CLA_RS00025	PWY-6610	adenine and adenosine salvage IV
CLA_RS00035	PWY-6700	queuosine biosynthesis
CLA_RS00060	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CLA_RS00060	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CLA_RS00060	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLA_RS00060	PWY-6936	seleno-amino acid biosynthesis
CLA_RS00060	PWY-702	L-methionine biosynthesis II
CLA_RS00065	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CLA_RS00065	PWY-7177	UTP and CTP dephosphorylation II
CLA_RS00065	PWY-7185	UTP and CTP dephosphorylation I
CLA_RS00110	PWY-2201	folate transformations I
CLA_RS00125	PWY-6123	inosine-5'-phosphate biosynthesis I
CLA_RS00125	PWY-6124	inosine-5'-phosphate biosynthesis II
CLA_RS00125	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS00125	PWY-7234	inosine-5'-phosphate biosynthesis III
CLA_RS00130	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLA_RS00130	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLA_RS00130	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLA_RS00130	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLA_RS00130	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS00130	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS00130	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLA_RS00130	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CLA_RS00140	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CLA_RS00210	PWY-5686	UMP biosynthesis
CLA_RS00220	PWY-7039	phosphatidate metabolism, as a signaling molecule
CLA_RS00245	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS00245	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS00245	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS00255	PWY-6854	ethylene biosynthesis III (microbes)
CLA_RS00265	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLA_RS00265	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLA_RS00265	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLA_RS00275	PWY-2941	L-lysine biosynthesis II
CLA_RS00275	PWY-5097	L-lysine biosynthesis VI
CLA_RS00400	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLA_RS00400	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLA_RS00580	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLA_RS00580	PWY-5723	Rubisco shunt
CLA_RS00580	PWY-6891	thiazole biosynthesis II (Bacillus)
CLA_RS00580	PWY-6892	thiazole biosynthesis I (E. coli)
CLA_RS00580	PWY-6901	superpathway of glucose and xylose degradation
CLA_RS00580	PWY-7560	methylerythritol phosphate pathway II
CLA_RS00610	PWY-6854	ethylene biosynthesis III (microbes)
CLA_RS00700	PWY-5392	reductive TCA cycle II
CLA_RS00700	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CLA_RS00700	PWY-5690	TCA cycle II (plants and fungi)
CLA_RS00700	PWY-5913	TCA cycle VI (obligate autotrophs)
CLA_RS00700	PWY-6728	methylaspartate cycle
CLA_RS00700	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLA_RS00700	PWY-7254	TCA cycle VII (acetate-producers)
CLA_RS00700	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CLA_RS00760	PWY-1042	glycolysis IV (plant cytosol)
CLA_RS00760	PWY-1622	formaldehyde assimilation I (serine pathway)
CLA_RS00760	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLA_RS00760	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLA_RS00760	PWY-5723	Rubisco shunt
CLA_RS00760	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLA_RS00760	PWY-6886	1-butanol autotrophic biosynthesis
CLA_RS00760	PWY-6901	superpathway of glucose and xylose degradation
CLA_RS00760	PWY-7003	glycerol degradation to butanol
CLA_RS00760	PWY-7124	ethylene biosynthesis V (engineered)
CLA_RS00760	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLA_RS00780	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLA_RS00780	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLA_RS00800	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLA_RS00845	PWY-6143	CMP-pseudaminate biosynthesis
CLA_RS00880	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CLA_RS00880	PWY-6148	tetrahydromethanopterin biosynthesis
CLA_RS00880	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CLA_RS00880	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CLA_RS00965	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS00975	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS01020	PWY-4381	fatty acid biosynthesis initiation I
CLA_RS01020	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CLA_RS01020	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLA_RS01025	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CLA_RS01025	PWY-6153	autoinducer AI-2 biosynthesis I
CLA_RS01025	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CLA_RS01065	PWY-6825	phosphatidylcholine biosynthesis V
CLA_RS01070	PWY-4381	fatty acid biosynthesis initiation I
CLA_RS01070	PWY-5743	3-hydroxypropanoate cycle
CLA_RS01070	PWY-5744	glyoxylate assimilation
CLA_RS01070	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CLA_RS01070	PWY-6679	jadomycin biosynthesis
CLA_RS01070	PWY-6722	candicidin biosynthesis
CLA_RS01070	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLA_RS01080	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CLA_RS01090	PWY-2201	folate transformations I
CLA_RS01090	PWY-5497	purine nucleobases degradation II (anaerobic)
CLA_RS01100	PWY-702	L-methionine biosynthesis II
CLA_RS01135	PWY-5525	D-glucuronate degradation I
CLA_RS01150	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLA_RS01150	PWY-6416	quinate degradation II
CLA_RS01150	PWY-6707	gallate biosynthesis
CLA_RS01160	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CLA_RS01160	PWY-6148	tetrahydromethanopterin biosynthesis
CLA_RS01160	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CLA_RS01160	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CLA_RS01210	PWY-5269	cardiolipin biosynthesis II
CLA_RS01210	PWY-5668	cardiolipin biosynthesis I
CLA_RS01215	PWY-5278	sulfite oxidation III
CLA_RS01215	PWY-5340	sulfate activation for sulfonation
CLA_RS01215	PWY-6683	sulfate reduction III (assimilatory)
CLA_RS01215	PWY-6932	selenate reduction
CLA_RS01225	PWY-7560	methylerythritol phosphate pathway II
CLA_RS01245	PWY-3801	sucrose degradation II (sucrose synthase)
CLA_RS01245	PWY-5054	sorbitol biosynthesis I
CLA_RS01245	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CLA_RS01245	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CLA_RS01245	PWY-5659	GDP-mannose biosynthesis
CLA_RS01245	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLA_RS01245	PWY-621	sucrose degradation III (sucrose invertase)
CLA_RS01245	PWY-622	starch biosynthesis
CLA_RS01245	PWY-6981	chitin biosynthesis
CLA_RS01245	PWY-6992	1,5-anhydrofructose degradation
CLA_RS01245	PWY-7238	sucrose biosynthesis II
CLA_RS01245	PWY-7347	sucrose biosynthesis III
CLA_RS01245	PWY-7385	1,3-propanediol biosynthesis (engineered)
CLA_RS01250	PWY-3801	sucrose degradation II (sucrose synthase)
CLA_RS01250	PWY-6527	stachyose degradation
CLA_RS01250	PWY-7238	sucrose biosynthesis II
CLA_RS01250	PWY-7343	UDP-glucose biosynthesis
CLA_RS01280	PWY-6749	CMP-legionaminate biosynthesis I
CLA_RS01330	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLA_RS01330	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLA_RS01335	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLA_RS01335	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CLA_RS01335	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLA_RS01340	PWY-1042	glycolysis IV (plant cytosol)
CLA_RS01340	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLA_RS01340	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLA_RS01340	PWY-5723	Rubisco shunt
CLA_RS01340	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLA_RS01340	PWY-6886	1-butanol autotrophic biosynthesis
CLA_RS01340	PWY-6901	superpathway of glucose and xylose degradation
CLA_RS01340	PWY-7003	glycerol degradation to butanol
CLA_RS01340	PWY-7124	ethylene biosynthesis V (engineered)
CLA_RS01340	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLA_RS01345	PWY-5367	petroselinate biosynthesis
CLA_RS01345	PWY-5515	L-arabinose degradation II
CLA_RS01345	PWY-5525	D-glucuronate degradation I
CLA_RS01345	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CLA_RS01345	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CLA_RS01345	PWY-5989	stearate biosynthesis II (bacteria and plants)
CLA_RS01345	PWY-5994	palmitate biosynthesis I (animals and fungi)
CLA_RS01345	PWY-6113	superpathway of mycolate biosynthesis
CLA_RS01345	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CLA_RS01345	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CLA_RS01345	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLA_RS01345	PWY-7663	gondoate biosynthesis (anaerobic)
CLA_RS01345	PWY-7664	oleate biosynthesis IV (anaerobic)
CLA_RS01345	PWYG-321	mycolate biosynthesis
CLA_RS01350	PWY-6012	acyl carrier protein metabolism I
CLA_RS01350	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CLA_RS01375	PWY-4983	L-citrulline-nitric oxide cycle
CLA_RS01375	PWY-4984	urea cycle
CLA_RS01375	PWY-5	canavanine biosynthesis
CLA_RS01375	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLA_RS01375	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLA_RS01395	PWY-6936	seleno-amino acid biosynthesis
CLA_RS01400	PWY-6123	inosine-5'-phosphate biosynthesis I
CLA_RS01400	PWY-6124	inosine-5'-phosphate biosynthesis II
CLA_RS01400	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS01400	PWY-7234	inosine-5'-phosphate biosynthesis III
CLA_RS01420	PWY-6899	base-degraded thiamin salvage
CLA_RS01420	PWY-7356	thiamin salvage IV (yeast)
CLA_RS01435	PWY-4381	fatty acid biosynthesis initiation I
CLA_RS01435	PWY-5743	3-hydroxypropanoate cycle
CLA_RS01435	PWY-5744	glyoxylate assimilation
CLA_RS01435	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CLA_RS01435	PWY-6679	jadomycin biosynthesis
CLA_RS01435	PWY-6722	candicidin biosynthesis
CLA_RS01435	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLA_RS01665	PWY-3781	aerobic respiration I (cytochrome c)
CLA_RS01665	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CLA_RS01665	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CLA_RS01665	PWY-5690	TCA cycle II (plants and fungi)
CLA_RS01665	PWY-6728	methylaspartate cycle
CLA_RS01665	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLA_RS01665	PWY-7254	TCA cycle VII (acetate-producers)
CLA_RS01665	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CLA_RS01670	PWY-3781	aerobic respiration I (cytochrome c)
CLA_RS01670	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CLA_RS01670	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CLA_RS01670	PWY-5690	TCA cycle II (plants and fungi)
CLA_RS01670	PWY-6728	methylaspartate cycle
CLA_RS01670	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLA_RS01670	PWY-7254	TCA cycle VII (acetate-producers)
CLA_RS01670	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CLA_RS01690	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CLA_RS01690	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CLA_RS01745	PWY-6823	molybdenum cofactor biosynthesis
CLA_RS01750	PWY-6823	molybdenum cofactor biosynthesis
CLA_RS01765	PWY-6562	norspermidine biosynthesis
CLA_RS01810	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CLA_RS01815	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CLA_RS01815	PWY-6853	ethylene biosynthesis II (microbes)
CLA_RS01815	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CLA_RS01840	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS01860	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLA_RS01860	PWY-5686	UMP biosynthesis
CLA_RS01860	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLA_RS01870	PWY-3781	aerobic respiration I (cytochrome c)
CLA_RS01870	PWY-4521	arsenite oxidation I (respiratory)
CLA_RS01870	PWY-6692	Fe(II) oxidation
CLA_RS01870	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CLA_RS01875	PWY-3781	aerobic respiration I (cytochrome c)
CLA_RS01875	PWY-4521	arsenite oxidation I (respiratory)
CLA_RS01875	PWY-6692	Fe(II) oxidation
CLA_RS01875	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CLA_RS02005	PWY-6825	phosphatidylcholine biosynthesis V
CLA_RS02025	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CLA_RS02025	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CLA_RS02025	PWY-6896	thiamin salvage I
CLA_RS02025	PWY-6897	thiamin salvage II
CLA_RS02075	PWY-1042	glycolysis IV (plant cytosol)
CLA_RS02075	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLA_RS02075	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLA_RS02075	PWY-7003	glycerol degradation to butanol
CLA_RS02080	PWY-1042	glycolysis IV (plant cytosol)
CLA_RS02080	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLA_RS02080	PWY-6886	1-butanol autotrophic biosynthesis
CLA_RS02080	PWY-6901	superpathway of glucose and xylose degradation
CLA_RS02080	PWY-7003	glycerol degradation to butanol
CLA_RS02085	PWY-1042	glycolysis IV (plant cytosol)
CLA_RS02085	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLA_RS02085	PWY-6901	superpathway of glucose and xylose degradation
CLA_RS02085	PWY-7003	glycerol degradation to butanol
CLA_RS02090	PWY-5381	pyridine nucleotide cycling (plants)
CLA_RS02090	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CLA_RS02120	PWY-5392	reductive TCA cycle II
CLA_RS02120	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CLA_RS02120	PWY-5690	TCA cycle II (plants and fungi)
CLA_RS02120	PWY-5913	TCA cycle VI (obligate autotrophs)
CLA_RS02120	PWY-6728	methylaspartate cycle
CLA_RS02120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CLA_RS02120	PWY-7254	TCA cycle VII (acetate-producers)
CLA_RS02120	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CLA_RS02125	PWY-6749	CMP-legionaminate biosynthesis I
CLA_RS02135	PWY-5198	factor 420 biosynthesis
CLA_RS02135	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CLA_RS02135	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CLA_RS02350	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS02385	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CLA_RS02390	PWY-1042	glycolysis IV (plant cytosol)
CLA_RS02390	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLA_RS02390	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLA_RS02390	PWY-5723	Rubisco shunt
CLA_RS02390	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLA_RS02390	PWY-6886	1-butanol autotrophic biosynthesis
CLA_RS02390	PWY-6901	superpathway of glucose and xylose degradation
CLA_RS02390	PWY-7003	glycerol degradation to butanol
CLA_RS02390	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLA_RS02390	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLA_RS02395	PWY-7254	TCA cycle VII (acetate-producers)
CLA_RS02400	PWY-3961	phosphopantothenate biosynthesis II
CLA_RS02440	PWY-1622	formaldehyde assimilation I (serine pathway)
CLA_RS02440	PWY-181	photorespiration
CLA_RS02440	PWY-2161	folate polyglutamylation
CLA_RS02440	PWY-2201	folate transformations I
CLA_RS02440	PWY-3661	glycine betaine degradation I
CLA_RS02440	PWY-3661-1	glycine betaine degradation II (mammalian)
CLA_RS02440	PWY-3841	folate transformations II
CLA_RS02440	PWY-5497	purine nucleobases degradation II (anaerobic)
CLA_RS02455	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLA_RS02500	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS02515	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLA_RS02515	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLA_RS02515	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLA_RS02630	PWY-2941	L-lysine biosynthesis II
CLA_RS02630	PWY-2942	L-lysine biosynthesis III
CLA_RS02630	PWY-5097	L-lysine biosynthesis VI
CLA_RS02630	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLA_RS02630	PWY-6559	spermidine biosynthesis II
CLA_RS02630	PWY-6562	norspermidine biosynthesis
CLA_RS02630	PWY-7153	grixazone biosynthesis
CLA_RS02630	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLA_RS02640	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CLA_RS02640	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CLA_RS02660	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CLA_RS02670	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLA_RS02690	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLA_RS02690	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CLA_RS02695	PWY-6167	flavin biosynthesis II (archaea)
CLA_RS02695	PWY-6168	flavin biosynthesis III (fungi)
CLA_RS02705	PWY-5686	UMP biosynthesis
CLA_RS02720	PWY-6123	inosine-5'-phosphate biosynthesis I
CLA_RS02720	PWY-6124	inosine-5'-phosphate biosynthesis II
CLA_RS02720	PWY-7234	inosine-5'-phosphate biosynthesis III
CLA_RS02730	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLA_RS02730	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLA_RS02730	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLA_RS02860	PWY-5669	phosphatidylethanolamine biosynthesis I
CLA_RS02890	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLA_RS02900	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CLA_RS02900	PWY-2201	folate transformations I
CLA_RS02900	PWY-3841	folate transformations II
CLA_RS02900	PWY-5030	L-histidine degradation III
CLA_RS02900	PWY-5497	purine nucleobases degradation II (anaerobic)
CLA_RS02900	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CLA_RS02915	PWY-6700	queuosine biosynthesis
CLA_RS02980	PWY-6004	glycine betaine biosynthesis V (from glycine)
CLA_RS03015	PWY-6167	flavin biosynthesis II (archaea)
CLA_RS03015	PWY-6168	flavin biosynthesis III (fungi)
CLA_RS03015	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CLA_RS03090	PWY-723	alkylnitronates degradation
CLA_RS03115	PWY-5269	cardiolipin biosynthesis II
CLA_RS03115	PWY-5668	cardiolipin biosynthesis I
CLA_RS03125	PWY-2941	L-lysine biosynthesis II
CLA_RS03125	PWY-2942	L-lysine biosynthesis III
CLA_RS03125	PWY-5097	L-lysine biosynthesis VI
CLA_RS03135	PWY-5686	UMP biosynthesis
CLA_RS03165	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLA_RS03165	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLA_RS03190	PWY-1281	sulfoacetaldehyde degradation I
CLA_RS03190	PWY-5482	pyruvate fermentation to acetate II
CLA_RS03190	PWY-5485	pyruvate fermentation to acetate IV
CLA_RS03190	PWY-5497	purine nucleobases degradation II (anaerobic)
CLA_RS03190	PWY-6637	sulfolactate degradation II
CLA_RS03195	PWY-5482	pyruvate fermentation to acetate II
CLA_RS03195	PWY-5485	pyruvate fermentation to acetate IV
CLA_RS03195	PWY-5497	purine nucleobases degradation II (anaerobic)
CLA_RS03235	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS03245	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CLA_RS03245	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CLA_RS03245	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CLA_RS03275	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLA_RS03275	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CLA_RS03305	PWY-6700	queuosine biosynthesis
CLA_RS03340	PWY-2941	L-lysine biosynthesis II
CLA_RS03340	PWY-2942	L-lysine biosynthesis III
CLA_RS03340	PWY-5097	L-lysine biosynthesis VI
CLA_RS03340	PWY-6559	spermidine biosynthesis II
CLA_RS03340	PWY-6562	norspermidine biosynthesis
CLA_RS03340	PWY-7153	grixazone biosynthesis
CLA_RS03355	PWY-6614	tetrahydrofolate biosynthesis
CLA_RS03370	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CLA_RS03370	PWY-6167	flavin biosynthesis II (archaea)
CLA_RS03370	PWY-6168	flavin biosynthesis III (fungi)
CLA_RS03395	PWY-6605	adenine and adenosine salvage II
CLA_RS03395	PWY-6610	adenine and adenosine salvage IV
CLA_RS03425	PWY-5198	factor 420 biosynthesis
CLA_RS03425	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CLA_RS03425	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CLA_RS03475	PWY-6164	3-dehydroquinate biosynthesis I
CLA_RS03520	PWY-5667	CDP-diacylglycerol biosynthesis I
CLA_RS03520	PWY-5981	CDP-diacylglycerol biosynthesis III
CLA_RS03520	PWY-6453	stigma estolide biosynthesis
CLA_RS03520	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CLA_RS03520	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CLA_RS03520	PWY-7587	oleate biosynthesis III (cyanobacteria)
CLA_RS03520	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
CLA_RS03530	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLA_RS03530	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLA_RS03530	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLA_RS03535	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLA_RS03535	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLA_RS03535	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLA_RS03540	PWY-6123	inosine-5'-phosphate biosynthesis I
CLA_RS03540	PWY-6124	inosine-5'-phosphate biosynthesis II
CLA_RS03540	PWY-7234	inosine-5'-phosphate biosynthesis III
CLA_RS03580	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLA_RS03600	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLA_RS03630	PWY-6703	preQ<sub>0</sub> biosynthesis
CLA_RS03665	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLA_RS03665	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLA_RS03675	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLA_RS03675	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLA_RS03680	PWY-6823	molybdenum cofactor biosynthesis
CLA_RS03715	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLA_RS03715	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLA_RS03715	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS03715	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CLA_RS03715	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLA_RS03715	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLA_RS03725	PWY-40	putrescine biosynthesis I
CLA_RS03725	PWY-43	putrescine biosynthesis II
CLA_RS03725	PWY-6305	putrescine biosynthesis IV
CLA_RS03725	PWY-6834	spermidine biosynthesis III
CLA_RS03730	PWY-6936	seleno-amino acid biosynthesis
CLA_RS03730	PWY-7274	D-cycloserine biosynthesis
CLA_RS03735	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CLA_RS03735	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CLA_RS03735	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CLA_RS03735	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CLA_RS03740	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLA_RS03765	PWY-4983	L-citrulline-nitric oxide cycle
CLA_RS03765	PWY-4984	urea cycle
CLA_RS03765	PWY-5	canavanine biosynthesis
CLA_RS03765	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLA_RS03765	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLA_RS03825	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CLA_RS03825	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CLA_RS03825	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CLA_RS03825	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CLA_RS03825	PWY-6978	plastoquinol-9 biosynthesis II
CLA_RS03830	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLA_RS03830	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CLA_RS03845	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLA_RS04025	PWY-5674	nitrate reduction IV (dissimilatory)
CLA_RS04055	PWY-5101	L-isoleucine biosynthesis II
CLA_RS04055	PWY-5103	L-isoleucine biosynthesis III
CLA_RS04055	PWY-5104	L-isoleucine biosynthesis IV
CLA_RS04055	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CLA_RS04055	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CLA_RS04055	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CLA_RS04055	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLA_RS04060	PWY-5101	L-isoleucine biosynthesis II
CLA_RS04060	PWY-5103	L-isoleucine biosynthesis III
CLA_RS04060	PWY-5104	L-isoleucine biosynthesis IV
CLA_RS04060	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CLA_RS04060	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CLA_RS04060	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CLA_RS04060	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLA_RS04360	PWY-43	putrescine biosynthesis II
CLA_RS04470	PWY-43	putrescine biosynthesis II
CLA_RS04500	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLA_RS04550	PWY-1042	glycolysis IV (plant cytosol)
CLA_RS04550	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLA_RS04550	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLA_RS04550	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLA_RS04550	PWY-7385	1,3-propanediol biosynthesis (engineered)
CLA_RS04635	PWY-7294	xylose degradation IV
CLA_RS04635	PWY-7295	L-arabinose degradation IV
CLA_RS04705	PWY-6825	phosphatidylcholine biosynthesis V
CLA_RS04725	PWY-5103	L-isoleucine biosynthesis III
CLA_RS04725	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLA_RS04775	PWY-3341	L-proline biosynthesis III
CLA_RS04775	PWY-4981	L-proline biosynthesis II (from arginine)
CLA_RS04775	PWY-6344	L-ornithine degradation II (Stickland reaction)
CLA_RS04890	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CLA_RS04890	PWY-5667	CDP-diacylglycerol biosynthesis I
CLA_RS04890	PWY-6453	stigma estolide biosynthesis
CLA_RS04890	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CLA_RS04890	PWY-7587	oleate biosynthesis III (cyanobacteria)
CLA_RS04905	PWY-5958	acridone alkaloid biosynthesis
CLA_RS04905	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CLA_RS04905	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CLA_RS04910	PWY-5958	acridone alkaloid biosynthesis
CLA_RS04910	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CLA_RS04910	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CLA_RS04935	PWY-6164	3-dehydroquinate biosynthesis I
CLA_RS04950	PWY-6829	tRNA methylation (yeast)
CLA_RS04950	PWY-7285	methylwyosine biosynthesis
CLA_RS04950	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CLA_RS04980	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CLA_RS05005	PWY-6123	inosine-5'-phosphate biosynthesis I
CLA_RS05005	PWY-7234	inosine-5'-phosphate biosynthesis III
CLA_RS05020	PWY-381	nitrate reduction II (assimilatory)
CLA_RS05020	PWY-5675	nitrate reduction V (assimilatory)
CLA_RS05020	PWY-6549	L-glutamine biosynthesis III
CLA_RS05020	PWY-6963	ammonia assimilation cycle I
CLA_RS05020	PWY-6964	ammonia assimilation cycle II
CLA_RS05025	PWY-2201	folate transformations I
CLA_RS05025	PWY-5497	purine nucleobases degradation II (anaerobic)
CLA_RS05105	PWY-5674	nitrate reduction IV (dissimilatory)
CLA_RS05110	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CLA_RS05120	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLA_RS05120	PWY-5723	Rubisco shunt
CLA_RS05190	PWY-2161	folate polyglutamylation
CLA_RS05235	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CLA_RS05235	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CLA_RS05245	PWY-5686	UMP biosynthesis
CLA_RS05275	PWY-7560	methylerythritol phosphate pathway II
CLA_RS05430	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS05480	PWY-6167	flavin biosynthesis II (archaea)
CLA_RS05480	PWY-6168	flavin biosynthesis III (fungi)
CLA_RS05480	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS05585	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLA_RS05585	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CLA_RS05590	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CLA_RS05590	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CLA_RS05590	PWY-6897	thiamin salvage II
CLA_RS05590	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CLA_RS05590	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CLA_RS05590	PWY-7356	thiamin salvage IV (yeast)
CLA_RS05590	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLA_RS05595	PWY-6897	thiamin salvage II
CLA_RS05595	PWY-7356	thiamin salvage IV (yeast)
CLA_RS05595	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLA_RS05600	PWY-6910	hydroxymethylpyrimidine salvage
CLA_RS05600	PWY-7356	thiamin salvage IV (yeast)
CLA_RS05600	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLA_RS05620	PWY-6168	flavin biosynthesis III (fungi)
CLA_RS05620	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CLA_RS05625	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLA_RS05625	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CLA_RS05650	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CLA_RS05710	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CLA_RS05710	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CLA_RS05710	PWY-6897	thiamin salvage II
CLA_RS05710	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CLA_RS05710	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CLA_RS05710	PWY-7356	thiamin salvage IV (yeast)
CLA_RS05710	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CLA_RS05715	PWY-6892	thiazole biosynthesis I (E. coli)
CLA_RS05715	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLA_RS05720	PWY-6891	thiazole biosynthesis II (Bacillus)
CLA_RS05720	PWY-6892	thiazole biosynthesis I (E. coli)
CLA_RS05765	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CLA_RS05765	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CLA_RS05780	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLA_RS05780	PWY-6596	adenosine nucleotides degradation I
CLA_RS05780	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS05785	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CLA_RS05860	PWY-2201	folate transformations I
CLA_RS05885	PWY-5381	pyridine nucleotide cycling (plants)
CLA_RS05945	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLA_RS05965	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CLA_RS05965	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CLA_RS06015	PWY-5667	CDP-diacylglycerol biosynthesis I
CLA_RS06015	PWY-5981	CDP-diacylglycerol biosynthesis III
CLA_RS06105	PWY-6936	seleno-amino acid biosynthesis
CLA_RS06130	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLA_RS06160	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
CLA_RS06160	PWY-6749	CMP-legionaminate biosynthesis I
CLA_RS06160	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
CLA_RS06160	PWY-7102	bisabolene biosynthesis
CLA_RS06160	PWY-7131	CMP-legionaminate biosynthesis II
CLA_RS06160	PWY-7721	CLA_RS06160
CLA_RS06160	PWY-7736	CLA_RS06160
CLA_RS06235	PWY-3821	galactose degradation III
CLA_RS06235	PWY-6317	galactose degradation I (Leloir pathway)
CLA_RS06235	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CLA_RS06235	PWY-6527	stachyose degradation
CLA_RS06235	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CLA_RS06235	PWY-7344	UDP-D-galactose biosynthesis
CLA_RS06300	PWY-5669	phosphatidylethanolamine biosynthesis I
CLA_RS06305	PWY-5669	phosphatidylethanolamine biosynthesis I
CLA_RS06370	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CLA_RS06435	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CLA_RS06435	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CLA_RS06445	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CLA_RS06465	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS06470	PWY-1042	glycolysis IV (plant cytosol)
CLA_RS06470	PWY-1622	formaldehyde assimilation I (serine pathway)
CLA_RS06470	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CLA_RS06470	PWY-5484	glycolysis II (from fructose 6-phosphate)
CLA_RS06470	PWY-5723	Rubisco shunt
CLA_RS06470	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLA_RS06470	PWY-6143	CMP-pseudaminate biosynthesis
CLA_RS06470	PWY-6886	1-butanol autotrophic biosynthesis
CLA_RS06470	PWY-6901	superpathway of glucose and xylose degradation
CLA_RS06470	PWY-7003	glycerol degradation to butanol
CLA_RS06470	PWY-7124	ethylene biosynthesis V (engineered)
CLA_RS06470	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CLA_RS06470	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
CLA_RS06470	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
CLA_RS06470	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
CLA_RS06470	PWY-7719	CLA_RS06470
CLA_RS06505	PWY-4381	fatty acid biosynthesis initiation I
CLA_RS06545	PWY-4381	fatty acid biosynthesis initiation I
CLA_RS06575	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CLA_RS06575	PWY-6143	CMP-pseudaminate biosynthesis
CLA_RS06645	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLA_RS06645	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CLA_RS06645	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLA_RS06645	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS06645	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CLA_RS06645	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLA_RS06645	PWY-7205	CMP phosphorylation
CLA_RS06645	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLA_RS06645	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS06645	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS06645	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS06645	PWY-7224	purine deoxyribonucleosides salvage
CLA_RS06645	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLA_RS06645	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CLA_RS06665	PWY-4381	fatty acid biosynthesis initiation I
CLA_RS06735	PWY-5839	menaquinol-7 biosynthesis
CLA_RS06735	PWY-5844	menaquinol-9 biosynthesis
CLA_RS06735	PWY-5849	menaquinol-6 biosynthesis
CLA_RS06735	PWY-5890	menaquinol-10 biosynthesis
CLA_RS06735	PWY-5891	menaquinol-11 biosynthesis
CLA_RS06735	PWY-5892	menaquinol-12 biosynthesis
CLA_RS06735	PWY-5895	menaquinol-13 biosynthesis
CLA_RS06750	PWY-6891	thiazole biosynthesis II (Bacillus)
CLA_RS06750	PWY-6892	thiazole biosynthesis I (E. coli)
CLA_RS06750	PWY-7560	methylerythritol phosphate pathway II
CLA_RS06775	PWY-3461	L-tyrosine biosynthesis II
CLA_RS06775	PWY-3462	L-phenylalanine biosynthesis II
CLA_RS06775	PWY-6120	L-tyrosine biosynthesis III
CLA_RS06775	PWY-6627	salinosporamide A biosynthesis
CLA_RS06775	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CLA_RS06775	PWY-7626	bacilysin biosynthesis
CLA_RS06785	PWY-2941	L-lysine biosynthesis II
CLA_RS06785	PWY-2942	L-lysine biosynthesis III
CLA_RS06785	PWY-5097	L-lysine biosynthesis VI
CLA_RS06795	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CLA_RS06805	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CLA_RS06805	PWY-5723	Rubisco shunt
CLA_RS06840	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CLA_RS06840	PWY-622	starch biosynthesis
CLA_RS06880	PWY-5381	pyridine nucleotide cycling (plants)
CLA_RS06880	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CLA_RS06880	PWY-6596	adenosine nucleotides degradation I
CLA_RS06880	PWY-6606	guanosine nucleotides degradation II
CLA_RS06880	PWY-6607	guanosine nucleotides degradation I
CLA_RS06880	PWY-6608	guanosine nucleotides degradation III
CLA_RS06880	PWY-7185	UTP and CTP dephosphorylation I
CLA_RS06925	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CLA_RS06950	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CLA_RS06950	PWY-5686	UMP biosynthesis
CLA_RS06950	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CLA_RS06975	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CLA_RS06975	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CLA_RS06975	PWY-5989	stearate biosynthesis II (bacteria and plants)
CLA_RS06975	PWY-5994	palmitate biosynthesis I (animals and fungi)
CLA_RS06975	PWY-6113	superpathway of mycolate biosynthesis
CLA_RS06975	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CLA_RS06975	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CLA_RS06975	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CLA_RS06975	PWY-7663	gondoate biosynthesis (anaerobic)
CLA_RS06975	PWY-7664	oleate biosynthesis IV (anaerobic)
CLA_RS06975	PWYG-321	mycolate biosynthesis
CLA_RS06995	PWY-5057	L-valine degradation II
CLA_RS06995	PWY-5076	L-leucine degradation III
CLA_RS06995	PWY-5078	L-isoleucine degradation II
CLA_RS06995	PWY-5101	L-isoleucine biosynthesis II
CLA_RS06995	PWY-5103	L-isoleucine biosynthesis III
CLA_RS06995	PWY-5104	L-isoleucine biosynthesis IV
CLA_RS06995	PWY-5108	L-isoleucine biosynthesis V
CLA_RS07015	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLA_RS07015	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CLA_RS07015	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CLA_RS07015	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CLA_RS07020	PWY-2941	L-lysine biosynthesis II
CLA_RS07020	PWY-2942	L-lysine biosynthesis III
CLA_RS07020	PWY-5097	L-lysine biosynthesis VI
CLA_RS07070	PWY-2201	folate transformations I
CLA_RS07080	PWY-2201	folate transformations I
CLA_RS07100	PWY-6703	preQ<sub>0</sub> biosynthesis
CLA_RS07105	PWY-6823	molybdenum cofactor biosynthesis
CLA_RS07125	PWY-2781	<i>cis</i>-zeatin biosynthesis
CLA_RS07335	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CLA_RS07335	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CLA_RS07340	PWY-6938	NADH repair
CLA_RS07380	PWY-5663	tetrahydrobiopterin biosynthesis I
CLA_RS07380	PWY-5664	tetrahydrobiopterin biosynthesis II
CLA_RS07380	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CLA_RS07380	PWY-6703	preQ<sub>0</sub> biosynthesis
CLA_RS07380	PWY-6983	tetrahydrobiopterin biosynthesis III
CLA_RS07380	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CLA_RS07385	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CLA_RS07405	PWY-6823	molybdenum cofactor biosynthesis
CLA_RS07405	PWY-6891	thiazole biosynthesis II (Bacillus)
CLA_RS07405	PWY-6892	thiazole biosynthesis I (E. coli)
CLA_RS07405	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CLA_RS07440	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CLA_RS07500	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CLA_RS07500	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CLA_RS07500	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CLA_RS07500	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CLA_RS07520	PWY-5686	UMP biosynthesis
CLA_RS07530	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CLA_RS07530	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLA_RS07530	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CLA_RS07530	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CLA_RS07530	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS07530	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CLA_RS07530	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CLA_RS07530	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CLA_RS07650	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CLA_RS07650	PWY-5368	dimorphecolate biosynthesis
CLA_RS07650	PWY-5995	linoleate biosynthesis I (plants)
CLA_RS07650	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CLA_RS07650	PWY-6803	phosphatidylcholine acyl editing
CLA_RS07650	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CLA_RS07650	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CLA_RS07650	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CLA_RS07650	PWY-7470	phosphatidylcholine biosynthesis VII
CLA_RS07650	PWY-7618	ricinoleate biosynthesis
CLA_RS07660	PWY-7294	xylose degradation IV
CLA_RS07660	PWY-7295	L-arabinose degradation IV
CLA_RS07660	PWY-7560	methylerythritol phosphate pathway II
CLA_RS07665	PWY-5667	CDP-diacylglycerol biosynthesis I
CLA_RS07665	PWY-5981	CDP-diacylglycerol biosynthesis III
CLA_RS07680	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CLA_RS07680	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
CLA_RS07690	PWY-5101	L-isoleucine biosynthesis II
CLA_RS07690	PWY-5103	L-isoleucine biosynthesis III
CLA_RS07690	PWY-5104	L-isoleucine biosynthesis IV
CLA_RS07690	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CLA_RS07820	PWY-6749	CMP-legionaminate biosynthesis I
