locus-tag class description CLLT_RS00005 PF00308 Bacterial dnaA protein CLLT_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CLLT_RS00005 PF11638 DnaA N-terminal domain CLLT_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CLLT_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CLLT_RS00010 PF02767 DNA polymerase III beta subunit, central domain CLLT_RS00015 PF01751 Toprim domain CLLT_RS00015 PF00204 DNA gyrase B CLLT_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CLLT_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLLT_RS00020 PF00962 Adenosine/AMP deaminase CLLT_RS00030 PF14489 QueF-like protein CLLT_RS00050 PF08274 PhnA Zinc-Ribbon CLLT_RS00050 PF03831 PhnA domain CLLT_RS00055 PF02511 Thymidylate synthase complementing protein CLLT_RS00060 PF00117 Glutamine amidotransferase class-I CLLT_RS00060 PF06418 CTP synthase N-terminus CLLT_RS00065 PF01368 DHH family CLLT_RS00065 PF17768 RecJ OB domain CLLT_RS00065 PF02272 DHHA1 domain CLLT_RS00070 PF01464 Transglycosylase SLT domain CLLT_RS00075 PF03462 PCRF domain CLLT_RS00075 PF00472 RF-1 domain CLLT_RS00080 PF01649 Ribosomal protein S20 CLLT_RS00090 PF00849 RNA pseudouridylate synthase CLLT_RS00090 PF01479 S4 domain CLLT_RS00095 PF00753 Metallo-beta-lactamase superfamily CLLT_RS00095 PF17770 Ribonuclease J C-terminal domain CLLT_RS00095 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLLT_RS00100 PF00398 Ribosomal RNA adenine dimethylase CLLT_RS00110 PF04055 Radical SAM superfamily CLLT_RS00115 PF04055 Radical SAM superfamily CLLT_RS00115 PF06463 Molybdenum Cofactor Synthesis C CLLT_RS00120 PF00849 RNA pseudouridylate synthase CLLT_RS00125 PF00206 Lyase CLLT_RS00125 PF10397 Adenylosuccinate lyase C-terminus CLLT_RS00130 PF00317 Ribonucleotide reductase, all-alpha domain CLLT_RS00130 PF02867 Ribonucleotide reductase, barrel domain CLLT_RS00130 PF03477 ATP cone domain CLLT_RS00135 PF03169 OPT oligopeptide transporter protein CLLT_RS00140 PF02673 Bacitracin resistance protein BacA CLLT_RS00145 PF03129 Anticodon binding domain CLLT_RS00145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLLT_RS00145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLLT_RS00150 PF00707 Translation initiation factor IF-3, C-terminal domain CLLT_RS00150 PF05198 Translation initiation factor IF-3, N-terminal domain CLLT_RS00160 PF08279 HTH domain CLLT_RS00160 PF13280 WYL domain CLLT_RS00170 PF12592 Protein of unknown function (DUF3763) CLLT_RS00170 PF07728 AAA domain (dynein-related subfamily) CLLT_RS00170 PF17868 AAA lid domain CLLT_RS00175 PF01632 Ribosomal protein L35 CLLT_RS00180 PF00453 Ribosomal protein L20 CLLT_RS00185 PF01068 ATP dependent DNA ligase domain CLLT_RS00185 PF14743 DNA ligase OB-like domain CLLT_RS00190 PF00950 ABC 3 transport family CLLT_RS00195 PF00005 ABC transporter CLLT_RS00205 PF01209 ubiE/COQ5 methyltransferase family CLLT_RS00210 PF04909 Amidohydrolase CLLT_RS00225 PF00884 Sulfatase CLLT_RS00225 PF08019 Phosphoethanolamine transferase EptA/EptB CLLT_RS00230 PF03372 Endonuclease/Exonuclease/phosphatase family CLLT_RS00245 PF03477 ATP cone domain CLLT_RS00245 PF13597 Anaerobic ribonucleoside-triphosphate reductase CLLT_RS00255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CLLT_RS00255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CLLT_RS00260 PF03606 C4-dicarboxylate anaerobic carrier CLLT_RS00265 PF00586 AIR synthase related protein, N-terminal domain CLLT_RS00265 PF02769 AIR synthase related protein, C-terminal domain CLLT_RS00270 PF01121 Dephospho-CoA kinase CLLT_RS00275 PF01678 Diaminopimelate epimerase CLLT_RS00280 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CLLT_RS00295 PF00338 Ribosomal protein S10p/S20e CLLT_RS00300 PF00297 Ribosomal protein L3 CLLT_RS00305 PF00573 Ribosomal protein L4/L1 family CLLT_RS00310 PF00276 Ribosomal protein L23 CLLT_RS00315 PF00181 Ribosomal Proteins L2, RNA binding domain CLLT_RS00315 PF03947 Ribosomal Proteins L2, C-terminal domain CLLT_RS00320 PF00203 Ribosomal protein S19 CLLT_RS00325 PF00237 Ribosomal protein L22p/L17e CLLT_RS00330 PF07650 KH domain CLLT_RS00330 PF00189 Ribosomal protein S3, C-terminal domain CLLT_RS00335 PF00252 Ribosomal protein L16p/L10e CLLT_RS00340 PF00831 Ribosomal L29 protein CLLT_RS00345 PF00366 Ribosomal protein S17 CLLT_RS00350 PF00238 Ribosomal protein L14p/L23e CLLT_RS00355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CLLT_RS00355 PF00467 KOW motif CLLT_RS00360 PF00673 ribosomal L5P family C-terminus CLLT_RS00360 PF00281 Ribosomal protein L5 CLLT_RS00365 PF00253 Ribosomal protein S14p/S29e CLLT_RS00370 PF00410 Ribosomal protein S8 CLLT_RS00375 PF00347 Ribosomal protein L6 CLLT_RS00380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CLLT_RS00385 PF03719 Ribosomal protein S5, C-terminal domain CLLT_RS00385 PF00333 Ribosomal protein S5, N-terminal domain CLLT_RS00390 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CLLT_RS00395 PF00344 SecY translocase CLLT_RS00400 PF01177 Asp/Glu/Hydantoin racemase CLLT_RS00405 PF17763 Glutaminase/Asparaginase C-terminal domain CLLT_RS00405 PF00710 Asparaginase, N-terminal CLLT_RS00410 PF02915 Rubrerythrin CLLT_RS00420 PF01351 Ribonuclease HII CLLT_RS00425 PF03222 Tryptophan/tyrosine permease family CLLT_RS00430 PF03315 Serine dehydratase beta chain CLLT_RS00430 PF03313 Serine dehydratase alpha chain CLLT_RS00435 PF00557 Metallopeptidase family M24 CLLT_RS00440 PF12729 Four helix bundle sensory module for signal transduction CLLT_RS00440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS00440 PF00672 HAMP domain CLLT_RS00445 PF14376 Haem-binding domain CLLT_RS00445 PF03150 Di-haem cytochrome c peroxidase CLLT_RS00445 PF00034 Cytochrome c CLLT_RS00455 PF01176 Translation initiation factor 1A / IF-1 CLLT_RS00460 PF00444 Ribosomal protein L36 CLLT_RS00465 PF00416 Ribosomal protein S13/S18 CLLT_RS00470 PF00411 Ribosomal protein S11 CLLT_RS00475 PF01479 S4 domain CLLT_RS00475 PF00163 Ribosomal protein S4/S9 N-terminal domain CLLT_RS00480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CLLT_RS00480 PF01000 RNA polymerase Rpb3/RpoA insert domain CLLT_RS00480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CLLT_RS00485 PF01196 Ribosomal protein L17 CLLT_RS00490 PF08029 HisG, C-terminal domain CLLT_RS00490 PF01634 ATP phosphoribosyltransferase CLLT_RS00495 PF00815 Histidinol dehydrogenase CLLT_RS00500 PF00475 Imidazoleglycerol-phosphate dehydratase CLLT_RS00500 PF08645 Polynucleotide kinase 3 phosphatase CLLT_RS00510 PF01555 DNA methylase CLLT_RS00515 PF00117 Glutamine amidotransferase class-I CLLT_RS00520 PF00977 Histidine biosynthesis protein CLLT_RS00525 PF00977 Histidine biosynthesis protein CLLT_RS00530 PF01502 Phosphoribosyl-AMP cyclohydrolase CLLT_RS00530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CLLT_RS00535 PF00672 HAMP domain CLLT_RS00535 PF12729 Four helix bundle sensory module for signal transduction CLLT_RS00535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS00545 PF07559 Flagellar basal body protein FlaE CLLT_RS00545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLLT_RS00545 PF00460 Flagella basal body rod protein CLLT_RS00545 PF07196 Flagellin hook IN motif CLLT_RS00555 PF07690 Major Facilitator Superfamily CLLT_RS00560 PF01106 NifU-like domain CLLT_RS00570 PF02875 Mur ligase family, glutamate ligase domain CLLT_RS00570 PF08245 Mur ligase middle domain CLLT_RS00575 PF02575 YbaB/EbfC DNA-binding family CLLT_RS00585 PF00348 Polyprenyl synthetase CLLT_RS00590 PF00456 Transketolase, thiamine diphosphate binding domain CLLT_RS00590 PF02779 Transketolase, pyrimidine binding domain CLLT_RS00590 PF02780 Transketolase, C-terminal domain CLLT_RS00595 PF02405 Permease MlaE CLLT_RS00600 PF00005 ABC transporter CLLT_RS00600 PF09383 NIL domain CLLT_RS00620 PF00080 Copper/zinc superoxide dismutase (SODC) CLLT_RS00640 PF03167 Uracil DNA glycosylase superfamily CLLT_RS00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLLT_RS00650 PF00486 Transcriptional regulatory protein, C terminal CLLT_RS00650 PF00072 Response regulator receiver domain CLLT_RS00665 PF14815 NUDIX domain CLLT_RS00665 PF00730 HhH-GPD superfamily base excision DNA repair protein CLLT_RS00665 PF00633 Helix-hairpin-helix motif CLLT_RS00695 PF02254 TrkA-N domain CLLT_RS00695 PF02080 TrkA-C domain CLLT_RS00700 PF02386 Cation transport protein CLLT_RS00705 PF03605 Anaerobic c4-dicarboxylate membrane transporter CLLT_RS00710 PF00206 Lyase CLLT_RS00710 PF10415 Fumarase C C-terminus CLLT_RS00715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS00715 PF16591 Helical bimodular sensor domain CLLT_RS00715 PF00672 HAMP domain CLLT_RS00720 PF00672 HAMP domain CLLT_RS00720 PF02743 Cache domain CLLT_RS00720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS00730 PF04359 Protein of unknown function (DUF493) CLLT_RS00735 PF01967 MoaC family CLLT_RS00745 PF07690 Major Facilitator Superfamily CLLT_RS00755 PF01152 Bacterial-like globin CLLT_RS00770 PF00113 Enolase, C-terminal TIM barrel domain CLLT_RS00770 PF03952 Enolase, N-terminal domain CLLT_RS00775 PF00154 recA bacterial DNA recombination protein CLLT_RS00785 PF01313 Bacterial export proteins, family 3 CLLT_RS00790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CLLT_RS00800 PF00459 Inositol monophosphatase family CLLT_RS00805 PF00999 Sodium/hydrogen exchanger family CLLT_RS00805 PF02254 TrkA-N domain CLLT_RS00805 PF02080 TrkA-C domain CLLT_RS00810 PF06968 Biotin and Thiamin Synthesis associated domain CLLT_RS00810 PF04055 Radical SAM superfamily CLLT_RS00815 PF01131 DNA topoisomerase CLLT_RS00815 PF01751 Toprim domain CLLT_RS00815 PF01396 Topoisomerase DNA binding C4 zinc finger CLLT_RS00825 PF00700 Bacterial flagellin C-terminal helical region CLLT_RS00825 PF00669 Bacterial flagellin N-terminal helical region CLLT_RS00825 PF07196 Flagellin hook IN motif CLLT_RS00830 PF00669 Bacterial flagellin N-terminal helical region CLLT_RS00830 PF07196 Flagellin hook IN motif CLLT_RS00830 PF00700 Bacterial flagellin C-terminal helical region CLLT_RS00850 PF08666 SAF domain CLLT_RS00850 PF03102 NeuB family CLLT_RS00860 PF04509 CheC-like family CLLT_RS00860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLLT_RS00870 PF02541 Ppx/GppA phosphatase family CLLT_RS00875 PF00037 4Fe-4S binding domain CLLT_RS00880 PF00072 Response regulator receiver domain CLLT_RS00880 PF00486 Transcriptional regulatory protein, C terminal CLLT_RS00890 PF02660 Glycerol-3-phosphate acyltransferase CLLT_RS00895 PF03150 Di-haem cytochrome c peroxidase CLLT_RS00895 PF00034 Cytochrome c CLLT_RS00920 PF00829 Ribosomal prokaryotic L21 protein CLLT_RS00925 PF01016 Ribosomal L27 protein CLLT_RS00930 PF01926 50S ribosome-binding GTPase CLLT_RS00930 PF01018 GTP1/OBG CLLT_RS00935 PF02911 Formyl transferase, C-terminal domain CLLT_RS00935 PF00551 Formyl transferase CLLT_RS00940 PF02237 Biotin protein ligase C terminal domain CLLT_RS00940 PF08279 HTH domain CLLT_RS00940 PF03099 Biotin/lipoate A/B protein ligase family CLLT_RS00945 PF13614 AAA domain CLLT_RS00950 PF02195 ParB-like nuclease domain CLLT_RS00950 PF17762 HTH domain found in ParB protein CLLT_RS00960 PF00430 ATP synthase B/B' CF(0) CLLT_RS00965 PF00213 ATP synthase delta (OSCP) subunit CLLT_RS00970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLLT_RS00970 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLLT_RS00970 PF00306 ATP synthase alpha/beta chain, C terminal domain CLLT_RS00975 PF00231 ATP synthase CLLT_RS00980 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLLT_RS00980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLLT_RS00985 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CLLT_RS00990 PF01618 MotA/TolQ/ExbB proton channel family CLLT_RS00995 PF02472 Biopolymer transport protein ExbD/TolR CLLT_RS01010 PF00691 OmpA family CLLT_RS01025 PF00698 Acyl transferase domain CLLT_RS01030 PF01048 Phosphorylase superfamily CLLT_RS01035 PF01171 PP-loop family CLLT_RS01055 PF01207 Dihydrouridine synthase (Dus) CLLT_RS01070 PF02590 Predicted SPOUT methyltransferase CLLT_RS01075 PF01039 Carboxyl transferase domain CLLT_RS01075 PF17848 Acetyl-coA carboxylase zinc finger domain CLLT_RS01080 PF01103 Surface antigen CLLT_RS01080 PF07244 Surface antigen variable number repeat CLLT_RS01085 PF02153 Prephenate dehydrogenase CLLT_RS01090 PF01551 Peptidase family M23 CLLT_RS01095 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CLLT_RS01105 PF08544 GHMP kinases C terminal CLLT_RS01105 PF00288 GHMP kinases N terminal domain CLLT_RS01115 PF04760 Translation initiation factor IF-2, N-terminal region CLLT_RS01115 PF00009 Elongation factor Tu GTP binding domain CLLT_RS01115 PF03144 Elongation factor Tu domain 2 CLLT_RS01115 PF11987 Translation-initiation factor 2 CLLT_RS01120 PF02033 Ribosome-binding factor A CLLT_RS01125 PF02576 RimP N-terminal domain CLLT_RS01125 PF17384 RimP C-terminal SH3 domain CLLT_RS01145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLLT_RS01145 PF01872 RibD C-terminal domain CLLT_RS01150 PF01343 Peptidase family S49 CLLT_RS01155 PF01979 Amidohydrolase family CLLT_RS01160 PF01220 Dehydroquinase class II CLLT_RS01165 PF01321 Creatinase/Prolidase N-terminal domain CLLT_RS01165 PF00557 Metallopeptidase family M24 CLLT_RS01170 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CLLT_RS01175 PF00448 SRP54-type protein, GTPase domain CLLT_RS01180 PF10609 NUBPL iron-transfer P-loop NTPase CLLT_RS01190 PF04542 Sigma-70 region 2 CLLT_RS01190 PF04545 Sigma-70, region 4 CLLT_RS01190 PF04539 Sigma-70 region 3 CLLT_RS01195 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLLT_RS01195 PF02154 Flagellar motor switch protein FliM CLLT_RS01200 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CLLT_RS01200 PF04509 CheC-like family CLLT_RS01205 PF03641 Possible lysine decarboxylase CLLT_RS01220 PF04608 Phosphatidylglycerophosphatase A CLLT_RS01225 PF14306 PUA-like domain CLLT_RS01225 PF01747 ATP-sulfurylase CLLT_RS01230 PF00072 Response regulator receiver domain CLLT_RS01230 PF00486 Transcriptional regulatory protein, C terminal CLLT_RS01235 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLLT_RS01235 PF02542 YgbB family CLLT_RS01240 PF10609 NUBPL iron-transfer P-loop NTPase CLLT_RS01240 PF01883 Iron-sulfur cluster assembly protein CLLT_RS01245 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CLLT_RS01245 PF14602 Hexapeptide repeat of succinyl-transferase CLLT_RS01250 PF00210 Ferritin-like domain CLLT_RS01255 PF00342 Phosphoglucose isomerase CLLT_RS01260 PF00483 Nucleotidyl transferase CLLT_RS01265 PF01205 Uncharacterized protein family UPF0029 CLLT_RS01265 PF09186 Domain of unknown function (DUF1949) CLLT_RS01280 PF12848 ABC transporter CLLT_RS01280 PF00005 ABC transporter CLLT_RS01290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLLT_RS01290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLLT_RS01290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLLT_RS01290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLLT_RS01295 PF01171 PP-loop family CLLT_RS01300 PF00919 Uncharacterized protein family UPF0004 CLLT_RS01300 PF04055 Radical SAM superfamily CLLT_RS01305 PF03462 PCRF domain CLLT_RS01305 PF00472 RF-1 domain CLLT_RS01315 PF07885 Ion channel CLLT_RS01330 PF03601 Conserved hypothetical protein 698 CLLT_RS01335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLLT_RS01335 PF03466 LysR substrate binding domain CLLT_RS01340 PF08245 Mur ligase middle domain CLLT_RS01345 PF00953 Glycosyl transferase family 4 CLLT_RS01350 PF01676 Metalloenzyme superfamily CLLT_RS01350 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLLT_RS01360 PF01648 4'-phosphopantetheinyl transferase superfamily CLLT_RS01365 PF03748 Flagellar basal body-associated protein FliL CLLT_RS01375 PF06628 Catalase-related immune-responsive CLLT_RS01375 PF00199 Catalase CLLT_RS01380 PF00023 Ankyrin repeat CLLT_RS01380 PF12796 Ankyrin repeats (3 copies) CLLT_RS01385 PF14698 Argininosuccinate lyase C-terminal CLLT_RS01385 PF00206 Lyase CLLT_RS01395 PF01042 Endoribonuclease L-PSP CLLT_RS01400 PF03606 C4-dicarboxylate anaerobic carrier CLLT_RS01405 PF01053 Cys/Met metabolism PLP-dependent enzyme CLLT_RS01410 PF10397 Adenylosuccinate lyase C-terminus CLLT_RS01410 PF00206 Lyase CLLT_RS01415 PF03972 MmgE/PrpD family CLLT_RS01420 PF04023 FeoA domain CLLT_RS01425 PF07670 Nucleoside recognition CLLT_RS01425 PF07664 Ferrous iron transport protein B C terminus CLLT_RS01425 PF02421 Ferrous iron transport protein B CLLT_RS01430 PF03070 TENA/THI-4/PQQC family CLLT_RS01435 PF00550 Phosphopantetheine attachment site CLLT_RS01440 PF02801 Beta-ketoacyl synthase, C-terminal domain CLLT_RS01440 PF00109 Beta-ketoacyl synthase, N-terminal domain CLLT_RS01445 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CLLT_RS01455 PF04305 Protein of unknown function (DUF455) CLLT_RS01465 PF00005 ABC transporter CLLT_RS01475 PF10531 SLBB domain CLLT_RS01475 PF02563 Polysaccharide biosynthesis/export protein CLLT_RS01480 PF01380 SIS domain CLLT_RS01480 PF00571 CBS domain CLLT_RS01490 PF01501 Glycosyl transferase family 8 CLLT_RS01490 PF00535 Glycosyl transferase family 2 CLLT_RS01495 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CLLT_RS01495 PF00535 Glycosyl transferase family 2 CLLT_RS01500 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CLLT_RS01500 PF00535 Glycosyl transferase family 2 CLLT_RS01510 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLLT_RS01515 PF01370 NAD dependent epimerase/dehydratase family CLLT_RS01520 PF16363 GDP-mannose 4,6 dehydratase CLLT_RS01525 PF08544 GHMP kinases C terminal CLLT_RS01525 PF00288 GHMP kinases N terminal domain CLLT_RS01530 PF13580 SIS domain CLLT_RS01535 PF00483 Nucleotidyl transferase CLLT_RS01545 PF00483 Nucleotidyl transferase CLLT_RS01550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLLT_RS01560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLLT_RS01560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLLT_RS01560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLLT_RS01565 PF01370 NAD dependent epimerase/dehydratase family CLLT_RS01575 PF00459 Inositol monophosphatase family CLLT_RS01580 PF01507 Phosphoadenosine phosphosulfate reductase family CLLT_RS01585 PF00009 Elongation factor Tu GTP binding domain CLLT_RS01590 PF03600 Citrate transporter CLLT_RS01590 PF02080 TrkA-C domain CLLT_RS01600 PF00459 Inositol monophosphatase family CLLT_RS01610 PF05159 Capsule polysaccharide biosynthesis protein CLLT_RS01615 PF05159 Capsule polysaccharide biosynthesis protein CLLT_RS01630 PF00067 Cytochrome P450 CLLT_RS01640 PF08529 NusA N-terminal domain CLLT_RS01640 PF13184 NusA-like KH domain CLLT_RS01650 PF00919 Uncharacterized protein family UPF0004 CLLT_RS01650 PF04055 Radical SAM superfamily CLLT_RS01650 PF01938 TRAM domain CLLT_RS01655 PF04028 Domain of unknown function (DUF374) CLLT_RS01680 PF01790 Prolipoprotein diacylglyceryl transferase CLLT_RS01685 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CLLT_RS01690 PF00890 FAD binding domain CLLT_RS01690 PF02910 Fumarate reductase flavoprotein C-term CLLT_RS01695 PF13183 4Fe-4S dicluster domain CLLT_RS01695 PF13085 2Fe-2S iron-sulfur cluster binding domain CLLT_RS01700 PF00350 Dynamin family CLLT_RS01715 PF10615 Protein of unknown function (DUF2470) CLLT_RS01715 PF01243 Pyridoxamine 5'-phosphate oxidase CLLT_RS01720 PF02525 Flavodoxin-like fold CLLT_RS01725 PF01638 HxlR-like helix-turn-helix CLLT_RS01735 PF00107 Zinc-binding dehydrogenase CLLT_RS01735 PF08240 Alcohol dehydrogenase GroES-like domain CLLT_RS01740 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CLLT_RS01740 PF08463 EcoEI R protein C-terminal CLLT_RS01740 PF00271 Helicase conserved C-terminal domain CLLT_RS01740 PF04851 Type III restriction enzyme, res subunit CLLT_RS01750 PF00271 Helicase conserved C-terminal domain CLLT_RS01760 PF13784 Fic/DOC family N-terminal CLLT_RS01760 PF02661 Fic/DOC family CLLT_RS01765 PF02384 N-6 DNA Methylase CLLT_RS01765 PF12161 HsdM N-terminal domain CLLT_RS01770 PF03453 MoeA N-terminal region (domain I and II) CLLT_RS01770 PF00994 Probable molybdopterin binding domain CLLT_RS01770 PF03454 MoeA C-terminal region (domain IV) CLLT_RS01775 PF02391 MoaE protein CLLT_RS01785 PF07731 Multicopper oxidase CLLT_RS01785 PF07732 Multicopper oxidase CLLT_RS01790 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLLT_RS01810 PF01568 Molydopterin dinucleotide binding domain CLLT_RS01810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLLT_RS01810 PF00384 Molybdopterin oxidoreductase CLLT_RS01815 PF00384 Molybdopterin oxidoreductase CLLT_RS01815 PF01568 Molydopterin dinucleotide binding domain CLLT_RS01815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLLT_RS01820 PF13247 4Fe-4S dicluster domain CLLT_RS01825 PF03459 TOBE domain CLLT_RS01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLLT_RS01830 PF01206 Sulfurtransferase TusA CLLT_RS01840 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CLLT_RS01840 PF14850 DNA-binding domain of Proline dehydrogenase CLLT_RS01840 PF00171 Aldehyde dehydrogenase family CLLT_RS01840 PF01619 Proline dehydrogenase CLLT_RS01845 PF00474 Sodium:solute symporter family CLLT_RS01850 PF01206 Sulfurtransferase TusA CLLT_RS01855 PF04143 Sulphur transport CLLT_RS01865 PF00709 Adenylosuccinate synthetase CLLT_RS01885 PF00117 Glutamine amidotransferase class-I CLLT_RS01885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLLT_RS01895 PF00115 Cytochrome C and Quinol oxidase polypeptide I CLLT_RS01910 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CLLT_RS01910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CLLT_RS01940 PF00580 UvrD/REP helicase N-terminal domain CLLT_RS01940 PF13361 UvrD-like helicase C-terminal domain CLLT_RS01940 PF12705 PD-(D/E)XK nuclease superfamily CLLT_RS01945 PF00572 Ribosomal protein L13 CLLT_RS01950 PF00380 Ribosomal protein S9/S16 CLLT_RS01955 PF00691 OmpA family CLLT_RS01955 PF13505 Outer membrane protein beta-barrel domain CLLT_RS01960 PF13419 Haloacid dehalogenase-like hydrolase CLLT_RS01965 PF10371 Domain of unknown function CLLT_RS01965 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLLT_RS01965 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLLT_RS01965 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLLT_RS01965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLLT_RS01975 PF00263 Bacterial type II and III secretion system protein CLLT_RS01975 PF03958 Bacterial type II/III secretion system short domain CLLT_RS01985 PF00437 Type II/IV secretion system protein CLLT_RS01985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLLT_RS01990 PF00482 Type II secretion system (T2SS), protein F CLLT_RS01995 PF01925 Sulfite exporter TauE/SafE CLLT_RS02005 PF07196 Flagellin hook IN motif CLLT_RS02005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLLT_RS02025 PF02119 Flagellar P-ring protein CLLT_RS02050 PF02769 AIR synthase related protein, C-terminal domain CLLT_RS02050 PF00586 AIR synthase related protein, N-terminal domain CLLT_RS02055 PF01142 tRNA pseudouridine synthase D (TruD) CLLT_RS02070 PF00258 Flavodoxin CLLT_RS02095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLLT_RS02095 PF10518 TAT (twin-arginine translocation) pathway signal sequence CLLT_RS02095 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CLLT_RS02100 PF00121 Triosephosphate isomerase CLLT_RS02105 PF00162 Phosphoglycerate kinase CLLT_RS02110 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLLT_RS02110 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLLT_RS02115 PF01467 Cytidylyltransferase-like CLLT_RS02145 PF10415 Fumarase C C-terminus CLLT_RS02145 PF00206 Lyase CLLT_RS02150 PF01380 SIS domain CLLT_RS02160 PF04055 Radical SAM superfamily CLLT_RS02165 PF00860 Permease family CLLT_RS02175 PF01568 Molydopterin dinucleotide binding domain CLLT_RS02175 PF18364 Molybdopterin oxidoreductase N-terminal domain CLLT_RS02175 PF00384 Molybdopterin oxidoreductase CLLT_RS02195 PF05538 Campylobacter major outer membrane protein CLLT_RS02200 PF03883 Peroxide stress protein YaaA CLLT_RS02225 PF00009 Elongation factor Tu GTP binding domain CLLT_RS02225 PF03144 Elongation factor Tu domain 2 CLLT_RS02225 PF03143 Elongation factor Tu C-terminal domain CLLT_RS02230 PF00471 Ribosomal protein L33 CLLT_RS02245 PF02357 Transcription termination factor nusG CLLT_RS02250 PF00298 Ribosomal protein L11, RNA binding domain CLLT_RS02250 PF03946 Ribosomal protein L11, N-terminal domain CLLT_RS02255 PF00687 Ribosomal protein L1p/L10e family CLLT_RS02260 PF00466 Ribosomal protein L10 CLLT_RS02265 PF00542 Ribosomal protein L7/L12 C-terminal domain CLLT_RS02265 PF16320 Ribosomal protein L7/L12 dimerisation domain CLLT_RS02270 PF00562 RNA polymerase Rpb2, domain 6 CLLT_RS02270 PF10385 RNA polymerase beta subunit external 1 domain CLLT_RS02270 PF04565 RNA polymerase Rpb2, domain 3 CLLT_RS02270 PF04561 RNA polymerase Rpb2, domain 2 CLLT_RS02270 PF04560 RNA polymerase Rpb2, domain 7 CLLT_RS02270 PF04563 RNA polymerase beta subunit CLLT_RS02275 PF04983 RNA polymerase Rpb1, domain 3 CLLT_RS02275 PF00623 RNA polymerase Rpb1, domain 2 CLLT_RS02275 PF04997 RNA polymerase Rpb1, domain 1 CLLT_RS02275 PF05000 RNA polymerase Rpb1, domain 4 CLLT_RS02275 PF04998 RNA polymerase Rpb1, domain 5 CLLT_RS02280 PF00164 Ribosomal protein S12/S23 CLLT_RS02285 PF00177 Ribosomal protein S7p/S5e CLLT_RS02290 PF03144 Elongation factor Tu domain 2 CLLT_RS02290 PF00009 Elongation factor Tu GTP binding domain CLLT_RS02290 PF03764 Elongation factor G, domain IV CLLT_RS02290 PF00679 Elongation factor G C-terminus CLLT_RS02290 PF14492 Elongation Factor G, domain II CLLT_RS02295 PF00571 CBS domain CLLT_RS02295 PF01595 Cyclin M transmembrane N-terminal domain CLLT_RS02295 PF03471 Transporter associated domain CLLT_RS02300 PF05992 SbmA/BacA-like family CLLT_RS02305 PF00474 Sodium:solute symporter family CLLT_RS02310 PF16653 Saccharopine dehydrogenase C-terminal domain CLLT_RS02310 PF03435 Saccharopine dehydrogenase NADP binding domain CLLT_RS02315 PF00528 Binding-protein-dependent transport system inner membrane component CLLT_RS02350 PF03544 Gram-negative bacterial TonB protein C-terminal CLLT_RS02355 PF02472 Biopolymer transport protein ExbD/TolR CLLT_RS02360 PF01618 MotA/TolQ/ExbB proton channel family CLLT_RS02365 PF00593 TonB dependent receptor CLLT_RS02365 PF07715 TonB-dependent Receptor Plug Domain CLLT_RS02370 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CLLT_RS02370 PF12170 DNA polymerase III tau subunit V interacting with alpha CLLT_RS02370 PF12169 DNA polymerase III subunits gamma and tau domain III CLLT_RS02375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLLT_RS02375 PF07498 Rho termination factor, N-terminal domain CLLT_RS02375 PF07497 Rho termination factor, RNA-binding domain CLLT_RS02380 PF00403 Heavy-metal-associated domain CLLT_RS02395 PF08645 Polynucleotide kinase 3 phosphatase CLLT_RS02400 PF01370 NAD dependent epimerase/dehydratase family CLLT_RS02405 PF01467 Cytidylyltransferase-like CLLT_RS02405 PF00294 pfkB family carbohydrate kinase CLLT_RS02410 PF13580 SIS domain CLLT_RS02415 PF00224 Pyruvate kinase, barrel domain CLLT_RS02415 PF00391 PEP-utilising enzyme, mobile domain CLLT_RS02415 PF02887 Pyruvate kinase, alpha/beta domain CLLT_RS02420 PF06039 Malate:quinone oxidoreductase (Mqo) CLLT_RS02425 PF03309 Type III pantothenate kinase CLLT_RS02435 PF15437 Plasminogen-binding protein pgbA C-terminal CLLT_RS02445 PF02686 Glu-tRNAGln amidotransferase C subunit CLLT_RS02455 PF01475 Ferric uptake regulator family CLLT_RS02460 PF00152 tRNA synthetases class II (D, K and N) CLLT_RS02460 PF01336 OB-fold nucleic acid binding domain CLLT_RS02465 PF00464 Serine hydroxymethyltransferase CLLT_RS02480 PF08501 Shikimate dehydrogenase substrate binding domain CLLT_RS02485 PF00226 DnaJ domain CLLT_RS02485 PF01556 DnaJ C terminal domain CLLT_RS02485 PF00684 DnaJ central domain CLLT_RS02490 PF00072 Response regulator receiver domain CLLT_RS02490 PF00486 Transcriptional regulatory protein, C terminal CLLT_RS02500 PF13662 Toprim domain CLLT_RS02500 PF02132 RecR protein CLLT_RS02510 PF08459 UvrC Helix-hairpin-helix N-terminal CLLT_RS02510 PF02151 UvrB/uvrC motif CLLT_RS02510 PF01541 GIY-YIG catalytic domain CLLT_RS02520 PF03600 Citrate transporter CLLT_RS02525 PF00958 GMP synthase C terminal domain CLLT_RS02525 PF02540 NAD synthase CLLT_RS02525 PF00117 Glutamine amidotransferase class-I CLLT_RS02530 PF00398 Ribosomal RNA adenine dimethylase CLLT_RS02540 PF02843 Phosphoribosylglycinamide synthetase, C domain CLLT_RS02540 PF02844 Phosphoribosylglycinamide synthetase, N domain CLLT_RS02540 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLLT_RS02550 PF03968 OstA-like protein CLLT_RS02550 PF04453 LPS transport system D CLLT_RS02560 PF00575 S1 RNA binding domain CLLT_RS02560 PF03725 3' exoribonuclease family, domain 2 CLLT_RS02560 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CLLT_RS02560 PF01138 3' exoribonuclease family, domain 1 CLLT_RS02560 PF00013 KH domain CLLT_RS02630 PF02689 Helicase CLLT_RS02630 PF05970 PIF1-like helicase CLLT_RS02640 PF03548 Outer membrane lipoprotein carrier protein LolA CLLT_RS02645 PF07516 SecA Wing and Scaffold domain CLLT_RS02645 PF01043 SecA preprotein cross-linking domain CLLT_RS02645 PF07517 SecA DEAD-like domain CLLT_RS02645 PF02810 SEC-C motif CLLT_RS02650 PF00072 Response regulator receiver domain CLLT_RS02650 PF00158 Sigma-54 interaction domain CLLT_RS02655 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLLT_RS02655 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLLT_RS02665 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLLT_RS02670 PF04055 Radical SAM superfamily CLLT_RS02690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLLT_RS02690 PF02403 Seryl-tRNA synthetase N-terminal domain CLLT_RS02695 PF00579 tRNA synthetases class I (W and Y) CLLT_RS02700 PF01202 Shikimate kinase CLLT_RS02705 PF01926 50S ribosome-binding GTPase CLLT_RS02705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLLT_RS02715 PF00860 Permease family CLLT_RS02720 PF00793 DAHP synthetase I family CLLT_RS02725 PF00885 6,7-dimethyl-8-ribityllumazine synthase CLLT_RS02730 PF01029 NusB family CLLT_RS02735 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLLT_RS02745 PF00672 HAMP domain CLLT_RS02745 PF02743 Cache domain CLLT_RS02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS02750 PF02142 MGS-like domain CLLT_RS02750 PF01808 AICARFT/IMPCHase bienzyme CLLT_RS02755 PF00684 DnaJ central domain CLLT_RS02755 PF01556 DnaJ C terminal domain CLLT_RS02755 PF00226 DnaJ domain CLLT_RS02760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CLLT_RS02760 PF02769 AIR synthase related protein, C-terminal domain CLLT_RS02760 PF00586 AIR synthase related protein, N-terminal domain CLLT_RS02765 PF01926 50S ribosome-binding GTPase CLLT_RS02765 PF10396 GTP-binding protein TrmE N-terminus CLLT_RS02765 PF12631 MnmE helical domain CLLT_RS02775 PF02096 60Kd inner membrane protein CLLT_RS02775 PF14849 YidC periplasmic domain CLLT_RS02780 PF01809 Putative membrane protein insertion efficiency factor CLLT_RS02785 PF00825 Ribonuclease P CLLT_RS02790 PF00468 Ribosomal protein L34 CLLT_RS02810 PF03061 Thioesterase superfamily CLLT_RS02815 PF01420 Type I restriction modification DNA specificity domain CLLT_RS02820 PF02384 N-6 DNA Methylase CLLT_RS02825 PF01323 DSBA-like thioredoxin domain CLLT_RS02830 PF05935 Arylsulfotransferase (ASST) CLLT_RS02830 PF17425 Arylsulfotransferase Ig-like domain CLLT_RS02835 PF03605 Anaerobic c4-dicarboxylate membrane transporter CLLT_RS02840 PF07687 Peptidase dimerisation domain CLLT_RS02840 PF01546 Peptidase family M20/M25/M40 CLLT_RS02845 PF00565 Staphylococcal nuclease homologue CLLT_RS02860 PF08003 Protein of unknown function (DUF1698) CLLT_RS02865 PF00669 Bacterial flagellin N-terminal helical region CLLT_RS02875 PF17827 PrmC N-terminal domain CLLT_RS02875 PF05175 Methyltransferase small domain CLLT_RS02880 PF01435 Peptidase family M48 CLLT_RS02895 PF00149 Calcineurin-like phosphoesterase CLLT_RS02900 PF02666 Phosphatidylserine decarboxylase CLLT_RS02905 PF01312 FlhB HrpN YscU SpaS Family CLLT_RS02930 PF00202 Aminotransferase class-III CLLT_RS02940 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLLT_RS02940 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLLT_RS02945 PF10502 Signal peptidase, peptidase S26 CLLT_RS02950 PF00155 Aminotransferase class I and II CLLT_RS02955 PF01702 Queuine tRNA-ribosyltransferase CLLT_RS02970 PF02785 Biotin carboxylase C-terminal domain CLLT_RS02970 PF00289 Biotin carboxylase, N-terminal domain CLLT_RS02970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLLT_RS02980 PF04377 Arginine-tRNA-protein transferase, C terminus CLLT_RS02980 PF04376 Arginine-tRNA-protein transferase, N terminus CLLT_RS02990 PF01098 Cell cycle protein CLLT_RS02995 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLLT_RS03010 PF00512 His Kinase A (phospho-acceptor) domain CLLT_RS03010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLLT_RS03020 PF00589 Phage integrase family CLLT_RS03020 PF13356 Arm DNA-binding domain CLLT_RS03115 PF13274 Protein of unknown function (DUF4065) CLLT_RS03230 PF09669 Phage regulatory protein Rha (Phage_pRha) CLLT_RS03230 PF10549 ORF11CD3 domain CLLT_RS03300 PF00588 SpoU rRNA Methylase family CLLT_RS03305 PF00005 ABC transporter CLLT_RS03310 PF00528 Binding-protein-dependent transport system inner membrane component CLLT_RS03315 PF01235 Sodium:alanine symporter family CLLT_RS03325 PF02092 Glycyl-tRNA synthetase beta subunit CLLT_RS03330 PF01551 Peptidase family M23 CLLT_RS03340 PF00925 GTP cyclohydrolase II CLLT_RS03340 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CLLT_RS03360 PF01098 Cell cycle protein CLLT_RS03365 PF01479 S4 domain CLLT_RS03365 PF00849 RNA pseudouridylate synthase CLLT_RS03375 PF02390 Putative methyltransferase CLLT_RS03380 PF00005 ABC transporter CLLT_RS03380 PF09383 NIL domain CLLT_RS03395 PF00696 Amino acid kinase family CLLT_RS03400 PF01192 RNA polymerase Rpb6 CLLT_RS03405 PF04607 Region found in RelA / SpoT proteins CLLT_RS03405 PF13291 ACT domain CLLT_RS03405 PF02824 TGS domain CLLT_RS03410 PF00579 tRNA synthetases class I (W and Y) CLLT_RS03420 PF11741 AMIN domain CLLT_RS03420 PF01520 N-acetylmuramoyl-L-alanine amidase CLLT_RS03425 PF01266 FAD dependent oxidoreductase CLLT_RS03425 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CLLT_RS03435 PF17820 PDZ domain CLLT_RS03435 PF02163 Peptidase family M50 CLLT_RS03440 PF01066 CDP-alcohol phosphatidyltransferase CLLT_RS03450 PF00701 Dihydrodipicolinate synthetase family CLLT_RS03455 PF00675 Insulinase (Peptidase family M16) CLLT_RS03455 PF05193 Peptidase M16 inactive domain CLLT_RS03460 PF01180 Dihydroorotate dehydrogenase CLLT_RS03465 PF00664 ABC transporter transmembrane region CLLT_RS03465 PF00005 ABC transporter CLLT_RS03470 PF01406 tRNA synthetases class I (C) catalytic domain CLLT_RS03470 PF09190 DALR domain CLLT_RS03475 PF03023 Lipid II flippase MurJ CLLT_RS03485 PF01330 RuvA N terminal domain CLLT_RS03485 PF07499 RuvA, C-terminal domain CLLT_RS03490 PF01820 D-ala D-ala ligase N-terminus CLLT_RS03490 PF07478 D-ala D-ala ligase C-terminus CLLT_RS03505 PF02875 Mur ligase family, glutamate ligase domain CLLT_RS03505 PF08245 Mur ligase middle domain CLLT_RS03505 PF01225 Mur ligase family, catalytic domain CLLT_RS03510 PF02107 Flagellar L-ring protein CLLT_RS03515 PF01515 Phosphate acetyl/butaryl transferase CLLT_RS03520 PF00871 Acetokinase family CLLT_RS03525 PF03180 NLPA lipoprotein CLLT_RS03535 PF00528 Binding-protein-dependent transport system inner membrane component CLLT_RS03540 PF00005 ABC transporter CLLT_RS03540 PF09383 NIL domain CLLT_RS03545 PF10458 Valyl tRNA synthetase tRNA binding arm CLLT_RS03545 PF00133 tRNA synthetases class I (I, L, M and V) CLLT_RS03545 PF08264 Anticodon-binding domain of tRNA CLLT_RS03555 PF00719 Inorganic pyrophosphatase CLLT_RS03565 PF02938 GAD domain CLLT_RS03565 PF00152 tRNA synthetases class II (D, K and N) CLLT_RS03565 PF01336 OB-fold nucleic acid binding domain CLLT_RS03570 PF01513 ATP-NAD kinase CLLT_RS03575 PF13476 AAA domain CLLT_RS03585 PF01026 TatD related DNase CLLT_RS03590 PF01476 LysM domain CLLT_RS03590 PF01464 Transglycosylase SLT domain CLLT_RS03595 PF03330 Lytic transglycolase CLLT_RS03595 PF05036 Sporulation related domain CLLT_RS03615 PF01926 50S ribosome-binding GTPase CLLT_RS03625 PF00905 Penicillin binding protein transpeptidase domain CLLT_RS03625 PF03717 Penicillin-binding Protein dimerisation domain CLLT_RS03630 PF02547 Queuosine biosynthesis protein CLLT_RS03635 PF00902 Sec-independent protein translocase protein (TatC) CLLT_RS03640 PF02416 mttA/Hcf106 family CLLT_RS03645 PF03773 Predicted permease CLLT_RS03650 PF01022 Bacterial regulatory protein, arsR family CLLT_RS03655 PF04055 Radical SAM superfamily CLLT_RS03655 PF06969 HemN C-terminal domain CLLT_RS03660 PF00293 NUDIX domain CLLT_RS03665 PF00696 Amino acid kinase family CLLT_RS03665 PF13840 ACT domain CLLT_RS03665 PF01842 ACT domain CLLT_RS03680 PF00809 Pterin binding enzyme CLLT_RS03685 PF03120 NAD-dependent DNA ligase OB-fold domain CLLT_RS03685 PF00533 BRCA1 C Terminus (BRCT) domain CLLT_RS03685 PF12826 Helix-hairpin-helix motif CLLT_RS03685 PF01653 NAD-dependent DNA ligase adenylation domain CLLT_RS03690 PF01479 S4 domain CLLT_RS03690 PF01728 FtsJ-like methyltransferase CLLT_RS03700 PF13649 Methyltransferase domain CLLT_RS03705 PF01926 50S ribosome-binding GTPase CLLT_RS03705 PF06071 Protein of unknown function (DUF933) CLLT_RS03710 PF00883 Cytosol aminopeptidase family, catalytic domain CLLT_RS03720 PF00156 Phosphoribosyl transferase domain CLLT_RS03730 PF02502 Ribose/Galactose Isomerase CLLT_RS03735 PF01339 CheB methylesterase CLLT_RS03735 PF00072 Response regulator receiver domain CLLT_RS03740 PF01739 CheR methyltransferase, SAM binding domain CLLT_RS03750 PF04055 Radical SAM superfamily CLLT_RS03755 PF05193 Peptidase M16 inactive domain CLLT_RS03760 PF04851 Type III restriction enzyme, res subunit CLLT_RS03760 PF00271 Helicase conserved C-terminal domain CLLT_RS03765 PF13545 Crp-like helix-turn-helix domain CLLT_RS03765 PF00027 Cyclic nucleotide-binding domain CLLT_RS03775 PF00528 Binding-protein-dependent transport system inner membrane component CLLT_RS03780 PF00005 ABC transporter CLLT_RS03785 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLLT_RS03790 PF08946 Osmosensory transporter coiled coil CLLT_RS03790 PF00083 Sugar (and other) transporter CLLT_RS03800 PF01761 3-dehydroquinate synthase CLLT_RS03810 PF04055 Radical SAM superfamily CLLT_RS03810 PF00919 Uncharacterized protein family UPF0004 CLLT_RS03815 PF17862 AAA+ lid domain CLLT_RS03815 PF00004 ATPase family associated with various cellular activities (AAA) CLLT_RS03815 PF01434 Peptidase family M41 CLLT_RS03820 PF00994 Probable molybdopterin binding domain CLLT_RS03835 PF00183 Hsp90 protein CLLT_RS03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLLT_RS03840 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CLLT_RS03845 PF01553 Acyltransferase CLLT_RS03860 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CLLT_RS03865 PF01259 SAICAR synthetase CLLT_RS03870 PF13180 PDZ domain CLLT_RS03870 PF03572 Peptidase family S41 CLLT_RS03875 PF00004 ATPase family associated with various cellular activities (AAA) CLLT_RS03875 PF07724 AAA domain (Cdc48 subfamily) CLLT_RS03875 PF17871 AAA lid domain CLLT_RS03875 PF02861 Clp amino terminal domain, pathogenicity island component CLLT_RS03875 PF10431 C-terminal, D2-small domain, of ClpB protein CLLT_RS03880 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLLT_RS03880 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CLLT_RS03880 PF10518 TAT (twin-arginine translocation) pathway signal sequence CLLT_RS03885 PF00374 Nickel-dependent hydrogenase CLLT_RS03890 PF01292 Prokaryotic cytochrome b561 CLLT_RS03895 PF01750 Hydrogenase maturation protease CLLT_RS03905 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLLT_RS03930 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CLLT_RS03940 PF00133 tRNA synthetases class I (I, L, M and V) CLLT_RS03940 PF09334 tRNA synthetases class I (M) CLLT_RS03940 PF01588 Putative tRNA binding domain CLLT_RS03955 PF04264 YceI-like domain CLLT_RS03960 PF06508 Queuosine biosynthesis protein QueC CLLT_RS03965 PF02130 Uncharacterized protein family UPF0054 CLLT_RS03995 PF01177 Asp/Glu/Hydantoin racemase CLLT_RS04000 PF18644 Phage integrase SAM-like domain CLLT_RS04000 PF00589 Phage integrase family CLLT_RS04005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLLT_RS04010 PF03454 MoeA C-terminal region (domain IV) CLLT_RS04010 PF00994 Probable molybdopterin binding domain CLLT_RS04010 PF03453 MoeA N-terminal region (domain I and II) CLLT_RS04035 PF02441 Flavoprotein CLLT_RS04040 PF01467 Cytidylyltransferase-like CLLT_RS04045 PF02223 Thymidylate kinase CLLT_RS04050 PF13393 Histidyl-tRNA synthetase CLLT_RS04050 PF03129 Anticodon binding domain CLLT_RS04055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLLT_RS04055 PF17810 Arginine decarboxylase helical bundle domain CLLT_RS04055 PF17944 Arginine decarboxylase C-terminal helical extension CLLT_RS04060 PF00132 Bacterial transferase hexapeptide (six repeats) CLLT_RS04065 PF04101 Glycosyltransferase family 28 C-terminal domain CLLT_RS04065 PF03033 Glycosyltransferase family 28 N-terminal domain CLLT_RS04070 PF01168 Alanine racemase, N-terminal domain CLLT_RS04075 PF00309 Sigma-54 factor, Activator interacting domain (AID) CLLT_RS04075 PF04963 Sigma-54 factor, core binding domain CLLT_RS04075 PF04552 Sigma-54, DNA binding domain CLLT_RS04080 PF00005 ABC transporter CLLT_RS04085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CLLT_RS04090 PF01479 S4 domain CLLT_RS04095 PF00764 Arginosuccinate synthase CLLT_RS04100 PF03948 Ribosomal protein L9, C-terminal domain CLLT_RS04100 PF01281 Ribosomal protein L9, N-terminal domain CLLT_RS04105 PF00227 Proteasome subunit CLLT_RS04110 PF07724 AAA domain (Cdc48 subfamily) CLLT_RS04110 PF10431 C-terminal, D2-small domain, of ClpB protein CLLT_RS04115 PF07650 KH domain CLLT_RS04115 PF01926 50S ribosome-binding GTPase CLLT_RS04140 PF02561 Flagellar protein FliS CLLT_RS04145 PF02465 Flagellar hook-associated protein 2 N-terminus CLLT_RS04145 PF07196 Flagellin hook IN motif CLLT_RS04145 PF07195 Flagellar hook-associated protein 2 C-terminus CLLT_RS04155 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLLT_RS04160 PF03900 Porphobilinogen deaminase, C-terminal domain CLLT_RS04160 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CLLT_RS04170 PF04073 Aminoacyl-tRNA editing domain CLLT_RS04170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLLT_RS04170 PF03129 Anticodon binding domain CLLT_RS04175 PF01488 Shikimate / quinate 5-dehydrogenase CLLT_RS04175 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLLT_RS04175 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CLLT_RS04180 PF00348 Polyprenyl synthetase CLLT_RS04195 PF13419 Haloacid dehalogenase-like hydrolase CLLT_RS04205 PF02254 TrkA-N domain CLLT_RS04205 PF00999 Sodium/hydrogen exchanger family CLLT_RS04210 PF13411 MerR HTH family regulatory protein CLLT_RS04215 PF01556 DnaJ C terminal domain CLLT_RS04215 PF00226 DnaJ domain CLLT_RS04220 PF00595 PDZ domain CLLT_RS04225 PF00486 Transcriptional regulatory protein, C terminal CLLT_RS04225 PF00072 Response regulator receiver domain CLLT_RS04235 PF00580 UvrD/REP helicase N-terminal domain CLLT_RS04235 PF13361 UvrD-like helicase C-terminal domain CLLT_RS04240 PF08534 Redoxin CLLT_RS04245 PF13545 Crp-like helix-turn-helix domain CLLT_RS04245 PF00027 Cyclic nucleotide-binding domain CLLT_RS04255 PF01625 Peptide methionine sulfoxide reductase CLLT_RS04260 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CLLT_RS04265 PF00586 AIR synthase related protein, N-terminal domain CLLT_RS04265 PF02769 AIR synthase related protein, C-terminal domain CLLT_RS04270 PF01924 Hydrogenase formation hypA family CLLT_RS04275 PF01455 HupF/HypC family CLLT_RS04280 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLLT_RS04285 PF17788 HypF Kae1-like domain CLLT_RS04285 PF07503 HypF finger CLLT_RS04285 PF00708 Acylphosphatase CLLT_RS04285 PF01300 Telomere recombination CLLT_RS04300 PF01554 MatE CLLT_RS04310 PF00005 ABC transporter CLLT_RS04315 PF00528 Binding-protein-dependent transport system inner membrane component CLLT_RS04320 PF00528 Binding-protein-dependent transport system inner membrane component CLLT_RS04325 PF12849 PBP superfamily domain CLLT_RS04330 PF00486 Transcriptional regulatory protein, C terminal CLLT_RS04330 PF00072 Response regulator receiver domain CLLT_RS04335 PF07689 KaiB domain CLLT_RS04335 PF00512 His Kinase A (phospho-acceptor) domain CLLT_RS04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLLT_RS04340 PF00210 Ferritin-like domain CLLT_RS04365 PF05140 ResB-like family CLLT_RS04365 PF01578 Cytochrome C assembly protein CLLT_RS04375 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CLLT_RS04375 PF00132 Bacterial transferase hexapeptide (six repeats) CLLT_RS04380 PF10369 Small subunit of acetolactate synthase CLLT_RS04385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLLT_RS04385 PF00205 Thiamine pyrophosphate enzyme, central domain CLLT_RS04385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLLT_RS04395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLLT_RS04400 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLLT_RS04400 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLLT_RS04400 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLLT_RS04410 PF00056 lactate/malate dehydrogenase, NAD binding domain CLLT_RS04410 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLLT_RS04425 PF09397 Ftsk gamma domain CLLT_RS04425 PF17854 FtsK alpha domain CLLT_RS04425 PF01580 FtsK/SpoIIIE family CLLT_RS04430 PF00700 Bacterial flagellin C-terminal helical region CLLT_RS04430 PF00669 Bacterial flagellin N-terminal helical region CLLT_RS04480 PF17758 Proteasomal ATPase OB N-terminal domain CLLT_RS04480 PF16450 Proteasomal ATPase OB C-terminal domain CLLT_RS04480 PF00004 ATPase family associated with various cellular activities (AAA) CLLT_RS04490 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLLT_RS04490 PF14579 Helix-hairpin-helix motif CLLT_RS04490 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLLT_RS04490 PF02811 PHP domain CLLT_RS04500 PF01965 DJ-1/PfpI family CLLT_RS04505 PF00795 Carbon-nitrogen hydrolase CLLT_RS04510 PF01545 Cation efflux family CLLT_RS04510 PF16916 Dimerisation domain of Zinc Transporter CLLT_RS04515 PF04371 Porphyromonas-type peptidyl-arginine deiminase CLLT_RS04525 PF00753 Metallo-beta-lactamase superfamily CLLT_RS04530 PF02540 NAD synthase CLLT_RS04535 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CLLT_RS04540 PF00291 Pyridoxal-phosphate dependent enzyme CLLT_RS04545 PF02348 Cytidylyltransferase CLLT_RS04550 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLLT_RS04555 PF00528 Binding-protein-dependent transport system inner membrane component CLLT_RS04560 PF11412 Disulphide bond corrector protein DsbC CLLT_RS04560 PF02683 Cytochrome C biogenesis protein transmembrane region CLLT_RS04560 PF00085 Thioredoxin CLLT_RS04565 PF03473 MOSC domain CLLT_RS04570 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLLT_RS04575 PF00209 Sodium:neurotransmitter symporter family CLLT_RS04585 PF00691 OmpA family CLLT_RS04585 PF01389 OmpA-like transmembrane domain CLLT_RS04595 PF01116 Fructose-bisphosphate aldolase class-II CLLT_RS04605 PF00633 Helix-hairpin-helix motif CLLT_RS04605 PF00730 HhH-GPD superfamily base excision DNA repair protein CLLT_RS04605 PF10576 Iron-sulfur binding domain of endonuclease III CLLT_RS04610 PF03616 Sodium/glutamate symporter CLLT_RS04620 PF00005 ABC transporter CLLT_RS04620 PF02687 FtsX-like permease family CLLT_RS04620 PF12704 MacB-like periplasmic core domain CLLT_RS04625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLLT_RS04630 PF00881 Nitroreductase family CLLT_RS04635 PF00501 AMP-binding enzyme CLLT_RS04635 PF01553 Acyltransferase CLLT_RS04640 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLLT_RS04645 PF05175 Methyltransferase small domain CLLT_RS04645 PF08468 Methyltransferase small domain N-terminal CLLT_RS04660 PF00218 Indole-3-glycerol phosphate synthase CLLT_RS04675 PF01384 Phosphate transporter family CLLT_RS04680 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLLT_RS04685 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CLLT_RS04705 PF00012 Hsp70 protein CLLT_RS04710 PF01025 GrpE CLLT_RS04735 PF00771 FHIPEP family CLLT_RS04740 PF02082 Transcriptional regulator CLLT_RS04745 PF00312 Ribosomal protein S15 CLLT_RS04750 PF01189 16S rRNA methyltransferase RsmB/F CLLT_RS04750 PF01029 NusB family CLLT_RS04755 PF03652 Holliday junction resolvase CLLT_RS04760 PF02481 DNA recombination-mediator protein A CLLT_RS04770 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLLT_RS04770 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CLLT_RS04775 PF00773 RNB domain CLLT_RS04785 PF01250 Ribosomal protein S6 CLLT_RS04790 PF00436 Single-strand binding protein family CLLT_RS04795 PF01084 Ribosomal protein S18 CLLT_RS04800 PF01914 MarC family integral membrane protein CLLT_RS04820 PF03807 NADP oxidoreductase coenzyme F420-dependent CLLT_RS04820 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLLT_RS04825 PF02623 FliW protein CLLT_RS04835 PF00004 ATPase family associated with various cellular activities (AAA) CLLT_RS04835 PF02190 ATP-dependent protease La (LON) substrate-binding domain CLLT_RS04835 PF05362 Lon protease (S16) C-terminal proteolytic domain CLLT_RS04840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS04840 PF08447 PAS fold CLLT_RS04840 PF13426 PAS domain CLLT_RS04855 PF13291 ACT domain CLLT_RS04855 PF00291 Pyridoxal-phosphate dependent enzyme CLLT_RS04865 PF07690 Major Facilitator Superfamily CLLT_RS04875 PF05958 tRNA (Uracil-5-)-methyltransferase CLLT_RS04880 PF03553 Na+/H+ antiporter family CLLT_RS04885 PF00106 short chain dehydrogenase CLLT_RS04890 PF12796 Ankyrin repeats (3 copies) CLLT_RS04895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLLT_RS04895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLLT_RS04900 PF00892 EamA-like transporter family CLLT_RS04905 PF01416 tRNA pseudouridine synthase CLLT_RS04915 PF06750 Bacterial Peptidase A24 N-terminal domain CLLT_RS04915 PF01478 Type IV leader peptidase family CLLT_RS04920 PF01255 Putative undecaprenyl diphosphate synthase CLLT_RS04930 PF04127 DNA / pantothenate metabolism flavoprotein CLLT_RS04930 PF02441 Flavoprotein CLLT_RS04935 PF12804 MobA-like NTP transferase domain CLLT_RS04935 PF14602 Hexapeptide repeat of succinyl-transferase CLLT_RS04940 PF00813 FliP family CLLT_RS04950 PF00425 chorismate binding enzyme CLLT_RS04950 PF04715 Anthranilate synthase component I, N terminal region CLLT_RS04955 PF00117 Glutamine amidotransferase class-I CLLT_RS04970 PF00873 AcrB/AcrD/AcrF family CLLT_RS04980 PF03960 ArsC family CLLT_RS04985 PF01474 Class-II DAHP synthetase family CLLT_RS04995 PF01245 Ribosomal protein L19 CLLT_RS05000 PF01746 tRNA (Guanine-1)-methyltransferase CLLT_RS05005 PF05239 PRC-barrel domain CLLT_RS05005 PF01782 RimM N-terminal domain CLLT_RS05015 PF00886 Ribosomal protein S16 CLLT_RS05020 PF00448 SRP54-type protein, GTPase domain CLLT_RS05020 PF02978 Signal peptide binding domain CLLT_RS05020 PF02881 SRP54-type protein, helical bundle domain CLLT_RS05025 PF00849 RNA pseudouridylate synthase CLLT_RS05030 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CLLT_RS05040 PF01784 NIF3 (NGG1p interacting factor 3) CLLT_RS05045 PF02091 Glycyl-tRNA synthetase alpha subunit CLLT_RS05055 PF00731 AIR carboxylase CLLT_RS05070 PF03951 Glutamine synthetase, beta-Grasp domain CLLT_RS05070 PF00120 Glutamine synthetase, catalytic domain CLLT_RS05075 PF00551 Formyl transferase CLLT_RS05075 PF01842 ACT domain CLLT_RS05095 PF07690 Major Facilitator Superfamily CLLT_RS05115 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CLLT_RS05120 PF12801 4Fe-4S binding domain CLLT_RS05120 PF00037 4Fe-4S binding domain CLLT_RS05125 PF12838 4Fe-4S dicluster domain CLLT_RS05125 PF12800 4Fe-4S binding domain CLLT_RS05130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLLT_RS05130 PF00384 Molybdopterin oxidoreductase CLLT_RS05130 PF01568 Molydopterin dinucleotide binding domain CLLT_RS05135 PF00460 Flagella basal body rod protein CLLT_RS05135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLLT_RS05140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLLT_RS05140 PF00460 Flagella basal body rod protein CLLT_RS05145 PF04539 Sigma-70 region 3 CLLT_RS05145 PF04542 Sigma-70 region 2 CLLT_RS05145 PF04545 Sigma-70, region 4 CLLT_RS05145 PF00140 Sigma-70 factor, region 1.2 CLLT_RS05150 PF17941 Polyphosphate kinase C-terminal domain 1 CLLT_RS05150 PF13089 Polyphosphate kinase N-terminal domain CLLT_RS05150 PF13090 Polyphosphate kinase C-terminal domain 2 CLLT_RS05150 PF02503 Polyphosphate kinase middle domain CLLT_RS05160 PF02335 Cytochrome c552 CLLT_RS05165 PF01964 Radical SAM ThiC family CLLT_RS05170 PF14480 DNA polymerase III polC-type N-terminus I CLLT_RS05170 PF00929 Exonuclease CLLT_RS05170 PF14579 Helix-hairpin-helix motif CLLT_RS05170 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLLT_RS05170 PF02811 PHP domain CLLT_RS05170 PF11490 DNA polymerase III polC-type N-terminus II CLLT_RS05170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLLT_RS05175 PF00834 Ribulose-phosphate 3 epimerase family CLLT_RS05180 PF00830 Ribosomal L28 family CLLT_RS05195 PF16591 Helical bimodular sensor domain CLLT_RS05195 PF00672 HAMP domain CLLT_RS05195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS05205 PF00118 TCP-1/cpn60 chaperonin family CLLT_RS05210 PF00166 Chaperonin 10 Kd subunit CLLT_RS05220 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CLLT_RS05220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLLT_RS05230 PF03461 TRCF domain CLLT_RS05230 PF17757 UvrB interaction domain CLLT_RS05230 PF00271 Helicase conserved C-terminal domain CLLT_RS05230 PF02559 CarD-like/TRCF domain CLLT_RS05230 PF00270 DEAD/DEAH box helicase CLLT_RS05240 PF04225 Opacity-associated protein A LysM-like domain CLLT_RS05240 PF01551 Peptidase family M23 CLLT_RS05245 PF08245 Mur ligase middle domain CLLT_RS05260 PF13603 Leucyl-tRNA synthetase, Domain 2 CLLT_RS05260 PF00133 tRNA synthetases class I (I, L, M and V) CLLT_RS05260 PF08264 Anticodon-binding domain of tRNA CLLT_RS05260 PF09334 tRNA synthetases class I (M) CLLT_RS05270 PF07549 SecD/SecF GG Motif CLLT_RS05270 PF02355 Protein export membrane protein CLLT_RS05275 PF02355 Protein export membrane protein CLLT_RS05280 PF02699 Preprotein translocase subunit CLLT_RS05290 PF02772 S-adenosylmethionine synthetase, central domain CLLT_RS05290 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLLT_RS05290 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLLT_RS05295 PF00375 Sodium:dicarboxylate symporter family CLLT_RS05300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLLT_RS05300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLLT_RS05305 PF08439 Oligopeptidase F CLLT_RS05305 PF01432 Peptidase family M3 CLLT_RS05315 PF00580 UvrD/REP helicase N-terminal domain CLLT_RS05315 PF13361 UvrD-like helicase C-terminal domain CLLT_RS05320 PF01509 TruB family pseudouridylate synthase (N terminal domain) CLLT_RS05325 PF02599 Global regulator protein family CLLT_RS05330 PF00288 GHMP kinases N terminal domain CLLT_RS05335 PF01668 SmpB protein CLLT_RS05345 PF02617 ATP-dependent Clp protease adaptor protein ClpS CLLT_RS05350 PF10431 C-terminal, D2-small domain, of ClpB protein CLLT_RS05350 PF02861 Clp amino terminal domain, pathogenicity island component CLLT_RS05350 PF07724 AAA domain (Cdc48 subfamily) CLLT_RS05350 PF00004 ATPase family associated with various cellular activities (AAA) CLLT_RS05350 PF17871 AAA lid domain CLLT_RS05355 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CLLT_RS05360 PF00460 Flagella basal body rod protein CLLT_RS05365 PF00460 Flagella basal body rod protein CLLT_RS05365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLLT_RS05370 PF02049 Flagellar hook-basal body complex protein FliE CLLT_RS05380 PF00762 Ferrochelatase CLLT_RS05385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLLT_RS05385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLLT_RS05390 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLLT_RS05395 PF01411 tRNA synthetases class II (A) CLLT_RS05395 PF02272 DHHA1 domain CLLT_RS05395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLLT_RS05400 PF02545 Maf-like protein CLLT_RS05405 PF00912 Transglycosylase CLLT_RS05405 PF17092 Penicillin-binding protein OB-like domain CLLT_RS05405 PF00905 Penicillin binding protein transpeptidase domain CLLT_RS05410 PF00174 Oxidoreductase molybdopterin binding domain CLLT_RS05425 PF00403 Heavy-metal-associated domain CLLT_RS05435 PF00893 Small Multidrug Resistance protein CLLT_RS05440 PF00893 Small Multidrug Resistance protein CLLT_RS05445 PF01709 Transcriptional regulator CLLT_RS05450 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLLT_RS05460 PF09335 SNARE associated Golgi protein CLLT_RS05470 PF12821 Threonine/Serine exporter, ThrE CLLT_RS05470 PF06738 Putative threonine/serine exporter CLLT_RS05475 PF00750 tRNA synthetases class I (R) CLLT_RS05475 PF05746 DALR anticodon binding domain CLLT_RS05475 PF03485 Arginyl tRNA synthetase N terminal domain CLLT_RS05480 PF02416 mttA/Hcf106 family CLLT_RS05485 PF00625 Guanylate kinase CLLT_RS05495 PF01311 Bacterial export proteins, family 1 CLLT_RS05500 PF00005 ABC transporter CLLT_RS05505 PF00889 Elongation factor TS CLLT_RS05510 PF00318 Ribosomal protein S2 CLLT_RS05520 PF00033 Cytochrome b/b6/petB CLLT_RS05520 PF00032 Cytochrome b(C-terminal)/b6/petD CLLT_RS05525 PF00355 Rieske [2Fe-2S] domain CLLT_RS05525 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CLLT_RS05530 PF01134 Glucose inhibited division protein A CLLT_RS05530 PF13932 GidA associated domain CLLT_RS05535 PF00677 Lumazine binding domain CLLT_RS05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLLT_RS05555 PF00486 Transcriptional regulatory protein, C terminal CLLT_RS05555 PF00072 Response regulator receiver domain CLLT_RS05575 PF05538 Campylobacter major outer membrane protein CLLT_RS05585 PF13458 Periplasmic binding protein CLLT_RS05590 PF13458 Periplasmic binding protein CLLT_RS05595 PF02653 Branched-chain amino acid transport system / permease component CLLT_RS05600 PF02653 Branched-chain amino acid transport system / permease component CLLT_RS05600 PF11862 Domain of unknown function (DUF3382) CLLT_RS05605 PF00005 ABC transporter CLLT_RS05605 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLLT_RS05610 PF00005 ABC transporter CLLT_RS05615 PF01578 Cytochrome C assembly protein CLLT_RS05615 PF05140 ResB-like family CLLT_RS05625 PF00679 Elongation factor G C-terminus CLLT_RS05625 PF03144 Elongation factor Tu domain 2 CLLT_RS05625 PF00009 Elongation factor Tu GTP binding domain CLLT_RS05625 PF06421 GTP-binding protein LepA C-terminus CLLT_RS05635 PF01554 MatE CLLT_RS05645 PF02581 Thiamine monophosphate synthase CLLT_RS05650 PF02110 Hydroxyethylthiazole kinase family CLLT_RS05655 PF08543 Phosphomethylpyrimidine kinase CLLT_RS05660 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLLT_RS05670 PF02527 rRNA small subunit methyltransferase G CLLT_RS05675 PF00925 GTP cyclohydrolase II CLLT_RS05680 PF00490 Delta-aminolevulinic acid dehydratase CLLT_RS05685 PF10788 Protein of unknown function (DUF2603) CLLT_RS05690 PF06969 HemN C-terminal domain CLLT_RS05690 PF04055 Radical SAM superfamily CLLT_RS05695 PF02665 Nitrate reductase gamma subunit CLLT_RS05695 PF02754 Cysteine-rich domain CLLT_RS05695 PF13183 4Fe-4S dicluster domain CLLT_RS05705 PF00842 Alanine racemase, C-terminal domain CLLT_RS05705 PF01168 Alanine racemase, N-terminal domain CLLT_RS05725 PF02630 SCO1/SenC CLLT_RS05730 PF12704 MacB-like periplasmic core domain CLLT_RS05730 PF02687 FtsX-like permease family CLLT_RS05745 PF00521 DNA gyrase/topoisomerase IV, subunit A CLLT_RS05745 PF03989 DNA gyrase C-terminal domain, beta-propeller CLLT_RS05760 PF00939 Sodium:sulfate symporter transmembrane region CLLT_RS05765 PF02581 Thiamine monophosphate synthase CLLT_RS05770 PF06968 Biotin and Thiamin Synthesis associated domain CLLT_RS05770 PF04055 Radical SAM superfamily CLLT_RS05775 PF05690 Thiazole biosynthesis protein ThiG CLLT_RS05780 PF00581 Rhodanese-like domain CLLT_RS05780 PF00899 ThiF family CLLT_RS05795 PF01546 Peptidase family M20/M25/M40 CLLT_RS05795 PF07687 Peptidase dimerisation domain CLLT_RS05800 PF01810 LysE type translocator CLLT_RS05805 PF02146 Sir2 family CLLT_RS05810 PF00488 MutS domain V CLLT_RS05810 PF01713 Smr domain CLLT_RS05820 PF08245 Mur ligase middle domain CLLT_RS05820 PF02875 Mur ligase family, glutamate ligase domain CLLT_RS05820 PF01225 Mur ligase family, catalytic domain CLLT_RS05835 PF00571 CBS domain CLLT_RS05835 PF00478 IMP dehydrogenase / GMP reductase domain CLLT_RS05840 PF01425 Amidase CLLT_RS05845 PF00133 tRNA synthetases class I (I, L, M and V) CLLT_RS05845 PF08264 Anticodon-binding domain of tRNA CLLT_RS05850 PF02464 Competence-damaged protein CLLT_RS05850 PF18146 Damage-inducible protein CinA KH domain CLLT_RS05850 PF00994 Probable molybdopterin binding domain CLLT_RS05865 PF12704 MacB-like periplasmic core domain CLLT_RS05865 PF02687 FtsX-like permease family CLLT_RS05865 PF00005 ABC transporter CLLT_RS05885 PF10634 Fe2+ transport protein CLLT_RS05890 PF03239 Iron permease FTR1 family CLLT_RS05905 PF01063 Amino-transferase class IV CLLT_RS05910 PF05686 Glycosyl transferase family 90 CLLT_RS05925 PF01795 MraW methylase family CLLT_RS05940 PF02491 SHS2 domain inserted in FTSA CLLT_RS05945 PF00091 Tubulin/FtsZ family, GTPase domain CLLT_RS05945 PF12327 FtsZ family, C-terminal domain CLLT_RS05950 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLLT_RS05950 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CLLT_RS05955 PF04551 GcpE protein CLLT_RS05960 PF00270 DEAD/DEAH box helicase CLLT_RS05960 PF00271 Helicase conserved C-terminal domain CLLT_RS05960 PF18074 Primosomal protein N C-terminal domain CLLT_RS05960 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CLLT_RS05980 PF02151 UvrB/uvrC motif CLLT_RS05980 PF17757 UvrB interaction domain CLLT_RS05980 PF12344 Ultra-violet resistance protein B CLLT_RS05980 PF04851 Type III restriction enzyme, res subunit CLLT_RS05980 PF00271 Helicase conserved C-terminal domain CLLT_RS05985 PF09285 Elongation factor P, C-terminal CLLT_RS05985 PF08207 Elongation factor P (EF-P) KOW-like domain CLLT_RS05985 PF01132 Elongation factor P (EF-P) OB domain CLLT_RS05990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLLT_RS05990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLLT_RS05990 PF01842 ACT domain CLLT_RS06000 PF00575 S1 RNA binding domain CLLT_RS06005 PF02401 LytB protein CLLT_RS06010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLLT_RS06015 PF03484 tRNA synthetase B5 domain CLLT_RS06015 PF03483 B3/4 domain CLLT_RS06015 PF01588 Putative tRNA binding domain CLLT_RS06015 PF03147 Ferredoxin-fold anticodon binding domain CLLT_RS06015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CLLT_RS06020 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CLLT_RS06020 PF01409 tRNA synthetases class II core domain (F) CLLT_RS06025 PF01230 HIT domain CLLT_RS06030 PF01293 Phosphoenolpyruvate carboxykinase CLLT_RS06035 PF00364 Biotin-requiring enzyme CLLT_RS06035 PF00682 HMGL-like CLLT_RS06035 PF02436 Conserved carboxylase domain CLLT_RS06040 PF00209 Sodium:neurotransmitter symporter family CLLT_RS06045 PF00209 Sodium:neurotransmitter symporter family CLLT_RS06050 PF00209 Sodium:neurotransmitter symporter family CLLT_RS06055 PF00137 ATP synthase subunit C CLLT_RS06070 PF08447 PAS fold CLLT_RS06070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS06070 PF13426 PAS domain CLLT_RS06075 PF01979 Amidohydrolase family CLLT_RS06080 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLLT_RS06080 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLLT_RS06085 PF02934 GatB/GatE catalytic domain CLLT_RS06085 PF02637 GatB domain CLLT_RS06090 PF00119 ATP synthase A chain CLLT_RS06095 PF18073 Rubredoxin metal binding domain CLLT_RS06105 PF00448 SRP54-type protein, GTPase domain CLLT_RS06110 PF00578 AhpC/TSA family CLLT_RS06120 PF12072 Domain of unknown function (DUF3552) CLLT_RS06120 PF01966 HD domain CLLT_RS06135 PF03631 Virulence factor BrkB CLLT_RS06140 PF01565 FAD binding domain CLLT_RS06140 PF02913 FAD linked oxidases, C-terminal domain CLLT_RS06150 PF08525 Opacity-associated protein A N-terminal motif CLLT_RS06150 PF01551 Peptidase family M23 CLLT_RS06150 PF01476 LysM domain CLLT_RS06155 PF01769 Divalent cation transporter CLLT_RS06155 PF00571 CBS domain CLLT_RS06155 PF03448 MgtE intracellular N domain CLLT_RS06160 PF08534 Redoxin CLLT_RS06165 PF00772 DnaB-like helicase N terminal domain CLLT_RS06165 PF03796 DnaB-like helicase C terminal domain CLLT_RS06170 PF00291 Pyridoxal-phosphate dependent enzyme CLLT_RS06175 PF00216 Bacterial DNA-binding protein CLLT_RS06190 PF03062 MBOAT, membrane-bound O-acyltransferase family CLLT_RS06200 PF00535 Glycosyl transferase family 2 CLLT_RS06200 PF01501 Glycosyl transferase family 8 CLLT_RS06205 PF02348 Cytidylyltransferase CLLT_RS06210 PF00483 Nucleotidyl transferase CLLT_RS06215 PF02350 UDP-N-acetylglucosamine 2-epimerase CLLT_RS06220 PF08666 SAF domain CLLT_RS06220 PF03102 NeuB family CLLT_RS06235 PF01370 NAD dependent epimerase/dehydratase family CLLT_RS06250 PF00535 Glycosyl transferase family 2 CLLT_RS06250 PF01501 Glycosyl transferase family 8 CLLT_RS06260 PF00534 Glycosyl transferases group 1 CLLT_RS06265 PF00535 Glycosyl transferase family 2 CLLT_RS06275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLLT_RS06285 PF16363 GDP-mannose 4,6 dehydratase CLLT_RS06290 PF00005 ABC transporter CLLT_RS06290 PF00664 ABC transporter transmembrane region CLLT_RS06295 PF00534 Glycosyl transferases group 1 CLLT_RS06295 PF13439 Glycosyltransferase Family 4 CLLT_RS06300 PF00534 Glycosyl transferases group 1 CLLT_RS06300 PF13439 Glycosyltransferase Family 4 CLLT_RS06305 PF18527 STT3/PglB C-terminal beta-barrel domain CLLT_RS06305 PF02516 Oligosaccharyl transferase STT3 subunit CLLT_RS06310 PF13477 Glycosyl transferase 4-like CLLT_RS06310 PF00534 Glycosyl transferases group 1 CLLT_RS06315 PF02397 Bacterial sugar transferase CLLT_RS06320 PF17836 PglD N-terminal domain CLLT_RS06320 PF00132 Bacterial transferase hexapeptide (six repeats) CLLT_RS06325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLLT_RS06330 PF02719 Polysaccharide biosynthesis protein CLLT_RS06335 PF00072 Response regulator receiver domain CLLT_RS06345 PF01434 Peptidase family M41 CLLT_RS06345 PF00004 ATPase family associated with various cellular activities (AAA) CLLT_RS06345 PF17862 AAA+ lid domain CLLT_RS06355 PF01066 CDP-alcohol phosphatidyltransferase CLLT_RS06370 PF11798 IMS family HHH motif CLLT_RS06370 PF11799 impB/mucB/samB family C-terminal domain CLLT_RS06370 PF00817 impB/mucB/samB family CLLT_RS06385 PF03061 Thioesterase superfamily CLLT_RS06390 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLLT_RS06390 PF14572 Phosphoribosyl synthetase-associated domain CLLT_RS06405 PF05491 RuvB C-terminal winged helix domain CLLT_RS06405 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLLT_RS06405 PF17864 RuvB AAA lid domain CLLT_RS06410 PF01594 AI-2E family transporter CLLT_RS06415 PF07690 Major Facilitator Superfamily CLLT_RS06420 PF01725 Ham1 family CLLT_RS06450 PF12857 TOBE-like domain CLLT_RS06450 PF00005 ABC transporter CLLT_RS06450 PF17850 CysA C-terminal regulatory domain CLLT_RS06460 PF03841 L-seryl-tRNA selenium transferase CLLT_RS06465 PF09107 Elongation factor SelB, winged helix CLLT_RS06465 PF03144 Elongation factor Tu domain 2 CLLT_RS06465 PF09106 Elongation factor SelB, winged helix CLLT_RS06465 PF00009 Elongation factor Tu GTP binding domain CLLT_RS06480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLLT_RS06480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLLT_RS06485 PF02621 Menaquinone biosynthesis CLLT_RS06490 PF03949 Malic enzyme, NAD binding domain CLLT_RS06490 PF00390 Malic enzyme, N-terminal domain CLLT_RS06490 PF01515 Phosphate acetyl/butaryl transferase CLLT_RS06495 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLLT_RS06505 PF02785 Biotin carboxylase C-terminal domain CLLT_RS06505 PF00289 Biotin carboxylase, N-terminal domain CLLT_RS06505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLLT_RS06510 PF00364 Biotin-requiring enzyme CLLT_RS06515 PF00692 dUTPase CLLT_RS06520 PF02719 Polysaccharide biosynthesis protein CLLT_RS06525 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLLT_RS06530 PF09940 Domain of unknown function (DUF2172) CLLT_RS06530 PF16254 Domain of unknown function (DUF4910) CLLT_RS06530 PF16221 winged helix-turn-helix CLLT_RS06540 PF00501 AMP-binding enzyme CLLT_RS06540 PF13193 AMP-binding enzyme C-terminal domain CLLT_RS06540 PF00550 Phosphopantetheine attachment site CLLT_RS06540 PF00668 Condensation domain CLLT_RS06565 PF03601 Conserved hypothetical protein 698 CLLT_RS06580 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLLT_RS06580 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLLT_RS06585 PF00550 Phosphopantetheine attachment site CLLT_RS06600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLLT_RS06600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLLT_RS06615 PF02348 Cytidylyltransferase CLLT_RS06625 PF13302 Acetyltransferase (GNAT) domain CLLT_RS06635 PF08241 Methyltransferase domain CLLT_RS06645 PF01925 Sulfite exporter TauE/SafE CLLT_RS06650 PF01312 FlhB HrpN YscU SpaS Family CLLT_RS06655 PF02743 Cache domain CLLT_RS06655 PF00672 HAMP domain CLLT_RS06655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS06660 PF00578 AhpC/TSA family CLLT_RS06660 PF10417 C-terminal domain of 1-Cys peroxiredoxin CLLT_RS06665 PF00037 4Fe-4S binding domain CLLT_RS06670 PF00334 Nucleoside diphosphate kinase CLLT_RS06680 PF01783 Ribosomal L32p protein family CLLT_RS06685 PF02504 Fatty acid synthesis protein CLLT_RS06690 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLLT_RS06690 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLLT_RS06695 PF00691 OmpA family CLLT_RS06695 PF13677 Membrane MotB of proton-channel complex MotA/MotB CLLT_RS06700 PF01618 MotA/TolQ/ExbB proton channel family CLLT_RS06705 PF01612 3'-5' exonuclease CLLT_RS06705 PF00476 DNA polymerase family A CLLT_RS06705 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLLT_RS06705 PF01367 5'-3' exonuclease, C-terminal SAM fold CLLT_RS06710 PF07690 Major Facilitator Superfamily CLLT_RS06710 PF00083 Sugar (and other) transporter CLLT_RS06715 PF01156 Inosine-uridine preferring nucleoside hydrolase CLLT_RS06725 PF00291 Pyridoxal-phosphate dependent enzyme CLLT_RS06735 PF02600 Disulfide bond formation protein DsbB CLLT_RS06740 PF00005 ABC transporter CLLT_RS06740 PF17760 UvrA interaction domain CLLT_RS06740 PF17755 UvrA DNA-binding domain CLLT_RS06745 PF13722 5TM C-terminal transporter carbon starvation CstA CLLT_RS06745 PF02554 Carbon starvation protein CstA CLLT_RS06755 PF00266 Aminotransferase class-V CLLT_RS06760 PF02601 Exonuclease VII, large subunit CLLT_RS06760 PF13742 OB-fold nucleic acid binding domain CLLT_RS06765 PF01209 ubiE/COQ5 methyltransferase family CLLT_RS06780 PF02780 Transketolase, C-terminal domain CLLT_RS06780 PF02779 Transketolase, pyrimidine binding domain CLLT_RS06780 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLLT_RS06790 PF01706 FliG C-terminal domain CLLT_RS06790 PF14842 FliG N-terminal domain CLLT_RS06790 PF14841 FliG middle domain CLLT_RS06795 PF01514 Secretory protein of YscJ/FliF family CLLT_RS06795 PF08345 Flagellar M-ring protein C-terminal CLLT_RS06800 PF00155 Aminotransferase class I and II CLLT_RS06805 PF01842 ACT domain CLLT_RS06805 PF00800 Prephenate dehydratase CLLT_RS06805 PF01817 Chorismate mutase type II CLLT_RS06815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLLT_RS06815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLLT_RS06825 PF01195 Peptidyl-tRNA hydrolase CLLT_RS06830 PF14693 Ribosomal protein TL5, C-terminal domain CLLT_RS06830 PF01386 Ribosomal L25p family CLLT_RS06835 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLLT_RS06845 PF01584 CheW-like domain CLLT_RS06850 PF01584 CheW-like domain CLLT_RS06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLLT_RS06850 PF01627 Hpt domain CLLT_RS06850 PF00072 Response regulator receiver domain CLLT_RS06850 PF02895 Signal transducing histidine kinase, homodimeric domain CLLT_RS06855 PF00072 Response regulator receiver domain CLLT_RS06855 PF01584 CheW-like domain CLLT_RS06865 PF03449 Transcription elongation factor, N-terminal CLLT_RS06865 PF01272 Transcription elongation factor, GreA/GreB, C-term CLLT_RS06870 PF02684 Lipid-A-disaccharide synthetase CLLT_RS06880 PF03372 Endonuclease/Exonuclease/phosphatase family CLLT_RS06885 PF03498 Cytolethal distending toxin A/C domain CLLT_RS06890 PF07687 Peptidase dimerisation domain CLLT_RS06890 PF01546 Peptidase family M20/M25/M40 CLLT_RS06895 PF03606 C4-dicarboxylate anaerobic carrier CLLT_RS06900 PF03575 Peptidase family S51 CLLT_RS06910 PF01975 Survival protein SurE CLLT_RS06920 PF00905 Penicillin binding protein transpeptidase domain CLLT_RS06935 PF04301 Protein of unknown function (DUF452) CLLT_RS06940 PF00155 Aminotransferase class I and II CLLT_RS06945 PF00202 Aminotransferase class-III CLLT_RS06955 PF00893 Small Multidrug Resistance protein CLLT_RS06960 PF00893 Small Multidrug Resistance protein CLLT_RS06965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS06965 PF00672 HAMP domain CLLT_RS06965 PF02743 Cache domain CLLT_RS06970 PF01112 Asparaginase CLLT_RS06980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLLT_RS06980 PF02142 MGS-like domain CLLT_RS06980 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLLT_RS06995 PF06689 ClpX C4-type zinc finger CLLT_RS06995 PF10431 C-terminal, D2-small domain, of ClpB protein CLLT_RS06995 PF07724 AAA domain (Cdc48 subfamily) CLLT_RS07000 PF00132 Bacterial transferase hexapeptide (six repeats) CLLT_RS07000 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CLLT_RS07005 PF07977 FabA-like domain CLLT_RS07010 PF02677 Epoxyqueuosine reductase QueH CLLT_RS07015 PF00578 AhpC/TSA family CLLT_RS07020 PF01361 Tautomerase enzyme CLLT_RS07025 PF01063 Amino-transferase class IV CLLT_RS07030 PF01145 SPFH domain / Band 7 family CLLT_RS07045 PF00156 Phosphoribosyl transferase domain CLLT_RS07050 PF01113 Dihydrodipicolinate reductase, N-terminus CLLT_RS07050 PF05173 Dihydrodipicolinate reductase, C-terminus CLLT_RS07060 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLLT_RS07065 PF00085 Thioredoxin CLLT_RS07070 PF02021 Uncharacterised protein family UPF0102 CLLT_RS07075 PF03447 Homoserine dehydrogenase, NAD binding domain CLLT_RS07075 PF00742 Homoserine dehydrogenase CLLT_RS07075 PF01842 ACT domain CLLT_RS07080 PF00155 Aminotransferase class I and II CLLT_RS07095 PF00588 SpoU rRNA Methylase family CLLT_RS07095 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLLT_RS07100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLLT_RS07105 PF01197 Ribosomal protein L31 CLLT_RS07110 PF04452 RNA methyltransferase CLLT_RS07135 PF04055 Radical SAM superfamily CLLT_RS07135 PF06463 Molybdenum Cofactor Synthesis C CLLT_RS07165 PF00361 Proton-conducting membrane transporter CLLT_RS07170 PF00361 Proton-conducting membrane transporter CLLT_RS07175 PF00361 Proton-conducting membrane transporter CLLT_RS07175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CLLT_RS07180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CLLT_RS07185 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CLLT_RS07190 PF12838 4Fe-4S dicluster domain CLLT_RS07195 PF00146 NADH dehydrogenase CLLT_RS07200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLLT_RS07200 PF01568 Molydopterin dinucleotide binding domain CLLT_RS07200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLLT_RS07200 PF12838 4Fe-4S dicluster domain CLLT_RS07200 PF00384 Molybdopterin oxidoreductase CLLT_RS07215 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CLLT_RS07220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLLT_RS07225 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLLT_RS07230 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CLLT_RS07235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLLT_RS07235 PF00005 ABC transporter CLLT_RS07240 PF09383 NIL domain CLLT_RS07240 PF00005 ABC transporter CLLT_RS07245 PF00528 Binding-protein-dependent transport system inner membrane component CLLT_RS07245 PF12911 N-terminal TM domain of oligopeptide transport permease C CLLT_RS07250 PF00528 Binding-protein-dependent transport system inner membrane component CLLT_RS07255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLLT_RS07260 PF02028 BCCT, betaine/carnitine/choline family transporter CLLT_RS07270 PF13183 4Fe-4S dicluster domain CLLT_RS07270 PF02589 LUD domain CLLT_RS07270 PF11870 Domain of unknown function (DUF3390) CLLT_RS07275 PF02754 Cysteine-rich domain CLLT_RS07280 PF02652 L-lactate permease CLLT_RS07295 PF07669 Eco57I restriction-modification methylase CLLT_RS07295 PF12950 TaqI-like C-terminal specificity domain CLLT_RS07350 PF03741 Integral membrane protein TerC family CLLT_RS07355 PF00551 Formyl transferase CLLT_RS07360 PF01256 Carbohydrate kinase CLLT_RS07360 PF03853 YjeF-related protein N-terminus CLLT_RS07365 PF02646 RmuC family CLLT_RS07375 PF13335 Magnesium chelatase, subunit ChlI C-terminal CLLT_RS07375 PF01078 Magnesium chelatase, subunit ChlI CLLT_RS07380 PF01327 Polypeptide deformylase CLLT_RS07390 PF00574 Clp protease CLLT_RS07395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLLT_RS07395 PF05697 Bacterial trigger factor protein (TF) CLLT_RS07395 PF05698 Bacterial trigger factor protein (TF) C-terminus CLLT_RS07400 PF01227 GTP cyclohydrolase I CLLT_RS07405 PF18269 T3SS EscN ATPase C-terminal domain CLLT_RS07405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLLT_RS07425 PF00266 Aminotransferase class-V CLLT_RS07430 PF04324 BFD-like [2Fe-2S] binding domain CLLT_RS07430 PF01106 NifU-like domain CLLT_RS07430 PF01592 NifU-like N terminal domain CLLT_RS07435 PF06965 Na+/H+ antiporter 1 CLLT_RS07440 PF06965 Na+/H+ antiporter 1 CLLT_RS07450 PF03458 UPF0126 domain CLLT_RS07460 PF01264 Chorismate synthase CLLT_RS07465 PF14622 Ribonuclease-III-like CLLT_RS07465 PF00035 Double-stranded RNA binding motif CLLT_RS07470 PF00075 RNase H CLLT_RS07480 PF01807 CHC2 zinc finger CLLT_RS07480 PF08275 DNA primase catalytic core, N-terminal domain CLLT_RS07490 PF02743 Cache domain CLLT_RS07490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS07490 PF00672 HAMP domain CLLT_RS07495 PF06832 Penicillin-Binding Protein C-terminus Family CLLT_RS07495 PF00912 Transglycosylase CLLT_RS07495 PF00905 Penicillin binding protein transpeptidase domain CLLT_RS07500 PF00207 Alpha-2-macroglobulin family CLLT_RS07500 PF01835 MG2 domain CLLT_RS07500 PF07703 Alpha-2-macroglobulin bait region domain CLLT_RS07515 PF00924 Mechanosensitive ion channel CLLT_RS07520 PF00484 Carbonic anhydrase CLLT_RS07525 PF01027 Inhibitor of apoptosis-promoting Bax1 CLLT_RS07530 PF03840 Preprotein translocase SecG subunit CLLT_RS07535 PF01765 Ribosome recycling factor CLLT_RS07540 PF00156 Phosphoribosyl transferase domain CLLT_RS07550 PF00268 Ribonucleotide reductase, small chain CLLT_RS07595 PF03963 Flagellar hook capping protein - N-terminal region CLLT_RS07600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CLLT_RS07600 PF00460 Flagella basal body rod protein CLLT_RS07600 PF07559 Flagellar basal body protein FlaE CLLT_RS07620 PF02661 Fic/DOC family CLLT_RS07625 PF17845 FbpC C-terminal regulatory nucleotide binding domain CLLT_RS07625 PF00005 ABC transporter CLLT_RS07635 PF13416 Bacterial extracellular solute-binding protein CLLT_RS07640 PF00970 Oxidoreductase FAD-binding domain CLLT_RS07640 PF00042 Globin CLLT_RS07640 PF00175 Oxidoreductase NAD-binding domain CLLT_RS07645 PF00005 ABC transporter CLLT_RS07670 PF08334 Type II secretion system (T2SS), protein G CLLT_RS07670 PF07963 Prokaryotic N-terminal methylation motif CLLT_RS07675 PF00814 Glycoprotease family CLLT_RS07685 PF13288 DXP reductoisomerase C-terminal domain CLLT_RS07685 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLLT_RS07685 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CLLT_RS07705 PF12804 MobA-like NTP transferase domain CLLT_RS07710 PF13726 Na+-H+ antiporter family CLLT_RS07710 PF03553 Na+/H+ antiporter family CLLT_RS07715 PF00920 Dehydratase family CLLT_RS07740 PF02743 Cache domain CLLT_RS07740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS07740 PF00672 HAMP domain CLLT_RS07745 PF00672 HAMP domain CLLT_RS07745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLLT_RS07745 PF02743 Cache domain CLLT_RS07755 PF00004 ATPase family associated with various cellular activities (AAA) CLLT_RS07755 PF16450 Proteasomal ATPase OB C-terminal domain CLLT_RS07755 PF17758 Proteasomal ATPase OB N-terminal domain CLLT_RS07765 PF04461 Protein of unknown function (DUF520) CLLT_RS07770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLLT_RS07770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLLT_RS07775 PF03738 Glutathionylspermidine synthase preATP-grasp CLLT_RS07785 PF01810 LysE type translocator CLLT_RS07790 PF01165 Ribosomal protein S21 CLLT_RS07810 PF00873 AcrB/AcrD/AcrF family CLLT_RS07815 PF02321 Outer membrane efflux protein CLLT_RS07825 PF06969 HemN C-terminal domain CLLT_RS07825 PF04055 Radical SAM superfamily CLLT_RS07835 PF01252 Signal peptidase (SPase) II CLLT_RS07840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLLT_RS07840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLLT_RS07840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLLT_RS07850 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLLT_RS07850 PF12002 MgsA AAA+ ATPase C terminal CLLT_RS07850 PF16193 AAA C-terminal domain CLLT_RS07850 PF01661 Macro domain CLLT_RS07870 PF02075 Crossover junction endodeoxyribonuclease RuvC