locus-tag	class	description
CLLT_RS00010	COG0592	DNA-directed DNA polymerase activity
CLLT_RS00015	COG0187	DNA topoisomerase II activity
CLLT_RS00020	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CLLT_RS00030	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
CLLT_RS00050	COG2824	Alkylphosphonate utilization operon protein PhnA
CLLT_RS00060	COG0504	CTP synthase activity
CLLT_RS00065	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CLLT_RS00070	COG0741	lytic transglycosylase activity
CLLT_RS00075	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CLLT_RS00080	COG0268	Binds directly to 16S ribosomal RNA
CLLT_RS00090	COG1187	pseudouridine synthase activity
CLLT_RS00095	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CLLT_RS00110	COG0820	rRNA (adenine-C2-)-methyltransferase activity
CLLT_RS00120	COG0564	pseudouridine synthase activity
CLLT_RS00125	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CLLT_RS00130	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLLT_RS00135	COG1297	OPT oligopeptide transporter protein
CLLT_RS00140	COG1968	undecaprenyl-diphosphatase activity
CLLT_RS00145	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CLLT_RS00150	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CLLT_RS00160	COG2378	regulation of single-species biofilm formation
CLLT_RS00170	COG0714	Associated with various cellular activities
CLLT_RS00175	COG0291	Belongs to the bacterial ribosomal protein bL35 family
CLLT_RS00180	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CLLT_RS00185	COG1793	dna ligase
CLLT_RS00190	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLLT_RS00195	COG1121	(ABC) transporter
CLLT_RS00210	COG0418	dihydroorotase activity
CLLT_RS00225	COG2194	sulfuric ester hydrolase activity
CLLT_RS00230	COG0708	Exodeoxyribonuclease III
CLLT_RS00245	COG1328	CTP reductase activity
CLLT_RS00250	COG0602	queuosine metabolic process
CLLT_RS00255	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CLLT_RS00260	COG3069	C4-dicarboxylate transmembrane transporter activity
CLLT_RS00265	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
CLLT_RS00275	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CLLT_RS00280	COG2992	FlgJ-related protein
CLLT_RS00295	COG0051	transcription antitermination factor activity, RNA binding
CLLT_RS00300	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CLLT_RS00305	COG0088	Forms part of the polypeptide exit tunnel
CLLT_RS00310	COG0089	rRNA binding
CLLT_RS00315	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CLLT_RS00320	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLLT_RS00325	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CLLT_RS00330	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CLLT_RS00335	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLLT_RS00340	COG0255	Belongs to the universal ribosomal protein uL29 family
CLLT_RS00345	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CLLT_RS00350	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CLLT_RS00355	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CLLT_RS00360	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CLLT_RS00365	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLLT_RS00370	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CLLT_RS00375	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CLLT_RS00380	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CLLT_RS00385	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CLLT_RS00390	COG0200	Binds to the 23S rRNA
CLLT_RS00395	COG0201	protein transport
CLLT_RS00400	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CLLT_RS00405	COG0252	asparaginase activity
CLLT_RS00410	COG1592	Rubrerythrin
CLLT_RS00425	COG0814	amino acid
CLLT_RS00430	COG1760	l-serine dehydratase
CLLT_RS00435	COG0024	Methionine aminopeptidase
CLLT_RS00440	COG0840	transmembrane signaling receptor activity
CLLT_RS00445	COG1858	cytochrome C peroxidase
CLLT_RS00460	COG0257	Belongs to the bacterial ribosomal protein bL36 family
CLLT_RS00465	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CLLT_RS00470	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLLT_RS00475	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CLLT_RS00485	COG0203	ribosomal protein L17
CLLT_RS00490	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
CLLT_RS00500	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CLLT_RS00500	COG0131	Imidazoleglycerol-phosphate dehydratase
CLLT_RS00525	COG0107	imidazoleglycerol-phosphate synthase activity
CLLT_RS00530	COG0140	phosphoribosyl-ATP diphosphatase activity
CLLT_RS00530	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CLLT_RS00535	COG0840	transmembrane signaling receptor activity
CLLT_RS00545	COG1749	Flagellar hook protein flgE
CLLT_RS00555	COG2814	Major facilitator Superfamily
CLLT_RS00560	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
CLLT_RS00570	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLLT_RS00575	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CLLT_RS00590	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CLLT_RS00595	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CLLT_RS00640	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CLLT_RS00645	COG0642	Histidine kinase
CLLT_RS00650	COG0745	RESPONSE REGULATOR receiver
CLLT_RS00665	COG1194	a g-specific adenine glycosylase
CLLT_RS00695	COG0569	domain protein
CLLT_RS00700	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CLLT_RS00705	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CLLT_RS00710	COG1027	Aspartate ammonia-lyase
CLLT_RS00715	COG0840	transmembrane signaling receptor activity
CLLT_RS00720	COG0840	transmembrane signaling receptor activity
CLLT_RS00730	COG2921	Belongs to the UPF0250 family
CLLT_RS00735	COG0315	cyclic pyranopterin monophosphate synthase activity
CLLT_RS00755	COG2346	COG2346, Truncated hemoglobins
CLLT_RS00770	COG0148	phosphopyruvate hydratase activity
CLLT_RS00775	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CLLT_RS00785	COG1987	bacterial-type flagellum assembly
CLLT_RS00800	COG1218	3'(2'),5'-bisphosphate nucleotidase
CLLT_RS00805	COG0569	domain protein
CLLT_RS00805	COG0475	glutathione-regulated potassium exporter activity
CLLT_RS00810	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CLLT_RS00815	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLLT_RS00850	COG2089	acid synthase
CLLT_RS00860	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CLLT_RS00860	COG1776	CheC inhibitor of MCP methylation
CLLT_RS00870	COG0248	Ppx GppA phosphatase
CLLT_RS00875	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLLT_RS00880	COG0745	RESPONSE REGULATOR receiver
CLLT_RS00890	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CLLT_RS00920	COG0261	This protein binds to 23S rRNA in the presence of protein L20
CLLT_RS00925	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CLLT_RS00930	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CLLT_RS00935	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CLLT_RS00940	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CLLT_RS00940	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CLLT_RS00945	COG1192	Involved in chromosome partitioning
CLLT_RS00950	COG1475	DNA binding
CLLT_RS00965	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLLT_RS00970	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CLLT_RS00975	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CLLT_RS00980	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CLLT_RS00985	COG0355	proton-transporting ATP synthase activity, rotational mechanism
CLLT_RS00990	COG0811	peptide transport
CLLT_RS00995	COG0848	biopolymer transport protein
CLLT_RS01010	COG2885	chlorophyll binding
CLLT_RS01025	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CLLT_RS01030	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLLT_RS01035	COG0037	tRNA processing
CLLT_RS01055	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLLT_RS01070	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CLLT_RS01075	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
CLLT_RS01080	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLLT_RS01085	COG0287	Prephenate dehydrogenase
CLLT_RS01095	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
CLLT_RS01105	COG0083	homoserine kinase activity
CLLT_RS01115	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CLLT_RS01125	COG0779	Required for maturation of 30S ribosomal subunits
CLLT_RS01145	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLLT_RS01145	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLLT_RS01150	COG0616	signal peptide processing
CLLT_RS01155	COG0402	S-adenosylhomocysteine deaminase activity
CLLT_RS01160	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
CLLT_RS01165	COG0006	proline dipeptidase activity
CLLT_RS01170	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CLLT_RS01175	COG1419	protein localization to endoplasmic reticulum
CLLT_RS01180	COG0455	bacterial-type flagellum organization
CLLT_RS01190	COG1191	sigma factor activity
CLLT_RS01195	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CLLT_RS01200	COG1776	CheC inhibitor of MCP methylation
CLLT_RS01200	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CLLT_RS01205	COG1611	Belongs to the LOG family
CLLT_RS01210	COG0482	sulfurtransferase activity
CLLT_RS01220	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CLLT_RS01225	COG2046	Belongs to the sulfate adenylyltransferase family
CLLT_RS01230	COG0745	RESPONSE REGULATOR receiver
CLLT_RS01235	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
CLLT_RS01235	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
CLLT_RS01240	COG0489	protein tyrosine kinase activity
CLLT_RS01245	COG2171	N-acyltransferase activity
CLLT_RS01250	COG0783	Belongs to the Dps family
CLLT_RS01255	COG0166	Belongs to the GPI family
CLLT_RS01265	COG1739	Uncharacterized protein family UPF0029
CLLT_RS01280	COG0488	(ABC) transporter
CLLT_RS01290	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CLLT_RS01305	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CLLT_RS01330	COG2855	membrane
CLLT_RS01335	COG0583	DNA-binding transcription factor activity
CLLT_RS01345	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLLT_RS01360	COG0736	holo-[acyl-carrier-protein] synthase activity
CLLT_RS01365	COG1580	Controls the rotational direction of flagella during chemotaxis
CLLT_RS01375	COG0753	catalase activity
CLLT_RS01385	COG0165	Argininosuccinate lyase
CLLT_RS01395	COG0251	oxidation-reduction process
CLLT_RS01400	COG3069	C4-dicarboxylate transmembrane transporter activity
CLLT_RS01415	COG2079	MmgE PrpD family protein
CLLT_RS01420	COG1918	ferrous iron import across plasma membrane
CLLT_RS01425	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
CLLT_RS01430	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CLLT_RS01435	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLLT_RS01440	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLLT_RS01445	COG0825	malonyl-CoA metabolic process
CLLT_RS01455	COG2833	Protein of unknown function (DUF455)
CLLT_RS01480	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
CLLT_RS01480	COG0517	IMP dehydrogenase activity
CLLT_RS01490	COG1442	glycosyl transferase family 8
CLLT_RS01490	COG1216	Glycosyl transferase, family 2
CLLT_RS01495	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CLLT_RS01495	COG1215	transferase activity, transferring glycosyl groups
CLLT_RS01500	COG1215	transferase activity, transferring glycosyl groups
CLLT_RS01500	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
CLLT_RS01515	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLLT_RS01530	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CLLT_RS01545	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CLLT_RS01560	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
CLLT_RS01565	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLLT_RS01575	COG1218	3'(2'),5'-bisphosphate nucleotidase
CLLT_RS01580	COG0175	sulfate reduction
CLLT_RS01585	COG2895	sulfate adenylyltransferase (ATP) activity
CLLT_RS01590	COG0471	metal ion transport
CLLT_RS01590	COG3273	potassium ion transport
CLLT_RS01595	COG0529	Catalyzes the synthesis of activated sulfate
CLLT_RS01600	COG1218	3'(2'),5'-bisphosphate nucleotidase
CLLT_RS01640	COG0195	Participates in both transcription termination and antitermination
CLLT_RS01655	COG2121	Domain of unknown function (DUF374)
CLLT_RS01680	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CLLT_RS01690	COG1053	succinate dehydrogenase
CLLT_RS01695	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CLLT_RS01715	COG0748	coenzyme F420 binding
CLLT_RS01720	COG2249	NAD(P)H dehydrogenase (quinone) activity
CLLT_RS01725	COG1733	regulation of RNA biosynthetic process
CLLT_RS01735	COG1064	alcohol dehydrogenase
CLLT_RS01750	COG1204	response to ionizing radiation
CLLT_RS01760	COG3177	Filamentation induced by cAMP protein fic
CLLT_RS01775	COG0314	molybdopterin synthase activity
CLLT_RS01810	COG0243	molybdopterin cofactor binding
CLLT_RS01815	COG3383	formate dehydrogenase (NAD+) activity
CLLT_RS01820	COG0437	4 iron, 4 sulfur cluster binding
CLLT_RS01830	COG0425	Belongs to the sulfur carrier protein TusA family
CLLT_RS01845	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CLLT_RS01850	COG0425	Belongs to the sulfur carrier protein TusA family
CLLT_RS01865	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CLLT_RS01885	COG0505	Belongs to the CarA family
CLLT_RS01940	COG1074	ATP-dependent DNA helicase activity
CLLT_RS01945	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CLLT_RS01950	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
CLLT_RS01955	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CLLT_RS01955	COG2885	chlorophyll binding
CLLT_RS01960	COG0546	phosphoglycolate phosphatase activity
CLLT_RS01985	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CLLT_RS01990	COG1459	type II secretion system
CLLT_RS02020	COG3951	Flagellar rod assembly protein muramidase FlgJ
CLLT_RS02025	COG1706	bacterial-type flagellum-dependent cell motility
CLLT_RS02050	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CLLT_RS02070	COG0716	FMN binding
CLLT_RS02095	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CLLT_RS02105	COG0126	phosphoglycerate kinase activity
CLLT_RS02110	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CLLT_RS02145	COG0114	fumarate hydratase activity
CLLT_RS02150	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CLLT_RS02160	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
CLLT_RS02165	COG2252	PERMEase
CLLT_RS02175	COG0243	molybdopterin cofactor binding
CLLT_RS02195	COG4773	Receptor
CLLT_RS02200	COG3022	response to hydroperoxide
CLLT_RS02225	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CLLT_RS02230	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CLLT_RS02245	COG0250	Participates in transcription elongation, termination and antitermination
CLLT_RS02250	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CLLT_RS02255	COG0081	regulation of translation
CLLT_RS02260	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CLLT_RS02265	COG0222	ribosome binding
CLLT_RS02270	COG0085	RNA polymerase activity
CLLT_RS02275	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLLT_RS02280	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CLLT_RS02285	COG0049	tRNA binding
CLLT_RS02290	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLLT_RS02295	COG1253	flavin adenine dinucleotide binding
CLLT_RS02300	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CLLT_RS02305	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CLLT_RS02355	COG0848	biopolymer transport protein
CLLT_RS02360	COG0811	peptide transport
CLLT_RS02365	COG4771	TonB-dependent receptor
CLLT_RS02375	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CLLT_RS02380	COG2217	Heavy metal translocating P-type atpase
CLLT_RS02395	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CLLT_RS02400	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLLT_RS02405	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
CLLT_RS02405	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
CLLT_RS02410	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
CLLT_RS02420	COG0579	oxidoreductase
CLLT_RS02445	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLLT_RS02465	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CLLT_RS02480	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CLLT_RS02485	COG0484	heat shock protein binding
CLLT_RS02490	COG0745	RESPONSE REGULATOR receiver
CLLT_RS02495	COG0642	Histidine kinase
CLLT_RS02500	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CLLT_RS02525	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CLLT_RS02525	COG0519	Catalyzes the synthesis of GMP from XMP
CLLT_RS02530	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
CLLT_RS02550	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CLLT_RS02560	COG1185	polyribonucleotide nucleotidyltransferase activity
CLLT_RS02630	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CLLT_RS02640	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
CLLT_RS02645	COG0653	protein targeting
CLLT_RS02650	COG2204	response regulator
CLLT_RS02655	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLLT_RS02665	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
CLLT_RS02670	COG0731	radical SAM domain protein
CLLT_RS02690	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CLLT_RS02700	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CLLT_RS02705	COG1160	GTP binding
CLLT_RS02715	COG2233	PERMEase
CLLT_RS02725	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
CLLT_RS02730	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CLLT_RS02735	COG0284	orotidine-5'-phosphate decarboxylase activity
CLLT_RS02745	COG0840	transmembrane signaling receptor activity
CLLT_RS02750	COG0138	bifunctional purine biosynthesis protein purh
CLLT_RS02755	COG0484	heat shock protein binding
CLLT_RS02760	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CLLT_RS02775	COG0706	membrane insertase activity
CLLT_RS02790	COG0230	Belongs to the bacterial ribosomal protein bL34 family
CLLT_RS02810	COG0824	Thioesterase
CLLT_RS02835	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CLLT_RS02840	COG2195	Cleaves the N-terminal amino acid of tripeptides
CLLT_RS02860	COG0500	methyltransferase
CLLT_RS02875	COG2890	protein-(glutamine-N5) methyltransferase activity
CLLT_RS02880	COG0501	Belongs to the peptidase M48B family
CLLT_RS02895	COG1408	metallophosphoesterase
CLLT_RS02900	COG0688	phosphatidylethanolamine metabolic process
CLLT_RS02905	COG2257	FlhB HrpN YscU SpaS Family
CLLT_RS02930	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
CLLT_RS02945	COG0681	Belongs to the peptidase S26 family
CLLT_RS02955	COG0343	queuine tRNA-ribosyltransferase activity
CLLT_RS02970	COG0439	Biotin carboxylase
CLLT_RS02990	COG0772	Belongs to the SEDS family
CLLT_RS03010	COG0642	Histidine kinase
CLLT_RS03020	COG0582	viral genome integration into host DNA
CLLT_RS03230	COG3646	Phage regulatory protein
CLLT_RS03305	COG1126	abc transporter atp-binding protein
CLLT_RS03310	COG0765	amino acid transport
CLLT_RS03315	COG1115	amino acid carrier protein
CLLT_RS03330	COG0739	heme binding
CLLT_RS03340	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CLLT_RS03340	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CLLT_RS03360	COG0772	Belongs to the SEDS family
CLLT_RS03365	COG0564	pseudouridine synthase activity
CLLT_RS03375	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CLLT_RS03380	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLLT_RS03395	COG0528	UMP kinase activity
CLLT_RS03400	COG1758	RNA polymerase activity
CLLT_RS03405	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLLT_RS03410	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CLLT_RS03435	COG0750	zinc metalloprotease
CLLT_RS03445	COG1028	Short-chain dehydrogenase reductase Sdr
CLLT_RS03450	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLLT_RS03455	COG0612	Peptidase, M16
CLLT_RS03460	COG0167	dihydroorotate dehydrogenase activity
CLLT_RS03465	COG1132	(ABC) transporter
CLLT_RS03470	COG0215	cysteine-tRNA ligase activity
CLLT_RS03475	COG0728	peptidoglycan biosynthetic process
CLLT_RS03485	COG0632	four-way junction helicase activity
CLLT_RS03490	COG1181	Belongs to the D-alanine--D-alanine ligase family
CLLT_RS03510	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
CLLT_RS03515	COG0280	phosphate acetyltransferase
CLLT_RS03520	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLLT_RS03525	COG1464	Belongs to the NlpA lipoprotein family
CLLT_RS03535	COG2011	ABC-type metal ion transport system permease component
CLLT_RS03540	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLLT_RS03555	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CLLT_RS03560	COG0563	adenylate kinase activity
CLLT_RS03570	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CLLT_RS03575	COG0497	DNA recombination
CLLT_RS03585	COG0084	hydrolase, TatD family'
CLLT_RS03590	COG0741	lytic transglycosylase activity
CLLT_RS03590	COG1388	LysM domain
CLLT_RS03595	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CLLT_RS03615	COG0218	Necessary for normal cell division and for the maintenance of normal septation
CLLT_RS03630	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
CLLT_RS03635	COG0805	protein transport
CLLT_RS03645	COG0701	Predicted permease
CLLT_RS03650	COG0640	Transcriptional regulator
CLLT_RS03655	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CLLT_RS03665	COG0527	aspartate kinase activity
CLLT_RS03680	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CLLT_RS03685	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CLLT_RS03690	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CLLT_RS03700	COG2890	protein-(glutamine-N5) methyltransferase activity
CLLT_RS03705	COG0012	GTP binding
CLLT_RS03710	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
CLLT_RS03730	COG0698	ribose 5-phosphate isomerase
CLLT_RS03735	COG2201	protein-glutamate methylesterase activity
CLLT_RS03740	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CLLT_RS03750	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
CLLT_RS03755	COG0612	Peptidase, M16
CLLT_RS03760	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CLLT_RS03765	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CLLT_RS03775	COG0765	amino acid transport
CLLT_RS03785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLLT_RS03790	COG0477	Major facilitator Superfamily
CLLT_RS03800	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CLLT_RS03810	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CLLT_RS03815	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLLT_RS03820	COG0521	Mo-molybdopterin cofactor biosynthetic process
CLLT_RS03840	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLLT_RS03845	COG0204	Acyl-transferase
CLLT_RS03855	COG0047	phosphoribosylformylglycinamidine synthase activity
CLLT_RS03860	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CLLT_RS03865	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
CLLT_RS03870	COG0793	Belongs to the peptidase S41A family
CLLT_RS03875	COG0542	response to heat
CLLT_RS03880	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CLLT_RS03885	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
CLLT_RS03890	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
CLLT_RS03895	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CLLT_RS03940	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLLT_RS03940	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLLT_RS03955	COG2353	YceI-like domain
CLLT_RS03960	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
CLLT_RS03995	COG1794	racemase activity, acting on amino acids and derivatives
CLLT_RS04000	COG0582	viral genome integration into host DNA
CLLT_RS04005	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CLLT_RS04010	COG0303	'Molybdopterin
CLLT_RS04035	COG0163	prenyltransferase activity
CLLT_RS04040	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CLLT_RS04045	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CLLT_RS04050	COG0124	histidyl-tRNA synthetase
CLLT_RS04055	COG1166	arginine decarboxylase activity
CLLT_RS04060	COG1045	serine acetyltransferase
CLLT_RS04070	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CLLT_RS04075	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CLLT_RS04085	COG0802	atpase or kinase
CLLT_RS04090	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CLLT_RS04095	COG0137	argininosuccinate synthase activity
CLLT_RS04100	COG0359	binds to the 23S rRNA
CLLT_RS04105	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CLLT_RS04115	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CLLT_RS04145	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CLLT_RS04155	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CLLT_RS04160	COG0181	hydroxymethylbilane synthase activity
CLLT_RS04170	COG0442	prolyl-tRNA aminoacylation
CLLT_RS04175	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
CLLT_RS04180	COG0142	geranyltranstransferase activity
CLLT_RS04195	COG0546	phosphoglycolate phosphatase activity
CLLT_RS04210	COG0789	Transcriptional regulator
CLLT_RS04215	COG0484	heat shock protein binding
CLLT_RS04220	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLLT_RS04225	COG0745	RESPONSE REGULATOR receiver
CLLT_RS04230	COG0642	Histidine kinase
CLLT_RS04235	COG0210	DNA helicase
CLLT_RS04240	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CLLT_RS04245	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CLLT_RS04255	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLLT_RS04260	COG0375	protein maturation
CLLT_RS04265	COG0309	Hydrogenase expression formation protein (HypE)
CLLT_RS04270	COG0409	Hydrogenase expression formation protein
CLLT_RS04275	COG0298	carbon dioxide binding
CLLT_RS04285	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CLLT_RS04290	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CLLT_RS04300	COG0534	Mate efflux family protein
CLLT_RS04315	COG0581	inorganic phosphate transmembrane transporter activity
CLLT_RS04325	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CLLT_RS04335	COG2205	protein histidine kinase activity
CLLT_RS04340	COG1528	Iron-storage protein
CLLT_RS04350	COG0484	heat shock protein binding
CLLT_RS04365	COG1333	cytochrome c biogenesis protein
CLLT_RS04365	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CLLT_RS04375	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CLLT_RS04380	COG0440	acetolactate synthase activity
CLLT_RS04385	COG0028	Belongs to the TPP enzyme family
CLLT_RS04395	COG1013	pyruvate-flavodoxin oxidoreductase activity
CLLT_RS04400	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CLLT_RS04400	COG0674	pyruvate-flavodoxin oxidoreductase activity
CLLT_RS04410	COG0039	L-malate dehydrogenase activity
CLLT_RS04425	COG1674	ftsk spoiiie
CLLT_RS04425	COG1196	nuclear chromosome segregation
CLLT_RS04430	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CLLT_RS04490	COG0587	DNA-directed DNA polymerase activity
CLLT_RS04500	COG0693	protein deglycase activity
CLLT_RS04510	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CLLT_RS04515	COG2957	Belongs to the agmatine deiminase family
CLLT_RS04530	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
CLLT_RS04540	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CLLT_RS04545	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
CLLT_RS04550	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLLT_RS04555	COG0765	amino acid transport
CLLT_RS04565	COG2258	MOSC domain
CLLT_RS04570	COG1252	NADH dehydrogenase
CLLT_RS04575	COG0733	neurotransmitter:sodium symporter activity
CLLT_RS04595	COG0191	fructose-bisphosphate aldolase activity
CLLT_RS04600	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLLT_RS04605	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLLT_RS04610	COG0786	glutamate:sodium symporter activity
CLLT_RS04620	COG1136	(ABC) transporter
CLLT_RS04620	COG0577	efflux transmembrane transporter activity
CLLT_RS04625	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLLT_RS04630	COG0778	Nitroreductase
CLLT_RS04640	COG0492	ferredoxin-NADP+ reductase activity
CLLT_RS04645	COG2813	Specifically methylates the guanine in position
CLLT_RS04660	COG0134	indole-3-glycerol-phosphate synthase activity
CLLT_RS04670	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
CLLT_RS04685	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CLLT_RS04705	COG0443	Heat shock 70 kDa protein
CLLT_RS04710	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CLLT_RS04715	COG1420	regulation of RNA biosynthetic process
CLLT_RS04730	COG2404	hydrolase activity, acting on ester bonds
CLLT_RS04735	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CLLT_RS04740	COG1959	2 iron, 2 sulfur cluster binding
CLLT_RS04745	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CLLT_RS04750	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CLLT_RS04750	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CLLT_RS04755	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CLLT_RS04770	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CLLT_RS04775	COG0557	exoribonuclease II activity
CLLT_RS04785	COG0360	Binds together with S18 to 16S ribosomal RNA
CLLT_RS04790	COG0629	single-stranded DNA binding
CLLT_RS04795	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CLLT_RS04800	COG2095	MarC family integral membrane protein
CLLT_RS04820	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CLLT_RS04825	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
CLLT_RS04835	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CLLT_RS04855	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CLLT_RS04865	COG2814	Major facilitator Superfamily
CLLT_RS04875	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLLT_RS04880	COG1757	Na H antiporter
CLLT_RS04885	COG4221	oxidoreductase activity
CLLT_RS04890	COG0666	response to abiotic stimulus
CLLT_RS04915	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
CLLT_RS04935	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CLLT_RS04940	COG1338	Plays a role in the flagellum-specific transport system
CLLT_RS04950	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CLLT_RS04980	COG1393	Belongs to the ArsC family
CLLT_RS04985	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
CLLT_RS04995	COG0335	large ribosomal subunit rRNA binding
CLLT_RS05000	COG0336	Belongs to the RNA methyltransferase TrmD family
CLLT_RS05010	COG1837	Belongs to the UPF0109 family
CLLT_RS05015	COG0228	four-way junction DNA binding
CLLT_RS05020	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLLT_RS05025	COG0564	pseudouridine synthase activity
CLLT_RS05030	COG1519	Transferase
CLLT_RS05040	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CLLT_RS05045	COG0752	glycyl-tRNA synthetase alpha subunit
CLLT_RS05055	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CLLT_RS05070	COG0174	glutamine synthetase
CLLT_RS05075	COG0788	formyltetrahydrofolate deformylase activity
CLLT_RS05095	COG2807	transmembrane transport
CLLT_RS05115	COG3043	anaerobic respiration
CLLT_RS05120	COG0348	domain, Protein
CLLT_RS05125	COG0437	4 iron, 4 sulfur cluster binding
CLLT_RS05130	COG0243	molybdopterin cofactor binding
CLLT_RS05140	COG4786	Flagellar basal body rod
CLLT_RS05145	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CLLT_RS05150	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CLLT_RS05160	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
CLLT_RS05175	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CLLT_RS05180	COG0227	Belongs to the bacterial ribosomal protein bL28 family
CLLT_RS05195	COG0840	transmembrane signaling receptor activity
CLLT_RS05205	COG0459	protein refolding
CLLT_RS05210	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CLLT_RS05230	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CLLT_RS05240	COG0739	heme binding
CLLT_RS05245	COG0285	dihydrofolate synthase activity
CLLT_RS05260	COG0495	leucyl-tRNA aminoacylation
CLLT_RS05270	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLLT_RS05275	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLLT_RS05280	COG1862	Preprotein translocase
CLLT_RS05285	COG0815	Transfers the fatty acyl group on membrane lipoproteins
CLLT_RS05290	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CLLT_RS05295	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
CLLT_RS05300	COG0540	Belongs to the ATCase OTCase family
CLLT_RS05315	COG0210	DNA helicase
CLLT_RS05335	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CLLT_RS05350	COG0542	response to heat
CLLT_RS05355	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
CLLT_RS05360	COG1815	bacterial-type flagellum-dependent cell motility
CLLT_RS05365	COG1558	bacterial-type flagellum-dependent cell motility
CLLT_RS05370	COG1677	Flagellar hook-basal body complex protein FliE
CLLT_RS05380	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
CLLT_RS05385	COG0673	inositol 2-dehydrogenase activity
CLLT_RS05400	COG0424	maF-like protein
CLLT_RS05410	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
CLLT_RS05420	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
CLLT_RS05425	COG2217	Heavy metal translocating P-type atpase
CLLT_RS05445	COG0217	transcriptional regulatory protein
CLLT_RS05450	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CLLT_RS05460	COG0586	Pfam SNARE associated Golgi protein
CLLT_RS05470	COG3610	response to peptide
CLLT_RS05475	COG0018	arginyl-trna synthetase
CLLT_RS05480	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CLLT_RS05485	COG0194	GDP metabolic process
CLLT_RS05495	COG1684	flagellar biosynthetic protein fliR
CLLT_RS05500	COG1136	(ABC) transporter
CLLT_RS05505	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CLLT_RS05510	COG0052	Belongs to the universal ribosomal protein uS2 family
CLLT_RS05525	COG0723	plastoquinol--plastocyanin reductase activity
CLLT_RS05550	COG0642	Histidine kinase
CLLT_RS05575	COG4773	Receptor
CLLT_RS05590	COG0683	leucine binding
CLLT_RS05615	COG1333	cytochrome c biogenesis protein
CLLT_RS05615	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CLLT_RS05625	COG0481	GTPase activity
CLLT_RS05645	COG0352	thiamine-phosphate diphosphorylase activity
CLLT_RS05650	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CLLT_RS05655	COG0351	phosphomethylpyrimidine kinase
CLLT_RS05660	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CLLT_RS05675	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CLLT_RS05680	COG0113	porphobilinogen synthase activity
CLLT_RS05690	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CLLT_RS05695	COG2181	nitrate reductase activity
CLLT_RS05695	COG0247	lactate metabolic process
CLLT_RS05705	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLLT_RS05725	COG1999	signal sequence binding
CLLT_RS05730	COG4591	ABC-type transport system involved in lipoprotein release permease component
CLLT_RS05745	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLLT_RS05760	COG0471	metal ion transport
CLLT_RS05765	COG0352	thiamine-phosphate diphosphorylase activity
CLLT_RS05770	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CLLT_RS05795	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CLLT_RS05800	COG1280	lysine exporter protein (LysE YggA)
CLLT_RS05805	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLLT_RS05810	COG1193	negative regulation of DNA recombination
CLLT_RS05835	COG0516	GMP reductase activity
CLLT_RS05835	COG0517	IMP dehydrogenase activity
CLLT_RS05840	COG0154	amidase activity
CLLT_RS05845	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CLLT_RS05850	COG1058	Belongs to the CinA family
CLLT_RS05850	COG1546	Belongs to the CinA family
CLLT_RS05865	COG1136	(ABC) transporter
CLLT_RS05865	COG0577	efflux transmembrane transporter activity
CLLT_RS05890	COG0672	)-iron permease
CLLT_RS05925	COG0275	rRNA processing
CLLT_RS05940	COG0849	cell division
CLLT_RS05945	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CLLT_RS05955	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CLLT_RS05960	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLLT_RS05985	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLLT_RS05990	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLLT_RS06000	COG0539	negative regulation of cytoplasmic translation
CLLT_RS06000	COG1185	polyribonucleotide nucleotidyltransferase activity
CLLT_RS06005	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CLLT_RS06010	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
CLLT_RS06020	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CLLT_RS06025	COG0537	adenosine 5'-monophosphoramidase activity
CLLT_RS06030	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
CLLT_RS06040	COG0733	neurotransmitter:sodium symporter activity
CLLT_RS06045	COG0733	neurotransmitter:sodium symporter activity
CLLT_RS06050	COG0733	neurotransmitter:sodium symporter activity
CLLT_RS06055	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLLT_RS06075	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CLLT_RS06080	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
CLLT_RS06085	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLLT_RS06095	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CLLT_RS06105	COG0552	protein localization to endoplasmic reticulum
CLLT_RS06110	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLLT_RS06135	COG1295	ribonuclease BN
CLLT_RS06150	COG0739	heme binding
CLLT_RS06155	COG2239	Acts as a magnesium transporter
CLLT_RS06160	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CLLT_RS06165	COG0305	Participates in initiation and elongation during chromosome replication
CLLT_RS06170	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CLLT_RS06175	COG0776	regulation of translation
CLLT_RS06190	COG1696	Membrane protein involved in D-alanine export
CLLT_RS06200	COG1442	glycosyl transferase family 8
CLLT_RS06200	COG1216	Glycosyl transferase, family 2
CLLT_RS06205	COG1083	cytidylyl-transferase
CLLT_RS06210	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
CLLT_RS06215	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CLLT_RS06220	COG2089	acid synthase
CLLT_RS06235	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLLT_RS06250	COG1216	Glycosyl transferase, family 2
CLLT_RS06250	COG1442	glycosyl transferase family 8
CLLT_RS06275	COG0859	PFAM glycosyl transferase family 9
CLLT_RS06285	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CLLT_RS06290	COG1132	(ABC) transporter
CLLT_RS06295	COG0438	transferase activity, transferring glycosyl groups
CLLT_RS06300	COG0438	transferase activity, transferring glycosyl groups
CLLT_RS06305	COG1287	oligosaccharyl transferase activity
CLLT_RS06310	COG0438	transferase activity, transferring glycosyl groups
CLLT_RS06315	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CLLT_RS06320	COG0110	maltose O-acetyltransferase activity
CLLT_RS06325	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CLLT_RS06330	COG1086	Polysaccharide biosynthesis protein
CLLT_RS06335	COG0745	RESPONSE REGULATOR receiver
CLLT_RS06340	COG2264	protein methyltransferase activity
CLLT_RS06345	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLLT_RS06355	COG1183	phosphatidylcholine synthase activity
CLLT_RS06370	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CLLT_RS06385	COG1607	acyl-coa hydrolase
CLLT_RS06390	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLLT_RS06405	COG2255	four-way junction helicase activity
CLLT_RS06410	COG0628	permease
CLLT_RS06415	COG2814	Major facilitator Superfamily
CLLT_RS06420	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CLLT_RS06460	COG1921	L-seryl-tRNASec selenium transferase activity
CLLT_RS06465	COG3276	selenocysteine insertion sequence binding
CLLT_RS06480	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CLLT_RS06485	COG1427	Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
CLLT_RS06490	COG0281	malic enzyme
CLLT_RS06490	COG0280	phosphate acetyltransferase
CLLT_RS06495	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLLT_RS06505	COG0439	Biotin carboxylase
CLLT_RS06510	COG0511	ligase activity, forming carbon-carbon bonds
CLLT_RS06515	COG0717	Belongs to the dCTP deaminase family
CLLT_RS06520	COG1086	Polysaccharide biosynthesis protein
CLLT_RS06525	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CLLT_RS06530	COG4310	Domain of unknown function (DUF2172)
CLLT_RS06565	COG2855	membrane
CLLT_RS06585	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLLT_RS06600	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CLLT_RS06610	COG1028	Short-chain dehydrogenase reductase Sdr
CLLT_RS06615	COG1083	cytidylyl-transferase
CLLT_RS06620	COG3980	spore coat polysaccharide biosynthesis protein
CLLT_RS06625	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLLT_RS06635	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CLLT_RS06645	COG0730	response to heat
CLLT_RS06650	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CLLT_RS06655	COG0840	transmembrane signaling receptor activity
CLLT_RS06660	COG0450	alkyl hydroperoxide reductase
CLLT_RS06670	COG0105	UTP biosynthetic process
CLLT_RS06680	COG0333	Belongs to the bacterial ribosomal protein bL32 family
CLLT_RS06685	COG0416	fatty acid biosynthetic process
CLLT_RS06695	COG1360	Flagellar Motor Protein
CLLT_RS06700	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CLLT_RS06710	COG0477	Major facilitator Superfamily
CLLT_RS06720	COG1238	metal cluster binding
CLLT_RS06725	COG0133	tryptophan synthase activity
CLLT_RS06735	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
CLLT_RS06740	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CLLT_RS06745	COG1966	Carbon starvation protein
CLLT_RS06755	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CLLT_RS06760	COG1570	exodeoxyribonuclease VII activity
CLLT_RS06765	COG2226	methyltransferase
CLLT_RS06780	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CLLT_RS06790	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CLLT_RS06800	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CLLT_RS06815	COG0019	diaminopimelate decarboxylase activity
CLLT_RS06825	COG0193	aminoacyl-tRNA hydrolase activity
CLLT_RS06830	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CLLT_RS06835	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLLT_RS06845	COG0835	chemotaxis
CLLT_RS06850	COG0784	Response regulator, receiver
CLLT_RS06850	COG0643	Histidine kinase
CLLT_RS06850	COG2198	Histidine kinase
CLLT_RS06855	COG0784	Response regulator, receiver
CLLT_RS06855	COG0835	chemotaxis
CLLT_RS06865	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CLLT_RS06870	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CLLT_RS06880	COG3021	interspecies interaction between organisms
CLLT_RS06890	COG2195	Cleaves the N-terminal amino acid of tripeptides
CLLT_RS06895	COG3069	C4-dicarboxylate transmembrane transporter activity
CLLT_RS06900	COG3340	Belongs to the peptidase S51 family
CLLT_RS06905	COG0725	ABC transporter, periplasmic molybdate-binding protein
CLLT_RS06910	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
CLLT_RS06930	COG4106	trans-aconitate 2-methyltransferase activity
CLLT_RS06935	COG2830	Protein of unknown function (DUF452)
CLLT_RS06945	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CLLT_RS06950	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CLLT_RS06955	COG2076	Multidrug Resistance protein
CLLT_RS06960	COG2076	Multidrug Resistance protein
CLLT_RS06970	COG1446	asparaginase
CLLT_RS06980	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CLLT_RS06990	COG1077	Cell shape determining protein MreB Mrl
CLLT_RS06995	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CLLT_RS07000	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CLLT_RS07005	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CLLT_RS07010	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CLLT_RS07015	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CLLT_RS07020	COG1942	4-Oxalocrotonate Tautomerase
CLLT_RS07030	COG0330	HflC and HflK could
CLLT_RS07045	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CLLT_RS07050	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
CLLT_RS07060	COG0492	ferredoxin-NADP+ reductase activity
CLLT_RS07065	COG3118	belongs to the thioredoxin family
CLLT_RS07070	COG0792	nuclease activity
CLLT_RS07075	COG0460	homoserine dehydrogenase
CLLT_RS07080	COG0436	Aminotransferase
CLLT_RS07100	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CLLT_RS07105	COG0254	rRNA binding
CLLT_RS07110	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CLLT_RS07130	COG0602	queuosine metabolic process
CLLT_RS07135	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
CLLT_RS07155	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CLLT_RS07165	COG1007	ATP synthesis coupled electron transport
CLLT_RS07170	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLLT_RS07175	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CLLT_RS07185	COG0839	Belongs to the complex I subunit 6 family
CLLT_RS07190	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLLT_RS07195	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
CLLT_RS07220	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLLT_RS07225	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLLT_RS07230	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLLT_RS07235	COG4608	Belongs to the ABC transporter superfamily
CLLT_RS07240	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLLT_RS07245	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLLT_RS07260	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CLLT_RS07270	COG1139	Iron-sulfur cluster binding protein
CLLT_RS07275	COG0247	lactate metabolic process
CLLT_RS07295	COG0827	DNA restriction-modification system
CLLT_RS07295	COG0732	type I restriction modification DNA specificity domain
CLLT_RS07350	COG0861	Integral membrane protein TerC family
CLLT_RS07355	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CLLT_RS07360	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLLT_RS07360	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CLLT_RS07375	COG0606	chelatase, subunit chli
CLLT_RS07380	COG0242	peptide deformylase activity
CLLT_RS07390	COG0740	serine-type endopeptidase activity
CLLT_RS07395	COG0544	peptidyl-prolyl cis-trans isomerase activity
CLLT_RS07400	COG0302	gtp cyclohydrolase
CLLT_RS07405	COG1157	protein secretion by the type III secretion system
CLLT_RS07435	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CLLT_RS07440	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CLLT_RS07450	COG2860	membrane
CLLT_RS07460	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CLLT_RS07470	COG0328	RNA-DNA hybrid ribonuclease activity
CLLT_RS07480	COG0358	DNA primase activity
CLLT_RS07490	COG0840	transmembrane signaling receptor activity
CLLT_RS07495	COG4953	penicillin-binding protein 1C
CLLT_RS07515	COG0668	transmembrane transport
CLLT_RS07520	COG0288	reversible hydration of carbon dioxide
CLLT_RS07525	COG0670	Belongs to the BI1 family
CLLT_RS07530	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CLLT_RS07535	COG0233	cytoplasmic translational termination
CLLT_RS07540	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLLT_RS07550	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLLT_RS07565	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
CLLT_RS07595	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
CLLT_RS07600	COG1749	Flagellar hook protein flgE
CLLT_RS07620	COG2184	nucleotidyltransferase activity
CLLT_RS07635	COG1840	ABC-type Fe3 transport system, periplasmic component
CLLT_RS07645	COG4615	Cyclic peptide transporter
CLLT_RS07685	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CLLT_RS07690	COG0575	Belongs to the CDS family
CLLT_RS07710	COG2056	Na+-H+ antiporter family
CLLT_RS07715	COG0129	dihydroxy-acid dehydratase activity
CLLT_RS07740	COG0840	transmembrane signaling receptor activity
CLLT_RS07745	COG0840	transmembrane signaling receptor activity
CLLT_RS07755	COG1222	aaa ATPase
CLLT_RS07765	COG1666	GTP binding
CLLT_RS07770	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLLT_RS07775	COG0754	glutathionylspermidine amidase activity
CLLT_RS07785	COG1280	lysine exporter protein (LysE YggA)
CLLT_RS07790	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CLLT_RS07825	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CLLT_RS07840	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CLLT_RS07850	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
CLLT_RS07850	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CLLT_RS07870	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group