d301 198 Gene3D G3DSA:3.40.50.20 4 75 6.4E-25 T 23-04-2016 IPR016185 Pre-ATP-grasp domain UPTC3659_RS07415 c8af32fff57e120ad12618d08152d301 198 PANTHER PTHR23416:SF23 94 198 2.8E-17 T 23-04-2016 UPTC3659_RS07415 c8af32fff57e120ad12618d08152d301 198 PANTHER PTHR23416 94 198 2.8E-17 T 23-04-2016 UPTC3659_RS07415 c8af32fff57e120ad12618d08152d301 198 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 143 176 8.1E-8 T 23-04-2016 IPR001451 Hexapeptide repeat UPTC3659_RS07415 c8af32fff57e120ad12618d08152d301 198 SUPERFAMILY SSF51161 5 194 1.8E-38 T 23-04-2016 IPR011004 Trimeric LpxA-like UPTC3659_RS07415 c8af32fff57e120ad12618d08152d301 198 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 7 192 1.8E-56 T 23-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like UPTC3659_RS07415 c8af32fff57e120ad12618d08152d301 198 Gene3D G3DSA:2.160.10.10 78 194 1.7E-25 T 23-04-2016 UPTC3659_RS00130 f1ea61ac73d32a4975724b92cd41d2ee 356 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 354 4.9E-137 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS00130 f1ea61ac73d32a4975724b92cd41d2ee 356 Gene3D G3DSA:3.20.20.70 114 327 1.9E-12 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS00130 f1ea61ac73d32a4975724b92cd41d2ee 356 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 4 355 70.801 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS00130 f1ea61ac73d32a4975724b92cd41d2ee 356 SMART SM00729 112 327 0.005 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 UPTC3659_RS00130 f1ea61ac73d32a4975724b92cd41d2ee 356 PANTHER PTHR30544 6 356 4.2E-153 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS00130 f1ea61ac73d32a4975724b92cd41d2ee 356 Pfam PF04055 Radical SAM superfamily 117 285 8.3E-15 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 UPTC3659_RS00130 f1ea61ac73d32a4975724b92cd41d2ee 356 PIRSF PIRSF006004 3 356 2.6E-138 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS00130 f1ea61ac73d32a4975724b92cd41d2ee 356 SUPERFAMILY SSF102114 111 321 2.22E-12 T 23-04-2016 UPTC3659_RS00130 f1ea61ac73d32a4975724b92cd41d2ee 356 PANTHER PTHR30544:SF5 6 356 4.2E-153 T 23-04-2016 UPTC3659_RS06400 f30a06685aef70542ae1009a5743583e 97 Gene3D G3DSA:3.30.1390.10 6 96 2.4E-35 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like UPTC3659_RS06400 f30a06685aef70542ae1009a5743583e 97 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 15 92 1.1E-30 T 23-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 UPTC3659_RS06400 f30a06685aef70542ae1009a5743583e 97 SUPERFAMILY SSF54736 12 96 8.89E-28 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like UPTC3659_RS06400 f30a06685aef70542ae1009a5743583e 97 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 4 92 24.108 T 23-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS UPTC3659_RS06400 f30a06685aef70542ae1009a5743583e 97 PANTHER PTHR33473 2 95 2.5E-23 T 23-04-2016 UPTC3659_RS04455 7e42714df62aca3459aeff2983a4070f 208 PANTHER PTHR18901:SF14 4 182 1.9E-30 T 23-04-2016 UPTC3659_RS04455 7e42714df62aca3459aeff2983a4070f 208 PANTHER PTHR18901 4 182 1.9E-30 T 23-04-2016 UPTC3659_RS04455 7e42714df62aca3459aeff2983a4070f 208 Gene3D G3DSA:3.40.50.1000 84 185 1.1E-28 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS04455 7e42714df62aca3459aeff2983a4070f 208 Gene3D G3DSA:3.40.50.1000 4 13 1.1E-28 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS04455 7e42714df62aca3459aeff2983a4070f 208 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 173 6.2E-9 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 UPTC3659_RS04455 7e42714df62aca3459aeff2983a4070f 208 SUPERFAMILY SSF56784 4 185 4.94E-45 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS04455 7e42714df62aca3459aeff2983a4070f 208 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 179 1.8E-30 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS05715 beb5f974076c5ad8c39415fee56cc408 200 Gene3D G3DSA:3.20.20.70 83 169 4.1E-18 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS05715 beb5f974076c5ad8c39415fee56cc408 200 Pfam PF00218 Indole-3-glycerol phosphate synthase 82 168 8.6E-15 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 UPTC3659_RS05715 beb5f974076c5ad8c39415fee56cc408 200 PANTHER PTHR22854:SF2 83 167 1.5E-13 T 23-04-2016 UPTC3659_RS05715 beb5f974076c5ad8c39415fee56cc408 200 SUPERFAMILY SSF51366 43 187 9.77E-19 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 UPTC3659_RS05715 beb5f974076c5ad8c39415fee56cc408 200 PANTHER PTHR22854 83 167 1.5E-13 T 23-04-2016 UPTC3659_RS04080 ebcd2506be73c0b0e0977b6ccd7188c4 78 Gene3D G3DSA:3.30.1280.10 1 76 1.9E-31 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS04080 ebcd2506be73c0b0e0977b6ccd7188c4 78 PANTHER PTHR34696 1 76 1.3E-24 T 23-04-2016 UPTC3659_RS04080 ebcd2506be73c0b0e0977b6ccd7188c4 78 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 76 3.1E-30 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS04080 ebcd2506be73c0b0e0977b6ccd7188c4 78 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 76 7.2E-29 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS04080 ebcd2506be73c0b0e0977b6ccd7188c4 78 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 78 20.165 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS04080 ebcd2506be73c0b0e0977b6ccd7188c4 78 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 74 2.0E-30 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 UPTC3659_RS04080 ebcd2506be73c0b0e0977b6ccd7188c4 78 SUPERFAMILY SSF82697 1 76 2.27E-27 T 23-04-2016 UPTC3659_RS03695 250103b4458286e5bd581f5e4b737d07 350 SUPERFAMILY SSF53448 9 216 2.25E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS03695 250103b4458286e5bd581f5e4b737d07 350 Gene3D G3DSA:3.90.550.10 7 212 4.2E-20 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS03695 250103b4458286e5bd581f5e4b737d07 350 Pfam PF01501 Glycosyl transferase family 8 14 196 1.0E-11 T 23-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 UPTC3659_RS03825 d4362395352c8ca4bb8c2837a4041b2a 337 PANTHER PTHR10361:SF31 2 336 1.3E-122 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 UPTC3659_RS03825 d4362395352c8ca4bb8c2837a4041b2a 337 PANTHER PTHR10361 2 336 1.3E-122 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 UPTC3659_RS03825 d4362395352c8ca4bb8c2837a4041b2a 337 Pfam PF01758 Sodium Bile acid symporter family 47 242 4.0E-55 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 UPTC3659_RS03825 d4362395352c8ca4bb8c2837a4041b2a 337 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 2 332 3.0E-116 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 UPTC3659_RS03825 d4362395352c8ca4bb8c2837a4041b2a 337 PIRSF PIRSF005508 1 337 5.6E-122 T 23-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 UPTC3659_RS05605 b4c0591d11effaffe8fa1760aa6d72e4 564 PANTHER PTHR32234 24 562 2.8E-125 T 23-04-2016 UPTC3659_RS05605 b4c0591d11effaffe8fa1760aa6d72e4 564 PANTHER PTHR32234:SF0 24 562 2.8E-125 T 23-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 UPTC3659_RS05605 b4c0591d11effaffe8fa1760aa6d72e4 564 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 171 373 1.9E-15 T 23-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 UPTC3659_RS05605 b4c0591d11effaffe8fa1760aa6d72e4 564 Gene3D G3DSA:3.40.30.10 457 561 3.8E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS05605 b4c0591d11effaffe8fa1760aa6d72e4 564 SUPERFAMILY SSF52833 454 562 5.03E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS05605 b4c0591d11effaffe8fa1760aa6d72e4 564 Gene3D G3DSA:2.60.40.1250 14 130 3.0E-20 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain UPTC3659_RS05605 b4c0591d11effaffe8fa1760aa6d72e4 564 SUPERFAMILY SSF74863 17 130 7.98E-24 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain UPTC3659_RS05605 b4c0591d11effaffe8fa1760aa6d72e4 564 Pfam PF00085 Thioredoxin 463 562 1.7E-11 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 UPTC3659_RS05605 b4c0591d11effaffe8fa1760aa6d72e4 564 Pfam PF11412 Disulphide bond corrector protein DsbC 20 125 1.6E-13 T 23-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain UPTC3659_RS05890 cd434beb9b005013d944532c4bde8bc8 131 Pfam PF02623 FliW protein 4 115 1.5E-32 T 23-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 UPTC3659_RS05890 cd434beb9b005013d944532c4bde8bc8 131 PANTHER PTHR39190 9 115 9.4E-12 T 23-04-2016 UPTC3659_RS05890 cd434beb9b005013d944532c4bde8bc8 131 Gene3D G3DSA:2.30.290.10 3 117 4.9E-37 T 23-04-2016 IPR024046 Flagellar assembly factor FliW domain UPTC3659_RS05890 cd434beb9b005013d944532c4bde8bc8 131 SUPERFAMILY SSF141457 4 123 4.45E-37 T 23-04-2016 IPR024046 Flagellar assembly factor FliW domain UPTC3659_RS05890 cd434beb9b005013d944532c4bde8bc8 131 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 1 122 20.582 T 23-04-2016 IPR003775 Flagellar assembly factor FliW GO:0044780 UPTC3659_RS06190 9e13c623bb417b9acebb2cbadbe29fcf 264 PANTHER PTHR30435:SF19 1 264 1.8E-114 T 23-04-2016 UPTC3659_RS06190 9e13c623bb417b9acebb2cbadbe29fcf 264 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 262 1.3E-22 T 23-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UPTC3659_RS06190 9e13c623bb417b9acebb2cbadbe29fcf 264 PANTHER PTHR30435 1 264 1.8E-114 T 23-04-2016 UPTC3659_RS06190 9e13c623bb417b9acebb2cbadbe29fcf 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 138 1.5E-43 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G UPTC3659_RS06190 9e13c623bb417b9acebb2cbadbe29fcf 264 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 150 244 3.0E-28 T 23-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G UPTC3659_RS06190 9e13c623bb417b9acebb2cbadbe29fcf 264 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 262 1.2E-107 T 23-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 UPTC3659_RS06190 9e13c623bb417b9acebb2cbadbe29fcf 264 Pfam PF00460 Flagella basal body rod protein 5 35 5.0E-12 T 23-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UPTC3659_RS06190 9e13c623bb417b9acebb2cbadbe29fcf 264 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 23-04-2016 IPR019776 Flagellar basal body rod protein, conserved site UPTC3659_RS06190 9e13c623bb417b9acebb2cbadbe29fcf 264 SUPERFAMILY SSF117143 94 224 8.37E-34 T 23-04-2016 UPTC3659_RS08180 cc38edc948f95e73436c071e7e8e337b 272 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 85 96 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS08180 cc38edc948f95e73436c071e7e8e337b 272 SUPERFAMILY SSF53790 1 223 3.14E-57 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 UPTC3659_RS08180 cc38edc948f95e73436c071e7e8e337b 272 PIRSF PIRSF005917 1 272 2.6E-71 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS08180 cc38edc948f95e73436c071e7e8e337b 272 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 202 2.1E-17 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 UPTC3659_RS08180 cc38edc948f95e73436c071e7e8e337b 272 PANTHER PTHR21091 1 223 2.6E-42 T 23-04-2016 UPTC3659_RS08180 cc38edc948f95e73436c071e7e8e337b 272 PANTHER PTHR21091:SF18 1 223 2.6E-42 T 23-04-2016 UPTC3659_RS08180 cc38edc948f95e73436c071e7e8e337b 272 Gene3D G3DSA:3.40.1010.10 1 115 2.3E-9 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 UPTC3659_RS08180 cc38edc948f95e73436c071e7e8e337b 272 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 270 2.0E-68 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 UPTC3659_RS08180 cc38edc948f95e73436c071e7e8e337b 272 Gene3D G3DSA:3.30.950.10 116 226 2.2E-25 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 UPTC3659_RS03775 4bf98d408296d228c6f4c8e6166be066 152 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 18 146 3.0E-21 T 23-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 UPTC3659_RS03775 4bf98d408296d228c6f4c8e6166be066 152 Pfam PF03968 OstA-like protein 24 131 8.2E-20 T 23-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal UPTC3659_RS03775 4bf98d408296d228c6f4c8e6166be066 152 Gene3D G3DSA:2.60.450.10 19 146 8.1E-23 T 23-04-2016 UPTC3659_RS05850 b8b421731ac5e76498de1d62c71250fa 124 SUPERFAMILY SSF54995 1 100 4.58E-34 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS05850 b8b421731ac5e76498de1d62c71250fa 124 Gene3D G3DSA:3.30.70.60 1 99 1.7E-35 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 UPTC3659_RS05850 b8b421731ac5e76498de1d62c71250fa 124 PANTHER PTHR21011 1 124 8.7E-32 T 23-04-2016 UPTC3659_RS05850 b8b421731ac5e76498de1d62c71250fa 124 Pfam PF01250 Ribosomal protein S6 3 92 3.9E-30 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS05850 b8b421731ac5e76498de1d62c71250fa 124 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 22.347 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS05850 b8b421731ac5e76498de1d62c71250fa 124 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.1E-32 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 UPTC3659_RS01310 4da3cb8f9a1ae487d8eb73e1279b228c 291 SMART SM00448 1 102 0.0023 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS01310 4da3cb8f9a1ae487d8eb73e1279b228c 291 Gene3D G3DSA:3.40.50.2300 1 108 7.4E-12 T 23-04-2016 UPTC3659_RS01310 4da3cb8f9a1ae487d8eb73e1279b228c 291 Gene3D G3DSA:1.10.10.60 209 287 4.0E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 UPTC3659_RS01310 4da3cb8f9a1ae487d8eb73e1279b228c 291 PIRSF PIRSF016788 1 291 1.1E-102 T 23-04-2016 IPR014483 Fis-like DNA-binding domain-containing signal transduction response regulator, predicted UPTC3659_RS01310 4da3cb8f9a1ae487d8eb73e1279b228c 291 Pfam PF00072 Response regulator receiver domain 3 102 1.5E-5 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 UPTC3659_RS01310 4da3cb8f9a1ae487d8eb73e1279b228c 291 SUPERFAMILY SSF52172 1 113 1.39E-15 T 23-04-2016 IPR011006 CheY-like superfamily UPTC3659_RS01035 d088746d714630c3a7a2a64b9d3e62df 170 Pfam PF00430 ATP synthase B/B' CF(0) 30 149 5.2E-10 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 UPTC3659_RS01035 d088746d714630c3a7a2a64b9d3e62df 170 Hamap MF_01398 ATP synthase subunit b [atpF]. 14 169 8.723 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 UPTC3659_RS08820 b87333c0852468a60abd736f47c1eb08 310 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 309 2.1E-23 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 UPTC3659_RS08820 b87333c0852468a60abd736f47c1eb08 310 Gene3D G3DSA:3.40.50.720 110 287 1.2E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08820 b87333c0852468a60abd736f47c1eb08 310 Gene3D G3DSA:3.40.50.720 1 109 1.1E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08820 b87333c0852468a60abd736f47c1eb08 310 SUPERFAMILY SSF52283 1 122 4.73E-28 T 23-04-2016 UPTC3659_RS08820 b87333c0852468a60abd736f47c1eb08 310 SUPERFAMILY SSF51735 98 285 1.34E-46 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS08820 b87333c0852468a60abd736f47c1eb08 310 PANTHER PTHR10996 1 309 5.1E-83 T 23-04-2016 UPTC3659_RS08820 b87333c0852468a60abd736f47c1eb08 310 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 192 214 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site UPTC3659_RS08820 b87333c0852468a60abd736f47c1eb08 310 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 284 1.3E-50 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 UPTC3659_RS06115 3f5332b207158fbedb61e1250b79da78 164 PIRSF PIRSF001338 1 163 2.2E-64 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 UPTC3659_RS06115 3f5332b207158fbedb61e1250b79da78 164 PANTHER PTHR23046 4 164 5.2E-70 T 23-04-2016 UPTC3659_RS06115 3f5332b207158fbedb61e1250b79da78 164 Gene3D G3DSA:3.40.50.7700 4 160 1.7E-65 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 UPTC3659_RS06115 3f5332b207158fbedb61e1250b79da78 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 30.636 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 UPTC3659_RS06115 3f5332b207158fbedb61e1250b79da78 164 Pfam PF00731 AIR carboxylase 4 151 1.5E-58 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 UPTC3659_RS06115 3f5332b207158fbedb61e1250b79da78 164 SUPERFAMILY SSF52255 3 159 3.53E-61 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 UPTC3659_RS06115 3f5332b207158fbedb61e1250b79da78 164 SMART SM01001 2 153 1.1E-89 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 UPTC3659_RS06115 3f5332b207158fbedb61e1250b79da78 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 160 7.2E-61 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 UPTC3659_RS03840 6ef50a5220fa4891c302621fdb535116 156 PANTHER PTHR11839:SF13 7 150 1.3E-26 T 23-04-2016 UPTC3659_RS03840 6ef50a5220fa4891c302621fdb535116 156 SUPERFAMILY SSF55811 5 152 3.11E-23 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 UPTC3659_RS03840 6ef50a5220fa4891c302621fdb535116 156 PRINTS PR00502 NUDIX hydrolase family signature 38 52 3.7E-5 T 23-04-2016 IPR020476 NUDIX hydrolase UPTC3659_RS03840 6ef50a5220fa4891c302621fdb535116 156 PRINTS PR00502 NUDIX hydrolase family signature 52 67 3.7E-5 T 23-04-2016 IPR020476 NUDIX hydrolase UPTC3659_RS03840 6ef50a5220fa4891c302621fdb535116 156 PANTHER PTHR11839 7 150 1.3E-26 T 23-04-2016 UPTC3659_RS03840 6ef50a5220fa4891c302621fdb535116 156 Gene3D G3DSA:3.90.79.10 3 151 1.7E-26 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 UPTC3659_RS03840 6ef50a5220fa4891c302621fdb535116 156 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 UPTC3659_RS03840 6ef50a5220fa4891c302621fdb535116 156 Pfam PF00293 NUDIX domain 6 144 1.3E-19 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 UPTC3659_RS05710 3bf8358339ebbc8a387df82c1a1a5d38 411 SUPERFAMILY SSF48452 313 388 2.47E-6 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS05710 3bf8358339ebbc8a387df82c1a1a5d38 411 Gene3D G3DSA:1.25.40.10 243 280 1.7E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS05710 3bf8358339ebbc8a387df82c1a1a5d38 411 Gene3D G3DSA:1.25.40.10 344 388 1.7E-4 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS05710 3bf8358339ebbc8a387df82c1a1a5d38 411 SUPERFAMILY SSF81901 28 245 6.54E-8 T 23-04-2016 UPTC3659_RS05710 3bf8358339ebbc8a387df82c1a1a5d38 411 Gene3D G3DSA:1.25.40.10 117 242 2.6E-8 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS03085 d37caab075b6542266e0d509b5a120f8 92 Gene3D G3DSA:1.20.1250.20 20 84 2.0E-4 T 23-04-2016 UPTC3659_RS03085 d37caab075b6542266e0d509b5a120f8 92 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 17 65 3.4E-11 T 23-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter UPTC3659_RS03085 d37caab075b6542266e0d509b5a120f8 92 SUPERFAMILY SSF103473 21 76 2.22E-5 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS00070 b6b05d249b1f9d76e3c83a038cecc635 213 Pfam PF13505 Outer membrane protein beta-barrel domain 10 209 4.3E-11 T 23-04-2016 IPR027385 Outer membrane protein beta-barrel UPTC3659_RS00070 b6b05d249b1f9d76e3c83a038cecc635 213 Gene3D G3DSA:2.40.160.20 12 213 4.5E-12 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 UPTC3659_RS00070 b6b05d249b1f9d76e3c83a038cecc635 213 SUPERFAMILY SSF56925 25 213 3.14E-13 T 23-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 412 425 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 Gene3D G3DSA:1.10.601.10 125 457 1.9E-84 T 23-04-2016 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 Gene3D G3DSA:1.10.601.10 4 124 5.1E-6 T 23-04-2016 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 PANTHER PTHR30603 339 625 8.2E-159 T 23-04-2016 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 PANTHER PTHR30603 43 156 8.2E-159 T 23-04-2016 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 Pfam PF04545 Sigma-70, region 4 556 610 5.7E-20 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 SUPERFAMILY SSF88659 519 620 3.18E-26 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 PANTHER PTHR30603:SF0 339 625 8.2E-159 T 23-04-2016 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 PANTHER PTHR30603:SF0 43 156 8.2E-159 T 23-04-2016 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 3 622 35.418 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 Gene3D G3DSA:1.10.10.10 461 512 2.8E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 Pfam PF04542 Sigma-70 region 2 390 457 3.7E-21 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 Gene3D G3DSA:1.10.10.10 550 622 1.1E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 384 610 6.1E-41 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 PRINTS PR00046 Major sigma-70 factor signature 412 425 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 PRINTS PR00046 Major sigma-70 factor signature 597 608 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 PRINTS PR00046 Major sigma-70 factor signature 560 572 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 PRINTS PR00046 Major sigma-70 factor signature 436 444 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 PRINTS PR00046 Major sigma-70 factor signature 582 597 2.3E-29 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 SUPERFAMILY SSF88659 461 534 1.13E-16 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 SUPERFAMILY SSF88946 119 455 1.88E-63 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 384 621 4.4E-114 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 582 608 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 Pfam PF04539 Sigma-70 region 3 467 543 1.9E-22 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS06200 636e3b760bb6268ffb4e3240ec74fe49 625 Pfam PF00140 Sigma-70 factor, region 1.2 103 134 7.6E-12 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UPTC3659_RS01920 8b62db3ee654736b4bae908b24168c07 404 Pfam PF04143 Sulphur transport 244 387 2.8E-17 T 23-04-2016 IPR007272 Sulphur transport domain UPTC3659_RS01920 8b62db3ee654736b4bae908b24168c07 404 Pfam PF04143 Sulphur transport 3 159 1.1E-27 T 23-04-2016 IPR007272 Sulphur transport domain UPTC3659_RS01920 8b62db3ee654736b4bae908b24168c07 404 PANTHER PTHR30574:SF6 4 351 9.4E-157 T 23-04-2016 UPTC3659_RS01920 8b62db3ee654736b4bae908b24168c07 404 PANTHER PTHR30574 4 351 9.4E-157 T 23-04-2016 UPTC3659_RS02990 e875306d7220df375b4b8ad018d7b82c 618 Pfam PF05935 Arylsulfotransferase (ASST) 46 606 1.8E-174 T 23-04-2016 IPR010262 Arylsulfotransferase UPTC3659_RS04630 6530dc51127a8aba7da0b89e42a19241 899 PANTHER PTHR30071:SF5 586 897 1.3E-56 T 23-04-2016 UPTC3659_RS04630 6530dc51127a8aba7da0b89e42a19241 899 PANTHER PTHR30071 586 897 1.3E-56 T 23-04-2016 UPTC3659_RS04630 6530dc51127a8aba7da0b89e42a19241 899 Pfam PF05140 ResB-like family 191 283 4.7E-11 T 23-04-2016 IPR007816 ResB-like domain UPTC3659_RS04630 6530dc51127a8aba7da0b89e42a19241 899 Pfam PF01578 Cytochrome C assembly protein 658 860 4.0E-37 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 UPTC3659_RS01635 ae961e1a413b6630f639b5fa4e67aefb 221 Pfam PF00483 Nucleotidyl transferase 3 215 5.9E-28 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 UPTC3659_RS01635 ae961e1a413b6630f639b5fa4e67aefb 221 PANTHER PTHR22572 2 215 5.2E-54 T 23-04-2016 UPTC3659_RS01635 ae961e1a413b6630f639b5fa4e67aefb 221 SUPERFAMILY SSF53448 2 216 3.5E-51 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS01635 ae961e1a413b6630f639b5fa4e67aefb 221 Gene3D G3DSA:3.90.550.10 2 216 1.9E-56 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS04120 e7935c2fbcbe4529a8878d9ac864bd8d 140 Pfam PF11396 Putative beta-lactamase-inhibitor-like, PepSY-like 54 134 1.7E-18 T 23-04-2016 IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like UPTC3659_RS04120 e7935c2fbcbe4529a8878d9ac864bd8d 140 SUPERFAMILY SSF160574 18 137 3.14E-36 T 23-04-2016 UPTC3659_RS03380 ad2e1c84720544f204e5f53f4e3743eb 251 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 15 103 3.2E-8 T 23-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family UPTC3659_RS06375 5b7e9039c34bfa8cc3729618afcb3635 272 PANTHER PTHR13767 1 202 1.3E-49 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS06375 5b7e9039c34bfa8cc3729618afcb3635 272 SUPERFAMILY SSF55120 1 236 6.62E-63 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS06375 5b7e9039c34bfa8cc3729618afcb3635 272 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 170 2.5E-40 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 UPTC3659_RS06375 5b7e9039c34bfa8cc3729618afcb3635 272 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 270 12.419 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS06375 5b7e9039c34bfa8cc3729618afcb3635 272 PANTHER PTHR13767:SF2 1 202 1.3E-49 T 23-04-2016 UPTC3659_RS02045 f28f16729e99e4ffa70613006e4d9f62 463 PRINTS PR00811 Bacterial general secretion pathway protein D signature 407 425 2.9E-13 T 23-04-2016 IPR001775 GspD/PilQ family UPTC3659_RS02045 f28f16729e99e4ffa70613006e4d9f62 463 PRINTS PR00811 Bacterial general secretion pathway protein D signature 430 444 2.9E-13 T 23-04-2016 IPR001775 GspD/PilQ family UPTC3659_RS02045 f28f16729e99e4ffa70613006e4d9f62 463 PRINTS PR00811 Bacterial general secretion pathway protein D signature 209 219 2.9E-13 T 23-04-2016 IPR001775 GspD/PilQ family UPTC3659_RS02045 f28f16729e99e4ffa70613006e4d9f62 463 PRINTS PR00811 Bacterial general secretion pathway protein D signature 265 289 2.9E-13 T 23-04-2016 IPR001775 GspD/PilQ family UPTC3659_RS02045 f28f16729e99e4ffa70613006e4d9f62 463 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 175 442 8.7E-80 T 23-04-2016 IPR013358 Pilus biogenesis, MshL UPTC3659_RS02045 f28f16729e99e4ffa70613006e4d9f62 463 Pfam PF00263 Bacterial type II and III secretion system protein 269 443 1.6E-41 T 23-04-2016 IPR004846 Type II/III secretion system GO:0009306 UPTC3659_RS02045 f28f16729e99e4ffa70613006e4d9f62 463 PANTHER PTHR30332 175 445 1.3E-41 T 23-04-2016 UPTC3659_RS06805 c4635c988f92a37ed7c85e6e85d6f4aa 400 PANTHER PTHR30489 7 400 7.9E-47 T 23-04-2016 UPTC3659_RS06805 c4635c988f92a37ed7c85e6e85d6f4aa 400 Pfam PF02687 FtsX-like permease family 268 391 9.6E-18 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 UPTC3659_RS03095 9295d2cb57904e480c4dbff767e9348c 117 SUPERFAMILY SSF46626 4 109 7.16E-10 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS03095 9295d2cb57904e480c4dbff767e9348c 117 Gene3D G3DSA:1.10.760.10 29 113 1.6E-8 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS05595 a9aa91df6f0ed89a8bf3a1a439355f30 260 Gene3D G3DSA:1.10.3720.10 56 259 1.8E-46 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS05595 a9aa91df6f0ed89a8bf3a1a439355f30 260 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 154 6.7E-21 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 UPTC3659_RS05595 a9aa91df6f0ed89a8bf3a1a439355f30 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 258 1.8E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS05595 a9aa91df6f0ed89a8bf3a1a439355f30 260 SUPERFAMILY SSF161098 59 251 1.15E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS05595 a9aa91df6f0ed89a8bf3a1a439355f30 260 PANTHER PTHR30614 21 257 8.6E-68 T 23-04-2016 UPTC3659_RS00505 c3c81e5d3bef6c658c33dbd05b6ca146 183 Gene3D G3DSA:3.30.420.10 3 136 8.6E-28 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS00505 c3c81e5d3bef6c658c33dbd05b6ca146 183 SUPERFAMILY SSF53098 3 172 1.67E-50 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS00505 c3c81e5d3bef6c658c33dbd05b6ca146 183 Pfam PF01351 Ribonuclease HII 4 173 2.6E-24 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain UPTC3659_RS00505 c3c81e5d3bef6c658c33dbd05b6ca146 183 PANTHER PTHR10954 1 172 5.3E-44 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 UPTC3659_RS00180 54cef48b3d3545faedcac0d54f5a259e 288 Gene3D G3DSA:1.10.10.10 4 62 6.0E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS00180 54cef48b3d3545faedcac0d54f5a259e 288 SUPERFAMILY SSF46785 6 44 6.8E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS00180 54cef48b3d3545faedcac0d54f5a259e 288 Pfam PF08279 HTH domain 9 64 6.6E-9 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 UPTC3659_RS00180 54cef48b3d3545faedcac0d54f5a259e 288 Pfam PF13280 WYL domain 120 284 1.3E-16 T 23-04-2016 IPR026881 WYL domain UPTC3659_RS03295 bcbef1a8bd2c996a925278545979621c 233 SUPERFAMILY SSF51306 94 218 4.58E-20 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C UPTC3659_RS03295 bcbef1a8bd2c996a925278545979621c 233 Gene3D G3DSA:2.10.109.10 95 219 1.1E-19 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain UPTC3659_RS03295 bcbef1a8bd2c996a925278545979621c 233 Pfam PF00717 Peptidase S24-like 134 205 7.3E-11 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B UPTC3659_RS06815 7ef403f7ef178a3441307afd7ef21bb3 172 Pfam PF02169 LPP20 lipoprotein 65 159 3.4E-8 T 23-04-2016 IPR024952 Lipoprotein LPP20-like UPTC3659_RS06815 7ef403f7ef178a3441307afd7ef21bb3 172 PIRSF PIRSF028687 1 172 1.3E-44 T 23-04-2016 IPR007293 Flagellar protein FlgP UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 Gene3D G3DSA:2.30.330.10 11 92 1.3E-26 T 23-04-2016 UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 PRINTS PR00956 Flagellar motor switch protein FliN signature 14 30 4.6E-22 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 PRINTS PR00956 Flagellar motor switch protein FliN signature 47 60 4.6E-22 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 PRINTS PR00956 Flagellar motor switch protein FliN signature 31 47 4.6E-22 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 PRINTS PR00956 Flagellar motor switch protein FliN signature 60 75 4.6E-22 T 23-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 PANTHER PTHR30034 13 83 5.3E-12 T 23-04-2016 UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 14 85 4.2E-23 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 SUPERFAMILY SSF101801 12 88 3.53E-21 T 23-04-2016 IPR001543 Surface presentation of antigen (SpoA) UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 PANTHER PTHR30034:SF1 13 83 5.3E-12 T 23-04-2016 UPTC3659_RS00950 19ede5d2b4406e50832c8f59951a46e4 98 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 13 86 7.3E-25 T 23-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 UPTC3659_RS00305 5546db80ce9f1622978e689832f8ab05 511 Pfam PF08019 Domain of unknown function (DUF1705) 48 194 3.6E-35 T 23-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 UPTC3659_RS00305 5546db80ce9f1622978e689832f8ab05 511 SUPERFAMILY SSF53649 253 501 4.86E-17 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 UPTC3659_RS00305 5546db80ce9f1622978e689832f8ab05 511 Gene3D G3DSA:3.40.720.10 287 495 7.3E-11 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 UPTC3659_RS00305 5546db80ce9f1622978e689832f8ab05 511 PANTHER PTHR30443 1 504 4.9E-152 T 23-04-2016 UPTC3659_RS00305 5546db80ce9f1622978e689832f8ab05 511 PANTHER PTHR30443:SF0 1 504 4.9E-152 T 23-04-2016 UPTC3659_RS00305 5546db80ce9f1622978e689832f8ab05 511 Pfam PF00884 Sulfatase 219 490 1.0E-37 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 PRINTS PR00175 Sodium/alanine symporter signature 363 385 2.0E-44 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 PRINTS PR00175 Sodium/alanine symporter signature 90 112 2.0E-44 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 PRINTS PR00175 Sodium/alanine symporter signature 423 443 2.0E-44 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 PRINTS PR00175 Sodium/alanine symporter signature 311 329 2.0E-44 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 PRINTS PR00175 Sodium/alanine symporter signature 221 240 2.0E-44 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 PRINTS PR00175 Sodium/alanine symporter signature 193 211 2.0E-44 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 PANTHER PTHR30330 1 480 3.3E-190 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 Pfam PF01235 Sodium:alanine symporter family 52 466 3.3E-140 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 454 4.7E-128 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UPTC3659_RS03475 59f2932993e1639e4bc28f02363a0640 480 PANTHER PTHR30330:SF1 1 480 3.3E-190 T 23-04-2016 UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 SUPERFAMILY SSF53335 12 106 1.23E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 SUPERFAMILY SSF53335 136 318 1.23E-35 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 16 320 9.7E-21 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 Gene3D G3DSA:3.40.50.150 12 75 1.5E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 Gene3D G3DSA:3.40.50.150 220 246 1.5E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 Gene3D G3DSA:3.40.50.150 279 347 1.5E-15 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 235 247 4.3E-5 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 16 32 4.3E-5 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 66 79 4.3E-5 T 23-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 UPTC3659_RS00175 4529081e6ef504b4f62a77be01c0feea 363 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 238 244 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 SMART SM00283 464 655 4.4E-26 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 Pfam PF02743 Cache domain 59 239 3.5E-21 T 23-04-2016 IPR033479 Double Cache domain 1 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 511 593 3.8E-29 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 Gene3D G3DSA:1.10.287.950 456 647 4.0E-44 T 23-04-2016 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 PANTHER PTHR32089 137 347 1.0E-51 T 23-04-2016 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 PANTHER PTHR32089 401 421 1.0E-51 T 23-04-2016 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 PANTHER PTHR32089 467 647 1.0E-51 T 23-04-2016 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 Gene3D G3DSA:3.30.450.20 82 190 1.4E-17 T 23-04-2016 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 SUPERFAMILY SSF103190 56 198 1.1E-14 T 23-04-2016 IPR029151 Periplasmic sensor domain-like UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 SUPERFAMILY SSF58104 456 653 6.54E-49 T 23-04-2016 UPTC3659_RS00790 af7268fc2b197072298b7c787f743f8b 656 SUPERFAMILY SSF58104 337 367 6.54E-49 T 23-04-2016 UPTC3659_RS08125 99c20d4d2c4432efd6338227c4da9480 176 Pfam PF09624 Protein of unknown function (DUF2393) 23 175 3.1E-23 T 23-04-2016 IPR013417 Conserved hypothetical protein CHP02588 UPTC3659_RS00315 62cf571e9761deee79910c91e60f3356 186 PANTHER PTHR35529 2 186 1.5E-61 T 23-04-2016 UPTC3659_RS00315 62cf571e9761deee79910c91e60f3356 186 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.285 T 23-04-2016 IPR022929 Putative manganese efflux pump MntP UPTC3659_RS00315 62cf571e9761deee79910c91e60f3356 186 Pfam PF02659 Putative manganese efflux pump 31 181 1.0E-52 T 23-04-2016 IPR003810 Putative manganese efflux pump UPTC3659_RS05490 b4ae994b134d85db7731bde5ad9fce89 161 PIRSF PIRSF028301 1 161 2.9E-55 T 23-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 UPTC3659_RS05490 b4ae994b134d85db7731bde5ad9fce89 161 PANTHER PTHR35850:SF2 1 154 3.6E-58 T 23-04-2016 UPTC3659_RS05490 b4ae994b134d85db7731bde5ad9fce89 161 PANTHER PTHR35850 1 154 3.6E-58 T 23-04-2016 UPTC3659_RS05490 b4ae994b134d85db7731bde5ad9fce89 161 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 5 154 4.0E-52 T 23-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 UPTC3659_RS05490 b4ae994b134d85db7731bde5ad9fce89 161 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 3 156 8.2E-54 T 23-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 UPTC3659_RS01105 de616a792e5c91e009972f8f4ebd686e 228 Pfam PF01048 Phosphorylase superfamily 2 223 1.1E-44 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 UPTC3659_RS01105 de616a792e5c91e009972f8f4ebd686e 228 Gene3D G3DSA:3.40.50.1580 1 228 1.6E-69 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 UPTC3659_RS01105 de616a792e5c91e009972f8f4ebd686e 228 PANTHER PTHR21234 1 224 6.0E-42 T 23-04-2016 IPR018017 Nucleoside phosphorylase UPTC3659_RS01105 de616a792e5c91e009972f8f4ebd686e 228 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 1.4E-53 T 23-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 UPTC3659_RS01105 de616a792e5c91e009972f8f4ebd686e 228 SUPERFAMILY SSF53167 1 227 1.57E-64 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 UPTC3659_RS05500 ad2bbea8d80f5238c59dab8b95306e8a 130 SUPERFAMILY SSF160719 23 113 5.75E-12 T 23-04-2016 UPTC3659_RS05500 ad2bbea8d80f5238c59dab8b95306e8a 130 Gene3D G3DSA:3.10.450.40 25 106 1.1E-5 T 23-04-2016 UPTC3659_RS05500 ad2bbea8d80f5238c59dab8b95306e8a 130 Pfam PF04965 Gene 25-like lysozyme 26 104 2.1E-10 T 23-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD UPTC3659_RS07410 bce16a8d48c4ade093166eb5b6f33401 200 Pfam PF02397 Bacterial sugar transferase 7 180 1.2E-56 T 23-04-2016 IPR003362 Bacterial sugar transferase UPTC3659_RS07410 bce16a8d48c4ade093166eb5b6f33401 200 PANTHER PTHR30576:SF8 1 188 9.4E-95 T 23-04-2016 UPTC3659_RS07410 bce16a8d48c4ade093166eb5b6f33401 200 PANTHER PTHR30576 1 188 9.4E-95 T 23-04-2016 UPTC3659_RS03985 16e19fc1ab3482b39bbe8ee62dcd1433 245 PIRSF PIRSF039085 1 242 1.7E-104 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 UPTC3659_RS03985 16e19fc1ab3482b39bbe8ee62dcd1433 245 SUPERFAMILY SSF52540 3 237 5.7E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03985 16e19fc1ab3482b39bbe8ee62dcd1433 245 PANTHER PTHR24220 5 239 2.0E-124 T 23-04-2016 UPTC3659_RS03985 16e19fc1ab3482b39bbe8ee62dcd1433 245 Pfam PF00005 ABC transporter 19 167 9.1E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UPTC3659_RS03985 16e19fc1ab3482b39bbe8ee62dcd1433 245 PANTHER PTHR24220:SF447 5 239 2.0E-124 T 23-04-2016 UPTC3659_RS03985 16e19fc1ab3482b39bbe8ee62dcd1433 245 SMART SM00382 28 215 3.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain UPTC3659_RS03985 16e19fc1ab3482b39bbe8ee62dcd1433 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UPTC3659_RS03985 16e19fc1ab3482b39bbe8ee62dcd1433 245 Gene3D G3DSA:3.40.50.300 2 238 1.8E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 SUPERFAMILY SSF82771 11 102 6.54E-22 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 Gene3D G3DSA:4.10.860.10 178 235 5.0E-11 T 23-04-2016 IPR001943 UVR domain GO:0005515 UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 Pfam PF01541 GIY-YIG catalytic domain 14 95 1.5E-9 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 3 580 2.8E-150 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 SUPERFAMILY SSF47781 516 594 4.77E-7 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 379 533 6.0E-37 T 23-04-2016 IPR001162 UvrC family homology region UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 PANTHER PTHR30562 2 597 8.6E-148 T 23-04-2016 UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 SUPERFAMILY SSF46600 201 235 4.71E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 596 22.833 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 SMART SM00465 12 100 1.3E-21 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 PANTHER PTHR30562:SF1 2 597 8.6E-148 T 23-04-2016 UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 Gene3D G3DSA:3.40.1440.10 13 98 2.0E-12 T 23-04-2016 IPR027299 GIY-YIG domain UPTC3659_RS02645 bca44f32246d303fe28224cdc155e2d6 597 Pfam PF02151 UvrB/uvrC motif 201 233 4.8E-10 T 23-04-2016 IPR001943 UVR domain GO:0005515 UPTC3659_RS03860 e50243299b89875fd76f930f18c52204 381 SUPERFAMILY SSF51717 110 376 1.18E-76 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 UPTC3659_RS03860 e50243299b89875fd76f930f18c52204 381 PANTHER PTHR20941:SF1 119 379 7.1E-71 T 23-04-2016 UPTC3659_RS03860 e50243299b89875fd76f930f18c52204 381 PANTHER PTHR20941 119 379 7.1E-71 T 23-04-2016 UPTC3659_RS03860 e50243299b89875fd76f930f18c52204 381 Gene3D G3DSA:3.20.20.20 116 376 2.3E-76 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 UPTC3659_RS03860 e50243299b89875fd76f930f18c52204 381 PIRSF PIRSF000501 1 379 9.7E-165 T 23-04-2016 IPR016227 Dihydropteroate synthase, predicted KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 UPTC3659_RS03860 e50243299b89875fd76f930f18c52204 381 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 118 373 9.9E-75 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 UPTC3659_RS03860 e50243299b89875fd76f930f18c52204 381 Pfam PF00809 Pterin binding enzyme 120 359 5.6E-58 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 UPTC3659_RS00660 2913d4f679b12912d32d59283059c94d 370 PANTHER PTHR30188:SF3 29 370 3.1E-104 T 23-04-2016 UPTC3659_RS00660 2913d4f679b12912d32d59283059c94d 370 Gene3D G3DSA:3.30.750.24 38 90 1.2E-7 T 23-04-2016 IPR002645 STAS domain UPTC3659_RS00660 2913d4f679b12912d32d59283059c94d 370 Pfam PF02405 Permease MlaE 154 363 4.3E-68 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 UPTC3659_RS00660 2913d4f679b12912d32d59283059c94d 370 Pfam PF01740 STAS domain 38 90 2.3E-5 T 23-04-2016 IPR002645 STAS domain UPTC3659_RS00660 2913d4f679b12912d32d59283059c94d 370 SUPERFAMILY SSF52091 8 92 7.65E-12 T 23-04-2016 IPR002645 STAS domain UPTC3659_RS00660 2913d4f679b12912d32d59283059c94d 370 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 110 367 6.9E-77 T 23-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria UPTC3659_RS00660 2913d4f679b12912d32d59283059c94d 370 PANTHER PTHR30188 29 370 3.1E-104 T 23-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 UPTC3659_RS07815 c20a0be8c3eef7147dc85ebea79697bb 358 PANTHER PTHR21152 2 357 5.0E-143 T 23-04-2016 UPTC3659_RS07815 c20a0be8c3eef7147dc85ebea79697bb 358 Gene3D G3DSA:3.90.1150.10 254 357 7.8E-39 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS07815 c20a0be8c3eef7147dc85ebea79697bb 358 PIRSF PIRSF000525 1 358 1.1E-139 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 UPTC3659_RS07815 c20a0be8c3eef7147dc85ebea79697bb 358 Gene3D G3DSA:3.40.640.10 16 253 2.3E-81 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS07815 c20a0be8c3eef7147dc85ebea79697bb 358 SUPERFAMILY SSF53383 2 357 4.82E-97 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS07815 c20a0be8c3eef7147dc85ebea79697bb 358 Pfam PF00266 Aminotransferase class-V 3 346 4.3E-35 T 23-04-2016 IPR000192 Aminotransferase class V domain UPTC3659_RS07815 c20a0be8c3eef7147dc85ebea79697bb 358 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 357 44.067 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 UPTC3659_RS07815 c20a0be8c3eef7147dc85ebea79697bb 358 PANTHER PTHR21152:SF1 2 357 5.0E-143 T 23-04-2016 UPTC3659_RS07815 c20a0be8c3eef7147dc85ebea79697bb 358 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 357 1.8E-142 T 23-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 UPTC3659_RS05585 bcd64a52f8a534467000af64c7b589c1 148 SUPERFAMILY SSF55729 4 142 2.2E-18 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS05585 bcd64a52f8a534467000af64c7b589c1 148 Gene3D G3DSA:3.40.630.30 3 143 1.6E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS05585 bcd64a52f8a534467000af64c7b589c1 148 Pfam PF00583 Acetyltransferase (GNAT) family 67 135 2.9E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 UPTC3659_RS06725 bf03acb90a7dace0d4ef7b477811129d 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 11 263 6.2E-105 T 23-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UPTC3659_RS06725 bf03acb90a7dace0d4ef7b477811129d 269 PANTHER PTHR20858:SF17 1 266 1.7E-111 T 23-04-2016 UPTC3659_RS06725 bf03acb90a7dace0d4ef7b477811129d 269 SUPERFAMILY SSF53613 11 265 1.01E-76 T 23-04-2016 IPR029056 Ribokinase-like UPTC3659_RS06725 bf03acb90a7dace0d4ef7b477811129d 269 Gene3D G3DSA:3.40.1190.20 11 263 2.8E-95 T 23-04-2016 IPR029056 Ribokinase-like UPTC3659_RS06725 bf03acb90a7dace0d4ef7b477811129d 269 Pfam PF08543 Phosphomethylpyrimidine kinase 18 261 1.7E-91 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 UPTC3659_RS06725 bf03acb90a7dace0d4ef7b477811129d 269 PANTHER PTHR20858 1 266 1.7E-111 T 23-04-2016 UPTC3659_RS03115 d3cd457cb82be4c7ded89bc54d2b86d1 373 Gene3D G3DSA:3.20.20.105 1 371 6.7E-147 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS03115 d3cd457cb82be4c7ded89bc54d2b86d1 373 PANTHER PTHR21148:SF26 1 372 4.9E-144 T 23-04-2016 UPTC3659_RS03115 d3cd457cb82be4c7ded89bc54d2b86d1 373 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 370 3.1E-149 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS03115 d3cd457cb82be4c7ded89bc54d2b86d1 373 SUPERFAMILY SSF51713 1 370 6.67E-143 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS03115 d3cd457cb82be4c7ded89bc54d2b86d1 373 PANTHER PTHR21148 1 372 4.9E-144 T 23-04-2016 UPTC3659_RS03115 d3cd457cb82be4c7ded89bc54d2b86d1 373 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 370 1.6E-142 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS03115 d3cd457cb82be4c7ded89bc54d2b86d1 373 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 365 52.242 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS03115 d3cd457cb82be4c7ded89bc54d2b86d1 373 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 367 5.9E-84 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 UPTC3659_RS01130 ca2d3dc23e84368d34545afd9b0889e2 308 Pfam PF01207 Dihydrouridine synthase (Dus) 11 302 3.5E-74 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 UPTC3659_RS01130 ca2d3dc23e84368d34545afd9b0889e2 308 Gene3D G3DSA:3.20.20.70 6 240 1.1E-70 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS01130 ca2d3dc23e84368d34545afd9b0889e2 308 PANTHER PTHR11082:SF25 6 308 3.0E-101 T 23-04-2016 UPTC3659_RS01130 ca2d3dc23e84368d34545afd9b0889e2 308 PANTHER PTHR11082 6 308 3.0E-101 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 UPTC3659_RS01130 ca2d3dc23e84368d34545afd9b0889e2 308 Gene3D G3DSA:1.10.1200.80 245 307 8.3E-17 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 UPTC3659_RS01130 ca2d3dc23e84368d34545afd9b0889e2 308 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 UPTC3659_RS01130 ca2d3dc23e84368d34545afd9b0889e2 308 SUPERFAMILY SSF51395 8 306 1.3E-71 T 23-04-2016 UPTC3659_RS01130 ca2d3dc23e84368d34545afd9b0889e2 308 PIRSF PIRSF006621 2 308 9.7E-82 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 UPTC3659_RS08330 1e0995a76d5cbe55561315a25324a1af 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 309 8.5E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS08330 1e0995a76d5cbe55561315a25324a1af 312 PANTHER PTHR30465 1 311 6.5E-73 T 23-04-2016 UPTC3659_RS08330 1e0995a76d5cbe55561315a25324a1af 312 SUPERFAMILY SSF161098 88 296 2.09E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS08330 1e0995a76d5cbe55561315a25324a1af 312 PANTHER PTHR30465:SF24 1 311 6.5E-73 T 23-04-2016 UPTC3659_RS08330 1e0995a76d5cbe55561315a25324a1af 312 Gene3D G3DSA:1.10.3720.10 90 307 3.3E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS02970 5024a12cec4b5e56da24c13231894e2e 216 PANTHER PTHR35891 1 216 1.4E-26 T 23-04-2016 UPTC3659_RS02970 5024a12cec4b5e56da24c13231894e2e 216 SUPERFAMILY SSF52833 25 213 2.24E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS02970 5024a12cec4b5e56da24c13231894e2e 216 Gene3D G3DSA:3.40.30.10 27 216 2.0E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS04625 7cd1f9fbda248c816819a2d89802c449 199 SUPERFAMILY SSF52833 65 174 1.86E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS04625 7cd1f9fbda248c816819a2d89802c449 199 Gene3D G3DSA:3.40.30.10 63 175 7.8E-17 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS04625 7cd1f9fbda248c816819a2d89802c449 199 Pfam PF13098 Thioredoxin-like domain 65 169 2.9E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS07580 0ca6dc52288e900228338d0d8e91cfd1 237 SUPERFAMILY SSF52833 101 233 1.3E-19 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS07580 0ca6dc52288e900228338d0d8e91cfd1 237 Pfam PF13098 Thioredoxin-like domain 124 233 1.3E-9 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS07580 0ca6dc52288e900228338d0d8e91cfd1 237 Gene3D G3DSA:3.40.30.10 119 233 1.0E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS08150 ca10b2114b5f73e0c7b8cc6d8a2436e5 112 PANTHER PTHR34039 1 112 3.8E-21 T 23-04-2016 UPTC3659_RS08150 ca10b2114b5f73e0c7b8cc6d8a2436e5 112 PANTHER PTHR34039:SF1 1 112 3.8E-21 T 23-04-2016 UPTC3659_RS08150 ca10b2114b5f73e0c7b8cc6d8a2436e5 112 SUPERFAMILY SSF52980 10 107 3.54E-26 T 23-04-2016 IPR011335 Restriction endonuclease type II-like UPTC3659_RS08150 ca10b2114b5f73e0c7b8cc6d8a2436e5 112 Gene3D G3DSA:3.40.1350.10 12 110 1.2E-27 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 UPTC3659_RS08150 ca10b2114b5f73e0c7b8cc6d8a2436e5 112 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 112 18.679 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 UPTC3659_RS08150 ca10b2114b5f73e0c7b8cc6d8a2436e5 112 Pfam PF02021 Uncharacterised protein family UPF0102 12 99 2.2E-21 T 23-04-2016 IPR003509 Uncharacterised protein family UPF0102 UPTC3659_RS03805 88a67dfd55959539f2ac14ee4bff08df 130 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 75 4.2E-19 T 23-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 UPTC3659_RS03805 88a67dfd55959539f2ac14ee4bff08df 130 Pfam PF02416 mttA/Hcf106 family 1 31 4.5E-5 T 23-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 UPTC3659_RS01865 c9a025a7be943f96ce93d5503fa1e6dd 226 Gene3D G3DSA:1.10.3480.10 2 188 2.9E-16 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone UPTC3659_RS01865 c9a025a7be943f96ce93d5503fa1e6dd 226 SUPERFAMILY SSF89155 2 192 1.02E-33 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone UPTC3659_RS07515 bd00e974fb1047f3637cce88361a56ea 1134 Pfam PF05860 haemagglutination activity domain 44 152 1.3E-14 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS07515 bd00e974fb1047f3637cce88361a56ea 1134 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 81 149 2.2E-15 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS07515 bd00e974fb1047f3637cce88361a56ea 1134 SMART SM00912 41 154 9.7E-21 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS07515 bd00e974fb1047f3637cce88361a56ea 1134 SUPERFAMILY SSF51126 36 253 1.44E-23 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor UPTC3659_RS05110 bd6b119b9c9d4bef437dd104cd1a34e7 248 SMART SM00248 64 96 340.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05110 bd6b119b9c9d4bef437dd104cd1a34e7 248 SMART SM00248 102 131 0.054 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05110 bd6b119b9c9d4bef437dd104cd1a34e7 248 SMART SM00248 141 171 24.0 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05110 bd6b119b9c9d4bef437dd104cd1a34e7 248 Gene3D G3DSA:1.25.40.20 76 197 1.6E-14 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05110 bd6b119b9c9d4bef437dd104cd1a34e7 248 PRINTS PR01415 Ankyrin repeat signature 158 172 4.1E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05110 bd6b119b9c9d4bef437dd104cd1a34e7 248 PRINTS PR01415 Ankyrin repeat signature 103 118 4.1E-5 T 23-04-2016 IPR002110 Ankyrin repeat GO:0005515 UPTC3659_RS05110 bd6b119b9c9d4bef437dd104cd1a34e7 248 PANTHER PTHR24188 80 191 4.4E-12 T 23-04-2016 UPTC3659_RS05110 bd6b119b9c9d4bef437dd104cd1a34e7 248 Pfam PF12796 Ankyrin repeats (3 copies) 78 170 2.3E-7 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS05110 bd6b119b9c9d4bef437dd104cd1a34e7 248 SUPERFAMILY SSF48403 14 188 3.15E-15 T 23-04-2016 IPR020683 Ankyrin repeat-containing domain UPTC3659_RS01030 a5fc2a6c78d111e6c652d49d9b60a3ca 141 Pfam PF00430 ATP synthase B/B' CF(0) 11 104 1.4E-7 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 UPTC3659_RS06525 2d761415737417c2cf22b08725d88e6d 412 Pfam PF11144 Protein of unknown function (DUF2920) 7 404 8.9E-125 T 23-04-2016 IPR022605 Protein of unknown function DUF2920 UPTC3659_RS06525 2d761415737417c2cf22b08725d88e6d 412 Gene3D G3DSA:3.40.50.1820 30 82 5.2E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS06525 2d761415737417c2cf22b08725d88e6d 412 Gene3D G3DSA:3.40.50.1820 288 340 5.2E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS06525 2d761415737417c2cf22b08725d88e6d 412 Gene3D G3DSA:3.40.50.1820 149 256 5.2E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS06525 2d761415737417c2cf22b08725d88e6d 412 SUPERFAMILY SSF53474 262 341 8.11E-10 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS06525 2d761415737417c2cf22b08725d88e6d 412 SUPERFAMILY SSF53474 7 85 8.11E-10 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS06525 2d761415737417c2cf22b08725d88e6d 412 SUPERFAMILY SSF53474 152 225 8.11E-10 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS02030 c0403a4b7ea9490a34fea97df99baba8 214 SUPERFAMILY SSF56784 4 212 6.27E-47 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS02030 c0403a4b7ea9490a34fea97df99baba8 214 Gene3D G3DSA:1.10.150.240 17 73 5.3E-15 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 UPTC3659_RS02030 c0403a4b7ea9490a34fea97df99baba8 214 PANTHER PTHR18901 4 194 1.1E-43 T 23-04-2016 UPTC3659_RS02030 c0403a4b7ea9490a34fea97df99baba8 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 176 2.8E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 UPTC3659_RS02030 c0403a4b7ea9490a34fea97df99baba8 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 182 6.4E-38 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS02030 c0403a4b7ea9490a34fea97df99baba8 214 Gene3D G3DSA:3.40.50.1000 74 196 2.4E-31 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS02030 c0403a4b7ea9490a34fea97df99baba8 214 PANTHER PTHR18901:SF14 4 194 1.1E-43 T 23-04-2016 UPTC3659_RS04295 eea2338b8eadd0b747be7553d5a3c10e 227 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 94 226 1.6E-29 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal UPTC3659_RS04295 eea2338b8eadd0b747be7553d5a3c10e 227 PANTHER PTHR36307 95 225 3.5E-13 T 23-04-2016 UPTC3659_RS04295 eea2338b8eadd0b747be7553d5a3c10e 227 Pfam PF13144 Chaperone for flagella basal body P-ring formation 29 225 3.2E-30 T 23-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 PANTHER PTHR30075:SF2 3 664 1.8E-213 T 23-04-2016 UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 662 21.72 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 662 2.4E-195 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 PANTHER PTHR30075 3 664 1.8E-213 T 23-04-2016 UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 46 58 1.8E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 311 327 1.8E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 4 17 1.8E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 240 255 1.8E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 386 405 1.8E-31 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS03480 6a563b9bacdd4a86b4c9bbb5c2095ce5 664 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 3 534 1.9E-175 T 23-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UPTC3659_RS03905 2875edff5f4908369f9b0f40ce748b8a 575 PANTHER PTHR34597:SF1 107 575 5.4E-29 T 23-04-2016 UPTC3659_RS03905 2875edff5f4908369f9b0f40ce748b8a 575 Gene3D G3DSA:2.40.160.50 203 575 1.1E-32 T 23-04-2016 UPTC3659_RS03905 2875edff5f4908369f9b0f40ce748b8a 575 PANTHER PTHR34597 107 575 5.4E-29 T 23-04-2016 UPTC3659_RS02750 2875edff5f4908369f9b0f40ce748b8a 575 PANTHER PTHR34597:SF1 107 575 5.4E-29 T 23-04-2016 UPTC3659_RS02750 2875edff5f4908369f9b0f40ce748b8a 575 Gene3D G3DSA:2.40.160.50 203 575 1.1E-32 T 23-04-2016 UPTC3659_RS02750 2875edff5f4908369f9b0f40ce748b8a 575 PANTHER PTHR34597 107 575 5.4E-29 T 23-04-2016 UPTC3659_RS04010 2875edff5f4908369f9b0f40ce748b8a 575 PANTHER PTHR34597:SF1 107 575 5.4E-29 T 23-04-2016 UPTC3659_RS04010 2875edff5f4908369f9b0f40ce748b8a 575 Gene3D G3DSA:2.40.160.50 203 575 1.1E-32 T 23-04-2016 UPTC3659_RS04010 2875edff5f4908369f9b0f40ce748b8a 575 PANTHER PTHR34597 107 575 5.4E-29 T 23-04-2016 UPTC3659_RS07610 f0ea24ae485135b6b79bed6a36b45ced 275 SUPERFAMILY SSF109998 21 172 4.71E-25 T 23-04-2016 IPR027304 Trigger factor/SurA domain UPTC3659_RS07610 f0ea24ae485135b6b79bed6a36b45ced 275 Pfam PF09312 SurA N-terminal domain 51 118 1.8E-13 T 23-04-2016 IPR015391 SurA N-terminal UPTC3659_RS03855 36b469bc955036fde2460cc26350e905 203 SUPERFAMILY SSF52540 41 155 5.83E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03855 36b469bc955036fde2460cc26350e905 203 Gene3D G3DSA:3.40.50.300 41 104 1.9E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS03855 36b469bc955036fde2460cc26350e905 203 Pfam PF13177 DNA polymerase III, delta subunit 50 105 7.2E-13 T 23-04-2016 UPTC3659_RS01840 8c9b9dd26ce25296e751c7dbe7b603b9 148 Gene3D G3DSA:3.90.1170.40 1 141 1.1E-31 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS01840 8c9b9dd26ce25296e751c7dbe7b603b9 148 SUPERFAMILY SSF54690 9 140 1.26E-32 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS01840 8c9b9dd26ce25296e751c7dbe7b603b9 148 Pfam PF02391 MoaE protein 19 114 1.1E-13 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 UPTC3659_RS00310 22455968154e174c1a49ea6dd4e86799 252 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 251 9.1E-83 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 UPTC3659_RS00310 22455968154e174c1a49ea6dd4e86799 252 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 243 5.5E-27 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase UPTC3659_RS00310 22455968154e174c1a49ea6dd4e86799 252 PANTHER PTHR22748 1 252 4.8E-97 T 23-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 UPTC3659_RS00310 22455968154e174c1a49ea6dd4e86799 252 SUPERFAMILY SSF56219 1 251 4.71E-73 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase UPTC3659_RS00310 22455968154e174c1a49ea6dd4e86799 252 Gene3D G3DSA:3.60.10.10 1 251 7.5E-86 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase UPTC3659_RS00310 22455968154e174c1a49ea6dd4e86799 252 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 250 6.1E-80 T 23-04-2016 UPTC3659_RS02400 e9053e0e2c28587871902fdc0b94f8b1 401 Gene3D G3DSA:3.40.50.720 1 190 2.7E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02400 e9053e0e2c28587871902fdc0b94f8b1 401 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 141 388 2.2E-36 T 23-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal UPTC3659_RS02400 e9053e0e2c28587871902fdc0b94f8b1 401 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 134 6.7E-31 T 23-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 UPTC3659_RS02400 e9053e0e2c28587871902fdc0b94f8b1 401 SUPERFAMILY SSF51735 1 189 1.73E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain UPTC3659_RS02400 e9053e0e2c28587871902fdc0b94f8b1 401 PANTHER PTHR12286:SF6 1 401 9.6E-151 T 23-04-2016 UPTC3659_RS02400 e9053e0e2c28587871902fdc0b94f8b1 401 PANTHER PTHR12286 1 401 9.6E-151 T 23-04-2016 UPTC3659_RS08940 84736265fcda6d80595dd5d4ce952b23 293 SUPERFAMILY SSF53474 84 227 4.55E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS08940 84736265fcda6d80595dd5d4ce952b23 293 SUPERFAMILY SSF53474 32 51 4.55E-19 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS08940 84736265fcda6d80595dd5d4ce952b23 293 Gene3D G3DSA:3.40.50.1820 34 65 1.4E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS08940 84736265fcda6d80595dd5d4ce952b23 293 Gene3D G3DSA:3.40.50.1820 113 230 1.4E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS08940 84736265fcda6d80595dd5d4ce952b23 293 Pfam PF11187 Protein of unknown function (DUF2974) 100 231 1.2E-7 T 23-04-2016 IPR024499 Protein of unknown function DUF2974 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 SUPERFAMILY SSF51569 8 294 2.72E-90 T 23-04-2016 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 PIRSF PIRSF001365 1 297 7.0E-79 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 PANTHER PTHR12128 1 295 5.2E-111 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 SMART SM01130 5 294 2.4E-125 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 292 1.5E-104 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 Pfam PF00701 Dihydrodipicolinate synthetase family 8 291 3.3E-86 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 292 61.022 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 PANTHER PTHR12128:SF34 1 295 5.2E-111 T 23-04-2016 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 Gene3D G3DSA:3.20.20.70 4 295 1.7E-101 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 23-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 4.4E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 4.4E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 4.4E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 4.4E-34 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 UPTC3659_RS03615 96b8198c3af6fd5c6727cb17bb4036eb 298 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 168 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 UPTC3659_RS02090 c770e5dacc13e3b4e7390aa6d5e40d18 121 Pfam PF10135 Rod binding protein 76 114 1.9E-5 T 23-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal UPTC3659_RS02090 c770e5dacc13e3b4e7390aa6d5e40d18 121 PIRSF PIRSF007248 1 121 2.6E-44 T 23-04-2016 IPR016511 Uncharacterised conserved protein UCP007248 UPTC3659_RS02090 c770e5dacc13e3b4e7390aa6d5e40d18 121 ProDom PD351196 CJ1463 JHP0230 HP0245 45 120 5.0E-26 T 23-04-2016 UPTC3659_RS07540 2b3a4bc6f2ab2b6f7b7f82926bfe879c 228 PRINTS PR01805 VacJ lipoprotein signature 103 120 5.2E-18 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 UPTC3659_RS07540 2b3a4bc6f2ab2b6f7b7f82926bfe879c 228 PRINTS PR01805 VacJ lipoprotein signature 52 68 5.2E-18 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 UPTC3659_RS07540 2b3a4bc6f2ab2b6f7b7f82926bfe879c 228 PRINTS PR01805 VacJ lipoprotein signature 35 48 5.2E-18 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 UPTC3659_RS07540 2b3a4bc6f2ab2b6f7b7f82926bfe879c 228 PRINTS PR01805 VacJ lipoprotein signature 138 155 5.2E-18 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 UPTC3659_RS07540 2b3a4bc6f2ab2b6f7b7f82926bfe879c 228 PANTHER PTHR30035 25 224 2.0E-34 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 UPTC3659_RS07540 2b3a4bc6f2ab2b6f7b7f82926bfe879c 228 PANTHER PTHR30035:SF3 25 224 2.0E-34 T 23-04-2016 UPTC3659_RS07540 2b3a4bc6f2ab2b6f7b7f82926bfe879c 228 Pfam PF04333 MlaA lipoprotein 34 225 2.3E-58 T 23-04-2016 IPR007428 MlaA lipoprotein GO:0016020 UPTC3659_RS07895 a43d8ac607731d0461b039347e7b23be 75 Gene3D G3DSA:1.10.260.40 12 75 2.6E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 UPTC3659_RS07895 a43d8ac607731d0461b039347e7b23be 75 SUPERFAMILY SSF47413 7 74 1.58E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 UPTC3659_RS07895 a43d8ac607731d0461b039347e7b23be 75 SMART SM00530 15 73 0.0052 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 PANTHER PTHR30176:SF3 37 231 8.4E-58 T 23-04-2016 UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 20 212 6.6E-63 T 23-04-2016 IPR004494 MauM/NapG ferredoxin-type protein UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 PANTHER PTHR30176 37 231 8.4E-58 T 23-04-2016 UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 Gene3D G3DSA:3.30.70.20 140 193 1.0E-10 T 23-04-2016 UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 52 63 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 Gene3D G3DSA:3.30.70.20 104 139 2.2E-6 T 23-04-2016 UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 SUPERFAMILY SSF54862 33 206 1.99E-22 T 23-04-2016 UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 Pfam PF12838 4Fe-4S dicluster domain 51 106 1.5E-8 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 Pfam PF12838 4Fe-4S dicluster domain 139 192 1.7E-6 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UPTC3659_RS06180 80bba702a43f1ceab9be891d1d7d9e17 249 Gene3D G3DSA:3.30.70.20 50 103 4.3E-11 T 23-04-2016 UPTC3659_RS05085 e099ebf8afa7e390d995ae3ae28e7974 1180 Pfam PF06761 Intracellular multiplication and human macrophage-killing 516 803 3.3E-26 T 23-04-2016 IPR009612 ImcF-related UPTC3659_RS05085 e099ebf8afa7e390d995ae3ae28e7974 1180 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 19 1154 1.0E-135 T 23-04-2016 IPR017731 Type VI secretion system, IcmF UPTC3659_RS05085 e099ebf8afa7e390d995ae3ae28e7974 1180 SUPERFAMILY SSF52540 216 310 3.86E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05085 e099ebf8afa7e390d995ae3ae28e7974 1180 SUPERFAMILY SSF52540 123 182 3.86E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05085 e099ebf8afa7e390d995ae3ae28e7974 1180 Gene3D G3DSA:3.40.50.300 120 329 7.2E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05085 e099ebf8afa7e390d995ae3ae28e7974 1180 Pfam PF06744 Type VI secretion protein IcmF C-terminal 925 1124 8.8E-38 T 23-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal UPTC3659_RS05085 e099ebf8afa7e390d995ae3ae28e7974 1180 Pfam PF14331 ImcF-related N-terminal domain 214 445 5.5E-41 T 23-04-2016 IPR025743 ImcF-related, N-terminal domain UPTC3659_RS05085 e099ebf8afa7e390d995ae3ae28e7974 1180 PANTHER PTHR36153 217 1177 1.2E-74 T 23-04-2016 UPTC3659_RS05085 e099ebf8afa7e390d995ae3ae28e7974 1180 PANTHER PTHR36153 1 197 1.2E-74 T 23-04-2016 UPTC3659_RS01780 f054e602cfbc83302a07e5aa1f2b213f 242 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 63 215 2.2E-30 T 23-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 UPTC3659_RS04660 27d21940f4d6ce730a9d038cecba6ea8 281 Gene3D G3DSA:3.40.50.970 15 230 3.4E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS04660 27d21940f4d6ce730a9d038cecba6ea8 281 PANTHER PTHR18968:SF89 7 274 2.1E-98 T 23-04-2016 UPTC3659_RS04660 27d21940f4d6ce730a9d038cecba6ea8 281 PANTHER PTHR18968 7 274 2.1E-98 T 23-04-2016 UPTC3659_RS04660 27d21940f4d6ce730a9d038cecba6ea8 281 SUPERFAMILY SSF52518 14 263 2.44E-67 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold UPTC3659_RS04660 27d21940f4d6ce730a9d038cecba6ea8 281 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 51 198 1.6E-34 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UPTC3659_RS05845 eb8d9c177c30e7e54574778060a1df47 321 PANTHER PTHR34388 1 321 4.2E-12 T 23-04-2016 UPTC3659_RS05845 eb8d9c177c30e7e54574778060a1df47 321 SUPERFAMILY SSF52540 3 191 2.34E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS05845 eb8d9c177c30e7e54574778060a1df47 321 Gene3D G3DSA:3.40.50.300 1 121 3.4E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07375 b38acaed06e38048fa7669b40d963c49 259 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 46 251 1.0E-68 T 23-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like UPTC3659_RS07375 b38acaed06e38048fa7669b40d963c49 259 Gene3D G3DSA:3.30.420.10 5 209 1.2E-26 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS07375 b38acaed06e38048fa7669b40d963c49 259 SUPERFAMILY SSF53098 5 219 2.53E-38 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 UPTC3659_RS07945 41853331e46c0391ea5160a7eddb9395 250 Gene3D G3DSA:3.40.190.10 117 247 1.4E-23 T 23-04-2016 UPTC3659_RS07945 41853331e46c0391ea5160a7eddb9395 250 Gene3D G3DSA:3.40.190.10 20 116 5.4E-12 T 23-04-2016 UPTC3659_RS07945 41853331e46c0391ea5160a7eddb9395 250 PANTHER PTHR30368 12 249 2.0E-28 T 23-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 UPTC3659_RS07945 41853331e46c0391ea5160a7eddb9395 250 SUPERFAMILY SSF53850 18 249 5.14E-39 T 23-04-2016 UPTC3659_RS07945 41853331e46c0391ea5160a7eddb9395 250 Pfam PF13531 Bacterial extracellular solute-binding protein 22 249 1.7E-30 T 23-04-2016 UPTC3659_RS00290 638bceb7f48abd2b45c5fd972b03e88e 331 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 1 325 1.4E-105 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS00290 638bceb7f48abd2b45c5fd972b03e88e 331 PANTHER PTHR11647 1 330 2.3E-96 T 23-04-2016 UPTC3659_RS00290 638bceb7f48abd2b45c5fd972b03e88e 331 Gene3D G3DSA:3.20.20.140 2 326 4.9E-97 T 23-04-2016 UPTC3659_RS00290 638bceb7f48abd2b45c5fd972b03e88e 331 PANTHER PTHR11647:SF59 1 330 2.3E-96 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS00290 638bceb7f48abd2b45c5fd972b03e88e 331 PIRSF PIRSF001237 1 331 1.1E-114 T 23-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS00290 638bceb7f48abd2b45c5fd972b03e88e 331 Pfam PF01979 Amidohydrolase family 8 175 1.3E-5 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 UPTC3659_RS00290 638bceb7f48abd2b45c5fd972b03e88e 331 ProSitePatterns PS00483 Dihydroorotase signature 2. 235 246 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS00290 638bceb7f48abd2b45c5fd972b03e88e 331 SUPERFAMILY SSF51556 2 327 1.68E-101 T 23-04-2016 IPR032466 Metal-dependent hydrolase UPTC3659_RS07530 b3646f7400526bffb90e6b895bf43c58 820 SUPERFAMILY SSF82866 583 799 6.28E-37 T 23-04-2016 UPTC3659_RS07530 b3646f7400526bffb90e6b895bf43c58 820 PANTHER PTHR33406 141 799 2.4E-51 T 23-04-2016 UPTC3659_RS07530 b3646f7400526bffb90e6b895bf43c58 820 PANTHER PTHR33406 1 94 2.4E-51 T 23-04-2016 UPTC3659_RS07530 b3646f7400526bffb90e6b895bf43c58 820 Pfam PF03176 MMPL family 578 798 3.7E-14 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 UPTC3659_RS07530 b3646f7400526bffb90e6b895bf43c58 820 Pfam PF03176 MMPL family 191 406 1.9E-14 T 23-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 UPTC3659_RS07530 b3646f7400526bffb90e6b895bf43c58 820 SUPERFAMILY SSF82866 210 408 7.46E-24 T 23-04-2016 UPTC3659_RS07530 b3646f7400526bffb90e6b895bf43c58 820 Gene3D G3DSA:1.20.1640.10 610 801 1.5E-37 T 23-04-2016 UPTC3659_RS07530 b3646f7400526bffb90e6b895bf43c58 820 Gene3D G3DSA:1.20.1640.10 204 410 7.4E-30 T 23-04-2016 UPTC3659_RS09015 c2eedbae2ef68d58d77d9edc4fdc6ff3 302 SUPERFAMILY SSF69349 13 229 3.3E-38 T 23-04-2016 UPTC3659_RS09015 c2eedbae2ef68d58d77d9edc4fdc6ff3 302 PANTHER PTHR32305:SF11 1 146 4.2E-12 T 23-04-2016 UPTC3659_RS09015 c2eedbae2ef68d58d77d9edc4fdc6ff3 302 Gene3D G3DSA:2.40.50.230 1 23 7.6E-5 T 23-04-2016 IPR006531 Gp5 N-terminal UPTC3659_RS09015 c2eedbae2ef68d58d77d9edc4fdc6ff3 302 PANTHER PTHR32305 1 146 4.2E-12 T 23-04-2016 UPTC3659_RS03885 d174d20ed2bee02e3466f8f300b0fcbe 196 SUPERFAMILY SSF47188 1 125 4.58E-29 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS03885 d174d20ed2bee02e3466f8f300b0fcbe 196 Gene3D G3DSA:1.20.120.50 1 125 7.4E-33 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS03885 d174d20ed2bee02e3466f8f300b0fcbe 196 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 3 125 1.8E-33 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS03885 d174d20ed2bee02e3466f8f300b0fcbe 196 PANTHER PTHR37164 1 141 3.5E-22 T 23-04-2016 UPTC3659_RS03885 d174d20ed2bee02e3466f8f300b0fcbe 196 Pfam PF01814 Hemerythrin HHE cation binding domain 13 124 3.0E-12 T 23-04-2016 IPR012312 Haemerythrin-like UPTC3659_RS03885 d174d20ed2bee02e3466f8f300b0fcbe 196 ProSitePatterns PS00550 Hemerythrin family signature. 56 79 - T 23-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 UPTC3659_RS00325 c9025388700e577b953a1e89edc7e1a5 203 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 86 110 2.9E-5 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat UPTC3659_RS00325 c9025388700e577b953a1e89edc7e1a5 203 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 61 85 1.6E-7 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat UPTC3659_RS00325 c9025388700e577b953a1e89edc7e1a5 203 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 17 121 4.1E-31 T 23-04-2016 IPR005046 Protein of unknown function DUF285 UPTC3659_RS04655 dbdd9ba1c8c0c94ffdff31b158d22064 185 Gene3D G3DSA:3.40.920.10 1 180 2.7E-33 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 UPTC3659_RS04655 dbdd9ba1c8c0c94ffdff31b158d22064 185 PANTHER PTHR32154 1 183 1.9E-20 T 23-04-2016 UPTC3659_RS04655 dbdd9ba1c8c0c94ffdff31b158d22064 185 SUPERFAMILY SSF53323 1 181 7.98E-35 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 UPTC3659_RS04655 dbdd9ba1c8c0c94ffdff31b158d22064 185 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 11 176 1.7E-31 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 UPTC3659_RS04655 dbdd9ba1c8c0c94ffdff31b158d22064 185 PANTHER PTHR32154:SF17 1 183 1.9E-20 T 23-04-2016 UPTC3659_RS07835 890b3e376baf3782e0104becc3a90d20 137 Pfam PF01475 Ferric uptake regulator family 11 116 6.8E-27 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 UPTC3659_RS07835 890b3e376baf3782e0104becc3a90d20 137 Gene3D G3DSA:1.10.10.10 2 79 2.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS07835 890b3e376baf3782e0104becc3a90d20 137 PANTHER PTHR33202:SF7 2 116 7.4E-31 T 23-04-2016 UPTC3659_RS07835 890b3e376baf3782e0104becc3a90d20 137 PANTHER PTHR33202 2 116 7.4E-31 T 23-04-2016 UPTC3659_RS07835 890b3e376baf3782e0104becc3a90d20 137 SUPERFAMILY SSF46785 2 123 1.49E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS00330 57db3883916f9973b2413b245315622e 759 SUPERFAMILY SSF51998 125 261 8.55E-157 T 23-04-2016 UPTC3659_RS00330 57db3883916f9973b2413b245315622e 759 SUPERFAMILY SSF51998 307 735 8.55E-157 T 23-04-2016 UPTC3659_RS00330 57db3883916f9973b2413b245315622e 759 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 302 756 1.6E-144 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 UPTC3659_RS00330 57db3883916f9973b2413b245315622e 759 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 120 756 1.4E-209 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 UPTC3659_RS00330 57db3883916f9973b2413b245315622e 759 Pfam PF03477 ATP cone domain 5 91 4.2E-18 T 23-04-2016 IPR005144 ATP-cone domain UPTC3659_RS00330 57db3883916f9973b2413b245315622e 759 Gene3D G3DSA:3.20.70.20 297 736 1.3E-182 T 23-04-2016 UPTC3659_RS00330 57db3883916f9973b2413b245315622e 759 Gene3D G3DSA:3.20.70.20 127 250 1.3E-182 T 23-04-2016 UPTC3659_RS00330 57db3883916f9973b2413b245315622e 759 PANTHER PTHR21075 296 759 3.7E-197 T 23-04-2016 UPTC3659_RS00330 57db3883916f9973b2413b245315622e 759 PANTHER PTHR21075 1 253 3.7E-197 T 23-04-2016 UPTC3659_RS01445 be0b37ca83f7f4167a934ba44059cf64 118 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 1 111 3.8E-18 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 UPTC3659_RS01445 be0b37ca83f7f4167a934ba44059cf64 118 Gene3D G3DSA:3.90.470.20 2 115 9.0E-28 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 UPTC3659_RS01445 be0b37ca83f7f4167a934ba44059cf64 118 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 115 1.0E-23 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 UPTC3659_RS01445 be0b37ca83f7f4167a934ba44059cf64 118 SUPERFAMILY SSF56214 2 114 1.06E-24 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 UPTC3659_RS01445 be0b37ca83f7f4167a934ba44059cf64 118 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 1 115 16.962 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 UPTC3659_RS01445 be0b37ca83f7f4167a934ba44059cf64 118 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 5 84 3.0E-35 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 UPTC3659_RS01445 be0b37ca83f7f4167a934ba44059cf64 118 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 115 2.8E-34 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 SUPERFAMILY SSF82866 314 512 4.19E-43 T 23-04-2016 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 SUPERFAMILY SSF82866 257 271 4.19E-43 T 23-04-2016 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 Pfam PF02355 Protein export membrane protein 338 499 2.1E-17 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 520 41.873 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 Pfam PF07549 SecD/SecF GG Motif 36 54 1.7E-4 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 PANTHER PTHR30081:SF1 16 89 1.9E-130 T 23-04-2016 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 PANTHER PTHR30081:SF1 234 525 1.9E-130 T 23-04-2016 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 PANTHER PTHR30081:SF1 137 198 1.9E-130 T 23-04-2016 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 267 497 2.5E-81 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 PRINTS PR00702 Acriflavin resistance protein family signature 481 504 5.2E-8 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 PRINTS PR00702 Acriflavin resistance protein family signature 353 376 5.2E-8 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 PRINTS PR00702 Acriflavin resistance protein family signature 406 430 5.2E-8 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 Gene3D G3DSA:1.20.1640.10 342 515 4.8E-25 T 23-04-2016 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 PANTHER PTHR30081 16 89 1.9E-130 T 23-04-2016 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 PANTHER PTHR30081 234 525 1.9E-130 T 23-04-2016 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 PANTHER PTHR30081 137 198 1.9E-130 T 23-04-2016 UPTC3659_RS06330 05f0c072c99bc8cab563ed3d7d00d595 526 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 39 503 1.2E-143 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 UPTC3659_RS06070 6c14c552f59bf59fe9a29cb96d3dfee6 81 Pfam PF13083 KH domain 3 76 1.9E-18 T 23-04-2016 UPTC3659_RS06070 6c14c552f59bf59fe9a29cb96d3dfee6 81 Gene3D G3DSA:3.30.300.120 15 68 5.8E-7 T 23-04-2016 UPTC3659_RS06070 6c14c552f59bf59fe9a29cb96d3dfee6 81 SUPERFAMILY SSF54814 9 61 1.57E-6 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 UPTC3659_RS08800 3a414917fa2279c50c506854390c8139 139 SUPERFAMILY SSF160574 19 136 5.62E-35 T 23-04-2016 UPTC3659_RS08800 3a414917fa2279c50c506854390c8139 139 Pfam PF11396 Putative beta-lactamase-inhibitor-like, PepSY-like 53 133 3.3E-18 T 23-04-2016 IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like UPTC3659_RS05475 1fd3a4a0b49af2efa9f51aae6244f024 466 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 465 4.4E-108 T 23-04-2016 IPR010263 Type VI secretion protein, VC_A0114 UPTC3659_RS05475 1fd3a4a0b49af2efa9f51aae6244f024 466 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 465 3.5E-117 T 23-04-2016 IPR010263 Type VI secretion protein, VC_A0114 UPTC3659_RS05475 1fd3a4a0b49af2efa9f51aae6244f024 466 PANTHER PTHR35566:SF1 1 465 3.7E-65 T 23-04-2016 UPTC3659_RS05475 1fd3a4a0b49af2efa9f51aae6244f024 466 PANTHER PTHR35566 1 465 3.7E-65 T 23-04-2016 UPTC3659_RS00775 42267fa96bbf54ca28f91fbfd1a4286b 447 PANTHER PTHR32024:SF1 11 447 6.3E-155 T 23-04-2016 UPTC3659_RS00775 42267fa96bbf54ca28f91fbfd1a4286b 447 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 28 419 1.4E-118 T 23-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 UPTC3659_RS00775 42267fa96bbf54ca28f91fbfd1a4286b 447 PANTHER PTHR32024 11 447 6.3E-155 T 23-04-2016 UPTC3659_RS00775 42267fa96bbf54ca28f91fbfd1a4286b 447 Pfam PF02386 Cation transport protein 31 427 3.9E-64 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 UPTC3659_RS02880 114c939510f0cb8e1923e0dd47522670 132 Gene3D G3DSA:1.10.940.10 1 131 1.1E-37 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 UPTC3659_RS02880 114c939510f0cb8e1923e0dd47522670 132 PANTHER PTHR11078 4 132 3.2E-30 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 UPTC3659_RS02880 114c939510f0cb8e1923e0dd47522670 132 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 4 130 6.8E-37 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 UPTC3659_RS02880 114c939510f0cb8e1923e0dd47522670 132 Pfam PF01029 NusB family 6 128 3.0E-31 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 UPTC3659_RS02880 114c939510f0cb8e1923e0dd47522670 132 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 2 132 20.524 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 UPTC3659_RS02880 114c939510f0cb8e1923e0dd47522670 132 SUPERFAMILY SSF48013 3 130 9.55E-33 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 UPTC3659_RS03205 2c71adac3f4bad139a9d9222ec3e90a6 221 Pfam PF08346 AntA/AntB antirepressor 14 78 2.3E-23 T 23-04-2016 IPR013557 AntA/AntB antirepressor UPTC3659_RS03205 2c71adac3f4bad139a9d9222ec3e90a6 221 PANTHER PTHR36180:SF1 1 164 1.4E-26 T 23-04-2016 UPTC3659_RS03205 2c71adac3f4bad139a9d9222ec3e90a6 221 PANTHER PTHR36180 1 164 1.4E-26 T 23-04-2016 UPTC3659_RS01370 c509a7ce9131aaf7e8f1c2362302330d 334 Gene3D G3DSA:3.30.70.270 197 333 4.0E-9 T 23-04-2016 UPTC3659_RS01370 c509a7ce9131aaf7e8f1c2362302330d 334 Pfam PF00990 Diguanylate cyclase, GGDEF domain 195 333 6.3E-6 T 23-04-2016 IPR000160 GGDEF domain UPTC3659_RS01370 c509a7ce9131aaf7e8f1c2362302330d 334 SUPERFAMILY SSF55073 200 333 6.04E-8 T 23-04-2016 IPR029787 Nucleotide cyclase UPTC3659_RS01995 e1779c66e6be669ddadb607fcf5de623 795 SUPERFAMILY SSF52980 560 726 2.04E-7 T 23-04-2016 IPR011335 Restriction endonuclease type II-like UPTC3659_RS01995 e1779c66e6be669ddadb607fcf5de623 795 SUPERFAMILY SSF52540 233 544 3.51E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01995 e1779c66e6be669ddadb607fcf5de623 795 Pfam PF12705 PD-(D/E)XK nuclease superfamily 559 764 5.2E-20 T 23-04-2016 UPTC3659_RS01995 e1779c66e6be669ddadb607fcf5de623 795 Gene3D G3DSA:3.40.50.300 231 310 1.2E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01995 e1779c66e6be669ddadb607fcf5de623 795 Gene3D G3DSA:3.40.50.300 423 515 1.2E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07280 d80140ac805128b1de03dcbb263dc7eb 385 Pfam PF01551 Peptidase family M23 238 333 2.9E-34 T 23-04-2016 IPR016047 Peptidase M23 UPTC3659_RS07280 d80140ac805128b1de03dcbb263dc7eb 385 SUPERFAMILY SSF51261 88 335 4.39E-65 T 23-04-2016 IPR011055 Duplicated hybrid motif UPTC3659_RS07280 d80140ac805128b1de03dcbb263dc7eb 385 PANTHER PTHR21666 152 335 2.3E-45 T 23-04-2016 UPTC3659_RS07280 d80140ac805128b1de03dcbb263dc7eb 385 Gene3D G3DSA:2.70.70.10 195 337 9.5E-49 T 23-04-2016 UPTC3659_RS00245 9633a8d5c2827cf0a306ebd8810d9f0f 63 PANTHER PTHR33343 1 61 3.1E-15 T 23-04-2016 UPTC3659_RS00245 9633a8d5c2827cf0a306ebd8810d9f0f 63 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 61 4.9E-20 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00245 9633a8d5c2827cf0a306ebd8810d9f0f 63 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00245 9633a8d5c2827cf0a306ebd8810d9f0f 63 Pfam PF01632 Ribosomal protein L35 2 61 3.1E-20 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00245 9633a8d5c2827cf0a306ebd8810d9f0f 63 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.0E-11 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00245 9633a8d5c2827cf0a306ebd8810d9f0f 63 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.0E-11 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00245 9633a8d5c2827cf0a306ebd8810d9f0f 63 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.0E-11 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00245 9633a8d5c2827cf0a306ebd8810d9f0f 63 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.13 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00245 9633a8d5c2827cf0a306ebd8810d9f0f 63 SUPERFAMILY SSF143034 2 62 1.16E-17 T 23-04-2016 UPTC3659_RS01165 fb639c8b00fbcbf9c6fc06313011fc35 459 Pfam PF01551 Peptidase family M23 338 432 1.5E-22 T 23-04-2016 IPR016047 Peptidase M23 UPTC3659_RS01165 fb639c8b00fbcbf9c6fc06313011fc35 459 Gene3D G3DSA:2.70.70.10 294 436 6.6E-33 T 23-04-2016 UPTC3659_RS01165 fb639c8b00fbcbf9c6fc06313011fc35 459 PANTHER PTHR21666 339 459 5.0E-21 T 23-04-2016 UPTC3659_RS01165 fb639c8b00fbcbf9c6fc06313011fc35 459 SUPERFAMILY SSF51261 177 435 5.23E-48 T 23-04-2016 IPR011055 Duplicated hybrid motif UPTC3659_RS01165 fb639c8b00fbcbf9c6fc06313011fc35 459 PANTHER PTHR21666:SF108 339 459 5.0E-21 T 23-04-2016 UPTC3659_RS02125 2a30794f9ead9718aebc86d20df35f62 374 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 189 362 1.1E-12 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS02125 2a30794f9ead9718aebc86d20df35f62 374 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 10 183 2.0E-38 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS02125 2a30794f9ead9718aebc86d20df35f62 374 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 79 92 - T 23-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS02125 2a30794f9ead9718aebc86d20df35f62 374 SUPERFAMILY SSF55120 6 213 2.3E-85 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS02125 2a30794f9ead9718aebc86d20df35f62 374 SUPERFAMILY SSF55120 243 366 2.3E-85 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS02125 2a30794f9ead9718aebc86d20df35f62 374 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 2 366 2.3E-59 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS02125 2a30794f9ead9718aebc86d20df35f62 374 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 7 367 26.547 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS02125 2a30794f9ead9718aebc86d20df35f62 374 PANTHER PTHR13326 28 184 4.5E-36 T 23-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 PANTHER PTHR21342 1 157 8.0E-68 T 23-04-2016 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 1.0E-60 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 PANTHER PTHR21342:SF1 1 157 8.0E-68 T 23-04-2016 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 33.264 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 Pfam PF01467 Cytidylyltransferase-like 6 134 7.7E-22 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.4E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 2.4E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.4E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 2.4E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 2.4E-45 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 Gene3D G3DSA:3.40.50.620 1 157 1.2E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 SUPERFAMILY SSF52374 1 158 2.96E-44 T 23-04-2016 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 8.0E-4 T 23-04-2016 UPTC3659_RS04305 a1beb05487e48e5ca57337073f0950b2 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 63 4.0E-17 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UPTC3659_RS01970 f09c8125bf85874c1ba58e41d7d8145e 67 TIGRFAM TIGR02736 cbb3_Q_epsi: cytochrome c oxidase, cbb3-type, CcoQ subunit 11 64 7.8E-26 T 23-04-2016 IPR014107 Cytochrome c oxidase cbb3-type, CcoQ UPTC3659_RS01970 f09c8125bf85874c1ba58e41d7d8145e 67 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 54 7.2E-16 T 23-04-2016 IPR008621 Cbb3-type cytochrome oxidase component UPTC3659_RS06425 ccb6cc289dc657ae31cd21d64e5d3af1 98 Pfam PF02049 Flagellar hook-basal body complex protein FliE 12 98 3.5E-25 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UPTC3659_RS06425 ccb6cc289dc657ae31cd21d64e5d3af1 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 28 44 3.2E-11 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UPTC3659_RS06425 ccb6cc289dc657ae31cd21d64e5d3af1 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 62 78 3.2E-11 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UPTC3659_RS06425 ccb6cc289dc657ae31cd21d64e5d3af1 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 83 96 3.2E-11 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UPTC3659_RS06425 ccb6cc289dc657ae31cd21d64e5d3af1 98 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 7 98 3.9E-27 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UPTC3659_RS06425 ccb6cc289dc657ae31cd21d64e5d3af1 98 PANTHER PTHR34653 26 98 2.1E-15 T 23-04-2016 UPTC3659_RS06425 ccb6cc289dc657ae31cd21d64e5d3af1 98 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 98 17.6 T 23-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UPTC3659_RS00465 67391fbc23efe92fe892cf8df3c46f49 118 Gene3D G3DSA:3.30.420.100 26 118 5.7E-24 T 23-04-2016 UPTC3659_RS00465 67391fbc23efe92fe892cf8df3c46f49 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 11 118 5.9E-37 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00465 67391fbc23efe92fe892cf8df3c46f49 118 PANTHER PTHR12899 13 118 2.7E-18 T 23-04-2016 UPTC3659_RS00465 67391fbc23efe92fe892cf8df3c46f49 118 SUPERFAMILY SSF53137 10 116 1.94E-38 T 23-04-2016 UPTC3659_RS00465 67391fbc23efe92fe892cf8df3c46f49 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 8 118 23.196 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00465 67391fbc23efe92fe892cf8df3c46f49 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 118 5.5E-36 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS06015 075959a84aa09ca4624ff1f9e4c785f2 303 PANTHER PTHR36838 1 303 8.8E-43 T 23-04-2016 UPTC3659_RS06015 075959a84aa09ca4624ff1f9e4c785f2 303 Pfam PF03547 Membrane transport protein 158 299 9.9E-12 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 UPTC3659_RS06015 075959a84aa09ca4624ff1f9e4c785f2 303 Pfam PF03547 Membrane transport protein 3 128 1.4E-18 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 UPTC3659_RS06015 075959a84aa09ca4624ff1f9e4c785f2 303 PANTHER PTHR36838:SF1 1 303 8.8E-43 T 23-04-2016 UPTC3659_RS03575 6c9aa49118ca839d4bf0a5d5a190b57d 627 SUPERFAMILY SSF53187 403 503 1.41E-50 T 23-04-2016 UPTC3659_RS03575 6c9aa49118ca839d4bf0a5d5a190b57d 627 SUPERFAMILY SSF53187 547 623 1.41E-50 T 23-04-2016 UPTC3659_RS03575 6c9aa49118ca839d4bf0a5d5a190b57d 627 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 406 620 3.6E-50 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 UPTC3659_RS03575 6c9aa49118ca839d4bf0a5d5a190b57d 627 SMART SM00646 465 620 3.3E-51 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 UPTC3659_RS03575 6c9aa49118ca839d4bf0a5d5a190b57d 627 Gene3D G3DSA:3.40.630.40 403 504 8.5E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 UPTC3659_RS03575 6c9aa49118ca839d4bf0a5d5a190b57d 627 Gene3D G3DSA:3.40.630.40 548 623 8.5E-59 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 UPTC3659_RS03575 6c9aa49118ca839d4bf0a5d5a190b57d 627 PANTHER PTHR30404 377 623 4.1E-70 T 23-04-2016 UPTC3659_RS03575 6c9aa49118ca839d4bf0a5d5a190b57d 627 PANTHER PTHR30404:SF0 377 623 4.1E-70 T 23-04-2016 UPTC3659_RS08580 af335983c8a93d884548fc3005f16c68 623 PANTHER PTHR30566 553 620 1.6E-57 T 23-04-2016 UPTC3659_RS08580 af335983c8a93d884548fc3005f16c68 623 PANTHER PTHR30566 241 525 1.6E-57 T 23-04-2016 UPTC3659_RS08580 af335983c8a93d884548fc3005f16c68 623 SUPERFAMILY SSF50182 411 477 8.83E-19 T 23-04-2016 IPR010920 LSM domain UPTC3659_RS08580 af335983c8a93d884548fc3005f16c68 623 Gene3D G3DSA:2.30.30.60 428 476 3.0E-19 T 23-04-2016 UPTC3659_RS08580 af335983c8a93d884548fc3005f16c68 623 SUPERFAMILY SSF82689 551 611 9.81E-11 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 UPTC3659_RS08580 af335983c8a93d884548fc3005f16c68 623 SUPERFAMILY SSF82689 483 513 9.81E-11 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 UPTC3659_RS08580 af335983c8a93d884548fc3005f16c68 623 SUPERFAMILY SSF82861 327 410 1.96E-12 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 UPTC3659_RS08580 af335983c8a93d884548fc3005f16c68 623 Pfam PF00924 Mechanosensitive ion channel 369 601 4.4E-59 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 UPTC3659_RS08580 af335983c8a93d884548fc3005f16c68 623 Gene3D G3DSA:3.30.70.100 483 596 1.2E-6 T 23-04-2016 UPTC3659_RS06785 ec9bdcda0b598d3f9b109ccc72a8ebf1 323 SUPERFAMILY SSF54427 211 322 4.29E-8 T 23-04-2016 IPR032710 NTF2-like domain UPTC3659_RS06785 ec9bdcda0b598d3f9b109ccc72a8ebf1 323 Pfam PF03734 L,D-transpeptidase catalytic domain 66 189 7.7E-12 T 23-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 UPTC3659_RS06785 ec9bdcda0b598d3f9b109ccc72a8ebf1 323 SUPERFAMILY SSF141523 77 188 2.88E-10 T 23-04-2016 UPTC3659_RS06785 ec9bdcda0b598d3f9b109ccc72a8ebf1 323 Gene3D G3DSA:2.40.440.10 77 189 7.7E-7 T 23-04-2016 UPTC3659_RS06785 ec9bdcda0b598d3f9b109ccc72a8ebf1 323 PANTHER PTHR36699 59 315 2.3E-17 T 23-04-2016 UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 PANTHER PTHR10772 1 85 4.6E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 Hamap MF_00580 10 kDa chaperonin [groS]. 2 86 21.636 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 SMART SM00883 2 85 1.5E-42 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 PRINTS PR00297 10kDa chaperonin signature 3 18 1.3E-24 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 PRINTS PR00297 10kDa chaperonin signature 72 85 1.3E-24 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 PRINTS PR00297 10kDa chaperonin signature 51 63 1.3E-24 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 PRINTS PR00297 10kDa chaperonin signature 25 46 1.3E-24 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 Pfam PF00166 Chaperonin 10 Kd subunit 2 85 4.8E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 SUPERFAMILY SSF50129 1 85 1.65E-26 T 23-04-2016 IPR011032 GroES-like UPTC3659_RS06265 8cfbf96fe4abebe7724dbef328b51c0b 86 Gene3D G3DSA:2.30.33.40 1 85 2.1E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UPTC3659_RS03770 c839ca4e8ace16c322b4c2b9bb9b4db0 167 Gene3D G3DSA:2.60.450.10 82 160 5.2E-7 T 23-04-2016 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 SUPERFAMILY SSF53681 1 100 1.77E-31 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 Gene3D G3DSA:3.40.50.1860 120 202 5.3E-24 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 PANTHER PTHR21198 2 246 2.2E-69 T 23-04-2016 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 177 187 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 SUPERFAMILY SSF53681 109 246 3.49E-30 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 TIGRFAM TIGR00067 glut_race: glutamate racemase 4 245 9.5E-68 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 Gene3D G3DSA:3.40.50.1860 2 119 5.3E-44 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 Hamap MF_00258 Glutamate racemase [murI]. 1 246 29.912 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 PANTHER PTHR21198:SF2 2 246 2.2E-69 T 23-04-2016 UPTC3659_RS00485 cb7afd28795f67aec353f6a50629b69a 246 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 211 9.1E-33 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 UPTC3659_RS04025 8b59d58545f9e25e71039351a6962ebd 509 Gene3D G3DSA:2.30.30.60 314 377 1.3E-5 T 23-04-2016 UPTC3659_RS04025 8b59d58545f9e25e71039351a6962ebd 509 Gene3D G3DSA:3.30.70.100 389 484 8.1E-4 T 23-04-2016 UPTC3659_RS04025 8b59d58545f9e25e71039351a6962ebd 509 PANTHER PTHR30566:SF14 1 491 2.6E-19 T 23-04-2016 UPTC3659_RS04025 8b59d58545f9e25e71039351a6962ebd 509 SUPERFAMILY SSF50182 298 378 1.73E-6 T 23-04-2016 IPR010920 LSM domain UPTC3659_RS04025 8b59d58545f9e25e71039351a6962ebd 509 PANTHER PTHR30566 1 491 2.6E-19 T 23-04-2016 UPTC3659_RS04025 8b59d58545f9e25e71039351a6962ebd 509 Pfam PF00924 Mechanosensitive ion channel 254 476 2.7E-32 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 UPTC3659_RS04025 8b59d58545f9e25e71039351a6962ebd 509 SUPERFAMILY SSF82689 386 498 3.01E-6 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 PANTHER PTHR30437 1 161 2.7E-63 T 23-04-2016 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 SUPERFAMILY SSF54534 81 156 3.27E-21 T 23-04-2016 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 4.5E-31 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 1.5E-60 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 Gene3D G3DSA:3.10.50.30 76 157 2.4E-29 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.6E-27 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.066 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 SUPERFAMILY SSF46557 4 78 1.18E-28 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 PIRSF PIRSF006092 1 158 3.0E-51 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 UPTC3659_RS07935 1036bc5a3a55364697ffae71d629e8f7 161 Gene3D G3DSA:1.10.287.180 1 75 7.2E-33 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 UPTC3659_RS01295 d71cc95a65be1f08a860de43937816ee 141 Pfam PF09827 CRISPR associated protein Cas2 7 86 2.1E-17 T 23-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 UPTC3659_RS01295 d71cc95a65be1f08a860de43937816ee 141 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 7 107 6.1E-28 T 23-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 UPTC3659_RS01295 d71cc95a65be1f08a860de43937816ee 141 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 7 106 14.481 T 23-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 UPTC3659_RS01295 d71cc95a65be1f08a860de43937816ee 141 SUPERFAMILY SSF143430 6 88 5.23E-15 T 23-04-2016 UPTC3659_RS08005 2868326d5bab4fec2e8f7d1f6556d1e0 208 Pfam PF04301 Protein of unknown function (DUF452) 8 203 2.6E-29 T 23-04-2016 IPR007398 Protein of unknown function DUF452 UPTC3659_RS08005 2868326d5bab4fec2e8f7d1f6556d1e0 208 SUPERFAMILY SSF53474 47 198 5.68E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS08005 2868326d5bab4fec2e8f7d1f6556d1e0 208 Gene3D G3DSA:3.40.50.1820 55 182 2.3E-5 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold UPTC3659_RS05635 1065d58b946ba5a902d10d65b7a6305d 443 Pfam PF01618 MotA/TolQ/ExbB proton channel family 127 210 1.3E-8 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 UPTC3659_RS08540 d8a8e6444900bca66880b0092d797a26 320 Gene3D G3DSA:1.25.40.10 59 275 1.3E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS08540 d8a8e6444900bca66880b0092d797a26 320 SUPERFAMILY SSF48452 59 160 1.97E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 PANTHER PTHR13370 125 248 1.5E-16 T 23-04-2016 UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 SUPERFAMILY SSF53335 7 37 3.68E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 SUPERFAMILY SSF53335 65 239 3.68E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 PANTHER PTHR13370:SF7 125 248 1.5E-16 T 23-04-2016 UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 199 217 4.7E-16 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 21 35 4.7E-16 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 180 197 4.7E-16 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 222 242 4.7E-16 T 23-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 Pfam PF01555 DNA methylase 23 239 3.7E-22 T 23-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 UPTC3659_RS03225 9e26766ef242dadfa9f3a43517c0a6ae 251 Gene3D G3DSA:3.40.50.150 20 239 1.3E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS02605 36a623f848ab3e7ce8ee793216f95b01 181 Pfam PF08966 Domain of unknown function (DUF1882) 2 74 8.1E-36 T 23-04-2016 IPR015061 Domain of unknown function DUF1882 UPTC3659_RS02605 36a623f848ab3e7ce8ee793216f95b01 181 SUPERFAMILY SSF56747 5 179 1.5E-90 T 23-04-2016 UPTC3659_RS02605 36a623f848ab3e7ce8ee793216f95b01 181 Gene3D G3DSA:3.90.920.20 3 181 3.5E-94 T 23-04-2016 UPTC3659_RS06960 6faa423e28ff4cbd7ec4f078231beae3 371 Pfam PF12704 MacB-like periplasmic core domain 26 193 4.7E-7 T 23-04-2016 IPR025857 MacB-like periplasmic core domain UPTC3659_RS06960 6faa423e28ff4cbd7ec4f078231beae3 371 Pfam PF02687 FtsX-like permease family 250 363 2.4E-15 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 UPTC3659_RS06960 6faa423e28ff4cbd7ec4f078231beae3 371 PANTHER PTHR30489 14 371 2.5E-25 T 23-04-2016 UPTC3659_RS00425 fe771f589bb9c2c5d2927308813050e3 61 Pfam PF00831 Ribosomal L29 protein 5 58 1.8E-16 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00425 fe771f589bb9c2c5d2927308813050e3 61 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 23-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00425 fe771f589bb9c2c5d2927308813050e3 61 SUPERFAMILY SSF46561 1 58 6.67E-15 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00425 fe771f589bb9c2c5d2927308813050e3 61 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 14.422 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00425 fe771f589bb9c2c5d2927308813050e3 61 Gene3D G3DSA:1.10.287.310 1 58 7.1E-18 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00425 fe771f589bb9c2c5d2927308813050e3 61 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 58 7.9E-20 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS08305 566ba1706837cb7829eebcd08ccac2ea 165 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 38 144 1.4E-21 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 UPTC3659_RS08305 566ba1706837cb7829eebcd08ccac2ea 165 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 12 153 3.1E-71 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 UPTC3659_RS08305 566ba1706837cb7829eebcd08ccac2ea 165 Gene3D G3DSA:3.40.50.700 23 154 6.8E-31 T 23-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 UPTC3659_RS08305 566ba1706837cb7829eebcd08ccac2ea 165 PANTHER PTHR11995 8 163 2.0E-88 T 23-04-2016 UPTC3659_RS08305 566ba1706837cb7829eebcd08ccac2ea 165 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 8 151 41.076 T 23-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 UPTC3659_RS08305 566ba1706837cb7829eebcd08ccac2ea 165 SUPERFAMILY SSF56770 11 155 5.49E-62 T 23-04-2016 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 Gene3D G3DSA:2.170.220.10 113 223 1.1E-41 T 23-04-2016 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 Gene3D G3DSA:3.40.50.620 3 110 6.7E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 Gene3D G3DSA:3.40.50.620 224 333 6.7E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 505 627 1.0E-36 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 Pfam PF01588 Putative tRNA binding domain 533 624 1.7E-21 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 Gene3D G3DSA:1.10.730.10 335 502 5.1E-32 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 3 489 1.9E-159 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 9 131 1.5E-14 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 SUPERFAMILY SSF47323 346 502 3.66E-28 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 Pfam PF09334 tRNA synthetases class I (M) 139 357 3.2E-68 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 502 45.678 T 23-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 SUPERFAMILY SSF52374 3 345 4.29E-109 T 23-04-2016 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 Gene3D G3DSA:2.40.50.140 521 627 9.9E-34 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 84 95 1.4E-35 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 36 50 1.4E-35 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 345 356 1.4E-35 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 253 268 1.4E-35 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 4 17 1.4E-35 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 PRINTS PR01041 Methionyl-tRNA synthetase signature 222 233 1.4E-35 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 PANTHER PTHR11946:SF1 3 584 8.8E-237 T 23-04-2016 UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 SUPERFAMILY SSF50249 526 626 4.16E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold UPTC3659_RS04155 887ce13d46a40dcb331264a9d5b65db4 628 PANTHER PTHR11946 3 584 8.8E-237 T 23-04-2016 UPTC3659_RS08970 92d319bb5e91d3f9691e4dd6985f8c42 214 Pfam PF03748 Flagellar basal body-associated protein FliL 21 103 4.9E-6 T 23-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 UPTC3659_RS06835 60ba93099a3741d676d8d43355788d02 453 PANTHER PTHR10283 1 452 4.5E-128 T 23-04-2016 UPTC3659_RS06835 60ba93099a3741d676d8d43355788d02 453 Pfam PF00939 Sodium:sulfate symporter transmembrane region 14 452 2.5E-58 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 UPTC3659_RS06835 60ba93099a3741d676d8d43355788d02 453 PANTHER PTHR10283:SF82 1 452 4.5E-128 T 23-04-2016 UPTC3659_RS06835 60ba93099a3741d676d8d43355788d02 453 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 402 418 - T 23-04-2016 IPR031312 Sodium/sulphate symporter, conserved site UPTC3659_RS06835 60ba93099a3741d676d8d43355788d02 453 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 31 452 3.0E-123 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 UPTC3659_RS07880 ea4a53376ba3499b7b1ee69011b9ddfa 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 349 2.3E-31 T 23-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 UPTC3659_RS07880 ea4a53376ba3499b7b1ee69011b9ddfa 353 PANTHER PTHR33529 1 345 3.0E-16 T 23-04-2016 UPTC3659_RS08745 4e39bb903cc613eeaa950f174766a597 242 PANTHER PTHR13773:SF0 4 242 9.4E-44 T 23-04-2016 UPTC3659_RS08745 4e39bb903cc613eeaa950f174766a597 242 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 203 229 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 UPTC3659_RS08745 4e39bb903cc613eeaa950f174766a597 242 PANTHER PTHR13773 4 242 9.4E-44 T 23-04-2016 UPTC3659_RS08745 4e39bb903cc613eeaa950f174766a597 242 Pfam PF01148 Cytidylyltransferase family 4 241 7.9E-49 T 23-04-2016 UPTC3659_RS07775 bd7e4fa9257eae523ff3b74dc475764e 257 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 23-04-2016 IPR000540 Flagellar motor protein MotA, conserved site UPTC3659_RS07775 bd7e4fa9257eae523ff3b74dc475764e 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 217 2.7E-19 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 UPTC3659_RS07775 bd7e4fa9257eae523ff3b74dc475764e 257 PANTHER PTHR30433 2 245 1.6E-65 T 23-04-2016 UPTC3659_RS02200 e03d75d6878881ce9e9f0534a72b765e 161 Gene3D G3DSA:3.30.2010.10 1 74 3.9E-13 T 23-04-2016 UPTC3659_RS02200 e03d75d6878881ce9e9f0534a72b765e 161 Pfam PF01435 Peptidase family M48 2 157 1.1E-15 T 23-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 UPTC3659_RS02200 e03d75d6878881ce9e9f0534a72b765e 161 PANTHER PTHR10120 1 157 9.5E-17 T 23-04-2016 UPTC3659_RS02200 e03d75d6878881ce9e9f0534a72b765e 161 PANTHER PTHR10120:SF19 1 157 9.5E-17 T 23-04-2016 UPTC3659_RS08295 14238b109239886b63c6282191b105c6 408 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 17 408 46.563 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 UPTC3659_RS08295 14238b109239886b63c6282191b105c6 408 Gene3D G3DSA:1.10.645.10 12 397 1.7E-68 T 23-04-2016 IPR029014 NiFe hydrogenase-like UPTC3659_RS08295 14238b109239886b63c6282191b105c6 408 SUPERFAMILY SSF56762 32 408 6.67E-130 T 23-04-2016 IPR029014 NiFe hydrogenase-like UPTC3659_RS08295 14238b109239886b63c6282191b105c6 408 PANTHER PTHR11993 17 403 1.3E-186 T 23-04-2016 UPTC3659_RS08295 14238b109239886b63c6282191b105c6 408 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 22 408 2.0E-188 T 23-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 UPTC3659_RS08295 14238b109239886b63c6282191b105c6 408 PANTHER PTHR11993:SF28 17 403 1.3E-186 T 23-04-2016 UPTC3659_RS08295 14238b109239886b63c6282191b105c6 408 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 136 408 2.8E-110 T 23-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 UPTC3659_RS02115 daa5c9c5a8f4fc6631e4ae261f7d7293 212 SUPERFAMILY SSF54292 1 98 8.23E-5 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 UPTC3659_RS00515 40ae33c4cb9d12807efcdf7ed271ee43 427 PANTHER PTHR35334 144 427 1.4E-149 T 23-04-2016 UPTC3659_RS00515 40ae33c4cb9d12807efcdf7ed271ee43 427 PANTHER PTHR35334 1 115 1.4E-149 T 23-04-2016 UPTC3659_RS00515 40ae33c4cb9d12807efcdf7ed271ee43 427 PANTHER PTHR35334:SF2 144 427 1.4E-149 T 23-04-2016 UPTC3659_RS00515 40ae33c4cb9d12807efcdf7ed271ee43 427 PANTHER PTHR35334:SF2 1 115 1.4E-149 T 23-04-2016 UPTC3659_RS00515 40ae33c4cb9d12807efcdf7ed271ee43 427 Pfam PF03222 Tryptophan/tyrosine permease family 5 107 1.0E-9 T 23-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 UPTC3659_RS00200 dd64a877d787ca3941d48e7f8e6521dd 192 SUPERFAMILY SSF52540 30 169 1.98E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00200 dd64a877d787ca3941d48e7f8e6521dd 192 Pfam PF01926 50S ribosome-binding GTPase 30 116 5.6E-8 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 UPTC3659_RS00200 dd64a877d787ca3941d48e7f8e6521dd 192 Gene3D G3DSA:3.40.50.300 30 144 8.3E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06095 d30bda8526de17aa8f33bf5cf1c71565 237 PANTHER PTHR39082 1 237 4.0E-25 T 23-04-2016 UPTC3659_RS06095 d30bda8526de17aa8f33bf5cf1c71565 237 Pfam PF02591 C4-type zinc ribbon domain 198 230 3.7E-12 T 23-04-2016 IPR003743 C4-type zinc ribbon domain UPTC3659_RS07155 159e5e7ebb547d3309d5087fc335394a 121 Gene3D G3DSA:3.30.428.10 2 106 1.1E-33 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 UPTC3659_RS07155 159e5e7ebb547d3309d5087fc335394a 121 PANTHER PTHR23089 3 104 6.6E-41 T 23-04-2016 IPR001310 Histidine triad (HIT) protein UPTC3659_RS07155 159e5e7ebb547d3309d5087fc335394a 121 PRINTS PR00332 Histidine triad family signature 27 45 2.7E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein UPTC3659_RS07155 159e5e7ebb547d3309d5087fc335394a 121 PRINTS PR00332 Histidine triad family signature 6 22 2.7E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein UPTC3659_RS07155 159e5e7ebb547d3309d5087fc335394a 121 PRINTS PR00332 Histidine triad family signature 92 102 2.7E-17 T 23-04-2016 IPR001310 Histidine triad (HIT) protein UPTC3659_RS07155 159e5e7ebb547d3309d5087fc335394a 121 Pfam PF01230 HIT domain 13 106 1.4E-28 T 23-04-2016 IPR001310 Histidine triad (HIT) protein UPTC3659_RS07155 159e5e7ebb547d3309d5087fc335394a 121 SUPERFAMILY SSF54197 3 111 2.78E-32 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 UPTC3659_RS07155 159e5e7ebb547d3309d5087fc335394a 121 ProSitePatterns PS00892 HIT domain signature. 85 103 - T 23-04-2016 IPR019808 Histidine triad, conserved site UPTC3659_RS07155 159e5e7ebb547d3309d5087fc335394a 121 PANTHER PTHR23089:SF2 3 104 6.6E-41 T 23-04-2016 UPTC3659_RS01775 48f3bfc695bddee07d596166bfdb3f1c 194 PANTHER PTHR10204:SF36 1 192 8.2E-111 T 23-04-2016 UPTC3659_RS01775 48f3bfc695bddee07d596166bfdb3f1c 194 PANTHER PTHR10204 1 192 8.2E-111 T 23-04-2016 UPTC3659_RS01775 48f3bfc695bddee07d596166bfdb3f1c 194 SUPERFAMILY SSF52218 1 193 4.45E-41 T 23-04-2016 IPR029039 Flavoprotein-like domain UPTC3659_RS01775 48f3bfc695bddee07d596166bfdb3f1c 194 Pfam PF02525 Flavodoxin-like fold 3 188 1.9E-34 T 23-04-2016 IPR003680 Flavodoxin-like fold UPTC3659_RS01775 48f3bfc695bddee07d596166bfdb3f1c 194 Gene3D G3DSA:3.40.50.360 1 193 7.5E-43 T 23-04-2016 IPR029039 Flavoprotein-like domain UPTC3659_RS07395 0ff1c60931a9fdd83dc73b25a9abaebf 366 PANTHER PTHR12526 3 366 3.8E-56 T 23-04-2016 UPTC3659_RS07395 0ff1c60931a9fdd83dc73b25a9abaebf 366 Pfam PF00534 Glycosyl transferases group 1 185 343 8.7E-33 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 UPTC3659_RS07395 0ff1c60931a9fdd83dc73b25a9abaebf 366 Pfam PF13439 Glycosyltransferase Family 4 14 180 1.1E-9 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain UPTC3659_RS07395 0ff1c60931a9fdd83dc73b25a9abaebf 366 SUPERFAMILY SSF53756 5 365 3.86E-65 T 23-04-2016 UPTC3659_RS07395 0ff1c60931a9fdd83dc73b25a9abaebf 366 Gene3D G3DSA:3.40.50.2000 161 343 2.0E-22 T 23-04-2016 UPTC3659_RS08325 0c9984a3193bd5d769535ef9b120c678 258 Gene3D G3DSA:1.10.3720.10 52 253 3.2E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS08325 0c9984a3193bd5d769535ef9b120c678 258 PANTHER PTHR30465:SF2 1 256 3.5E-44 T 23-04-2016 UPTC3659_RS08325 0c9984a3193bd5d769535ef9b120c678 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 247 9.0E-12 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS08325 0c9984a3193bd5d769535ef9b120c678 258 PANTHER PTHR30465 1 256 3.5E-44 T 23-04-2016 UPTC3659_RS08325 0c9984a3193bd5d769535ef9b120c678 258 SUPERFAMILY SSF161098 57 241 1.83E-15 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS07755 bc0ed95d9fba5c249c53a8f0d93c6b81 48 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 45 13.363 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS07755 bc0ed95d9fba5c249c53a8f0d93c6b81 48 SUPERFAMILY SSF57829 1 46 6.1E-11 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 UPTC3659_RS07755 bc0ed95d9fba5c249c53a8f0d93c6b81 48 Pfam PF01783 Ribosomal L32p protein family 2 43 4.1E-11 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS07755 bc0ed95d9fba5c249c53a8f0d93c6b81 48 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 48 1.6E-14 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 UPTC3659_RS08435 3880b9e8dcdba770635ee09243deff81 229 Gene3D G3DSA:3.40.50.1010 1 141 6.0E-25 T 23-04-2016 IPR029060 PIN domain-like UPTC3659_RS08435 3880b9e8dcdba770635ee09243deff81 229 PANTHER PTHR35811:SF1 3 183 7.3E-27 T 23-04-2016 UPTC3659_RS08435 3880b9e8dcdba770635ee09243deff81 229 Pfam PF01936 NYN domain 6 139 8.8E-28 T 23-04-2016 IPR021139 NYN domain, limkain-b1-type UPTC3659_RS08435 3880b9e8dcdba770635ee09243deff81 229 PANTHER PTHR35811 3 183 7.3E-27 T 23-04-2016 UPTC3659_RS07690 b23a701f20bb1d9a6f5f05fd842cdfd9 215 SUPERFAMILY SSF53335 6 112 1.05E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS07690 b23a701f20bb1d9a6f5f05fd842cdfd9 215 Gene3D G3DSA:3.40.50.150 6 111 2.6E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS06630 063dc230a3130620bc2d66809eaa330f 195 Pfam PF01814 Hemerythrin HHE cation binding domain 15 116 2.7E-9 T 23-04-2016 IPR012312 Haemerythrin-like UPTC3659_RS06630 063dc230a3130620bc2d66809eaa330f 195 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 4 125 6.5E-30 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS06630 063dc230a3130620bc2d66809eaa330f 195 SUPERFAMILY SSF47188 3 126 8.89E-30 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS06630 063dc230a3130620bc2d66809eaa330f 195 Gene3D G3DSA:1.20.120.50 2 126 5.0E-31 T 23-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 UPTC3659_RS06630 063dc230a3130620bc2d66809eaa330f 195 ProSitePatterns PS00550 Hemerythrin family signature. 57 80 - T 23-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 UPTC3659_RS06630 063dc230a3130620bc2d66809eaa330f 195 PANTHER PTHR37164 1 142 1.1E-16 T 23-04-2016 UPTC3659_RS02610 5bd1e437d0db033d21d441ecefde51e8 268 Pfam PF05036 Sporulation related domain 193 255 2.0E-6 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 UPTC3659_RS02610 5bd1e437d0db033d21d441ecefde51e8 268 Gene3D G3DSA:3.30.70.1070 196 257 4.6E-4 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 UPTC3659_RS02610 5bd1e437d0db033d21d441ecefde51e8 268 SUPERFAMILY SSF110997 194 263 4.18E-5 T 23-04-2016 IPR007730 Sporulation-related domain GO:0042834 UPTC3659_RS06595 4fd1b0e2646ca5e0f2cbce3510be27d8 388 PANTHER PTHR10283 1 387 6.6E-40 T 23-04-2016 UPTC3659_RS06595 4fd1b0e2646ca5e0f2cbce3510be27d8 388 Pfam PF02040 Arsenical pump membrane protein 2 383 4.6E-54 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UPTC3659_RS06595 4fd1b0e2646ca5e0f2cbce3510be27d8 388 PANTHER PTHR10283:SF21 1 387 6.6E-40 T 23-04-2016 UPTC3659_RS06595 4fd1b0e2646ca5e0f2cbce3510be27d8 388 PRINTS PR00758 Arsenical pump membrane protein signature 239 263 1.5E-36 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UPTC3659_RS06595 4fd1b0e2646ca5e0f2cbce3510be27d8 388 PRINTS PR00758 Arsenical pump membrane protein signature 324 349 1.5E-36 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UPTC3659_RS06595 4fd1b0e2646ca5e0f2cbce3510be27d8 388 PRINTS PR00758 Arsenical pump membrane protein signature 64 88 1.5E-36 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UPTC3659_RS06595 4fd1b0e2646ca5e0f2cbce3510be27d8 388 PRINTS PR00758 Arsenical pump membrane protein signature 283 305 1.5E-36 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UPTC3659_RS06595 4fd1b0e2646ca5e0f2cbce3510be27d8 388 PRINTS PR00758 Arsenical pump membrane protein signature 357 381 1.5E-36 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UPTC3659_RS05700 e166edd842819512c283c5ddbdc12680 230 PANTHER PTHR18895:SF75 2 220 2.5E-32 T 23-04-2016 UPTC3659_RS05700 e166edd842819512c283c5ddbdc12680 230 Pfam PF05175 Methyltransferase small domain 17 114 6.1E-21 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 UPTC3659_RS05700 e166edd842819512c283c5ddbdc12680 230 SUPERFAMILY SSF53335 20 219 1.14E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS05700 e166edd842819512c283c5ddbdc12680 230 Gene3D G3DSA:3.40.50.150 16 221 1.5E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS05700 e166edd842819512c283c5ddbdc12680 230 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 99 105 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 UPTC3659_RS05700 e166edd842819512c283c5ddbdc12680 230 PANTHER PTHR18895 2 220 2.5E-32 T 23-04-2016 UPTC3659_RS00035 cd7d4ce7893fe57626953baab31b5bba 155 Gene3D G3DSA:2.60.260.20 4 68 5.8E-16 T 23-04-2016 UPTC3659_RS00035 cd7d4ce7893fe57626953baab31b5bba 155 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 135 3.7E-5 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 UPTC3659_RS00035 cd7d4ce7893fe57626953baab31b5bba 155 SMART SM00988 1 66 5.8E-6 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal UPTC3659_RS00035 cd7d4ce7893fe57626953baab31b5bba 155 SUPERFAMILY SSF69287 13 67 2.09E-12 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal UPTC3659_RS00035 cd7d4ce7893fe57626953baab31b5bba 155 Pfam PF02814 UreE urease accessory protein, N-terminal domain 13 62 1.1E-11 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal UPTC3659_RS00035 cd7d4ce7893fe57626953baab31b5bba 155 Gene3D G3DSA:3.30.70.790 70 135 2.6E-14 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 UPTC3659_RS00035 cd7d4ce7893fe57626953baab31b5bba 155 SUPERFAMILY SSF69737 71 135 3.92E-13 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 UPTC3659_RS08935 cef56238953fa1302257eed07a8772a4 2048 SUPERFAMILY SSF103515 1746 2048 3.79E-20 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS08935 cef56238953fa1302257eed07a8772a4 2048 SMART SM00869 1772 2037 0.0028 T 23-04-2016 IPR005546 Autotransporter beta-domain UPTC3659_RS08835 01594bfcbc8ae5c0d550b9cd3f6f200e 201 Pfam PF01810 LysE type translocator 11 193 5.4E-35 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 UPTC3659_RS08835 01594bfcbc8ae5c0d550b9cd3f6f200e 201 PANTHER PTHR30086 1 200 5.8E-37 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 UPTC3659_RS08835 01594bfcbc8ae5c0d550b9cd3f6f200e 201 PANTHER PTHR30086:SF1 1 200 5.8E-37 T 23-04-2016 UPTC3659_RS00365 5b15111bea2e67ed07af5162a8fa2005 235 PANTHER PTHR40572 29 234 1.8E-28 T 23-04-2016 UPTC3659_RS00365 5b15111bea2e67ed07af5162a8fa2005 235 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 107 231 7.9E-17 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 UPTC3659_RS00365 5b15111bea2e67ed07af5162a8fa2005 235 SMART SM00047 81 235 0.0033 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 UPTC3659_RS01140 4e3b9ee749c904b213372adf1bca7f24 118 PANTHER PTHR33823 1 118 1.9E-19 T 23-04-2016 UPTC3659_RS01140 4e3b9ee749c904b213372adf1bca7f24 118 SUPERFAMILY SSF109635 1 80 5.49E-10 T 23-04-2016 UPTC3659_RS01140 4e3b9ee749c904b213372adf1bca7f24 118 SUPERFAMILY SSF57716 81 116 1.39E-9 T 23-04-2016 UPTC3659_RS01140 4e3b9ee749c904b213372adf1bca7f24 118 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 84 108 - T 23-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site UPTC3659_RS01140 4e3b9ee749c904b213372adf1bca7f24 118 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 80 113 6.0E-9 T 23-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 UPTC3659_RS08050 757fb0f86ac4a4608398acd2f2e3f8c7 140 SUPERFAMILY SSF55821 18 107 1.07E-7 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain UPTC3659_RS08050 757fb0f86ac4a4608398acd2f2e3f8c7 140 Gene3D G3DSA:3.90.870.10 18 102 7.7E-6 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain UPTC3659_RS05540 acd0cd2814958ed6847ce2893cd3b9d4 290 PANTHER PTHR23088:SF11 1 287 7.8E-118 T 23-04-2016 UPTC3659_RS05540 acd0cd2814958ed6847ce2893cd3b9d4 290 Gene3D G3DSA:3.60.110.10 1 284 5.4E-99 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 UPTC3659_RS05540 acd0cd2814958ed6847ce2893cd3b9d4 290 PANTHER PTHR23088 1 287 7.8E-118 T 23-04-2016 UPTC3659_RS05540 acd0cd2814958ed6847ce2893cd3b9d4 290 SUPERFAMILY SSF56317 1 286 4.32E-80 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 UPTC3659_RS05540 acd0cd2814958ed6847ce2893cd3b9d4 290 Pfam PF00795 Carbon-nitrogen hydrolase 2 268 9.5E-53 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 UPTC3659_RS07550 7505ed3db5d609dbdd592c0bb830c2dc 129 SUPERFAMILY SSF50331 29 124 5.89E-10 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal UPTC3659_RS06155 b09d3240c8b797828f239d1ec53c0fa6 390 SUPERFAMILY SSF103473 6 385 6.02E-32 T 23-04-2016 IPR020846 Major facilitator superfamily domain UPTC3659_RS06155 b09d3240c8b797828f239d1ec53c0fa6 390 Pfam PF07690 Major Facilitator Superfamily 30 345 1.9E-15 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UPTC3659_RS06155 b09d3240c8b797828f239d1ec53c0fa6 390 PANTHER PTHR23523 15 383 4.0E-73 T 23-04-2016 UPTC3659_RS06155 b09d3240c8b797828f239d1ec53c0fa6 390 PANTHER PTHR23523:SF2 15 383 4.0E-73 T 23-04-2016 UPTC3659_RS06155 b09d3240c8b797828f239d1ec53c0fa6 390 Gene3D G3DSA:1.20.1250.20 206 385 5.5E-8 T 23-04-2016 UPTC3659_RS06155 b09d3240c8b797828f239d1ec53c0fa6 390 Gene3D G3DSA:1.20.1250.20 26 186 9.0E-10 T 23-04-2016 UPTC3659_RS04165 24d6003d2bbe65bde908223b3f2c4012 247 Pfam PF13531 Bacterial extracellular solute-binding protein 20 244 2.8E-24 T 23-04-2016 UPTC3659_RS04165 24d6003d2bbe65bde908223b3f2c4012 247 SUPERFAMILY SSF53850 17 244 4.56E-36 T 23-04-2016 UPTC3659_RS04165 24d6003d2bbe65bde908223b3f2c4012 247 Gene3D G3DSA:3.40.190.10 112 242 1.4E-23 T 23-04-2016 UPTC3659_RS04165 24d6003d2bbe65bde908223b3f2c4012 247 Gene3D G3DSA:3.40.190.10 19 111 5.7E-8 T 23-04-2016 UPTC3659_RS04410 afca77e20743c67aec8b8d8943ae9207 114 Gene3D G3DSA:3.30.160.170 21 110 1.6E-22 T 23-04-2016 IPR005186 FlaG protein UPTC3659_RS04410 afca77e20743c67aec8b8d8943ae9207 114 SUPERFAMILY SSF160214 19 113 2.88E-23 T 23-04-2016 IPR005186 FlaG protein UPTC3659_RS04410 afca77e20743c67aec8b8d8943ae9207 114 Pfam PF03646 FlaG protein 22 112 1.8E-22 T 23-04-2016 IPR005186 FlaG protein UPTC3659_RS05980 5913d76c67a7bb32b184bff13704f807 222 Pfam PF01255 Putative undecaprenyl diphosphate synthase 10 221 4.7E-70 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 UPTC3659_RS05980 5913d76c67a7bb32b184bff13704f807 222 SUPERFAMILY SSF64005 5 217 3.66E-66 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 UPTC3659_RS05980 5913d76c67a7bb32b184bff13704f807 222 Gene3D G3DSA:3.40.1180.10 5 222 4.9E-74 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 UPTC3659_RS05980 5913d76c67a7bb32b184bff13704f807 222 PANTHER PTHR10291 5 222 5.4E-84 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 UPTC3659_RS05980 5913d76c67a7bb32b184bff13704f807 222 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 3 222 33.58 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 UPTC3659_RS05980 5913d76c67a7bb32b184bff13704f807 222 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 5 221 1.5E-70 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 UPTC3659_RS03545 4f92e5d5e9bb0ca4e1b11098c30e4a40 391 SUPERFAMILY SSF51261 172 389 2.2E-20 T 23-04-2016 IPR011055 Duplicated hybrid motif UPTC3659_RS03545 4f92e5d5e9bb0ca4e1b11098c30e4a40 391 Gene3D G3DSA:2.70.70.10 248 391 1.1E-19 T 23-04-2016 UPTC3659_RS03545 4f92e5d5e9bb0ca4e1b11098c30e4a40 391 Pfam PF01551 Peptidase family M23 307 376 4.7E-13 T 23-04-2016 IPR016047 Peptidase M23 UPTC3659_RS02275 60871725da0273a52905ac8b64562b63 385 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 39 177 4.1E-6 T 23-04-2016 UPTC3659_RS07335 ea7bb37dadfa3a3be3a75b872fa08e11 306 PANTHER PTHR22916 1 294 2.3E-34 T 23-04-2016 UPTC3659_RS07335 ea7bb37dadfa3a3be3a75b872fa08e11 306 SUPERFAMILY SSF53448 4 226 1.38E-49 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07335 ea7bb37dadfa3a3be3a75b872fa08e11 306 Gene3D G3DSA:3.90.550.10 2 195 4.4E-48 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases UPTC3659_RS07335 ea7bb37dadfa3a3be3a75b872fa08e11 306 Pfam PF00535 Glycosyl transferase family 2 5 149 1.1E-31 T 23-04-2016 IPR001173 Glycosyltransferase 2-like UPTC3659_RS02815 3faf0304e688067c0d788f4170bacf50 168 PANTHER PTHR31721 1 165 5.1E-24 T 23-04-2016 UPTC3659_RS02815 3faf0304e688067c0d788f4170bacf50 168 PIRSF PIRSF026509 1 168 1.9E-46 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 UPTC3659_RS02815 3faf0304e688067c0d788f4170bacf50 168 Pfam PF03350 Uncharacterized protein family, UPF0114 10 134 2.7E-33 T 23-04-2016 IPR005134 Uncharacterised protein family UPF0114 UPTC3659_RS08855 2b43ebb3f8dd4d4b9cb08f4e24cc978e 365 SUPERFAMILY SSF111369 48 285 4.05E-49 T 23-04-2016 UPTC3659_RS08855 2b43ebb3f8dd4d4b9cb08f4e24cc978e 365 PANTHER PTHR30158 5 362 1.7E-75 T 23-04-2016 UPTC3659_RS08855 2b43ebb3f8dd4d4b9cb08f4e24cc978e 365 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 361 3.1E-86 T 23-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 UPTC3659_RS08855 2b43ebb3f8dd4d4b9cb08f4e24cc978e 365 Gene3D G3DSA:2.40.50.100 167 197 7.0E-17 T 23-04-2016 UPTC3659_RS08855 2b43ebb3f8dd4d4b9cb08f4e24cc978e 365 Gene3D G3DSA:2.40.50.100 60 92 7.0E-17 T 23-04-2016 UPTC3659_RS08855 2b43ebb3f8dd4d4b9cb08f4e24cc978e 365 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 281 2.6E-12 T 23-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain UPTC3659_RS07870 06bc7f5b6ba56a992bda8e89b7e57443 253 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 3 224 4.8E-46 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA UPTC3659_RS07870 06bc7f5b6ba56a992bda8e89b7e57443 253 PANTHER PTHR19288:SF3 1 237 2.0E-28 T 23-04-2016 UPTC3659_RS07870 06bc7f5b6ba56a992bda8e89b7e57443 253 Gene3D G3DSA:3.40.50.1000 167 247 1.1E-22 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS07870 06bc7f5b6ba56a992bda8e89b7e57443 253 Gene3D G3DSA:3.40.50.1000 2 72 1.1E-22 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS07870 06bc7f5b6ba56a992bda8e89b7e57443 253 Gene3D G3DSA:3.40.50.10410 73 166 4.5E-14 T 23-04-2016 IPR023215 Nitrophenylphosphatase-like domain UPTC3659_RS07870 06bc7f5b6ba56a992bda8e89b7e57443 253 Pfam PF13344 Haloacid dehalogenase-like hydrolase 3 98 7.9E-16 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA UPTC3659_RS07870 06bc7f5b6ba56a992bda8e89b7e57443 253 Pfam PF13242 HAD-hyrolase-like 169 246 5.5E-13 T 23-04-2016 UPTC3659_RS07870 06bc7f5b6ba56a992bda8e89b7e57443 253 SUPERFAMILY SSF56784 2 245 5.61E-37 T 23-04-2016 IPR023214 HAD-like domain UPTC3659_RS07870 06bc7f5b6ba56a992bda8e89b7e57443 253 PANTHER PTHR19288 1 237 2.0E-28 T 23-04-2016 UPTC3659_RS08550 cb4e167d053b2bc2874f5b84d13b68ce 327 Gene3D G3DSA:3.40.50.620 1 192 1.3E-33 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UPTC3659_RS08550 cb4e167d053b2bc2874f5b84d13b68ce 327 SUPERFAMILY SSF52402 1 232 1.15E-26 T 23-04-2016 UPTC3659_RS08550 cb4e167d053b2bc2874f5b84d13b68ce 327 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 2 144 2.7E-6 T 23-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 UPTC3659_RS08550 cb4e167d053b2bc2874f5b84d13b68ce 327 PANTHER PTHR11933 1 244 1.2E-92 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 UPTC3659_RS08550 cb4e167d053b2bc2874f5b84d13b68ce 327 PANTHER PTHR11933:SF6 1 244 1.2E-92 T 23-04-2016 UPTC3659_RS03850 c7180a9c0c8cf1531c26b149af7f6586 178 Pfam PF12163 DNA replication regulator 4 178 3.5E-65 T 23-04-2016 IPR021011 DNA replication regulator, HobA UPTC3659_RS08720 31ffe964510286b75287b72792da83ed 575 PANTHER PTHR34597:SF1 107 575 9.8E-29 T 23-04-2016 UPTC3659_RS08720 31ffe964510286b75287b72792da83ed 575 PANTHER PTHR34597 107 575 9.8E-29 T 23-04-2016 UPTC3659_RS08720 31ffe964510286b75287b72792da83ed 575 Gene3D G3DSA:2.40.160.50 203 575 5.7E-33 T 23-04-2016 UPTC3659_RS00140 1f05666744e0530ae4499b4db981cf56 300 PANTHER PTHR11079:SF73 25 288 8.2E-46 T 23-04-2016 UPTC3659_RS00140 1f05666744e0530ae4499b4db981cf56 300 Pfam PF00849 RNA pseudouridylate synthase 78 225 3.0E-27 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS00140 1f05666744e0530ae4499b4db981cf56 300 PANTHER PTHR11079 25 288 8.2E-46 T 23-04-2016 UPTC3659_RS00140 1f05666744e0530ae4499b4db981cf56 300 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 115 129 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS00140 1f05666744e0530ae4499b4db981cf56 300 SUPERFAMILY SSF55120 66 278 4.86E-52 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UPTC3659_RS06165 45eaaf63e1727ecc5ea38e37a75e4936 308 Gene3D G3DSA:2.130.10.10 32 62 5.2E-20 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 UPTC3659_RS06165 45eaaf63e1727ecc5ea38e37a75e4936 308 Gene3D G3DSA:2.130.10.10 94 306 5.2E-20 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 UPTC3659_RS06165 45eaaf63e1727ecc5ea38e37a75e4936 308 SUPERFAMILY SSF50978 63 305 3.33E-25 T 23-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 UPTC3659_RS08415 0392e0b4136115f25b93ff0ff947de48 240 PANTHER PTHR30060 1 239 4.7E-98 T 23-04-2016 UPTC3659_RS08415 0392e0b4136115f25b93ff0ff947de48 240 Pfam PF03741 Integral membrane protein TerC family 15 204 4.9E-52 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 UPTC3659_RS08415 0392e0b4136115f25b93ff0ff947de48 240 PANTHER PTHR30060:SF1 1 239 4.7E-98 T 23-04-2016 UPTC3659_RS03315 593f0135d8ac0a7be6c0cc07a21abe43 128 SUPERFAMILY SSF103084 16 94 1.44E-5 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 UPTC3659_RS03315 593f0135d8ac0a7be6c0cc07a21abe43 128 Gene3D G3DSA:3.30.1330.70 3 89 2.1E-6 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 UPTC3659_RS03485 9e78ef6d00b700e6b7967228c305892b 268 Gene3D G3DSA:2.70.70.10 117 263 1.2E-46 T 23-04-2016 UPTC3659_RS03485 9e78ef6d00b700e6b7967228c305892b 268 SUPERFAMILY SSF51261 36 262 1.83E-56 T 23-04-2016 IPR011055 Duplicated hybrid motif UPTC3659_RS03485 9e78ef6d00b700e6b7967228c305892b 268 Pfam PF01551 Peptidase family M23 164 258 1.4E-30 T 23-04-2016 IPR016047 Peptidase M23 UPTC3659_RS03485 9e78ef6d00b700e6b7967228c305892b 268 PANTHER PTHR21666 139 262 1.8E-41 T 23-04-2016 UPTC3659_RS01225 6a46d1d3d6107de1b7b75c44d1fc68c7 407 Gene3D G3DSA:3.20.20.140 61 375 6.7E-50 T 23-04-2016 UPTC3659_RS01225 6a46d1d3d6107de1b7b75c44d1fc68c7 407 PANTHER PTHR11271 3 370 1.6E-31 T 23-04-2016 UPTC3659_RS01225 6a46d1d3d6107de1b7b75c44d1fc68c7 407 Pfam PF01979 Amidohydrolase family 57 404 1.2E-52 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 UPTC3659_RS01225 6a46d1d3d6107de1b7b75c44d1fc68c7 407 SUPERFAMILY SSF51338 3 72 9.25E-7 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 UPTC3659_RS01225 6a46d1d3d6107de1b7b75c44d1fc68c7 407 SUPERFAMILY SSF51556 59 358 4.4E-53 T 23-04-2016 IPR032466 Metal-dependent hydrolase UPTC3659_RS01225 6a46d1d3d6107de1b7b75c44d1fc68c7 407 PANTHER PTHR11271:SF7 3 370 1.6E-31 T 23-04-2016 UPTC3659_RS05480 a5311ad80d5cd8e223933678f5a48169 146 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 127 1.1E-15 T 23-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN UPTC3659_RS05480 a5311ad80d5cd8e223933678f5a48169 146 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 19 137 3.9E-15 T 23-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN UPTC3659_RS01510 c2b3a8d110c52bee5a4c58a219b9201e 75 SUPERFAMILY SSF50037 3 72 2.06E-11 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal UPTC3659_RS01510 c2b3a8d110c52bee5a4c58a219b9201e 75 SMART SM00899 1 73 1.6E-11 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 UPTC3659_RS01510 c2b3a8d110c52bee5a4c58a219b9201e 75 Pfam PF04023 FeoA domain 1 72 9.1E-13 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 UPTC3659_RS07950 063925e1e52f027b0ccb0dd623418872 191 SUPERFAMILY SSF50370 22 190 4.6E-38 T 23-04-2016 IPR000772 Ricin B, lectin domain UPTC3659_RS07950 063925e1e52f027b0ccb0dd623418872 191 Gene3D G3DSA:2.80.10.50 26 190 5.7E-28 T 23-04-2016 UPTC3659_RS07950 063925e1e52f027b0ccb0dd623418872 191 Pfam PF03498 Cytolethal distending toxin A/C domain 31 189 7.0E-35 T 23-04-2016 IPR003558 Cytolethal distending toxin A/C GO:0009405 UPTC3659_RS00295 78ee57b9b44c009ea1c0189bf36bf723 76 Pfam PF13730 Helix-turn-helix domain 20 63 5.4E-6 T 23-04-2016 UPTC3659_RS00295 78ee57b9b44c009ea1c0189bf36bf723 76 Gene3D G3DSA:1.10.10.10 16 75 1.9E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS00295 78ee57b9b44c009ea1c0189bf36bf723 76 SUPERFAMILY SSF46785 15 73 1.84E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01660 7cf3b151ca490596836e47c20a9f66cc 405 SUPERFAMILY SSF52540 103 187 6.54E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01660 7cf3b151ca490596836e47c20a9f66cc 405 SUPERFAMILY SSF52540 4 36 6.54E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS01660 7cf3b151ca490596836e47c20a9f66cc 405 Gene3D G3DSA:3.40.50.300 6 182 8.9E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06870 1667622d3f33c3296ea5693b3acfdb46 197 PANTHER PTHR30086 1 196 1.1E-23 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 UPTC3659_RS06870 1667622d3f33c3296ea5693b3acfdb46 197 PANTHER PTHR30086:SF6 1 196 1.1E-23 T 23-04-2016 UPTC3659_RS06870 1667622d3f33c3296ea5693b3acfdb46 197 Pfam PF01810 LysE type translocator 15 193 5.1E-28 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 UPTC3659_RS05470 a61d6ccaa5d5161065cdad5461e449a7 256 Pfam PF09850 Type VI secretion system protein DotU 27 234 7.8E-40 T 23-04-2016 IPR017732 Type IV / VI secretion system, DotU UPTC3659_RS05470 a61d6ccaa5d5161065cdad5461e449a7 256 PANTHER PTHR38033:SF1 13 251 3.1E-19 T 23-04-2016 UPTC3659_RS05470 a61d6ccaa5d5161065cdad5461e449a7 256 PANTHER PTHR38033 13 251 3.1E-19 T 23-04-2016 UPTC3659_RS05470 a61d6ccaa5d5161065cdad5461e449a7 256 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 24 234 1.0E-40 T 23-04-2016 IPR017732 Type IV / VI secretion system, DotU UPTC3659_RS08595 acbce6cb0c5232d45e79cbf8c65fee46 114 PRINTS PR01651 Protein-export SecG membrane protein signature 1 20 2.1E-6 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UPTC3659_RS08595 acbce6cb0c5232d45e79cbf8c65fee46 114 PRINTS PR01651 Protein-export SecG membrane protein signature 52 74 2.1E-6 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UPTC3659_RS08595 acbce6cb0c5232d45e79cbf8c65fee46 114 PRINTS PR01651 Protein-export SecG membrane protein signature 36 52 2.1E-6 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UPTC3659_RS08595 acbce6cb0c5232d45e79cbf8c65fee46 114 Pfam PF03840 Preprotein translocase SecG subunit 4 71 3.5E-14 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UPTC3659_RS08595 acbce6cb0c5232d45e79cbf8c65fee46 114 PANTHER PTHR34182 2 110 1.4E-12 T 23-04-2016 UPTC3659_RS08595 acbce6cb0c5232d45e79cbf8c65fee46 114 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 71 4.3E-18 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UPTC3659_RS01080 6cd1ba8487bcee56bccbaefb7c9da3a5 399 Gene3D G3DSA:2.130.10.10 140 382 1.2E-35 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 UPTC3659_RS01080 6cd1ba8487bcee56bccbaefb7c9da3a5 399 SUPERFAMILY SSF69304 141 399 3.66E-33 T 23-04-2016 UPTC3659_RS01080 6cd1ba8487bcee56bccbaefb7c9da3a5 399 Pfam PF07676 WD40-like Beta Propeller Repeat 252 288 0.0018 T 23-04-2016 IPR011659 WD40-like Beta Propeller UPTC3659_RS02105 a6c02ba4e1470bde34de3f9ced96f537 131 Gene3D G3DSA:1.20.120.230 60 122 6.6E-4 T 23-04-2016 UPTC3659_RS06790 68ef4284a196354b4af9b18bdf9982cc 139 Pfam PF04314 Protein of unknown function (DUF461) 21 128 1.4E-31 T 23-04-2016 IPR007410 DR1885-like metal-binding protein UPTC3659_RS06790 68ef4284a196354b4af9b18bdf9982cc 139 PANTHER PTHR36302 12 130 1.2E-22 T 23-04-2016 UPTC3659_RS06790 68ef4284a196354b4af9b18bdf9982cc 139 SUPERFAMILY SSF110087 4 129 7.06E-39 T 23-04-2016 IPR007410 DR1885-like metal-binding protein UPTC3659_RS06790 68ef4284a196354b4af9b18bdf9982cc 139 PANTHER PTHR36302:SF1 12 130 1.2E-22 T 23-04-2016 UPTC3659_RS01860 97a5a0f7ee40e1fd07e034ca63687ce9 309 PANTHER PTHR30074 44 309 7.7E-22 T 23-04-2016 UPTC3659_RS01860 97a5a0f7ee40e1fd07e034ca63687ce9 309 Gene3D G3DSA:1.20.950.20 84 298 3.6E-55 T 23-04-2016 UPTC3659_RS01860 97a5a0f7ee40e1fd07e034ca63687ce9 309 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 88 293 3.9E-80 T 23-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 UPTC3659_RS01860 97a5a0f7ee40e1fd07e034ca63687ce9 309 SUPERFAMILY SSF81342 85 299 1.73E-42 T 23-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 UPTC3659_RS01860 97a5a0f7ee40e1fd07e034ca63687ce9 309 Pfam PF01292 Prokaryotic cytochrome b561 92 273 1.3E-21 T 23-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 UPTC3659_RS01860 97a5a0f7ee40e1fd07e034ca63687ce9 309 PANTHER PTHR30074:SF2 44 309 7.7E-22 T 23-04-2016 UPTC3659_RS00395 3fbb0838e7941ec26b8b0aaa7030b2ca 93 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 13.437 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00395 3fbb0838e7941ec26b8b0aaa7030b2ca 93 Pfam PF00276 Ribosomal protein L23 8 88 2.3E-17 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS00395 3fbb0838e7941ec26b8b0aaa7030b2ca 93 SUPERFAMILY SSF54189 7 88 2.66E-20 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 UPTC3659_RS00395 3fbb0838e7941ec26b8b0aaa7030b2ca 93 Gene3D G3DSA:3.30.70.330 7 90 2.3E-19 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 UPTC3659_RS02155 9aff59a96b25d094b6c626f9d22c0ce4 230 SUPERFAMILY SSF101386 2 228 2.49E-73 T 23-04-2016 UPTC3659_RS02155 9aff59a96b25d094b6c626f9d22c0ce4 230 Pfam PF08761 dUTPase 7 187 1.3E-34 T 23-04-2016 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 UPTC3659_RS02085 e2886ae38a981dc39aaa37da1f995000 68 SUPERFAMILY SSF101498 20 66 3.66E-5 T 23-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 UPTC3659_RS01815 77d23a8e1db55a31aeede48bb6880f71 206 SUPERFAMILY SSF116734 52 204 2.62E-21 T 23-04-2016 UPTC3659_RS01815 77d23a8e1db55a31aeede48bb6880f71 206 Pfam PF01420 Type I restriction modification DNA specificity domain 52 201 4.7E-10 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 UPTC3659_RS01170 2e9581822f1c70f74530a1a87f862304 294 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 285 3.5E-111 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 UPTC3659_RS01170 2e9581822f1c70f74530a1a87f862304 294 SUPERFAMILY SSF54211 130 273 7.21E-49 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS01170 2e9581822f1c70f74530a1a87f862304 294 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 3 270 3.6E-99 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 UPTC3659_RS01170 2e9581822f1c70f74530a1a87f862304 294 Gene3D G3DSA:3.30.230.20 2 120 4.3E-39 T 23-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 UPTC3659_RS01170 2e9581822f1c70f74530a1a87f862304 294 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 1 275 45.017 T 23-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 UPTC3659_RS01170 2e9581822f1c70f74530a1a87f862304 294 SUPERFAMILY SSF54211 1 120 5.46E-36 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS01170 2e9581822f1c70f74530a1a87f862304 294 PANTHER PTHR33694:SF1 1 284 6.1E-105 T 23-04-2016 UPTC3659_RS01170 2e9581822f1c70f74530a1a87f862304 294 PANTHER PTHR33694 1 284 6.1E-105 T 23-04-2016 UPTC3659_RS01170 2e9581822f1c70f74530a1a87f862304 294 Gene3D G3DSA:3.30.1700.10 126 277 4.2E-56 T 23-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 UPTC3659_RS09055 936f5a94d15aab734ff2515a03f0ab6c 337 PANTHER PTHR30435:SF15 43 139 2.3E-17 T 23-04-2016 UPTC3659_RS09055 936f5a94d15aab734ff2515a03f0ab6c 337 PANTHER PTHR30435:SF15 234 290 2.3E-17 T 23-04-2016 UPTC3659_RS09055 936f5a94d15aab734ff2515a03f0ab6c 337 Pfam PF03963 Flagellar hook capping protein - N-terminal region 44 95 1.5E-17 T 23-04-2016 IPR005648 Flagellar hook capping protein UPTC3659_RS09055 936f5a94d15aab734ff2515a03f0ab6c 337 Pfam PF13860 FlgD Ig-like domain 231 291 5.4E-14 T 23-04-2016 IPR025965 FlgD Ig-like domain UPTC3659_RS09055 936f5a94d15aab734ff2515a03f0ab6c 337 PANTHER PTHR30435 43 139 2.3E-17 T 23-04-2016 UPTC3659_RS09055 936f5a94d15aab734ff2515a03f0ab6c 337 PANTHER PTHR30435 234 290 2.3E-17 T 23-04-2016 UPTC3659_RS06760 bc7253bde3e25d5d140e8ce35ce4f8dc 161 Hamap MF_02110 UPF0763 protein . 11 157 26.74 T 23-04-2016 IPR019724 Uncharacterised protein family UPF0763 UPTC3659_RS06760 bc7253bde3e25d5d140e8ce35ce4f8dc 161 Pfam PF10788 Protein of unknown function (DUF2603) 15 149 2.7E-41 T 23-04-2016 IPR019724 Uncharacterised protein family UPF0763 UPTC3659_RS07660 044d5eb49c882b7f3181aae2e45355c4 262 SUPERFAMILY SSF110710 2 257 8.89E-60 T 23-04-2016 UPTC3659_RS07660 044d5eb49c882b7f3181aae2e45355c4 262 PANTHER PTHR11104 1 170 1.0E-12 T 23-04-2016 UPTC3659_RS07660 044d5eb49c882b7f3181aae2e45355c4 262 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 34 250 1.3E-35 T 23-04-2016 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 UPTC3659_RS05125 244ff3b0c76dfbc3e28b71c3a799f36d 227 Pfam PF14103 Domain of unknown function (DUF4276) 11 220 9.1E-50 T 23-04-2016 IPR025455 Protein of unknown function DUF4276 UPTC3659_RS00905 f5c3683cf12361652e5164f884e2be6f 615 PANTHER PTHR41786:SF1 80 612 3.8E-15 T 23-04-2016 UPTC3659_RS00905 f5c3683cf12361652e5164f884e2be6f 615 PANTHER PTHR41786 80 612 3.8E-15 T 23-04-2016 UPTC3659_RS00905 f5c3683cf12361652e5164f884e2be6f 615 Pfam PF01973 Protein of unknown function DUF115 206 380 2.6E-44 T 23-04-2016 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like UPTC3659_RS02985 dc6d075ec7f562918f2ba4005cb27610 609 Pfam PF05935 Arylsulfotransferase (ASST) 40 598 4.4E-168 T 23-04-2016 IPR010262 Arylsulfotransferase UPTC3659_RS09040 ba666ef35bfaecf038873d3aa17b71f0 242 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 4.6E-4 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site UPTC3659_RS03515 26ae73fe7f23e7f0e9b28ec2809e4361 369 Pfam PF01098 Cell cycle protein 9 356 4.4E-86 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 UPTC3659_RS03515 26ae73fe7f23e7f0e9b28ec2809e4361 369 PANTHER PTHR30474:SF1 1 369 8.6E-99 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 UPTC3659_RS03515 26ae73fe7f23e7f0e9b28ec2809e4361 369 PANTHER PTHR30474 1 369 8.6E-99 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 UPTC3659_RS03325 08a91466239d121927480df46266547d 430 Pfam PF03237 Terminase-like family 69 408 5.4E-11 T 23-04-2016 IPR004921 Terminase, large subunit UPTC3659_RS08120 8a58daeca514668f79390b2628e77dd6 178 Pfam PF09624 Protein of unknown function (DUF2393) 32 178 3.6E-25 T 23-04-2016 IPR013417 Conserved hypothetical protein CHP02588 UPTC3659_RS06965 05d30f4abdf10e06894a989ebfc072f2 430 PANTHER PTHR30489:SF16 278 430 1.3E-57 T 23-04-2016 UPTC3659_RS06965 05d30f4abdf10e06894a989ebfc072f2 430 PANTHER PTHR30489:SF16 1 259 1.3E-57 T 23-04-2016 UPTC3659_RS06965 05d30f4abdf10e06894a989ebfc072f2 430 Pfam PF02687 FtsX-like permease family 309 422 7.7E-19 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 UPTC3659_RS06965 05d30f4abdf10e06894a989ebfc072f2 430 Pfam PF12704 MacB-like periplasmic core domain 19 219 8.8E-7 T 23-04-2016 IPR025857 MacB-like periplasmic core domain UPTC3659_RS06965 05d30f4abdf10e06894a989ebfc072f2 430 PANTHER PTHR30489 278 430 1.3E-57 T 23-04-2016 UPTC3659_RS06965 05d30f4abdf10e06894a989ebfc072f2 430 PANTHER PTHR30489 1 259 1.3E-57 T 23-04-2016 UPTC3659_RS04510 e281a8932a49ebb7d041b896578cecd3 66 Pfam PF11127 Protein of unknown function (DUF2892) 1 50 2.8E-9 T 23-04-2016 IPR021309 Protein of unknown function DUF2892 UPTC3659_RS06125 37a05149354c7022d93d0c08d0f39f33 235 SUPERFAMILY SSF75708 42 233 1.44E-33 T 23-04-2016 UPTC3659_RS06125 37a05149354c7022d93d0c08d0f39f33 235 Gene3D G3DSA:1.10.287.500 70 193 2.1E-6 T 23-04-2016 UPTC3659_RS08605 fccaf34e4e7c4611943d9f5ee79fa0f4 202 Pfam PF00156 Phosphoribosyl transferase domain 34 156 6.2E-9 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 UPTC3659_RS08605 fccaf34e4e7c4611943d9f5ee79fa0f4 202 SUPERFAMILY SSF53271 7 149 3.27E-35 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS08605 fccaf34e4e7c4611943d9f5ee79fa0f4 202 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 202 24.438 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS08605 fccaf34e4e7c4611943d9f5ee79fa0f4 202 PANTHER PTHR19278 9 146 3.1E-25 T 23-04-2016 UPTC3659_RS08605 fccaf34e4e7c4611943d9f5ee79fa0f4 202 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 2 200 1.1E-86 T 23-04-2016 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 UPTC3659_RS08605 fccaf34e4e7c4611943d9f5ee79fa0f4 202 Gene3D G3DSA:3.40.50.2020 5 200 2.7E-41 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like UPTC3659_RS02280 1e4be7faac0fb8867f95dba3d298220d 246 SUPERFAMILY SSF54523 5 139 2.28E-8 T 23-04-2016 UPTC3659_RS05210 f35adad6fee756fa9171795601aceefa 116 Pfam PF14132 Domain of unknown function (DUF4299) 12 111 2.2E-9 T 23-04-2016 IPR025387 Protein of unknown function DUF4299 UPTC3659_RS05275 f35adad6fee756fa9171795601aceefa 116 Pfam PF14132 Domain of unknown function (DUF4299) 12 111 2.2E-9 T 23-04-2016 IPR025387 Protein of unknown function DUF4299 UPTC3659_RS05145 f35adad6fee756fa9171795601aceefa 116 Pfam PF14132 Domain of unknown function (DUF4299) 12 111 2.2E-9 T 23-04-2016 IPR025387 Protein of unknown function DUF4299 UPTC3659_RS05335 f35adad6fee756fa9171795601aceefa 116 Pfam PF14132 Domain of unknown function (DUF4299) 12 111 2.2E-9 T 23-04-2016 IPR025387 Protein of unknown function DUF4299 UPTC3659_RS03490 f4f4e9e6c0779c46501afe271a4b59a7 316 SUPERFAMILY SSF53335 8 312 1.41E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UPTC3659_RS03490 f4f4e9e6c0779c46501afe271a4b59a7 316 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 45 263 1.4E-16 T 23-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA UPTC3659_RS07940 c41df2a91f8fe23415939c5cf493d646 365 PANTHER PTHR30372 10 333 4.2E-52 T 23-04-2016 UPTC3659_RS07940 c41df2a91f8fe23415939c5cf493d646 365 Pfam PF02684 Lipid-A-disaccharide synthetase 5 331 6.2E-87 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 UPTC3659_RS07940 c41df2a91f8fe23415939c5cf493d646 365 SUPERFAMILY SSF53756 58 279 1.88E-15 T 23-04-2016 UPTC3659_RS07940 c41df2a91f8fe23415939c5cf493d646 365 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 333 8.3E-74 T 23-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 UPTC3659_RS07940 c41df2a91f8fe23415939c5cf493d646 365 PANTHER PTHR30372:SF0 10 333 4.2E-52 T 23-04-2016 UPTC3659_RS08055 55108a2b1d23fc3ff6133d4911b6eb6c 181 Gene3D G3DSA:3.40.1350.10 82 124 7.5E-4 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 UPTC3659_RS00745 1d27b84dc3eca544ba5fb4c45ce7f674 206 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 197 1.4E-50 T 23-04-2016 IPR014094 Penicillin-binding protein activator LpoB UPTC3659_RS00745 1d27b84dc3eca544ba5fb4c45ce7f674 206 Pfam PF13036 Peptidoglycan-synthase activator LpoB 10 195 2.9E-45 T 23-04-2016 IPR014094 Penicillin-binding protein activator LpoB UPTC3659_RS05895 96743054b63ef8ffcb3dd39c5710c128 218 Pfam PF13525 Outer membrane lipoprotein 31 180 2.8E-17 T 23-04-2016 UPTC3659_RS06950 fc9cb8c1153762cd8ec17beb4416a767 163 Gene3D G3DSA:3.40.30.10 3 161 2.6E-26 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS06950 fc9cb8c1153762cd8ec17beb4416a767 163 Pfam PF00578 AhpC/TSA family 30 143 2.4E-11 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 UPTC3659_RS06950 fc9cb8c1153762cd8ec17beb4416a767 163 SUPERFAMILY SSF52833 29 162 7.58E-23 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS02020 dbbecebaf92cb3f32a7cc859961187c6 129 ProSitePatterns PS00360 Ribosomal protein S9 signature. 68 86 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02020 dbbecebaf92cb3f32a7cc859961187c6 129 SUPERFAMILY SSF54211 4 129 1.48E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold UPTC3659_RS02020 dbbecebaf92cb3f32a7cc859961187c6 129 Pfam PF00380 Ribosomal protein S9/S16 8 129 1.6E-42 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02020 dbbecebaf92cb3f32a7cc859961187c6 129 PANTHER PTHR21569 5 129 5.7E-56 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 UPTC3659_RS02020 dbbecebaf92cb3f32a7cc859961187c6 129 Gene3D G3DSA:3.30.230.10 4 129 7.2E-46 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UPTC3659_RS02020 dbbecebaf92cb3f32a7cc859961187c6 129 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 129 29.254 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid UPTC3659_RS01495 dd6d5d15909718f52a3094eeec33814a 389 SUPERFAMILY SSF53383 49 385 2.31E-92 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS01495 dd6d5d15909718f52a3094eeec33814a 389 Gene3D G3DSA:3.90.1150.10 255 385 4.4E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS01495 dd6d5d15909718f52a3094eeec33814a 389 PANTHER PTHR11808 5 387 5.3E-127 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 UPTC3659_RS01495 dd6d5d15909718f52a3094eeec33814a 389 Gene3D G3DSA:3.40.640.10 4 254 2.0E-71 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS01495 dd6d5d15909718f52a3094eeec33814a 389 PIRSF PIRSF001434 1 386 1.6E-110 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 UPTC3659_RS01495 dd6d5d15909718f52a3094eeec33814a 389 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 UPTC3659_RS01495 dd6d5d15909718f52a3094eeec33814a 389 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 383 2.0E-103 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 UPTC3659_RS07705 bc07a935ff7855c15173acc3f2bdcccd 274 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 1 263 5.3E-73 T 23-04-2016 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase UPTC3659_RS06110 7a723f8228d8b947db26e69e1f3eaa4f 168 Pfam PF13118 Protein of unknown function (DUF3972) 9 130 1.5E-48 T 23-04-2016 IPR025002 Domain of unknown function DUF3972 UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 PANTHER PTHR10458 1 171 1.1E-53 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 Gene3D G3DSA:3.90.45.10 4 172 1.3E-56 T 23-04-2016 IPR023635 Peptide deformylase UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 167 3.9E-52 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 SUPERFAMILY SSF56420 1 171 5.63E-57 T 23-04-2016 IPR023635 Peptide deformylase UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 Pfam PF01327 Polypeptide deformylase 3 159 4.3E-48 T 23-04-2016 IPR023635 Peptide deformylase UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 PIRSF PIRSF004749 1 174 2.3E-46 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 Hamap MF_00163 Peptide deformylase [def]. 1 169 27.995 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 PRINTS PR01576 Peptide deformylase signature 108 126 2.7E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 PRINTS PR01576 Peptide deformylase signature 96 107 2.7E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 PRINTS PR01576 Peptide deformylase signature 32 61 2.7E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 UPTC3659_RS08445 8f19a13adaac15382105c335d80680e3 174 PRINTS PR01576 Peptide deformylase signature 127 156 2.7E-33 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 UPTC3659_RS05080 e1c92a8f4dd4df462c333730914e7038 300 SUPERFAMILY SSF49879 10 107 6.1E-7 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 UPTC3659_RS05080 e1c92a8f4dd4df462c333730914e7038 300 Gene3D G3DSA:2.60.200.20 27 110 5.5E-5 T 23-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 UPTC3659_RS00680 f56bde7a9827286cd634813ad95411bf 173 Pfam PF16522 Flagellar FLiS export co-chaperone, HP1076 7 148 1.7E-39 T 23-04-2016 IPR032411 Flagellar FLiS export co-chaperone, HP1076 UPTC3659_RS07255 04ad4998d97cca94cb2dcd4de2519054 187 PANTHER PTHR30353 1 182 1.1E-20 T 23-04-2016 IPR032818 DedA family UPTC3659_RS07255 04ad4998d97cca94cb2dcd4de2519054 187 Pfam PF09335 SNARE associated Golgi protein 25 144 7.5E-15 T 23-04-2016 IPR032816 SNARE associated Golgi protein UPTC3659_RS08045 63ca32e1455099a6735cc3b6a2581fbf 344 SUPERFAMILY SSF56235 49 333 1.54E-89 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal UPTC3659_RS08045 63ca32e1455099a6735cc3b6a2581fbf 344 PANTHER PTHR10188 32 319 2.4E-112 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 UPTC3659_RS08045 63ca32e1455099a6735cc3b6a2581fbf 344 Pfam PF01112 Asparaginase 32 331 9.5E-106 T 23-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 UPTC3659_RS08240 521a8d1a85620c9bf616104041592df5 787 SUPERFAMILY SSF48452 258 361 8.54E-7 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS02890 8a25e9e749e0c0fbb316e148544d07b3 137 PANTHER PTHR35535 4 136 1.3E-15 T 23-04-2016 UPTC3659_RS02890 8a25e9e749e0c0fbb316e148544d07b3 137 Pfam PF03724 META domain 27 134 1.5E-18 T 23-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ UPTC3659_RS02890 8a25e9e749e0c0fbb316e148544d07b3 137 PANTHER PTHR35535:SF1 4 136 1.3E-15 T 23-04-2016 UPTC3659_RS07290 303b1f60a2559ee0e86bc81c2e524066 172 Gene3D G3DSA:3.40.30.10 3 154 2.0E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS07290 303b1f60a2559ee0e86bc81c2e524066 172 ProSitePatterns PS01265 Tpx family signature. 82 93 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 UPTC3659_RS07290 303b1f60a2559ee0e86bc81c2e524066 172 Pfam PF08534 Redoxin 20 156 2.4E-13 T 23-04-2016 IPR013740 Redoxin GO:0016491 UPTC3659_RS07290 303b1f60a2559ee0e86bc81c2e524066 172 SUPERFAMILY SSF52833 1 158 4.42E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold UPTC3659_RS07290 303b1f60a2559ee0e86bc81c2e524066 172 PANTHER PTHR10681 4 151 3.5E-28 T 23-04-2016 UPTC3659_RS07290 303b1f60a2559ee0e86bc81c2e524066 172 PANTHER PTHR10681:SF81 4 151 3.5E-28 T 23-04-2016 UPTC3659_RS04200 4ce6218d7afb73b5f57559c4ee0d638a 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 70 4.4E-7 T 23-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 UPTC3659_RS04200 4ce6218d7afb73b5f57559c4ee0d638a 163 SUPERFAMILY SSF53254 1 141 4.91E-19 T 23-04-2016 IPR029033 Histidine phosphatase superfamily UPTC3659_RS04200 4ce6218d7afb73b5f57559c4ee0d638a 163 Gene3D G3DSA:3.40.50.1240 1 159 3.5E-36 T 23-04-2016 IPR029033 Histidine phosphatase superfamily UPTC3659_RS09060 bff9f60e6c10cfb905065de8fe9e87e7 989 SMART SM00912 27 151 1.8E-15 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS09060 bff9f60e6c10cfb905065de8fe9e87e7 989 Gene3D G3DSA:2.160.20.10 52 241 1.0E-9 T 23-04-2016 IPR012334 Pectin lyase fold UPTC3659_RS09060 bff9f60e6c10cfb905065de8fe9e87e7 989 SUPERFAMILY SSF51126 52 283 5.34E-23 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor UPTC3659_RS09060 bff9f60e6c10cfb905065de8fe9e87e7 989 Pfam PF05860 haemagglutination activity domain 53 149 5.7E-15 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS09060 bff9f60e6c10cfb905065de8fe9e87e7 989 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 77 146 2.1E-14 T 23-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 PANTHER PTHR37841 3 590 4.2E-29 T 23-04-2016 UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 SUPERFAMILY SSF69360 5 224 6.02E-10 T 23-04-2016 UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 63 96 3.0E-10 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 144 177 1.6E-9 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 580 598 0.0098 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 453 473 0.01 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 211 244 0.0021 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 756 786 0.0025 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 721 756 5.4E-4 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 418 448 1.6E-8 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 29 63 1.2E-7 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 321 346 0.016 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 688 720 0.017 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 382 416 1.3E-4 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 546 579 2.1E-7 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS04845 be04e9fcfc14502c230555a82f7105dc 800 Pfam PF14903 WG containing repeat 177 210 1.4E-12 T 23-04-2016 IPR032774 WG containing repeat UPTC3659_RS00160 5e0c6f3a2eec483ffbd7001edbe9a035 268 PANTHER PTHR30622 1 264 1.5E-99 T 23-04-2016 UPTC3659_RS00160 5e0c6f3a2eec483ffbd7001edbe9a035 268 PANTHER PTHR30622:SF3 1 264 1.5E-99 T 23-04-2016 UPTC3659_RS00160 5e0c6f3a2eec483ffbd7001edbe9a035 268 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 3 256 18.03 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 UPTC3659_RS00160 5e0c6f3a2eec483ffbd7001edbe9a035 268 Pfam PF02673 Bacitracin resistance protein BacA 8 251 2.2E-73 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 UPTC3659_RS00160 5e0c6f3a2eec483ffbd7001edbe9a035 268 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 8 249 9.6E-71 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 UPTC3659_RS05135 c04d2dd7d723e797ab241bc6f5ae2fed 235 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 131 218 2.6E-14 T 23-04-2016 IPR032871 AHH domain-containing protein UPTC3659_RS05325 c04d2dd7d723e797ab241bc6f5ae2fed 235 Pfam PF14412 A nuclease family of the HNH/ENDO VII superfamily with conserved AHH 131 218 2.6E-14 T 23-04-2016 IPR032871 AHH domain-containing protein UPTC3659_RS00530 a0d566f64ca55384d89b677136c54c0d 600 Gene3D G3DSA:1.10.287.950 354 513 3.4E-42 T 23-04-2016 UPTC3659_RS00530 a0d566f64ca55384d89b677136c54c0d 600 Gene3D G3DSA:1.10.287.950 549 569 3.4E-42 T 23-04-2016 UPTC3659_RS00530 a0d566f64ca55384d89b677136c54c0d 600 SMART SM00283 339 600 4.9E-27 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS00530 a0d566f64ca55384d89b677136c54c0d 600 SUPERFAMILY SSF58104 292 599 4.58E-50 T 23-04-2016 UPTC3659_RS00530 a0d566f64ca55384d89b677136c54c0d 600 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 415 599 1.0E-34 T 23-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 UPTC3659_RS00530 a0d566f64ca55384d89b677136c54c0d 600 PANTHER PTHR32089 234 600 1.8E-48 T 23-04-2016 UPTC3659_RS06640 eed33e8d54421cc4d16c46f436318f4c 73 SUPERFAMILY SSF47598 4 44 1.26E-5 T 23-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 UPTC3659_RS06640 eed33e8d54421cc4d16c46f436318f4c 73 Gene3D G3DSA:1.10.1220.10 2 42 3.3E-4 T 23-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 UPTC3659_RS00625 37aedaef70c8fa0294a4cc4af5c80c84 89 Pfam PF01106 NifU-like domain 18 76 4.7E-18 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 UPTC3659_RS00625 37aedaef70c8fa0294a4cc4af5c80c84 89 SUPERFAMILY SSF117916 2 81 2.4E-20 T 23-04-2016 UPTC3659_RS00625 37aedaef70c8fa0294a4cc4af5c80c84 89 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 16 77 5.0E-22 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 UPTC3659_RS03110 c42845fa7b2ca425f36652bdf09a3102 388 Gene3D G3DSA:3.40.640.10 43 270 8.6E-66 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 UPTC3659_RS03110 c42845fa7b2ca425f36652bdf09a3102 388 SUPERFAMILY SSF53383 2 387 4.26E-104 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase UPTC3659_RS03110 c42845fa7b2ca425f36652bdf09a3102 388 Gene3D G3DSA:3.90.1150.10 271 388 1.3E-37 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 UPTC3659_RS03110 c42845fa7b2ca425f36652bdf09a3102 388 PANTHER PTHR11751 12 388 8.9E-143 T 23-04-2016 UPTC3659_RS03110 c42845fa7b2ca425f36652bdf09a3102 388 PANTHER PTHR11751:SF306 12 388 8.9E-143 T 23-04-2016 UPTC3659_RS03110 c42845fa7b2ca425f36652bdf09a3102 388 Pfam PF00155 Aminotransferase class I and II 30 381 2.9E-64 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UPTC3659_RS08350 91eadb86f9cfcff1ee7becc3b24a9062 708 Gene3D G3DSA:3.40.50.300 411 487 3.0E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08350 91eadb86f9cfcff1ee7becc3b24a9062 708 Gene3D G3DSA:3.40.50.300 321 343 3.0E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS08350 91eadb86f9cfcff1ee7becc3b24a9062 708 SUPERFAMILY SSF52540 270 486 2.6E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS06530 55562946e17dd90ca1afe89a56a6c2ba 258 PANTHER PTHR34390 1 251 4.7E-35 T 23-04-2016 UPTC3659_RS06530 55562946e17dd90ca1afe89a56a6c2ba 258 Pfam PF06738 Putative threonine/serine exporter 18 251 7.0E-48 T 23-04-2016 IPR010619 Putative threonine/serine exporter UPTC3659_RS06530 55562946e17dd90ca1afe89a56a6c2ba 258 PANTHER PTHR34390:SF2 1 251 4.7E-35 T 23-04-2016 UPTC3659_RS05930 85fa642c2005a65d2fe87accb020d8d4 88 Gene3D G3DSA:1.10.10.10 4 88 2.5E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS05930 85fa642c2005a65d2fe87accb020d8d4 88 SUPERFAMILY SSF46785 4 86 1.92E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS02130 e805d8c27c4d7aa32cbcd82aceccd32b 105 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 2 89 1.4E-16 T 23-04-2016 IPR016772 Uncharacterised conserved protein UCP020408 UPTC3659_RS02130 e805d8c27c4d7aa32cbcd82aceccd32b 105 PIRSF PIRSF020408 1 104 1.2E-40 T 23-04-2016 IPR016772 Uncharacterised conserved protein UCP020408 UPTC3659_RS01980 7ee0b72a07bb06f1e2343f5677972387 70 Pfam PF13179 Family of unknown function (DUF4006) 1 65 2.3E-31 T 23-04-2016 IPR025065 Protein of unknown function DUF4006 UPTC3659_RS02150 971b43682ed4bf5d82341295953ac018 236 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 7 211 3.7E-17 T 23-04-2016 UPTC3659_RS03645 7611d682602934b5e18dbaa93dd3115a 618 Pfam PF03961 Protein of unknown function (DUF342) 158 551 2.7E-26 T 23-04-2016 IPR005646 Protein of unknown function DUF342 UPTC3659_RS01990 31dc750a624433531401c852bb7e78d9 170 Pfam PF05751 FixH 5 156 2.8E-11 T 23-04-2016 IPR008620 Nitrogen fixation protein FixH UPTC3659_RS06515 7e370a9f5f29cf56d1242a3f74663850 142 PIRSF PIRSF015875 1 142 1.1E-20 T 23-04-2016 IPR007418 Protein of unknown function DUF474 UPTC3659_RS06485 4b4c8a287990b2d46d1259815eb827a0 174 Pfam PF09933 Predicted small integral membrane protein (DUF2165) 14 169 1.7E-52 T 23-04-2016 IPR018681 Protein of unknown function DUF2165, transmembrane UPTC3659_RS01405 8b872032f1b2e38693790d062f16de33 229 Gene3D G3DSA:1.10.287.70 168 224 1.0E-13 T 23-04-2016 UPTC3659_RS01405 8b872032f1b2e38693790d062f16de33 229 Gene3D G3DSA:1.10.287.70 17 43 1.0E-13 T 23-04-2016 UPTC3659_RS01405 8b872032f1b2e38693790d062f16de33 229 SUPERFAMILY SSF81324 81 119 6.41E-15 T 23-04-2016 UPTC3659_RS01405 8b872032f1b2e38693790d062f16de33 229 SUPERFAMILY SSF81324 169 223 6.41E-15 T 23-04-2016 UPTC3659_RS01405 8b872032f1b2e38693790d062f16de33 229 Pfam PF07885 Ion channel 174 222 1.9E-12 T 23-04-2016 IPR013099 Potassium channel domain UPTC3659_RS08070 b36e4ed84eae69211c310cd5d20f9f04 246 Pfam PF04085 rod shape-determining protein MreC 155 242 9.1E-14 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 UPTC3659_RS06410 b97caeba2f2a1dc89077198f562c8754 213 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 30 187 7.5E-57 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 UPTC3659_RS06410 b97caeba2f2a1dc89077198f562c8754 213 SUPERFAMILY SSF55729 14 207 6.89E-66 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase UPTC3659_RS06410 b97caeba2f2a1dc89077198f562c8754 213 PANTHER PTHR30098 6 203 3.4E-48 T 23-04-2016 UPTC3659_RS06410 b97caeba2f2a1dc89077198f562c8754 213 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 201 2.3E-50 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 UPTC3659_RS06410 b97caeba2f2a1dc89077198f562c8754 213 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 213 59.259 T 23-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 UPTC3659_RS03200 cc4432dcee603ed35944ccd2010bac37 219 Pfam PF13599 Pentapeptide repeats (9 copies) 48 107 4.5E-10 T 23-04-2016 IPR001646 Pentapeptide repeat UPTC3659_RS03200 cc4432dcee603ed35944ccd2010bac37 219 PANTHER PTHR14136 22 129 1.4E-14 T 23-04-2016 UPTC3659_RS03200 cc4432dcee603ed35944ccd2010bac37 219 Pfam PF00805 Pentapeptide repeats (8 copies) 111 136 6.5E-4 T 23-04-2016 IPR001646 Pentapeptide repeat UPTC3659_RS03200 cc4432dcee603ed35944ccd2010bac37 219 PANTHER PTHR14136:SF0 22 129 1.4E-14 T 23-04-2016 UPTC3659_RS03200 cc4432dcee603ed35944ccd2010bac37 219 SUPERFAMILY SSF141571 30 145 3.66E-22 T 23-04-2016 UPTC3659_RS03555 4530e659a20e57eba50adc107ea4eec1 72 Pfam PF01192 RNA polymerase Rpb6 15 62 1.3E-11 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS03555 4530e659a20e57eba50adc107ea4eec1 72 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 10 62 7.7E-9 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS03555 4530e659a20e57eba50adc107ea4eec1 72 SMART SM01409 10 64 7.2E-11 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS03555 4530e659a20e57eba50adc107ea4eec1 72 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 3 65 14.335 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS03555 4530e659a20e57eba50adc107ea4eec1 72 SUPERFAMILY SSF63562 6 68 1.31E-16 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS03555 4530e659a20e57eba50adc107ea4eec1 72 Gene3D G3DSA:3.90.940.10 11 65 6.9E-10 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UPTC3659_RS06535 e214d9e1fa8666fd3bfa1fbbed28d4cf 174 PANTHER PTHR34390 7 174 2.4E-27 T 23-04-2016 UPTC3659_RS06535 e214d9e1fa8666fd3bfa1fbbed28d4cf 174 Pfam PF12821 Threonine/Serine exporter, ThrE 10 149 1.2E-31 T 23-04-2016 IPR024528 Threonine/Serine exporter, ThrE UPTC3659_RS00280 c381356cf1dd52b8415fda4b2890518d 125 Pfam PF05154 TM2 domain 43 85 4.3E-10 T 23-04-2016 IPR007829 TM2 domain UPTC3659_RS00860 46c8a485f54a7b246fbecb09367b1331 88 Pfam PF01313 Bacterial export proteins, family 3 6 76 1.1E-27 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UPTC3659_RS00860 46c8a485f54a7b246fbecb09367b1331 88 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 3 87 2.9E-31 T 23-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 UPTC3659_RS00860 46c8a485f54a7b246fbecb09367b1331 88 PANTHER PTHR34040:SF2 1 88 4.1E-33 T 23-04-2016 UPTC3659_RS00860 46c8a485f54a7b246fbecb09367b1331 88 PIRSF PIRSF004669 1 88 1.8E-30 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UPTC3659_RS00860 46c8a485f54a7b246fbecb09367b1331 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 53 75 2.72E-21 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UPTC3659_RS00860 46c8a485f54a7b246fbecb09367b1331 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 17 38 2.72E-21 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UPTC3659_RS00860 46c8a485f54a7b246fbecb09367b1331 88 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 38 53 2.72E-21 T 23-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UPTC3659_RS00860 46c8a485f54a7b246fbecb09367b1331 88 PANTHER PTHR34040 1 88 4.1E-33 T 23-04-2016 UPTC3659_RS04190 1af200702926eb0d5815ff74ec6f5963 136 SUPERFAMILY SSF160574 18 133 3.14E-30 T 23-04-2016 UPTC3659_RS04190 1af200702926eb0d5815ff74ec6f5963 136 Pfam PF11396 Putative beta-lactamase-inhibitor-like, PepSY-like 51 130 2.4E-19 T 23-04-2016 IPR021533 Putative beta-lactamase-inhibitor-like, PepSY-like UPTC3659_RS07445 45dc7c57d02b0b8cba2b1766d29be66c 205 Pfam PF02666 Phosphatidylserine decarboxylase 76 202 3.1E-5 T 23-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 UPTC3659_RS08250 e929a3d6790e31e4bd5221286f187703 489 PANTHER PTHR22773:SF40 1 483 1.7E-115 T 23-04-2016 UPTC3659_RS08250 e929a3d6790e31e4bd5221286f187703 489 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 2 469 2.3E-131 T 23-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08250 e929a3d6790e31e4bd5221286f187703 489 Pfam PF00361 Proton-conducting membrane transporter 114 399 3.3E-65 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 UPTC3659_RS08250 e929a3d6790e31e4bd5221286f187703 489 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 310 329 2.93E-23 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08250 e929a3d6790e31e4bd5221286f187703 489 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 362 388 2.93E-23 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08250 e929a3d6790e31e4bd5221286f187703 489 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 147 171 2.93E-23 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08250 e929a3d6790e31e4bd5221286f187703 489 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 222 246 2.93E-23 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08250 e929a3d6790e31e4bd5221286f187703 489 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 119 138 2.93E-23 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 UPTC3659_RS08250 e929a3d6790e31e4bd5221286f187703 489 PANTHER PTHR22773 1 483 1.7E-115 T 23-04-2016 UPTC3659_RS04585 592e0b538715d60835a0ff604befa504 304 PANTHER PTHR30425 2 304 1.3E-81 T 23-04-2016 UPTC3659_RS04585 592e0b538715d60835a0ff604befa504 304 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 4 298 1.3E-89 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 UPTC3659_RS04585 592e0b538715d60835a0ff604befa504 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 298 1.7E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS04585 592e0b538715d60835a0ff604befa504 304 Gene3D G3DSA:1.10.3720.10 9 303 3.8E-36 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS04585 592e0b538715d60835a0ff604befa504 304 SUPERFAMILY SSF161098 5 293 4.95E-28 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 UPTC3659_RS04585 592e0b538715d60835a0ff604befa504 304 PANTHER PTHR30425:SF3 2 304 1.3E-81 T 23-04-2016 UPTC3659_RS02215 f8c33e23b42a562e18b1b58cc7bcf34c 735 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 516 628 1.2E-32 T 23-04-2016 IPR005046 Protein of unknown function DUF285 UPTC3659_RS02215 f8c33e23b42a562e18b1b58cc7bcf34c 735 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 386 482 4.9E-34 T 23-04-2016 IPR005046 Protein of unknown function DUF285 UPTC3659_RS02215 f8c33e23b42a562e18b1b58cc7bcf34c 735 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 112 212 8.8E-37 T 23-04-2016 IPR005046 Protein of unknown function DUF285 UPTC3659_RS02215 f8c33e23b42a562e18b1b58cc7bcf34c 735 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 237 337 1.7E-35 T 23-04-2016 IPR005046 Protein of unknown function DUF285 UPTC3659_RS02215 f8c33e23b42a562e18b1b58cc7bcf34c 735 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 279 301 1.8E-4 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat UPTC3659_RS02215 f8c33e23b42a562e18b1b58cc7bcf34c 735 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 114 126 2.2E-4 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat UPTC3659_RS02215 f8c33e23b42a562e18b1b58cc7bcf34c 735 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 403 426 4.2E-4 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat UPTC3659_RS02215 f8c33e23b42a562e18b1b58cc7bcf34c 735 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 639 662 4.0E-5 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat UPTC3659_RS02215 f8c33e23b42a562e18b1b58cc7bcf34c 735 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 388 401 5.0E-5 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat UPTC3659_RS08895 708a9e9522db7c70502d2169d276505a 391 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 327 3.3E-7 T 23-04-2016 IPR010352 Protein of unknown function DUF945 UPTC3659_RS07720 c65021e53fdb8eea0df4a895df637d0b 259 PANTHER PTHR30269 1 257 6.0E-33 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 UPTC3659_RS07720 c65021e53fdb8eea0df4a895df637d0b 259 Pfam PF01925 Sulfite exporter TauE/SafE 9 244 1.4E-37 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 UPTC3659_RS06160 81bb9079c4a90c74f57f27cc73f0218b 111 Pfam PF03927 NapD protein 1 74 7.5E-19 T 23-04-2016 IPR005623 Chaperone NapD, nitrate reductase assembly UPTC3659_RS07655 7f6f87bef3d03039818e440ac59f0629 74 SUPERFAMILY SSF47336 8 70 8.8E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain UPTC3659_RS07655 7f6f87bef3d03039818e440ac59f0629 74 Gene3D G3DSA:1.10.1200.10 3 69 1.0E-6 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain UPTC3659_RS04425 2b89db6ade545eb17a71ad0a71f7388d 132 Pfam PF04186 FxsA cytoplasmic membrane protein 9 94 6.3E-10 T 23-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 UPTC3659_RS06290 ace4be5c532fd50e5d519a6c7acb4858 134 Pfam PF04519 Polymer-forming cytoskeletal 16 111 1.8E-22 T 23-04-2016 IPR007607 Protein of unknown function DUF583 UPTC3659_RS06290 ace4be5c532fd50e5d519a6c7acb4858 134 PANTHER PTHR35024 13 131 3.9E-23 T 23-04-2016 UPTC3659_RS06290 ace4be5c532fd50e5d519a6c7acb4858 134 PANTHER PTHR35024:SF2 13 131 3.9E-23 T 23-04-2016 UPTC3659_RS01410 ca874d4c0baa5f7dbb90f9940d5272ab 200 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 61 84 7.7E-8 T 23-04-2016 IPR011889 Bacterial surface protein 26-residue repeat UPTC3659_RS01410 ca874d4c0baa5f7dbb90f9940d5272ab 200 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 20 114 5.7E-31 T 23-04-2016 IPR005046 Protein of unknown function DUF285 UPTC3659_RS08265 364ef317ff82017fca290f58f11f3a42 168 PANTHER PTHR33269:SF1 1 168 3.0E-23 T 23-04-2016 UPTC3659_RS08265 364ef317ff82017fca290f58f11f3a42 168 PANTHER PTHR33269 1 168 3.0E-23 T 23-04-2016 UPTC3659_RS08265 364ef317ff82017fca290f58f11f3a42 168 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 158 1.1E-26 T 23-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 UPTC3659_RS07845 2818b330000d742a488a78caa7727aab 272 Pfam PF02108 Flagellar assembly protein FliH 142 266 7.8E-21 T 23-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE UPTC3659_RS07275 81f792e2773182ded4712e28106ee5c3 233 Pfam PF15436 Plasminogen-binding protein pgbA N-terminal 17 227 8.2E-65 T 23-04-2016 IPR029276 Plasminogen-binding protein PgbA, N-terminal UPTC3659_RS08610 ee5d081cd571a57836d90d2c383ce1de 138 Pfam PF06271 RDD family 9 129 1.8E-15 T 23-04-2016 IPR010432 RDD UPTC3659_RS02955 1fac171e6f6d8ee4bda72bb74ef88e96 405 SUPERFAMILY SSF53822 109 316 5.65E-5 T 23-04-2016 IPR028082 Periplasmic binding protein-like I UPTC3659_RS07700 64b451465e745056a5e4f23749d1b951 219 Pfam PF08889 WbqC-like protein family 2 202 3.5E-53 T 23-04-2016 IPR014985 WbqC-like protein family UPTC3659_RS05795 f140985fba2d263e7efb17c429fd4218 350 SUPERFAMILY SSF64182 6 319 1.83E-14 T 23-04-2016 UPTC3659_RS00835 3cbfaa1f646576267cf00f683aee82c2 227 Pfam PF11741 AMIN domain 144 218 6.6E-11 T 23-04-2016 IPR021731 AMIN domain UPTC3659_RS08955 572cf608279d43bc829b6488058203cf 115 Pfam PF01420 Type I restriction modification DNA specificity domain 20 103 8.1E-5 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 UPTC3659_RS08955 572cf608279d43bc829b6488058203cf 115 SUPERFAMILY SSF116734 6 104 6.7E-12 T 23-04-2016 UPTC3659_RS01065 d32396b3650ae7e8aa2281900a621524 186 PIRSF PIRSF037713 2 185 1.9E-87 T 23-04-2016 IPR017269 Biopolymer transport ExbB-like protein 1 UPTC3659_RS01065 d32396b3650ae7e8aa2281900a621524 186 Pfam PF01618 MotA/TolQ/ExbB proton channel family 78 173 1.7E-25 T 23-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 UPTC3659_RS01065 d32396b3650ae7e8aa2281900a621524 186 PANTHER PTHR30625 19 177 3.4E-16 T 23-04-2016 UPTC3659_RS03175 969561ff3385226e2a33623fa6198c8a 283 Gene3D G3DSA:3.40.1350.10 166 278 5.9E-8 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 UPTC3659_RS03175 969561ff3385226e2a33623fa6198c8a 283 Pfam PF03008 Archaea bacterial proteins of unknown function 143 229 9.1E-13 T 23-04-2016 IPR004256 Domain of unknown function DUF234, DEXX-box ATPase C-terminal UPTC3659_RS00695 9e22850167ccbf055a245a596192dde5 278 SUPERFAMILY SSF63825 25 258 3.4E-22 T 23-04-2016 UPTC3659_RS00695 9e22850167ccbf055a245a596192dde5 278 Gene3D G3DSA:2.120.10.30 23 277 6.2E-18 T 23-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like UPTC3659_RS00830 83c86d1c76937b2e31c88697d9cbf1ee 127 SUPERFAMILY SSF46458 6 117 5.04E-26 T 23-04-2016 IPR009050 Globin-like UPTC3659_RS00830 83c86d1c76937b2e31c88697d9cbf1ee 127 Gene3D G3DSA:1.10.490.10 4 117 9.7E-21 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 UPTC3659_RS00830 83c86d1c76937b2e31c88697d9cbf1ee 127 Pfam PF01152 Bacterial-like globin 9 115 1.7E-7 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 UPTC3659_RS02270 9c305de9ad1dcacc3926856d03463c53 177 Gene3D G3DSA:2.30.110.10 20 72 5.7E-4 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 UPTC3659_RS08765 faa04fc1f6d7d064e97c5d65d037a525 450 Pfam PF03553 Na+/H+ antiporter family 162 438 1.9E-52 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 UPTC3659_RS08765 faa04fc1f6d7d064e97c5d65d037a525 450 PANTHER PTHR37821 3 45 8.5E-128 T 23-04-2016 UPTC3659_RS08765 faa04fc1f6d7d064e97c5d65d037a525 450 PANTHER PTHR37821 62 449 8.5E-128 T 23-04-2016 UPTC3659_RS08765 faa04fc1f6d7d064e97c5d65d037a525 450 Pfam PF13726 Na+-H+ antiporter family 5 107 4.7E-17 T 23-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal UPTC3659_RS00945 8b6b636833e47cb3eb9a96c9c9a6551d 140 Gene3D G3DSA:3.40.1550.10 46 108 3.3E-4 T 23-04-2016 IPR028976 CheC-like domain UPTC3659_RS00945 8b6b636833e47cb3eb9a96c9c9a6551d 140 SUPERFAMILY SSF103039 46 108 1.83E-6 T 23-04-2016 IPR028976 CheC-like domain UPTC3659_RS08590 0ee5d1060530343218cf65930217ad96 233 PANTHER PTHR23291 4 233 1.9E-68 T 23-04-2016 IPR006214 Bax inhibitor 1-related UPTC3659_RS08590 0ee5d1060530343218cf65930217ad96 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 27 227 3.8E-53 T 23-04-2016 UPTC3659_RS01665 b3f6ea80048b5648419d4b169c47a1aa 333 Pfam PF13524 Glycosyl transferases group 1 232 325 3.3E-12 T 23-04-2016 UPTC3659_RS04680 7103ca0bcd483fa9145d8a61ba179751 833 Pfam PF13109 AsmA-like C-terminal region 613 825 1.1E-63 T 23-04-2016 UPTC3659_RS04680 7103ca0bcd483fa9145d8a61ba179751 833 Pfam PF13116 Protein of unknown function 198 428 1.5E-17 T 23-04-2016 IPR025263 Domain of unknown function DUF3971 UPTC3659_RS07650 3a2636874f3748b7e04eca4b63f5b2a1 334 SUPERFAMILY SSF52540 4 57 9.18E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07650 3a2636874f3748b7e04eca4b63f5b2a1 334 SUPERFAMILY SSF52540 85 216 9.18E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS07830 d15f0b29eda7731f6a0742879fb3cbff 403 SUPERFAMILY SSF55154 57 166 4.25E-8 T 23-04-2016 IPR033469 CYTH-like domain UPTC3659_RS07830 d15f0b29eda7731f6a0742879fb3cbff 403 SUPERFAMILY SSF55154 13 26 4.25E-8 T 23-04-2016 IPR033469 CYTH-like domain UPTC3659_RS07830 d15f0b29eda7731f6a0742879fb3cbff 403 Gene3D G3DSA:2.40.320.10 10 166 1.2E-12 T 23-04-2016 IPR023577 CYTH domain UPTC3659_RS01070 cfbe27b929c8e47d584238196bd09191 128 Pfam PF02472 Biopolymer transport protein ExbD/TolR 5 128 1.0E-28 T 23-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 UPTC3659_RS01070 cfbe27b929c8e47d584238196bd09191 128 PANTHER PTHR30558 4 128 2.2E-27 T 23-04-2016 UPTC3659_RS03330 deb118d85e0a8bb8675fe50f2fa82616 87 Gene3D G3DSA:1.10.10.60 48 86 7.1E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 UPTC3659_RS07175 2becd5d2593fcbc2f21665b89bf7e7e1 445 PANTHER PTHR11616:SF167 6 444 1.7E-110 T 23-04-2016 UPTC3659_RS07175 2becd5d2593fcbc2f21665b89bf7e7e1 445 PANTHER PTHR11616 6 444 1.7E-110 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07175 2becd5d2593fcbc2f21665b89bf7e7e1 445 SUPERFAMILY SSF161070 6 444 3.79E-106 T 23-04-2016 UPTC3659_RS07175 2becd5d2593fcbc2f21665b89bf7e7e1 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 248 268 1.0E-9 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07175 2becd5d2593fcbc2f21665b89bf7e7e1 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 296 315 1.0E-9 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07175 2becd5d2593fcbc2f21665b89bf7e7e1 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 9 30 1.0E-9 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07175 2becd5d2593fcbc2f21665b89bf7e7e1 445 Pfam PF00209 Sodium:neurotransmitter symporter family 6 120 9.3E-20 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS07175 2becd5d2593fcbc2f21665b89bf7e7e1 445 Pfam PF00209 Sodium:neurotransmitter symporter family 142 441 2.3E-17 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UPTC3659_RS02050 5b1bad629ac1443b2823f3540dfaa96a 109 SUPERFAMILY SSF81901 14 103 1.15E-5 T 23-04-2016 UPTC3659_RS02050 5b1bad629ac1443b2823f3540dfaa96a 109 Gene3D G3DSA:1.25.40.10 31 107 6.5E-5 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 UPTC3659_RS08290 a5eb768895ea762648e1093184290f51 75 Pfam PF16514 putative NADH-ubiquinone oxidoreductase chain E 1 72 5.8E-30 T 23-04-2016 IPR032424 Putative NADH-ubiquinone oxidoreductase chain E UPTC3659_RS06305 5ba74f97b0705c4587352ec10b2b2df6 457 SUPERFAMILY SSF55073 326 429 4.16E-5 T 23-04-2016 IPR029787 Nucleotide cyclase UPTC3659_RS00725 990a975a10cbbfa565b7cf9146001896 249 Pfam PF04402 Protein of unknown function (DUF541) 58 209 1.2E-5 T 23-04-2016 IPR007497 Protein of unknown function DUF541 UPTC3659_RS02410 a6e0cbd78cd9be81e0fc0f942f81e48f 61 Gene3D G3DSA:1.10.10.700 1 48 1.3E-4 T 23-04-2016 UPTC3659_RS03275 4c8301ebff3b63729a4a90b4dbe15b10 171 Pfam PF13274 Protein of unknown function (DUF4065) 28 125 3.3E-22 T 23-04-2016 IPR025272 Domain of unknown function DUF4065 UPTC3659_RS02965 da1bea9168c2540ff8532d33c46844ba 297 Pfam PF13576 Pentapeptide repeats (9 copies) 148 194 1.7E-7 T 23-04-2016 IPR001646 Pentapeptide repeat UPTC3659_RS00065 f70f913457fb23360c558628c3b6a349 110 SUPERFAMILY SSF46626 36 106 1.96E-12 T 23-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 UPTC3659_RS02225 ea769a72d07ba944f76f7f2f9741ab6e 518 Pfam PF13687 Domain of unknown function (DUF4153) 114 348 7.0E-6 T 23-04-2016 IPR025291 Protein of unknown function DUF4153 UPTC3659_RS05485 a6a4838699ce8b6359795077011eaa09 427 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 190 365 8.4E-12 T 23-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 UPTC3659_RS07095 0c857dd6f084412f8abe3336214282c6 77 Gene3D G3DSA:1.20.5.1000 15 58 3.0E-4 T 23-04-2016 UPTC3659_RS00020 42661ff63cf65dcc62f72a9131d907b8 175 Pfam PF06414 Zeta toxin 2 121 2.5E-5 T 23-04-2016 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 UPTC3659_RS00020 42661ff63cf65dcc62f72a9131d907b8 175 Gene3D G3DSA:3.40.50.300 2 147 9.7E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS00020 42661ff63cf65dcc62f72a9131d907b8 175 SUPERFAMILY SSF52540 1 138 7.96E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase UPTC3659_RS02680 1875db28ddd0d11e1c2938f7c4a4494b 152 Pfam PF06271 RDD family 19 145 1.8E-18 T 23-04-2016 IPR010432 RDD UPTC3659_RS02220 d189ce5539bbb3a605e93caecd2c487e 124 Pfam PF06476 Protein of unknown function (DUF1090) 15 115 2.0E-17 T 23-04-2016 IPR009468 Protein of unknown function DUF1090 UPTC3659_RS00760 64779d7d86c8bbd2f51caf37666dbf05 216 Pfam PF12118 SprA-related family 18 188 6.6E-33 T 23-04-2016 IPR021973 SprA-related family UPTC3659_RS03425 a91f5a1e66a0d30c4b8abaea55c79d42 124 Pfam PF07087 Protein of unknown function (DUF1353) 20 109 1.8E-20 T 23-04-2016 IPR010767 Campylobacter phage CGC-2007, Cje0229 UPTC3659_RS01675 9cd75a87b5e7f3a8d2a147901a84d31b 392 Pfam PF05159 Capsule polysaccharide biosynthesis protein 80 386 6.6E-77 T 23-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 UPTC3659_RS05105 3540ed27b2e804a5bbaf6b03e1de175d 553 Pfam PF15649 Restriction endonuclease fold toxin 7 407 475 1.0E-7 T 23-04-2016 IPR028903 Tox-REase-7 domain UPTC3659_RS03195 ba91883f6ccbb0d8f470852c6ec542f5 59 Gene3D G3DSA:1.10.10.10 21 56 2.7E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain UPTC3659_RS01870 9f0ff364eb1e9319d2890a40e31928fc 67 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 6 27 4.3E-4 T 23-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal