locus-tag class description CMCT_RS00005 PF00308 Bacterial dnaA protein CMCT_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CMCT_RS00005 PF11638 DnaA N-terminal domain CMCT_RS00010 PF02767 DNA polymerase III beta subunit, central domain CMCT_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CMCT_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CMCT_RS00015 PF00204 DNA gyrase B CMCT_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMCT_RS00015 PF01751 Toprim domain CMCT_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CMCT_RS00025 PF14489 QueF-like protein CMCT_RS00070 PF02867 Ribonucleotide reductase, barrel domain CMCT_RS00070 PF00317 Ribonucleotide reductase, all-alpha domain CMCT_RS00070 PF03477 ATP cone domain CMCT_RS00080 PF01758 Sodium Bile acid symporter family CMCT_RS00090 PF02867 Ribonucleotide reductase, barrel domain CMCT_RS00090 PF00317 Ribonucleotide reductase, all-alpha domain CMCT_RS00090 PF03477 ATP cone domain CMCT_RS00095 PF02661 Fic/DOC family CMCT_RS00095 PF12728 Helix-turn-helix domain CMCT_RS00100 PF00206 Lyase CMCT_RS00100 PF10397 Adenylosuccinate lyase C-terminus CMCT_RS00105 PF00849 RNA pseudouridylate synthase CMCT_RS00110 PF02915 Rubrerythrin CMCT_RS00130 PF04055 Radical SAM superfamily CMCT_RS00150 PF00977 Histidine biosynthesis protein CMCT_RS00155 PF00398 Ribosomal RNA adenine dimethylase CMCT_RS00160 PF17770 Ribonuclease J C-terminal domain CMCT_RS00160 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CMCT_RS00160 PF00753 Metallo-beta-lactamase superfamily CMCT_RS00165 PF00571 CBS domain CMCT_RS00165 PF01380 SIS domain CMCT_RS00170 PF00849 RNA pseudouridylate synthase CMCT_RS00170 PF01479 S4 domain CMCT_RS00175 PF00731 AIR carboxylase CMCT_RS00180 PF02540 NAD synthase CMCT_RS00185 PF01969 Protein of unknown function DUF111 CMCT_RS00190 PF09861 Lactate racemase N-terminal domain CMCT_RS00195 PF03605 Anaerobic c4-dicarboxylate membrane transporter CMCT_RS00200 PF01235 Sodium:alanine symporter family CMCT_RS00205 PF06039 Malate:quinone oxidoreductase (Mqo) CMCT_RS00210 PF02743 Cache domain CMCT_RS00210 PF00672 HAMP domain CMCT_RS00210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS00215 PF01661 Macro domain CMCT_RS00215 PF16193 AAA C-terminal domain CMCT_RS00215 PF05496 Holliday junction DNA helicase RuvB P-loop domain CMCT_RS00215 PF12002 MgsA AAA+ ATPase C terminal CMCT_RS00235 PF00501 AMP-binding enzyme CMCT_RS00235 PF13193 AMP-binding enzyme C-terminal domain CMCT_RS00235 PF00668 Condensation domain CMCT_RS00235 PF00550 Phosphopantetheine attachment site CMCT_RS00235 PF00551 Formyl transferase CMCT_RS00245 PF03167 Uracil DNA glycosylase superfamily CMCT_RS00250 PF10415 Fumarase C C-terminus CMCT_RS00250 PF00206 Lyase CMCT_RS00255 PF03605 Anaerobic c4-dicarboxylate membrane transporter CMCT_RS00260 PF01678 Diaminopimelate epimerase CMCT_RS00265 PF01121 Dephospho-CoA kinase CMCT_RS00270 PF00586 AIR synthase related protein, N-terminal domain CMCT_RS00270 PF02769 AIR synthase related protein, C-terminal domain CMCT_RS00275 PF00672 HAMP domain CMCT_RS00275 PF17200 Single Cache domain 2 CMCT_RS00275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS00280 PF08447 PAS fold CMCT_RS00280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS00355 PF01351 Ribonuclease HII CMCT_RS00360 PF10442 FIST C domain CMCT_RS00360 PF08495 FIST N domain CMCT_RS00360 PF00563 EAL domain CMCT_RS00360 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS00370 PF00268 Ribonucleotide reductase, small chain CMCT_RS00375 PF13018 Extended Signal Peptide of Type V secretion system CMCT_RS00375 PF02661 Fic/DOC family CMCT_RS00375 PF13332 Hemagglutinin repeat CMCT_RS00375 PF05860 haemagglutination activity domain CMCT_RS00375 PF03543 Yersinia/Haemophilus virulence surface antigen CMCT_RS00400 PF00384 Molybdopterin oxidoreductase CMCT_RS00400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CMCT_RS00400 PF01568 Molydopterin dinucleotide binding domain CMCT_RS00405 PF09163 Formate dehydrogenase N, transmembrane CMCT_RS00405 PF13247 4Fe-4S dicluster domain CMCT_RS00415 PF03916 Polysulphide reductase, NrfD CMCT_RS00435 PF18364 Molybdopterin oxidoreductase N-terminal domain CMCT_RS00435 PF00384 Molybdopterin oxidoreductase CMCT_RS00435 PF01568 Molydopterin dinucleotide binding domain CMCT_RS00445 PF00707 Translation initiation factor IF-3, C-terminal domain CMCT_RS00445 PF05198 Translation initiation factor IF-3, N-terminal domain CMCT_RS00450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CMCT_RS00450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CMCT_RS00450 PF03129 Anticodon binding domain CMCT_RS00460 PF03741 Integral membrane protein TerC family CMCT_RS00495 PF04055 Radical SAM superfamily CMCT_RS00495 PF06463 Molybdenum Cofactor Synthesis C CMCT_RS00525 PF01197 Ribosomal protein L31 CMCT_RS00530 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CMCT_RS00535 PF08032 RNA 2'-O ribose methyltransferase substrate binding CMCT_RS00535 PF00588 SpoU rRNA Methylase family CMCT_RS00550 PF00155 Aminotransferase class I and II CMCT_RS00555 PF01842 ACT domain CMCT_RS00555 PF00742 Homoserine dehydrogenase CMCT_RS00555 PF03447 Homoserine dehydrogenase, NAD binding domain CMCT_RS00560 PF02021 Uncharacterised protein family UPF0102 CMCT_RS00565 PF00085 Thioredoxin CMCT_RS00575 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMCT_RS00580 PF02677 Epoxyqueuosine reductase QueH CMCT_RS00595 PF01040 UbiA prenyltransferase family CMCT_RS00615 PF01361 Tautomerase enzyme CMCT_RS00620 PF00578 AhpC/TSA family CMCT_RS00625 PF00884 Sulfatase CMCT_RS00630 PF01063 Amino-transferase class IV CMCT_RS00640 PF01502 Phosphoribosyl-AMP cyclohydrolase CMCT_RS00640 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CMCT_RS00660 PF05173 Dihydrodipicolinate reductase, C-terminus CMCT_RS00660 PF01113 Dihydrodipicolinate reductase, N-terminus CMCT_RS00665 PF00156 Phosphoribosyl transferase domain CMCT_RS00675 PF00005 ABC transporter CMCT_RS00695 PF02321 Outer membrane efflux protein CMCT_RS00700 PF00873 AcrB/AcrD/AcrF family CMCT_RS00705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CMCT_RS00705 PF00529 HlyD membrane-fusion protein of T1SS CMCT_RS00710 PF18665 Tetracyclin repressor-like, C-terminal domain CMCT_RS00710 PF00440 Bacterial regulatory proteins, tetR family CMCT_RS00720 PF01165 Ribosomal protein S21 CMCT_RS00735 PF03738 Glutathionylspermidine synthase preATP-grasp CMCT_RS00740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CMCT_RS00740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CMCT_RS00745 PF04461 Protein of unknown function (DUF520) CMCT_RS00750 PF04055 Radical SAM superfamily CMCT_RS00750 PF06969 HemN C-terminal domain CMCT_RS00765 PF00899 ThiF family CMCT_RS00770 PF01975 Survival protein SurE CMCT_RS00780 PF00202 Aminotransferase class-III CMCT_RS00785 PF00854 POT family CMCT_RS00790 PF02684 Lipid-A-disaccharide synthetase CMCT_RS00795 PF01272 Transcription elongation factor, GreA/GreB, C-term CMCT_RS00795 PF03449 Transcription elongation factor, N-terminal CMCT_RS00800 PF02774 Semialdehyde dehydrogenase, dimerisation domain CMCT_RS00800 PF01118 Semialdehyde dehydrogenase, NAD binding domain CMCT_RS00810 PF01584 CheW-like domain CMCT_RS00810 PF00072 Response regulator receiver domain CMCT_RS00815 PF02895 Signal transducing histidine kinase, homodimeric domain CMCT_RS00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMCT_RS00815 PF01584 CheW-like domain CMCT_RS00815 PF00072 Response regulator receiver domain CMCT_RS00815 PF01627 Hpt domain CMCT_RS00820 PF01584 CheW-like domain CMCT_RS00830 PF00923 Transaldolase/Fructose-6-phosphate aldolase CMCT_RS00835 PF01386 Ribosomal L25p family CMCT_RS00835 PF14693 Ribosomal protein TL5, C-terminal domain CMCT_RS00840 PF01195 Peptidyl-tRNA hydrolase CMCT_RS00850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CMCT_RS00850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CMCT_RS00855 PF00800 Prephenate dehydratase CMCT_RS00855 PF01817 Chorismate mutase type II CMCT_RS00855 PF01842 ACT domain CMCT_RS00860 PF00155 Aminotransferase class I and II CMCT_RS00865 PF08345 Flagellar M-ring protein C-terminal CMCT_RS00865 PF01514 Secretory protein of YscJ/FliF family CMCT_RS00870 PF14842 FliG N-terminal domain CMCT_RS00870 PF14841 FliG middle domain CMCT_RS00870 PF01706 FliG C-terminal domain CMCT_RS00880 PF02779 Transketolase, pyrimidine binding domain CMCT_RS00880 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CMCT_RS00880 PF02780 Transketolase, C-terminal domain CMCT_RS00895 PF01209 ubiE/COQ5 methyltransferase family CMCT_RS00900 PF13742 OB-fold nucleic acid binding domain CMCT_RS00900 PF02601 Exonuclease VII, large subunit CMCT_RS00905 PF00145 C-5 cytosine-specific DNA methylase CMCT_RS00910 PF09556 HaeIII restriction endonuclease CMCT_RS00915 PF00266 Aminotransferase class-V CMCT_RS00930 PF00459 Inositol monophosphatase family CMCT_RS00935 PF00285 Citrate synthase, C-terminal domain CMCT_RS00940 PF02254 TrkA-N domain CMCT_RS00940 PF02080 TrkA-C domain CMCT_RS00940 PF00999 Sodium/hydrogen exchanger family CMCT_RS00945 PF10119 Predicted methyltransferase regulatory domain CMCT_RS00945 PF13847 Methyltransferase domain CMCT_RS00950 PF02621 Menaquinone biosynthesis CMCT_RS00960 PF02348 Cytidylyltransferase CMCT_RS00975 PF00483 Nucleotidyl transferase CMCT_RS00985 PF00551 Formyl transferase CMCT_RS00985 PF02911 Formyl transferase, C-terminal domain CMCT_RS00985 PF01370 NAD dependent epimerase/dehydratase family CMCT_RS00990 PF02350 UDP-N-acetylglucosamine 2-epimerase CMCT_RS00995 PF03102 NeuB family CMCT_RS00995 PF08666 SAF domain CMCT_RS01005 PF00551 Formyl transferase CMCT_RS01005 PF02911 Formyl transferase, C-terminal domain CMCT_RS01010 PF00551 Formyl transferase CMCT_RS01010 PF02911 Formyl transferase, C-terminal domain CMCT_RS01020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CMCT_RS01025 PF02719 Polysaccharide biosynthesis protein CMCT_RS01040 PF00669 Bacterial flagellin N-terminal helical region CMCT_RS01040 PF07196 Flagellin hook IN motif CMCT_RS01040 PF00700 Bacterial flagellin C-terminal helical region CMCT_RS01065 PF02719 Polysaccharide biosynthesis protein CMCT_RS01070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CMCT_RS01075 PF02348 Cytidylyltransferase CMCT_RS01080 PF13302 Acetyltransferase (GNAT) domain CMCT_RS01085 PF02447 GntP family permease CMCT_RS01090 PF02595 Glycerate kinase family CMCT_RS01095 PF00814 Glycoprotease family CMCT_RS01105 PF00860 Permease family CMCT_RS01110 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CMCT_RS01110 PF13288 DXP reductoisomerase C-terminal domain CMCT_RS01110 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CMCT_RS01125 PF05670 NFACT protein RNA binding domain CMCT_RS01130 PF00593 TonB dependent receptor CMCT_RS01135 PF00330 Aconitase family (aconitate hydratase) CMCT_RS01140 PF12804 MobA-like NTP transferase domain CMCT_RS01145 PF02253 Phospholipase A1 CMCT_RS01155 PF00289 Biotin carboxylase, N-terminal domain CMCT_RS01155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CMCT_RS01155 PF02785 Biotin carboxylase C-terminal domain CMCT_RS01160 PF00364 Biotin-requiring enzyme CMCT_RS01170 PF18364 Molybdopterin oxidoreductase N-terminal domain CMCT_RS01170 PF00384 Molybdopterin oxidoreductase CMCT_RS01170 PF01568 Molydopterin dinucleotide binding domain CMCT_RS01175 PF00692 dUTPase CMCT_RS01210 PF09335 SNARE associated Golgi protein CMCT_RS01215 PF09335 SNARE associated Golgi protein CMCT_RS01255 PF03372 Endonuclease/Exonuclease/phosphatase family CMCT_RS01265 PF00672 HAMP domain CMCT_RS01265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMCT_RS01265 PF00512 His Kinase A (phospho-acceptor) domain CMCT_RS01270 PF00072 Response regulator receiver domain CMCT_RS01270 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS01285 PF00534 Glycosyl transferases group 1 CMCT_RS01285 PF13439 Glycosyltransferase Family 4 CMCT_RS01295 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS01300 PF00005 ABC transporter CMCT_RS01300 PF08402 TOBE domain CMCT_RS01315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CMCT_RS01315 PF03459 TOBE domain CMCT_RS01345 PF01313 Bacterial export proteins, family 3 CMCT_RS01350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CMCT_RS01360 PF00154 recA bacterial DNA recombination protein CMCT_RS01365 PF00113 Enolase, C-terminal TIM barrel domain CMCT_RS01365 PF03952 Enolase, N-terminal domain CMCT_RS01405 PF13635 Domain of unknown function (DUF4143) CMCT_RS01405 PF13173 AAA domain CMCT_RS01415 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS01415 PF00072 Response regulator receiver domain CMCT_RS01435 PF04205 FMN-binding domain CMCT_RS01435 PF00890 FAD binding domain CMCT_RS01445 PF00221 Aromatic amino acid lyase CMCT_RS01465 PF13439 Glycosyltransferase Family 4 CMCT_RS01465 PF00534 Glycosyl transferases group 1 CMCT_RS01470 PF01522 Polysaccharide deacetylase CMCT_RS01475 PF00535 Glycosyl transferase family 2 CMCT_RS01475 PF01501 Glycosyl transferase family 8 CMCT_RS01490 PF13439 Glycosyltransferase Family 4 CMCT_RS01490 PF00534 Glycosyl transferases group 1 CMCT_RS01500 PF00535 Glycosyl transferase family 2 CMCT_RS01510 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CMCT_RS01520 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CMCT_RS01535 PF01370 NAD dependent epimerase/dehydratase family CMCT_RS01540 PF14743 DNA ligase OB-like domain CMCT_RS01540 PF01068 ATP dependent DNA ligase domain CMCT_RS01545 PF01370 NAD dependent epimerase/dehydratase family CMCT_RS01550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CMCT_RS01550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CMCT_RS01550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CMCT_RS01555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CMCT_RS01555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CMCT_RS01555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CMCT_RS01560 PF14667 Polysaccharide biosynthesis C-terminal domain CMCT_RS01560 PF01943 Polysaccharide biosynthesis protein CMCT_RS01570 PF00535 Glycosyl transferase family 2 CMCT_RS01575 PF13439 Glycosyltransferase Family 4 CMCT_RS01575 PF00534 Glycosyl transferases group 1 CMCT_RS01585 PF13439 Glycosyltransferase Family 4 CMCT_RS01585 PF00534 Glycosyl transferases group 1 CMCT_RS01595 PF02516 Oligosaccharyl transferase STT3 subunit CMCT_RS01595 PF18527 STT3/PglB C-terminal beta-barrel domain CMCT_RS01600 PF00534 Glycosyl transferases group 1 CMCT_RS01600 PF13477 Glycosyl transferase 4-like CMCT_RS01605 PF02397 Bacterial sugar transferase CMCT_RS01610 PF00132 Bacterial transferase hexapeptide (six repeats) CMCT_RS01610 PF17836 PglD N-terminal domain CMCT_RS01615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CMCT_RS01620 PF02719 Polysaccharide biosynthesis protein CMCT_RS01630 PF00117 Glutamine amidotransferase class-I CMCT_RS01635 PF00977 Histidine biosynthesis protein CMCT_RS01645 PF00072 Response regulator receiver domain CMCT_RS01655 PF01434 Peptidase family M41 CMCT_RS01655 PF17862 AAA+ lid domain CMCT_RS01655 PF00004 ATPase family associated with various cellular activities (AAA) CMCT_RS01665 PF01066 CDP-alcohol phosphatidyltransferase CMCT_RS01670 PF08502 LeuA allosteric (dimerisation) domain CMCT_RS01670 PF00682 HMGL-like CMCT_RS01680 PF05167 Uncharacterised ACR (DUF711) CMCT_RS01685 PF13932 GidA associated domain CMCT_RS01685 PF01134 Glucose inhibited division protein A CMCT_RS01690 PF03480 Bacterial extracellular solute-binding protein, family 7 CMCT_RS01695 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CMCT_RS01700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CMCT_RS01720 PF03707 Bacterial signalling protein N terminal repeat CMCT_RS01720 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS01720 PF00563 EAL domain CMCT_RS01725 PF13393 Histidyl-tRNA synthetase CMCT_RS01730 PF00709 Adenylosuccinate synthetase CMCT_RS01750 PF00117 Glutamine amidotransferase class-I CMCT_RS01750 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CMCT_RS01760 PF08447 PAS fold CMCT_RS01760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMCT_RS01760 PF08448 PAS fold CMCT_RS01765 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS01765 PF00072 Response regulator receiver domain CMCT_RS01770 PF00115 Cytochrome C and Quinol oxidase polypeptide I CMCT_RS01785 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CMCT_RS01785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CMCT_RS01810 PF12705 PD-(D/E)XK nuclease superfamily CMCT_RS01810 PF13361 UvrD-like helicase C-terminal domain CMCT_RS01810 PF00580 UvrD/REP helicase N-terminal domain CMCT_RS01810 PF12705 PD-(D/E)XK nuclease superfamily CMCT_RS01810 PF13361 UvrD-like helicase C-terminal domain CMCT_RS01810 PF00580 UvrD/REP helicase N-terminal domain CMCT_RS01815 PF00572 Ribosomal protein L13 CMCT_RS01820 PF00380 Ribosomal protein S9/S16 CMCT_RS01825 PF00691 OmpA family CMCT_RS01825 PF05736 OprF membrane domain CMCT_RS01830 PF13419 Haloacid dehalogenase-like hydrolase CMCT_RS01835 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CMCT_RS01835 PF10371 Domain of unknown function CMCT_RS01835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CMCT_RS01835 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CMCT_RS01835 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CMCT_RS01840 PF00474 Sodium:solute symporter family CMCT_RS01845 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS01850 PF00005 ABC transporter CMCT_RS01855 PF00497 Bacterial extracellular solute-binding proteins, family 3 CMCT_RS01860 PF08543 Phosphomethylpyrimidine kinase CMCT_RS01865 PF02581 Thiamine monophosphate synthase CMCT_RS01870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS01870 PF00672 HAMP domain CMCT_RS01870 PF02743 Cache domain CMCT_RS01875 PF00342 Phosphoglucose isomerase CMCT_RS01880 PF00483 Nucleotidyl transferase CMCT_RS01885 PF00005 ABC transporter CMCT_RS01890 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS01895 PF12849 PBP superfamily domain CMCT_RS01900 PF09186 Domain of unknown function (DUF1949) CMCT_RS01900 PF01205 Uncharacterized protein family UPF0029 CMCT_RS01905 PF04073 Aminoacyl-tRNA editing domain CMCT_RS01915 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS01915 PF00072 Response regulator receiver domain CMCT_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMCT_RS01925 PF01790 Prolipoprotein diacylglyceryl transferase CMCT_RS01930 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CMCT_RS01935 PF02910 Fumarate reductase flavoprotein C-term CMCT_RS01935 PF00890 FAD binding domain CMCT_RS01940 PF13183 4Fe-4S dicluster domain CMCT_RS01940 PF13085 2Fe-2S iron-sulfur cluster binding domain CMCT_RS01950 PF04264 YceI-like domain CMCT_RS01955 PF00350 Dynamin family CMCT_RS01960 PF01926 50S ribosome-binding GTPase CMCT_RS01960 PF12631 MnmE helical domain CMCT_RS01960 PF10396 GTP-binding protein TrmE N-terminus CMCT_RS01965 PF00258 Flavodoxin CMCT_RS01980 PF03544 Gram-negative bacterial TonB protein C-terminal CMCT_RS01985 PF02472 Biopolymer transport protein ExbD/TolR CMCT_RS01990 PF01618 MotA/TolQ/ExbB proton channel family CMCT_RS01995 PF02082 Transcriptional regulator CMCT_RS02000 PF13460 NAD(P)H-binding CMCT_RS02010 PF16916 Dimerisation domain of Zinc Transporter CMCT_RS02010 PF01545 Cation efflux family CMCT_RS02020 PF00009 Elongation factor Tu GTP binding domain CMCT_RS02020 PF00679 Elongation factor G C-terminus CMCT_RS02020 PF06421 GTP-binding protein LepA C-terminus CMCT_RS02020 PF03144 Elongation factor Tu domain 2 CMCT_RS02025 PF16254 Domain of unknown function (DUF4910) CMCT_RS02025 PF09940 Domain of unknown function (DUF2172) CMCT_RS02025 PF16221 winged helix-turn-helix CMCT_RS02030 PF13193 AMP-binding enzyme C-terminal domain CMCT_RS02030 PF00501 AMP-binding enzyme CMCT_RS02040 PF00551 Formyl transferase CMCT_RS02055 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CMCT_RS02055 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CMCT_RS02060 PF01361 Tautomerase enzyme CMCT_RS02075 PF00156 Phosphoribosyl transferase domain CMCT_RS02080 PF03989 DNA gyrase C-terminal domain, beta-propeller CMCT_RS02080 PF00521 DNA gyrase/topoisomerase IV, subunit A CMCT_RS02095 PF00072 Response regulator receiver domain CMCT_RS02095 PF00158 Sigma-54 interaction domain CMCT_RS02100 PF02774 Semialdehyde dehydrogenase, dimerisation domain CMCT_RS02100 PF01118 Semialdehyde dehydrogenase, NAD binding domain CMCT_RS02110 PF04055 Radical SAM superfamily CMCT_RS02115 PF01208 Uroporphyrinogen decarboxylase (URO-D) CMCT_RS02135 PF02151 UvrB/uvrC motif CMCT_RS02135 PF08459 UvrC Helix-hairpin-helix N-terminal CMCT_RS02135 PF01541 GIY-YIG catalytic domain CMCT_RS02150 PF03600 Citrate transporter CMCT_RS02155 PF00117 Glutamine amidotransferase class-I CMCT_RS02155 PF00958 GMP synthase C terminal domain CMCT_RS02155 PF02540 NAD synthase CMCT_RS02160 PF00684 DnaJ central domain CMCT_RS02160 PF01556 DnaJ C terminal domain CMCT_RS02160 PF00226 DnaJ domain CMCT_RS02165 PF01435 Peptidase family M48 CMCT_RS02180 PF02527 rRNA small subunit methyltransferase G CMCT_RS02185 PF00925 GTP cyclohydrolase II CMCT_RS02190 PF00490 Delta-aminolevulinic acid dehydratase CMCT_RS02205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CMCT_RS02205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CMCT_RS02220 PF10788 Protein of unknown function (DUF2603) CMCT_RS02225 PF06969 HemN C-terminal domain CMCT_RS02225 PF04055 Radical SAM superfamily CMCT_RS02240 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS02240 PF00563 EAL domain CMCT_RS02240 PF03707 Bacterial signalling protein N terminal repeat CMCT_RS02245 PF00664 ABC transporter transmembrane region CMCT_RS02245 PF00005 ABC transporter CMCT_RS02245 PF03412 Peptidase C39 family CMCT_RS02260 PF00072 Response regulator receiver domain CMCT_RS02260 PF00196 Bacterial regulatory proteins, luxR family CMCT_RS02295 PF00009 Elongation factor Tu GTP binding domain CMCT_RS02295 PF03144 Elongation factor Tu domain 2 CMCT_RS02295 PF03143 Elongation factor Tu C-terminal domain CMCT_RS02300 PF00471 Ribosomal protein L33 CMCT_RS02315 PF02357 Transcription termination factor nusG CMCT_RS02320 PF00298 Ribosomal protein L11, RNA binding domain CMCT_RS02320 PF03946 Ribosomal protein L11, N-terminal domain CMCT_RS02325 PF00687 Ribosomal protein L1p/L10e family CMCT_RS02330 PF00466 Ribosomal protein L10 CMCT_RS02335 PF00542 Ribosomal protein L7/L12 C-terminal domain CMCT_RS02335 PF16320 Ribosomal protein L7/L12 dimerisation domain CMCT_RS02340 PF04561 RNA polymerase Rpb2, domain 2 CMCT_RS02340 PF04560 RNA polymerase Rpb2, domain 7 CMCT_RS02340 PF04565 RNA polymerase Rpb2, domain 3 CMCT_RS02340 PF10385 RNA polymerase beta subunit external 1 domain CMCT_RS02340 PF00562 RNA polymerase Rpb2, domain 6 CMCT_RS02340 PF04563 RNA polymerase beta subunit CMCT_RS02345 PF05000 RNA polymerase Rpb1, domain 4 CMCT_RS02345 PF04983 RNA polymerase Rpb1, domain 3 CMCT_RS02345 PF04998 RNA polymerase Rpb1, domain 5 CMCT_RS02345 PF00623 RNA polymerase Rpb1, domain 2 CMCT_RS02345 PF04997 RNA polymerase Rpb1, domain 1 CMCT_RS02355 PF03553 Na+/H+ antiporter family CMCT_RS02360 PF01979 Amidohydrolase family CMCT_RS02365 PF00164 Ribosomal protein S12/S23 CMCT_RS02370 PF00177 Ribosomal protein S7p/S5e CMCT_RS02375 PF00679 Elongation factor G C-terminus CMCT_RS02375 PF03764 Elongation factor G, domain IV CMCT_RS02375 PF00009 Elongation factor Tu GTP binding domain CMCT_RS02375 PF03144 Elongation factor Tu domain 2 CMCT_RS02375 PF14492 Elongation Factor G, domain II CMCT_RS02390 PF00881 Nitroreductase family CMCT_RS02400 PF00994 Probable molybdopterin binding domain CMCT_RS02400 PF18146 Damage-inducible protein CinA KH domain CMCT_RS02400 PF02464 Competence-damaged protein CMCT_RS02405 PF08264 Anticodon-binding domain of tRNA CMCT_RS02405 PF00133 tRNA synthetases class I (I, L, M and V) CMCT_RS02410 PF01425 Amidase CMCT_RS02415 PF00478 IMP dehydrogenase / GMP reductase domain CMCT_RS02415 PF00571 CBS domain CMCT_RS02420 PF00561 alpha/beta hydrolase fold CMCT_RS02425 PF02609 Exonuclease VII small subunit CMCT_RS02435 PF13302 Acetyltransferase (GNAT) domain CMCT_RS02435 PF13673 Acetyltransferase (GNAT) domain CMCT_RS02435 PF03352 Methyladenine glycosylase CMCT_RS02435 PF00958 GMP synthase C terminal domain CMCT_RS02435 PF00117 Glutamine amidotransferase class-I CMCT_RS02440 PF08245 Mur ligase middle domain CMCT_RS02440 PF01225 Mur ligase family, catalytic domain CMCT_RS02440 PF02875 Mur ligase family, glutamate ligase domain CMCT_RS02450 PF00488 MutS domain V CMCT_RS02450 PF01713 Smr domain CMCT_RS02455 PF00563 EAL domain CMCT_RS02455 PF08495 FIST N domain CMCT_RS02455 PF10442 FIST C domain CMCT_RS02455 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS02460 PF07687 Peptidase dimerisation domain CMCT_RS02460 PF01546 Peptidase family M20/M25/M40 CMCT_RS02465 PF03480 Bacterial extracellular solute-binding protein, family 7 CMCT_RS02470 PF00391 PEP-utilising enzyme, mobile domain CMCT_RS02470 PF00224 Pyruvate kinase, barrel domain CMCT_RS02470 PF02887 Pyruvate kinase, alpha/beta domain CMCT_RS02475 PF01634 ATP phosphoribosyltransferase CMCT_RS02480 PF03309 Type III pantothenate kinase CMCT_RS02490 PF15437 Plasminogen-binding protein pgbA C-terminal CMCT_RS02500 PF02686 Glu-tRNAGln amidotransferase C subunit CMCT_RS02505 PF00437 Type II/IV secretion system protein CMCT_RS02515 PF01475 Ferric uptake regulator family CMCT_RS02520 PF00152 tRNA synthetases class II (D, K and N) CMCT_RS02520 PF01336 OB-fold nucleic acid binding domain CMCT_RS02525 PF00464 Serine hydroxymethyltransferase CMCT_RS02540 PF08501 Shikimate dehydrogenase substrate binding domain CMCT_RS02545 PF10518 TAT (twin-arginine translocation) pathway signal sequence CMCT_RS02545 PF01568 Molydopterin dinucleotide binding domain CMCT_RS02545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CMCT_RS02545 PF00384 Molybdopterin oxidoreductase CMCT_RS02550 PF13247 4Fe-4S dicluster domain CMCT_RS02555 PF03916 Polysulphide reductase, NrfD CMCT_RS02560 PF00072 Response regulator receiver domain CMCT_RS02560 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS02565 PF00512 His Kinase A (phospho-acceptor) domain CMCT_RS02565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMCT_RS02580 PF01568 Molydopterin dinucleotide binding domain CMCT_RS02580 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CMCT_RS02580 PF00384 Molybdopterin oxidoreductase CMCT_RS02585 PF12838 4Fe-4S dicluster domain CMCT_RS02585 PF12800 4Fe-4S binding domain CMCT_RS02590 PF12801 4Fe-4S binding domain CMCT_RS02590 PF12837 4Fe-4S binding domain CMCT_RS02595 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CMCT_RS02615 PF00210 Ferritin-like domain CMCT_RS02620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMCT_RS02620 PF00512 His Kinase A (phospho-acceptor) domain CMCT_RS02650 PF05538 Campylobacter major outer membrane protein CMCT_RS02705 PF03831 PhnA domain CMCT_RS02705 PF08274 PhnA Zinc-Ribbon CMCT_RS02715 PF00719 Inorganic pyrophosphatase CMCT_RS02725 PF02938 GAD domain CMCT_RS02725 PF01336 OB-fold nucleic acid binding domain CMCT_RS02725 PF00152 tRNA synthetases class II (D, K and N) CMCT_RS02730 PF01513 ATP-NAD kinase CMCT_RS02735 PF13476 AAA domain CMCT_RS02740 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS02740 PF00072 Response regulator receiver domain CMCT_RS02745 PF01026 TatD related DNase CMCT_RS02750 PF01476 LysM domain CMCT_RS02750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CMCT_RS02755 PF03330 Lytic transglycolase CMCT_RS02755 PF05036 Sporulation related domain CMCT_RS02760 PF00475 Imidazoleglycerol-phosphate dehydratase CMCT_RS02780 PF01926 50S ribosome-binding GTPase CMCT_RS02795 PF03717 Penicillin-binding Protein dimerisation domain CMCT_RS02795 PF00905 Penicillin binding protein transpeptidase domain CMCT_RS02800 PF02130 Uncharacterized protein family UPF0054 CMCT_RS02805 PF06508 Queuosine biosynthesis protein QueC CMCT_RS02815 PF03063 Prismane/CO dehydrogenase family CMCT_RS02845 PF01588 Putative tRNA binding domain CMCT_RS02845 PF00133 tRNA synthetases class I (I, L, M and V) CMCT_RS02845 PF09334 tRNA synthetases class I (M) CMCT_RS02855 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CMCT_RS02880 PF00749 tRNA synthetases class I (E and Q), catalytic domain CMCT_RS02885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS02885 PF00672 HAMP domain CMCT_RS02885 PF16591 Helical bimodular sensor domain CMCT_RS02890 PF01741 Large-conductance mechanosensitive channel, MscL CMCT_RS02910 PF00149 Calcineurin-like phosphoesterase CMCT_RS02915 PF02666 Phosphatidylserine decarboxylase CMCT_RS02935 PF12848 ABC transporter CMCT_RS02935 PF00005 ABC transporter CMCT_RS02940 PF16254 Domain of unknown function (DUF4910) CMCT_RS02940 PF09940 Domain of unknown function (DUF2172) CMCT_RS02940 PF16221 winged helix-turn-helix CMCT_RS02950 PF00668 Condensation domain CMCT_RS02950 PF00550 Phosphopantetheine attachment site CMCT_RS02950 PF13193 AMP-binding enzyme C-terminal domain CMCT_RS02950 PF00501 AMP-binding enzyme CMCT_RS02975 PF00083 Sugar (and other) transporter CMCT_RS02980 PF00072 Response regulator receiver domain CMCT_RS02980 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS02990 PF02132 RecR protein CMCT_RS02990 PF13662 Toprim domain CMCT_RS03000 PF00137 ATP synthase subunit C CMCT_RS03005 PF00209 Sodium:neurotransmitter symporter family CMCT_RS03010 PF00209 Sodium:neurotransmitter symporter family CMCT_RS03015 PF00209 Sodium:neurotransmitter symporter family CMCT_RS03025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CMCT_RS03030 PF00682 HMGL-like CMCT_RS03030 PF02436 Conserved carboxylase domain CMCT_RS03030 PF00364 Biotin-requiring enzyme CMCT_RS03035 PF01293 Phosphoenolpyruvate carboxykinase CMCT_RS03040 PF13687 Domain of unknown function (DUF4153) CMCT_RS03045 PF02630 SCO1/SenC CMCT_RS03070 PF01168 Alanine racemase, N-terminal domain CMCT_RS03070 PF00842 Alanine racemase, C-terminal domain CMCT_RS03100 PF01747 ATP-sulfurylase CMCT_RS03100 PF14306 PUA-like domain CMCT_RS03105 PF00072 Response regulator receiver domain CMCT_RS03105 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS03110 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CMCT_RS03110 PF02542 YgbB family CMCT_RS03115 PF10609 NUBPL iron-transfer P-loop NTPase CMCT_RS03115 PF01883 Iron-sulfur cluster assembly protein CMCT_RS03135 PF01641 SelR domain CMCT_RS03135 PF01625 Peptide methionine sulfoxide reductase CMCT_RS03145 PF01380 SIS domain CMCT_RS03150 PF08335 GlnD PII-uridylyltransferase CMCT_RS03150 PF01966 HD domain CMCT_RS03150 PF03445 Putative nucleotidyltransferase DUF294 CMCT_RS03155 PF04055 Radical SAM superfamily CMCT_RS03160 PF00860 Permease family CMCT_RS03205 PF13580 SIS domain CMCT_RS03210 PF01467 Cytidylyltransferase-like CMCT_RS03210 PF00294 pfkB family carbohydrate kinase CMCT_RS03215 PF01370 NAD dependent epimerase/dehydratase family CMCT_RS03220 PF08645 Polynucleotide kinase 3 phosphatase CMCT_RS03225 PF00034 Cytochrome c CMCT_RS03230 PF00375 Sodium:dicarboxylate symporter family CMCT_RS03240 PF02254 TrkA-N domain CMCT_RS03240 PF00999 Sodium/hydrogen exchanger family CMCT_RS03245 PF13411 MerR HTH family regulatory protein CMCT_RS03250 PF00684 DnaJ central domain CMCT_RS03250 PF00226 DnaJ domain CMCT_RS03250 PF01556 DnaJ C terminal domain CMCT_RS03270 PF17820 PDZ domain CMCT_RS03270 PF13180 PDZ domain CMCT_RS03275 PF03473 MOSC domain CMCT_RS03275 PF03475 3-alpha domain CMCT_RS03280 PF00999 Sodium/hydrogen exchanger family CMCT_RS03280 PF02080 TrkA-C domain CMCT_RS03280 PF03471 Transporter associated domain CMCT_RS03295 PF00072 Response regulator receiver domain CMCT_RS03295 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS03300 PF01053 Cys/Met metabolism PLP-dependent enzyme CMCT_RS03310 PF13419 Haloacid dehalogenase-like hydrolase CMCT_RS03325 PF00348 Polyprenyl synthetase CMCT_RS03330 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CMCT_RS03330 PF01488 Shikimate / quinate 5-dehydrogenase CMCT_RS03330 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CMCT_RS03335 PF03129 Anticodon binding domain CMCT_RS03335 PF04073 Aminoacyl-tRNA editing domain CMCT_RS03335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CMCT_RS03350 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CMCT_RS03350 PF03900 Porphobilinogen deaminase, C-terminal domain CMCT_RS03355 PF03748 Flagellar basal body-associated protein FliL CMCT_RS03360 PF01648 4'-phosphopantetheinyl transferase superfamily CMCT_RS03380 PF01025 GrpE CMCT_RS03385 PF00012 Hsp70 protein CMCT_RS03390 PF02683 Cytochrome C biogenesis protein transmembrane region CMCT_RS03390 PF11412 Disulphide bond corrector protein DsbC CMCT_RS03395 PF03976 Polyphosphate kinase 2 (PPK2) CMCT_RS03400 PF09335 SNARE associated Golgi protein CMCT_RS03405 PF01810 LysE type translocator CMCT_RS03420 PF03180 NLPA lipoprotein CMCT_RS03455 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS03460 PF09383 NIL domain CMCT_RS03460 PF00005 ABC transporter CMCT_RS03465 PF08264 Anticodon-binding domain of tRNA CMCT_RS03465 PF00133 tRNA synthetases class I (I, L, M and V) CMCT_RS03465 PF10458 Valyl tRNA synthetase tRNA binding arm CMCT_RS03475 PF06832 Penicillin-Binding Protein C-terminus Family CMCT_RS03475 PF00912 Transglycosylase CMCT_RS03475 PF00905 Penicillin binding protein transpeptidase domain CMCT_RS03480 PF13361 UvrD-like helicase C-terminal domain CMCT_RS03480 PF00580 UvrD/REP helicase N-terminal domain CMCT_RS03505 PF00216 Bacterial DNA-binding protein CMCT_RS03510 PF03883 Peroxide stress protein YaaA CMCT_RS03515 PF00700 Bacterial flagellin C-terminal helical region CMCT_RS03515 PF00669 Bacterial flagellin N-terminal helical region CMCT_RS03520 PF17854 FtsK alpha domain CMCT_RS03520 PF09397 Ftsk gamma domain CMCT_RS03520 PF01580 FtsK/SpoIIIE family CMCT_RS03535 PF10615 Protein of unknown function (DUF2470) CMCT_RS03535 PF01243 Pyridoxamine 5'-phosphate oxidase CMCT_RS03540 PF00669 Bacterial flagellin N-terminal helical region CMCT_RS03545 PF00815 Histidinol dehydrogenase CMCT_RS03565 PF01116 Fructose-bisphosphate aldolase class-II CMCT_RS03575 PF00730 HhH-GPD superfamily base excision DNA repair protein CMCT_RS03575 PF00633 Helix-hairpin-helix motif CMCT_RS03575 PF10576 Iron-sulfur binding domain of endonuclease III CMCT_RS03585 PF02348 Cytidylyltransferase CMCT_RS03590 PF00291 Pyridoxal-phosphate dependent enzyme CMCT_RS03595 PF00696 Amino acid kinase family CMCT_RS03600 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CMCT_RS03610 PF02540 NAD synthase CMCT_RS03615 PF00753 Metallo-beta-lactamase superfamily CMCT_RS03625 PF03061 Thioesterase superfamily CMCT_RS03625 PF01008 Initiation factor 2 subunit family CMCT_RS03630 PF08003 Protein of unknown function (DUF1698) CMCT_RS03640 PF01841 Transglutaminase-like superfamily CMCT_RS03655 PF07687 Peptidase dimerisation domain CMCT_RS03655 PF01546 Peptidase family M20/M25/M40 CMCT_RS03660 PF00140 Sigma-70 factor, region 1.2 CMCT_RS03660 PF04542 Sigma-70 region 2 CMCT_RS03660 PF04545 Sigma-70, region 4 CMCT_RS03660 PF04539 Sigma-70 region 3 CMCT_RS03665 PF04886 PT repeat CMCT_RS03665 PF07715 TonB-dependent Receptor Plug Domain CMCT_RS03665 PF00593 TonB dependent receptor CMCT_RS03670 PF00460 Flagella basal body rod protein CMCT_RS03670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CMCT_RS03675 PF00460 Flagella basal body rod protein CMCT_RS03675 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CMCT_RS03690 PF03591 AzlC protein CMCT_RS03695 PF05437 Branched-chain amino acid transport protein (AzlD) CMCT_RS03700 PF17763 Glutaminase/Asparaginase C-terminal domain CMCT_RS03700 PF00710 Asparaginase, N-terminal CMCT_RS03705 PF04886 PT repeat CMCT_RS03705 PF07715 TonB-dependent Receptor Plug Domain CMCT_RS03705 PF00593 TonB dependent receptor CMCT_RS03715 PF00694 Aconitase C-terminal domain CMCT_RS03720 PF00180 Isocitrate/isopropylmalate dehydrogenase CMCT_RS03740 PF00588 SpoU rRNA Methylase family CMCT_RS03755 PF02092 Glycyl-tRNA synthetase beta subunit CMCT_RS03805 PF01568 Molydopterin dinucleotide binding domain CMCT_RS03805 PF00384 Molybdopterin oxidoreductase CMCT_RS03805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CMCT_RS03810 PF01568 Molydopterin dinucleotide binding domain CMCT_RS03810 PF00384 Molybdopterin oxidoreductase CMCT_RS03810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CMCT_RS03815 PF03458 UPF0126 domain CMCT_RS03820 PF00202 Aminotransferase class-III CMCT_RS03825 PF01416 tRNA pseudouridine synthase CMCT_RS03835 PF06750 Bacterial Peptidase A24 N-terminal domain CMCT_RS03835 PF01478 Type IV leader peptidase family CMCT_RS03840 PF08889 WbqC-like protein family CMCT_RS03855 PF01255 Putative undecaprenyl diphosphate synthase CMCT_RS03865 PF02441 Flavoprotein CMCT_RS03865 PF04127 DNA / pantothenate metabolism flavoprotein CMCT_RS03870 PF00132 Bacterial transferase hexapeptide (six repeats) CMCT_RS03870 PF12804 MobA-like NTP transferase domain CMCT_RS03875 PF01618 MotA/TolQ/ExbB proton channel family CMCT_RS03880 PF00691 OmpA family CMCT_RS03880 PF13677 Membrane MotB of proton-channel complex MotA/MotB CMCT_RS03885 PF00813 FliP family CMCT_RS03900 PF00873 AcrB/AcrD/AcrF family CMCT_RS03910 PF00892 EamA-like transporter family CMCT_RS03915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMCT_RS03920 PF00072 Response regulator receiver domain CMCT_RS03920 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS03935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CMCT_RS03940 PF12704 MacB-like periplasmic core domain CMCT_RS03940 PF02687 FtsX-like permease family CMCT_RS03940 PF00005 ABC transporter CMCT_RS03955 PF02661 Fic/DOC family CMCT_RS03970 PF00005 ABC transporter CMCT_RS03975 PF02405 Permease MlaE CMCT_RS03980 PF01702 Queuine tRNA-ribosyltransferase CMCT_RS04085 PF09669 Phage regulatory protein Rha (Phage_pRha) CMCT_RS04085 PF10549 ORF11CD3 domain CMCT_RS04120 PF00589 Phage integrase family CMCT_RS04120 PF14659 Phage integrase, N-terminal SAM-like domain CMCT_RS04125 PF13426 PAS domain CMCT_RS04125 PF08447 PAS fold CMCT_RS04125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS04135 PF01761 3-dehydroquinate synthase CMCT_RS04145 PF04055 Radical SAM superfamily CMCT_RS04145 PF00919 Uncharacterized protein family UPF0004 CMCT_RS04150 PF06480 FtsH Extracellular CMCT_RS04150 PF17862 AAA+ lid domain CMCT_RS04150 PF00004 ATPase family associated with various cellular activities (AAA) CMCT_RS04150 PF01434 Peptidase family M41 CMCT_RS04155 PF00994 Probable molybdopterin binding domain CMCT_RS04160 PF01883 Iron-sulfur cluster assembly protein CMCT_RS04175 PF07509 Protein of unknown function (DUF1523) CMCT_RS04185 PF00155 Aminotransferase class I and II CMCT_RS04190 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CMCT_RS04190 PF17810 Arginine decarboxylase helical bundle domain CMCT_RS04190 PF17944 Arginine decarboxylase C-terminal helical extension CMCT_RS04195 PF13393 Histidyl-tRNA synthetase CMCT_RS04195 PF03129 Anticodon binding domain CMCT_RS04200 PF02492 CobW/HypB/UreG, nucleotide-binding domain CMCT_RS04205 PF01455 HupF/HypC family CMCT_RS04210 PF01924 Hydrogenase formation hypA family CMCT_RS04215 PF02769 AIR synthase related protein, C-terminal domain CMCT_RS04215 PF00586 AIR synthase related protein, N-terminal domain CMCT_RS04220 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CMCT_RS04225 PF01594 AI-2E family transporter CMCT_RS04235 PF02618 YceG-like family CMCT_RS04240 PF03971 Monomeric isocitrate dehydrogenase CMCT_RS04245 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CMCT_RS04245 PF00056 lactate/malate dehydrogenase, NAD binding domain CMCT_RS04255 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CMCT_RS04255 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CMCT_RS04255 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CMCT_RS04260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CMCT_RS04270 PF02910 Fumarate reductase flavoprotein C-term CMCT_RS04270 PF00890 FAD binding domain CMCT_RS04275 PF13085 2Fe-2S iron-sulfur cluster binding domain CMCT_RS04275 PF13183 4Fe-4S dicluster domain CMCT_RS04280 PF02754 Cysteine-rich domain CMCT_RS04290 PF02561 Flagellar protein FliS CMCT_RS04295 PF07195 Flagellar hook-associated protein 2 C-terminus CMCT_RS04295 PF02465 Flagellar hook-associated protein 2 N-terminus CMCT_RS04300 PF03646 FlaG protein CMCT_RS04315 PF02119 Flagellar P-ring protein CMCT_RS04335 PF07196 Flagellin hook IN motif CMCT_RS04335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CMCT_RS04345 PF00080 Copper/zinc superoxide dismutase (SODC) CMCT_RS04350 PF01925 Sulfite exporter TauE/SafE CMCT_RS04355 PF00119 ATP synthase A chain CMCT_RS04360 PF02934 GatB/GatE catalytic domain CMCT_RS04360 PF02637 GatB domain CMCT_RS04365 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CMCT_RS04365 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CMCT_RS04370 PF00933 Glycosyl hydrolase family 3 N terminal domain CMCT_RS04375 PF02223 Thymidylate kinase CMCT_RS04380 PF01467 Cytidylyltransferase-like CMCT_RS04385 PF02441 Flavoprotein CMCT_RS04400 PF00994 Probable molybdopterin binding domain CMCT_RS04400 PF03454 MoeA C-terminal region (domain IV) CMCT_RS04400 PF03453 MoeA N-terminal region (domain I and II) CMCT_RS04405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CMCT_RS04415 PF04305 Protein of unknown function (DUF455) CMCT_RS04425 PF03222 Tryptophan/tyrosine permease family CMCT_RS04430 PF03313 Serine dehydratase alpha chain CMCT_RS04430 PF03315 Serine dehydratase beta chain CMCT_RS04435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMCT_RS04440 PF12729 Four helix bundle sensory module for signal transduction CMCT_RS04440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS04440 PF00672 HAMP domain CMCT_RS04445 PF01066 CDP-alcohol phosphatidyltransferase CMCT_RS04455 PF00701 Dihydrodipicolinate synthetase family CMCT_RS04465 PF01180 Dihydroorotate dehydrogenase CMCT_RS04470 PF00005 ABC transporter CMCT_RS04470 PF00664 ABC transporter transmembrane region CMCT_RS04475 PF01406 tRNA synthetases class I (C) catalytic domain CMCT_RS04475 PF09190 DALR domain CMCT_RS04480 PF03023 Lipid II flippase MurJ CMCT_RS04490 PF07499 RuvA, C-terminal domain CMCT_RS04490 PF01330 RuvA N terminal domain CMCT_RS04495 PF01820 D-ala D-ala ligase N-terminus CMCT_RS04495 PF07478 D-ala D-ala ligase C-terminus CMCT_RS04510 PF08245 Mur ligase middle domain CMCT_RS04510 PF02875 Mur ligase family, glutamate ligase domain CMCT_RS04520 PF00871 Acetokinase family CMCT_RS04525 PF01515 Phosphate acetyl/butaryl transferase CMCT_RS04530 PF05643 Putative bacterial lipoprotein (DUF799) CMCT_RS04540 PF03783 Curli production assembly/transport component CsgG CMCT_RS04545 PF02107 Flagellar L-ring protein CMCT_RS04560 PF05992 SbmA/BacA-like family CMCT_RS04565 PF00675 Insulinase (Peptidase family M16) CMCT_RS04565 PF05193 Peptidase M16 inactive domain CMCT_RS04580 PF00005 ABC transporter CMCT_RS04590 PF07715 TonB-dependent Receptor Plug Domain CMCT_RS04595 PF00581 Rhodanese-like domain CMCT_RS04605 PF00218 Indole-3-glycerol phosphate synthase CMCT_RS04620 PF05175 Methyltransferase small domain CMCT_RS04620 PF08468 Methyltransferase small domain N-terminal CMCT_RS04630 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMCT_RS04640 PF01474 Class-II DAHP synthetase family CMCT_RS04645 PF00892 EamA-like transporter family CMCT_RS04650 PF00892 EamA-like transporter family CMCT_RS04660 PF03577 Peptidase family C69 CMCT_RS04670 PF01654 Cytochrome bd terminal oxidase subunit I CMCT_RS04675 PF02322 Cytochrome bd terminal oxidase subunit II CMCT_RS04680 PF00132 Bacterial transferase hexapeptide (six repeats) CMCT_RS04680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CMCT_RS04685 PF10369 Small subunit of acetolactate synthase CMCT_RS04690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CMCT_RS04690 PF00205 Thiamine pyrophosphate enzyme, central domain CMCT_RS04690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CMCT_RS04695 PF06969 HemN C-terminal domain CMCT_RS04695 PF04055 Radical SAM superfamily CMCT_RS04700 PF02416 mttA/Hcf106 family CMCT_RS04705 PF00902 Sec-independent protein translocase protein (TatC) CMCT_RS04710 PF02547 Queuosine biosynthesis protein CMCT_RS04720 PF08753 NikR C terminal nickel binding domain CMCT_RS04720 PF01402 Ribbon-helix-helix protein, copG family CMCT_RS04725 PF00708 Acylphosphatase CMCT_RS04725 PF17788 HypF Kae1-like domain CMCT_RS04725 PF07503 HypF finger CMCT_RS04725 PF01300 Telomere recombination CMCT_RS04735 PF01750 Hydrogenase maturation protease CMCT_RS04740 PF01292 Prokaryotic cytochrome b561 CMCT_RS04745 PF00374 Nickel-dependent hydrogenase CMCT_RS04750 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CMCT_RS04750 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CMCT_RS04750 PF10518 TAT (twin-arginine translocation) pathway signal sequence CMCT_RS04755 PF07724 AAA domain (Cdc48 subfamily) CMCT_RS04755 PF10431 C-terminal, D2-small domain, of ClpB protein CMCT_RS04755 PF02861 Clp amino terminal domain, pathogenicity island component CMCT_RS04755 PF00004 ATPase family associated with various cellular activities (AAA) CMCT_RS04755 PF17871 AAA lid domain CMCT_RS04760 PF13180 PDZ domain CMCT_RS04760 PF03572 Peptidase family S41 CMCT_RS04765 PF01259 SAICAR synthetase CMCT_RS04770 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CMCT_RS04785 PF01553 Acyltransferase CMCT_RS04800 PF00183 Hsp90 protein CMCT_RS04805 PF04011 LemA family CMCT_RS04830 PF12072 Domain of unknown function (DUF3552) CMCT_RS04830 PF01966 HD domain CMCT_RS04840 PF08534 Redoxin CMCT_RS04845 PF00448 SRP54-type protein, GTPase domain CMCT_RS04860 PF18073 Rubredoxin metal binding domain CMCT_RS04865 PF13649 Methyltransferase domain CMCT_RS04870 PF06574 FAD synthetase CMCT_RS04870 PF01687 Riboflavin kinase CMCT_RS04875 PF01479 S4 domain CMCT_RS04875 PF01728 FtsJ-like methyltransferase CMCT_RS04880 PF00533 BRCA1 C Terminus (BRCT) domain CMCT_RS04880 PF12826 Helix-hairpin-helix motif CMCT_RS04880 PF01653 NAD-dependent DNA ligase adenylation domain CMCT_RS04880 PF03120 NAD-dependent DNA ligase OB-fold domain CMCT_RS04885 PF00809 Pterin binding enzyme CMCT_RS04890 PF09115 DNA polymerase III, delta subunit, C terminal CMCT_RS04900 PF00696 Amino acid kinase family CMCT_RS04900 PF01842 ACT domain CMCT_RS04900 PF13840 ACT domain CMCT_RS04905 PF00293 NUDIX domain CMCT_RS04915 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CMCT_RS04925 PF01177 Asp/Glu/Hydantoin racemase CMCT_RS04930 PF00589 Phage integrase family CMCT_RS04930 PF18644 Phage integrase SAM-like domain CMCT_RS04935 PF01098 Cell cycle protein CMCT_RS04940 PF04101 Glycosyltransferase family 28 C-terminal domain CMCT_RS04940 PF03033 Glycosyltransferase family 28 N-terminal domain CMCT_RS04950 PF02525 Flavodoxin-like fold CMCT_RS04955 PF01168 Alanine racemase, N-terminal domain CMCT_RS04960 PF02163 Peptidase family M50 CMCT_RS04960 PF17820 PDZ domain CMCT_RS04975 PF04552 Sigma-54, DNA binding domain CMCT_RS04975 PF00309 Sigma-54 factor, Activator interacting domain (AID) CMCT_RS04975 PF04963 Sigma-54 factor, core binding domain CMCT_RS04980 PF00005 ABC transporter CMCT_RS04985 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CMCT_RS04990 PF01479 S4 domain CMCT_RS04995 PF00764 Arginosuccinate synthase CMCT_RS05000 PF01281 Ribosomal protein L9, N-terminal domain CMCT_RS05000 PF03948 Ribosomal protein L9, C-terminal domain CMCT_RS05005 PF00227 Proteasome subunit CMCT_RS05010 PF10431 C-terminal, D2-small domain, of ClpB protein CMCT_RS05010 PF07724 AAA domain (Cdc48 subfamily) CMCT_RS05015 PF01926 50S ribosome-binding GTPase CMCT_RS05015 PF07650 KH domain CMCT_RS05035 PF00263 Bacterial type II and III secretion system protein CMCT_RS05035 PF04972 BON domain CMCT_RS05035 PF13629 Pilus formation protein N terminal region CMCT_RS05055 PF00437 Type II/IV secretion system protein CMCT_RS05060 PF00482 Type II secretion system (T2SS), protein F CMCT_RS05070 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CMCT_RS05095 PF01966 HD domain CMCT_RS05095 PF00072 Response regulator receiver domain CMCT_RS05105 PF00593 TonB dependent receptor CMCT_RS05105 PF07715 TonB-dependent Receptor Plug Domain CMCT_RS05110 PF00465 Iron-containing alcohol dehydrogenase CMCT_RS05120 PF00132 Bacterial transferase hexapeptide (six repeats) CMCT_RS05120 PF12464 Maltose acetyltransferase CMCT_RS05135 PF06719 AraC-type transcriptional regulator N-terminus CMCT_RS05135 PF12833 Helix-turn-helix domain CMCT_RS05145 PF00291 Pyridoxal-phosphate dependent enzyme CMCT_RS05145 PF13291 ACT domain CMCT_RS05155 PF05958 tRNA (Uracil-5-)-methyltransferase CMCT_RS05160 PF03553 Na+/H+ antiporter family CMCT_RS05165 PF00106 short chain dehydrogenase CMCT_RS05175 PF11791 Aconitate B N-terminal domain CMCT_RS05175 PF06434 Aconitate hydratase 2 N-terminus CMCT_RS05175 PF00330 Aconitase family (aconitate hydratase) CMCT_RS05180 PF01142 tRNA pseudouridine synthase D (TruD) CMCT_RS05185 PF02769 AIR synthase related protein, C-terminal domain CMCT_RS05185 PF00586 AIR synthase related protein, N-terminal domain CMCT_RS05195 PF01384 Phosphate transporter family CMCT_RS05210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CMCT_RS05210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CMCT_RS05230 PF00925 GTP cyclohydrolase II CMCT_RS05230 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CMCT_RS05235 PF00091 Tubulin/FtsZ family, GTPase domain CMCT_RS05235 PF12327 FtsZ family, C-terminal domain CMCT_RS05240 PF02491 SHS2 domain inserted in FTSA CMCT_RS05245 PF13145 PPIC-type PPIASE domain CMCT_RS05255 PF01795 MraW methylase family CMCT_RS05275 PF01063 Amino-transferase class IV CMCT_RS05280 PF04463 Protein of unknown function (DUF523) CMCT_RS05285 PF01084 Ribosomal protein S18 CMCT_RS05290 PF00436 Single-strand binding protein family CMCT_RS05295 PF01250 Ribosomal protein S6 CMCT_RS05305 PF00773 RNB domain CMCT_RS05315 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CMCT_RS05315 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CMCT_RS05320 PF04748 Divergent polysaccharide deacetylase CMCT_RS05325 PF02481 DNA recombination-mediator protein A CMCT_RS05325 PF17782 DprA winged helix domain CMCT_RS05330 PF03652 Holliday junction resolvase CMCT_RS05340 PF04028 Domain of unknown function (DUF374) CMCT_RS05345 PF04055 Radical SAM superfamily CMCT_RS05345 PF00919 Uncharacterized protein family UPF0004 CMCT_RS05345 PF01938 TRAM domain CMCT_RS05355 PF08666 SAF domain CMCT_RS05355 PF03102 NeuB family CMCT_RS05380 PF13184 NusA-like KH domain CMCT_RS05380 PF08529 NusA N-terminal domain CMCT_RS05385 PF04851 Type III restriction enzyme, res subunit CMCT_RS05385 PF00271 Helicase conserved C-terminal domain CMCT_RS05390 PF05193 Peptidase M16 inactive domain CMCT_RS05395 PF04055 Radical SAM superfamily CMCT_RS05455 PF00834 Ribulose-phosphate 3 epimerase family CMCT_RS05470 PF00830 Ribosomal L28 family CMCT_RS05480 PF01960 ArgJ family CMCT_RS05485 PF13090 Polyphosphate kinase C-terminal domain 2 CMCT_RS05485 PF13089 Polyphosphate kinase N-terminal domain CMCT_RS05485 PF02503 Polyphosphate kinase middle domain CMCT_RS05485 PF17941 Polyphosphate kinase C-terminal domain 1 CMCT_RS05530 PF00072 Response regulator receiver domain CMCT_RS05530 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS05535 PF01171 PP-loop family CMCT_RS05540 PF00919 Uncharacterized protein family UPF0004 CMCT_RS05540 PF04055 Radical SAM superfamily CMCT_RS05545 PF02569 Pantoate-beta-alanine ligase CMCT_RS05550 PF03462 PCRF domain CMCT_RS05550 PF00472 RF-1 domain CMCT_RS05555 PF04073 Aminoacyl-tRNA editing domain CMCT_RS05560 PF04851 Type III restriction enzyme, res subunit CMCT_RS05560 PF02151 UvrB/uvrC motif CMCT_RS05560 PF17757 UvrB interaction domain CMCT_RS05560 PF00271 Helicase conserved C-terminal domain CMCT_RS05560 PF12344 Ultra-violet resistance protein B CMCT_RS05570 PF04851 Type III restriction enzyme, res subunit CMCT_RS05570 PF00271 Helicase conserved C-terminal domain CMCT_RS05570 PF12344 Ultra-violet resistance protein B CMCT_RS05570 PF17757 UvrB interaction domain CMCT_RS05570 PF02151 UvrB/uvrC motif CMCT_RS05585 PF04851 Type III restriction enzyme, res subunit CMCT_RS05585 PF02151 UvrB/uvrC motif CMCT_RS05585 PF00271 Helicase conserved C-terminal domain CMCT_RS05585 PF17757 UvrB interaction domain CMCT_RS05585 PF12344 Ultra-violet resistance protein B CMCT_RS05605 PF00271 Helicase conserved C-terminal domain CMCT_RS05605 PF00270 DEAD/DEAH box helicase CMCT_RS05605 PF17764 3′ DNA-binding domain (3′BD) CMCT_RS05605 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CMCT_RS05605 PF18074 Primosomal protein N C-terminal domain CMCT_RS05610 PF00132 Bacterial transferase hexapeptide (six repeats) CMCT_RS05615 PF00291 Pyridoxal-phosphate dependent enzyme CMCT_RS05630 PF02559 CarD-like/TRCF domain CMCT_RS05630 PF00270 DEAD/DEAH box helicase CMCT_RS05630 PF00271 Helicase conserved C-terminal domain CMCT_RS05630 PF17757 UvrB interaction domain CMCT_RS05630 PF03461 TRCF domain CMCT_RS05635 PF02554 Carbon starvation protein CstA CMCT_RS05645 PF00072 Response regulator receiver domain CMCT_RS05645 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS05655 PF08264 Anticodon-binding domain of tRNA CMCT_RS05655 PF00133 tRNA synthetases class I (I, L, M and V) CMCT_RS05655 PF09334 tRNA synthetases class I (M) CMCT_RS05655 PF13603 Leucyl-tRNA synthetase, Domain 2 CMCT_RS05665 PF02355 Protein export membrane protein CMCT_RS05665 PF07549 SecD/SecF GG Motif CMCT_RS05670 PF02355 Protein export membrane protein CMCT_RS05675 PF02699 Preprotein translocase subunit CMCT_RS05685 PF00438 S-adenosylmethionine synthetase, N-terminal domain CMCT_RS05685 PF02773 S-adenosylmethionine synthetase, C-terminal domain CMCT_RS05685 PF02772 S-adenosylmethionine synthetase, central domain CMCT_RS05690 PF00375 Sodium:dicarboxylate symporter family CMCT_RS05705 PF00497 Bacterial extracellular solute-binding proteins, family 3 CMCT_RS05710 PF02397 Bacterial sugar transferase CMCT_RS05720 PF01501 Glycosyl transferase family 8 CMCT_RS05720 PF00535 Glycosyl transferase family 2 CMCT_RS05725 PF03102 NeuB family CMCT_RS05725 PF08666 SAF domain CMCT_RS05735 PF02348 Cytidylyltransferase CMCT_RS05740 PF02350 UDP-N-acetylglucosamine 2-epimerase CMCT_RS05745 PF06002 Alpha-2,3-sialyltransferase (CST-I) CMCT_RS05750 PF00664 ABC transporter transmembrane region CMCT_RS05750 PF00005 ABC transporter CMCT_RS05755 PF00535 Glycosyl transferase family 2 CMCT_RS05765 PF00535 Glycosyl transferase family 2 CMCT_RS05770 PF01501 Glycosyl transferase family 8 CMCT_RS05770 PF00535 Glycosyl transferase family 2 CMCT_RS05775 PF01531 Glycosyl transferase family 11 CMCT_RS05785 PF01370 NAD dependent epimerase/dehydratase family CMCT_RS05790 PF16363 GDP-mannose 4,6 dehydratase CMCT_RS05795 PF00483 Nucleotidyl transferase CMCT_RS05795 PF01050 Mannose-6-phosphate isomerase CMCT_RS05800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CMCT_RS05800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CMCT_RS05800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CMCT_RS05800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CMCT_RS05805 PF00118 TCP-1/cpn60 chaperonin family CMCT_RS05810 PF00166 Chaperonin 10 Kd subunit CMCT_RS05825 PF03741 Integral membrane protein TerC family CMCT_RS05830 PF00293 NUDIX domain CMCT_RS05840 PF01551 Peptidase family M23 CMCT_RS05840 PF01464 Transglycosylase SLT domain CMCT_RS05840 PF10145 Phage-related minor tail protein CMCT_RS05850 PF03631 Virulence factor BrkB CMCT_RS05860 PF00772 DnaB-like helicase N terminal domain CMCT_RS05860 PF03796 DnaB-like helicase C terminal domain CMCT_RS05865 PF04551 GcpE protein CMCT_RS05870 PF01842 ACT domain CMCT_RS05870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CMCT_RS05870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CMCT_RS05880 PF00575 S1 RNA binding domain CMCT_RS05885 PF01451 Low molecular weight phosphotyrosine protein phosphatase CMCT_RS05890 PF02401 LytB protein CMCT_RS05895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CMCT_RS05900 PF01588 Putative tRNA binding domain CMCT_RS05900 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CMCT_RS05900 PF03147 Ferredoxin-fold anticodon binding domain CMCT_RS05900 PF03484 tRNA synthetase B5 domain CMCT_RS05900 PF03483 B3/4 domain CMCT_RS05905 PF01409 tRNA synthetases class II core domain (F) CMCT_RS05905 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CMCT_RS05910 PF01230 HIT domain CMCT_RS05915 PF00206 Lyase CMCT_RS05915 PF14698 Argininosuccinate lyase C-terminal CMCT_RS05925 PF00403 Heavy-metal-associated domain CMCT_RS05935 PF13508 Acetyltransferase (GNAT) domain CMCT_RS05940 PF01709 Transcriptional regulator CMCT_RS05945 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CMCT_RS05950 PF00375 Sodium:dicarboxylate symporter family CMCT_RS05955 PF17200 Single Cache domain 2 CMCT_RS05955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS05955 PF00672 HAMP domain CMCT_RS05960 PF02687 FtsX-like permease family CMCT_RS05960 PF12704 MacB-like periplasmic core domain CMCT_RS05965 PF01043 SecA preprotein cross-linking domain CMCT_RS05965 PF02810 SEC-C motif CMCT_RS05965 PF07516 SecA Wing and Scaffold domain CMCT_RS05965 PF07517 SecA DEAD-like domain CMCT_RS05980 PF05970 PIF1-like helicase CMCT_RS05980 PF02689 Helicase CMCT_RS05990 PF01979 Amidohydrolase family CMCT_RS05995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CMCT_RS05995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CMCT_RS06015 PF00771 FHIPEP family CMCT_RS06020 PF02082 Transcriptional regulator CMCT_RS06025 PF01063 Amino-transferase class IV CMCT_RS06030 PF00425 chorismate binding enzyme CMCT_RS06035 PF00312 Ribosomal protein S15 CMCT_RS06040 PF01312 FlhB HrpN YscU SpaS Family CMCT_RS06065 PF00202 Aminotransferase class-III CMCT_RS06075 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CMCT_RS06075 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CMCT_RS06080 PF10502 Signal peptidase, peptidase S26 CMCT_RS06085 PF02163 Peptidase family M50 CMCT_RS06090 PF02502 Ribose/Galactose Isomerase CMCT_RS06100 PF00156 Phosphoribosyl transferase domain CMCT_RS06105 PF09335 SNARE associated Golgi protein CMCT_RS06115 PF00883 Cytosol aminopeptidase family, catalytic domain CMCT_RS06125 PF06071 Protein of unknown function (DUF933) CMCT_RS06125 PF01926 50S ribosome-binding GTPase CMCT_RS06130 PF05362 Lon protease (S16) C-terminal proteolytic domain CMCT_RS06130 PF02190 ATP-dependent protease La (LON) substrate-binding domain CMCT_RS06130 PF00004 ATPase family associated with various cellular activities (AAA) CMCT_RS06140 PF02623 FliW protein CMCT_RS06165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CMCT_RS06165 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CMCT_RS06170 PF01739 CheR methyltransferase, SAM binding domain CMCT_RS06175 PF00072 Response regulator receiver domain CMCT_RS06175 PF01339 CheB methylesterase CMCT_RS06180 PF00672 HAMP domain CMCT_RS06180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS06190 PF05140 ResB-like family CMCT_RS06190 PF01578 Cytochrome C assembly protein CMCT_RS06195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS06195 PF02743 Cache domain CMCT_RS06195 PF00672 HAMP domain CMCT_RS06200 PF01808 AICARFT/IMPCHase bienzyme CMCT_RS06200 PF02142 MGS-like domain CMCT_RS06205 PF05099 Tellurite resistance protein TerB CMCT_RS06205 PF00226 DnaJ domain CMCT_RS06215 PF02769 AIR synthase related protein, C-terminal domain CMCT_RS06215 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CMCT_RS06215 PF00586 AIR synthase related protein, N-terminal domain CMCT_RS06220 PF02525 Flavodoxin-like fold CMCT_RS06225 PF10396 GTP-binding protein TrmE N-terminus CMCT_RS06225 PF12631 MnmE helical domain CMCT_RS06225 PF01926 50S ribosome-binding GTPase CMCT_RS06235 PF14849 YidC periplasmic domain CMCT_RS06235 PF02096 60Kd inner membrane protein CMCT_RS06240 PF01809 Putative membrane protein insertion efficiency factor CMCT_RS06245 PF00825 Ribonuclease P CMCT_RS06250 PF00468 Ribosomal protein L34 CMCT_RS06275 PF03061 Thioesterase superfamily CMCT_RS06290 PF17827 PrmC N-terminal domain CMCT_RS06290 PF05175 Methyltransferase small domain CMCT_RS06295 PF01435 Peptidase family M48 CMCT_RS06295 PF16491 CAAX prenyl protease N-terminal, five membrane helices CMCT_RS06300 PF00209 Sodium:neurotransmitter symporter family CMCT_RS06305 PF02028 BCCT, betaine/carnitine/choline family transporter CMCT_RS06320 PF00209 Sodium:neurotransmitter symporter family CMCT_RS06325 PF01554 MatE CMCT_RS06330 PF07690 Major Facilitator Superfamily CMCT_RS06345 PF16868 NMT1-like family CMCT_RS06350 PF00795 Carbon-nitrogen hydrolase CMCT_RS06355 PF16916 Dimerisation domain of Zinc Transporter CMCT_RS06355 PF01545 Cation efflux family CMCT_RS06360 PF04371 Porphyromonas-type peptidyl-arginine deiminase CMCT_RS06370 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS06375 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS06380 PF00005 ABC transporter CMCT_RS06390 PF00884 Sulfatase CMCT_RS06390 PF08019 Phosphoethanolamine transferase EptA/EptB CMCT_RS06400 PF00912 Transglycosylase CMCT_RS06400 PF00905 Penicillin binding protein transpeptidase domain CMCT_RS06400 PF17092 Penicillin-binding protein OB-like domain CMCT_RS06405 PF02545 Maf-like protein CMCT_RS06415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CMCT_RS06415 PF01411 tRNA synthetases class II (A) CMCT_RS06415 PF02272 DHHA1 domain CMCT_RS06425 PF00762 Ferrochelatase CMCT_RS06435 PF00905 Penicillin binding protein transpeptidase domain CMCT_RS06435 PF03717 Penicillin-binding Protein dimerisation domain CMCT_RS06440 PF02049 Flagellar hook-basal body complex protein FliE CMCT_RS06445 PF00460 Flagella basal body rod protein CMCT_RS06445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CMCT_RS06450 PF00460 Flagella basal body rod protein CMCT_RS06460 PF01668 SmpB protein CMCT_RS06465 PF00288 GHMP kinases N terminal domain CMCT_RS06470 PF02599 Global regulator protein family CMCT_RS06475 PF01509 TruB family pseudouridylate synthase (N terminal domain) CMCT_RS06480 PF13361 UvrD-like helicase C-terminal domain CMCT_RS06480 PF00580 UvrD/REP helicase N-terminal domain CMCT_RS06485 PF10531 SLBB domain CMCT_RS06490 PF01245 Ribosomal protein L19 CMCT_RS06495 PF01746 tRNA (Guanine-1)-methyltransferase CMCT_RS06500 PF01782 RimM N-terminal domain CMCT_RS06510 PF00886 Ribosomal protein S16 CMCT_RS06515 PF00448 SRP54-type protein, GTPase domain CMCT_RS06515 PF02881 SRP54-type protein, helical bundle domain CMCT_RS06515 PF02978 Signal peptide binding domain CMCT_RS06520 PF00849 RNA pseudouridylate synthase CMCT_RS06525 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CMCT_RS06525 PF02390 Putative methyltransferase CMCT_RS06535 PF01784 NIF3 (NGG1p interacting factor 3) CMCT_RS06540 PF02091 Glycyl-tRNA synthetase alpha subunit CMCT_RS06545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CMCT_RS06545 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMCT_RS06550 PF01022 Bacterial regulatory protein, arsR family CMCT_RS06565 PF00731 AIR carboxylase CMCT_RS06580 PF02811 PHP domain CMCT_RS06585 PF00120 Glutamine synthetase, catalytic domain CMCT_RS06585 PF03951 Glutamine synthetase, beta-Grasp domain CMCT_RS06605 PF00403 Heavy-metal-associated domain CMCT_RS06615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CMCT_RS06615 PF07498 Rho termination factor, N-terminal domain CMCT_RS06615 PF07497 Rho termination factor, RNA-binding domain CMCT_RS06625 PF12169 DNA polymerase III subunits gamma and tau domain III CMCT_RS06625 PF12170 DNA polymerase III tau subunit V interacting with alpha CMCT_RS06635 PF03498 Cytolethal distending toxin A/C domain CMCT_RS06640 PF03372 Endonuclease/Exonuclease/phosphatase family CMCT_RS06645 PF03498 Cytolethal distending toxin A/C domain CMCT_RS06650 PF01098 Cell cycle protein CMCT_RS06655 PF01479 S4 domain CMCT_RS06655 PF00849 RNA pseudouridylate synthase CMCT_RS06665 PF02390 Putative methyltransferase CMCT_RS06670 PF09383 NIL domain CMCT_RS06670 PF00005 ABC transporter CMCT_RS06685 PF00696 Amino acid kinase family CMCT_RS06690 PF01192 RNA polymerase Rpb6 CMCT_RS06695 PF13291 ACT domain CMCT_RS06695 PF02824 TGS domain CMCT_RS06695 PF04607 Region found in RelA / SpoT proteins CMCT_RS06700 PF00579 tRNA synthetases class I (W and Y) CMCT_RS06705 PF03060 Nitronate monooxygenase CMCT_RS06710 PF01520 N-acetylmuramoyl-L-alanine amidase CMCT_RS06715 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CMCT_RS06715 PF01266 FAD dependent oxidoreductase CMCT_RS06725 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CMCT_RS06725 PF01138 3' exoribonuclease family, domain 1 CMCT_RS06725 PF03725 3' exoribonuclease family, domain 2 CMCT_RS06725 PF00013 KH domain CMCT_RS06725 PF00575 S1 RNA binding domain CMCT_RS06735 PF03968 OstA-like protein CMCT_RS06735 PF04453 LPS transport system D CMCT_RS06745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CMCT_RS06745 PF02843 Phosphoribosylglycinamide synthetase, C domain CMCT_RS06745 PF02844 Phosphoribosylglycinamide synthetase, N domain CMCT_RS06755 PF07690 Major Facilitator Superfamily CMCT_RS06765 PF08207 Elongation factor P (EF-P) KOW-like domain CMCT_RS06765 PF09285 Elongation factor P, C-terminal CMCT_RS06765 PF01132 Elongation factor P (EF-P) OB domain CMCT_RS06775 PF14602 Hexapeptide repeat of succinyl-transferase CMCT_RS06775 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CMCT_RS06780 PF04886 PT repeat CMCT_RS06780 PF00593 TonB dependent receptor CMCT_RS06780 PF07715 TonB-dependent Receptor Plug Domain CMCT_RS06785 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CMCT_RS06790 PF01029 NusB family CMCT_RS06795 PF00885 6,7-dimethyl-8-ribityllumazine synthase CMCT_RS06800 PF05970 PIF1-like helicase CMCT_RS06800 PF02689 Helicase CMCT_RS06805 PF00793 DAHP synthetase I family CMCT_RS06815 PF01926 50S ribosome-binding GTPase CMCT_RS06815 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CMCT_RS06820 PF01202 Shikimate kinase CMCT_RS06825 PF00579 tRNA synthetases class I (W and Y) CMCT_RS06830 PF02403 Seryl-tRNA synthetase N-terminal domain CMCT_RS06830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CMCT_RS06840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CMCT_RS06840 PF14579 Helix-hairpin-helix motif CMCT_RS06840 PF02811 PHP domain CMCT_RS06840 PF07733 Bacterial DNA polymerase III alpha NTPase domain CMCT_RS06845 PF00749 tRNA synthetases class I (E and Q), catalytic domain CMCT_RS06850 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CMCT_RS06915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CMCT_RS06915 PF14572 Phosphoribosyl synthetase-associated domain CMCT_RS06925 PF00121 Triosephosphate isomerase CMCT_RS06930 PF00162 Phosphoglycerate kinase CMCT_RS06935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CMCT_RS06935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CMCT_RS06940 PF01467 Cytidylyltransferase-like CMCT_RS06950 PF05736 OprF membrane domain CMCT_RS06950 PF00691 OmpA family CMCT_RS06960 PF03641 Possible lysine decarboxylase CMCT_RS06965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CMCT_RS06965 PF04509 CheC-like family CMCT_RS06970 PF02154 Flagellar motor switch protein FliM CMCT_RS06970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CMCT_RS06975 PF04545 Sigma-70, region 4 CMCT_RS06975 PF04539 Sigma-70 region 3 CMCT_RS06975 PF04542 Sigma-70 region 2 CMCT_RS06985 PF10609 NUBPL iron-transfer P-loop NTPase CMCT_RS06990 PF00448 SRP54-type protein, GTPase domain CMCT_RS06995 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CMCT_RS07000 PF00557 Metallopeptidase family M24 CMCT_RS07000 PF01321 Creatinase/Prolidase N-terminal domain CMCT_RS07005 PF01220 Dehydroquinase class II CMCT_RS07010 PF01979 Amidohydrolase family CMCT_RS07015 PF01872 RibD C-terminal domain CMCT_RS07015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CMCT_RS07020 PF01268 Formate--tetrahydrofolate ligase CMCT_RS07025 PF17384 RimP C-terminal SH3 domain CMCT_RS07025 PF02576 RimP N-terminal domain CMCT_RS07030 PF02033 Ribosome-binding factor A CMCT_RS07035 PF04760 Translation initiation factor IF-2, N-terminal region CMCT_RS07035 PF11987 Translation-initiation factor 2 CMCT_RS07035 PF00009 Elongation factor Tu GTP binding domain CMCT_RS07045 PF00288 GHMP kinases N terminal domain CMCT_RS07045 PF08544 GHMP kinases C terminal CMCT_RS07055 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CMCT_RS07065 PF01842 ACT domain CMCT_RS07065 PF02153 Prephenate dehydrogenase CMCT_RS07070 PF07244 Surface antigen variable number repeat CMCT_RS07070 PF01103 Surface antigen CMCT_RS07075 PF00476 DNA polymerase family A CMCT_RS07075 PF01367 5'-3' exonuclease, C-terminal SAM fold CMCT_RS07075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CMCT_RS07090 PF01497 Periplasmic binding protein CMCT_RS07095 PF01032 FecCD transport family CMCT_RS07100 PF00005 ABC transporter CMCT_RS07105 PF00127 Copper binding proteins, plastocyanin/azurin family CMCT_RS07110 PF18030 RimK PreATP-grasp domain CMCT_RS07110 PF08443 RimK-like ATP-grasp domain CMCT_RS07115 PF01926 50S ribosome-binding GTPase CMCT_RS07115 PF01018 GTP1/OBG CMCT_RS07135 PF01016 Ribosomal L27 protein CMCT_RS07140 PF00829 Ribosomal prokaryotic L21 protein CMCT_RS07145 PF00034 Cytochrome c CMCT_RS07145 PF03150 Di-haem cytochrome c peroxidase CMCT_RS07150 PF01312 FlhB HrpN YscU SpaS Family CMCT_RS07155 PF02911 Formyl transferase, C-terminal domain CMCT_RS07155 PF00551 Formyl transferase CMCT_RS07165 PF13614 AAA domain CMCT_RS07170 PF02195 ParB-like nuclease domain CMCT_RS07170 PF17762 HTH domain found in ParB protein CMCT_RS07175 PF00430 ATP synthase B/B' CF(0) CMCT_RS07180 PF00430 ATP synthase B/B' CF(0) CMCT_RS07185 PF00213 ATP synthase delta (OSCP) subunit CMCT_RS07190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CMCT_RS07190 PF00306 ATP synthase alpha/beta chain, C terminal domain CMCT_RS07190 PF02874 ATP synthase alpha/beta family, beta-barrel domain CMCT_RS07195 PF00231 ATP synthase CMCT_RS07200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CMCT_RS07200 PF02874 ATP synthase alpha/beta family, beta-barrel domain CMCT_RS07205 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CMCT_RS07210 PF01618 MotA/TolQ/ExbB proton channel family CMCT_RS07215 PF02472 Biopolymer transport protein ExbD/TolR CMCT_RS07225 PF04052 TolB amino-terminal domain CMCT_RS07240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CMCT_RS07245 PF00698 Acyl transferase domain CMCT_RS07250 PF01048 Phosphorylase superfamily CMCT_RS07255 PF01171 PP-loop family CMCT_RS07260 PF05681 Fumarate hydratase (Fumerase) CMCT_RS07265 PF05683 Fumarase C-terminus CMCT_RS07270 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) CMCT_RS07275 PF17755 UvrA DNA-binding domain CMCT_RS07275 PF00005 ABC transporter CMCT_RS07275 PF17760 UvrA interaction domain CMCT_RS07290 PF13847 Methyltransferase domain CMCT_RS07295 PF00037 4Fe-4S binding domain CMCT_RS07300 PF00334 Nucleoside diphosphate kinase CMCT_RS07310 PF01783 Ribosomal L32p protein family CMCT_RS07315 PF02504 Fatty acid synthesis protein CMCT_RS07320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CMCT_RS07320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CMCT_RS07330 PF04055 Radical SAM superfamily CMCT_RS07345 PF01207 Dihydrouridine synthase (Dus) CMCT_RS07360 PF02590 Predicted SPOUT methyltransferase CMCT_RS07365 PF17848 Acetyl-coA carboxylase zinc finger domain CMCT_RS07365 PF01039 Carboxyl transferase domain CMCT_RS07370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CMCT_RS07370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMCT_RS07375 PF01645 Conserved region in glutamate synthase CMCT_RS07375 PF01493 GXGXG motif CMCT_RS07375 PF00310 Glutamine amidotransferases class-II CMCT_RS07375 PF04898 Glutamate synthase central domain CMCT_RS07390 PF03841 L-seryl-tRNA selenium transferase CMCT_RS07395 PF09106 Elongation factor SelB, winged helix CMCT_RS07395 PF09105 Elongation factor SelB, winged helix CMCT_RS07395 PF03144 Elongation factor Tu domain 2 CMCT_RS07395 PF09107 Elongation factor SelB, winged helix CMCT_RS07395 PF00009 Elongation factor Tu GTP binding domain CMCT_RS07405 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CMCT_RS07410 PF07690 Major Facilitator Superfamily CMCT_RS07415 PF01725 Ham1 family CMCT_RS07425 PF01568 Molydopterin dinucleotide binding domain CMCT_RS07425 PF18364 Molybdopterin oxidoreductase N-terminal domain CMCT_RS07425 PF00384 Molybdopterin oxidoreductase CMCT_RS07435 PF03453 MoeA N-terminal region (domain I and II) CMCT_RS07435 PF00994 Probable molybdopterin binding domain CMCT_RS07435 PF03454 MoeA C-terminal region (domain IV) CMCT_RS07445 PF02391 MoaE protein CMCT_RS07460 PF00749 tRNA synthetases class I (E and Q), catalytic domain CMCT_RS07465 PF00390 Malic enzyme, N-terminal domain CMCT_RS07465 PF03949 Malic enzyme, NAD binding domain CMCT_RS07465 PF01515 Phosphate acetyl/butaryl transferase CMCT_RS07475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CMCT_RS07475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMCT_RS07480 PF02664 S-Ribosylhomocysteinase (LuxS) CMCT_RS07505 PF01546 Peptidase family M20/M25/M40 CMCT_RS07505 PF07687 Peptidase dimerisation domain CMCT_RS07510 PF01546 Peptidase family M20/M25/M40 CMCT_RS07510 PF07687 Peptidase dimerisation domain CMCT_RS07515 PF03575 Peptidase family S51 CMCT_RS07520 PF03606 C4-dicarboxylate anaerobic carrier CMCT_RS07525 PF07687 Peptidase dimerisation domain CMCT_RS07525 PF01546 Peptidase family M20/M25/M40 CMCT_RS07530 PF16653 Saccharopine dehydrogenase C-terminal domain CMCT_RS07530 PF03435 Saccharopine dehydrogenase NADP binding domain CMCT_RS07550 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS07550 PF03707 Bacterial signalling protein N terminal repeat CMCT_RS07550 PF00563 EAL domain CMCT_RS07560 PF00563 EAL domain CMCT_RS07560 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS07560 PF03707 Bacterial signalling protein N terminal repeat CMCT_RS07570 PF03061 Thioesterase superfamily CMCT_RS07580 PF02634 FdhD/NarQ family CMCT_RS07590 PF13247 4Fe-4S dicluster domain CMCT_RS07615 PF01568 Molydopterin dinucleotide binding domain CMCT_RS07615 PF00384 Molybdopterin oxidoreductase CMCT_RS07615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CMCT_RS07620 PF01568 Molydopterin dinucleotide binding domain CMCT_RS07620 PF00384 Molybdopterin oxidoreductase CMCT_RS07620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CMCT_RS07625 PF13247 4Fe-4S dicluster domain CMCT_RS07645 PF00005 ABC transporter CMCT_RS07665 PF10634 Fe2+ transport protein CMCT_RS07670 PF03239 Iron permease FTR1 family CMCT_RS07675 PF02541 Ppx/GppA phosphatase family CMCT_RS07680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMCT_RS07680 PF00512 His Kinase A (phospho-acceptor) domain CMCT_RS07680 PF08521 Two-component sensor kinase N-terminal CMCT_RS07685 PF00072 Response regulator receiver domain CMCT_RS07685 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS07695 PF02660 Glycerol-3-phosphate acyltransferase CMCT_RS07710 PF00578 AhpC/TSA family CMCT_RS07710 PF10417 C-terminal domain of 1-Cys peroxiredoxin CMCT_RS07720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CMCT_RS07720 PF04509 CheC-like family CMCT_RS07730 PF00290 Tryptophan synthase alpha chain CMCT_RS07735 PF00291 Pyridoxal-phosphate dependent enzyme CMCT_RS07745 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CMCT_RS07755 PF00591 Glycosyl transferase family, a/b domain CMCT_RS07755 PF00117 Glutamine amidotransferase class-I CMCT_RS07755 PF02885 Glycosyl transferase family, helical bundle domain CMCT_RS07760 PF00425 chorismate binding enzyme CMCT_RS07760 PF04715 Anthranilate synthase component I, N terminal region CMCT_RS07770 PF01751 Toprim domain CMCT_RS07770 PF01396 Topoisomerase DNA binding C4 zinc finger CMCT_RS07770 PF01131 DNA topoisomerase CMCT_RS07775 PF06968 Biotin and Thiamin Synthesis associated domain CMCT_RS07775 PF04055 Radical SAM superfamily CMCT_RS07780 PF04324 BFD-like [2Fe-2S] binding domain CMCT_RS07780 PF01592 NifU-like N terminal domain CMCT_RS07780 PF01106 NifU-like domain CMCT_RS07785 PF00266 Aminotransferase class-V CMCT_RS07800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CMCT_RS07800 PF02142 MGS-like domain CMCT_RS07800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CMCT_RS07815 PF07724 AAA domain (Cdc48 subfamily) CMCT_RS07815 PF10431 C-terminal, D2-small domain, of ClpB protein CMCT_RS07815 PF06689 ClpX C4-type zinc finger CMCT_RS07820 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CMCT_RS07820 PF00132 Bacterial transferase hexapeptide (six repeats) CMCT_RS07825 PF07977 FabA-like domain CMCT_RS07845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CMCT_RS07845 PF18269 T3SS EscN ATPase C-terminal domain CMCT_RS07850 PF01227 GTP cyclohydrolase I CMCT_RS07855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CMCT_RS07855 PF05697 Bacterial trigger factor protein (TF) CMCT_RS07855 PF05698 Bacterial trigger factor protein (TF) C-terminus CMCT_RS07860 PF00574 Clp protease CMCT_RS07870 PF01327 Polypeptide deformylase CMCT_RS07875 PF01078 Magnesium chelatase, subunit ChlI CMCT_RS07875 PF13335 Magnesium chelatase, subunit ChlI C-terminal CMCT_RS07880 PF01256 Carbohydrate kinase CMCT_RS07880 PF03853 YjeF-related protein N-terminus CMCT_RS07885 PF00551 Formyl transferase CMCT_RS07900 PF04851 Type III restriction enzyme, res subunit CMCT_RS07900 PF08774 VRR-NUC domain CMCT_RS07950 PF08245 Mur ligase middle domain CMCT_RS07955 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CMCT_RS07955 PF00953 Glycosyl transferase family 4 CMCT_RS07960 PF01676 Metalloenzyme superfamily CMCT_RS07960 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CMCT_RS07970 PF00550 Phosphopantetheine attachment site CMCT_RS07975 PF00109 Beta-ketoacyl synthase, N-terminal domain CMCT_RS07975 PF02801 Beta-ketoacyl synthase, C-terminal domain CMCT_RS07980 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CMCT_RS08015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CMCT_RS08020 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS08025 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS08030 PF00005 ABC transporter CMCT_RS08035 PF00005 ABC transporter CMCT_RS08040 PF01042 Endoribonuclease L-PSP CMCT_RS08055 PF03480 Bacterial extracellular solute-binding protein, family 7 CMCT_RS08065 PF05681 Fumarate hydratase (Fumerase) CMCT_RS08070 PF01595 Cyclin M transmembrane N-terminal domain CMCT_RS08070 PF03471 Transporter associated domain CMCT_RS08070 PF00571 CBS domain CMCT_RS08075 PF02110 Hydroxyethylthiazole kinase family CMCT_RS08085 PF08534 Redoxin CMCT_RS08100 PF02261 Aspartate decarboxylase CMCT_RS08105 PF08245 Mur ligase middle domain CMCT_RS08105 PF02875 Mur ligase family, glutamate ligase domain CMCT_RS08115 PF01106 NifU-like domain CMCT_RS08120 PF02272 DHHA1 domain CMCT_RS08120 PF01368 DHH family CMCT_RS08120 PF17768 RecJ OB domain CMCT_RS08125 PF00117 Glutamine amidotransferase class-I CMCT_RS08125 PF06418 CTP synthase N-terminus CMCT_RS08130 PF02384 N-6 DNA Methylase CMCT_RS08140 PF00033 Cytochrome b/b6/petB CMCT_RS08140 PF00032 Cytochrome b(C-terminal)/b6/petD CMCT_RS08145 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CMCT_RS08145 PF00355 Rieske [2Fe-2S] domain CMCT_RS08155 PF03601 Conserved hypothetical protein 698 CMCT_RS08160 PF03485 Arginyl tRNA synthetase N terminal domain CMCT_RS08160 PF00750 tRNA synthetases class I (R) CMCT_RS08160 PF05746 DALR anticodon binding domain CMCT_RS08165 PF02416 mttA/Hcf106 family CMCT_RS08170 PF00625 Guanylate kinase CMCT_RS08180 PF01311 Bacterial export proteins, family 1 CMCT_RS08185 PF00005 ABC transporter CMCT_RS08190 PF00889 Elongation factor TS CMCT_RS08195 PF00318 Ribosomal protein S2 CMCT_RS08200 PF00672 HAMP domain CMCT_RS08200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS08200 PF17200 Single Cache domain 2 CMCT_RS08215 PF08275 DNA primase catalytic core, N-terminal domain CMCT_RS08215 PF01807 CHC2 zinc finger CMCT_RS08225 PF00075 RNase H CMCT_RS08230 PF00035 Double-stranded RNA binding motif CMCT_RS08230 PF14622 Ribonuclease-III-like CMCT_RS08235 PF01264 Chorismate synthase CMCT_RS08240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CMCT_RS08240 PF03459 TOBE domain CMCT_RS08245 PF00672 HAMP domain CMCT_RS08245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS08245 PF02743 Cache domain CMCT_RS08255 PF00920 Dehydratase family CMCT_RS08270 PF01967 MoaC family CMCT_RS08275 PF00916 Sulfate permease family CMCT_RS08275 PF01740 STAS domain CMCT_RS08280 PF00460 Flagella basal body rod protein CMCT_RS08280 PF07559 Flagellar basal body protein FlaE CMCT_RS08280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CMCT_RS08285 PF03963 Flagellar hook capping protein - N-terminal region CMCT_RS08285 PF13860 FlgD Ig-like domain CMCT_RS08285 PF13861 FlgD Tudor-like domain CMCT_RS08305 PF02511 Thymidylate synthase complementing protein CMCT_RS08315 PF01568 Molydopterin dinucleotide binding domain CMCT_RS08315 PF00384 Molybdopterin oxidoreductase CMCT_RS08315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CMCT_RS08320 PF01568 Molydopterin dinucleotide binding domain CMCT_RS08320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CMCT_RS08320 PF00384 Molybdopterin oxidoreductase CMCT_RS08330 PF00072 Response regulator receiver domain CMCT_RS08330 PF00486 Transcriptional regulatory protein, C terminal CMCT_RS08335 PF03264 NapC/NirT cytochrome c family, N-terminal region CMCT_RS08365 PF01261 Xylose isomerase-like TIM barrel CMCT_RS08370 PF06965 Na+/H+ antiporter 1 CMCT_RS08375 PF06965 Na+/H+ antiporter 1 CMCT_RS08380 PF02678 Pirin CMCT_RS08380 PF05726 Pirin C-terminal cupin domain CMCT_RS08395 PF17757 UvrB interaction domain CMCT_RS08395 PF04851 Type III restriction enzyme, res subunit CMCT_RS08395 PF12344 Ultra-violet resistance protein B CMCT_RS08395 PF00271 Helicase conserved C-terminal domain CMCT_RS08395 PF02151 UvrB/uvrC motif CMCT_RS08405 PF00171 Aldehyde dehydrogenase family CMCT_RS08410 PF03807 NADP oxidoreductase coenzyme F420-dependent CMCT_RS08410 PF14748 Pyrroline-5-carboxylate reductase dimerisation CMCT_RS08420 PF01219 Prokaryotic diacylglycerol kinase CMCT_RS08425 PF03372 Endonuclease/Exonuclease/phosphatase family CMCT_RS08435 PF02472 Biopolymer transport protein ExbD/TolR CMCT_RS08440 PF01618 MotA/TolQ/ExbB proton channel family CMCT_RS08445 PF07715 TonB-dependent Receptor Plug Domain CMCT_RS08445 PF00593 TonB dependent receptor CMCT_RS08455 PF08402 TOBE domain CMCT_RS08455 PF00005 ABC transporter CMCT_RS08460 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS08465 PF13416 Bacterial extracellular solute-binding protein CMCT_RS08470 PF02659 Putative manganese efflux pump CMCT_RS08490 PF00950 ABC 3 transport family CMCT_RS08495 PF00005 ABC transporter CMCT_RS08505 PF01297 Zinc-uptake complex component A periplasmic CMCT_RS08515 PF13649 Methyltransferase domain CMCT_RS08520 PF03150 Di-haem cytochrome c peroxidase CMCT_RS08520 PF00034 Cytochrome c CMCT_RS08525 PF08495 FIST N domain CMCT_RS08525 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS08525 PF00563 EAL domain CMCT_RS08525 PF10442 FIST C domain CMCT_RS08530 PF00004 ATPase family associated with various cellular activities (AAA) CMCT_RS08530 PF17862 AAA+ lid domain CMCT_RS08530 PF01434 Peptidase family M41 CMCT_RS08535 PF00501 AMP-binding enzyme CMCT_RS08535 PF13193 AMP-binding enzyme C-terminal domain CMCT_RS08545 PF00557 Metallopeptidase family M24 CMCT_RS08550 PF00344 SecY translocase CMCT_RS08555 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CMCT_RS08560 PF03719 Ribosomal protein S5, C-terminal domain CMCT_RS08560 PF00333 Ribosomal protein S5, N-terminal domain CMCT_RS08565 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CMCT_RS08570 PF00347 Ribosomal protein L6 CMCT_RS08575 PF00410 Ribosomal protein S8 CMCT_RS08580 PF00253 Ribosomal protein S14p/S29e CMCT_RS08585 PF00281 Ribosomal protein L5 CMCT_RS08585 PF00673 ribosomal L5P family C-terminus CMCT_RS08590 PF00467 KOW motif CMCT_RS08590 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CMCT_RS08595 PF00238 Ribosomal protein L14p/L23e CMCT_RS08600 PF00366 Ribosomal protein S17 CMCT_RS08605 PF00831 Ribosomal L29 protein CMCT_RS08610 PF00252 Ribosomal protein L16p/L10e CMCT_RS08615 PF07650 KH domain CMCT_RS08615 PF00189 Ribosomal protein S3, C-terminal domain CMCT_RS08620 PF00237 Ribosomal protein L22p/L17e CMCT_RS08625 PF00203 Ribosomal protein S19 CMCT_RS08630 PF00181 Ribosomal Proteins L2, RNA binding domain CMCT_RS08630 PF03947 Ribosomal Proteins L2, C-terminal domain CMCT_RS08635 PF00276 Ribosomal protein L23 CMCT_RS08640 PF00573 Ribosomal protein L4/L1 family CMCT_RS08645 PF00297 Ribosomal protein L3 CMCT_RS08650 PF00338 Ribosomal protein S10p/S20e CMCT_RS08655 PF02785 Biotin carboxylase C-terminal domain CMCT_RS08655 PF00289 Biotin carboxylase, N-terminal domain CMCT_RS08655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CMCT_RS08670 PF01252 Signal peptidase (SPase) II CMCT_RS08675 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CMCT_RS08675 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CMCT_RS08675 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CMCT_RS08675 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CMCT_RS08680 PF01649 Ribosomal protein S20 CMCT_RS08685 PF00472 RF-1 domain CMCT_RS08685 PF03462 PCRF domain CMCT_RS08715 PF00497 Bacterial extracellular solute-binding proteins, family 3 CMCT_RS08720 PF00528 Binding-protein-dependent transport system inner membrane component CMCT_RS08725 PF00005 ABC transporter CMCT_RS08730 PF01053 Cys/Met metabolism PLP-dependent enzyme CMCT_RS08760 PF08267 Cobalamin-independent synthase, N-terminal domain CMCT_RS08760 PF01717 Cobalamin-independent synthase, Catalytic domain CMCT_RS08765 PF01632 Ribosomal protein L35 CMCT_RS08770 PF00453 Ribosomal protein L20 CMCT_RS08775 PF00460 Flagella basal body rod protein CMCT_RS08775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CMCT_RS08775 PF07559 Flagellar basal body protein FlaE CMCT_RS08775 PF07196 Flagellin hook IN motif CMCT_RS08780 PF03553 Na+/H+ antiporter family CMCT_RS08780 PF13726 Na+-H+ antiporter family CMCT_RS08790 PF00156 Phosphoribosyl transferase domain CMCT_RS08795 PF01765 Ribosome recycling factor CMCT_RS08805 PF03840 Preprotein translocase SecG subunit CMCT_RS08810 PF17792 ThiD2 family CMCT_RS08810 PF02581 Thiamine monophosphate synthase CMCT_RS08815 PF01027 Inhibitor of apoptosis-promoting Bax1 CMCT_RS08825 PF00892 EamA-like transporter family CMCT_RS08830 PF12804 MobA-like NTP transferase domain CMCT_RS08835 PF04991 LicD family CMCT_RS08840 PF00484 Carbonic anhydrase CMCT_RS08845 PF00924 Mechanosensitive ion channel CMCT_RS08855 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS08860 PF00990 Diguanylate cyclase, GGDEF domain CMCT_RS08865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CMCT_RS08865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CMCT_RS08870 PF01594 AI-2E family transporter CMCT_RS08885 PF17864 RuvB AAA lid domain CMCT_RS08885 PF05491 RuvB C-terminal winged helix domain CMCT_RS08885 PF05496 Holliday junction DNA helicase RuvB P-loop domain CMCT_RS08920 PF13018 Extended Signal Peptide of Type V secretion system CMCT_RS08920 PF13332 Hemagglutinin repeat CMCT_RS08920 PF04829 Pre-toxin domain with VENN motif CMCT_RS08920 PF05860 haemagglutination activity domain CMCT_RS08970 PF13018 Extended Signal Peptide of Type V secretion system CMCT_RS08970 PF13332 Hemagglutinin repeat CMCT_RS08970 PF05860 haemagglutination activity domain CMCT_RS08970 PF04829 Pre-toxin domain with VENN motif CMCT_RS08975 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CMCT_RS08975 PF17287 POTRA domain CMCT_RS08975 PF08479 POTRA domain, ShlB-type CMCT_RS08995 PF00677 Lumazine binding domain CMCT_RS09005 PF01435 Peptidase family M48 CMCT_RS09015 PF02673 Bacitracin resistance protein BacA CMCT_RS09045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS09045 PF17202 Single cache domain 3 CMCT_RS09045 PF00672 HAMP domain CMCT_RS09055 PF02780 Transketolase, C-terminal domain CMCT_RS09055 PF02779 Transketolase, pyrimidine binding domain CMCT_RS09055 PF00456 Transketolase, thiamine diphosphate binding domain CMCT_RS09060 PF00348 Polyprenyl synthetase CMCT_RS09070 PF02575 YbaB/EbfC DNA-binding family CMCT_RS09080 PF01176 Translation initiation factor 1A / IF-1 CMCT_RS09085 PF00444 Ribosomal protein L36 CMCT_RS09090 PF00416 Ribosomal protein S13/S18 CMCT_RS09095 PF00411 Ribosomal protein S11 CMCT_RS09100 PF00163 Ribosomal protein S4/S9 N-terminal domain CMCT_RS09100 PF01479 S4 domain CMCT_RS09105 PF01000 RNA polymerase Rpb3/RpoA insert domain CMCT_RS09105 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CMCT_RS09105 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CMCT_RS09110 PF01196 Ribosomal protein L17 CMCT_RS09115 PF01226 Formate/nitrite transporter CMCT_RS09150 PF07977 FabA-like domain CMCT_RS09160 PF00550 Phosphopantetheine attachment site CMCT_RS09165 PF00550 Phosphopantetheine attachment site CMCT_RS09190 PF00109 Beta-ketoacyl synthase, N-terminal domain CMCT_RS09190 PF02801 Beta-ketoacyl synthase, C-terminal domain CMCT_RS09205 PF02801 Beta-ketoacyl synthase, C-terminal domain CMCT_RS09205 PF00109 Beta-ketoacyl synthase, N-terminal domain CMCT_RS09220 PF00672 HAMP domain CMCT_RS09220 PF17200 Single Cache domain 2 CMCT_RS09220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CMCT_RS09230 PF02075 Crossover junction endodeoxyribonuclease RuvC