locus-tag class description CPIN18021_RS00005 PF11638 DnaA N-terminal domain CPIN18021_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CPIN18021_RS00005 PF00308 Bacterial dnaA protein CPIN18021_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CPIN18021_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CPIN18021_RS00010 PF02767 DNA polymerase III beta subunit, central domain CPIN18021_RS00015 PF00204 DNA gyrase B CPIN18021_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN18021_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CPIN18021_RS00015 PF01751 Toprim domain CPIN18021_RS00025 PF14489 QueF-like protein CPIN18021_RS00050 PF01479 S4 domain CPIN18021_RS00050 PF00849 RNA pseudouridylate synthase CPIN18021_RS00055 PF01380 SIS domain CPIN18021_RS00055 PF00571 CBS domain CPIN18021_RS00060 PF00753 Metallo-beta-lactamase superfamily CPIN18021_RS00060 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPIN18021_RS00060 PF17770 Ribonuclease J C-terminal domain CPIN18021_RS00065 PF00398 Ribosomal RNA adenine dimethylase CPIN18021_RS00090 PF04055 Radical SAM superfamily CPIN18021_RS00095 PF00849 RNA pseudouridylate synthase CPIN18021_RS00100 PF00206 Lyase CPIN18021_RS00100 PF10397 Adenylosuccinate lyase C-terminus CPIN18021_RS00105 PF00145 C-5 cytosine-specific DNA methylase CPIN18021_RS00105 PF01381 Helix-turn-helix CPIN18021_RS00115 PF03477 ATP cone domain CPIN18021_RS00115 PF00317 Ribonucleotide reductase, all-alpha domain CPIN18021_RS00115 PF02867 Ribonucleotide reductase, barrel domain CPIN18021_RS00120 PF00884 Sulfatase CPIN18021_RS00120 PF08019 Phosphoethanolamine transferase EptA/EptB CPIN18021_RS00130 PF03477 ATP cone domain CPIN18021_RS00130 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPIN18021_RS00140 PF01297 Zinc-uptake complex component A periplasmic CPIN18021_RS00145 PF03824 High-affinity nickel-transport protein CPIN18021_RS00150 PF00005 ABC transporter CPIN18021_RS00155 PF00950 ABC 3 transport family CPIN18021_RS00165 PF00593 TonB dependent receptor CPIN18021_RS00165 PF07715 TonB-dependent Receptor Plug Domain CPIN18021_RS00170 PF02130 Uncharacterized protein family UPF0054 CPIN18021_RS00175 PF06508 Queuosine biosynthesis protein QueC CPIN18021_RS00180 PF12796 Ankyrin repeats (3 copies) CPIN18021_RS00180 PF00023 Ankyrin repeat CPIN18021_RS00195 PF03063 Prismane/CO dehydrogenase family CPIN18021_RS00200 PF02683 Cytochrome C biogenesis protein transmembrane region CPIN18021_RS00200 PF11412 Disulphide bond corrector protein DsbC CPIN18021_RS00200 PF00085 Thioredoxin CPIN18021_RS00205 PF03239 Iron permease FTR1 family CPIN18021_RS00210 PF10634 Fe2+ transport protein CPIN18021_RS00230 PF02687 FtsX-like permease family CPIN18021_RS00230 PF12704 MacB-like periplasmic core domain CPIN18021_RS00230 PF00005 ABC transporter CPIN18021_RS00245 PF02677 Epoxyqueuosine reductase QueH CPIN18021_RS00250 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CPIN18021_RS00255 PF00857 Isochorismatase family CPIN18021_RS00260 PF14537 Cytochrome c3 CPIN18021_RS00260 PF00890 FAD binding domain CPIN18021_RS00275 PF04264 YceI-like domain CPIN18021_RS00280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPIN18021_RS00280 PF18269 T3SS EscN ATPase C-terminal domain CPIN18021_RS00285 PF01227 GTP cyclohydrolase I CPIN18021_RS00290 PF05697 Bacterial trigger factor protein (TF) CPIN18021_RS00290 PF05698 Bacterial trigger factor protein (TF) C-terminus CPIN18021_RS00290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPIN18021_RS00295 PF00574 Clp protease CPIN18021_RS00305 PF01327 Polypeptide deformylase CPIN18021_RS00310 PF13335 Magnesium chelatase, subunit ChlI C-terminal CPIN18021_RS00310 PF01078 Magnesium chelatase, subunit ChlI CPIN18021_RS00315 PF01256 Carbohydrate kinase CPIN18021_RS00315 PF03853 YjeF-related protein N-terminus CPIN18021_RS00320 PF00551 Formyl transferase CPIN18021_RS00330 PF03741 Integral membrane protein TerC family CPIN18021_RS00340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPIN18021_RS00340 PF02403 Seryl-tRNA synthetase N-terminal domain CPIN18021_RS00345 PF00579 tRNA synthetases class I (W and Y) CPIN18021_RS00350 PF01202 Shikimate kinase CPIN18021_RS00355 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CPIN18021_RS00355 PF01926 50S ribosome-binding GTPase CPIN18021_RS00365 PF00793 DAHP synthetase I family CPIN18021_RS00370 PF00885 6,7-dimethyl-8-ribityllumazine synthase CPIN18021_RS00375 PF01029 NusB family CPIN18021_RS00380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPIN18021_RS00385 PF00005 ABC transporter CPIN18021_RS00410 PF05681 Fumarate hydratase (Fumerase) CPIN18021_RS00435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPIN18021_RS00435 PF00289 Biotin carboxylase, N-terminal domain CPIN18021_RS00435 PF02785 Biotin carboxylase C-terminal domain CPIN18021_RS00440 PF00364 Biotin-requiring enzyme CPIN18021_RS00445 PF00692 dUTPase CPIN18021_RS00450 PF02719 Polysaccharide biosynthesis protein CPIN18021_RS00455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPIN18021_RS00460 PF02348 Cytidylyltransferase CPIN18021_RS00470 PF02110 Hydroxyethylthiazole kinase family CPIN18021_RS00480 PF00338 Ribosomal protein S10p/S20e CPIN18021_RS00485 PF00297 Ribosomal protein L3 CPIN18021_RS00490 PF00573 Ribosomal protein L4/L1 family CPIN18021_RS00495 PF00276 Ribosomal protein L23 CPIN18021_RS00500 PF00181 Ribosomal Proteins L2, RNA binding domain CPIN18021_RS00500 PF03947 Ribosomal Proteins L2, C-terminal domain CPIN18021_RS00505 PF00203 Ribosomal protein S19 CPIN18021_RS00510 PF00237 Ribosomal protein L22p/L17e CPIN18021_RS00515 PF00189 Ribosomal protein S3, C-terminal domain CPIN18021_RS00515 PF07650 KH domain CPIN18021_RS00520 PF00252 Ribosomal protein L16p/L10e CPIN18021_RS00525 PF00831 Ribosomal L29 protein CPIN18021_RS00530 PF00366 Ribosomal protein S17 CPIN18021_RS00535 PF00238 Ribosomal protein L14p/L23e CPIN18021_RS00540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CPIN18021_RS00540 PF00467 KOW motif CPIN18021_RS00545 PF00281 Ribosomal protein L5 CPIN18021_RS00545 PF00673 ribosomal L5P family C-terminus CPIN18021_RS00550 PF00253 Ribosomal protein S14p/S29e CPIN18021_RS00555 PF00410 Ribosomal protein S8 CPIN18021_RS00560 PF00347 Ribosomal protein L6 CPIN18021_RS00565 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CPIN18021_RS00570 PF00333 Ribosomal protein S5, N-terminal domain CPIN18021_RS00570 PF03719 Ribosomal protein S5, C-terminal domain CPIN18021_RS00575 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CPIN18021_RS00580 PF00344 SecY translocase CPIN18021_RS00585 PF00557 Metallopeptidase family M24 CPIN18021_RS00590 PF02743 Cache domain CPIN18021_RS00590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN18021_RS00590 PF00672 HAMP domain CPIN18021_RS00595 PF17202 Single cache domain 3 CPIN18021_RS00595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN18021_RS00595 PF00672 HAMP domain CPIN18021_RS00600 PF07559 Flagellar basal body protein FlaE CPIN18021_RS00600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN18021_RS00600 PF00460 Flagella basal body rod protein CPIN18021_RS00600 PF07196 Flagellin hook IN motif CPIN18021_RS00605 PF05670 NFACT protein RNA binding domain CPIN18021_RS00620 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CPIN18021_RS00620 PF13288 DXP reductoisomerase C-terminal domain CPIN18021_RS00620 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CPIN18021_RS00625 PF00860 Permease family CPIN18021_RS00635 PF00814 Glycoprotease family CPIN18021_RS00640 PF03102 NeuB family CPIN18021_RS00640 PF08666 SAF domain CPIN18021_RS00655 PF09285 Elongation factor P, C-terminal CPIN18021_RS00655 PF01132 Elongation factor P (EF-P) OB domain CPIN18021_RS00655 PF08207 Elongation factor P (EF-P) KOW-like domain CPIN18021_RS00665 PF01197 Ribosomal protein L31 CPIN18021_RS00670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPIN18021_RS00695 PF03447 Homoserine dehydrogenase, NAD binding domain CPIN18021_RS00695 PF00742 Homoserine dehydrogenase CPIN18021_RS00695 PF01842 ACT domain CPIN18021_RS00700 PF02021 Uncharacterised protein family UPF0102 CPIN18021_RS00705 PF00085 Thioredoxin CPIN18021_RS00715 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPIN18021_RS00720 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CPIN18021_RS00725 PF00109 Beta-ketoacyl synthase, N-terminal domain CPIN18021_RS00725 PF02801 Beta-ketoacyl synthase, C-terminal domain CPIN18021_RS00730 PF00550 Phosphopantetheine attachment site CPIN18021_RS00740 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CPIN18021_RS00740 PF01676 Metalloenzyme superfamily CPIN18021_RS00745 PF00953 Glycosyl transferase family 4 CPIN18021_RS00745 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CPIN18021_RS00750 PF08245 Mur ligase middle domain CPIN18021_RS00765 PF03062 MBOAT, membrane-bound O-acyltransferase family CPIN18021_RS00770 PF00152 tRNA synthetases class II (D, K and N) CPIN18021_RS00770 PF01336 OB-fold nucleic acid binding domain CPIN18021_RS00770 PF02938 GAD domain CPIN18021_RS00785 PF11791 Aconitate B N-terminal domain CPIN18021_RS00785 PF00330 Aconitase family (aconitate hydratase) CPIN18021_RS00785 PF06434 Aconitate hydratase 2 N-terminus CPIN18021_RS00795 PF00106 short chain dehydrogenase CPIN18021_RS00800 PF03553 Na+/H+ antiporter family CPIN18021_RS00805 PF05958 tRNA (Uracil-5-)-methyltransferase CPIN18021_RS00810 PF13380 CoA binding domain CPIN18021_RS00815 PF13291 ACT domain CPIN18021_RS00815 PF00291 Pyridoxal-phosphate dependent enzyme CPIN18021_RS00825 PF01592 NifU-like N terminal domain CPIN18021_RS00825 PF01106 NifU-like domain CPIN18021_RS00825 PF04324 BFD-like [2Fe-2S] binding domain CPIN18021_RS00830 PF00266 Aminotransferase class-V CPIN18021_RS00835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN18021_RS00835 PF16591 Helical bimodular sensor domain CPIN18021_RS00835 PF00672 HAMP domain CPIN18021_RS00840 PF02621 Menaquinone biosynthesis CPIN18021_RS00845 PF01313 Bacterial export proteins, family 3 CPIN18021_RS00850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CPIN18021_RS00860 PF02132 RecR protein CPIN18021_RS00860 PF13662 Toprim domain CPIN18021_RS00870 PF00072 Response regulator receiver domain CPIN18021_RS00870 PF00486 Transcriptional regulatory protein, C terminal CPIN18021_RS00875 PF00005 ABC transporter CPIN18021_RS00875 PF12848 ABC transporter CPIN18021_RS00880 PF16326 ABC transporter C-terminal domain CPIN18021_RS00880 PF12848 ABC transporter CPIN18021_RS00880 PF00005 ABC transporter CPIN18021_RS00885 PF03461 TRCF domain CPIN18021_RS00885 PF00271 Helicase conserved C-terminal domain CPIN18021_RS00885 PF00270 DEAD/DEAH box helicase CPIN18021_RS00885 PF02559 CarD-like/TRCF domain CPIN18021_RS00885 PF17757 UvrB interaction domain CPIN18021_RS00900 PF00291 Pyridoxal-phosphate dependent enzyme CPIN18021_RS00905 PF00132 Bacterial transferase hexapeptide (six repeats) CPIN18021_RS00950 PF07498 Rho termination factor, N-terminal domain CPIN18021_RS00950 PF07497 Rho termination factor, RNA-binding domain CPIN18021_RS00950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPIN18021_RS00955 PF01219 Prokaryotic diacylglycerol kinase CPIN18021_RS00960 PF06965 Na+/H+ antiporter 1 CPIN18021_RS00965 PF00884 Sulfatase CPIN18021_RS00970 PF03466 LysR substrate binding domain CPIN18021_RS00970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPIN18021_RS00975 PF14537 Cytochrome c3 CPIN18021_RS00975 PF00890 FAD binding domain CPIN18021_RS00980 PF14537 Cytochrome c3 CPIN18021_RS00980 PF00890 FAD binding domain CPIN18021_RS00990 PF03264 NapC/NirT cytochrome c family, N-terminal region CPIN18021_RS01000 PF01176 Translation initiation factor 1A / IF-1 CPIN18021_RS01005 PF00444 Ribosomal protein L36 CPIN18021_RS01010 PF00416 Ribosomal protein S13/S18 CPIN18021_RS01015 PF00411 Ribosomal protein S11 CPIN18021_RS01020 PF01479 S4 domain CPIN18021_RS01020 PF00163 Ribosomal protein S4/S9 N-terminal domain CPIN18021_RS01025 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CPIN18021_RS01025 PF01000 RNA polymerase Rpb3/RpoA insert domain CPIN18021_RS01025 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CPIN18021_RS01030 PF01196 Ribosomal protein L17 CPIN18021_RS01035 PF10615 Protein of unknown function (DUF2470) CPIN18021_RS01035 PF01243 Pyridoxamine 5'-phosphate oxidase CPIN18021_RS01045 PF01464 Transglycosylase SLT domain CPIN18021_RS01045 PF01551 Peptidase family M23 CPIN18021_RS01045 PF10145 Phage-related minor tail protein CPIN18021_RS01050 PF03448 MgtE intracellular N domain CPIN18021_RS01050 PF00571 CBS domain CPIN18021_RS01050 PF01769 Divalent cation transporter CPIN18021_RS01055 PF00293 NUDIX domain CPIN18021_RS01065 PF00384 Molybdopterin oxidoreductase CPIN18021_RS01065 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS01065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN18021_RS01070 PF00384 Molybdopterin oxidoreductase CPIN18021_RS01070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN18021_RS01070 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS01080 PF16193 AAA C-terminal domain CPIN18021_RS01080 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPIN18021_RS01080 PF12002 MgsA AAA+ ATPase C terminal CPIN18021_RS01080 PF01661 Macro domain CPIN18021_RS01085 PF01967 MoaC family CPIN18021_RS01100 PF03652 Holliday junction resolvase CPIN18021_RS01105 PF00005 ABC transporter CPIN18021_RS01145 PF14743 DNA ligase OB-like domain CPIN18021_RS01145 PF01068 ATP dependent DNA ligase domain CPIN18021_RS01150 PF02253 Phospholipase A1 CPIN18021_RS01155 PF12804 MobA-like NTP transferase domain CPIN18021_RS01170 PF13722 5TM C-terminal transporter carbon starvation CstA CPIN18021_RS01170 PF02554 Carbon starvation protein CstA CPIN18021_RS01180 PF02374 Anion-transporting ATPase CPIN18021_RS01185 PF07690 Major Facilitator Superfamily CPIN18021_RS01325 PF02899 Phage integrase, N-terminal SAM-like domain CPIN18021_RS01325 PF00589 Phage integrase family CPIN18021_RS01395 PF13356 Arm DNA-binding domain CPIN18021_RS01395 PF14659 Phage integrase, N-terminal SAM-like domain CPIN18021_RS01395 PF00589 Phage integrase family CPIN18021_RS01650 PF00717 Peptidase S24-like CPIN18021_RS01650 PF01726 LexA DNA binding domain CPIN18021_RS01755 PF00436 Single-strand binding protein family CPIN18021_RS01775 PF10549 ORF11CD3 domain CPIN18021_RS01775 PF09669 Phage regulatory protein Rha (Phage_pRha) CPIN18021_RS01785 PF13356 Arm DNA-binding domain CPIN18021_RS01785 PF00589 Phage integrase family CPIN18021_RS01800 PF02548 Ketopantoate hydroxymethyltransferase CPIN18021_RS01810 PF13302 Acetyltransferase (GNAT) domain CPIN18021_RS01815 PF13247 4Fe-4S dicluster domain CPIN18021_RS01820 PF00361 Proton-conducting membrane transporter CPIN18021_RS01825 PF00146 NADH dehydrogenase CPIN18021_RS01830 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CPIN18021_RS01835 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPIN18021_RS01835 PF00361 Proton-conducting membrane transporter CPIN18021_RS01840 PF00374 Nickel-dependent hydrogenase CPIN18021_RS01840 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CPIN18021_RS01840 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CPIN18021_RS01850 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CPIN18021_RS01865 PF01226 Formate/nitrite transporter CPIN18021_RS01875 PF02600 Disulfide bond formation protein DsbB CPIN18021_RS01880 PF01323 DSBA-like thioredoxin domain CPIN18021_RS01885 PF05935 Arylsulfotransferase (ASST) CPIN18021_RS01885 PF17425 Arylsulfotransferase Ig-like domain CPIN18021_RS01900 PF00380 Ribosomal protein S9/S16 CPIN18021_RS01905 PF00572 Ribosomal protein L13 CPIN18021_RS01910 PF12705 PD-(D/E)XK nuclease superfamily CPIN18021_RS01910 PF00580 UvrD/REP helicase N-terminal domain CPIN18021_RS01910 PF13361 UvrD-like helicase C-terminal domain CPIN18021_RS01935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CPIN18021_RS01935 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CPIN18021_RS01950 PF00115 Cytochrome C and Quinol oxidase polypeptide I CPIN18021_RS01955 PF02384 N-6 DNA Methylase CPIN18021_RS01960 PF01420 Type I restriction modification DNA specificity domain CPIN18021_RS01970 PF00117 Glutamine amidotransferase class-I CPIN18021_RS01970 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPIN18021_RS01980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN18021_RS01980 PF08447 PAS fold CPIN18021_RS01980 PF08448 PAS fold CPIN18021_RS01985 PF00072 Response regulator receiver domain CPIN18021_RS01985 PF00486 Transcriptional regulatory protein, C terminal CPIN18021_RS02005 PF17755 UvrA DNA-binding domain CPIN18021_RS02005 PF00005 ABC transporter CPIN18021_RS02005 PF17760 UvrA interaction domain CPIN18021_RS02020 PF00037 4Fe-4S binding domain CPIN18021_RS02025 PF00334 Nucleoside diphosphate kinase CPIN18021_RS02035 PF01783 Ribosomal L32p protein family CPIN18021_RS02040 PF02504 Fatty acid synthesis protein CPIN18021_RS02045 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPIN18021_RS02045 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPIN18021_RS02055 PF00762 Ferrochelatase CPIN18021_RS02060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPIN18021_RS02060 PF01411 tRNA synthetases class II (A) CPIN18021_RS02060 PF02272 DHHA1 domain CPIN18021_RS02070 PF02545 Maf-like protein CPIN18021_RS02075 PF17092 Penicillin-binding protein OB-like domain CPIN18021_RS02075 PF00912 Transglycosylase CPIN18021_RS02075 PF00905 Penicillin binding protein transpeptidase domain CPIN18021_RS02080 PF01063 Amino-transferase class IV CPIN18021_RS02085 PF00425 chorismate binding enzyme CPIN18021_RS02105 PF03144 Elongation factor Tu domain 2 CPIN18021_RS02105 PF00009 Elongation factor Tu GTP binding domain CPIN18021_RS02105 PF00679 Elongation factor G C-terminus CPIN18021_RS02105 PF03764 Elongation factor G, domain IV CPIN18021_RS02105 PF14492 Elongation Factor G, domain II CPIN18021_RS02110 PF00177 Ribosomal protein S7p/S5e CPIN18021_RS02115 PF00164 Ribosomal protein S12/S23 CPIN18021_RS02120 PF00440 Bacterial regulatory proteins, tetR family CPIN18021_RS02130 PF01165 Ribosomal protein S21 CPIN18021_RS02145 PF03738 Glutathionylspermidine synthase preATP-grasp CPIN18021_RS02150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPIN18021_RS02150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPIN18021_RS02155 PF04461 Protein of unknown function (DUF520) CPIN18021_RS02160 PF04055 Radical SAM superfamily CPIN18021_RS02160 PF06969 HemN C-terminal domain CPIN18021_RS02180 PF00384 Molybdopterin oxidoreductase CPIN18021_RS02180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN18021_RS02180 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS02185 PF12838 4Fe-4S dicluster domain CPIN18021_RS02190 PF12801 4Fe-4S binding domain CPIN18021_RS02190 PF12837 4Fe-4S binding domain CPIN18021_RS02195 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CPIN18021_RS02215 PF00210 Ferritin-like domain CPIN18021_RS02230 PF05736 OprF membrane domain CPIN18021_RS02230 PF00691 OmpA family CPIN18021_RS02235 PF13419 Haloacid dehalogenase-like hydrolase CPIN18021_RS02240 PF03625 Domain of unknown function DUF302 CPIN18021_RS02240 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPIN18021_RS02245 PF01370 NAD dependent epimerase/dehydratase family CPIN18021_RS02250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPIN18021_RS02255 PF00005 ABC transporter CPIN18021_RS02255 PF02687 FtsX-like permease family CPIN18021_RS02255 PF12704 MacB-like periplasmic core domain CPIN18021_RS02260 PF00114 Pilin (bacterial filament) CPIN18021_RS02260 PF07963 Prokaryotic N-terminal methylation motif CPIN18021_RS02275 PF00512 His Kinase A (phospho-acceptor) domain CPIN18021_RS02275 PF07689 KaiB domain CPIN18021_RS02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN18021_RS02280 PF00486 Transcriptional regulatory protein, C terminal CPIN18021_RS02280 PF00072 Response regulator receiver domain CPIN18021_RS02285 PF03916 Polysulphide reductase, NrfD CPIN18021_RS02290 PF13247 4Fe-4S dicluster domain CPIN18021_RS02295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN18021_RS02295 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS02295 PF10518 TAT (twin-arginine translocation) pathway signal sequence CPIN18021_RS02295 PF00384 Molybdopterin oxidoreductase CPIN18021_RS02310 PF01678 Diaminopimelate epimerase CPIN18021_RS02315 PF01121 Dephospho-CoA kinase CPIN18021_RS02320 PF00586 AIR synthase related protein, N-terminal domain CPIN18021_RS02320 PF02769 AIR synthase related protein, C-terminal domain CPIN18021_RS02325 PF01648 4'-phosphopantetheinyl transferase superfamily CPIN18021_RS02330 PF03748 Flagellar basal body-associated protein FliL CPIN18021_RS02335 PF03900 Porphobilinogen deaminase, C-terminal domain CPIN18021_RS02335 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CPIN18021_RS02350 PF03129 Anticodon binding domain CPIN18021_RS02350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPIN18021_RS02350 PF04073 Aminoacyl-tRNA editing domain CPIN18021_RS02355 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CPIN18021_RS02355 PF01488 Shikimate / quinate 5-dehydrogenase CPIN18021_RS02355 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CPIN18021_RS02360 PF00348 Polyprenyl synthetase CPIN18021_RS02370 PF13419 Haloacid dehalogenase-like hydrolase CPIN18021_RS02380 PF00460 Flagella basal body rod protein CPIN18021_RS02380 PF07559 Flagellar basal body protein FlaE CPIN18021_RS02380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN18021_RS02395 PF00009 Elongation factor Tu GTP binding domain CPIN18021_RS02395 PF03144 Elongation factor Tu domain 2 CPIN18021_RS02395 PF00679 Elongation factor G C-terminus CPIN18021_RS02410 PF00156 Phosphoribosyl transferase domain CPIN18021_RS02415 PF00860 Permease family CPIN18021_RS02420 PF04055 Radical SAM superfamily CPIN18021_RS02430 PF01380 SIS domain CPIN18021_RS02435 PF01625 Peptide methionine sulfoxide reductase CPIN18021_RS02435 PF01641 SelR domain CPIN18021_RS02440 PF01012 Electron transfer flavoprotein domain CPIN18021_RS02445 PF01012 Electron transfer flavoprotein domain CPIN18021_RS02445 PF00766 Electron transfer flavoprotein FAD-binding domain CPIN18021_RS02450 PF00378 Enoyl-CoA hydratase/isomerase CPIN18021_RS02460 PF07859 alpha/beta hydrolase fold CPIN18021_RS02465 PF02028 BCCT, betaine/carnitine/choline family transporter CPIN18021_RS02470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPIN18021_RS02470 PF02770 Acyl-CoA dehydrogenase, middle domain CPIN18021_RS02470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPIN18021_RS02475 PF02515 CoA-transferase family III CPIN18021_RS02480 PF13193 AMP-binding enzyme C-terminal domain CPIN18021_RS02480 PF00501 AMP-binding enzyme CPIN18021_RS02485 PF01494 FAD binding domain CPIN18021_RS02525 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPIN18021_RS02530 PF03949 Malic enzyme, NAD binding domain CPIN18021_RS02530 PF01515 Phosphate acetyl/butaryl transferase CPIN18021_RS02530 PF00390 Malic enzyme, N-terminal domain CPIN18021_RS02540 PF01018 GTP1/OBG CPIN18021_RS02540 PF01926 50S ribosome-binding GTPase CPIN18021_RS02560 PF14743 DNA ligase OB-like domain CPIN18021_RS02560 PF01068 ATP dependent DNA ligase domain CPIN18021_RS02565 PF02253 Phospholipase A1 CPIN18021_RS02570 PF12804 MobA-like NTP transferase domain CPIN18021_RS02590 PF14572 Phosphoribosyl synthetase-associated domain CPIN18021_RS02590 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPIN18021_RS02595 PF04055 Radical SAM superfamily CPIN18021_RS02610 PF04073 Aminoacyl-tRNA editing domain CPIN18021_RS02615 PF00449 Urease alpha-subunit, N-terminal domain CPIN18021_RS02615 PF01979 Amidohydrolase family CPIN18021_RS02620 PF00699 Urease beta subunit CPIN18021_RS02620 PF00547 Urease, gamma subunit CPIN18021_RS02625 PF00547 Urease, gamma subunit CPIN18021_RS02630 PF01774 UreD urease accessory protein CPIN18021_RS02635 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPIN18021_RS02640 PF01730 UreF CPIN18021_RS02645 PF02814 UreE urease accessory protein, N-terminal domain CPIN18021_RS02645 PF05194 UreE urease accessory protein, C-terminal domain CPIN18021_RS02650 PF01638 HxlR-like helix-turn-helix CPIN18021_RS02655 PF00465 Iron-containing alcohol dehydrogenase CPIN18021_RS02665 PF00881 Nitroreductase family CPIN18021_RS02675 PF04055 Radical SAM superfamily CPIN18021_RS02675 PF06968 Biotin and Thiamin Synthesis associated domain CPIN18021_RS02705 PF02256 Iron hydrogenase small subunit CPIN18021_RS02705 PF12838 4Fe-4S dicluster domain CPIN18021_RS02705 PF02906 Iron only hydrogenase large subunit, C-terminal domain CPIN18021_RS02715 PF00384 Molybdopterin oxidoreductase CPIN18021_RS02715 PF18364 Molybdopterin oxidoreductase N-terminal domain CPIN18021_RS02715 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS02720 PF02906 Iron only hydrogenase large subunit, C-terminal domain CPIN18021_RS02720 PF00037 4Fe-4S binding domain CPIN18021_RS02735 PF06968 Biotin and Thiamin Synthesis associated domain CPIN18021_RS02735 PF04055 Radical SAM superfamily CPIN18021_RS02740 PF04055 Radical SAM superfamily CPIN18021_RS02740 PF06968 Biotin and Thiamin Synthesis associated domain CPIN18021_RS02745 PF10396 GTP-binding protein TrmE N-terminus CPIN18021_RS02745 PF12631 MnmE helical domain CPIN18021_RS02745 PF01926 50S ribosome-binding GTPase CPIN18021_RS02750 PF01396 Topoisomerase DNA binding C4 zinc finger CPIN18021_RS02750 PF01751 Toprim domain CPIN18021_RS02750 PF01131 DNA topoisomerase CPIN18021_RS02760 PF03605 Anaerobic c4-dicarboxylate membrane transporter CPIN18021_RS02765 PF01032 FecCD transport family CPIN18021_RS02770 PF00005 ABC transporter CPIN18021_RS02775 PF01497 Periplasmic binding protein CPIN18021_RS02780 PF04055 Radical SAM superfamily CPIN18021_RS02790 PF00318 Ribosomal protein S2 CPIN18021_RS02795 PF00889 Elongation factor TS CPIN18021_RS02800 PF00005 ABC transporter CPIN18021_RS02805 PF01311 Bacterial export proteins, family 1 CPIN18021_RS02815 PF00625 Guanylate kinase CPIN18021_RS02820 PF02416 mttA/Hcf106 family CPIN18021_RS02825 PF03485 Arginyl tRNA synthetase N terminal domain CPIN18021_RS02825 PF05746 DALR anticodon binding domain CPIN18021_RS02825 PF00750 tRNA synthetases class I (R) CPIN18021_RS02830 PF03601 Conserved hypothetical protein 698 CPIN18021_RS02840 PF00355 Rieske [2Fe-2S] domain CPIN18021_RS02840 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CPIN18021_RS02845 PF00032 Cytochrome b(C-terminal)/b6/petD CPIN18021_RS02845 PF00033 Cytochrome b/b6/petB CPIN18021_RS02855 PF02630 SCO1/SenC CPIN18021_RS02880 PF00842 Alanine racemase, C-terminal domain CPIN18021_RS02880 PF01168 Alanine racemase, N-terminal domain CPIN18021_RS02890 PF01556 DnaJ C terminal domain CPIN18021_RS02890 PF00684 DnaJ central domain CPIN18021_RS02890 PF00226 DnaJ domain CPIN18021_RS02905 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPIN18021_RS02905 PF00476 DNA polymerase family A CPIN18021_RS02905 PF01367 5'-3' exonuclease, C-terminal SAM fold CPIN18021_RS02915 PF03951 Glutamine synthetase, beta-Grasp domain CPIN18021_RS02915 PF00120 Glutamine synthetase, catalytic domain CPIN18021_RS02925 PF01136 Peptidase family U32 CPIN18021_RS02930 PF00731 AIR carboxylase CPIN18021_RS02940 PF02091 Glycyl-tRNA synthetase alpha subunit CPIN18021_RS02945 PF01784 NIF3 (NGG1p interacting factor 3) CPIN18021_RS02955 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CPIN18021_RS02955 PF00534 Glycosyl transferases group 1 CPIN18021_RS02960 PF00849 RNA pseudouridylate synthase CPIN18021_RS02965 PF00448 SRP54-type protein, GTPase domain CPIN18021_RS02965 PF02978 Signal peptide binding domain CPIN18021_RS02965 PF02881 SRP54-type protein, helical bundle domain CPIN18021_RS02970 PF00886 Ribosomal protein S16 CPIN18021_RS02980 PF01782 RimM N-terminal domain CPIN18021_RS02985 PF01746 tRNA (Guanine-1)-methyltransferase CPIN18021_RS02990 PF01245 Ribosomal protein L19 CPIN18021_RS02995 PF05538 Campylobacter major outer membrane protein CPIN18021_RS03005 PF17425 Arylsulfotransferase Ig-like domain CPIN18021_RS03005 PF05935 Arylsulfotransferase (ASST) CPIN18021_RS03010 PF01323 DSBA-like thioredoxin domain CPIN18021_RS03015 PF02600 Disulfide bond formation protein DsbB CPIN18021_RS03025 PF00072 Response regulator receiver domain CPIN18021_RS03025 PF00486 Transcriptional regulatory protein, C terminal CPIN18021_RS03050 PF00174 Oxidoreductase molybdopterin binding domain CPIN18021_RS03055 PF08241 Methyltransferase domain CPIN18021_RS03060 PF04301 Protein of unknown function (DUF452) CPIN18021_RS03065 PF00155 Aminotransferase class I and II CPIN18021_RS03080 PF00460 Flagella basal body rod protein CPIN18021_RS03080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN18021_RS03085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN18021_RS03085 PF00460 Flagella basal body rod protein CPIN18021_RS03090 PF00140 Sigma-70 factor, region 1.2 CPIN18021_RS03090 PF04539 Sigma-70 region 3 CPIN18021_RS03090 PF04542 Sigma-70 region 2 CPIN18021_RS03090 PF04545 Sigma-70, region 4 CPIN18021_RS03105 PF02660 Glycerol-3-phosphate acyltransferase CPIN18021_RS03115 PF00486 Transcriptional regulatory protein, C terminal CPIN18021_RS03115 PF00072 Response regulator receiver domain CPIN18021_RS03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN18021_RS03120 PF00512 His Kinase A (phospho-acceptor) domain CPIN18021_RS03135 PF02875 Mur ligase family, glutamate ligase domain CPIN18021_RS03135 PF08245 Mur ligase middle domain CPIN18021_RS03150 PF01820 D-ala D-ala ligase N-terminus CPIN18021_RS03150 PF07478 D-ala D-ala ligase C-terminus CPIN18021_RS03155 PF07499 RuvA, C-terminal domain CPIN18021_RS03155 PF01330 RuvA N terminal domain CPIN18021_RS03165 PF03023 Lipid II flippase MurJ CPIN18021_RS03170 PF01406 tRNA synthetases class I (C) catalytic domain CPIN18021_RS03170 PF09190 DALR domain CPIN18021_RS03175 PF00005 ABC transporter CPIN18021_RS03175 PF00664 ABC transporter transmembrane region CPIN18021_RS03180 PF01180 Dihydroorotate dehydrogenase CPIN18021_RS03190 PF00701 Dihydrodipicolinate synthetase family CPIN18021_RS03200 PF01066 CDP-alcohol phosphatidyltransferase CPIN18021_RS03215 PF00708 Acylphosphatase CPIN18021_RS03215 PF01300 Telomere recombination CPIN18021_RS03215 PF07503 HypF finger CPIN18021_RS03215 PF17788 HypF Kae1-like domain CPIN18021_RS03235 PF02348 Cytidylyltransferase CPIN18021_RS03240 PF00291 Pyridoxal-phosphate dependent enzyme CPIN18021_RS03245 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CPIN18021_RS03250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPIN18021_RS03255 PF02540 NAD synthase CPIN18021_RS03260 PF00753 Metallo-beta-lactamase superfamily CPIN18021_RS03325 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CPIN18021_RS03335 PF01142 tRNA pseudouridine synthase D (TruD) CPIN18021_RS03340 PF00586 AIR synthase related protein, N-terminal domain CPIN18021_RS03340 PF02769 AIR synthase related protein, C-terminal domain CPIN18021_RS03345 PF01925 Sulfite exporter TauE/SafE CPIN18021_RS03355 PF13361 UvrD-like helicase C-terminal domain CPIN18021_RS03355 PF00580 UvrD/REP helicase N-terminal domain CPIN18021_RS03360 PF01509 TruB family pseudouridylate synthase (N terminal domain) CPIN18021_RS03365 PF02599 Global regulator protein family CPIN18021_RS03370 PF00288 GHMP kinases N terminal domain CPIN18021_RS03375 PF01668 SmpB protein CPIN18021_RS03385 PF00460 Flagella basal body rod protein CPIN18021_RS03390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN18021_RS03390 PF00460 Flagella basal body rod protein CPIN18021_RS03395 PF02049 Flagellar hook-basal body complex protein FliE CPIN18021_RS03400 PF03717 Penicillin-binding Protein dimerisation domain CPIN18021_RS03400 PF00905 Penicillin binding protein transpeptidase domain CPIN18021_RS03415 PF08459 UvrC Helix-hairpin-helix N-terminal CPIN18021_RS03415 PF01541 GIY-YIG catalytic domain CPIN18021_RS03415 PF02151 UvrB/uvrC motif CPIN18021_RS03425 PF03600 Citrate transporter CPIN18021_RS03430 PF00117 Glutamine amidotransferase class-I CPIN18021_RS03430 PF00958 GMP synthase C terminal domain CPIN18021_RS03430 PF02540 NAD synthase CPIN18021_RS03455 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CPIN18021_RS03465 PF00005 ABC transporter CPIN18021_RS03465 PF00571 CBS domain CPIN18021_RS03470 PF00528 Binding-protein-dependent transport system inner membrane component CPIN18021_RS03480 PF01467 Cytidylyltransferase-like CPIN18021_RS03485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPIN18021_RS03485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPIN18021_RS03490 PF00162 Phosphoglycerate kinase CPIN18021_RS03495 PF00121 Triosephosphate isomerase CPIN18021_RS03505 PF00209 Sodium:neurotransmitter symporter family CPIN18021_RS03510 PF01554 MatE CPIN18021_RS03520 PF18073 Rubredoxin metal binding domain CPIN18021_RS03525 PF00448 SRP54-type protein, GTPase domain CPIN18021_RS03530 PF08534 Redoxin CPIN18021_RS03540 PF01966 HD domain CPIN18021_RS03540 PF00013 KH domain CPIN18021_RS03540 PF12072 Domain of unknown function (DUF3552) CPIN18021_RS03560 PF00119 ATP synthase A chain CPIN18021_RS03565 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CPIN18021_RS03565 PF02769 AIR synthase related protein, C-terminal domain CPIN18021_RS03565 PF00586 AIR synthase related protein, N-terminal domain CPIN18021_RS03570 PF00226 DnaJ domain CPIN18021_RS03570 PF05099 Tellurite resistance protein TerB CPIN18021_RS03575 PF01808 AICARFT/IMPCHase bienzyme CPIN18021_RS03575 PF02142 MGS-like domain CPIN18021_RS03585 PF00271 Helicase conserved C-terminal domain CPIN18021_RS03585 PF04851 Type III restriction enzyme, res subunit CPIN18021_RS03590 PF00675 Insulinase (Peptidase family M16) CPIN18021_RS03590 PF05193 Peptidase M16 inactive domain CPIN18021_RS03595 PF04055 Radical SAM superfamily CPIN18021_RS03615 PF13090 Polyphosphate kinase C-terminal domain 2 CPIN18021_RS03615 PF02503 Polyphosphate kinase middle domain CPIN18021_RS03615 PF17941 Polyphosphate kinase C-terminal domain 1 CPIN18021_RS03615 PF13089 Polyphosphate kinase N-terminal domain CPIN18021_RS03620 PF00312 Ribosomal protein S15 CPIN18021_RS03635 PF01761 3-dehydroquinate synthase CPIN18021_RS03645 PF00919 Uncharacterized protein family UPF0004 CPIN18021_RS03645 PF04055 Radical SAM superfamily CPIN18021_RS03650 PF00004 ATPase family associated with various cellular activities (AAA) CPIN18021_RS03650 PF01434 Peptidase family M41 CPIN18021_RS03650 PF17862 AAA+ lid domain CPIN18021_RS03655 PF00994 Probable molybdopterin binding domain CPIN18021_RS03660 PF00580 UvrD/REP helicase N-terminal domain CPIN18021_RS03660 PF13361 UvrD-like helicase C-terminal domain CPIN18021_RS03665 PF00012 Hsp70 protein CPIN18021_RS03670 PF01025 GrpE CPIN18021_RS03685 PF03033 Glycosyltransferase family 28 N-terminal domain CPIN18021_RS03685 PF04101 Glycosyltransferase family 28 C-terminal domain CPIN18021_RS03690 PF01098 Cell cycle protein CPIN18021_RS03695 PF00899 ThiF family CPIN18021_RS03695 PF00581 Rhodanese-like domain CPIN18021_RS03700 PF00155 Aminotransferase class I and II CPIN18021_RS03705 PF17944 Arginine decarboxylase C-terminal helical extension CPIN18021_RS03705 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPIN18021_RS03705 PF17810 Arginine decarboxylase helical bundle domain CPIN18021_RS03710 PF13393 Histidyl-tRNA synthetase CPIN18021_RS03710 PF03129 Anticodon binding domain CPIN18021_RS03715 PF02223 Thymidylate kinase CPIN18021_RS03720 PF01467 Cytidylyltransferase-like CPIN18021_RS03725 PF02441 Flavoprotein CPIN18021_RS03740 PF00994 Probable molybdopterin binding domain CPIN18021_RS03740 PF03454 MoeA C-terminal region (domain IV) CPIN18021_RS03740 PF03453 MoeA N-terminal region (domain I and II) CPIN18021_RS03745 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPIN18021_RS03750 PF04305 Protein of unknown function (DUF455) CPIN18021_RS03760 PF12631 MnmE helical domain CPIN18021_RS03760 PF10396 GTP-binding protein TrmE N-terminus CPIN18021_RS03760 PF01926 50S ribosome-binding GTPase CPIN18021_RS03770 PF14849 YidC periplasmic domain CPIN18021_RS03770 PF02096 60Kd inner membrane protein CPIN18021_RS03775 PF01809 Putative membrane protein insertion efficiency factor CPIN18021_RS03780 PF00825 Ribonuclease P CPIN18021_RS03785 PF00468 Ribosomal protein L34 CPIN18021_RS03800 PF03061 Thioesterase superfamily CPIN18021_RS03815 PF02092 Glycyl-tRNA synthetase beta subunit CPIN18021_RS03825 PF00588 SpoU rRNA Methylase family CPIN18021_RS03830 PF01842 ACT domain CPIN18021_RS03830 PF00551 Formyl transferase CPIN18021_RS03835 PF00004 ATPase family associated with various cellular activities (AAA) CPIN18021_RS03835 PF02190 ATP-dependent protease La (LON) substrate-binding domain CPIN18021_RS03835 PF05362 Lon protease (S16) C-terminal proteolytic domain CPIN18021_RS03840 PF13525 Outer membrane lipoprotein CPIN18021_RS03845 PF02623 FliW protein CPIN18021_RS03870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPIN18021_RS03875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPIN18021_RS03875 PF01872 RibD C-terminal domain CPIN18021_RS03880 PF00474 Sodium:solute symporter family CPIN18021_RS03885 PF00528 Binding-protein-dependent transport system inner membrane component CPIN18021_RS03890 PF00005 ABC transporter CPIN18021_RS03895 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPIN18021_RS03900 PF08543 Phosphomethylpyrimidine kinase CPIN18021_RS03905 PF02581 Thiamine monophosphate synthase CPIN18021_RS03915 PF01230 HIT domain CPIN18021_RS03920 PF01409 tRNA synthetases class II core domain (F) CPIN18021_RS03920 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CPIN18021_RS03925 PF03483 B3/4 domain CPIN18021_RS03925 PF03484 tRNA synthetase B5 domain CPIN18021_RS03925 PF03147 Ferredoxin-fold anticodon binding domain CPIN18021_RS03925 PF01588 Putative tRNA binding domain CPIN18021_RS03925 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CPIN18021_RS03930 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPIN18021_RS03935 PF02401 LytB protein CPIN18021_RS03940 PF00575 S1 RNA binding domain CPIN18021_RS03950 PF01842 ACT domain CPIN18021_RS03950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPIN18021_RS03950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPIN18021_RS03960 PF04551 GcpE protein CPIN18021_RS03965 PF03796 DnaB-like helicase C terminal domain CPIN18021_RS03965 PF00772 DnaB-like helicase N terminal domain CPIN18021_RS03975 PF03631 Virulence factor BrkB CPIN18021_RS03980 PF00589 Phage integrase family CPIN18021_RS03980 PF18644 Phage integrase SAM-like domain CPIN18021_RS03985 PF01177 Asp/Glu/Hydantoin racemase CPIN18021_RS03995 PF00672 HAMP domain CPIN18021_RS03995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN18021_RS03995 PF17200 Single Cache domain 2 CPIN18021_RS04005 PF00512 His Kinase A (phospho-acceptor) domain CPIN18021_RS04005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN18021_RS04010 PF14698 Argininosuccinate lyase C-terminal CPIN18021_RS04010 PF00206 Lyase CPIN18021_RS04020 PF02618 YceG-like family CPIN18021_RS04025 PF03971 Monomeric isocitrate dehydrogenase CPIN18021_RS04030 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPIN18021_RS04030 PF00056 lactate/malate dehydrogenase, NAD binding domain CPIN18021_RS04035 PF08442 ATP-grasp domain CPIN18021_RS04035 PF00549 CoA-ligase CPIN18021_RS04040 PF02629 CoA binding domain CPIN18021_RS04040 PF00549 CoA-ligase CPIN18021_RS04045 PF08264 Anticodon-binding domain of tRNA CPIN18021_RS04045 PF00133 tRNA synthetases class I (I, L, M and V) CPIN18021_RS04045 PF10458 Valyl tRNA synthetase tRNA binding arm CPIN18021_RS04050 PF00005 ABC transporter CPIN18021_RS04050 PF09383 NIL domain CPIN18021_RS04055 PF00528 Binding-protein-dependent transport system inner membrane component CPIN18021_RS04060 PF03180 NLPA lipoprotein CPIN18021_RS04065 PF01810 LysE type translocator CPIN18021_RS04075 PF01008 Initiation factor 2 subunit family CPIN18021_RS04075 PF03061 Thioesterase superfamily CPIN18021_RS04080 PF08003 Protein of unknown function (DUF1698) CPIN18021_RS04085 PF01841 Transglutaminase-like superfamily CPIN18021_RS04095 PF07687 Peptidase dimerisation domain CPIN18021_RS04095 PF01546 Peptidase family M20/M25/M40 CPIN18021_RS04100 PF02861 Clp amino terminal domain, pathogenicity island component CPIN18021_RS04100 PF00004 ATPase family associated with various cellular activities (AAA) CPIN18021_RS04100 PF07724 AAA domain (Cdc48 subfamily) CPIN18021_RS04100 PF10431 C-terminal, D2-small domain, of ClpB protein CPIN18021_RS04100 PF17871 AAA lid domain CPIN18021_RS04105 PF03572 Peptidase family S41 CPIN18021_RS04105 PF13180 PDZ domain CPIN18021_RS04110 PF01259 SAICAR synthetase CPIN18021_RS04115 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CPIN18021_RS04130 PF01553 Acyltransferase CPIN18021_RS04135 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPIN18021_RS04145 PF00403 Heavy-metal-associated domain CPIN18021_RS04160 PF00669 Bacterial flagellin N-terminal helical region CPIN18021_RS04165 PF03883 Peroxide stress protein YaaA CPIN18021_RS04170 PF00216 Bacterial DNA-binding protein CPIN18021_RS04185 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPIN18021_RS04185 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPIN18021_RS04190 PF00158 Sigma-54 interaction domain CPIN18021_RS04190 PF00072 Response regulator receiver domain CPIN18021_RS04205 PF00521 DNA gyrase/topoisomerase IV, subunit A CPIN18021_RS04205 PF03989 DNA gyrase C-terminal domain, beta-propeller CPIN18021_RS04215 PF00871 Acetokinase family CPIN18021_RS04220 PF01515 Phosphate acetyl/butaryl transferase CPIN18021_RS04225 PF02107 Flagellar L-ring protein CPIN18021_RS04230 PF00226 DnaJ domain CPIN18021_RS04230 PF01556 DnaJ C terminal domain CPIN18021_RS04235 PF13411 MerR HTH family regulatory protein CPIN18021_RS04240 PF02254 TrkA-N domain CPIN18021_RS04240 PF00999 Sodium/hydrogen exchanger family CPIN18021_RS04245 PF14579 Helix-hairpin-helix motif CPIN18021_RS04245 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPIN18021_RS04245 PF02811 PHP domain CPIN18021_RS04245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPIN18021_RS04250 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CPIN18021_RS04255 PF01965 DJ-1/PfpI family CPIN18021_RS04265 PF17763 Glutaminase/Asparaginase C-terminal domain CPIN18021_RS04265 PF00710 Asparaginase, N-terminal CPIN18021_RS04270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CPIN18021_RS04270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CPIN18021_RS04270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPIN18021_RS04275 PF03974 Ecotin CPIN18021_RS04280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CPIN18021_RS04280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPIN18021_RS04280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CPIN18021_RS04285 PF01943 Polysaccharide biosynthesis protein CPIN18021_RS04285 PF14667 Polysaccharide biosynthesis C-terminal domain CPIN18021_RS04295 PF13439 Glycosyltransferase Family 4 CPIN18021_RS04295 PF00534 Glycosyl transferases group 1 CPIN18021_RS04300 PF00535 Glycosyl transferase family 2 CPIN18021_RS04305 PF00534 Glycosyl transferases group 1 CPIN18021_RS04305 PF13439 Glycosyltransferase Family 4 CPIN18021_RS04310 PF18527 STT3/PglB C-terminal beta-barrel domain CPIN18021_RS04310 PF02516 Oligosaccharyl transferase STT3 subunit CPIN18021_RS04315 PF13477 Glycosyl transferase 4-like CPIN18021_RS04315 PF00534 Glycosyl transferases group 1 CPIN18021_RS04320 PF02397 Bacterial sugar transferase CPIN18021_RS04335 PF17827 PrmC N-terminal domain CPIN18021_RS04335 PF05175 Methyltransferase small domain CPIN18021_RS04340 PF01435 Peptidase family M48 CPIN18021_RS04345 PF00209 Sodium:neurotransmitter symporter family CPIN18021_RS04350 PF01966 HD domain CPIN18021_RS04350 PF01743 Poly A polymerase head domain CPIN18021_RS04350 PF12627 Probable RNA and SrmB- binding site of polymerase A CPIN18021_RS04365 PF00180 Isocitrate/isopropylmalate dehydrogenase CPIN18021_RS04370 PF13580 SIS domain CPIN18021_RS04375 PF00294 pfkB family carbohydrate kinase CPIN18021_RS04375 PF01467 Cytidylyltransferase-like CPIN18021_RS04380 PF01370 NAD dependent epimerase/dehydratase family CPIN18021_RS04400 PF01709 Transcriptional regulator CPIN18021_RS04405 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPIN18021_RS04410 PF00375 Sodium:dicarboxylate symporter family CPIN18021_RS04415 PF00881 Nitroreductase family CPIN18021_RS04420 PF07687 Peptidase dimerisation domain CPIN18021_RS04420 PF01546 Peptidase family M20/M25/M40 CPIN18021_RS04425 PF07687 Peptidase dimerisation domain CPIN18021_RS04425 PF01546 Peptidase family M20/M25/M40 CPIN18021_RS04430 PF03575 Peptidase family S51 CPIN18021_RS04435 PF03606 C4-dicarboxylate anaerobic carrier CPIN18021_RS04440 PF07687 Peptidase dimerisation domain CPIN18021_RS04440 PF01546 Peptidase family M20/M25/M40 CPIN18021_RS04445 PF07690 Major Facilitator Superfamily CPIN18021_RS04450 PF00209 Sodium:neurotransmitter symporter family CPIN18021_RS04460 PF13180 PDZ domain CPIN18021_RS04460 PF17820 PDZ domain CPIN18021_RS04465 PF02637 GatB domain CPIN18021_RS04465 PF02934 GatB/GatE catalytic domain CPIN18021_RS04470 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CPIN18021_RS04470 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CPIN18021_RS04475 PF00933 Glycosyl hydrolase family 3 N terminal domain CPIN18021_RS04480 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPIN18021_RS04485 PF00672 HAMP domain CPIN18021_RS04485 PF16591 Helical bimodular sensor domain CPIN18021_RS04485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN18021_RS04495 PF00482 Type II secretion system (T2SS), protein F CPIN18021_RS04500 PF00437 Type II/IV secretion system protein CPIN18021_RS04520 PF03958 Bacterial type II/III secretion system short domain CPIN18021_RS04520 PF00263 Bacterial type II and III secretion system protein CPIN18021_RS04545 PF01926 50S ribosome-binding GTPase CPIN18021_RS04545 PF07650 KH domain CPIN18021_RS04550 PF10431 C-terminal, D2-small domain, of ClpB protein CPIN18021_RS04550 PF07724 AAA domain (Cdc48 subfamily) CPIN18021_RS04555 PF00227 Proteasome subunit CPIN18021_RS04560 PF01281 Ribosomal protein L9, N-terminal domain CPIN18021_RS04560 PF03948 Ribosomal protein L9, C-terminal domain CPIN18021_RS04565 PF00764 Arginosuccinate synthase CPIN18021_RS04575 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPIN18021_RS04575 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CPIN18021_RS04580 PF01479 S4 domain CPIN18021_RS04585 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CPIN18021_RS04590 PF00005 ABC transporter CPIN18021_RS04590 PF12399 Branched-chain amino acid ATP-binding cassette transporter CPIN18021_RS04595 PF04963 Sigma-54 factor, core binding domain CPIN18021_RS04595 PF00309 Sigma-54 factor, Activator interacting domain (AID) CPIN18021_RS04595 PF04552 Sigma-54, DNA binding domain CPIN18021_RS04605 PF00183 Hsp90 protein CPIN18021_RS04610 PF00082 Subtilase family CPIN18021_RS04610 PF03797 Autotransporter beta-domain CPIN18021_RS04610 PF12951 Passenger-associated-transport-repeat CPIN18021_RS04625 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPIN18021_RS04630 PF01455 HupF/HypC family CPIN18021_RS04635 PF01924 Hydrogenase formation hypA family CPIN18021_RS04640 PF02769 AIR synthase related protein, C-terminal domain CPIN18021_RS04640 PF00586 AIR synthase related protein, N-terminal domain CPIN18021_RS04645 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CPIN18021_RS04655 PF03441 FAD binding domain of DNA photolyase CPIN18021_RS04655 PF00875 DNA photolyase CPIN18021_RS04660 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CPIN18021_RS04660 PF00132 Bacterial transferase hexapeptide (six repeats) CPIN18021_RS04665 PF10369 Small subunit of acetolactate synthase CPIN18021_RS04670 PF00205 Thiamine pyrophosphate enzyme, central domain CPIN18021_RS04670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPIN18021_RS04670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPIN18021_RS04680 PF17854 FtsK alpha domain CPIN18021_RS04680 PF09397 Ftsk gamma domain CPIN18021_RS04680 PF01580 FtsK/SpoIIIE family CPIN18021_RS04690 PF01063 Amino-transferase class IV CPIN18021_RS04700 PF00166 Chaperonin 10 Kd subunit CPIN18021_RS04705 PF00118 TCP-1/cpn60 chaperonin family CPIN18021_RS04710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPIN18021_RS04710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPIN18021_RS04710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPIN18021_RS04710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPIN18021_RS04735 PF01594 AI-2E family transporter CPIN18021_RS04755 PF02875 Mur ligase family, glutamate ligase domain CPIN18021_RS04755 PF08245 Mur ligase middle domain CPIN18021_RS04760 PF02261 Aspartate decarboxylase CPIN18021_RS04765 PF00677 Lumazine binding domain CPIN18021_RS04770 PF02578 Multi-copper polyphenol oxidoreductase laccase CPIN18021_RS04780 PF03462 PCRF domain CPIN18021_RS04780 PF00472 RF-1 domain CPIN18021_RS04785 PF01649 Ribosomal protein S20 CPIN18021_RS04795 PF02652 L-lactate permease CPIN18021_RS04805 PF00795 Carbon-nitrogen hydrolase CPIN18021_RS04815 PF04371 Porphyromonas-type peptidyl-arginine deiminase CPIN18021_RS04825 PF00528 Binding-protein-dependent transport system inner membrane component CPIN18021_RS04830 PF00528 Binding-protein-dependent transport system inner membrane component CPIN18021_RS04835 PF00005 ABC transporter CPIN18021_RS04840 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPIN18021_RS04845 PF12327 FtsZ family, C-terminal domain CPIN18021_RS04845 PF00091 Tubulin/FtsZ family, GTPase domain CPIN18021_RS04850 PF02491 SHS2 domain inserted in FTSA CPIN18021_RS04865 PF01795 MraW methylase family CPIN18021_RS04875 PF14306 PUA-like domain CPIN18021_RS04875 PF01747 ATP-sulfurylase CPIN18021_RS04880 PF00486 Transcriptional regulatory protein, C terminal CPIN18021_RS04880 PF00072 Response regulator receiver domain CPIN18021_RS04885 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPIN18021_RS04885 PF02542 YgbB family CPIN18021_RS04890 PF01964 Radical SAM ThiC family CPIN18021_RS04895 PF10609 NUBPL iron-transfer P-loop NTPase CPIN18021_RS04895 PF01883 Iron-sulfur cluster assembly protein CPIN18021_RS04945 PF00975 Thioesterase domain CPIN18021_RS04945 PF00668 Condensation domain CPIN18021_RS04945 PF13193 AMP-binding enzyme C-terminal domain CPIN18021_RS04945 PF00501 AMP-binding enzyme CPIN18021_RS04945 PF00550 Phosphopantetheine attachment site CPIN18021_RS04950 PF16221 winged helix-turn-helix CPIN18021_RS04950 PF09940 Domain of unknown function (DUF2172) CPIN18021_RS04950 PF16254 Domain of unknown function (DUF4910) CPIN18021_RS04965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPIN18021_RS04975 PF02391 MoaE protein CPIN18021_RS04980 PF03453 MoeA N-terminal region (domain I and II) CPIN18021_RS04980 PF03454 MoeA C-terminal region (domain IV) CPIN18021_RS04980 PF00994 Probable molybdopterin binding domain CPIN18021_RS04985 PF02661 Fic/DOC family CPIN18021_RS04985 PF13784 Fic/DOC family N-terminal CPIN18021_RS04990 PF12169 DNA polymerase III subunits gamma and tau domain III CPIN18021_RS04990 PF12170 DNA polymerase III tau subunit V interacting with alpha CPIN18021_RS05000 PF02666 Phosphatidylserine decarboxylase CPIN18021_RS05005 PF00149 Calcineurin-like phosphoesterase CPIN18021_RS05015 PF09084 NMT1/THI5 like CPIN18021_RS05020 PF00005 ABC transporter CPIN18021_RS05025 PF00593 TonB dependent receptor CPIN18021_RS05025 PF04886 PT repeat CPIN18021_RS05025 PF07715 TonB-dependent Receptor Plug Domain CPIN18021_RS05040 PF01293 Phosphoenolpyruvate carboxykinase CPIN18021_RS05045 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CPIN18021_RS05050 PF00682 HMGL-like CPIN18021_RS05050 PF02436 Conserved carboxylase domain CPIN18021_RS05050 PF00364 Biotin-requiring enzyme CPIN18021_RS05060 PF00209 Sodium:neurotransmitter symporter family CPIN18021_RS05065 PF00209 Sodium:neurotransmitter symporter family CPIN18021_RS05070 PF00209 Sodium:neurotransmitter symporter family CPIN18021_RS05075 PF01070 FMN-dependent dehydrogenase CPIN18021_RS05100 PF02589 LUD domain CPIN18021_RS05105 PF13183 4Fe-4S dicluster domain CPIN18021_RS05105 PF02589 LUD domain CPIN18021_RS05105 PF11870 Domain of unknown function (DUF3390) CPIN18021_RS05110 PF02754 Cysteine-rich domain CPIN18021_RS05115 PF02652 L-lactate permease CPIN18021_RS05120 PF00892 EamA-like transporter family CPIN18021_RS05125 PF00873 AcrB/AcrD/AcrF family CPIN18021_RS05140 PF00813 FliP family CPIN18021_RS05145 PF13677 Membrane MotB of proton-channel complex MotA/MotB CPIN18021_RS05145 PF00691 OmpA family CPIN18021_RS05155 PF12804 MobA-like NTP transferase domain CPIN18021_RS05155 PF00132 Bacterial transferase hexapeptide (six repeats) CPIN18021_RS05160 PF02441 Flavoprotein CPIN18021_RS05160 PF04127 DNA / pantothenate metabolism flavoprotein CPIN18021_RS05170 PF01255 Putative undecaprenyl diphosphate synthase CPIN18021_RS05175 PF01478 Type IV leader peptidase family CPIN18021_RS05175 PF06750 Bacterial Peptidase A24 N-terminal domain CPIN18021_RS05185 PF01416 tRNA pseudouridine synthase CPIN18021_RS05190 PF00375 Sodium:dicarboxylate symporter family CPIN18021_RS05195 PF08439 Oligopeptidase F CPIN18021_RS05195 PF01432 Peptidase family M3 CPIN18021_RS05205 PF07715 TonB-dependent Receptor Plug Domain CPIN18021_RS05205 PF00593 TonB dependent receptor CPIN18021_RS05205 PF04886 PT repeat CPIN18021_RS05210 PF00072 Response regulator receiver domain CPIN18021_RS05210 PF00486 Transcriptional regulatory protein, C terminal CPIN18021_RS05230 PF04205 FMN-binding domain CPIN18021_RS05230 PF00890 FAD binding domain CPIN18021_RS05235 PF00221 Aromatic amino acid lyase CPIN18021_RS05240 PF00438 S-adenosylmethionine synthetase, N-terminal domain CPIN18021_RS05240 PF02773 S-adenosylmethionine synthetase, C-terminal domain CPIN18021_RS05240 PF02772 S-adenosylmethionine synthetase, central domain CPIN18021_RS05250 PF00771 FHIPEP family CPIN18021_RS05270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPIN18021_RS05270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPIN18021_RS05275 PF01979 Amidohydrolase family CPIN18021_RS05280 PF01370 NAD dependent epimerase/dehydratase family CPIN18021_RS05285 PF02581 Thiamine monophosphate synthase CPIN18021_RS05290 PF05690 Thiazole biosynthesis protein ThiG CPIN18021_RS05300 PF14602 Hexapeptide repeat of succinyl-transferase CPIN18021_RS05300 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CPIN18021_RS05315 PF02561 Flagellar protein FliS CPIN18021_RS05320 PF07195 Flagellar hook-associated protein 2 C-terminus CPIN18021_RS05320 PF07196 Flagellin hook IN motif CPIN18021_RS05320 PF02465 Flagellar hook-associated protein 2 N-terminus CPIN18021_RS05350 PF01381 Helix-turn-helix CPIN18021_RS05365 PF13401 AAA domain CPIN18021_RS05365 PF09077 Mu B transposition protein, C terminal CPIN18021_RS05590 PF02119 Flagellar P-ring protein CPIN18021_RS05610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN18021_RS05610 PF07196 Flagellin hook IN motif CPIN18021_RS05620 PF05726 Pirin C-terminal cupin domain CPIN18021_RS05620 PF02678 Pirin CPIN18021_RS05625 PF00224 Pyruvate kinase, barrel domain CPIN18021_RS05625 PF00391 PEP-utilising enzyme, mobile domain CPIN18021_RS05625 PF02887 Pyruvate kinase, alpha/beta domain CPIN18021_RS05635 PF12838 4Fe-4S dicluster domain CPIN18021_RS05635 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPIN18021_RS05635 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS05635 PF00384 Molybdopterin oxidoreductase CPIN18021_RS05635 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN18021_RS05640 PF00384 Molybdopterin oxidoreductase CPIN18021_RS05640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN18021_RS05640 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS05645 PF13247 4Fe-4S dicluster domain CPIN18021_RS05655 PF02634 FdhD/NarQ family CPIN18021_RS05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPIN18021_RS05660 PF03459 TOBE domain CPIN18021_RS05670 PF01702 Queuine tRNA-ribosyltransferase CPIN18021_RS05675 PF00472 RF-1 domain CPIN18021_RS05675 PF03462 PCRF domain CPIN18021_RS05680 PF02569 Pantoate-beta-alanine ligase CPIN18021_RS05685 PF04055 Radical SAM superfamily CPIN18021_RS05685 PF00919 Uncharacterized protein family UPF0004 CPIN18021_RS05690 PF01171 PP-loop family CPIN18021_RS05695 PF04452 RNA methyltransferase CPIN18021_RS05720 PF04055 Radical SAM superfamily CPIN18021_RS05720 PF06463 Molybdenum Cofactor Synthesis C CPIN18021_RS05725 PF00669 Bacterial flagellin N-terminal helical region CPIN18021_RS05745 PF01116 Fructose-bisphosphate aldolase class-II CPIN18021_RS05755 PF10576 Iron-sulfur binding domain of endonuclease III CPIN18021_RS05755 PF00633 Helix-hairpin-helix motif CPIN18021_RS05755 PF00730 HhH-GPD superfamily base excision DNA repair protein CPIN18021_RS05770 PF02028 BCCT, betaine/carnitine/choline family transporter CPIN18021_RS05775 PF00486 Transcriptional regulatory protein, C terminal CPIN18021_RS05775 PF00072 Response regulator receiver domain CPIN18021_RS05790 PF17757 UvrB interaction domain CPIN18021_RS05790 PF04851 Type III restriction enzyme, res subunit CPIN18021_RS05790 PF00271 Helicase conserved C-terminal domain CPIN18021_RS05790 PF02151 UvrB/uvrC motif CPIN18021_RS05790 PF12344 Ultra-violet resistance protein B CPIN18021_RS05805 PF07963 Prokaryotic N-terminal methylation motif CPIN18021_RS05805 PF00114 Pilin (bacterial filament) CPIN18021_RS05810 PF00271 Helicase conserved C-terminal domain CPIN18021_RS05810 PF17764 3′ DNA-binding domain (3′BD) CPIN18021_RS05810 PF18074 Primosomal protein N C-terminal domain CPIN18021_RS05810 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CPIN18021_RS05810 PF00270 DEAD/DEAH box helicase CPIN18021_RS05815 PF00072 Response regulator receiver domain CPIN18021_RS05815 PF01339 CheB methylesterase CPIN18021_RS05820 PF01739 CheR methyltransferase, SAM binding domain CPIN18021_RS05830 PF01578 Cytochrome C assembly protein CPIN18021_RS05830 PF05140 ResB-like family CPIN18021_RS05835 PF13649 Methyltransferase domain CPIN18021_RS05840 PF01687 Riboflavin kinase CPIN18021_RS05840 PF06574 FAD synthetase CPIN18021_RS05850 PF01653 NAD-dependent DNA ligase adenylation domain CPIN18021_RS05850 PF03120 NAD-dependent DNA ligase OB-fold domain CPIN18021_RS05850 PF00533 BRCA1 C Terminus (BRCT) domain CPIN18021_RS05850 PF12826 Helix-hairpin-helix motif CPIN18021_RS05855 PF00809 Pterin binding enzyme CPIN18021_RS05870 PF01842 ACT domain CPIN18021_RS05870 PF00696 Amino acid kinase family CPIN18021_RS05870 PF13840 ACT domain CPIN18021_RS05875 PF00293 NUDIX domain CPIN18021_RS05880 PF04055 Radical SAM superfamily CPIN18021_RS05880 PF06969 HemN C-terminal domain CPIN18021_RS05885 PF02416 mttA/Hcf106 family CPIN18021_RS05890 PF00902 Sec-independent protein translocase protein (TatC) CPIN18021_RS05895 PF02547 Queuosine biosynthesis protein CPIN18021_RS05905 PF00206 Lyase CPIN18021_RS05905 PF10415 Fumarase C C-terminus CPIN18021_RS05910 PF03605 Anaerobic c4-dicarboxylate membrane transporter CPIN18021_RS05920 PF01343 Peptidase family S49 CPIN18021_RS05925 PF01979 Amidohydrolase family CPIN18021_RS05930 PF01220 Dehydroquinase class II CPIN18021_RS05935 PF01321 Creatinase/Prolidase N-terminal domain CPIN18021_RS05935 PF00557 Metallopeptidase family M24 CPIN18021_RS05940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CPIN18021_RS05945 PF00448 SRP54-type protein, GTPase domain CPIN18021_RS05950 PF10609 NUBPL iron-transfer P-loop NTPase CPIN18021_RS05960 PF04545 Sigma-70, region 4 CPIN18021_RS05960 PF04539 Sigma-70 region 3 CPIN18021_RS05960 PF04542 Sigma-70 region 2 CPIN18021_RS05965 PF02154 Flagellar motor switch protein FliM CPIN18021_RS05965 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPIN18021_RS05970 PF04509 CheC-like family CPIN18021_RS05970 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPIN18021_RS05975 PF03641 Possible lysine decarboxylase CPIN18021_RS05985 PF00474 Sodium:solute symporter family CPIN18021_RS05990 PF05992 SbmA/BacA-like family CPIN18021_RS05995 PF07715 TonB-dependent Receptor Plug Domain CPIN18021_RS05995 PF00593 TonB dependent receptor CPIN18021_RS06000 PF00593 TonB dependent receptor CPIN18021_RS06000 PF07715 TonB-dependent Receptor Plug Domain CPIN18021_RS06005 PF07715 TonB-dependent Receptor Plug Domain CPIN18021_RS06005 PF00593 TonB dependent receptor CPIN18021_RS06010 PF01618 MotA/TolQ/ExbB proton channel family CPIN18021_RS06015 PF02472 Biopolymer transport protein ExbD/TolR CPIN18021_RS06025 PF01883 Iron-sulfur cluster assembly protein CPIN18021_RS06040 PF09424 Yqey-like protein CPIN18021_RS06050 PF01384 Phosphate transporter family CPIN18021_RS06055 PF00581 Rhodanese-like domain CPIN18021_RS06065 PF00218 Indole-3-glycerol phosphate synthase CPIN18021_RS06075 PF03692 Putative zinc- or iron-chelating domain CPIN18021_RS06080 PF08468 Methyltransferase small domain N-terminal CPIN18021_RS06080 PF05175 Methyltransferase small domain CPIN18021_RS06090 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPIN18021_RS06095 PF01474 Class-II DAHP synthetase family CPIN18021_RS06100 PF00892 EamA-like transporter family CPIN18021_RS06110 PF02163 Peptidase family M50 CPIN18021_RS06110 PF17820 PDZ domain CPIN18021_RS06115 PF01168 Alanine racemase, N-terminal domain CPIN18021_RS06120 PF01323 DSBA-like thioredoxin domain CPIN18021_RS06130 PF00005 ABC transporter CPIN18021_RS06130 PF12857 TOBE-like domain CPIN18021_RS06145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPIN18021_RS06145 PF03459 TOBE domain CPIN18021_RS06155 PF04028 Domain of unknown function (DUF374) CPIN18021_RS06160 PF04055 Radical SAM superfamily CPIN18021_RS06160 PF01938 TRAM domain CPIN18021_RS06160 PF00919 Uncharacterized protein family UPF0004 CPIN18021_RS06170 PF13184 NusA-like KH domain CPIN18021_RS06170 PF08529 NusA N-terminal domain CPIN18021_RS06180 PF03807 NADP oxidoreductase coenzyme F420-dependent CPIN18021_RS06180 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPIN18021_RS06185 PF00171 Aldehyde dehydrogenase family CPIN18021_RS06195 PF03372 Endonuclease/Exonuclease/phosphatase family CPIN18021_RS06210 PF01207 Dihydrouridine synthase (Dus) CPIN18021_RS06225 PF02590 Predicted SPOUT methyltransferase CPIN18021_RS06230 PF01039 Carboxyl transferase domain CPIN18021_RS06230 PF17848 Acetyl-coA carboxylase zinc finger domain CPIN18021_RS06235 PF00459 Inositol monophosphatase family CPIN18021_RS06240 PF00285 Citrate synthase, C-terminal domain CPIN18021_RS06245 PF02080 TrkA-C domain CPIN18021_RS06245 PF00999 Sodium/hydrogen exchanger family CPIN18021_RS06245 PF02254 TrkA-N domain CPIN18021_RS06250 PF01171 PP-loop family CPIN18021_RS06255 PF01048 Phosphorylase superfamily CPIN18021_RS06260 PF00698 Acyl transferase domain CPIN18021_RS06265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPIN18021_RS06275 PF00691 OmpA family CPIN18021_RS06290 PF02472 Biopolymer transport protein ExbD/TolR CPIN18021_RS06295 PF01618 MotA/TolQ/ExbB proton channel family CPIN18021_RS06300 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CPIN18021_RS06305 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPIN18021_RS06305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPIN18021_RS06310 PF00231 ATP synthase CPIN18021_RS06315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPIN18021_RS06315 PF00306 ATP synthase alpha/beta chain, C terminal domain CPIN18021_RS06315 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPIN18021_RS06320 PF00213 ATP synthase delta (OSCP) subunit CPIN18021_RS06325 PF00430 ATP synthase B/B' CF(0) CPIN18021_RS06335 PF17762 HTH domain found in ParB protein CPIN18021_RS06335 PF02195 ParB-like nuclease domain CPIN18021_RS06340 PF13614 AAA domain CPIN18021_RS06345 PF02237 Biotin protein ligase C terminal domain CPIN18021_RS06345 PF03099 Biotin/lipoate A/B protein ligase family CPIN18021_RS06345 PF08279 HTH domain CPIN18021_RS06350 PF02911 Formyl transferase, C-terminal domain CPIN18021_RS06350 PF00551 Formyl transferase CPIN18021_RS06360 PF00137 ATP synthase subunit C CPIN18021_RS06370 PF01066 CDP-alcohol phosphatidyltransferase CPIN18021_RS06375 PF01434 Peptidase family M41 CPIN18021_RS06375 PF00004 ATPase family associated with various cellular activities (AAA) CPIN18021_RS06375 PF17862 AAA+ lid domain CPIN18021_RS06385 PF00072 Response regulator receiver domain CPIN18021_RS06395 PF02719 Polysaccharide biosynthesis protein CPIN18021_RS06400 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPIN18021_RS06410 PF03725 3' exoribonuclease family, domain 2 CPIN18021_RS06410 PF00575 S1 RNA binding domain CPIN18021_RS06410 PF00013 KH domain CPIN18021_RS06410 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CPIN18021_RS06410 PF01138 3' exoribonuclease family, domain 1 CPIN18021_RS06430 PF02844 Phosphoribosylglycinamide synthetase, N domain CPIN18021_RS06430 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPIN18021_RS06430 PF02843 Phosphoribosylglycinamide synthetase, C domain CPIN18021_RS06445 PF01145 SPFH domain / Band 7 family CPIN18021_RS06445 PF16200 C-terminal region of band_7 CPIN18021_RS06465 PF01741 Large-conductance mechanosensitive channel, MscL CPIN18021_RS06470 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPIN18021_RS06475 PF02325 YGGT family CPIN18021_RS06495 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CPIN18021_RS06505 PF00133 tRNA synthetases class I (I, L, M and V) CPIN18021_RS06505 PF09334 tRNA synthetases class I (M) CPIN18021_RS06505 PF01588 Putative tRNA binding domain CPIN18021_RS06535 PF00563 EAL domain CPIN18021_RS06535 PF00990 Diguanylate cyclase, GGDEF domain CPIN18021_RS06535 PF03707 Bacterial signalling protein N terminal repeat CPIN18021_RS06545 PF00990 Diguanylate cyclase, GGDEF domain CPIN18021_RS06545 PF00360 Phytochrome region CPIN18021_RS06545 PF00563 EAL domain CPIN18021_RS06545 PF01590 GAF domain CPIN18021_RS06550 PF01513 ATP-NAD kinase CPIN18021_RS06555 PF13476 AAA domain CPIN18021_RS06560 PF00072 Response regulator receiver domain CPIN18021_RS06560 PF00990 Diguanylate cyclase, GGDEF domain CPIN18021_RS06565 PF01026 TatD related DNase CPIN18021_RS06575 PF05036 Sporulation related domain CPIN18021_RS06575 PF03330 Lytic transglycolase CPIN18021_RS06595 PF01926 50S ribosome-binding GTPase CPIN18021_RS06605 PF03717 Penicillin-binding Protein dimerisation domain CPIN18021_RS06605 PF00905 Penicillin binding protein transpeptidase domain CPIN18021_RS06610 PF01208 Uroporphyrinogen decarboxylase (URO-D) CPIN18021_RS06615 PF00342 Phosphoglucose isomerase CPIN18021_RS06620 PF00483 Nucleotidyl transferase CPIN18021_RS06625 PF00005 ABC transporter CPIN18021_RS06625 PF09383 NIL domain CPIN18021_RS06630 PF00528 Binding-protein-dependent transport system inner membrane component CPIN18021_RS06635 PF12849 PBP superfamily domain CPIN18021_RS06640 PF01205 Uncharacterized protein family UPF0029 CPIN18021_RS06640 PF09186 Domain of unknown function (DUF1949) CPIN18021_RS06645 PF01790 Prolipoprotein diacylglyceryl transferase CPIN18021_RS06650 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CPIN18021_RS06655 PF00890 FAD binding domain CPIN18021_RS06655 PF02910 Fumarate reductase flavoprotein C-term CPIN18021_RS06660 PF13085 2Fe-2S iron-sulfur cluster binding domain CPIN18021_RS06660 PF13183 4Fe-4S dicluster domain CPIN18021_RS06670 PF01312 FlhB HrpN YscU SpaS Family CPIN18021_RS06695 PF00202 Aminotransferase class-III CPIN18021_RS06705 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CPIN18021_RS06705 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CPIN18021_RS06710 PF10502 Signal peptidase, peptidase S26 CPIN18021_RS06715 PF02163 Peptidase family M50 CPIN18021_RS06720 PF02502 Ribose/Galactose Isomerase CPIN18021_RS06730 PF00156 Phosphoribosyl transferase domain CPIN18021_RS06735 PF09335 SNARE associated Golgi protein CPIN18021_RS06740 PF00883 Cytosol aminopeptidase family, catalytic domain CPIN18021_RS06745 PF01926 50S ribosome-binding GTPase CPIN18021_RS06745 PF06071 Protein of unknown function (DUF933) CPIN18021_RS06760 PF00005 ABC transporter CPIN18021_RS06765 PF02405 Permease MlaE CPIN18021_RS06770 PF00289 Biotin carboxylase, N-terminal domain CPIN18021_RS06770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPIN18021_RS06770 PF02785 Biotin carboxylase C-terminal domain CPIN18021_RS06775 PF09107 Elongation factor SelB, winged helix CPIN18021_RS06775 PF09106 Elongation factor SelB, winged helix CPIN18021_RS06775 PF09105 Elongation factor SelB, winged helix CPIN18021_RS06775 PF03144 Elongation factor Tu domain 2 CPIN18021_RS06775 PF00009 Elongation factor Tu GTP binding domain CPIN18021_RS06780 PF03841 L-seryl-tRNA selenium transferase CPIN18021_RS06785 PF01268 Formate--tetrahydrofolate ligase CPIN18021_RS06790 PF17384 RimP C-terminal SH3 domain CPIN18021_RS06790 PF02576 RimP N-terminal domain CPIN18021_RS06795 PF02033 Ribosome-binding factor A CPIN18021_RS06800 PF04760 Translation initiation factor IF-2, N-terminal region CPIN18021_RS06800 PF11987 Translation-initiation factor 2 CPIN18021_RS06800 PF00009 Elongation factor Tu GTP binding domain CPIN18021_RS06810 PF00288 GHMP kinases N terminal domain CPIN18021_RS06810 PF08544 GHMP kinases C terminal CPIN18021_RS06820 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CPIN18021_RS06835 PF01103 Surface antigen CPIN18021_RS06835 PF07244 Surface antigen variable number repeat CPIN18021_RS06840 PF00403 Heavy-metal-associated domain CPIN18021_RS06855 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CPIN18021_RS06855 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CPIN18021_RS06910 PF03458 UPF0126 domain CPIN18021_RS06915 PF00578 AhpC/TSA family CPIN18021_RS06915 PF10417 C-terminal domain of 1-Cys peroxiredoxin CPIN18021_RS06935 PF04509 CheC-like family CPIN18021_RS06935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPIN18021_RS06945 PF01925 Sulfite exporter TauE/SafE CPIN18021_RS06960 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CPIN18021_RS06970 PF00535 Glycosyl transferase family 2 CPIN18021_RS06975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CPIN18021_RS06980 PF01522 Polysaccharide deacetylase CPIN18021_RS06985 PF00535 Glycosyl transferase family 2 CPIN18021_RS06985 PF01501 Glycosyl transferase family 8 CPIN18021_RS06995 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CPIN18021_RS07000 PF00534 Glycosyl transferases group 1 CPIN18021_RS07000 PF13439 Glycosyltransferase Family 4 CPIN18021_RS07005 PF00534 Glycosyl transferases group 1 CPIN18021_RS07005 PF13439 Glycosyltransferase Family 4 CPIN18021_RS07025 PF00528 Binding-protein-dependent transport system inner membrane component CPIN18021_RS07030 PF04998 RNA polymerase Rpb1, domain 5 CPIN18021_RS07030 PF04997 RNA polymerase Rpb1, domain 1 CPIN18021_RS07030 PF05000 RNA polymerase Rpb1, domain 4 CPIN18021_RS07030 PF04983 RNA polymerase Rpb1, domain 3 CPIN18021_RS07030 PF00623 RNA polymerase Rpb1, domain 2 CPIN18021_RS07035 PF04563 RNA polymerase beta subunit CPIN18021_RS07035 PF10385 RNA polymerase beta subunit external 1 domain CPIN18021_RS07035 PF04561 RNA polymerase Rpb2, domain 2 CPIN18021_RS07035 PF04565 RNA polymerase Rpb2, domain 3 CPIN18021_RS07035 PF00562 RNA polymerase Rpb2, domain 6 CPIN18021_RS07035 PF04560 RNA polymerase Rpb2, domain 7 CPIN18021_RS07040 PF16320 Ribosomal protein L7/L12 dimerisation domain CPIN18021_RS07040 PF00542 Ribosomal protein L7/L12 C-terminal domain CPIN18021_RS07045 PF00466 Ribosomal protein L10 CPIN18021_RS07050 PF00687 Ribosomal protein L1p/L10e family CPIN18021_RS07055 PF03946 Ribosomal protein L11, N-terminal domain CPIN18021_RS07055 PF00298 Ribosomal protein L11, RNA binding domain CPIN18021_RS07060 PF02357 Transcription termination factor nusG CPIN18021_RS07075 PF00471 Ribosomal protein L33 CPIN18021_RS07080 PF03143 Elongation factor Tu C-terminal domain CPIN18021_RS07080 PF00009 Elongation factor Tu GTP binding domain CPIN18021_RS07080 PF03144 Elongation factor Tu domain 2 CPIN18021_RS07115 PF00072 Response regulator receiver domain CPIN18021_RS07115 PF00196 Bacterial regulatory proteins, luxR family CPIN18021_RS07125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPIN18021_RS07125 PF00529 HlyD membrane-fusion protein of T1SS CPIN18021_RS07130 PF03412 Peptidase C39 family CPIN18021_RS07130 PF00005 ABC transporter CPIN18021_RS07130 PF00664 ABC transporter transmembrane region CPIN18021_RS07150 PF06969 HemN C-terminal domain CPIN18021_RS07150 PF04055 Radical SAM superfamily CPIN18021_RS07155 PF10788 Protein of unknown function (DUF2603) CPIN18021_RS07160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPIN18021_RS07160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPIN18021_RS07165 PF00490 Delta-aminolevulinic acid dehydratase CPIN18021_RS07170 PF00925 GTP cyclohydrolase II CPIN18021_RS07175 PF02527 rRNA small subunit methyltransferase G CPIN18021_RS07190 PF01435 Peptidase family M48 CPIN18021_RS07195 PF06039 Malate:quinone oxidoreductase (Mqo) CPIN18021_RS07200 PF00210 Ferritin-like domain CPIN18021_RS07205 PF02621 Menaquinone biosynthesis CPIN18021_RS07210 PF08274 PhnA Zinc-Ribbon CPIN18021_RS07210 PF03831 PhnA domain CPIN18021_RS07215 PF01098 Cell cycle protein CPIN18021_RS07220 PF01479 S4 domain CPIN18021_RS07220 PF00849 RNA pseudouridylate synthase CPIN18021_RS07230 PF02390 Putative methyltransferase CPIN18021_RS07235 PF00005 ABC transporter CPIN18021_RS07235 PF09383 NIL domain CPIN18021_RS07250 PF00202 Aminotransferase class-III CPIN18021_RS07260 PF00696 Amino acid kinase family CPIN18021_RS07265 PF01192 RNA polymerase Rpb6 CPIN18021_RS07270 PF02824 TGS domain CPIN18021_RS07270 PF13291 ACT domain CPIN18021_RS07270 PF04607 Region found in RelA / SpoT proteins CPIN18021_RS07275 PF00579 tRNA synthetases class I (W and Y) CPIN18021_RS07285 PF01520 N-acetylmuramoyl-L-alanine amidase CPIN18021_RS07290 PF01266 FAD dependent oxidoreductase CPIN18021_RS07290 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CPIN18021_RS07310 PF01134 Glucose inhibited division protein A CPIN18021_RS07310 PF13932 GidA associated domain CPIN18021_RS07330 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CPIN18021_RS07335 PF00920 Dehydratase family CPIN18021_RS07340 PF03553 Na+/H+ antiporter family CPIN18021_RS07340 PF13726 Na+-H+ antiporter family CPIN18021_RS07375 PF00375 Sodium:dicarboxylate symporter family CPIN18021_RS07380 PF01594 AI-2E family transporter CPIN18021_RS07385 PF17864 RuvB AAA lid domain CPIN18021_RS07385 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPIN18021_RS07385 PF05491 RuvB C-terminal winged helix domain CPIN18021_RS07390 PF03061 Thioesterase superfamily CPIN18021_RS07395 PF02811 PHP domain CPIN18021_RS07395 PF01336 OB-fold nucleic acid binding domain CPIN18021_RS07395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPIN18021_RS07395 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPIN18021_RS07395 PF11490 DNA polymerase III polC-type N-terminus II CPIN18021_RS07395 PF00929 Exonuclease CPIN18021_RS07395 PF14579 Helix-hairpin-helix motif CPIN18021_RS07400 PF00834 Ribulose-phosphate 3 epimerase family CPIN18021_RS07405 PF00830 Ribosomal L28 family CPIN18021_RS07415 PF06421 GTP-binding protein LepA C-terminus CPIN18021_RS07415 PF03144 Elongation factor Tu domain 2 CPIN18021_RS07415 PF00679 Elongation factor G C-terminus CPIN18021_RS07415 PF00009 Elongation factor Tu GTP binding domain CPIN18021_RS07425 PF00156 Phosphoribosyl transferase domain CPIN18021_RS07430 PF01632 Ribosomal protein L35 CPIN18021_RS07435 PF00453 Ribosomal protein L20 CPIN18021_RS07440 PF13018 Extended Signal Peptide of Type V secretion system CPIN18021_RS07440 PF02661 Fic/DOC family CPIN18021_RS07440 PF13332 Hemagglutinin repeat CPIN18021_RS07440 PF05860 haemagglutination activity domain CPIN18021_RS07440 PF03543 Yersinia/Haemophilus virulence surface antigen CPIN18021_RS07460 PF07516 SecA Wing and Scaffold domain CPIN18021_RS07460 PF07517 SecA DEAD-like domain CPIN18021_RS07460 PF02810 SEC-C motif CPIN18021_RS07460 PF01043 SecA preprotein cross-linking domain CPIN18021_RS07475 PF02689 Helicase CPIN18021_RS07475 PF05970 PIF1-like helicase CPIN18021_RS07490 PF04748 Divergent polysaccharide deacetylase CPIN18021_RS07495 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CPIN18021_RS07495 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CPIN18021_RS07505 PF00773 RNB domain CPIN18021_RS07515 PF01250 Ribosomal protein S6 CPIN18021_RS07520 PF00436 Single-strand binding protein family CPIN18021_RS07525 PF01084 Ribosomal protein S18 CPIN18021_RS07540 PF02673 Bacitracin resistance protein BacA CPIN18021_RS07545 PF00456 Transketolase, thiamine diphosphate binding domain CPIN18021_RS07545 PF02780 Transketolase, C-terminal domain CPIN18021_RS07545 PF02779 Transketolase, pyrimidine binding domain CPIN18021_RS07550 PF00348 Polyprenyl synthetase CPIN18021_RS07560 PF02575 YbaB/EbfC DNA-binding family CPIN18021_RS07565 PF13847 Methyltransferase domain CPIN18021_RS07575 PF00266 Aminotransferase class-V CPIN18021_RS07580 PF13742 OB-fold nucleic acid binding domain CPIN18021_RS07580 PF02601 Exonuclease VII, large subunit CPIN18021_RS07585 PF01209 ubiE/COQ5 methyltransferase family CPIN18021_RS07600 PF02780 Transketolase, C-terminal domain CPIN18021_RS07600 PF02779 Transketolase, pyrimidine binding domain CPIN18021_RS07600 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CPIN18021_RS07605 PF02108 Flagellar assembly protein FliH CPIN18021_RS07610 PF14841 FliG middle domain CPIN18021_RS07610 PF14842 FliG N-terminal domain CPIN18021_RS07610 PF01706 FliG C-terminal domain CPIN18021_RS07615 PF01514 Secretory protein of YscJ/FliF family CPIN18021_RS07615 PF08345 Flagellar M-ring protein C-terminal CPIN18021_RS07620 PF00155 Aminotransferase class I and II CPIN18021_RS07625 PF00800 Prephenate dehydratase CPIN18021_RS07625 PF01842 ACT domain CPIN18021_RS07625 PF01817 Chorismate mutase type II CPIN18021_RS07630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPIN18021_RS07630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPIN18021_RS07640 PF01195 Peptidyl-tRNA hydrolase CPIN18021_RS07645 PF14693 Ribosomal protein TL5, C-terminal domain CPIN18021_RS07645 PF01386 Ribosomal L25p family CPIN18021_RS07650 PF00437 Type II/IV secretion system protein CPIN18021_RS07655 PF00923 Transaldolase/Fructose-6-phosphate aldolase CPIN18021_RS07665 PF01584 CheW-like domain CPIN18021_RS07670 PF00072 Response regulator receiver domain CPIN18021_RS07670 PF01627 Hpt domain CPIN18021_RS07670 PF02895 Signal transducing histidine kinase, homodimeric domain CPIN18021_RS07670 PF01584 CheW-like domain CPIN18021_RS07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN18021_RS07675 PF00072 Response regulator receiver domain CPIN18021_RS07675 PF01584 CheW-like domain CPIN18021_RS07685 PF01272 Transcription elongation factor, GreA/GreB, C-term CPIN18021_RS07685 PF03449 Transcription elongation factor, N-terminal CPIN18021_RS07690 PF02684 Lipid-A-disaccharide synthetase CPIN18021_RS07695 PF00899 ThiF family CPIN18021_RS07700 PF01975 Survival protein SurE CPIN18021_RS07705 PF01235 Sodium:alanine symporter family CPIN18021_RS07710 PF03222 Tryptophan/tyrosine permease family CPIN18021_RS07715 PF03315 Serine dehydratase beta chain CPIN18021_RS07715 PF03313 Serine dehydratase alpha chain CPIN18021_RS07725 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS07725 PF00384 Molybdopterin oxidoreductase CPIN18021_RS07725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN18021_RS07730 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPIN18021_RS07730 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS07730 PF00384 Molybdopterin oxidoreductase CPIN18021_RS07730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN18021_RS07730 PF12838 4Fe-4S dicluster domain CPIN18021_RS07735 PF13247 4Fe-4S dicluster domain CPIN18021_RS07740 PF00669 Bacterial flagellin N-terminal helical region CPIN18021_RS07740 PF07196 Flagellin hook IN motif CPIN18021_RS07740 PF00700 Bacterial flagellin C-terminal helical region CPIN18021_RS07755 PF00669 Bacterial flagellin N-terminal helical region CPIN18021_RS07755 PF07196 Flagellin hook IN motif CPIN18021_RS07755 PF00700 Bacterial flagellin C-terminal helical region CPIN18021_RS07760 PF03435 Saccharopine dehydrogenase NADP binding domain CPIN18021_RS07760 PF16653 Saccharopine dehydrogenase C-terminal domain CPIN18021_RS07765 PF01725 Ham1 family CPIN18021_RS07770 PF07690 Major Facilitator Superfamily CPIN18021_RS07775 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPIN18021_RS07775 PF10371 Domain of unknown function CPIN18021_RS07775 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPIN18021_RS07775 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CPIN18021_RS07775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPIN18021_RS07785 PF00881 Nitroreductase family CPIN18021_RS07805 PF00113 Enolase, C-terminal TIM barrel domain CPIN18021_RS07805 PF03952 Enolase, N-terminal domain CPIN18021_RS07810 PF00154 recA bacterial DNA recombination protein CPIN18021_RS07815 PF01235 Sodium:alanine symporter family CPIN18021_RS07820 PF02322 Cytochrome bd terminal oxidase subunit II CPIN18021_RS07825 PF01654 Cytochrome bd terminal oxidase subunit I CPIN18021_RS07835 PF06418 CTP synthase N-terminus CPIN18021_RS07835 PF00117 Glutamine amidotransferase class-I CPIN18021_RS07840 PF17768 RecJ OB domain CPIN18021_RS07840 PF01368 DHH family CPIN18021_RS07840 PF02272 DHHA1 domain CPIN18021_RS07845 PF01555 DNA methylase CPIN18021_RS07855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPIN18021_RS07855 PF02142 MGS-like domain CPIN18021_RS07855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPIN18021_RS07870 PF06689 ClpX C4-type zinc finger CPIN18021_RS07870 PF10431 C-terminal, D2-small domain, of ClpB protein CPIN18021_RS07870 PF07724 AAA domain (Cdc48 subfamily) CPIN18021_RS07875 PF00132 Bacterial transferase hexapeptide (six repeats) CPIN18021_RS07875 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CPIN18021_RS07880 PF07977 FabA-like domain CPIN18021_RS07885 PF07963 Prokaryotic N-terminal methylation motif CPIN18021_RS07885 PF14245 Type IV pilin PilA CPIN18021_RS07900 PF01502 Phosphoribosyl-AMP cyclohydrolase CPIN18021_RS07910 PF01063 Amino-transferase class IV CPIN18021_RS07915 PF00578 AhpC/TSA family CPIN18021_RS07920 PF01361 Tautomerase enzyme CPIN18021_RS07940 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CPIN18021_RS07940 PF17287 POTRA domain CPIN18021_RS07940 PF08479 POTRA domain, ShlB-type CPIN18021_RS07945 PF04829 Pre-toxin domain with VENN motif CPIN18021_RS07945 PF15526 Novel toxin 21 CPIN18021_RS07945 PF15526 Novel toxin 21 CPIN18021_RS07945 PF05860 haemagglutination activity domain CPIN18021_RS07945 PF13332 Hemagglutinin repeat CPIN18021_RS07945 PF13332 Hemagglutinin repeat CPIN18021_RS07945 PF05594 Haemagluttinin repeat CPIN18021_RS07945 PF05594 Haemagluttinin repeat CPIN18021_RS07945 PF04829 Pre-toxin domain with VENN motif CPIN18021_RS07945 PF05860 haemagglutination activity domain CPIN18021_RS07975 PF00465 Iron-containing alcohol dehydrogenase CPIN18021_RS07980 PF01351 Ribonuclease HII CPIN18021_RS08000 PF03062 MBOAT, membrane-bound O-acyltransferase family CPIN18021_RS08010 PF00268 Ribonucleotide reductase, small chain CPIN18021_RS08020 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPIN18021_RS08020 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPIN18021_RS08025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPIN18021_RS08025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPIN18021_RS08025 PF03129 Anticodon binding domain CPIN18021_RS08030 PF05198 Translation initiation factor IF-3, N-terminal domain CPIN18021_RS08030 PF00707 Translation initiation factor IF-3, C-terminal domain CPIN18021_RS08045 PF12804 MobA-like NTP transferase domain CPIN18021_RS08050 PF04991 LicD family CPIN18021_RS08055 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CPIN18021_RS08055 PF00925 GTP cyclohydrolase II CPIN18021_RS08065 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS08065 PF00384 Molybdopterin oxidoreductase CPIN18021_RS08065 PF18364 Molybdopterin oxidoreductase N-terminal domain CPIN18021_RS08080 PF01568 Molydopterin dinucleotide binding domain CPIN18021_RS08080 PF18364 Molybdopterin oxidoreductase N-terminal domain CPIN18021_RS08080 PF00384 Molybdopterin oxidoreductase CPIN18021_RS08120 PF00258 Flavodoxin CPIN18021_RS08125 PF17792 ThiD2 family CPIN18021_RS08125 PF02581 Thiamine monophosphate synthase CPIN18021_RS08130 PF01027 Inhibitor of apoptosis-promoting Bax1 CPIN18021_RS08135 PF00484 Carbonic anhydrase CPIN18021_RS08140 PF00924 Mechanosensitive ion channel CPIN18021_RS08145 PF00990 Diguanylate cyclase, GGDEF domain CPIN18021_RS08145 PF08448 PAS fold CPIN18021_RS08150 PF00990 Diguanylate cyclase, GGDEF domain CPIN18021_RS08150 PF17158 Membrane-associated sensor, integral membrane domain CPIN18021_RS08155 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CPIN18021_RS08155 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CPIN18021_RS08170 PF01261 Xylose isomerase-like TIM barrel CPIN18021_RS08180 PF13193 AMP-binding enzyme C-terminal domain CPIN18021_RS08180 PF00501 AMP-binding enzyme CPIN18021_RS08185 PF00004 ATPase family associated with various cellular activities (AAA) CPIN18021_RS08185 PF17758 Proteasomal ATPase OB N-terminal domain CPIN18021_RS08185 PF16450 Proteasomal ATPase OB C-terminal domain CPIN18021_RS08190 PF03840 Preprotein translocase SecG subunit CPIN18021_RS08195 PF01765 Ribosome recycling factor CPIN18021_RS08200 PF00156 Phosphoribosyl transferase domain CPIN18021_RS08210 PF08534 Redoxin CPIN18021_RS08215 PF08501 Shikimate dehydrogenase substrate binding domain CPIN18021_RS08230 PF00464 Serine hydroxymethyltransferase CPIN18021_RS08235 PF01336 OB-fold nucleic acid binding domain CPIN18021_RS08235 PF00152 tRNA synthetases class II (D, K and N) CPIN18021_RS08240 PF01475 Ferric uptake regulator family CPIN18021_RS08250 PF00437 Type II/IV secretion system protein CPIN18021_RS08255 PF02686 Glu-tRNAGln amidotransferase C subunit CPIN18021_RS08265 PF15437 Plasminogen-binding protein pgbA C-terminal CPIN18021_RS08275 PF03309 Type III pantothenate kinase CPIN18021_RS08295 PF00709 Adenylosuccinate synthetase CPIN18021_RS08300 PF03707 Bacterial signalling protein N terminal repeat CPIN18021_RS08300 PF00990 Diguanylate cyclase, GGDEF domain CPIN18021_RS08300 PF00563 EAL domain CPIN18021_RS08305 PF07687 Peptidase dimerisation domain CPIN18021_RS08305 PF01546 Peptidase family M20/M25/M40 CPIN18021_RS08310 PF03707 Bacterial signalling protein N terminal repeat CPIN18021_RS08310 PF00990 Diguanylate cyclase, GGDEF domain CPIN18021_RS08310 PF00563 EAL domain CPIN18021_RS08315 PF01713 Smr domain CPIN18021_RS08315 PF00488 MutS domain V CPIN18021_RS08330 PF08245 Mur ligase middle domain CPIN18021_RS08330 PF02875 Mur ligase family, glutamate ligase domain CPIN18021_RS08330 PF01225 Mur ligase family, catalytic domain CPIN18021_RS08335 PF00958 GMP synthase C terminal domain CPIN18021_RS08335 PF13673 Acetyltransferase (GNAT) domain CPIN18021_RS08335 PF13302 Acetyltransferase (GNAT) domain CPIN18021_RS08335 PF00117 Glutamine amidotransferase class-I CPIN18021_RS08335 PF03352 Methyladenine glycosylase CPIN18021_RS08355 PF08241 Methyltransferase domain CPIN18021_RS08360 PF13193 AMP-binding enzyme C-terminal domain CPIN18021_RS08360 PF00501 AMP-binding enzyme CPIN18021_RS08380 PF13649 Methyltransferase domain CPIN18021_RS08390 PF02423 Ornithine cyclodeaminase/mu-crystallin family CPIN18021_RS08400 PF00501 AMP-binding enzyme CPIN18021_RS08400 PF13193 AMP-binding enzyme C-terminal domain CPIN18021_RS08420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPIN18021_RS08420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPIN18021_RS08425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPIN18021_RS08425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPIN18021_RS08430 PF00551 Formyl transferase CPIN18021_RS08430 PF02911 Formyl transferase, C-terminal domain CPIN18021_RS08435 PF09940 Domain of unknown function (DUF2172) CPIN18021_RS08435 PF16254 Domain of unknown function (DUF4910) CPIN18021_RS08435 PF16221 winged helix-turn-helix CPIN18021_RS08440 PF13847 Methyltransferase domain CPIN18021_RS08440 PF10119 Predicted methyltransferase regulatory domain CPIN18021_RS08445 PF00669 Bacterial flagellin N-terminal helical region CPIN18021_RS08445 PF00700 Bacterial flagellin C-terminal helical region CPIN18021_RS08445 PF07196 Flagellin hook IN motif CPIN18021_RS08460 PF00669 Bacterial flagellin N-terminal helical region CPIN18021_RS08460 PF07196 Flagellin hook IN motif CPIN18021_RS08460 PF00700 Bacterial flagellin C-terminal helical region CPIN18021_RS08475 PF07196 Flagellin hook IN motif CPIN18021_RS08475 PF00669 Bacterial flagellin N-terminal helical region CPIN18021_RS08475 PF00700 Bacterial flagellin C-terminal helical region CPIN18021_RS08485 PF03653 Uncharacterised protein family (UPF0093) CPIN18021_RS08495 PF01252 Signal peptidase (SPase) II CPIN18021_RS08500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPIN18021_RS08500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPIN18021_RS08500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPIN18021_RS08500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPIN18021_RS08510 PF08495 FIST N domain CPIN18021_RS08510 PF00563 EAL domain CPIN18021_RS08510 PF10442 FIST C domain CPIN18021_RS08510 PF00990 Diguanylate cyclase, GGDEF domain CPIN18021_RS08515 PF14376 Haem-binding domain CPIN18021_RS08515 PF00034 Cytochrome c CPIN18021_RS08515 PF03150 Di-haem cytochrome c peroxidase CPIN18021_RS08530 PF00719 Inorganic pyrophosphatase CPIN18021_RS08565 PF02511 Thymidylate synthase complementing protein CPIN18021_RS08580 PF00478 IMP dehydrogenase / GMP reductase domain CPIN18021_RS08580 PF00571 CBS domain CPIN18021_RS08585 PF01425 Amidase CPIN18021_RS08590 PF00133 tRNA synthetases class I (I, L, M and V) CPIN18021_RS08590 PF08264 Anticodon-binding domain of tRNA CPIN18021_RS08595 PF02464 Competence-damaged protein CPIN18021_RS08595 PF18146 Damage-inducible protein CinA KH domain CPIN18021_RS08595 PF00994 Probable molybdopterin binding domain CPIN18021_RS08600 PF03167 Uracil DNA glycosylase superfamily CPIN18021_RS08605 PF01016 Ribosomal L27 protein CPIN18021_RS08610 PF00829 Ribosomal prokaryotic L21 protein CPIN18021_RS08615 PF00034 Cytochrome c CPIN18021_RS08615 PF03150 Di-haem cytochrome c peroxidase CPIN18021_RS08620 PF01312 FlhB HrpN YscU SpaS Family CPIN18021_RS08630 PF02699 Preprotein translocase subunit CPIN18021_RS08635 PF02355 Protein export membrane protein CPIN18021_RS08640 PF07549 SecD/SecF GG Motif CPIN18021_RS08640 PF02355 Protein export membrane protein CPIN18021_RS08650 PF09334 tRNA synthetases class I (M) CPIN18021_RS08650 PF08264 Anticodon-binding domain of tRNA CPIN18021_RS08650 PF00133 tRNA synthetases class I (I, L, M and V) CPIN18021_RS08650 PF13603 Leucyl-tRNA synthetase, Domain 2 CPIN18021_RS08660 PF00990 Diguanylate cyclase, GGDEF domain CPIN18021_RS08670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN18021_RS08670 PF00672 HAMP domain CPIN18021_RS08670 PF02743 Cache domain CPIN18021_RS08675 PF00156 Phosphoribosyl transferase domain CPIN18021_RS08675 PF13537 Glutamine amidotransferase domain CPIN18021_RS08680 PF01113 Dihydrodipicolinate reductase, N-terminus CPIN18021_RS08680 PF05173 Dihydrodipicolinate reductase, C-terminus CPIN18021_RS08685 PF03471 Transporter associated domain CPIN18021_RS08685 PF00571 CBS domain CPIN18021_RS08685 PF01595 Cyclin M transmembrane N-terminal domain CPIN18021_RS08690 PF01042 Endoribonuclease L-PSP CPIN18021_RS08695 PF00529 HlyD membrane-fusion protein of T1SS CPIN18021_RS08695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPIN18021_RS08700 PF00873 AcrB/AcrD/AcrF family CPIN18021_RS08705 PF02321 Outer membrane efflux protein CPIN18021_RS08715 PF00764 Arginosuccinate synthase CPIN18021_RS08720 PF08275 DNA primase catalytic core, N-terminal domain CPIN18021_RS08720 PF01807 CHC2 zinc finger CPIN18021_RS08730 PF00075 RNase H CPIN18021_RS08735 PF00035 Double-stranded RNA binding motif CPIN18021_RS08735 PF14622 Ribonuclease-III-like CPIN18021_RS08740 PF01264 Chorismate synthase CPIN18021_RS08750 PF02075 Crossover junction endodeoxyribonuclease RuvC