CLA_RS00010 PF00308 Bacterial dnaA protein CLA_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix CLA_RS00010 PF11638 DnaA N-terminal domain CLA_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain CLA_RS00015 PF02767 DNA polymerase III beta subunit, central domain CLA_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain CLA_RS00020 PF00204 DNA gyrase B CLA_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CLA_RS00020 PF01751 Toprim domain CLA_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLA_RS00025 PF00962 Adenosine/AMP deaminase CLA_RS00030 PF05066 HB1, ASXL, restriction endonuclease HTH domain CLA_RS00035 PF14489 QueF-like protein CLA_RS00040 PF00174 Oxidoreductase molybdopterin binding domain CLA_RS00040 PF03404 Mo-co oxidoreductase dimerisation domain CLA_RS00050 PF13505 Outer membrane protein beta-barrel domain CLA_RS00055 PF03831 PhnA protein CLA_RS00060 PF02511 Thymidylate synthase complementing protein CLA_RS00065 PF00117 Glutamine amidotransferase class-I CLA_RS00065 PF06418 CTP synthase N-terminus CLA_RS00070 PF01368 DHH family CLA_RS00070 PF02272 DHHA1 domain CLA_RS00080 PF00472 RF-1 domain CLA_RS00080 PF03462 PCRF domain CLA_RS00085 PF01649 Ribosomal protein S20 CLA_RS00090 PF00849 RNA pseudouridylate synthase CLA_RS00090 PF01479 S4 domain CLA_RS00095 PF00753 Metallo-beta-lactamase superfamily CLA_RS00095 PF07521 RNA-metabolising metallo-beta-lactamase CLA_RS00100 PF00398 Ribosomal RNA adenine dimethylase CLA_RS00110 PF04055 Radical SAM superfamily CLA_RS00115 PF13394 4Fe-4S single cluster domain CLA_RS00120 PF00849 RNA pseudouridylate synthase CLA_RS00125 PF00206 Lyase CLA_RS00125 PF10397 Adenylosuccinate lyase C-terminus CLA_RS00130 PF00317 Ribonucleotide reductase, all-alpha domain CLA_RS00130 PF02867 Ribonucleotide reductase, barrel domain CLA_RS00130 PF03477 ATP cone domain CLA_RS00135 PF03169 CLA_RS00135 CLA_RS00140 PF02673 CLA_RS00140 CLA_RS00145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLA_RS00145 PF03129 Anticodon binding domain CLA_RS00145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLA_RS00150 PF00707 Translation initiation factor IF-3, C-terminal domain CLA_RS00150 PF05198 Translation initiation factor IF-3, N-terminal domain CLA_RS00155 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLA_RS00160 PF08279 HTH domain CLA_RS00160 PF13280 CLA_RS00160 CLA_RS00170 PF03382 CLA_RS00170 CLA_RS00170 PF07728 AAA domain (dynein-related subfamily) CLA_RS00175 PF01632 Ribosomal protein L35 CLA_RS00180 PF00453 Ribosomal protein L20 CLA_RS00185 PF01068 ATP dependent DNA ligase domain CLA_RS00185 PF14743 DNA ligase OB-like domain CLA_RS00190 PF00950 CLA_RS00190 CLA_RS00195 PF00005 ABC transporter CLA_RS00200 PF01297 Periplasmic solute binding protein family CLA_RS00205 PF13649 Methyltransferase domain CLA_RS00210 PF01979 Amidohydrolase family CLA_RS00215 PF05732 CLA_RS00215 CLA_RS00220 PF01219 Prokaryotic diacylglycerol kinase CLA_RS00225 PF00884 Sulfatase CLA_RS00225 PF08019 CLA_RS00225 CLA_RS00230 PF03372 Endonuclease/Exonuclease/phosphatase family CLA_RS00240 PF03382 CLA_RS00240 CLA_RS00245 PF03477 ATP cone domain CLA_RS00245 PF13597 Anaerobic ribonucleoside-triphosphate reductase CLA_RS00250 PF04055 Radical SAM superfamily CLA_RS00250 PF13353 4Fe-4S single cluster domain CLA_RS00255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CLA_RS00255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CLA_RS00260 PF03606 CLA_RS00260 CLA_RS00265 PF00586 AIR synthase related protein, N-terminal domain CLA_RS00265 PF02769 AIR synthase related protein, C-terminal domain CLA_RS00270 PF01121 Dephospho-CoA kinase CLA_RS00275 PF01678 Diaminopimelate epimerase CLA_RS00280 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CLA_RS00295 PF00338 Ribosomal protein S10p/S20e CLA_RS00300 PF00297 Ribosomal protein L3 CLA_RS00305 PF00573 Ribosomal protein L4/L1 family CLA_RS00310 PF00276 Ribosomal protein L23 CLA_RS00315 PF00181 Ribosomal Proteins L2, RNA binding domain CLA_RS00315 PF03947 Ribosomal Proteins L2, C-terminal domain CLA_RS00320 PF00203 Ribosomal protein S19 CLA_RS00325 PF00237 Ribosomal protein L22p/L17e CLA_RS00330 PF00189 Ribosomal protein S3, C-terminal domain CLA_RS00330 PF07650 KH domain CLA_RS00335 PF00252 Ribosomal protein L16p/L10e CLA_RS00340 PF00831 Ribosomal L29 protein CLA_RS00345 PF00366 Ribosomal protein S17 CLA_RS00350 PF00238 Ribosomal protein L14p/L23e CLA_RS00355 PF00467 KOW motif CLA_RS00355 PF17136 CLA_RS00355 CLA_RS00360 PF00281 Ribosomal protein L5 CLA_RS00360 PF00673 ribosomal L5P family C-terminus CLA_RS00365 PF00253 Ribosomal protein S14p/S29e CLA_RS00370 PF00410 Ribosomal protein S8 CLA_RS00375 PF00347 Ribosomal protein L6 CLA_RS00380 PF00861 Ribosomal L18p/L5e family CLA_RS00385 PF00333 Ribosomal protein S5, N-terminal domain CLA_RS00385 PF03719 Ribosomal protein S5, C-terminal domain CLA_RS00390 PF00828 Ribosomal protein L18e/L15 CLA_RS00395 PF00344 SecY translocase CLA_RS00400 PF01177 Asp/Glu/Hydantoin racemase CLA_RS00405 PF00710 Asparaginase CLA_RS00410 PF02915 Rubrerythrin CLA_RS00410 PF06397 Desulfoferrodoxin, N-terminal domain CLA_RS00415 PF03167 Uracil DNA glycosylase superfamily CLA_RS00420 PF01351 Ribonuclease HII CLA_RS00425 PF03222 Tryptophan/tyrosine permease family CLA_RS00430 PF03313 CLA_RS00430 CLA_RS00430 PF03315 Serine dehydratase beta chain CLA_RS00435 PF00557 Metallopeptidase family M24 CLA_RS00440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS00445 PF00034 Cytochrome c CLA_RS00445 PF03150 Di-haem cytochrome c peroxidase CLA_RS00450 PF07690 Major Facilitator Superfamily CLA_RS00455 PF01176 Translation initiation factor 1A / IF-1 CLA_RS00460 PF00416 Ribosomal protein S13/S18 CLA_RS00465 PF00411 Ribosomal protein S11 CLA_RS00470 PF00163 Ribosomal protein S4/S9 N-terminal domain CLA_RS00470 PF01479 S4 domain CLA_RS00475 PF01000 RNA polymerase Rpb3/RpoA insert domain CLA_RS00475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CLA_RS00475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CLA_RS00480 PF01196 Ribosomal protein L17 CLA_RS00485 PF01634 ATP phosphoribosyltransferase CLA_RS00485 PF08029 HisG, C-terminal domain CLA_RS00490 PF00815 Histidinol dehydrogenase CLA_RS00495 PF00475 Imidazoleglycerol-phosphate dehydratase CLA_RS00495 PF08645 Polynucleotide kinase 3 phosphatase CLA_RS00505 PF00117 Glutamine amidotransferase class-I CLA_RS00510 PF00977 Histidine biosynthesis protein CLA_RS00515 PF00977 Histidine biosynthesis protein CLA_RS00520 PF01502 Phosphoribosyl-AMP cyclohydrolase CLA_RS00520 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CLA_RS00525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS00530 PF01936 NYN domain CLA_RS00535 PF00460 Flagella basal body rod protein CLA_RS00535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLA_RS00535 PF07559 Flagellar basal body protein FlaE CLA_RS00540 PF06414 Zeta toxin CLA_RS00545 PF07690 Major Facilitator Superfamily CLA_RS00550 PF01106 NifU-like domain CLA_RS00560 PF02875 Mur ligase family, glutamate ligase domain CLA_RS00560 PF08245 Mur ligase middle domain CLA_RS00565 PF02575 YbaB/EbfC DNA-binding family CLA_RS00570 PF00595 PDZ domain (Also known as DHR or GLGF) CLA_RS00570 PF13180 PDZ domain CLA_RS00575 PF00348 Polyprenyl synthetase CLA_RS00580 PF00456 Transketolase, thiamine diphosphate binding domain CLA_RS00580 PF02779 Transketolase, pyrimidine binding domain CLA_RS00580 PF02780 Transketolase, C-terminal domain CLA_RS00585 PF01740 STAS domain CLA_RS00585 PF02405 CLA_RS00585 CLA_RS00590 PF00005 ABC transporter CLA_RS00595 PF02470 CLA_RS00595 CLA_RS00605 PF16522 CLA_RS00605 CLA_RS00610 PF00080 Copper/zinc superoxide dismutase (SODC) CLA_RS00615 PF12833 Helix-turn-helix domain CLA_RS00625 PF13453 CLA_RS00625 CLA_RS00630 PF03167 Uracil DNA glycosylase superfamily CLA_RS00640 PF00072 Response regulator receiver domain CLA_RS00640 PF00486 Transcriptional regulatory protein, C terminal CLA_RS00645 PF06518 Protein of unknown function (DUF1104) CLA_RS00650 PF04402 Protein of unknown function (DUF541) CLA_RS00655 PF00633 Helix-hairpin-helix motif CLA_RS00655 PF00730 HhH-GPD superfamily base excision DNA repair protein CLA_RS00660 PF04055 Radical SAM superfamily CLA_RS00660 PF13186 Iron-sulfur cluster-binding domain CLA_RS00675 PF12118 CLA_RS00675 CLA_RS00685 PF02254 TrkA-N domain CLA_RS00690 PF02386 Cation transport protein CLA_RS00695 PF03605 CLA_RS00695 CLA_RS00700 PF00206 Lyase CLA_RS00700 PF10415 Fumarase C C-terminus CLA_RS00705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS00705 PF02743 Cache domain CLA_RS00720 PF04359 Protein of unknown function (DUF493) CLA_RS00725 PF01967 MoaC family CLA_RS00735 PF07690 Major Facilitator Superfamily CLA_RS00745 PF01152 Bacterial-like globin CLA_RS00750 PF11741 AMIN domain CLA_RS00760 PF00113 Enolase, C-terminal TIM barrel domain CLA_RS00760 PF03952 Enolase, N-terminal domain CLA_RS00765 PF00154 recA bacterial DNA recombination protein CLA_RS00770 PF02621 Menaquinone biosynthesis CLA_RS00775 PF01313 CLA_RS00775 CLA_RS00780 PF01565 FAD binding domain CLA_RS00780 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CLA_RS00790 PF00459 Inositol monophosphatase family CLA_RS00795 PF00999 Sodium/hydrogen exchanger family CLA_RS00800 PF04055 Radical SAM superfamily CLA_RS00800 PF06968 Biotin and Thiamin Synthesis associated domain CLA_RS00805 PF01131 DNA topoisomerase CLA_RS00805 PF01396 CLA_RS00805 CLA_RS00805 PF01751 Toprim domain CLA_RS00810 PF01973 CLA_RS00810 CLA_RS00815 PF00669 Bacterial flagellin N-terminal helical region CLA_RS00815 PF00700 Bacterial flagellin C-terminal helical region CLA_RS00815 PF07196 Flagellin hook IN motif CLA_RS00820 PF00669 Bacterial flagellin N-terminal helical region CLA_RS00820 PF00700 Bacterial flagellin C-terminal helical region CLA_RS00820 PF07196 Flagellin hook IN motif CLA_RS00825 PF01973 CLA_RS00825 CLA_RS00830 PF01973 CLA_RS00830 CLA_RS00835 PF01973 CLA_RS00835 CLA_RS00840 PF01973 CLA_RS00840 CLA_RS00845 PF03102 NeuB family CLA_RS00845 PF08666 SAF domain CLA_RS00855 PF01052 Surface presentation of antigens (SPOA) CLA_RS00865 PF02541 Ppx/GppA phosphatase family CLA_RS00870 PF00037 4Fe-4S binding domain CLA_RS00875 PF00072 Response regulator receiver domain CLA_RS00875 PF00486 Transcriptional regulatory protein, C terminal CLA_RS00880 PF02152 Dihydroneopterin aldolase CLA_RS00885 PF02660 CLA_RS00885 CLA_RS00890 PF00034 Cytochrome c CLA_RS00890 PF03150 Di-haem cytochrome c peroxidase CLA_RS00900 PF13036 Protein of unknown function (DUF3897) CLA_RS00915 PF00829 Ribosomal prokaryotic L21 protein CLA_RS00920 PF01016 Ribosomal L27 protein CLA_RS00925 PF01018 GTP1/OBG CLA_RS00925 PF01926 50S ribosome-binding GTPase CLA_RS00930 PF00551 Formyl transferase CLA_RS00930 PF02911 Formyl transferase, C-terminal domain CLA_RS00935 PF03099 Biotin/lipoate A/B protein ligase family CLA_RS00940 PF13614 AAA domain CLA_RS00945 PF02195 ParB-like nuclease domain CLA_RS00950 PF00430 ATP synthase B/B' CF(0) CLA_RS00955 PF00430 ATP synthase B/B' CF(0) CLA_RS00960 PF00213 ATP synthase delta (OSCP) subunit CLA_RS00965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLA_RS00965 PF00306 ATP synthase alpha/beta chain, C terminal domain CLA_RS00965 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLA_RS00970 PF00231 ATP synthase CLA_RS00975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLA_RS00975 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLA_RS00980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CLA_RS00985 PF01618 CLA_RS00985 CLA_RS00990 PF02472 Biopolymer transport protein ExbD/TolR CLA_RS00995 PF13103 TonB C terminal CLA_RS01000 PF07676 WD40-like Beta Propeller Repeat CLA_RS01005 PF00691 OmpA family CLA_RS01015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLA_RS01020 PF00698 Acyl transferase domain CLA_RS01025 PF01048 Phosphorylase superfamily CLA_RS01030 PF01171 PP-loop family CLA_RS01035 PF00857 Isochorismatase family CLA_RS01040 PF13114 CLA_RS01040 CLA_RS01050 PF01207 Dihydrouridine synthase (Dus) CLA_RS01060 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLA_RS01065 PF02590 Predicted SPOUT methyltransferase CLA_RS01070 PF01039 Carboxyl transferase domain CLA_RS01075 PF01103 Surface antigen CLA_RS01075 PF07244 Surface antigen variable number repeat CLA_RS01080 PF02153 Prephenate dehydrogenase CLA_RS01085 PF01551 Peptidase family M23 CLA_RS01090 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CLA_RS01100 PF00288 GHMP kinases N terminal domain CLA_RS01100 PF08544 GHMP kinases C terminal CLA_RS01105 PF04296 Protein of unknown function (DUF448) CLA_RS01110 PF00009 Elongation factor Tu GTP binding domain CLA_RS01110 PF03144 Elongation factor Tu domain 2 CLA_RS01110 PF04760 Translation initiation factor IF-2, N-terminal region CLA_RS01110 PF11987 Translation-initiation factor 2 CLA_RS01115 PF02033 Ribosome-binding factor A CLA_RS01120 PF02576 Uncharacterised BCR, YhbC family COG0779 CLA_RS01125 PF10117 CLA_RS01125 CLA_RS01135 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLA_RS01140 PF01343 Peptidase family S49 CLA_RS01145 PF01979 Amidohydrolase family CLA_RS01150 PF01220 Dehydroquinase class II CLA_RS01155 PF00557 Metallopeptidase family M24 CLA_RS01155 PF01321 Creatinase/Prolidase N-terminal domain CLA_RS01160 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CLA_RS01165 PF00448 SRP54-type protein, GTPase domain CLA_RS01170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLA_RS01180 PF04542 Sigma-70 region 2 CLA_RS01180 PF04545 Sigma-70, region 4 CLA_RS01185 PF01052 Surface presentation of antigens (SPOA) CLA_RS01185 PF02154 Flagellar motor switch protein FliM CLA_RS01190 PF01052 Surface presentation of antigens (SPOA) CLA_RS01195 PF03641 Possible lysine decarboxylase CLA_RS01200 PF03054 tRNA methyl transferase CLA_RS01210 PF04608 Phosphatidylglycerophosphatase A CLA_RS01215 PF01747 ATP-sulfurylase CLA_RS01220 PF00072 Response regulator receiver domain CLA_RS01225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLA_RS01225 PF02542 YgbB family CLA_RS01230 PF01883 Domain of unknown function DUF59 CLA_RS01230 PF10609 ParA/MinD ATPase like CLA_RS01235 PF14602 Hexapeptide repeat of succinyl-transferase CLA_RS01235 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CLA_RS01235 PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal CLA_RS01240 PF00210 Ferritin-like domain CLA_RS01245 PF00342 Phosphoglucose isomerase CLA_RS01250 PF00483 Nucleotidyl transferase CLA_RS01255 PF01205 Uncharacterized protein family UPF0029 CLA_RS01255 PF09186 Domain of unknown function (DUF1949) CLA_RS01270 PF00005 ABC transporter CLA_RS01270 PF12848 ABC transporter CLA_RS01275 PF00990 GGDEF domain CLA_RS01280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLA_RS01280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLA_RS01280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLA_RS01280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLA_RS01285 PF01171 PP-loop family CLA_RS01290 PF00919 Uncharacterized protein family UPF0004 CLA_RS01290 PF04055 Radical SAM superfamily CLA_RS01295 PF00472 RF-1 domain CLA_RS01295 PF03462 PCRF domain CLA_RS01300 PF00582 Universal stress protein family CLA_RS01305 PF07885 Ion channel CLA_RS01310 PF03382 CLA_RS01310 CLA_RS01320 PF03601 CLA_RS01320 CLA_RS01325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLA_RS01325 PF03466 LysR substrate binding domain CLA_RS01330 PF08245 Mur ligase middle domain CLA_RS01335 PF00953 Glycosyl transferase family 4 CLA_RS01335 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CLA_RS01340 PF01676 Metalloenzyme superfamily CLA_RS01340 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLA_RS01345 PF13561 Enoyl-(Acyl carrier protein) reductase CLA_RS01350 PF01648 4'-phosphopantetheinyl transferase superfamily CLA_RS01355 PF03748 CLA_RS01355 CLA_RS01360 PF08348 CLA_RS01360 CLA_RS01360 PF13309 CLA_RS01360 CLA_RS01365 PF00199 Catalase CLA_RS01365 PF06628 Catalase-related immune-responsive CLA_RS01370 PF13637 Ankyrin repeats (many copies) CLA_RS01375 PF00206 Lyase CLA_RS01375 PF14698 Argininosuccinate lyase C-terminal CLA_RS01380 PF08348 CLA_RS01380 CLA_RS01380 PF13309 CLA_RS01380 CLA_RS01385 PF01042 Endoribonuclease L-PSP CLA_RS01390 PF03606 CLA_RS01390 CLA_RS01395 PF01053 Cys/Met metabolism PLP-dependent enzyme CLA_RS01400 PF00206 Lyase CLA_RS01400 PF10397 Adenylosuccinate lyase C-terminus CLA_RS01405 PF03972 MmgE/PrpD family CLA_RS01410 PF04023 FeoA domain CLA_RS01415 PF02421 Ferrous iron transport protein B CLA_RS01415 PF07664 CLA_RS01415 CLA_RS01415 PF07670 Nucleoside recognition CLA_RS01420 PF03070 TENA/THI-4/PQQC family CLA_RS01425 PF00550 Phosphopantetheine attachment site CLA_RS01430 PF00109 Beta-ketoacyl synthase, N-terminal domain CLA_RS01430 PF02801 Beta-ketoacyl synthase, C-terminal domain CLA_RS01435 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CLA_RS01445 PF01061 CLA_RS01445 CLA_RS01450 PF00005 ABC transporter CLA_RS01460 PF02563 Polysaccharide biosynthesis/export protein CLA_RS01460 PF10531 SLBB domain CLA_RS01465 PF00571 CBS domain CLA_RS01465 PF01380 SIS domain CLA_RS01470 PF01467 Cytidylyltransferase CLA_RS01475 PF04991 CLA_RS01475 CLA_RS01480 PF00515 Tetratricopeptide repeat CLA_RS01480 PF00534 Glycosyl transferases group 1 CLA_RS01480 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CLA_RS01480 PF13181 Tetratricopeptide repeat CLA_RS01480 PF13432 Tetratricopeptide repeat CLA_RS01490 PF11186 CLA_RS01490 CLA_RS01495 PF08282 haloacid dehalogenase-like hydrolase CLA_RS01515 PF13419 Haloacid dehalogenase-like hydrolase CLA_RS01520 PF12804 MobA-like NTP transferase domain CLA_RS01525 PF12680 SnoaL-like domain CLA_RS01535 PF00483 Nucleotidyl transferase CLA_RS01560 PF08241 Methyltransferase domain CLA_RS01565 PF00391 PEP-utilising enzyme, mobile domain CLA_RS01565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLA_RS01570 PF00117 Glutamine amidotransferase class-I CLA_RS01575 PF00483 Nucleotidyl transferase CLA_RS01580 PF01583 Adenylylsulphate kinase CLA_RS01585 PF05159 CLA_RS01585 CLA_RS01590 PF05159 CLA_RS01590 CLA_RS01605 PF00067 Cytochrome P450 CLA_RS01615 PF08529 NusA N-terminal domain CLA_RS01615 PF13184 NusA-like KH domain CLA_RS01625 PF00919 Uncharacterized protein family UPF0004 CLA_RS01625 PF01938 TRAM domain CLA_RS01625 PF04055 Radical SAM superfamily CLA_RS01630 PF04028 CLA_RS01630 CLA_RS01655 PF01790 CLA_RS01655 CLA_RS01660 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CLA_RS01665 PF00890 FAD binding domain CLA_RS01665 PF02910 Fumarate reductase flavoprotein C-term CLA_RS01670 PF13085 2Fe-2S iron-sulfur cluster binding domain CLA_RS01670 PF13183 4Fe-4S dicluster domain CLA_RS01675 PF00350 Dynamin family CLA_RS01680 PF00350 Dynamin family CLA_RS01685 PF04973 CLA_RS01685 CLA_RS01690 PF01243 Pyridoxamine 5'-phosphate oxidase CLA_RS01695 PF02525 Flavodoxin-like fold CLA_RS01700 PF01638 HxlR-like helix-turn-helix CLA_RS01705 PF08212 Lipocalin-like domain CLA_RS01710 PF00107 Zinc-binding dehydrogenase CLA_RS01710 PF08240 Alcohol dehydrogenase GroES-like domain CLA_RS01715 PF00271 Helicase conserved C-terminal domain CLA_RS01715 PF04851 Type III restriction enzyme, res subunit CLA_RS01715 PF08463 CLA_RS01715 CLA_RS01715 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CLA_RS01730 PF01420 Type I restriction modification DNA specificity domain CLA_RS01735 PF13310 CLA_RS01735 CLA_RS01745 PF00994 Probable molybdopterin binding domain CLA_RS01745 PF03453 MoeA N-terminal region (domain I and II) CLA_RS01750 PF02391 MoaE protein CLA_RS01755 PF02597 ThiS family CLA_RS01760 PF00394 Multicopper oxidase CLA_RS01760 PF07731 Multicopper oxidase CLA_RS01760 PF07732 Multicopper oxidase CLA_RS01765 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLA_RS01770 PF01292 Prokaryotic cytochrome b561 CLA_RS01785 PF00384 Molybdopterin oxidoreductase CLA_RS01785 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLA_RS01790 PF00384 Molybdopterin oxidoreductase CLA_RS01790 PF01568 Molydopterin dinucleotide binding domain CLA_RS01795 PF13247 4Fe-4S dicluster domain CLA_RS01800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLA_RS01805 PF01206 Sulfurtransferase TusA CLA_RS01810 PF00586 AIR synthase related protein, N-terminal domain CLA_RS01810 PF02769 AIR synthase related protein, C-terminal domain CLA_RS01815 PF00171 Aldehyde dehydrogenase family CLA_RS01815 PF01619 Proline dehydrogenase CLA_RS01820 PF00474 Sodium:solute symporter family CLA_RS01825 PF01206 Sulfurtransferase TusA CLA_RS01830 PF04143 CLA_RS01830 CLA_RS01840 PF00709 Adenylosuccinate synthetase CLA_RS01845 PF02050 Flagellar FliJ protein CLA_RS01850 PF03448 MgtE intracellular N domain CLA_RS01855 PF04368 CLA_RS01855 CLA_RS01860 PF00117 Glutamine amidotransferase class-I CLA_RS01860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLA_RS01865 PF13386 CLA_RS01865 CLA_RS01870 PF00115 Cytochrome C and Quinol oxidase polypeptide I CLA_RS01875 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO CLA_RS01880 PF05545 CLA_RS01880 CLA_RS01885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CLA_RS01885 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CLA_RS01890 PF13179 CLA_RS01890 CLA_RS01900 PF05751 CLA_RS01900 CLA_RS01905 PF12705 PD-(D/E)XK nuclease superfamily CLA_RS01910 PF00580 UvrD/REP helicase N-terminal domain CLA_RS01910 PF13361 UvrD-like helicase C-terminal domain CLA_RS01915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS01915 PF02743 Cache domain CLA_RS01920 PF00572 Ribosomal protein L13 CLA_RS01925 PF00380 Ribosomal protein S9/S16 CLA_RS01930 PF00691 OmpA family CLA_RS01930 PF13505 Outer membrane protein beta-barrel domain CLA_RS01935 PF13419 Haloacid dehalogenase-like hydrolase CLA_RS01940 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLA_RS01940 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLA_RS01940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLA_RS01940 PF10371 Domain of unknown function CLA_RS01940 PF12838 4Fe-4S dicluster domain CLA_RS01940 PF17147 CLA_RS01940 CLA_RS01950 PF00263 CLA_RS01950 CLA_RS01960 PF00437 Type II/IV secretion system protein CLA_RS01960 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLA_RS01965 PF00482 Type II secretion system (T2SS), protein F CLA_RS01970 PF01925 CLA_RS01970 CLA_RS01975 PF09674 CLA_RS01975 CLA_RS01980 PF00460 Flagella basal body rod protein CLA_RS01980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLA_RS01985 PF05130 FlgN protein CLA_RS01995 PF10135 CLA_RS01995 CLA_RS02000 PF02119 CLA_RS02000 CLA_RS02005 PF03602 Conserved hypothetical protein 95 CLA_RS02025 PF00586 AIR synthase related protein, N-terminal domain CLA_RS02030 PF01142 tRNA pseudouridine synthase D (TruD) CLA_RS02035 PF10087 CLA_RS02035 CLA_RS02045 PF00258 Flavodoxin CLA_RS02055 PF07264 Etoposide-induced protein 2 CLA_RS02060 PF08761 dUTPase CLA_RS02070 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLA_RS02070 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CLA_RS02075 PF00121 Triosephosphate isomerase CLA_RS02080 PF00162 Phosphoglycerate kinase CLA_RS02085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLA_RS02085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLA_RS02090 PF01467 Cytidylyltransferase CLA_RS02095 PF02410 Oligomerisation domain CLA_RS02100 PF07719 Tetratricopeptide repeat CLA_RS02100 PF13176 Tetratricopeptide repeat CLA_RS02100 PF13181 Tetratricopeptide repeat CLA_RS02100 PF13414 TPR repeat CLA_RS02105 PF06476 CLA_RS02105 CLA_RS02110 PF13687 CLA_RS02110 CLA_RS02115 PF01230 HIT domain CLA_RS02120 PF00206 Lyase CLA_RS02120 PF10415 Fumarase C C-terminus CLA_RS02125 PF01380 SIS domain CLA_RS02125 PF13522 Glutamine amidotransferase domain CLA_RS02135 PF04055 Radical SAM superfamily CLA_RS02140 PF00860 Permease family CLA_RS02145 PF00156 Phosphoribosyl transferase domain CLA_RS02150 PF00384 Molybdopterin oxidoreductase CLA_RS02150 PF01568 Molydopterin dinucleotide binding domain CLA_RS02160 PF13231 CLA_RS02160 CLA_RS02170 PF05538 CLA_RS02170 CLA_RS02175 PF03883 CLA_RS02175 CLA_RS02200 PF00009 Elongation factor Tu GTP binding domain CLA_RS02200 PF03143 Elongation factor Tu C-terminal domain CLA_RS02200 PF03144 Elongation factor Tu domain 2 CLA_RS02205 PF00471 Ribosomal protein L33 CLA_RS02215 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CLA_RS02220 PF02357 Transcription termination factor nusG CLA_RS02225 PF00298 Ribosomal protein L11, RNA binding domain CLA_RS02225 PF03946 Ribosomal protein L11, N-terminal domain CLA_RS02230 PF00687 Ribosomal protein L1p/L10e family CLA_RS02235 PF00466 Ribosomal protein L10 CLA_RS02240 PF00542 Ribosomal protein L7/L12 C-terminal domain CLA_RS02240 PF16320 CLA_RS02240 CLA_RS02245 PF00562 RNA polymerase Rpb2, domain 6 CLA_RS02245 PF04560 RNA polymerase Rpb2, domain 7 CLA_RS02245 PF04561 RNA polymerase Rpb2, domain 2 CLA_RS02245 PF04563 RNA polymerase beta subunit CLA_RS02245 PF04565 RNA polymerase Rpb2, domain 3 CLA_RS02245 PF10385 RNA polymerase beta subunit external 1 domain CLA_RS02250 PF00623 RNA polymerase Rpb1, domain 2 CLA_RS02250 PF04983 RNA polymerase Rpb1, domain 3 CLA_RS02250 PF04997 RNA polymerase Rpb1, domain 1 CLA_RS02250 PF04998 RNA polymerase Rpb1, domain 5 CLA_RS02250 PF05000 RNA polymerase Rpb1, domain 4 CLA_RS02255 PF00164 Ribosomal protein S12/S23 CLA_RS02260 PF00177 Ribosomal protein S7p/S5e CLA_RS02265 PF00009 Elongation factor Tu GTP binding domain CLA_RS02265 PF00679 Elongation factor G C-terminus CLA_RS02265 PF03144 Elongation factor Tu domain 2 CLA_RS02265 PF03764 Elongation factor G, domain IV CLA_RS02265 PF14492 Elongation Factor G, domain II CLA_RS02270 PF00571 CBS domain CLA_RS02270 PF01595 CLA_RS02270 CLA_RS02270 PF03471 Transporter associated domain CLA_RS02275 PF05992 CLA_RS02275 CLA_RS02280 PF00474 Sodium:solute symporter family CLA_RS02285 PF03435 Saccharopine dehydrogenase CLA_RS02285 PF16653 CLA_RS02285 CLA_RS02290 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS02320 PF04214 CLA_RS02320 CLA_RS02325 PF03544 Gram-negative bacterial TonB protein C-terminal CLA_RS02330 PF02472 Biopolymer transport protein ExbD/TolR CLA_RS02335 PF01618 CLA_RS02335 CLA_RS02340 PF00593 TonB dependent receptor CLA_RS02340 PF07715 TonB-dependent Receptor Plug Domain CLA_RS02345 PF13177 DNA polymerase III, delta subunit CLA_RS02350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLA_RS02350 PF07497 Rho termination factor, RNA-binding domain CLA_RS02350 PF07498 Rho termination factor, N-terminal domain CLA_RS02355 PF00122 E1-E2 ATPase CLA_RS02355 PF00403 Heavy-metal-associated domain CLA_RS02355 PF00702 haloacid dehalogenase-like hydrolase CLA_RS02355 PF12156 CLA_RS02355 CLA_RS02360 PF03597 CLA_RS02360 CLA_RS02365 PF00034 Cytochrome c CLA_RS02370 PF13242 HAD-hyrolase-like CLA_RS02375 PF01370 NAD dependent epimerase/dehydratase family CLA_RS02380 PF00294 pfkB family carbohydrate kinase CLA_RS02380 PF01467 Cytidylyltransferase CLA_RS02385 PF13580 SIS domain CLA_RS02390 PF00224 Pyruvate kinase, barrel domain CLA_RS02390 PF02887 Pyruvate kinase, alpha/beta domain CLA_RS02395 PF06039 CLA_RS02395 CLA_RS02400 PF03309 Type III pantothenate kinase CLA_RS02420 PF02686 Glu-tRNAGln amidotransferase C subunit CLA_RS02425 PF02674 CLA_RS02425 CLA_RS02430 PF01475 Ferric uptake regulator family CLA_RS02435 PF00152 tRNA synthetases class II (D, K and N) CLA_RS02435 PF01336 OB-fold nucleic acid binding domain CLA_RS02440 PF00464 Serine hydroxymethyltransferase CLA_RS02445 PF08966 Domain of unknown function (DUF1882) CLA_RS02450 PF05036 Sporulation related domain CLA_RS02455 PF08501 Shikimate dehydrogenase substrate binding domain CLA_RS02460 PF00226 DnaJ domain CLA_RS02460 PF00684 DnaJ central domain CLA_RS02460 PF01556 DnaJ C terminal domain CLA_RS02465 PF00072 Response regulator receiver domain CLA_RS02465 PF00486 Transcriptional regulatory protein, C terminal CLA_RS02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLA_RS02475 PF02132 RecR protein CLA_RS02485 PF01541 GIY-YIG catalytic domain CLA_RS02485 PF02151 UvrB/uvrC motif CLA_RS02485 PF08459 UvrC Helix-hairpin-helix N-terminal CLA_RS02495 PF03600 Citrate transporter CLA_RS02500 PF00117 Glutamine amidotransferase class-I CLA_RS02500 PF00958 GMP synthase C terminal domain CLA_RS02500 PF02540 NAD synthase CLA_RS02505 PF13649 Methyltransferase domain CLA_RS02515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLA_RS02515 PF02843 Phosphoribosylglycinamide synthetase, C domain CLA_RS02515 PF02844 Phosphoribosylglycinamide synthetase, N domain CLA_RS02520 PF06271 CLA_RS02520 CLA_RS02530 PF00156 Phosphoribosyl transferase domain CLA_RS02535 PF00013 KH domain CLA_RS02535 PF00575 S1 RNA binding domain CLA_RS02535 PF01138 3' exoribonuclease family, domain 1 CLA_RS02535 PF03725 3' exoribonuclease family, domain 2 CLA_RS02535 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CLA_RS02605 PF02689 CLA_RS02605 CLA_RS02605 PF05970 CLA_RS02605 CLA_RS02615 PF03548 Outer membrane lipoprotein carrier protein LolA CLA_RS02620 PF00271 Helicase conserved C-terminal domain CLA_RS02620 PF01043 SecA preprotein cross-linking domain CLA_RS02620 PF02810 SEC-C motif CLA_RS02620 PF07516 SecA Wing and Scaffold domain CLA_RS02620 PF07517 SecA DEAD-like domain CLA_RS02625 PF00072 Response regulator receiver domain CLA_RS02625 PF00158 Sigma-54 interaction domain CLA_RS02625 PF02954 Bacterial regulatory protein, Fis family CLA_RS02630 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLA_RS02630 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLA_RS02635 PF03350 CLA_RS02635 CLA_RS02640 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLA_RS02645 PF04055 Radical SAM superfamily CLA_RS02645 PF13394 4Fe-4S single cluster domain CLA_RS02655 PF07719 Tetratricopeptide repeat CLA_RS02655 PF13181 Tetratricopeptide repeat CLA_RS02660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLA_RS02660 PF02403 Seryl-tRNA synthetase N-terminal domain CLA_RS02665 PF00579 tRNA synthetases class I (W and Y) CLA_RS02670 PF01202 Shikimate kinase CLA_RS02675 PF01926 50S ribosome-binding GTPase CLA_RS02675 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLA_RS02680 PF00892 EamA-like transporter family CLA_RS02685 PF00860 Permease family CLA_RS02690 PF00793 DAHP synthetase I family CLA_RS02695 PF00885 6,7-dimethyl-8-ribityllumazine synthase CLA_RS02700 PF01029 NusB family CLA_RS02705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLA_RS02710 PF03724 META domain CLA_RS02715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS02715 PF00672 HAMP domain CLA_RS02720 PF01808 AICARFT/IMPCHase bienzyme CLA_RS02720 PF02142 MGS-like domain CLA_RS02725 PF00226 DnaJ domain CLA_RS02725 PF05099 Tellurite resistance protein TerB CLA_RS02730 PF00586 AIR synthase related protein, N-terminal domain CLA_RS02730 PF02769 AIR synthase related protein, C-terminal domain CLA_RS02735 PF01926 50S ribosome-binding GTPase CLA_RS02735 PF10396 GTP-binding protein TrmE N-terminus CLA_RS02735 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CLA_RS02740 PF14804 Jag N-terminus CLA_RS02745 PF02096 60Kd inner membrane protein CLA_RS02745 PF14849 YidC periplasmic domain CLA_RS02750 PF01809 CLA_RS02750 CLA_RS02755 PF00825 Ribonuclease P CLA_RS02760 PF00468 Ribosomal protein L34 CLA_RS02765 PF00583 Acetyltransferase (GNAT) family CLA_RS02770 PF03167 Uracil DNA glycosylase superfamily CLA_RS02780 PF03061 Thioesterase superfamily CLA_RS02785 PF07669 Eco57I restriction-modification methylase CLA_RS02795 PF05935 Arylsulfotransferase (ASST) CLA_RS02805 PF01546 Peptidase family M20/M25/M40 CLA_RS02810 PF00565 Staphylococcal nuclease homologue CLA_RS02825 PF08003 Protein of unknown function (DUF1698) CLA_RS02830 PF00669 Bacterial flagellin N-terminal helical region CLA_RS02835 PF13664 CLA_RS02835 CLA_RS02840 PF05175 Methyltransferase small domain CLA_RS02845 PF01435 Peptidase family M48 CLA_RS02845 PF16491 CLA_RS02845 CLA_RS02850 PF00005 ABC transporter CLA_RS02850 PF12848 ABC transporter CLA_RS02850 PF16326 CLA_RS02850 CLA_RS02855 PF00149 Calcineurin-like phosphoesterase CLA_RS02860 PF02666 CLA_RS02860 CLA_RS02865 PF01312 FlhB HrpN YscU SpaS Family CLA_RS02875 PF07690 Major Facilitator Superfamily CLA_RS02885 PF09527 CLA_RS02885 CLA_RS02890 PF00202 Aminotransferase class-III CLA_RS02900 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLA_RS02900 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLA_RS02905 PF00717 Peptidase S24-like CLA_RS02910 PF00155 Aminotransferase class I and II CLA_RS02915 PF01702 Queuine tRNA-ribosyltransferase CLA_RS02920 PF01544 CorA-like Mg2+ transporter protein CLA_RS02930 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CLA_RS02930 PF02785 Biotin carboxylase C-terminal domain CLA_RS02930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLA_RS02940 PF04376 CLA_RS02940 CLA_RS02940 PF04377 CLA_RS02940 CLA_RS02945 PF00226 DnaJ domain CLA_RS02950 PF01098 CLA_RS02950 CLA_RS02955 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLA_RS02960 PF00266 Aminotransferase class-V CLA_RS02965 PF03008 CLA_RS02965 CLA_RS02970 PF00512 His Kinase A (phospho-acceptor) domain CLA_RS02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLA_RS02980 PF00588 SpoU rRNA Methylase family CLA_RS02985 PF00005 ABC transporter CLA_RS02990 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS02995 PF01235 CLA_RS02995 CLA_RS03000 PF02092 CLA_RS03000 CLA_RS03005 PF01551 Peptidase family M23 CLA_RS03010 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase CLA_RS03015 PF00925 GTP cyclohydrolase II CLA_RS03015 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CLA_RS03035 PF01098 CLA_RS03035 CLA_RS03040 PF00849 RNA pseudouridylate synthase CLA_RS03040 PF01479 S4 domain CLA_RS03050 PF02390 Putative methyltransferase CLA_RS03055 PF00005 ABC transporter CLA_RS03065 PF01551 Peptidase family M23 CLA_RS03070 PF00696 Amino acid kinase family CLA_RS03075 PF01192 RNA polymerase Rpb6 CLA_RS03080 PF01842 ACT domain CLA_RS03080 PF02824 TGS domain CLA_RS03080 PF04607 Region found in RelA / SpoT proteins CLA_RS03080 PF13328 HD domain CLA_RS03085 PF00579 tRNA synthetases class I (W and Y) CLA_RS03085 PF01479 S4 domain CLA_RS03090 PF03060 Nitronate monooxygenase CLA_RS03095 PF01520 N-acetylmuramoyl-L-alanine amidase CLA_RS03100 PF01266 FAD dependent oxidoreductase CLA_RS03100 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CLA_RS03110 PF00595 PDZ domain (Also known as DHR or GLGF) CLA_RS03110 PF02163 Peptidase family M50 CLA_RS03115 PF01066 CDP-alcohol phosphatidyltransferase CLA_RS03120 PF13561 Enoyl-(Acyl carrier protein) reductase CLA_RS03125 PF00701 Dihydrodipicolinate synthetase family CLA_RS03130 PF00675 Insulinase (Peptidase family M16) CLA_RS03130 PF05193 Peptidase M16 inactive domain CLA_RS03135 PF01180 Dihydroorotate dehydrogenase CLA_RS03140 PF00005 ABC transporter CLA_RS03140 PF00664 ABC transporter transmembrane region CLA_RS03145 PF01406 tRNA synthetases class I (C) catalytic domain CLA_RS03145 PF09190 DALR domain CLA_RS03150 PF03023 CLA_RS03150 CLA_RS03155 PF03961 CLA_RS03155 CLA_RS03160 PF01330 RuvA N terminal domain CLA_RS03160 PF07499 RuvA, C-terminal domain CLA_RS03160 PF14520 Helix-hairpin-helix domain CLA_RS03165 PF01820 D-ala D-ala ligase N-terminus CLA_RS03165 PF07478 D-ala D-ala ligase C-terminus CLA_RS03170 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CLA_RS03175 PF12697 Alpha/beta hydrolase family CLA_RS03180 PF08245 Mur ligase middle domain CLA_RS03185 PF02107 CLA_RS03185 CLA_RS03190 PF01515 Phosphate acetyl/butaryl transferase CLA_RS03195 PF00871 Acetokinase family CLA_RS03200 PF03180 NLPA lipoprotein CLA_RS03205 PF01501 Glycosyl transferase family 8 CLA_RS03210 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS03215 PF00005 ABC transporter CLA_RS03215 PF09383 NIL domain CLA_RS03220 PF00133 tRNA synthetases class I (I, L, M and V) CLA_RS03220 PF08264 Anticodon-binding domain of tRNA CLA_RS03220 PF10458 Valyl tRNA synthetase tRNA binding arm CLA_RS03230 PF00719 Inorganic pyrophosphatase CLA_RS03235 PF00406 Adenylate kinase CLA_RS03240 PF00152 tRNA synthetases class II (D, K and N) CLA_RS03240 PF01336 OB-fold nucleic acid binding domain CLA_RS03240 PF02938 GAD domain CLA_RS03245 PF01513 ATP-NAD kinase CLA_RS03250 PF13476 AAA domain CLA_RS03255 PF00072 Response regulator receiver domain CLA_RS03255 PF00990 GGDEF domain CLA_RS03260 PF01026 TatD related DNase CLA_RS03265 PF01464 Transglycosylase SLT domain CLA_RS03265 PF01476 LysM domain CLA_RS03270 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CLA_RS03270 PF05036 Sporulation related domain CLA_RS03275 PF08282 haloacid dehalogenase-like hydrolase CLA_RS03285 PF03968 OstA-like protein CLA_RS03290 PF01926 50S ribosome-binding GTPase CLA_RS03300 PF00905 Penicillin binding protein transpeptidase domain CLA_RS03300 PF03717 Penicillin-binding Protein dimerisation domain CLA_RS03305 PF02547 Queuosine biosynthesis protein CLA_RS03310 PF00902 Sec-independent protein translocase protein (TatC) CLA_RS03315 PF02416 mttA/Hcf106 family CLA_RS03320 PF03773 CLA_RS03320 CLA_RS03325 PF01022 Bacterial regulatory protein, arsR family CLA_RS03330 PF04055 Radical SAM superfamily CLA_RS03335 PF00293 NUDIX domain CLA_RS03340 PF00696 Amino acid kinase family CLA_RS03340 PF01842 ACT domain CLA_RS03340 PF13840 ACT domain CLA_RS03345 PF12163 DNA replication regulator CLA_RS03350 PF13177 DNA polymerase III, delta subunit CLA_RS03355 PF00809 Pterin binding enzyme CLA_RS03360 PF00533 BRCA1 C Terminus (BRCT) domain CLA_RS03360 PF01653 NAD-dependent DNA ligase adenylation domain CLA_RS03360 PF03120 NAD-dependent DNA ligase OB-fold domain CLA_RS03360 PF12826 Helix-hairpin-helix motif CLA_RS03365 PF01728 FtsJ-like methyltransferase CLA_RS03370 PF01687 Riboflavin kinase CLA_RS03370 PF06574 FAD synthetase CLA_RS03375 PF13649 Methyltransferase domain CLA_RS03380 PF01926 50S ribosome-binding GTPase CLA_RS03380 PF06071 Protein of unknown function (DUF933) CLA_RS03385 PF00883 Cytosol aminopeptidase family, catalytic domain CLA_RS03390 PF09335 CLA_RS03390 CLA_RS03395 PF00156 Phosphoribosyl transferase domain CLA_RS03405 PF02502 Ribose/Galactose Isomerase CLA_RS03410 PF01339 CheB methylesterase CLA_RS03415 PF01739 CheR methyltransferase, SAM binding domain CLA_RS03420 PF07690 Major Facilitator Superfamily CLA_RS03425 PF04055 Radical SAM superfamily CLA_RS03430 PF00675 Insulinase (Peptidase family M16) CLA_RS03430 PF05193 Peptidase M16 inactive domain CLA_RS03435 PF00270 DEAD/DEAH box helicase CLA_RS03435 PF00271 Helicase conserved C-terminal domain CLA_RS03440 PF00027 Cyclic nucleotide-binding domain CLA_RS03440 PF13545 Crp-like helix-turn-helix domain CLA_RS03445 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS03450 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS03455 PF00005 ABC transporter CLA_RS03460 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLA_RS03465 PF07690 Major Facilitator Superfamily CLA_RS03470 PF02080 TrkA-C domain CLA_RS03475 PF01761 3-dehydroquinate synthase CLA_RS03480 PF00924 Mechanosensitive ion channel CLA_RS03485 PF00919 Uncharacterized protein family UPF0004 CLA_RS03485 PF04055 Radical SAM superfamily CLA_RS03490 PF00004 ATPase family associated with various cellular activities (AAA) CLA_RS03490 PF01434 Peptidase family M41 CLA_RS03495 PF00994 Probable molybdopterin binding domain CLA_RS03500 PF00581 Rhodanese-like domain CLA_RS03505 PF00581 Rhodanese-like domain CLA_RS03510 PF00183 Hsp90 protein CLA_RS03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLA_RS03515 PF02537 CLA_RS03515 CLA_RS03520 PF01553 Acyltransferase CLA_RS03530 PF13507 CobB/CobQ-like glutamine amidotransferase domain CLA_RS03535 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CLA_RS03540 PF01259 SAICAR synthetase CLA_RS03545 PF03572 Peptidase family S41 CLA_RS03545 PF13180 PDZ domain CLA_RS03550 PF00004 ATPase family associated with various cellular activities (AAA) CLA_RS03550 PF02861 Clp amino terminal domain CLA_RS03550 PF07724 AAA domain (Cdc48 subfamily) CLA_RS03550 PF10431 C-terminal, D2-small domain, of ClpB protein CLA_RS03555 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLA_RS03555 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CLA_RS03560 PF00374 Nickel-dependent hydrogenase CLA_RS03565 PF01292 Prokaryotic cytochrome b561 CLA_RS03570 PF01750 Hydrogenase maturation protease CLA_RS03575 PF11396 Protein of unknown function (DUF2874) CLA_RS03580 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLA_RS03585 PF02325 CLA_RS03585 CLA_RS03590 PF01464 Transglycosylase SLT domain CLA_RS03595 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CLA_RS03600 PF00316 Fructose-1-6-bisphosphatase CLA_RS03610 PF01588 Putative tRNA binding domain CLA_RS03610 PF09334 tRNA synthetases class I (M) CLA_RS03620 PF13531 Bacterial extracellular solute-binding protein CLA_RS03625 PF04264 YceI-like domain CLA_RS03630 PF06508 Queuosine biosynthesis protein QueC CLA_RS03635 PF02130 Uncharacterized protein family UPF0054 CLA_RS03640 PF11738 Protein of unknown function (DUF3298) CLA_RS03640 PF13739 Domain of unknown function (DUF4163) CLA_RS03645 PF11396 Protein of unknown function (DUF2874) CLA_RS03650 PF01694 Rhomboid family CLA_RS03655 PF00300 Histidine phosphatase superfamily (branch 1) CLA_RS03665 PF01177 Asp/Glu/Hydantoin racemase CLA_RS03670 PF00589 Phage integrase family CLA_RS03675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLA_RS03680 PF00994 Probable molybdopterin binding domain CLA_RS03680 PF03453 MoeA N-terminal region (domain I and II) CLA_RS03700 PF13144 SAF-like CLA_RS03705 PF02441 Flavoprotein CLA_RS03710 PF01467 Cytidylyltransferase CLA_RS03715 PF02223 Thymidylate kinase CLA_RS03720 PF03129 Anticodon binding domain CLA_RS03720 PF13393 Histidyl-tRNA synthetase CLA_RS03725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLA_RS03725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLA_RS03730 PF00132 Bacterial transferase hexapeptide (six repeats) CLA_RS03735 PF03033 Glycosyltransferase family 28 N-terminal domain CLA_RS03735 PF04101 Glycosyltransferase family 28 C-terminal domain CLA_RS03740 PF01168 Alanine racemase, N-terminal domain CLA_RS03745 PF00309 CLA_RS03745 CLA_RS03745 PF04552 Sigma-54, DNA binding domain CLA_RS03745 PF04963 Sigma-54 factor, core binding domain CLA_RS03750 PF00005 ABC transporter CLA_RS03755 PF02367 Uncharacterised P-loop hydrolase UPF0079 CLA_RS03760 PF01479 S4 domain CLA_RS03765 PF00764 Arginosuccinate synthase CLA_RS03770 PF01281 Ribosomal protein L9, N-terminal domain CLA_RS03770 PF03948 Ribosomal protein L9, C-terminal domain CLA_RS03775 PF00227 Proteasome subunit CLA_RS03780 PF07724 AAA domain (Cdc48 subfamily) CLA_RS03780 PF10431 C-terminal, D2-small domain, of ClpB protein CLA_RS03785 PF01926 50S ribosome-binding GTPase CLA_RS03785 PF07650 KH domain CLA_RS03805 PF02561 Flagellar protein FliS CLA_RS03820 PF03646 FlaG protein CLA_RS03825 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLA_RS03830 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CLA_RS03830 PF03900 Porphobilinogen deaminase, C-terminal domain CLA_RS03835 PF04186 CLA_RS03835 CLA_RS03840 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLA_RS03840 PF03129 Anticodon binding domain CLA_RS03840 PF04073 Aminoacyl-tRNA editing domain CLA_RS03845 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CLA_RS03845 PF01488 Shikimate / quinate 5-dehydrogenase CLA_RS03845 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLA_RS03850 PF00348 Polyprenyl synthetase CLA_RS03860 PF09442 Domain of unknown function (DUF2018) CLA_RS03865 PF13419 Haloacid dehalogenase-like hydrolase CLA_RS03875 PF00999 Sodium/hydrogen exchanger family CLA_RS03875 PF02254 TrkA-N domain CLA_RS03880 PF13411 MerR HTH family regulatory protein CLA_RS03885 PF00226 DnaJ domain CLA_RS03885 PF01556 DnaJ C terminal domain CLA_RS03890 PF00595 PDZ domain (Also known as DHR or GLGF) CLA_RS03890 PF13180 PDZ domain CLA_RS03890 PF13365 Trypsin-like peptidase domain CLA_RS03895 PF00072 Response regulator receiver domain CLA_RS03895 PF00486 Transcriptional regulatory protein, C terminal CLA_RS03900 PF00672 HAMP domain CLA_RS03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLA_RS03905 PF00580 UvrD/REP helicase N-terminal domain CLA_RS03905 PF13361 UvrD-like helicase C-terminal domain CLA_RS03910 PF08534 Redoxin CLA_RS03915 PF13545 Crp-like helix-turn-helix domain CLA_RS03920 PF11127 Protein of unknown function (DUF2892) CLA_RS03925 PF01625 Peptide methionine sulfoxide reductase CLA_RS03930 PF01155 Hydrogenase expression/synthesis hypA family CLA_RS03935 PF00586 AIR synthase related protein, N-terminal domain CLA_RS03935 PF02769 AIR synthase related protein, C-terminal domain CLA_RS03940 PF01924 Hydrogenase formation hypA family CLA_RS03945 PF01455 HupF/HypC family CLA_RS03950 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLA_RS03955 PF00708 Acylphosphatase CLA_RS03955 PF01300 Telomere recombination CLA_RS03955 PF07503 HypF finger CLA_RS03965 PF01863 Protein of unknown function DUF45 CLA_RS03970 PF01554 MatE CLA_RS03980 PF11144 CLA_RS03980 CLA_RS03985 PF00005 ABC transporter CLA_RS03990 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS03995 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS04000 PF12849 PBP superfamily domain CLA_RS04005 PF00072 Response regulator receiver domain CLA_RS04005 PF00486 Transcriptional regulatory protein, C terminal CLA_RS04010 PF00512 His Kinase A (phospho-acceptor) domain CLA_RS04010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLA_RS04015 PF00210 Ferritin-like domain CLA_RS04020 PF00717 Peptidase S24-like CLA_RS04025 PF13435 Cytochrome c554 and c-prime CLA_RS04030 PF00581 Rhodanese-like domain CLA_RS04035 PF13098 Thioredoxin-like domain CLA_RS04040 PF01578 CLA_RS04040 CLA_RS04040 PF05140 CLA_RS04040 CLA_RS04050 PF00132 Bacterial transferase hexapeptide (six repeats) CLA_RS04050 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CLA_RS04055 PF01842 ACT domain CLA_RS04055 PF10369 Small subunit of acetolactate synthase CLA_RS04060 PF00205 Thiamine pyrophosphate enzyme, central domain CLA_RS04060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLA_RS04060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLA_RS04065 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLA_RS04070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLA_RS04075 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLA_RS04075 PF17147 CLA_RS04075 CLA_RS04080 PF12838 4Fe-4S dicluster domain CLA_RS04085 PF00056 lactate/malate dehydrogenase, NAD binding domain CLA_RS04085 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLA_RS04090 PF13109 CLA_RS04090 CLA_RS04090 PF13116 CLA_RS04090 CLA_RS04095 PF02618 YceG-like family CLA_RS04100 PF01580 FtsK/SpoIIIE family CLA_RS04100 PF09397 Ftsk gamma domain CLA_RS04105 PF00669 Bacterial flagellin N-terminal helical region CLA_RS04105 PF00700 Bacterial flagellin C-terminal helical region CLA_RS04115 PF00589 Phage integrase family CLA_RS04115 PF13356 Domain of unknown function (DUF4102) CLA_RS04120 PF12728 Helix-turn-helix domain CLA_RS04160 PF07022 Bacteriophage CI repressor helix-turn-helix domain CLA_RS04175 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CLA_RS04180 PF07693 CLA_RS04180 CLA_RS04205 PF07087 CLA_RS04205 CLA_RS04215 PF14301 CLA_RS04215 CLA_RS04240 PF05135 Phage gp6-like head-tail connector protein CLA_RS04250 PF05065 Phage capsid family CLA_RS04255 PF04586 CLA_RS04255 CLA_RS04300 PF04860 Phage portal protein CLA_RS04305 PF09669 CLA_RS04305 CLA_RS04320 PF03354 CLA_RS04320 CLA_RS04325 PF05119 CLA_RS04325 CLA_RS04330 PF01844 HNH endonuclease CLA_RS04345 PF08279 HTH domain CLA_RS04345 PF13280 CLA_RS04345 CLA_RS04350 PF14281 CLA_RS04350 CLA_RS04360 PF04371 Porphyromonas-type peptidyl-arginine deiminase CLA_RS04370 PF00004 ATPase family associated with various cellular activities (AAA) CLA_RS04380 PF10117 CLA_RS04380 CLA_RS04400 PF14903 CLA_RS04400 CLA_RS04410 PF14281 CLA_RS04410 CLA_RS04420 PF14903 CLA_RS04420 CLA_RS04430 PF03235 CLA_RS04430 CLA_RS04430 PF07510 CLA_RS04430 CLA_RS04435 PF03235 CLA_RS04435 CLA_RS04440 PF02146 Sir2 family CLA_RS04450 PF02811 PHP domain CLA_RS04450 PF07733 Bacterial DNA polymerase III alpha subunit CLA_RS04450 PF14579 Helix-hairpin-helix motif CLA_RS04455 PF01965 DJ-1/PfpI family CLA_RS04460 PF00795 Carbon-nitrogen hydrolase CLA_RS04465 PF01545 Cation efflux family CLA_RS04465 PF16916 CLA_RS04465 CLA_RS04470 PF04371 Porphyromonas-type peptidyl-arginine deiminase CLA_RS04480 PF00753 Metallo-beta-lactamase superfamily CLA_RS04485 PF02540 NAD synthase CLA_RS04490 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CLA_RS04495 PF00291 Pyridoxal-phosphate dependent enzyme CLA_RS04495 PF14821 Threonine synthase N terminus CLA_RS04500 PF02348 Cytidylyltransferase CLA_RS04505 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLA_RS04510 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS04515 PF02683 CLA_RS04515 CLA_RS04515 PF11412 Disulphide bond corrector protein DsbC CLA_RS04515 PF13899 Thioredoxin-like CLA_RS04520 PF03473 MOSC domain CLA_RS04520 PF03475 3-alpha domain CLA_RS04525 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLA_RS04530 PF00209 Sodium:neurotransmitter symporter family CLA_RS04540 PF00691 OmpA family CLA_RS04545 PF01618 CLA_RS04545 CLA_RS04550 PF01116 Fructose-bisphosphate aldolase class-II CLA_RS04555 PF13616 PPIC-type PPIASE domain CLA_RS04560 PF00730 HhH-GPD superfamily base excision DNA repair protein CLA_RS04560 PF10576 Iron-sulfur binding domain of endonuclease III CLA_RS04565 PF03616 CLA_RS04565 CLA_RS04570 PF02321 Outer membrane efflux protein CLA_RS04575 PF00005 ABC transporter CLA_RS04575 PF02687 CLA_RS04575 CLA_RS04575 PF12704 MacB-like periplasmic core domain CLA_RS04580 PF16576 CLA_RS04580 CLA_RS04585 PF00881 Nitroreductase family CLA_RS04590 PF00501 AMP-binding enzyme CLA_RS04590 PF01553 Acyltransferase CLA_RS04590 PF07690 Major Facilitator Superfamily CLA_RS04595 PF13738 Pyridine nucleotide-disulphide oxidoreductase CLA_RS04600 PF05175 Methyltransferase small domain CLA_RS04605 PF03692 CLA_RS04605 CLA_RS04615 PF00218 Indole-3-glycerol phosphate synthase CLA_RS04620 PF01230 HIT domain CLA_RS04625 PF00581 Rhodanese-like domain CLA_RS04630 PF01384 CLA_RS04630 CLA_RS04635 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLA_RS04640 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CLA_RS04645 PF02541 Ppx/GppA phosphatase family CLA_RS04650 PF09424 Yqey-like protein CLA_RS04655 PF01223 DNA/RNA non-specific endonuclease CLA_RS04660 PF00012 Hsp70 protein CLA_RS04665 PF01025 GrpE CLA_RS04690 PF00771 FHIPEP family CLA_RS04695 PF02082 Transcriptional regulator CLA_RS04700 PF00312 Ribosomal protein S15 CLA_RS04705 PF01189 NOL1/NOP2/sun family CLA_RS04710 PF03652 Uncharacterised protein family (UPF0081) CLA_RS04715 PF02481 DNA recombination-mediator protein A CLA_RS04720 PF04748 Divergent polysaccharide deacetylase CLA_RS04725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLA_RS04725 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CLA_RS04730 PF00773 RNB domain CLA_RS04735 PF06144 DNA polymerase III, delta subunit CLA_RS04740 PF01250 Ribosomal protein S6 CLA_RS04745 PF00436 Single-strand binding protein family CLA_RS04750 PF01084 Ribosomal protein S18 CLA_RS04755 PF01914 CLA_RS04755 CLA_RS04775 PF03807 NADP oxidoreductase coenzyme F420-dependent CLA_RS04775 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLA_RS04780 PF02623 FliW protein CLA_RS04785 PF13525 Outer membrane lipoprotein CLA_RS04790 PF00004 ATPase family associated with various cellular activities (AAA) CLA_RS04790 PF02190 ATP-dependent protease La (LON) domain CLA_RS04790 PF05362 Lon protease (S16) C-terminal proteolytic domain CLA_RS04795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS04800 PF08447 PAS fold CLA_RS04805 PF08447 PAS fold CLA_RS04810 PF00291 Pyridoxal-phosphate dependent enzyme CLA_RS04815 PF13380 CoA binding domain CLA_RS04820 PF07690 Major Facilitator Superfamily CLA_RS04830 PF05958 tRNA (Uracil-5-)-methyltransferase CLA_RS04835 PF03553 CLA_RS04835 CLA_RS04840 PF00106 short chain dehydrogenase CLA_RS04845 PF12796 Ankyrin repeats (3 copies) CLA_RS04850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLA_RS04855 PF00892 EamA-like transporter family CLA_RS04860 PF01416 tRNA pseudouridine synthase CLA_RS04865 PF03739 CLA_RS04865 CLA_RS04870 PF06750 CLA_RS04870 CLA_RS04875 PF01255 Putative undecaprenyl diphosphate synthase CLA_RS04885 PF02441 Flavoprotein CLA_RS04885 PF04127 DNA / pantothenate metabolism flavoprotein CLA_RS04890 PF12804 MobA-like NTP transferase domain CLA_RS04890 PF14602 Hexapeptide repeat of succinyl-transferase CLA_RS04895 PF00813 CLA_RS04895 CLA_RS04900 PF03547 CLA_RS04900 CLA_RS04905 PF00425 chorismate binding enzyme CLA_RS04905 PF01063 Aminotransferase class IV CLA_RS04910 PF00117 Glutamine amidotransferase class-I CLA_RS04915 PF02321 Outer membrane efflux protein CLA_RS04920 PF16576 CLA_RS04920 CLA_RS04925 PF00873 AcrB/AcrD/AcrF family CLA_RS04930 PF03960 ArsC family CLA_RS04935 PF01474 Class-II DAHP synthetase family CLA_RS04945 PF01245 Ribosomal protein L19 CLA_RS04950 PF01746 tRNA (Guanine-1)-methyltransferase CLA_RS04955 PF01782 RimM N-terminal domain CLA_RS04955 PF05239 PRC-barrel domain CLA_RS04960 PF13083 KH domain CLA_RS04965 PF00886 Ribosomal protein S16 CLA_RS04970 PF00448 SRP54-type protein, GTPase domain CLA_RS04970 PF02881 SRP54-type protein, helical bundle domain CLA_RS04970 PF02978 Signal peptide binding domain CLA_RS04975 PF00849 RNA pseudouridylate synthase CLA_RS04980 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CLA_RS04985 PF02591 Putative zinc ribbon domain CLA_RS04990 PF01784 NIF3 (NGG1p interacting factor 3) CLA_RS04995 PF02091 Glycyl-tRNA synthetase alpha subunit CLA_RS05000 PF13118 CLA_RS05000 CLA_RS05005 PF00731 AIR carboxylase CLA_RS05010 PF01136 CLA_RS05010 CLA_RS05020 PF00120 Glutamine synthetase, catalytic domain CLA_RS05020 PF03951 Glutamine synthetase, beta-Grasp domain CLA_RS05025 PF00551 Formyl transferase CLA_RS05030 PF01743 Poly A polymerase head domain CLA_RS05045 PF07690 Major Facilitator Superfamily CLA_RS05050 PF03927 NapD protein CLA_RS05060 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CLA_RS05065 PF12801 CLA_RS05065 CLA_RS05065 PF13237 4Fe-4S dicluster domain CLA_RS05070 PF12838 4Fe-4S dicluster domain CLA_RS05075 PF00384 Molybdopterin oxidoreductase CLA_RS05075 PF01568 Molydopterin dinucleotide binding domain CLA_RS05075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLA_RS05080 PF00460 Flagella basal body rod protein CLA_RS05080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLA_RS05085 PF00460 Flagella basal body rod protein CLA_RS05085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLA_RS05090 PF00140 Sigma-70 factor, region 1 CLA_RS05090 PF04539 Sigma-70 region 3 CLA_RS05090 PF04542 Sigma-70 region 2 CLA_RS05090 PF04545 Sigma-70, region 4 CLA_RS05095 PF02503 Polyphosphate kinase middle domain CLA_RS05095 PF13089 Polyphosphate kinase N-terminal domain CLA_RS05095 PF13090 Polyphosphate kinase C-terminal domain CLA_RS05100 PF03264 NapC/NirT cytochrome c family, N-terminal region CLA_RS05105 PF02335 Cytochrome c552 CLA_RS05110 PF01964 ThiC family CLA_RS05115 PF00929 Exonuclease CLA_RS05120 PF00834 Ribulose-phosphate 3 epimerase family CLA_RS05125 PF00830 Ribosomal L28 family CLA_RS05130 PF02080 TrkA-C domain CLA_RS05130 PF02254 TrkA-N domain CLA_RS05130 PF07885 Ion channel CLA_RS05135 PF04325 Protein of unknown function (DUF465) CLA_RS05140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS05140 PF13682 Chemoreceptor zinc-binding domain CLA_RS05150 PF00118 TCP-1/cpn60 chaperonin family CLA_RS05155 PF00166 Chaperonin 10 Kd subunit CLA_RS05165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLA_RS05165 PF16321 CLA_RS05165 CLA_RS05170 PF00730 HhH-GPD superfamily base excision DNA repair protein CLA_RS05175 PF00270 DEAD/DEAH box helicase CLA_RS05175 PF00271 Helicase conserved C-terminal domain CLA_RS05175 PF02559 CarD-like/TRCF domain CLA_RS05175 PF03461 TRCF domain CLA_RS05180 PF04519 CLA_RS05180 CLA_RS05185 PF01551 Peptidase family M23 CLA_RS05190 PF08245 Mur ligase middle domain CLA_RS05200 PF04390 Lipopolysaccharide-assembly CLA_RS05205 PF00133 tRNA synthetases class I (I, L, M and V) CLA_RS05205 PF08264 Anticodon-binding domain of tRNA CLA_RS05205 PF09334 tRNA synthetases class I (M) CLA_RS05205 PF13603 Leucyl-tRNA synthetase, Domain 2 CLA_RS05215 PF02355 Protein export membrane protein CLA_RS05215 PF07549 SecD/SecF GG Motif CLA_RS05220 PF02355 Protein export membrane protein CLA_RS05220 PF07549 SecD/SecF GG Motif CLA_RS05225 PF02699 Preprotein translocase subunit CLA_RS05235 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLA_RS05235 PF02772 S-adenosylmethionine synthetase, central domain CLA_RS05235 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLA_RS05240 PF00375 Sodium:dicarboxylate symporter family CLA_RS05245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLA_RS05245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLA_RS05250 PF01432 Peptidase family M3 CLA_RS05250 PF08439 Oligopeptidase F CLA_RS05260 PF00580 UvrD/REP helicase N-terminal domain CLA_RS05260 PF13361 UvrD-like helicase C-terminal domain CLA_RS05265 PF01509 TruB family pseudouridylate synthase (N terminal domain) CLA_RS05270 PF02599 Global regulator protein family CLA_RS05275 PF00288 GHMP kinases N terminal domain CLA_RS05280 PF01668 SmpB protein CLA_RS05285 PF00085 Thioredoxin CLA_RS05290 PF02617 ATP-dependent Clp protease adaptor protein ClpS CLA_RS05295 PF00004 ATPase family associated with various cellular activities (AAA) CLA_RS05295 PF07724 AAA domain (Cdc48 subfamily) CLA_RS05295 PF10431 C-terminal, D2-small domain, of ClpB protein CLA_RS05300 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CLA_RS05310 PF00460 Flagella basal body rod protein CLA_RS05310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLA_RS05315 PF02049 CLA_RS05315 CLA_RS05320 PF00905 Penicillin binding protein transpeptidase domain CLA_RS05320 PF03717 Penicillin-binding Protein dimerisation domain CLA_RS05325 PF00762 Ferrochelatase CLA_RS05330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLA_RS05335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLA_RS05340 PF01411 tRNA synthetases class II (A) CLA_RS05340 PF02272 DHHA1 domain CLA_RS05340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLA_RS05345 PF02545 Maf-like protein CLA_RS05350 PF00905 Penicillin binding protein transpeptidase domain CLA_RS05350 PF00912 Transglycosylase CLA_RS05355 PF00174 Oxidoreductase molybdopterin binding domain CLA_RS05365 PF01593 Flavin containing amine oxidoreductase CLA_RS05365 PF13450 NAD(P)-binding Rossmann-like domain CLA_RS05370 PF00122 E1-E2 ATPase CLA_RS05370 PF00403 Heavy-metal-associated domain CLA_RS05370 PF00702 haloacid dehalogenase-like hydrolase CLA_RS05375 PF00403 Heavy-metal-associated domain CLA_RS05380 PF00893 Small Multidrug Resistance protein CLA_RS05385 PF00893 Small Multidrug Resistance protein CLA_RS05390 PF01709 Transcriptional regulator CLA_RS05395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLA_RS05405 PF09335 CLA_RS05405 CLA_RS05410 PF06738 CLA_RS05410 CLA_RS05415 PF12821 CLA_RS05415 CLA_RS05420 PF00750 tRNA synthetases class I (R) CLA_RS05420 PF03485 Arginyl tRNA synthetase N terminal domain CLA_RS05420 PF05746 DALR anticodon binding domain CLA_RS05425 PF02416 mttA/Hcf106 family CLA_RS05430 PF00625 Guanylate kinase CLA_RS05440 PF01311 CLA_RS05440 CLA_RS05445 PF00005 ABC transporter CLA_RS05450 PF00889 Elongation factor TS CLA_RS05455 PF00318 Ribosomal protein S2 CLA_RS05460 PF00034 Cytochrome c CLA_RS05465 PF00032 Cytochrome b(C-terminal)/b6/petD CLA_RS05465 PF00033 Cytochrome b(N-terminal)/b6/petB CLA_RS05470 PF00355 Rieske [2Fe-2S] domain CLA_RS05475 PF01134 Glucose inhibited division protein A CLA_RS05475 PF13932 GidA associated domain 3 CLA_RS05480 PF00677 Lumazine binding domain CLA_RS05485 PF02578 Multi-copper polyphenol oxidoreductase laccase CLA_RS05495 PF00512 His Kinase A (phospho-acceptor) domain CLA_RS05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLA_RS05500 PF00072 Response regulator receiver domain CLA_RS05500 PF00486 Transcriptional regulatory protein, C terminal CLA_RS05510 PF01814 Hemerythrin HHE cation binding domain CLA_RS05515 PF01402 Ribbon-helix-helix protein, copG family CLA_RS05520 PF05538 CLA_RS05520 CLA_RS05525 PF00034 Cytochrome c CLA_RS05530 PF13458 Periplasmic binding protein CLA_RS05535 PF13458 Periplasmic binding protein CLA_RS05540 PF02653 CLA_RS05540 CLA_RS05545 PF02653 CLA_RS05545 CLA_RS05550 PF00005 ABC transporter CLA_RS05550 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLA_RS05555 PF00005 ABC transporter CLA_RS05560 PF01578 CLA_RS05560 CLA_RS05560 PF05140 CLA_RS05560 CLA_RS05570 PF00009 Elongation factor Tu GTP binding domain CLA_RS05570 PF00679 Elongation factor G C-terminus CLA_RS05570 PF03144 Elongation factor Tu domain 2 CLA_RS05570 PF06421 GTP-binding protein LepA C-terminus CLA_RS05580 PF01554 MatE CLA_RS05585 PF02602 Uroporphyrinogen-III synthase HemD CLA_RS05590 PF02581 Thiamine monophosphate synthase/TENI CLA_RS05595 PF02110 Hydroxyethylthiazole kinase family CLA_RS05600 PF08543 Phosphomethylpyrimidine kinase CLA_RS05605 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLA_RS05615 PF02527 rRNA small subunit methyltransferase G CLA_RS05620 PF00925 GTP cyclohydrolase II CLA_RS05625 PF00490 Delta-aminolevulinic acid dehydratase CLA_RS05630 PF10788 CLA_RS05630 CLA_RS05635 PF04055 Radical SAM superfamily CLA_RS05635 PF06969 HemN C-terminal domain CLA_RS05640 PF02754 CLA_RS05640 CLA_RS05640 PF13534 4Fe-4S dicluster domain CLA_RS05650 PF00842 Alanine racemase, C-terminal domain CLA_RS05650 PF01168 Alanine racemase, N-terminal domain CLA_RS05655 PF03734 L,D-transpeptidase catalytic domain CLA_RS05660 PF04314 Protein of unknown function (DUF461) CLA_RS05670 PF02630 SCO1/SenC CLA_RS05675 PF02687 CLA_RS05675 CLA_RS05685 PF02169 LPP20 lipoprotein CLA_RS05690 PF00521 DNA gyrase/topoisomerase IV, subunit A CLA_RS05690 PF03989 DNA gyrase C-terminal domain, beta-propeller CLA_RS05705 PF00939 Sodium:sulfate symporter transmembrane region CLA_RS05710 PF02581 Thiamine monophosphate synthase/TENI CLA_RS05715 PF04055 Radical SAM superfamily CLA_RS05715 PF06968 Biotin and Thiamin Synthesis associated domain CLA_RS05720 PF05690 Thiazole biosynthesis protein ThiG CLA_RS05725 PF00899 ThiF family CLA_RS05725 PF14453 CLA_RS05725 CLA_RS05730 PF02597 ThiS family CLA_RS05740 PF01546 Peptidase family M20/M25/M40 CLA_RS05740 PF07687 Peptidase dimerisation domain CLA_RS05745 PF01810 CLA_RS05745 CLA_RS05750 PF02146 Sir2 family CLA_RS05755 PF00488 MutS domain V CLA_RS05755 PF01713 Smr domain CLA_RS05765 PF01225 Mur ligase family, catalytic domain CLA_RS05765 PF02875 Mur ligase family, glutamate ligase domain CLA_RS05765 PF08245 Mur ligase middle domain CLA_RS05770 PF00795 Carbon-nitrogen hydrolase CLA_RS05775 PF02609 Exonuclease VII small subunit CLA_RS05780 PF00478 IMP dehydrogenase / GMP reductase domain CLA_RS05780 PF00571 CBS domain CLA_RS05785 PF01425 Amidase CLA_RS05790 PF00133 tRNA synthetases class I (I, L, M and V) CLA_RS05790 PF08264 Anticodon-binding domain of tRNA CLA_RS05795 PF02464 Competence-damaged protein CLA_RS05800 PF00578 AhpC/TSA family CLA_RS05805 PF00578 AhpC/TSA family CLA_RS05810 PF00005 ABC transporter CLA_RS05815 PF02687 CLA_RS05815 CLA_RS05815 PF12704 MacB-like periplasmic core domain CLA_RS05820 PF02687 CLA_RS05820 CLA_RS05820 PF12704 MacB-like periplasmic core domain CLA_RS05825 PF04945 YHS domain CLA_RS05825 PF10080 CLA_RS05825 CLA_RS05830 PF10634 Fe2+ transport protein CLA_RS05835 PF03239 CLA_RS05835 CLA_RS05840 PF01063 Aminotransferase class IV CLA_RS05845 PF05686 CLA_RS05845 CLA_RS05860 PF01795 MraW methylase family CLA_RS05865 PF00596 Class II Aldolase and Adducin N-terminal domain CLA_RS05870 PF13145 PPIC-type PPIASE domain CLA_RS05870 PF13624 SurA N-terminal domain CLA_RS05875 PF02491 SHS2 domain inserted in FTSA CLA_RS05875 PF14450 Cell division protein FtsA CLA_RS05880 PF00091 Tubulin/FtsZ family, GTPase domain CLA_RS05880 PF12327 FtsZ family, C-terminal domain CLA_RS05885 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLA_RS05890 PF04551 GcpE protein CLA_RS05895 PF00270 DEAD/DEAH box helicase CLA_RS05895 PF00271 Helicase conserved C-terminal domain CLA_RS05900 PF07963 Prokaryotic N-terminal methylation motif CLA_RS05915 PF00271 Helicase conserved C-terminal domain CLA_RS05915 PF02151 UvrB/uvrC motif CLA_RS05915 PF04851 Type III restriction enzyme, res subunit CLA_RS05915 PF12344 Ultra-violet resistance protein B CLA_RS05920 PF01132 Elongation factor P (EF-P) OB domain CLA_RS05920 PF08207 Elongation factor P (EF-P) KOW-like domain CLA_RS05920 PF09285 Elongation factor P, C-terminal CLA_RS05925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLA_RS05925 PF01842 ACT domain CLA_RS05925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLA_RS05940 PF02401 LytB protein CLA_RS05945 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLA_RS05950 PF01588 Putative tRNA binding domain CLA_RS05950 PF03147 Ferredoxin-fold anticodon binding domain CLA_RS05950 PF03483 B3/4 domain CLA_RS05950 PF03484 tRNA synthetase B5 domain CLA_RS05955 PF01409 tRNA synthetases class II core domain (F) CLA_RS05955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CLA_RS05960 PF01230 HIT domain CLA_RS05965 PF01293 Phosphoenolpyruvate carboxykinase CLA_RS05970 PF00364 Biotin-requiring enzyme CLA_RS05970 PF00682 HMGL-like CLA_RS05970 PF02436 Conserved carboxylase domain CLA_RS05975 PF00209 Sodium:neurotransmitter symporter family CLA_RS05980 PF00209 Sodium:neurotransmitter symporter family CLA_RS05985 PF00209 Sodium:neurotransmitter symporter family CLA_RS05990 PF00137 ATP synthase subunit C CLA_RS06005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS06005 PF13426 PAS domain CLA_RS06010 PF01979 Amidohydrolase family CLA_RS06015 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLA_RS06015 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLA_RS06020 PF02637 GatB domain CLA_RS06020 PF02934 GatB/GatE catalytic domain CLA_RS06025 PF00119 ATP synthase A chain CLA_RS06030 PF01593 Flavin containing amine oxidoreductase CLA_RS06035 PF13481 AAA domain CLA_RS06035 PF13541 Subunit ChlI of Mg-chelatase CLA_RS06040 PF00448 SRP54-type protein, GTPase domain CLA_RS06045 PF13905 Thioredoxin-like CLA_RS06050 PF01812 5-formyltetrahydrofolate cyclo-ligase family CLA_RS06055 PF01966 HD domain CLA_RS06055 PF12072 CLA_RS06055 CLA_RS06060 PF09335 CLA_RS06060 CLA_RS06065 PF03772 CLA_RS06065 CLA_RS06070 PF03631 CLA_RS06070 CLA_RS06075 PF01565 FAD binding domain CLA_RS06075 PF02913 FAD linked oxidases, C-terminal domain CLA_RS06080 PF15436 CLA_RS06080 CLA_RS06085 PF01551 Peptidase family M23 CLA_RS06090 PF00571 CBS domain CLA_RS06090 PF01769 Divalent cation transporter CLA_RS06090 PF03448 MgtE intracellular N domain CLA_RS06095 PF08534 Redoxin CLA_RS06100 PF00772 DnaB-like helicase N terminal domain CLA_RS06100 PF03796 DnaB-like helicase C terminal domain CLA_RS06105 PF00291 Pyridoxal-phosphate dependent enzyme CLA_RS06110 PF00216 Bacterial DNA-binding protein CLA_RS06115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLA_RS06120 PF00535 Glycosyl transferase family 2 CLA_RS06125 PF13561 Enoyl-(Acyl carrier protein) reductase CLA_RS06130 PF02348 Cytidylyltransferase CLA_RS06140 PF00483 Nucleotidyl transferase CLA_RS06140 PF00571 CBS domain CLA_RS06150 PF00551 Formyl transferase CLA_RS06150 PF02911 Formyl transferase, C-terminal domain CLA_RS06155 PF02350 UDP-N-acetylglucosamine 2-epimerase CLA_RS06160 PF03102 NeuB family CLA_RS06160 PF08666 SAF domain CLA_RS06165 PF00551 Formyl transferase CLA_RS06165 PF02911 Formyl transferase, C-terminal domain CLA_RS06170 PF16363 CLA_RS06170 CLA_RS06185 PF00535 Glycosyl transferase family 2 CLA_RS06190 PF00535 Glycosyl transferase family 2 CLA_RS06195 PF00535 Glycosyl transferase family 2 CLA_RS06200 PF00535 Glycosyl transferase family 2 CLA_RS06205 PF05704 CLA_RS06205 CLA_RS06210 PF00535 Glycosyl transferase family 2 CLA_RS06215 PF00535 Glycosyl transferase family 2 CLA_RS06215 PF02709 N-terminal domain of galactosyltransferase CLA_RS06220 PF03279 CLA_RS06220 CLA_RS06225 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLA_RS06230 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB CLA_RS06235 PF01370 NAD dependent epimerase/dehydratase family CLA_RS06240 PF00005 ABC transporter CLA_RS06240 PF00664 ABC transporter transmembrane region CLA_RS06245 PF00534 Glycosyl transferases group 1 CLA_RS06245 PF13439 Glycosyltransferase Family 4 CLA_RS06250 PF00534 Glycosyl transferases group 1 CLA_RS06250 PF13439 Glycosyltransferase Family 4 CLA_RS06255 PF02516 Oligosaccharyl transferase STT3 subunit CLA_RS06260 PF00534 Glycosyl transferases group 1 CLA_RS06260 PF13477 Glycosyl transferase 4-like CLA_RS06265 PF02397 CLA_RS06265 CLA_RS06270 PF14602 Hexapeptide repeat of succinyl-transferase CLA_RS06275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLA_RS06280 PF02719 Polysaccharide biosynthesis protein CLA_RS06285 PF00072 Response regulator receiver domain CLA_RS06290 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CLA_RS06295 PF00004 ATPase family associated with various cellular activities (AAA) CLA_RS06295 PF01434 Peptidase family M41 CLA_RS06295 PF06480 FtsH Extracellular CLA_RS06300 PF02666 CLA_RS06300 CLA_RS06305 PF01066 CDP-alcohol phosphatidyltransferase CLA_RS06320 PF00817 impB/mucB/samB family CLA_RS06320 PF11799 impB/mucB/samB family C-terminal domain CLA_RS06335 PF03061 Thioesterase superfamily CLA_RS06340 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLA_RS06340 PF14572 Phosphoribosyl synthetase-associated domain CLA_RS06355 PF05491 Holliday junction DNA helicase ruvB C-terminus CLA_RS06355 PF05496 Holliday junction DNA helicase ruvB N-terminus CLA_RS06360 PF01594 CLA_RS06360 CLA_RS06365 PF07690 Major Facilitator Superfamily CLA_RS06370 PF01725 Ham1 family CLA_RS06375 PF03176 MMPL family CLA_RS06380 PF05494 Toluene tolerance, Ttg2 CLA_RS06385 PF04333 CLA_RS06385 CLA_RS06390 PF13531 Bacterial extracellular solute-binding protein CLA_RS06400 PF00005 ABC transporter CLA_RS06405 PF12838 4Fe-4S dicluster domain CLA_RS06405 PF13237 4Fe-4S dicluster domain CLA_RS06410 PF03841 L-seryl-tRNA selenium transferase CLA_RS06415 PF00009 Elongation factor Tu GTP binding domain CLA_RS06415 PF09107 Elongation factor SelB, winged helix CLA_RS06420 PF13098 Thioredoxin-like domain CLA_RS06430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLA_RS06430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLA_RS06435 PF02621 Menaquinone biosynthesis CLA_RS06440 PF00390 Malic enzyme, N-terminal domain CLA_RS06440 PF03949 Malic enzyme, NAD binding domain CLA_RS06445 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLA_RS06450 PF09312 SurA N-terminal domain CLA_RS06455 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CLA_RS06455 PF02785 Biotin carboxylase C-terminal domain CLA_RS06455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLA_RS06460 PF00364 Biotin-requiring enzyme CLA_RS06465 PF00692 dUTPase CLA_RS06470 PF02719 Polysaccharide biosynthesis protein CLA_RS06475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLA_RS06480 PF09940 Domain of unknown function (DUF2172) CLA_RS06480 PF16221 CLA_RS06480 CLA_RS06480 PF16254 CLA_RS06480 CLA_RS06485 PF02522 Aminoglycoside 3-N-acetyltransferase CLA_RS06495 PF08242 Methyltransferase domain CLA_RS06505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLA_RS06505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLA_RS06515 PF11144 CLA_RS06515 CLA_RS06520 PF11144 CLA_RS06520 CLA_RS06530 PF00501 AMP-binding enzyme CLA_RS06535 PF00551 Formyl transferase CLA_RS06545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLA_RS06570 PF11144 CLA_RS06570 CLA_RS06575 PF02348 Cytidylyltransferase CLA_RS06585 PF13420 Acetyltransferase (GNAT) domain CLA_RS06595 PF02585 GlcNAc-PI de-N-acetylase CLA_RS06600 PF13420 Acetyltransferase (GNAT) domain CLA_RS06605 PF00977 Histidine biosynthesis protein CLA_RS06610 PF00117 Glutamine amidotransferase class-I CLA_RS06620 PF01925 CLA_RS06620 CLA_RS06625 PF01312 FlhB HrpN YscU SpaS Family CLA_RS06630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS06630 PF02743 Cache domain CLA_RS06635 PF00578 AhpC/TSA family CLA_RS06635 PF10417 C-terminal domain of 1-Cys peroxiredoxin CLA_RS06640 PF12838 4Fe-4S dicluster domain CLA_RS06645 PF00334 Nucleoside diphosphate kinase CLA_RS06655 PF01783 Ribosomal L32p protein family CLA_RS06660 PF02504 Fatty acid synthesis protein CLA_RS06665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLA_RS06665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLA_RS06670 PF00691 OmpA family CLA_RS06670 PF13677 CLA_RS06670 CLA_RS06675 PF01618 CLA_RS06675 CLA_RS06680 PF00476 DNA polymerase family A CLA_RS06680 PF01367 5'-3' exonuclease, C-terminal SAM fold CLA_RS06680 PF01612 3'-5' exonuclease CLA_RS06680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLA_RS06685 PF00083 Sugar (and other) transporter CLA_RS06690 PF01156 Inosine-uridine preferring nucleoside hydrolase CLA_RS06695 PF09335 CLA_RS06695 CLA_RS06700 PF00291 Pyridoxal-phosphate dependent enzyme CLA_RS06705 PF02600 Disulfide bond formation protein DsbB CLA_RS06710 PF00005 ABC transporter CLA_RS06715 PF02554 CLA_RS06715 CLA_RS06715 PF13722 CLA_RS06715 CLA_RS06720 PF04328 CLA_RS06720 CLA_RS06725 PF00266 Aminotransferase class-V CLA_RS06730 PF02601 CLA_RS06730 CLA_RS06730 PF13742 CLA_RS06730 CLA_RS06735 PF01209 ubiE/COQ5 methyltransferase family CLA_RS06745 PF01475 Ferric uptake regulator family CLA_RS06750 PF02779 Transketolase, pyrimidine binding domain CLA_RS06750 PF02780 Transketolase, C-terminal domain CLA_RS06750 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLA_RS06755 PF02108 CLA_RS06755 CLA_RS06760 PF01706 FliG C-terminal domain CLA_RS06760 PF14841 FliG middle domain CLA_RS06760 PF14842 FliG N-terminal domain CLA_RS06765 PF01514 Secretory protein of YscJ/FliF family CLA_RS06765 PF08345 CLA_RS06765 CLA_RS06770 PF00155 Aminotransferase class I and II CLA_RS06775 PF00800 Prephenate dehydratase CLA_RS06775 PF01817 Chorismate mutase type II CLA_RS06780 PF13242 HAD-hyrolase-like CLA_RS06780 PF13344 Haloacid dehalogenase-like hydrolase CLA_RS06785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLA_RS06785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLA_RS06790 PF03739 CLA_RS06790 CLA_RS06795 PF01195 Peptidyl-tRNA hydrolase CLA_RS06800 PF01386 Ribosomal L25p family CLA_RS06800 PF14693 Ribosomal protein TL5, C-terminal domain CLA_RS06805 PF00923 Transaldolase CLA_RS06810 PF00702 haloacid dehalogenase-like hydrolase CLA_RS06815 PF01584 CheW-like domain CLA_RS06820 PF00072 Response regulator receiver domain CLA_RS06820 PF01584 CheW-like domain CLA_RS06820 PF01627 Hpt domain CLA_RS06820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLA_RS06820 PF02895 Signal transducing histidine kinase, homodimeric domain CLA_RS06825 PF00072 Response regulator receiver domain CLA_RS06825 PF01584 CheW-like domain CLA_RS06835 PF01272 Transcription elongation factor, GreA/GreB, C-term CLA_RS06835 PF03449 Transcription elongation factor, N-terminal CLA_RS06840 PF02684 CLA_RS06840 CLA_RS06845 PF03498 Cytolethal distending toxin A/C family CLA_RS06850 PF03372 Endonuclease/Exonuclease/phosphatase family CLA_RS06855 PF03498 Cytolethal distending toxin A/C family CLA_RS06860 PF01546 Peptidase family M20/M25/M40 CLA_RS06865 PF03606 CLA_RS06865 CLA_RS06870 PF03575 Peptidase family S51 CLA_RS06875 PF13531 Bacterial extracellular solute-binding protein CLA_RS06880 PF01975 Survival protein SurE CLA_RS06885 PF00899 ThiF family CLA_RS06890 PF00905 Penicillin binding protein transpeptidase domain CLA_RS06895 PF02517 CAAX protease self-immunity CLA_RS06900 PF13489 Methyltransferase domain CLA_RS06905 PF04301 CLA_RS06905 CLA_RS06910 PF00155 Aminotransferase class I and II CLA_RS06915 PF08238 Sel1 repeat CLA_RS06920 PF00202 Aminotransferase class-III CLA_RS06925 PF13500 AAA domain CLA_RS06930 PF00893 Small Multidrug Resistance protein CLA_RS06935 PF00893 Small Multidrug Resistance protein CLA_RS06940 PF01112 Asparaginase CLA_RS06950 PF02142 MGS-like domain CLA_RS06950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLA_RS06950 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLA_RS06955 PF04085 rod shape-determining protein MreC CLA_RS06960 PF06723 MreB/Mbl protein CLA_RS06965 PF06689 ClpX C4-type zinc finger CLA_RS06965 PF07724 AAA domain (Cdc48 subfamily) CLA_RS06965 PF10431 C-terminal, D2-small domain, of ClpB protein CLA_RS06970 PF00132 Bacterial transferase hexapeptide (six repeats) CLA_RS06970 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CLA_RS06975 PF07977 FabA-like domain CLA_RS06980 PF02677 CLA_RS06980 CLA_RS06985 PF00578 AhpC/TSA family CLA_RS06990 PF01361 Tautomerase enzyme CLA_RS06995 PF01063 Aminotransferase class IV CLA_RS07000 PF01145 SPFH domain / Band 7 family CLA_RS07010 PF09624 CLA_RS07010 CLA_RS07015 PF00156 Phosphoribosyl transferase domain CLA_RS07015 PF13537 Glutamine amidotransferase domain CLA_RS07020 PF01113 Dihydrodipicolinate reductase, N-terminus CLA_RS07020 PF05173 Dihydrodipicolinate reductase, C-terminus CLA_RS07025 PF11396 Protein of unknown function (DUF2874) CLA_RS07030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLA_RS07035 PF00085 Thioredoxin CLA_RS07040 PF02021 Uncharacterised protein family UPF0102 CLA_RS07045 PF00742 Homoserine dehydrogenase CLA_RS07045 PF01842 ACT domain CLA_RS07045 PF03447 Homoserine dehydrogenase, NAD binding domain CLA_RS07050 PF00155 Aminotransferase class I and II CLA_RS07065 PF00588 SpoU rRNA Methylase family CLA_RS07065 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLA_RS07070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLA_RS07075 PF01197 Ribosomal protein L31 CLA_RS07080 PF04452 RNA methyltransferase CLA_RS07095 PF01242 6-pyruvoyl tetrahydropterin synthase CLA_RS07100 PF13394 4Fe-4S single cluster domain CLA_RS07105 PF04055 Radical SAM superfamily CLA_RS07105 PF06463 Molybdenum Cofactor Synthesis C CLA_RS07105 PF13394 4Fe-4S single cluster domain CLA_RS07120 PF01040 UbiA prenyltransferase family CLA_RS07125 PF01715 IPP transferase CLA_RS07135 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CLA_RS07140 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CLA_RS07145 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CLA_RS07145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CLA_RS07150 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CLA_RS07155 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CLA_RS07160 PF12838 4Fe-4S dicluster domain CLA_RS07165 PF00146 NADH dehydrogenase CLA_RS07170 PF00037 4Fe-4S binding domain CLA_RS07170 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLA_RS07170 PF13510 2Fe-2S iron-sulfur cluster binding domain CLA_RS07180 PF16514 CLA_RS07180 CLA_RS07185 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CLA_RS07190 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLA_RS07195 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLA_RS07200 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CLA_RS07205 PF00005 ABC transporter CLA_RS07210 PF00005 ABC transporter CLA_RS07215 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS07220 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS07225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLA_RS07230 PF02028 BCCT family transporter CLA_RS07235 PF02589 Uncharacterised ACR, YkgG family COG1556 CLA_RS07240 PF02589 Uncharacterised ACR, YkgG family COG1556 CLA_RS07240 PF11870 CLA_RS07240 CLA_RS07240 PF13183 4Fe-4S dicluster domain CLA_RS07245 PF02754 CLA_RS07245 CLA_RS07250 PF02652 CLA_RS07250 CLA_RS07260 PF07669 Eco57I restriction-modification methylase CLA_RS07260 PF12950 TaqI-like C-terminal specificity domain CLA_RS07270 PF00384 Molybdopterin oxidoreductase CLA_RS07270 PF01568 Molydopterin dinucleotide binding domain CLA_RS07275 PF05970 CLA_RS07275 CLA_RS07330 PF03741 CLA_RS07330 CLA_RS07335 PF00551 Formyl transferase CLA_RS07340 PF01256 Carbohydrate kinase CLA_RS07340 PF03853 YjeF-related protein N-terminus CLA_RS07345 PF02646 CLA_RS07345 CLA_RS07350 PF01936 NYN domain CLA_RS07355 PF01078 Magnesium chelatase, subunit ChlI CLA_RS07355 PF13335 CLA_RS07355 CLA_RS07355 PF13541 Subunit ChlI of Mg-chelatase CLA_RS07360 PF01327 Polypeptide deformylase CLA_RS07365 PF00990 GGDEF domain CLA_RS07370 PF00574 Clp protease CLA_RS07375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLA_RS07375 PF05697 Bacterial trigger factor protein (TF) CLA_RS07375 PF05698 Bacterial trigger factor protein (TF) C-terminus CLA_RS07380 PF01227 GTP cyclohydrolase I CLA_RS07385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLA_RS07405 PF00266 Aminotransferase class-V CLA_RS07410 PF01106 NifU-like domain CLA_RS07410 PF01592 NifU-like N terminal domain CLA_RS07410 PF04324 BFD-like [2Fe-2S] binding domain CLA_RS07415 PF06965 Na+/H+ antiporter 1 CLA_RS07420 PF06965 Na+/H+ antiporter 1 CLA_RS07430 PF03458 CLA_RS07430 CLA_RS07440 PF01264 Chorismate synthase CLA_RS07445 PF00035 Double-stranded RNA binding motif CLA_RS07445 PF14622 Ribonuclease-III-like CLA_RS07450 PF00075 RNase H CLA_RS07460 PF01807 CHC2 zinc finger CLA_RS07460 PF08275 DNA primase catalytic core, N-terminal domain CLA_RS07460 PF13662 Toprim domain CLA_RS07465 PF02568 Thiamine biosynthesis protein (ThiI) CLA_RS07470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS07475 PF00905 Penicillin binding protein transpeptidase domain CLA_RS07475 PF00912 Transglycosylase CLA_RS07475 PF06832 CLA_RS07475 CLA_RS07480 PF00207 Alpha-2-macroglobulin family CLA_RS07480 PF01835 MG2 domain CLA_RS07480 PF07703 Alpha-2-macroglobulin family N-terminal region CLA_RS07480 PF11974 Alpha-2-macroglobulin MG1 domain CLA_RS07495 PF00924 Mechanosensitive ion channel CLA_RS07500 PF00484 Carbonic anhydrase CLA_RS07505 PF01027 Inhibitor of apoptosis-promoting Bax1 CLA_RS07510 PF03840 Preprotein translocase SecG subunit CLA_RS07515 PF01765 Ribosome recycling factor CLA_RS07520 PF00156 Phosphoribosyl transferase domain CLA_RS07525 PF06271 CLA_RS07525 CLA_RS07530 PF00268 Ribonucleotide reductase, small chain CLA_RS07540 PF02600 Disulfide bond formation protein DsbB CLA_RS07545 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) CLA_RS07550 PF00194 Eukaryotic-type carbonic anhydrase CLA_RS07560 PF00009 Elongation factor Tu GTP binding domain CLA_RS07560 PF00679 Elongation factor G C-terminus CLA_RS07560 PF03144 Elongation factor Tu domain 2 CLA_RS07570 PF02120 Flagellar hook-length control protein FliK CLA_RS07580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLA_RS07590 PF13023 HD domain CLA_RS07595 PF02661 Fic/DOC family CLA_RS07600 PF00005 ABC transporter CLA_RS07605 PF00528 Binding-protein-dependent transport system inner membrane component CLA_RS07610 PF13343 Bacterial extracellular solute-binding protein CLA_RS07615 PF00042 Globin CLA_RS07620 PF00005 ABC transporter CLA_RS07620 PF00664 ABC transporter transmembrane region CLA_RS07635 PF05860 haemagglutination activity domain CLA_RS07640 PF08479 POTRA domain, ShlB-type CLA_RS07650 PF00814 Glycoprotease family CLA_RS07655 PF17033 CLA_RS07655 CLA_RS07655 PF17129 CLA_RS07655 CLA_RS07660 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLA_RS07660 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CLA_RS07660 PF13288 DXP reductoisomerase C-terminal domain CLA_RS07665 PF01148 Cytidylyltransferase family CLA_RS07675 PF05670 CLA_RS07675 CLA_RS07675 PF05833 Fibronectin-binding protein A N-terminus (FbpA) CLA_RS07680 PF12804 MobA-like NTP transferase domain CLA_RS07685 PF03553 CLA_RS07685 CLA_RS07685 PF13726 CLA_RS07685 CLA_RS07690 PF00920 Dehydratase family CLA_RS07715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS07715 PF02743 Cache domain CLA_RS07720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLA_RS07720 PF02743 Cache domain CLA_RS07725 PF11396 Protein of unknown function (DUF2874) CLA_RS07730 PF00004 ATPase family associated with various cellular activities (AAA) CLA_RS07740 PF04461 Protein of unknown function (DUF520) CLA_RS07745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLA_RS07745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLA_RS07750 PF03738 Glutathionylspermidine synthase preATP-grasp CLA_RS07760 PF01810 CLA_RS07760 CLA_RS07765 PF01165 Ribosomal protein S21 CLA_RS07770 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CLA_RS07770 PF12801 CLA_RS07770 CLA_RS07770 PF13746 4Fe-4S dicluster domain CLA_RS07775 PF00440 Bacterial regulatory proteins, tetR family CLA_RS07780 PF16576 CLA_RS07780 CLA_RS07785 PF00873 AcrB/AcrD/AcrF family CLA_RS07790 PF02321 Outer membrane efflux protein CLA_RS07800 PF04055 Radical SAM superfamily CLA_RS07805 PF13489 Methyltransferase domain CLA_RS07810 PF03653 CLA_RS07810 CLA_RS07815 PF01252 CLA_RS07815 CLA_RS07820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLA_RS07820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLA_RS07820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLA_RS07825 PF06097 CLA_RS07825 CLA_RS07830 PF05496 Holliday junction DNA helicase ruvB N-terminus CLA_RS07830 PF12002 MgsA AAA+ ATPase C terminal CLA_RS07830 PF16193 CLA_RS07830 CLA_RS07840 PF03713 Domain of unknown function (DUF305) CLA_RS07850 PF02075 Crossover junction endodeoxyribonuclease RuvC CLA_RS07860 PF03372 Endonuclease/Exonuclease/phosphatase family CLA_RS07865 PF00308 Bacterial dnaA protein CLA_RS07865 PF08299 Bacterial dnaA protein helix-turn-helix CLA_RS07865 PF11638 DnaA N-terminal domain CLA_RS08005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLA_RS08075 PF08019 CLA_RS08075 CLA_RS08085 PF01464 Transglycosylase SLT domain CLA_RS08095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLA_RS08100 PF03382 CLA_RS08100 CLA_RS08110 PF11186 CLA_RS08110 CLA_RS08125 PF03748 CLA_RS08125 CLA_RS08130 PF00691 OmpA family CLA_RS08135 PF02465 CLA_RS08135 CLA_RS08135 PF07195 CLA_RS08135 CLA_RS08135 PF07196 Flagellin hook IN motif CLA_RS08140 PF00929 Exonuclease CLA_RS08150 PF07728 AAA domain (dynein-related subfamily) CLA_RS08170 PF09624 CLA_RS08170 CLA_RS08175 PF03963 CLA_RS08175 CLA_RS08175 PF13860 FlgD Ig-like domain