CLA_RS00010 SM00382 ATPases associated with a variety of cellular activities CLA_RS00010 SM00760 Bacterial dnaA protein helix-turn-helix domain CLA_RS00015 SM00480 DNA polymerase III beta subunit CLA_RS00020 SM00387 Histidine kinase-like ATPases CLA_RS00020 SM00433 TopoisomeraseII CLA_RS00080 SM00937 CLA_RS00080 CLA_RS00090 SM00363 S4 RNA-binding domain CLA_RS00095 SM00849 Metallo-beta-lactamase superfamily CLA_RS00100 SM00650 Ribosomal RNA adenine dimethylases CLA_RS00110 SM00729 Elongator protein 3, MiaB family, Radical SAM CLA_RS00125 SM00998 Adenylosuccinate lyase C-terminus CLA_RS00145 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLA_RS00195 SM00382 ATPases associated with a variety of cellular activities CLA_RS00280 SM00047 Lysozyme subfamily 2 CLA_RS00295 SM01403 CLA_RS00295 CLA_RS00315 SM01382 CLA_RS00315 CLA_RS00315 SM01383 CLA_RS00315 CLA_RS00330 SM00322 K homology RNA-binding domain CLA_RS00350 SM01374 CLA_RS00350 CLA_RS00355 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CLA_RS00405 SM00870 CLA_RS00405 CLA_RS00440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS00470 SM00363 S4 RNA-binding domain CLA_RS00470 SM01390 CLA_RS00470 CLA_RS00475 SM00662 RNA polymerases D CLA_RS00525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS00570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLA_RS00580 SM00861 Transketolase, pyrimidine binding domain CLA_RS00590 SM00382 ATPases associated with a variety of cellular activities CLA_RS00615 SM00342 helix_turn_helix, arabinose operon control protein CLA_RS00630 SM00986 Uracil DNA glycosylase superfamily CLA_RS00630 SM00987 UreE urease accessory protein, C-terminal domain CLA_RS00640 SM00448 cheY-homologous receiver domain CLA_RS00640 SM00862 Transcriptional regulatory protein, C terminal CLA_RS00655 SM00478 endonuclease III CLA_RS00705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS00760 SM01192 CLA_RS00760 CLA_RS00760 SM01193 CLA_RS00760 CLA_RS00765 SM00382 ATPases associated with a variety of cellular activities CLA_RS00800 SM00729 Elongator protein 3, MiaB family, Radical SAM CLA_RS00800 SM00876 Biotin and Thiamin Synthesis associated domain CLA_RS00805 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CLA_RS00805 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CLA_RS00805 SM00493 CLA_RS00805 CLA_RS00845 SM00858 CLA_RS00845 CLA_RS00875 SM00448 cheY-homologous receiver domain CLA_RS00875 SM00862 Transcriptional regulatory protein, C terminal CLA_RS00880 SM00905 Dihydroneopterin aldolase CLA_RS00885 SM01207 CLA_RS00885 CLA_RS00945 SM00470 ParB-like nuclease domain CLA_RS00975 SM00382 ATPases associated with a variety of cellular activities CLA_RS01020 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CLA_RS01165 SM00382 ATPases associated with a variety of cellular activities CLA_RS01165 SM00962 SRP54-type protein, GTPase domain CLA_RS01220 SM00448 cheY-homologous receiver domain CLA_RS01270 SM00382 ATPases associated with a variety of cellular activities CLA_RS01290 SM00729 Elongator protein 3, MiaB family, Radical SAM CLA_RS01295 SM00937 CLA_RS01295 CLA_RS01345 SM00822 CLA_RS01345 CLA_RS01365 SM01060 CLA_RS01365 CLA_RS01370 SM00248 ankyrin repeats CLA_RS01400 SM00998 Adenylosuccinate lyase C-terminus CLA_RS01410 SM00899 CLA_RS01410 CLA_RS01430 SM00825 Beta-ketoacyl synthase CLA_RS01465 SM00116 Domain in cystathionine beta-synthase and other proteins. CLA_RS01480 SM00028 Tetratricopeptide repeats CLA_RS01625 SM00729 Elongator protein 3, MiaB family, Radical SAM CLA_RS01710 SM00829 Enoylreductase CLA_RS01715 SM00487 DEAD-like helicases superfamily CLA_RS01745 SM00852 Probable molybdopterin binding domain CLA_RS01785 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CLA_RS01840 SM00788 Adenylosuccinate synthetase CLA_RS01860 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CLA_RS01915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS01940 SM00890 Domain of unknown function CLA_RS01960 SM00382 ATPases associated with a variety of cellular activities CLA_RS02085 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLA_RS02100 SM00028 Tetratricopeptide repeats CLA_RS02220 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CLA_RS02225 SM00649 Ribosomal protein L11/L12 CLA_RS02250 SM00663 RNA polymerase I subunit A N-terminus CLA_RS02265 SM00838 Elongation factor G C-terminus CLA_RS02265 SM00889 Elongation factor G, domain IV CLA_RS02270 SM00116 Domain in cystathionine beta-synthase and other proteins. CLA_RS02270 SM01091 Transporter associated domain CLA_RS02345 SM00382 ATPases associated with a variety of cellular activities CLA_RS02350 SM00357 Cold shock protein domain CLA_RS02350 SM00382 ATPases associated with a variety of cellular activities CLA_RS02350 SM00959 Rho termination factor, N-terminal domain CLA_RS02460 SM00271 DnaJ molecular chaperone homology domain CLA_RS02465 SM00448 cheY-homologous receiver domain CLA_RS02465 SM00862 Transcriptional regulatory protein, C terminal CLA_RS02470 SM00387 Histidine kinase-like ATPases CLA_RS02485 SM00465 GIY-YIG type nucleases (URI domain) CLA_RS02515 SM01209 CLA_RS02515 CLA_RS02515 SM01210 CLA_RS02515 CLA_RS02535 SM00316 Ribosomal protein S1-like RNA-binding domain CLA_RS02535 SM00322 K homology RNA-binding domain CLA_RS02605 SM00382 ATPases associated with a variety of cellular activities CLA_RS02620 SM00957 SecA DEAD-like domain CLA_RS02620 SM00958 SecA preprotein cross-linking domain CLA_RS02625 SM00382 ATPases associated with a variety of cellular activities CLA_RS02625 SM00448 cheY-homologous receiver domain CLA_RS02630 SM00859 Semialdehyde dehydrogenase, NAD binding domain CLA_RS02655 SM00028 Tetratricopeptide repeats CLA_RS02705 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CLA_RS02715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS02715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CLA_RS02720 SM00798 AICARFT/IMPCHase bienzyme CLA_RS02720 SM00851 MGS-like domain CLA_RS02725 SM00271 DnaJ molecular chaperone homology domain CLA_RS02740 SM01245 CLA_RS02740 CLA_RS02750 SM01234 CLA_RS02750 CLA_RS02810 SM00318 Staphylococcal nuclease homologues CLA_RS02850 SM00382 ATPases associated with a variety of cellular activities CLA_RS02930 SM00878 Biotin carboxylase C-terminal domain CLA_RS02945 SM00271 DnaJ molecular chaperone homology domain CLA_RS02955 SM00062 Bacterial periplasmic substrate-binding proteins CLA_RS02970 SM00387 Histidine kinase-like ATPases CLA_RS02970 SM00388 His Kinase A (phosphoacceptor) domain CLA_RS02985 SM00382 ATPases associated with a variety of cellular activities CLA_RS03040 SM00363 S4 RNA-binding domain CLA_RS03045 SM00060 Fibronectin type 3 domain CLA_RS03055 SM00382 ATPases associated with a variety of cellular activities CLA_RS03075 SM01409 CLA_RS03075 CLA_RS03080 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLA_RS03080 SM00954 Region found in RelA / SpoT proteins CLA_RS03085 SM00363 S4 RNA-binding domain CLA_RS03095 SM00646 CLA_RS03095 CLA_RS03110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLA_RS03125 SM01130 CLA_RS03125 CLA_RS03140 SM00382 ATPases associated with a variety of cellular activities CLA_RS03145 SM00840 CLA_RS03145 CLA_RS03160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLA_RS03215 SM00382 ATPases associated with a variety of cellular activities CLA_RS03215 SM00930 CLA_RS03215 CLA_RS03255 SM00267 diguanylate cyclase CLA_RS03255 SM00448 cheY-homologous receiver domain CLA_RS03265 SM00257 Lysin motif CLA_RS03325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CLA_RS03330 SM00729 Elongator protein 3, MiaB family, Radical SAM CLA_RS03360 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CLA_RS03360 SM00292 breast cancer carboxy-terminal domain CLA_RS03360 SM00532 Ligase N family CLA_RS03370 SM00904 Riboflavin kinase CLA_RS03415 SM00138 Methyltransferase, chemotaxis proteins CLA_RS03435 SM00487 DEAD-like helicases superfamily CLA_RS03435 SM00490 helicase superfamily c-terminal domain CLA_RS03440 SM00100 Cyclic nucleotide-monophosphate binding domain CLA_RS03455 SM00382 ATPases associated with a variety of cellular activities CLA_RS03460 SM00062 Bacterial periplasmic substrate-binding proteins CLA_RS03485 SM00729 Elongator protein 3, MiaB family, Radical SAM CLA_RS03490 SM00382 ATPases associated with a variety of cellular activities CLA_RS03495 SM00852 Probable molybdopterin binding domain CLA_RS03500 SM00450 Rhodanese Homology Domain CLA_RS03505 SM00450 Rhodanese Homology Domain CLA_RS03510 SM00387 Histidine kinase-like ATPases CLA_RS03520 SM00563 Phosphate acyltransferases CLA_RS03530 SM01211 CLA_RS03530 CLA_RS03545 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLA_RS03545 SM00245 tail specific protease CLA_RS03550 SM00382 ATPases associated with a variety of cellular activities CLA_RS03550 SM01086 C-terminal, D2-small domain, of ClpB protein CLA_RS03625 SM00867 YceI-like domain CLA_RS03680 SM00852 Probable molybdopterin binding domain CLA_RS03750 SM00382 ATPases associated with a variety of cellular activities CLA_RS03760 SM00363 S4 RNA-binding domain CLA_RS03780 SM00382 ATPases associated with a variety of cellular activities CLA_RS03780 SM01086 C-terminal, D2-small domain, of ClpB protein CLA_RS03880 SM00422 helix_turn_helix, mercury resistance CLA_RS03885 SM00271 DnaJ molecular chaperone homology domain CLA_RS03890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CLA_RS03895 SM00448 cheY-homologous receiver domain CLA_RS03895 SM00862 Transcriptional regulatory protein, C terminal CLA_RS03900 SM00387 Histidine kinase-like ATPases CLA_RS03900 SM00388 His Kinase A (phosphoacceptor) domain CLA_RS03915 SM00419 helix_turn_helix, cAMP Regulatory protein CLA_RS03985 SM00382 ATPases associated with a variety of cellular activities CLA_RS04005 SM00448 cheY-homologous receiver domain CLA_RS04005 SM00862 Transcriptional regulatory protein, C terminal CLA_RS04010 SM00387 Histidine kinase-like ATPases CLA_RS04010 SM00388 His Kinase A (phosphoacceptor) domain CLA_RS04030 SM00450 Rhodanese Homology Domain CLA_RS04100 SM00843 CLA_RS04100 CLA_RS04330 SM00507 HNH nucleases CLA_RS04370 SM00382 ATPases associated with a variety of cellular activities CLA_RS04450 SM00481 DNA polymerase alpha chain like domain CLA_RS04480 SM00849 Metallo-beta-lactamase superfamily CLA_RS04505 SM00062 Bacterial periplasmic substrate-binding proteins CLA_RS04505 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CLA_RS04560 SM00478 endonuclease III CLA_RS04560 SM00525 CLA_RS04560 CLA_RS04575 SM00382 ATPases associated with a variety of cellular activities CLA_RS04590 SM00563 Phosphate acyltransferases CLA_RS04625 SM00450 Rhodanese Homology Domain CLA_RS04655 SM00477 DNA/RNA non-specific endonuclease CLA_RS04655 SM00892 DNA/RNA non-specific endonuclease CLA_RS04700 SM01387 CLA_RS04700 CLA_RS04710 SM00732 Likely ribonuclease with RNase H fold. CLA_RS04730 SM00955 CLA_RS04730 CLA_RS04790 SM00382 ATPases associated with a variety of cellular activities CLA_RS04790 SM00464 Found in ATP-dependent protease La (LON) CLA_RS04795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS04815 SM00881 CoA binding domain CLA_RS04845 SM00248 ankyrin repeats CLA_RS04970 SM00382 ATPases associated with a variety of cellular activities CLA_RS04970 SM00962 SRP54-type protein, GTPase domain CLA_RS04970 SM00963 SRP54-type protein, helical bundle domain CLA_RS05005 SM01001 AIR carboxylase CLA_RS05020 SM01230 CLA_RS05020 CLA_RS05075 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CLA_RS05115 SM00479 CLA_RS05115 CLA_RS05140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS05155 SM00883 Chaperonin 10 Kd subunit CLA_RS05170 SM00478 endonuclease III CLA_RS05175 SM00487 DEAD-like helicases superfamily CLA_RS05175 SM00490 helicase superfamily c-terminal domain CLA_RS05175 SM00982 CLA_RS05175 CLA_RS05175 SM01058 CarD-like/TRCF domain CLA_RS05225 SM01323 CLA_RS05225 CLA_RS05295 SM00382 ATPases associated with a variety of cellular activities CLA_RS05295 SM01086 C-terminal, D2-small domain, of ClpB protein CLA_RS05340 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLA_RS05420 SM00836 DALR anticodon binding domain CLA_RS05420 SM01016 Arginyl tRNA synthetase N terminal dom CLA_RS05430 SM00072 Guanylate kinase homologues. CLA_RS05445 SM00382 ATPases associated with a variety of cellular activities CLA_RS05475 SM01228 CLA_RS05475 CLA_RS05495 SM00387 Histidine kinase-like ATPases CLA_RS05495 SM00388 His Kinase A (phosphoacceptor) domain CLA_RS05500 SM00448 cheY-homologous receiver domain CLA_RS05500 SM00862 Transcriptional regulatory protein, C terminal CLA_RS05550 SM00382 ATPases associated with a variety of cellular activities CLA_RS05555 SM00382 ATPases associated with a variety of cellular activities CLA_RS05570 SM00838 Elongation factor G C-terminus CLA_RS05605 SM00226 Low molecular weight phosphatase family CLA_RS05625 SM01004 Delta-aminolevulinic acid dehydratase CLA_RS05635 SM00729 Elongator protein 3, MiaB family, Radical SAM CLA_RS05650 SM01005 Alanine racemase, C-terminal domain CLA_RS05690 SM00434 DNA Topoisomerase IV CLA_RS05715 SM00876 Biotin and Thiamin Synthesis associated domain CLA_RS05755 SM00463 Small MutS-related domain CLA_RS05755 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CLA_RS05755 SM00534 ATPase domain of DNA mismatch repair MUTS family CLA_RS05780 SM00116 Domain in cystathionine beta-synthase and other proteins. CLA_RS05780 SM01240 CLA_RS05780 CLA_RS05810 SM00382 ATPases associated with a variety of cellular activities CLA_RS05865 SM01007 Class II Aldolase and Adducin N-terminal domain CLA_RS05875 SM00842 Cell division protein FtsA CLA_RS05880 SM00864 Tubulin/FtsZ family, GTPase domain CLA_RS05880 SM00865 Tubulin/FtsZ family, C-terminal domain CLA_RS05895 SM00487 DEAD-like helicases superfamily CLA_RS05895 SM00490 helicase superfamily c-terminal domain CLA_RS05915 SM00487 DEAD-like helicases superfamily CLA_RS05915 SM00490 helicase superfamily c-terminal domain CLA_RS05920 SM00841 Elongation factor P, C-terminal CLA_RS05920 SM01185 CLA_RS05920 CLA_RS05950 SM00873 B3/4 domain CLA_RS05950 SM00874 tRNA synthetase B5 domain CLA_RS05950 SM00896 Ferredoxin-fold anticodon binding domain CLA_RS06005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CLA_RS06005 SM00091 PAS domain CLA_RS06005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS06020 SM00845 GatB domain CLA_RS06035 SM00382 ATPases associated with a variety of cellular activities CLA_RS06040 SM00382 ATPases associated with a variety of cellular activities CLA_RS06040 SM00962 SRP54-type protein, GTPase domain CLA_RS06055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CLA_RS06090 SM00924 MgtE intracellular N domain CLA_RS06100 SM00382 ATPases associated with a variety of cellular activities CLA_RS06110 SM00411 bacterial (prokaryotic) histone like domain CLA_RS06140 SM00116 Domain in cystathionine beta-synthase and other proteins. CLA_RS06240 SM00382 ATPases associated with a variety of cellular activities CLA_RS06285 SM00448 cheY-homologous receiver domain CLA_RS06295 SM00382 ATPases associated with a variety of cellular activities CLA_RS06340 SM01400 CLA_RS06340 CLA_RS06355 SM00382 ATPases associated with a variety of cellular activities CLA_RS06400 SM00382 ATPases associated with a variety of cellular activities CLA_RS06430 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLA_RS06440 SM00919 Malic enzyme, NAD binding domain CLA_RS06440 SM01274 CLA_RS06440 CLA_RS06455 SM00878 Biotin carboxylase C-terminal domain CLA_RS06630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS06645 SM00562 CLA_RS06645 CLA_RS06680 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CLA_RS06680 SM00474 3'-5' exonuclease CLA_RS06680 SM00475 5'-3' exonuclease CLA_RS06680 SM00479 CLA_RS06680 CLA_RS06680 SM00482 DNA polymerase A domain CLA_RS06750 SM00861 Transketolase, pyrimidine binding domain CLA_RS06775 SM00830 Chorismate mutase type II CLA_RS06815 SM00260 Two component signalling adaptor domain CLA_RS06820 SM00073 Histidine Phosphotransfer domain CLA_RS06820 SM00260 Two component signalling adaptor domain CLA_RS06820 SM00387 Histidine kinase-like ATPases CLA_RS06820 SM00448 cheY-homologous receiver domain CLA_RS06820 SM01231 CLA_RS06820 CLA_RS06825 SM00260 Two component signalling adaptor domain CLA_RS06825 SM00448 cheY-homologous receiver domain CLA_RS06915 SM00671 Sel1-like repeats. CLA_RS06950 SM00851 MGS-like domain CLA_RS06950 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLA_RS06965 SM00382 ATPases associated with a variety of cellular activities CLA_RS06965 SM00994 ClpX C4-type zinc finger CLA_RS06965 SM01086 C-terminal, D2-small domain, of ClpB protein CLA_RS07000 SM00244 prohibitin homologues CLA_RS07065 SM00967 RNA 2'-O ribose methyltransferase substrate binding CLA_RS07105 SM00729 Elongator protein 3, MiaB family, Radical SAM CLA_RS07170 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLA_RS07205 SM00382 ATPases associated with a variety of cellular activities CLA_RS07210 SM00382 ATPases associated with a variety of cellular activities CLA_RS07365 SM00267 diguanylate cyclase CLA_RS07385 SM00382 ATPases associated with a variety of cellular activities CLA_RS07445 SM00358 Double-stranded RNA binding motif CLA_RS07445 SM00535 Ribonuclease III family CLA_RS07460 SM00400 zinc finger CLA_RS07460 SM00493 CLA_RS07460 CLA_RS07470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS07480 SM01359 CLA_RS07480 CLA_RS07480 SM01360 CLA_RS07480 CLA_RS07500 SM00947 Carbonic anhydrase CLA_RS07550 SM01057 Eukaryotic-type carbonic anhydrase CLA_RS07600 SM00382 ATPases associated with a variety of cellular activities CLA_RS07620 SM00382 ATPases associated with a variety of cellular activities CLA_RS07635 SM00912 haemagglutination activity domain CLA_RS07715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS07720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CLA_RS07730 SM00382 ATPases associated with a variety of cellular activities CLA_RS07800 SM00729 Elongator protein 3, MiaB family, Radical SAM CLA_RS07830 SM00382 ATPases associated with a variety of cellular activities CLA_RS07865 SM00382 ATPases associated with a variety of cellular activities CLA_RS07865 SM00760 Bacterial dnaA protein helix-turn-helix domain CLA_RS08005 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CLA_RS08095 SM00387 Histidine kinase-like ATPases CLA_RS08095 SM00388 His Kinase A (phosphoacceptor) domain CLA_RS08140 SM00479 CLA_RS08140