locus-tag class description CPIN17261_RS00005 PF00308 Bacterial dnaA protein CPIN17261_RS00005 PF11638 DnaA N-terminal domain CPIN17261_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CPIN17261_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CPIN17261_RS00010 PF02767 DNA polymerase III beta subunit, central domain CPIN17261_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CPIN17261_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN17261_RS00015 PF01751 Toprim domain CPIN17261_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus CPIN17261_RS00015 PF00204 DNA gyrase B CPIN17261_RS00025 PF14489 QueF-like protein CPIN17261_RS00050 PF00849 RNA pseudouridylate synthase CPIN17261_RS00050 PF01479 S4 domain CPIN17261_RS00055 PF01380 SIS domain CPIN17261_RS00055 PF00571 CBS domain CPIN17261_RS00060 PF00753 Metallo-beta-lactamase superfamily CPIN17261_RS00060 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CPIN17261_RS00060 PF17770 Ribonuclease J C-terminal domain CPIN17261_RS00065 PF00398 Ribosomal RNA adenine dimethylase CPIN17261_RS00085 PF04055 Radical SAM superfamily CPIN17261_RS00090 PF00849 RNA pseudouridylate synthase CPIN17261_RS00095 PF10397 Adenylosuccinate lyase C-terminus CPIN17261_RS00095 PF00206 Lyase CPIN17261_RS00100 PF03477 ATP cone domain CPIN17261_RS00100 PF02867 Ribonucleotide reductase, barrel domain CPIN17261_RS00100 PF00317 Ribonucleotide reductase, all-alpha domain CPIN17261_RS00105 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPIN17261_RS00105 PF03477 ATP cone domain CPIN17261_RS00115 PF01297 Zinc-uptake complex component A periplasmic CPIN17261_RS00125 PF00005 ABC transporter CPIN17261_RS00130 PF00950 ABC 3 transport family CPIN17261_RS00135 PF00199 Catalase CPIN17261_RS00135 PF06628 Catalase-related immune-responsive CPIN17261_RS00140 PF00593 TonB dependent receptor CPIN17261_RS00140 PF07715 TonB-dependent Receptor Plug Domain CPIN17261_RS00145 PF02130 Uncharacterized protein family UPF0054 CPIN17261_RS00150 PF06508 Queuosine biosynthesis protein QueC CPIN17261_RS00165 PF00023 Ankyrin repeat CPIN17261_RS00165 PF12796 Ankyrin repeats (3 copies) CPIN17261_RS00175 PF03063 Prismane/CO dehydrogenase family CPIN17261_RS00180 PF11412 Disulphide bond corrector protein DsbC CPIN17261_RS00180 PF02683 Cytochrome C biogenesis protein transmembrane region CPIN17261_RS00180 PF00085 Thioredoxin CPIN17261_RS00185 PF03239 Iron permease FTR1 family CPIN17261_RS00190 PF10634 Fe2+ transport protein CPIN17261_RS00210 PF12704 MacB-like periplasmic core domain CPIN17261_RS00210 PF02687 FtsX-like permease family CPIN17261_RS00210 PF00005 ABC transporter CPIN17261_RS00225 PF02677 Epoxyqueuosine reductase QueH CPIN17261_RS00230 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CPIN17261_RS00235 PF00857 Isochorismatase family CPIN17261_RS00240 PF14537 Cytochrome c3 CPIN17261_RS00240 PF00890 FAD binding domain CPIN17261_RS00255 PF04264 YceI-like domain CPIN17261_RS00260 PF18269 T3SS EscN ATPase C-terminal domain CPIN17261_RS00260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPIN17261_RS00265 PF01227 GTP cyclohydrolase I CPIN17261_RS00270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPIN17261_RS00270 PF05698 Bacterial trigger factor protein (TF) C-terminus CPIN17261_RS00270 PF05697 Bacterial trigger factor protein (TF) CPIN17261_RS00275 PF00574 Clp protease CPIN17261_RS00285 PF01327 Polypeptide deformylase CPIN17261_RS00290 PF01078 Magnesium chelatase, subunit ChlI CPIN17261_RS00290 PF13335 Magnesium chelatase, subunit ChlI C-terminal CPIN17261_RS00295 PF03853 YjeF-related protein N-terminus CPIN17261_RS00295 PF01256 Carbohydrate kinase CPIN17261_RS00300 PF00551 Formyl transferase CPIN17261_RS00320 PF05681 Fumarate hydratase (Fumerase) CPIN17261_RS00345 PF00005 ABC transporter CPIN17261_RS00350 PF07690 Major Facilitator Superfamily CPIN17261_RS00355 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPIN17261_RS00360 PF01029 NusB family CPIN17261_RS00365 PF00885 6,7-dimethyl-8-ribityllumazine synthase CPIN17261_RS00370 PF00793 DAHP synthetase I family CPIN17261_RS00380 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CPIN17261_RS00380 PF01926 50S ribosome-binding GTPase CPIN17261_RS00385 PF01202 Shikimate kinase CPIN17261_RS00390 PF00579 tRNA synthetases class I (W and Y) CPIN17261_RS00395 PF02403 Seryl-tRNA synthetase N-terminal domain CPIN17261_RS00395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPIN17261_RS00405 PF03741 Integral membrane protein TerC family CPIN17261_RS00410 PF02743 Cache domain CPIN17261_RS00410 PF00672 HAMP domain CPIN17261_RS00410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN17261_RS00425 PF02785 Biotin carboxylase C-terminal domain CPIN17261_RS00425 PF00289 Biotin carboxylase, N-terminal domain CPIN17261_RS00425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPIN17261_RS00430 PF00364 Biotin-requiring enzyme CPIN17261_RS00435 PF00692 dUTPase CPIN17261_RS00440 PF02719 Polysaccharide biosynthesis protein CPIN17261_RS00445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPIN17261_RS00450 PF02348 Cytidylyltransferase CPIN17261_RS00460 PF02110 Hydroxyethylthiazole kinase family CPIN17261_RS00465 PF00338 Ribosomal protein S10p/S20e CPIN17261_RS00470 PF00297 Ribosomal protein L3 CPIN17261_RS00475 PF00573 Ribosomal protein L4/L1 family CPIN17261_RS00480 PF00276 Ribosomal protein L23 CPIN17261_RS00485 PF03947 Ribosomal Proteins L2, C-terminal domain CPIN17261_RS00485 PF00181 Ribosomal Proteins L2, RNA binding domain CPIN17261_RS00490 PF00203 Ribosomal protein S19 CPIN17261_RS00495 PF00237 Ribosomal protein L22p/L17e CPIN17261_RS00500 PF00189 Ribosomal protein S3, C-terminal domain CPIN17261_RS00500 PF07650 KH domain CPIN17261_RS00505 PF00252 Ribosomal protein L16p/L10e CPIN17261_RS00510 PF00831 Ribosomal L29 protein CPIN17261_RS00515 PF00366 Ribosomal protein S17 CPIN17261_RS00520 PF00238 Ribosomal protein L14p/L23e CPIN17261_RS00525 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CPIN17261_RS00525 PF00467 KOW motif CPIN17261_RS00530 PF00673 ribosomal L5P family C-terminus CPIN17261_RS00530 PF00281 Ribosomal protein L5 CPIN17261_RS00535 PF00253 Ribosomal protein S14p/S29e CPIN17261_RS00540 PF00410 Ribosomal protein S8 CPIN17261_RS00545 PF00347 Ribosomal protein L6 CPIN17261_RS00550 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CPIN17261_RS00555 PF03719 Ribosomal protein S5, C-terminal domain CPIN17261_RS00555 PF00333 Ribosomal protein S5, N-terminal domain CPIN17261_RS00560 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CPIN17261_RS00565 PF00344 SecY translocase CPIN17261_RS00570 PF00557 Metallopeptidase family M24 CPIN17261_RS00575 PF00672 HAMP domain CPIN17261_RS00575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN17261_RS00575 PF02743 Cache domain CPIN17261_RS00580 PF17202 Single cache domain 3 CPIN17261_RS00580 PF00672 HAMP domain CPIN17261_RS00580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN17261_RS00585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN17261_RS00585 PF07196 Flagellin hook IN motif CPIN17261_RS00585 PF00460 Flagella basal body rod protein CPIN17261_RS00585 PF07559 Flagellar basal body protein FlaE CPIN17261_RS00590 PF05670 NFACT protein RNA binding domain CPIN17261_RS00605 PF13288 DXP reductoisomerase C-terminal domain CPIN17261_RS00605 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CPIN17261_RS00605 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CPIN17261_RS00610 PF00860 Permease family CPIN17261_RS00620 PF00814 Glycoprotease family CPIN17261_RS00625 PF03102 NeuB family CPIN17261_RS00625 PF08666 SAF domain CPIN17261_RS00640 PF09285 Elongation factor P, C-terminal CPIN17261_RS00640 PF08207 Elongation factor P (EF-P) KOW-like domain CPIN17261_RS00640 PF01132 Elongation factor P (EF-P) OB domain CPIN17261_RS00650 PF01197 Ribosomal protein L31 CPIN17261_RS00655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPIN17261_RS00680 PF00742 Homoserine dehydrogenase CPIN17261_RS00680 PF03447 Homoserine dehydrogenase, NAD binding domain CPIN17261_RS00680 PF01842 ACT domain CPIN17261_RS00685 PF02021 Uncharacterised protein family UPF0102 CPIN17261_RS00690 PF00085 Thioredoxin CPIN17261_RS00700 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPIN17261_RS00705 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CPIN17261_RS00710 PF00109 Beta-ketoacyl synthase, N-terminal domain CPIN17261_RS00710 PF02801 Beta-ketoacyl synthase, C-terminal domain CPIN17261_RS00715 PF00550 Phosphopantetheine attachment site CPIN17261_RS00725 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CPIN17261_RS00725 PF01676 Metalloenzyme superfamily CPIN17261_RS00730 PF00953 Glycosyl transferase family 4 CPIN17261_RS00730 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CPIN17261_RS00735 PF08245 Mur ligase middle domain CPIN17261_RS00750 PF03062 MBOAT, membrane-bound O-acyltransferase family CPIN17261_RS00755 PF02938 GAD domain CPIN17261_RS00755 PF00152 tRNA synthetases class II (D, K and N) CPIN17261_RS00755 PF01336 OB-fold nucleic acid binding domain CPIN17261_RS00765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CPIN17261_RS00765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CPIN17261_RS00770 PF06434 Aconitate hydratase 2 N-terminus CPIN17261_RS00770 PF11791 Aconitate B N-terminal domain CPIN17261_RS00770 PF00330 Aconitase family (aconitate hydratase) CPIN17261_RS00780 PF00106 short chain dehydrogenase CPIN17261_RS00785 PF03553 Na+/H+ antiporter family CPIN17261_RS00790 PF05958 tRNA (Uracil-5-)-methyltransferase CPIN17261_RS00795 PF13380 CoA binding domain CPIN17261_RS00800 PF13291 ACT domain CPIN17261_RS00800 PF00291 Pyridoxal-phosphate dependent enzyme CPIN17261_RS00815 PF04324 BFD-like [2Fe-2S] binding domain CPIN17261_RS00815 PF01592 NifU-like N terminal domain CPIN17261_RS00815 PF01106 NifU-like domain CPIN17261_RS00820 PF00266 Aminotransferase class-V CPIN17261_RS00825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN17261_RS00825 PF16591 Helical bimodular sensor domain CPIN17261_RS00825 PF00672 HAMP domain CPIN17261_RS00830 PF02621 Menaquinone biosynthesis CPIN17261_RS00835 PF01313 Bacterial export proteins, family 3 CPIN17261_RS00840 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CPIN17261_RS00850 PF02132 RecR protein CPIN17261_RS00850 PF13662 Toprim domain CPIN17261_RS00860 PF00072 Response regulator receiver domain CPIN17261_RS00860 PF00486 Transcriptional regulatory protein, C terminal CPIN17261_RS00865 PF00005 ABC transporter CPIN17261_RS00865 PF12848 ABC transporter CPIN17261_RS00870 PF00005 ABC transporter CPIN17261_RS00870 PF16326 ABC transporter C-terminal domain CPIN17261_RS00870 PF12848 ABC transporter CPIN17261_RS00875 PF00271 Helicase conserved C-terminal domain CPIN17261_RS00875 PF02559 CarD-like/TRCF domain CPIN17261_RS00875 PF03461 TRCF domain CPIN17261_RS00875 PF00270 DEAD/DEAH box helicase CPIN17261_RS00875 PF17757 UvrB interaction domain CPIN17261_RS00890 PF00291 Pyridoxal-phosphate dependent enzyme CPIN17261_RS00895 PF00132 Bacterial transferase hexapeptide (six repeats) CPIN17261_RS00940 PF07498 Rho termination factor, N-terminal domain CPIN17261_RS00940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPIN17261_RS00940 PF07497 Rho termination factor, RNA-binding domain CPIN17261_RS00945 PF01219 Prokaryotic diacylglycerol kinase CPIN17261_RS00950 PF06965 Na+/H+ antiporter 1 CPIN17261_RS00955 PF00884 Sulfatase CPIN17261_RS00970 PF03466 LysR substrate binding domain CPIN17261_RS00970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPIN17261_RS00975 PF00890 FAD binding domain CPIN17261_RS00975 PF14537 Cytochrome c3 CPIN17261_RS00980 PF14537 Cytochrome c3 CPIN17261_RS00980 PF00890 FAD binding domain CPIN17261_RS00990 PF03264 NapC/NirT cytochrome c family, N-terminal region CPIN17261_RS01000 PF01176 Translation initiation factor 1A / IF-1 CPIN17261_RS01005 PF00444 Ribosomal protein L36 CPIN17261_RS01010 PF00416 Ribosomal protein S13/S18 CPIN17261_RS01015 PF00411 Ribosomal protein S11 CPIN17261_RS01020 PF00163 Ribosomal protein S4/S9 N-terminal domain CPIN17261_RS01020 PF01479 S4 domain CPIN17261_RS01025 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CPIN17261_RS01025 PF01000 RNA polymerase Rpb3/RpoA insert domain CPIN17261_RS01025 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CPIN17261_RS01030 PF01196 Ribosomal protein L17 CPIN17261_RS01035 PF10615 Protein of unknown function (DUF2470) CPIN17261_RS01035 PF01243 Pyridoxamine 5'-phosphate oxidase CPIN17261_RS01045 PF01464 Transglycosylase SLT domain CPIN17261_RS01045 PF01551 Peptidase family M23 CPIN17261_RS01045 PF10145 Phage-related minor tail protein CPIN17261_RS01050 PF00571 CBS domain CPIN17261_RS01050 PF03448 MgtE intracellular N domain CPIN17261_RS01050 PF01769 Divalent cation transporter CPIN17261_RS01055 PF00293 NUDIX domain CPIN17261_RS01065 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS01065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN17261_RS01065 PF00384 Molybdopterin oxidoreductase CPIN17261_RS01070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN17261_RS01070 PF00384 Molybdopterin oxidoreductase CPIN17261_RS01070 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS01080 PF01661 Macro domain CPIN17261_RS01080 PF16193 AAA C-terminal domain CPIN17261_RS01080 PF12002 MgsA AAA+ ATPase C terminal CPIN17261_RS01080 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPIN17261_RS01085 PF01967 MoaC family CPIN17261_RS01100 PF03652 Holliday junction resolvase CPIN17261_RS01105 PF00005 ABC transporter CPIN17261_RS01120 PF12951 Passenger-associated-transport-repeat CPIN17261_RS01120 PF00082 Subtilase family CPIN17261_RS01120 PF03797 Autotransporter beta-domain CPIN17261_RS01140 PF14743 DNA ligase OB-like domain CPIN17261_RS01140 PF01068 ATP dependent DNA ligase domain CPIN17261_RS01145 PF02253 Phospholipase A1 CPIN17261_RS01150 PF12804 MobA-like NTP transferase domain CPIN17261_RS01165 PF02554 Carbon starvation protein CstA CPIN17261_RS01165 PF13722 5TM C-terminal transporter carbon starvation CstA CPIN17261_RS01175 PF02374 Anion-transporting ATPase CPIN17261_RS01195 PF02548 Ketopantoate hydroxymethyltransferase CPIN17261_RS01200 PF13302 Acetyltransferase (GNAT) domain CPIN17261_RS01205 PF13247 4Fe-4S dicluster domain CPIN17261_RS01210 PF00361 Proton-conducting membrane transporter CPIN17261_RS01215 PF00146 NADH dehydrogenase CPIN17261_RS01220 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CPIN17261_RS01225 PF00361 Proton-conducting membrane transporter CPIN17261_RS01225 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPIN17261_RS01230 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CPIN17261_RS01230 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CPIN17261_RS01230 PF00374 Nickel-dependent hydrogenase CPIN17261_RS01240 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CPIN17261_RS01255 PF01226 Formate/nitrite transporter CPIN17261_RS01270 PF05935 Arylsulfotransferase (ASST) CPIN17261_RS01270 PF17425 Arylsulfotransferase Ig-like domain CPIN17261_RS01285 PF00380 Ribosomal protein S9/S16 CPIN17261_RS01290 PF00572 Ribosomal protein L13 CPIN17261_RS01295 PF13361 UvrD-like helicase C-terminal domain CPIN17261_RS01295 PF00580 UvrD/REP helicase N-terminal domain CPIN17261_RS01295 PF12705 PD-(D/E)XK nuclease superfamily CPIN17261_RS01320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CPIN17261_RS01320 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CPIN17261_RS01335 PF00115 Cytochrome C and Quinol oxidase polypeptide I CPIN17261_RS01345 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPIN17261_RS01345 PF00117 Glutamine amidotransferase class-I CPIN17261_RS01355 PF08448 PAS fold CPIN17261_RS01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN17261_RS01355 PF08447 PAS fold CPIN17261_RS01360 PF00072 Response regulator receiver domain CPIN17261_RS01360 PF00486 Transcriptional regulatory protein, C terminal CPIN17261_RS01395 PF00005 ABC transporter CPIN17261_RS01395 PF17755 UvrA DNA-binding domain CPIN17261_RS01395 PF17760 UvrA interaction domain CPIN17261_RS01410 PF00037 4Fe-4S binding domain CPIN17261_RS01415 PF00334 Nucleoside diphosphate kinase CPIN17261_RS01425 PF01783 Ribosomal L32p protein family CPIN17261_RS01430 PF02504 Fatty acid synthesis protein CPIN17261_RS01435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPIN17261_RS01435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPIN17261_RS01445 PF00762 Ferrochelatase CPIN17261_RS01450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPIN17261_RS01450 PF01411 tRNA synthetases class II (A) CPIN17261_RS01450 PF02272 DHHA1 domain CPIN17261_RS01460 PF02545 Maf-like protein CPIN17261_RS01465 PF00905 Penicillin binding protein transpeptidase domain CPIN17261_RS01465 PF17092 Penicillin-binding protein OB-like domain CPIN17261_RS01465 PF00912 Transglycosylase CPIN17261_RS01470 PF01063 Amino-transferase class IV CPIN17261_RS01475 PF00425 chorismate binding enzyme CPIN17261_RS01490 PF00679 Elongation factor G C-terminus CPIN17261_RS01490 PF14492 Elongation Factor G, domain II CPIN17261_RS01490 PF00009 Elongation factor Tu GTP binding domain CPIN17261_RS01490 PF03764 Elongation factor G, domain IV CPIN17261_RS01490 PF03144 Elongation factor Tu domain 2 CPIN17261_RS01495 PF00177 Ribosomal protein S7p/S5e CPIN17261_RS01500 PF00164 Ribosomal protein S12/S23 CPIN17261_RS01505 PF00440 Bacterial regulatory proteins, tetR family CPIN17261_RS01515 PF01165 Ribosomal protein S21 CPIN17261_RS01530 PF03738 Glutathionylspermidine synthase preATP-grasp CPIN17261_RS01535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPIN17261_RS01535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPIN17261_RS01540 PF04461 Protein of unknown function (DUF520) CPIN17261_RS01545 PF04055 Radical SAM superfamily CPIN17261_RS01545 PF06969 HemN C-terminal domain CPIN17261_RS01565 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS01565 PF00384 Molybdopterin oxidoreductase CPIN17261_RS01565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN17261_RS01570 PF12838 4Fe-4S dicluster domain CPIN17261_RS01575 PF12801 4Fe-4S binding domain CPIN17261_RS01575 PF12837 4Fe-4S binding domain CPIN17261_RS01580 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CPIN17261_RS01600 PF00210 Ferritin-like domain CPIN17261_RS01615 PF05736 OprF membrane domain CPIN17261_RS01615 PF00691 OmpA family CPIN17261_RS01620 PF13419 Haloacid dehalogenase-like hydrolase CPIN17261_RS01625 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPIN17261_RS01625 PF03625 Domain of unknown function DUF302 CPIN17261_RS01630 PF01370 NAD dependent epimerase/dehydratase family CPIN17261_RS01635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPIN17261_RS01640 PF00005 ABC transporter CPIN17261_RS01640 PF02687 FtsX-like permease family CPIN17261_RS01640 PF12704 MacB-like periplasmic core domain CPIN17261_RS01645 PF07963 Prokaryotic N-terminal methylation motif CPIN17261_RS01645 PF14245 Type IV pilin PilA CPIN17261_RS01650 PF07963 Prokaryotic N-terminal methylation motif CPIN17261_RS01650 PF08334 Type II secretion system (T2SS), protein G CPIN17261_RS01655 PF07963 Prokaryotic N-terminal methylation motif CPIN17261_RS01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN17261_RS01665 PF00512 His Kinase A (phospho-acceptor) domain CPIN17261_RS01665 PF07689 KaiB domain CPIN17261_RS01670 PF00486 Transcriptional regulatory protein, C terminal CPIN17261_RS01670 PF00072 Response regulator receiver domain CPIN17261_RS01675 PF03916 Polysulphide reductase, NrfD CPIN17261_RS01680 PF13247 4Fe-4S dicluster domain CPIN17261_RS01685 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN17261_RS01685 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS01685 PF10518 TAT (twin-arginine translocation) pathway signal sequence CPIN17261_RS01685 PF00384 Molybdopterin oxidoreductase CPIN17261_RS01695 PF01678 Diaminopimelate epimerase CPIN17261_RS01700 PF01121 Dephospho-CoA kinase CPIN17261_RS01705 PF00586 AIR synthase related protein, N-terminal domain CPIN17261_RS01705 PF02769 AIR synthase related protein, C-terminal domain CPIN17261_RS01710 PF01648 4'-phosphopantetheinyl transferase superfamily CPIN17261_RS01715 PF03748 Flagellar basal body-associated protein FliL CPIN17261_RS01720 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CPIN17261_RS01720 PF03900 Porphobilinogen deaminase, C-terminal domain CPIN17261_RS01735 PF03129 Anticodon binding domain CPIN17261_RS01735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPIN17261_RS01735 PF04073 Aminoacyl-tRNA editing domain CPIN17261_RS01740 PF01488 Shikimate / quinate 5-dehydrogenase CPIN17261_RS01740 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CPIN17261_RS01740 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CPIN17261_RS01745 PF00348 Polyprenyl synthetase CPIN17261_RS01755 PF13419 Haloacid dehalogenase-like hydrolase CPIN17261_RS01765 PF00460 Flagella basal body rod protein CPIN17261_RS01765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN17261_RS01765 PF07559 Flagellar basal body protein FlaE CPIN17261_RS01780 PF00679 Elongation factor G C-terminus CPIN17261_RS01780 PF03144 Elongation factor Tu domain 2 CPIN17261_RS01780 PF00009 Elongation factor Tu GTP binding domain CPIN17261_RS01790 PF07963 Prokaryotic N-terminal methylation motif CPIN17261_RS01790 PF00114 Pilin (bacterial filament) CPIN17261_RS01800 PF00156 Phosphoribosyl transferase domain CPIN17261_RS01805 PF00860 Permease family CPIN17261_RS01810 PF04055 Radical SAM superfamily CPIN17261_RS01820 PF01380 SIS domain CPIN17261_RS01825 PF01625 Peptide methionine sulfoxide reductase CPIN17261_RS01825 PF01641 SelR domain CPIN17261_RS01830 PF01012 Electron transfer flavoprotein domain CPIN17261_RS01835 PF00766 Electron transfer flavoprotein FAD-binding domain CPIN17261_RS01835 PF01012 Electron transfer flavoprotein domain CPIN17261_RS01840 PF00378 Enoyl-CoA hydratase/isomerase CPIN17261_RS01850 PF07859 alpha/beta hydrolase fold CPIN17261_RS01855 PF02028 BCCT, betaine/carnitine/choline family transporter CPIN17261_RS01860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPIN17261_RS01860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPIN17261_RS01860 PF02770 Acyl-CoA dehydrogenase, middle domain CPIN17261_RS01865 PF02515 CoA-transferase family III CPIN17261_RS01870 PF00501 AMP-binding enzyme CPIN17261_RS01870 PF13193 AMP-binding enzyme C-terminal domain CPIN17261_RS01875 PF01494 FAD binding domain CPIN17261_RS01915 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPIN17261_RS01920 PF00390 Malic enzyme, N-terminal domain CPIN17261_RS01920 PF03949 Malic enzyme, NAD binding domain CPIN17261_RS01920 PF01515 Phosphate acetyl/butaryl transferase CPIN17261_RS01930 PF01926 50S ribosome-binding GTPase CPIN17261_RS01930 PF01018 GTP1/OBG CPIN17261_RS01950 PF14743 DNA ligase OB-like domain CPIN17261_RS01950 PF01068 ATP dependent DNA ligase domain CPIN17261_RS01955 PF02253 Phospholipase A1 CPIN17261_RS01960 PF12804 MobA-like NTP transferase domain CPIN17261_RS01975 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPIN17261_RS01975 PF14572 Phosphoribosyl synthetase-associated domain CPIN17261_RS01980 PF04055 Radical SAM superfamily CPIN17261_RS01995 PF04073 Aminoacyl-tRNA editing domain CPIN17261_RS02005 PF00449 Urease alpha-subunit, N-terminal domain CPIN17261_RS02005 PF01979 Amidohydrolase family CPIN17261_RS02010 PF00547 Urease, gamma subunit CPIN17261_RS02010 PF00699 Urease beta subunit CPIN17261_RS02015 PF00547 Urease, gamma subunit CPIN17261_RS02020 PF01774 UreD urease accessory protein CPIN17261_RS02025 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPIN17261_RS02030 PF01730 UreF CPIN17261_RS02035 PF02814 UreE urease accessory protein, N-terminal domain CPIN17261_RS02035 PF05194 UreE urease accessory protein, C-terminal domain CPIN17261_RS02040 PF00082 Subtilase family CPIN17261_RS02040 PF03797 Autotransporter beta-domain CPIN17261_RS02050 PF01638 HxlR-like helix-turn-helix CPIN17261_RS02055 PF00465 Iron-containing alcohol dehydrogenase CPIN17261_RS02065 PF00881 Nitroreductase family CPIN17261_RS02070 PF00258 Flavodoxin CPIN17261_RS02075 PF04055 Radical SAM superfamily CPIN17261_RS02075 PF06968 Biotin and Thiamin Synthesis associated domain CPIN17261_RS02105 PF02906 Iron only hydrogenase large subunit, C-terminal domain CPIN17261_RS02105 PF12838 4Fe-4S dicluster domain CPIN17261_RS02105 PF02256 Iron hydrogenase small subunit CPIN17261_RS02115 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS02115 PF18364 Molybdopterin oxidoreductase N-terminal domain CPIN17261_RS02115 PF00384 Molybdopterin oxidoreductase CPIN17261_RS02120 PF02906 Iron only hydrogenase large subunit, C-terminal domain CPIN17261_RS02120 PF00037 4Fe-4S binding domain CPIN17261_RS02135 PF04055 Radical SAM superfamily CPIN17261_RS02135 PF06968 Biotin and Thiamin Synthesis associated domain CPIN17261_RS02140 PF04055 Radical SAM superfamily CPIN17261_RS02140 PF06968 Biotin and Thiamin Synthesis associated domain CPIN17261_RS02145 PF10396 GTP-binding protein TrmE N-terminus CPIN17261_RS02145 PF12631 MnmE helical domain CPIN17261_RS02145 PF01926 50S ribosome-binding GTPase CPIN17261_RS02150 PF01131 DNA topoisomerase CPIN17261_RS02150 PF01396 Topoisomerase DNA binding C4 zinc finger CPIN17261_RS02150 PF01751 Toprim domain CPIN17261_RS02160 PF03605 Anaerobic c4-dicarboxylate membrane transporter CPIN17261_RS02170 PF00005 ABC transporter CPIN17261_RS02175 PF01497 Periplasmic binding protein CPIN17261_RS02180 PF04055 Radical SAM superfamily CPIN17261_RS02190 PF00318 Ribosomal protein S2 CPIN17261_RS02195 PF00889 Elongation factor TS CPIN17261_RS02200 PF00005 ABC transporter CPIN17261_RS02205 PF01311 Bacterial export proteins, family 1 CPIN17261_RS02215 PF00625 Guanylate kinase CPIN17261_RS02220 PF02416 mttA/Hcf106 family CPIN17261_RS02225 PF03485 Arginyl tRNA synthetase N terminal domain CPIN17261_RS02225 PF05746 DALR anticodon binding domain CPIN17261_RS02225 PF00750 tRNA synthetases class I (R) CPIN17261_RS02230 PF03601 Conserved hypothetical protein 698 CPIN17261_RS02240 PF00355 Rieske [2Fe-2S] domain CPIN17261_RS02240 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CPIN17261_RS02245 PF00032 Cytochrome b(C-terminal)/b6/petD CPIN17261_RS02245 PF00033 Cytochrome b/b6/petB CPIN17261_RS02255 PF02630 SCO1/SenC CPIN17261_RS02280 PF01168 Alanine racemase, N-terminal domain CPIN17261_RS02280 PF00842 Alanine racemase, C-terminal domain CPIN17261_RS02290 PF01556 DnaJ C terminal domain CPIN17261_RS02290 PF00226 DnaJ domain CPIN17261_RS02290 PF00684 DnaJ central domain CPIN17261_RS02305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPIN17261_RS02305 PF00476 DNA polymerase family A CPIN17261_RS02305 PF01367 5'-3' exonuclease, C-terminal SAM fold CPIN17261_RS02310 PF03951 Glutamine synthetase, beta-Grasp domain CPIN17261_RS02310 PF00120 Glutamine synthetase, catalytic domain CPIN17261_RS02320 PF01136 Peptidase family U32 CPIN17261_RS02325 PF00731 AIR carboxylase CPIN17261_RS02335 PF02091 Glycyl-tRNA synthetase alpha subunit CPIN17261_RS02340 PF01784 NIF3 (NGG1p interacting factor 3) CPIN17261_RS02350 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CPIN17261_RS02350 PF00534 Glycosyl transferases group 1 CPIN17261_RS02355 PF00849 RNA pseudouridylate synthase CPIN17261_RS02360 PF00448 SRP54-type protein, GTPase domain CPIN17261_RS02360 PF02978 Signal peptide binding domain CPIN17261_RS02360 PF02881 SRP54-type protein, helical bundle domain CPIN17261_RS02365 PF00886 Ribosomal protein S16 CPIN17261_RS02375 PF01782 RimM N-terminal domain CPIN17261_RS02380 PF01746 tRNA (Guanine-1)-methyltransferase CPIN17261_RS02385 PF01245 Ribosomal protein L19 CPIN17261_RS02390 PF05538 Campylobacter major outer membrane protein CPIN17261_RS02400 PF17425 Arylsulfotransferase Ig-like domain CPIN17261_RS02400 PF05935 Arylsulfotransferase (ASST) CPIN17261_RS02405 PF17425 Arylsulfotransferase Ig-like domain CPIN17261_RS02405 PF05935 Arylsulfotransferase (ASST) CPIN17261_RS02410 PF01323 DSBA-like thioredoxin domain CPIN17261_RS02415 PF02600 Disulfide bond formation protein DsbB CPIN17261_RS02425 PF00486 Transcriptional regulatory protein, C terminal CPIN17261_RS02425 PF00072 Response regulator receiver domain CPIN17261_RS02445 PF14743 DNA ligase OB-like domain CPIN17261_RS02445 PF01068 ATP dependent DNA ligase domain CPIN17261_RS02455 PF00174 Oxidoreductase molybdopterin binding domain CPIN17261_RS02470 PF00155 Aminotransferase class I and II CPIN17261_RS02485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN17261_RS02485 PF00460 Flagella basal body rod protein CPIN17261_RS02490 PF00460 Flagella basal body rod protein CPIN17261_RS02490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN17261_RS02495 PF04542 Sigma-70 region 2 CPIN17261_RS02495 PF04539 Sigma-70 region 3 CPIN17261_RS02495 PF00140 Sigma-70 factor, region 1.2 CPIN17261_RS02495 PF04545 Sigma-70, region 4 CPIN17261_RS02510 PF02660 Glycerol-3-phosphate acyltransferase CPIN17261_RS02520 PF00072 Response regulator receiver domain CPIN17261_RS02520 PF00486 Transcriptional regulatory protein, C terminal CPIN17261_RS02525 PF00512 His Kinase A (phospho-acceptor) domain CPIN17261_RS02525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN17261_RS02530 PF02541 Ppx/GppA phosphatase family CPIN17261_RS02540 PF08245 Mur ligase middle domain CPIN17261_RS02540 PF02875 Mur ligase family, glutamate ligase domain CPIN17261_RS02555 PF01820 D-ala D-ala ligase N-terminus CPIN17261_RS02555 PF07478 D-ala D-ala ligase C-terminus CPIN17261_RS02560 PF01330 RuvA N terminal domain CPIN17261_RS02560 PF07499 RuvA, C-terminal domain CPIN17261_RS02570 PF03023 Lipid II flippase MurJ CPIN17261_RS02575 PF09190 DALR domain CPIN17261_RS02575 PF01406 tRNA synthetases class I (C) catalytic domain CPIN17261_RS02580 PF00005 ABC transporter CPIN17261_RS02580 PF00664 ABC transporter transmembrane region CPIN17261_RS02585 PF01180 Dihydroorotate dehydrogenase CPIN17261_RS02595 PF00701 Dihydrodipicolinate synthetase family CPIN17261_RS02605 PF01066 CDP-alcohol phosphatidyltransferase CPIN17261_RS02620 PF17788 HypF Kae1-like domain CPIN17261_RS02620 PF01300 Telomere recombination CPIN17261_RS02620 PF00708 Acylphosphatase CPIN17261_RS02620 PF07503 HypF finger CPIN17261_RS02625 PF08753 NikR C terminal nickel binding domain CPIN17261_RS02625 PF01402 Ribbon-helix-helix protein, copG family CPIN17261_RS02640 PF02348 Cytidylyltransferase CPIN17261_RS02645 PF00291 Pyridoxal-phosphate dependent enzyme CPIN17261_RS02650 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CPIN17261_RS02655 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPIN17261_RS02660 PF02540 NAD synthase CPIN17261_RS02665 PF00753 Metallo-beta-lactamase superfamily CPIN17261_RS02730 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ CPIN17261_RS02740 PF01142 tRNA pseudouridine synthase D (TruD) CPIN17261_RS02745 PF02769 AIR synthase related protein, C-terminal domain CPIN17261_RS02745 PF00586 AIR synthase related protein, N-terminal domain CPIN17261_RS02750 PF01925 Sulfite exporter TauE/SafE CPIN17261_RS02760 PF00580 UvrD/REP helicase N-terminal domain CPIN17261_RS02760 PF13361 UvrD-like helicase C-terminal domain CPIN17261_RS02765 PF01509 TruB family pseudouridylate synthase (N terminal domain) CPIN17261_RS02770 PF02599 Global regulator protein family CPIN17261_RS02775 PF00288 GHMP kinases N terminal domain CPIN17261_RS02780 PF01668 SmpB protein CPIN17261_RS02790 PF00460 Flagella basal body rod protein CPIN17261_RS02795 PF00460 Flagella basal body rod protein CPIN17261_RS02795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN17261_RS02800 PF02049 Flagellar hook-basal body complex protein FliE CPIN17261_RS02805 PF00905 Penicillin binding protein transpeptidase domain CPIN17261_RS02805 PF03717 Penicillin-binding Protein dimerisation domain CPIN17261_RS02820 PF02151 UvrB/uvrC motif CPIN17261_RS02820 PF08459 UvrC Helix-hairpin-helix N-terminal CPIN17261_RS02820 PF01541 GIY-YIG catalytic domain CPIN17261_RS02830 PF03600 Citrate transporter CPIN17261_RS02835 PF02540 NAD synthase CPIN17261_RS02835 PF00958 GMP synthase C terminal domain CPIN17261_RS02835 PF00117 Glutamine amidotransferase class-I CPIN17261_RS02890 PF00145 C-5 cytosine-specific DNA methylase CPIN17261_RS02910 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CPIN17261_RS02925 PF00005 ABC transporter CPIN17261_RS02925 PF00571 CBS domain CPIN17261_RS02930 PF00528 Binding-protein-dependent transport system inner membrane component CPIN17261_RS02940 PF01467 Cytidylyltransferase-like CPIN17261_RS02945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPIN17261_RS02945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPIN17261_RS02950 PF00162 Phosphoglycerate kinase CPIN17261_RS02955 PF00121 Triosephosphate isomerase CPIN17261_RS02965 PF00209 Sodium:neurotransmitter symporter family CPIN17261_RS02970 PF01554 MatE CPIN17261_RS02980 PF18073 Rubredoxin metal binding domain CPIN17261_RS02985 PF00448 SRP54-type protein, GTPase domain CPIN17261_RS02990 PF08534 Redoxin CPIN17261_RS03000 PF12072 Domain of unknown function (DUF3552) CPIN17261_RS03000 PF01966 HD domain CPIN17261_RS03000 PF00013 KH domain CPIN17261_RS03020 PF00119 ATP synthase A chain CPIN17261_RS03025 PF00586 AIR synthase related protein, N-terminal domain CPIN17261_RS03025 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CPIN17261_RS03025 PF02769 AIR synthase related protein, C-terminal domain CPIN17261_RS03035 PF02142 MGS-like domain CPIN17261_RS03035 PF01808 AICARFT/IMPCHase bienzyme CPIN17261_RS03045 PF04851 Type III restriction enzyme, res subunit CPIN17261_RS03045 PF00271 Helicase conserved C-terminal domain CPIN17261_RS03050 PF05193 Peptidase M16 inactive domain CPIN17261_RS03050 PF00675 Insulinase (Peptidase family M16) CPIN17261_RS03055 PF04055 Radical SAM superfamily CPIN17261_RS03075 PF17941 Polyphosphate kinase C-terminal domain 1 CPIN17261_RS03075 PF02503 Polyphosphate kinase middle domain CPIN17261_RS03075 PF13090 Polyphosphate kinase C-terminal domain 2 CPIN17261_RS03075 PF13089 Polyphosphate kinase N-terminal domain CPIN17261_RS03080 PF00312 Ribosomal protein S15 CPIN17261_RS03095 PF01761 3-dehydroquinate synthase CPIN17261_RS03105 PF00919 Uncharacterized protein family UPF0004 CPIN17261_RS03105 PF04055 Radical SAM superfamily CPIN17261_RS03110 PF01434 Peptidase family M41 CPIN17261_RS03110 PF17862 AAA+ lid domain CPIN17261_RS03110 PF00004 ATPase family associated with various cellular activities (AAA) CPIN17261_RS03115 PF00994 Probable molybdopterin binding domain CPIN17261_RS03120 PF13361 UvrD-like helicase C-terminal domain CPIN17261_RS03120 PF00580 UvrD/REP helicase N-terminal domain CPIN17261_RS03125 PF00012 Hsp70 protein CPIN17261_RS03130 PF01025 GrpE CPIN17261_RS03145 PF04101 Glycosyltransferase family 28 C-terminal domain CPIN17261_RS03145 PF03033 Glycosyltransferase family 28 N-terminal domain CPIN17261_RS03150 PF01098 Cell cycle protein CPIN17261_RS03160 PF00581 Rhodanese-like domain CPIN17261_RS03160 PF00899 ThiF family CPIN17261_RS03165 PF00155 Aminotransferase class I and II CPIN17261_RS03170 PF17944 Arginine decarboxylase C-terminal helical extension CPIN17261_RS03170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPIN17261_RS03170 PF17810 Arginine decarboxylase helical bundle domain CPIN17261_RS03175 PF13393 Histidyl-tRNA synthetase CPIN17261_RS03175 PF03129 Anticodon binding domain CPIN17261_RS03180 PF02223 Thymidylate kinase CPIN17261_RS03185 PF01467 Cytidylyltransferase-like CPIN17261_RS03190 PF02441 Flavoprotein CPIN17261_RS03205 PF00994 Probable molybdopterin binding domain CPIN17261_RS03205 PF03453 MoeA N-terminal region (domain I and II) CPIN17261_RS03205 PF03454 MoeA C-terminal region (domain IV) CPIN17261_RS03210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPIN17261_RS03215 PF04305 Protein of unknown function (DUF455) CPIN17261_RS03225 PF01926 50S ribosome-binding GTPase CPIN17261_RS03225 PF10396 GTP-binding protein TrmE N-terminus CPIN17261_RS03225 PF12631 MnmE helical domain CPIN17261_RS03235 PF14849 YidC periplasmic domain CPIN17261_RS03235 PF02096 60Kd inner membrane protein CPIN17261_RS03240 PF01809 Putative membrane protein insertion efficiency factor CPIN17261_RS03245 PF00825 Ribonuclease P CPIN17261_RS03250 PF00468 Ribosomal protein L34 CPIN17261_RS03265 PF03061 Thioesterase superfamily CPIN17261_RS03280 PF02092 Glycyl-tRNA synthetase beta subunit CPIN17261_RS03290 PF00588 SpoU rRNA Methylase family CPIN17261_RS03295 PF01842 ACT domain CPIN17261_RS03295 PF00551 Formyl transferase CPIN17261_RS03300 PF00004 ATPase family associated with various cellular activities (AAA) CPIN17261_RS03300 PF05362 Lon protease (S16) C-terminal proteolytic domain CPIN17261_RS03300 PF02190 ATP-dependent protease La (LON) substrate-binding domain CPIN17261_RS03305 PF13525 Outer membrane lipoprotein CPIN17261_RS03310 PF02623 FliW protein CPIN17261_RS03335 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPIN17261_RS03340 PF01872 RibD C-terminal domain CPIN17261_RS03340 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPIN17261_RS03345 PF00474 Sodium:solute symporter family CPIN17261_RS03350 PF00528 Binding-protein-dependent transport system inner membrane component CPIN17261_RS03355 PF00005 ABC transporter CPIN17261_RS03360 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPIN17261_RS03365 PF08543 Phosphomethylpyrimidine kinase CPIN17261_RS03370 PF02581 Thiamine monophosphate synthase CPIN17261_RS03380 PF01230 HIT domain CPIN17261_RS03385 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CPIN17261_RS03385 PF01409 tRNA synthetases class II core domain (F) CPIN17261_RS03390 PF03483 B3/4 domain CPIN17261_RS03390 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CPIN17261_RS03390 PF03147 Ferredoxin-fold anticodon binding domain CPIN17261_RS03390 PF03484 tRNA synthetase B5 domain CPIN17261_RS03390 PF01588 Putative tRNA binding domain CPIN17261_RS03395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPIN17261_RS03400 PF02401 LytB protein CPIN17261_RS03405 PF00575 S1 RNA binding domain CPIN17261_RS03415 PF01842 ACT domain CPIN17261_RS03415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPIN17261_RS03415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPIN17261_RS03425 PF04551 GcpE protein CPIN17261_RS03430 PF00772 DnaB-like helicase N terminal domain CPIN17261_RS03430 PF03796 DnaB-like helicase C terminal domain CPIN17261_RS03440 PF03631 Virulence factor BrkB CPIN17261_RS03445 PF18644 Phage integrase SAM-like domain CPIN17261_RS03445 PF00589 Phage integrase family CPIN17261_RS03450 PF01177 Asp/Glu/Hydantoin racemase CPIN17261_RS03460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN17261_RS03460 PF00672 HAMP domain CPIN17261_RS03460 PF17200 Single Cache domain 2 CPIN17261_RS03470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN17261_RS03470 PF00512 His Kinase A (phospho-acceptor) domain CPIN17261_RS03475 PF00206 Lyase CPIN17261_RS03475 PF14698 Argininosuccinate lyase C-terminal CPIN17261_RS03485 PF02618 YceG-like family CPIN17261_RS03490 PF03971 Monomeric isocitrate dehydrogenase CPIN17261_RS03495 PF00056 lactate/malate dehydrogenase, NAD binding domain CPIN17261_RS03495 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPIN17261_RS03500 PF08442 ATP-grasp domain CPIN17261_RS03500 PF00549 CoA-ligase CPIN17261_RS03505 PF02629 CoA binding domain CPIN17261_RS03505 PF00549 CoA-ligase CPIN17261_RS03510 PF08264 Anticodon-binding domain of tRNA CPIN17261_RS03510 PF00133 tRNA synthetases class I (I, L, M and V) CPIN17261_RS03510 PF10458 Valyl tRNA synthetase tRNA binding arm CPIN17261_RS03515 PF09383 NIL domain CPIN17261_RS03515 PF00005 ABC transporter CPIN17261_RS03520 PF00528 Binding-protein-dependent transport system inner membrane component CPIN17261_RS03525 PF03180 NLPA lipoprotein CPIN17261_RS03530 PF01810 LysE type translocator CPIN17261_RS03540 PF03061 Thioesterase superfamily CPIN17261_RS03540 PF01008 Initiation factor 2 subunit family CPIN17261_RS03545 PF08003 Protein of unknown function (DUF1698) CPIN17261_RS03550 PF01841 Transglutaminase-like superfamily CPIN17261_RS03565 PF01546 Peptidase family M20/M25/M40 CPIN17261_RS03565 PF07687 Peptidase dimerisation domain CPIN17261_RS03570 PF02861 Clp amino terminal domain, pathogenicity island component CPIN17261_RS03570 PF10431 C-terminal, D2-small domain, of ClpB protein CPIN17261_RS03570 PF17871 AAA lid domain CPIN17261_RS03570 PF07724 AAA domain (Cdc48 subfamily) CPIN17261_RS03570 PF00004 ATPase family associated with various cellular activities (AAA) CPIN17261_RS03575 PF03572 Peptidase family S41 CPIN17261_RS03575 PF13180 PDZ domain CPIN17261_RS03580 PF01259 SAICAR synthetase CPIN17261_RS03585 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CPIN17261_RS03600 PF01553 Acyltransferase CPIN17261_RS03605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CPIN17261_RS03615 PF00403 Heavy-metal-associated domain CPIN17261_RS03630 PF00700 Bacterial flagellin C-terminal helical region CPIN17261_RS03630 PF00669 Bacterial flagellin N-terminal helical region CPIN17261_RS03635 PF03883 Peroxide stress protein YaaA CPIN17261_RS03640 PF00216 Bacterial DNA-binding protein CPIN17261_RS03655 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPIN17261_RS03655 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPIN17261_RS03660 PF00072 Response regulator receiver domain CPIN17261_RS03660 PF00158 Sigma-54 interaction domain CPIN17261_RS03675 PF00521 DNA gyrase/topoisomerase IV, subunit A CPIN17261_RS03675 PF03989 DNA gyrase C-terminal domain, beta-propeller CPIN17261_RS03685 PF00871 Acetokinase family CPIN17261_RS03690 PF01515 Phosphate acetyl/butaryl transferase CPIN17261_RS03695 PF02107 Flagellar L-ring protein CPIN17261_RS03700 PF01556 DnaJ C terminal domain CPIN17261_RS03700 PF00226 DnaJ domain CPIN17261_RS03705 PF13411 MerR HTH family regulatory protein CPIN17261_RS03710 PF00999 Sodium/hydrogen exchanger family CPIN17261_RS03710 PF02254 TrkA-N domain CPIN17261_RS03715 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPIN17261_RS03715 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPIN17261_RS03715 PF02811 PHP domain CPIN17261_RS03715 PF14579 Helix-hairpin-helix motif CPIN17261_RS03720 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CPIN17261_RS03725 PF01965 DJ-1/PfpI family CPIN17261_RS03735 PF00710 Asparaginase, N-terminal CPIN17261_RS03735 PF17763 Glutaminase/Asparaginase C-terminal domain CPIN17261_RS03745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CPIN17261_RS03745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPIN17261_RS03745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CPIN17261_RS03750 PF03974 Ecotin CPIN17261_RS03755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CPIN17261_RS03755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CPIN17261_RS03755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CPIN17261_RS03760 PF01943 Polysaccharide biosynthesis protein CPIN17261_RS03760 PF14667 Polysaccharide biosynthesis C-terminal domain CPIN17261_RS03770 PF00534 Glycosyl transferases group 1 CPIN17261_RS03770 PF13439 Glycosyltransferase Family 4 CPIN17261_RS03775 PF00535 Glycosyl transferase family 2 CPIN17261_RS03780 PF13439 Glycosyltransferase Family 4 CPIN17261_RS03780 PF00534 Glycosyl transferases group 1 CPIN17261_RS03785 PF18527 STT3/PglB C-terminal beta-barrel domain CPIN17261_RS03785 PF02516 Oligosaccharyl transferase STT3 subunit CPIN17261_RS03790 PF00534 Glycosyl transferases group 1 CPIN17261_RS03790 PF13477 Glycosyl transferase 4-like CPIN17261_RS03795 PF02397 Bacterial sugar transferase CPIN17261_RS03810 PF17827 PrmC N-terminal domain CPIN17261_RS03810 PF05175 Methyltransferase small domain CPIN17261_RS03820 PF00209 Sodium:neurotransmitter symporter family CPIN17261_RS03840 PF00180 Isocitrate/isopropylmalate dehydrogenase CPIN17261_RS03845 PF13580 SIS domain CPIN17261_RS03850 PF00294 pfkB family carbohydrate kinase CPIN17261_RS03850 PF01467 Cytidylyltransferase-like CPIN17261_RS03855 PF01370 NAD dependent epimerase/dehydratase family CPIN17261_RS03870 PF01177 Asp/Glu/Hydantoin racemase CPIN17261_RS03875 PF01709 Transcriptional regulator CPIN17261_RS03880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPIN17261_RS03885 PF00375 Sodium:dicarboxylate symporter family CPIN17261_RS03890 PF00881 Nitroreductase family CPIN17261_RS03895 PF01546 Peptidase family M20/M25/M40 CPIN17261_RS03895 PF07687 Peptidase dimerisation domain CPIN17261_RS03900 PF07687 Peptidase dimerisation domain CPIN17261_RS03900 PF01546 Peptidase family M20/M25/M40 CPIN17261_RS03905 PF03575 Peptidase family S51 CPIN17261_RS03910 PF03606 C4-dicarboxylate anaerobic carrier CPIN17261_RS03915 PF07687 Peptidase dimerisation domain CPIN17261_RS03915 PF01546 Peptidase family M20/M25/M40 CPIN17261_RS03920 PF07690 Major Facilitator Superfamily CPIN17261_RS03925 PF00209 Sodium:neurotransmitter symporter family CPIN17261_RS03935 PF13180 PDZ domain CPIN17261_RS03935 PF17820 PDZ domain CPIN17261_RS03940 PF02934 GatB/GatE catalytic domain CPIN17261_RS03940 PF02637 GatB domain CPIN17261_RS03945 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CPIN17261_RS03945 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CPIN17261_RS03950 PF00933 Glycosyl hydrolase family 3 N terminal domain CPIN17261_RS03955 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPIN17261_RS03970 PF00482 Type II secretion system (T2SS), protein F CPIN17261_RS03975 PF00437 Type II/IV secretion system protein CPIN17261_RS03995 PF00263 Bacterial type II and III secretion system protein CPIN17261_RS03995 PF03958 Bacterial type II/III secretion system short domain CPIN17261_RS04015 PF01926 50S ribosome-binding GTPase CPIN17261_RS04015 PF07650 KH domain CPIN17261_RS04020 PF07724 AAA domain (Cdc48 subfamily) CPIN17261_RS04020 PF10431 C-terminal, D2-small domain, of ClpB protein CPIN17261_RS04025 PF00227 Proteasome subunit CPIN17261_RS04030 PF01281 Ribosomal protein L9, N-terminal domain CPIN17261_RS04030 PF03948 Ribosomal protein L9, C-terminal domain CPIN17261_RS04035 PF00764 Arginosuccinate synthase CPIN17261_RS04055 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CPIN17261_RS04055 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPIN17261_RS04065 PF01479 S4 domain CPIN17261_RS04070 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CPIN17261_RS04075 PF12399 Branched-chain amino acid ATP-binding cassette transporter CPIN17261_RS04075 PF00005 ABC transporter CPIN17261_RS04080 PF00309 Sigma-54 factor, Activator interacting domain (AID) CPIN17261_RS04080 PF04963 Sigma-54 factor, core binding domain CPIN17261_RS04080 PF04552 Sigma-54, DNA binding domain CPIN17261_RS04090 PF00183 Hsp90 protein CPIN17261_RS04095 PF00082 Subtilase family CPIN17261_RS04095 PF12951 Passenger-associated-transport-repeat CPIN17261_RS04095 PF03797 Autotransporter beta-domain CPIN17261_RS04110 PF02492 CobW/HypB/UreG, nucleotide-binding domain CPIN17261_RS04115 PF01455 HupF/HypC family CPIN17261_RS04120 PF01924 Hydrogenase formation hypA family CPIN17261_RS04125 PF00586 AIR synthase related protein, N-terminal domain CPIN17261_RS04125 PF02769 AIR synthase related protein, C-terminal domain CPIN17261_RS04130 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CPIN17261_RS04140 PF01070 FMN-dependent dehydrogenase CPIN17261_RS04150 PF00875 DNA photolyase CPIN17261_RS04150 PF03441 FAD binding domain of DNA photolyase CPIN17261_RS04155 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CPIN17261_RS04155 PF00132 Bacterial transferase hexapeptide (six repeats) CPIN17261_RS04160 PF10369 Small subunit of acetolactate synthase CPIN17261_RS04165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPIN17261_RS04165 PF00205 Thiamine pyrophosphate enzyme, central domain CPIN17261_RS04165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPIN17261_RS04175 PF09397 Ftsk gamma domain CPIN17261_RS04175 PF17854 FtsK alpha domain CPIN17261_RS04175 PF01580 FtsK/SpoIIIE family CPIN17261_RS04185 PF01063 Amino-transferase class IV CPIN17261_RS04195 PF00166 Chaperonin 10 Kd subunit CPIN17261_RS04200 PF00118 TCP-1/cpn60 chaperonin family CPIN17261_RS04205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPIN17261_RS04205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPIN17261_RS04205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPIN17261_RS04205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPIN17261_RS04230 PF01594 AI-2E family transporter CPIN17261_RS04250 PF08245 Mur ligase middle domain CPIN17261_RS04250 PF02875 Mur ligase family, glutamate ligase domain CPIN17261_RS04255 PF02261 Aspartate decarboxylase CPIN17261_RS04260 PF00677 Lumazine binding domain CPIN17261_RS04265 PF02578 Multi-copper polyphenol oxidoreductase laccase CPIN17261_RS04280 PF00472 RF-1 domain CPIN17261_RS04280 PF03462 PCRF domain CPIN17261_RS04285 PF01649 Ribosomal protein S20 CPIN17261_RS04295 PF13356 Arm DNA-binding domain CPIN17261_RS04295 PF00589 Phage integrase family CPIN17261_RS04315 PF01381 Helix-turn-helix CPIN17261_RS04315 PF00145 C-5 cytosine-specific DNA methylase CPIN17261_RS04330 PF01555 DNA methylase CPIN17261_RS04335 PF00436 Single-strand binding protein family CPIN17261_RS04425 PF05973 Phage derived protein Gp49-like (DUF891) CPIN17261_RS04430 PF01381 Helix-turn-helix CPIN17261_RS04555 PF09019 EcoRII C terminal CPIN17261_RS04560 PF00145 C-5 cytosine-specific DNA methylase CPIN17261_RS04610 PF02652 L-lactate permease CPIN17261_RS04620 PF00795 Carbon-nitrogen hydrolase CPIN17261_RS04625 PF01545 Cation efflux family CPIN17261_RS04625 PF16916 Dimerisation domain of Zinc Transporter CPIN17261_RS04630 PF04371 Porphyromonas-type peptidyl-arginine deiminase CPIN17261_RS04640 PF00528 Binding-protein-dependent transport system inner membrane component CPIN17261_RS04645 PF00528 Binding-protein-dependent transport system inner membrane component CPIN17261_RS04650 PF00005 ABC transporter CPIN17261_RS04655 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPIN17261_RS04660 PF12327 FtsZ family, C-terminal domain CPIN17261_RS04660 PF00091 Tubulin/FtsZ family, GTPase domain CPIN17261_RS04665 PF02491 SHS2 domain inserted in FTSA CPIN17261_RS04680 PF01795 MraW methylase family CPIN17261_RS04690 PF14306 PUA-like domain CPIN17261_RS04690 PF01747 ATP-sulfurylase CPIN17261_RS04695 PF00072 Response regulator receiver domain CPIN17261_RS04695 PF00486 Transcriptional regulatory protein, C terminal CPIN17261_RS04700 PF02542 YgbB family CPIN17261_RS04700 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPIN17261_RS04705 PF01964 Radical SAM ThiC family CPIN17261_RS04710 PF10609 NUBPL iron-transfer P-loop NTPase CPIN17261_RS04710 PF01883 Iron-sulfur cluster assembly protein CPIN17261_RS04760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPIN17261_RS04770 PF02391 MoaE protein CPIN17261_RS04775 PF00994 Probable molybdopterin binding domain CPIN17261_RS04775 PF03453 MoeA N-terminal region (domain I and II) CPIN17261_RS04775 PF03454 MoeA C-terminal region (domain IV) CPIN17261_RS04780 PF02661 Fic/DOC family CPIN17261_RS04780 PF13784 Fic/DOC family N-terminal CPIN17261_RS04785 PF12170 DNA polymerase III tau subunit V interacting with alpha CPIN17261_RS04785 PF12169 DNA polymerase III subunits gamma and tau domain III CPIN17261_RS04795 PF02666 Phosphatidylserine decarboxylase CPIN17261_RS04800 PF00149 Calcineurin-like phosphoesterase CPIN17261_RS04810 PF09084 NMT1/THI5 like CPIN17261_RS04815 PF00005 ABC transporter CPIN17261_RS04820 PF00593 TonB dependent receptor CPIN17261_RS04820 PF04886 PT repeat CPIN17261_RS04820 PF07715 TonB-dependent Receptor Plug Domain CPIN17261_RS04830 PF01293 Phosphoenolpyruvate carboxykinase CPIN17261_RS04835 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CPIN17261_RS04840 PF00364 Biotin-requiring enzyme CPIN17261_RS04840 PF00682 HMGL-like CPIN17261_RS04840 PF02436 Conserved carboxylase domain CPIN17261_RS04850 PF00209 Sodium:neurotransmitter symporter family CPIN17261_RS04855 PF00209 Sodium:neurotransmitter symporter family CPIN17261_RS04860 PF00209 Sodium:neurotransmitter symporter family CPIN17261_RS04865 PF01070 FMN-dependent dehydrogenase CPIN17261_RS04875 PF01966 HD domain CPIN17261_RS04875 PF13286 Phosphohydrolase-associated domain CPIN17261_RS05050 PF01381 Helix-turn-helix CPIN17261_RS05050 PF00145 C-5 cytosine-specific DNA methylase CPIN17261_RS05145 PF00436 Single-strand binding protein family CPIN17261_RS05200 PF00589 Phage integrase family CPIN17261_RS05200 PF13356 Arm DNA-binding domain CPIN17261_RS05215 PF02589 LUD domain CPIN17261_RS05220 PF02589 LUD domain CPIN17261_RS05220 PF13183 4Fe-4S dicluster domain CPIN17261_RS05220 PF11870 Domain of unknown function (DUF3390) CPIN17261_RS05225 PF02754 Cysteine-rich domain CPIN17261_RS05230 PF02652 L-lactate permease CPIN17261_RS05235 PF00892 EamA-like transporter family CPIN17261_RS05240 PF00873 AcrB/AcrD/AcrF family CPIN17261_RS05255 PF00813 FliP family CPIN17261_RS05260 PF13677 Membrane MotB of proton-channel complex MotA/MotB CPIN17261_RS05260 PF00691 OmpA family CPIN17261_RS05265 PF01618 MotA/TolQ/ExbB proton channel family CPIN17261_RS05270 PF00132 Bacterial transferase hexapeptide (six repeats) CPIN17261_RS05270 PF12804 MobA-like NTP transferase domain CPIN17261_RS05275 PF04127 DNA / pantothenate metabolism flavoprotein CPIN17261_RS05275 PF02441 Flavoprotein CPIN17261_RS05285 PF01255 Putative undecaprenyl diphosphate synthase CPIN17261_RS05290 PF01478 Type IV leader peptidase family CPIN17261_RS05290 PF06750 Bacterial Peptidase A24 N-terminal domain CPIN17261_RS05300 PF01416 tRNA pseudouridine synthase CPIN17261_RS05305 PF00375 Sodium:dicarboxylate symporter family CPIN17261_RS05320 PF00593 TonB dependent receptor CPIN17261_RS05320 PF04886 PT repeat CPIN17261_RS05320 PF07715 TonB-dependent Receptor Plug Domain CPIN17261_RS05325 PF00072 Response regulator receiver domain CPIN17261_RS05325 PF00486 Transcriptional regulatory protein, C terminal CPIN17261_RS05345 PF00890 FAD binding domain CPIN17261_RS05345 PF04205 FMN-binding domain CPIN17261_RS05350 PF00221 Aromatic amino acid lyase CPIN17261_RS05355 PF02772 S-adenosylmethionine synthetase, central domain CPIN17261_RS05355 PF00438 S-adenosylmethionine synthetase, N-terminal domain CPIN17261_RS05355 PF02773 S-adenosylmethionine synthetase, C-terminal domain CPIN17261_RS05365 PF00771 FHIPEP family CPIN17261_RS05385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPIN17261_RS05385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPIN17261_RS05390 PF01979 Amidohydrolase family CPIN17261_RS05395 PF01370 NAD dependent epimerase/dehydratase family CPIN17261_RS05400 PF02581 Thiamine monophosphate synthase CPIN17261_RS05405 PF04055 Radical SAM superfamily CPIN17261_RS05405 PF06968 Biotin and Thiamin Synthesis associated domain CPIN17261_RS05410 PF05690 Thiazole biosynthesis protein ThiG CPIN17261_RS05415 PF00899 ThiF family CPIN17261_RS05425 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CPIN17261_RS05425 PF14602 Hexapeptide repeat of succinyl-transferase CPIN17261_RS05440 PF02561 Flagellar protein FliS CPIN17261_RS05445 PF02465 Flagellar hook-associated protein 2 N-terminus CPIN17261_RS05445 PF07196 Flagellin hook IN motif CPIN17261_RS05445 PF07195 Flagellar hook-associated protein 2 C-terminus CPIN17261_RS05475 PF02119 Flagellar P-ring protein CPIN17261_RS05495 PF07196 Flagellin hook IN motif CPIN17261_RS05495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPIN17261_RS05510 PF02678 Pirin CPIN17261_RS05510 PF05726 Pirin C-terminal cupin domain CPIN17261_RS05515 PF00224 Pyruvate kinase, barrel domain CPIN17261_RS05515 PF00391 PEP-utilising enzyme, mobile domain CPIN17261_RS05515 PF02887 Pyruvate kinase, alpha/beta domain CPIN17261_RS05525 PF02384 N-6 DNA Methylase CPIN17261_RS05535 PF00384 Molybdopterin oxidoreductase CPIN17261_RS05535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN17261_RS05535 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPIN17261_RS05535 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS05535 PF12838 4Fe-4S dicluster domain CPIN17261_RS05540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN17261_RS05540 PF00384 Molybdopterin oxidoreductase CPIN17261_RS05540 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS05545 PF13247 4Fe-4S dicluster domain CPIN17261_RS05555 PF02634 FdhD/NarQ family CPIN17261_RS05560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPIN17261_RS05560 PF03459 TOBE domain CPIN17261_RS05570 PF01702 Queuine tRNA-ribosyltransferase CPIN17261_RS05575 PF00472 RF-1 domain CPIN17261_RS05575 PF03462 PCRF domain CPIN17261_RS05580 PF02569 Pantoate-beta-alanine ligase CPIN17261_RS05585 PF04055 Radical SAM superfamily CPIN17261_RS05585 PF00919 Uncharacterized protein family UPF0004 CPIN17261_RS05590 PF01171 PP-loop family CPIN17261_RS05595 PF04452 RNA methyltransferase CPIN17261_RS05620 PF04055 Radical SAM superfamily CPIN17261_RS05620 PF06463 Molybdenum Cofactor Synthesis C CPIN17261_RS05625 PF00669 Bacterial flagellin N-terminal helical region CPIN17261_RS05645 PF01116 Fructose-bisphosphate aldolase class-II CPIN17261_RS05655 PF10576 Iron-sulfur binding domain of endonuclease III CPIN17261_RS05655 PF00633 Helix-hairpin-helix motif CPIN17261_RS05655 PF00730 HhH-GPD superfamily base excision DNA repair protein CPIN17261_RS05670 PF02028 BCCT, betaine/carnitine/choline family transporter CPIN17261_RS05675 PF00072 Response regulator receiver domain CPIN17261_RS05675 PF00486 Transcriptional regulatory protein, C terminal CPIN17261_RS05690 PF12344 Ultra-violet resistance protein B CPIN17261_RS05690 PF02151 UvrB/uvrC motif CPIN17261_RS05690 PF00271 Helicase conserved C-terminal domain CPIN17261_RS05690 PF17757 UvrB interaction domain CPIN17261_RS05690 PF04851 Type III restriction enzyme, res subunit CPIN17261_RS05705 PF00114 Pilin (bacterial filament) CPIN17261_RS05705 PF07963 Prokaryotic N-terminal methylation motif CPIN17261_RS05710 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CPIN17261_RS05710 PF18074 Primosomal protein N C-terminal domain CPIN17261_RS05710 PF17764 3′ DNA-binding domain (3′BD) CPIN17261_RS05710 PF00271 Helicase conserved C-terminal domain CPIN17261_RS05710 PF00270 DEAD/DEAH box helicase CPIN17261_RS05715 PF01339 CheB methylesterase CPIN17261_RS05715 PF00072 Response regulator receiver domain CPIN17261_RS05720 PF01739 CheR methyltransferase, SAM binding domain CPIN17261_RS05730 PF01578 Cytochrome C assembly protein CPIN17261_RS05730 PF05140 ResB-like family CPIN17261_RS05735 PF13649 Methyltransferase domain CPIN17261_RS05740 PF01687 Riboflavin kinase CPIN17261_RS05740 PF06574 FAD synthetase CPIN17261_RS05750 PF12826 Helix-hairpin-helix motif CPIN17261_RS05750 PF00533 BRCA1 C Terminus (BRCT) domain CPIN17261_RS05750 PF01653 NAD-dependent DNA ligase adenylation domain CPIN17261_RS05750 PF03120 NAD-dependent DNA ligase OB-fold domain CPIN17261_RS05755 PF00809 Pterin binding enzyme CPIN17261_RS05770 PF13840 ACT domain CPIN17261_RS05770 PF01842 ACT domain CPIN17261_RS05770 PF00696 Amino acid kinase family CPIN17261_RS05775 PF00293 NUDIX domain CPIN17261_RS05780 PF06969 HemN C-terminal domain CPIN17261_RS05780 PF04055 Radical SAM superfamily CPIN17261_RS05785 PF02416 mttA/Hcf106 family CPIN17261_RS05790 PF00902 Sec-independent protein translocase protein (TatC) CPIN17261_RS05795 PF02547 Queuosine biosynthesis protein CPIN17261_RS05805 PF00206 Lyase CPIN17261_RS05805 PF10415 Fumarase C C-terminus CPIN17261_RS05810 PF03605 Anaerobic c4-dicarboxylate membrane transporter CPIN17261_RS05820 PF01343 Peptidase family S49 CPIN17261_RS05825 PF01979 Amidohydrolase family CPIN17261_RS05830 PF01220 Dehydroquinase class II CPIN17261_RS05835 PF01321 Creatinase/Prolidase N-terminal domain CPIN17261_RS05835 PF00557 Metallopeptidase family M24 CPIN17261_RS05840 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CPIN17261_RS05845 PF00448 SRP54-type protein, GTPase domain CPIN17261_RS05850 PF10609 NUBPL iron-transfer P-loop NTPase CPIN17261_RS05860 PF04539 Sigma-70 region 3 CPIN17261_RS05860 PF04545 Sigma-70, region 4 CPIN17261_RS05860 PF04542 Sigma-70 region 2 CPIN17261_RS05865 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPIN17261_RS05865 PF02154 Flagellar motor switch protein FliM CPIN17261_RS05870 PF04509 CheC-like family CPIN17261_RS05870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPIN17261_RS05875 PF03641 Possible lysine decarboxylase CPIN17261_RS05885 PF00474 Sodium:solute symporter family CPIN17261_RS05895 PF00593 TonB dependent receptor CPIN17261_RS05895 PF07715 TonB-dependent Receptor Plug Domain CPIN17261_RS05900 PF01618 MotA/TolQ/ExbB proton channel family CPIN17261_RS05905 PF02472 Biopolymer transport protein ExbD/TolR CPIN17261_RS05910 PF03544 Gram-negative bacterial TonB protein C-terminal CPIN17261_RS05915 PF01883 Iron-sulfur cluster assembly protein CPIN17261_RS05940 PF01384 Phosphate transporter family CPIN17261_RS05945 PF00581 Rhodanese-like domain CPIN17261_RS05955 PF00218 Indole-3-glycerol phosphate synthase CPIN17261_RS05965 PF03692 Putative zinc- or iron-chelating domain CPIN17261_RS05970 PF08468 Methyltransferase small domain N-terminal CPIN17261_RS05970 PF05175 Methyltransferase small domain CPIN17261_RS05980 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPIN17261_RS05985 PF01474 Class-II DAHP synthetase family CPIN17261_RS05990 PF00892 EamA-like transporter family CPIN17261_RS06000 PF17820 PDZ domain CPIN17261_RS06000 PF02163 Peptidase family M50 CPIN17261_RS06005 PF01168 Alanine racemase, N-terminal domain CPIN17261_RS06010 PF01323 DSBA-like thioredoxin domain CPIN17261_RS06015 PF03459 TOBE domain CPIN17261_RS06015 PF00005 ABC transporter CPIN17261_RS06030 PF03459 TOBE domain CPIN17261_RS06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPIN17261_RS06040 PF04028 Domain of unknown function (DUF374) CPIN17261_RS06045 PF04055 Radical SAM superfamily CPIN17261_RS06045 PF00919 Uncharacterized protein family UPF0004 CPIN17261_RS06045 PF01938 TRAM domain CPIN17261_RS06055 PF13184 NusA-like KH domain CPIN17261_RS06055 PF08529 NusA N-terminal domain CPIN17261_RS06065 PF03807 NADP oxidoreductase coenzyme F420-dependent CPIN17261_RS06065 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPIN17261_RS06070 PF00171 Aldehyde dehydrogenase family CPIN17261_RS06075 PF00696 Amino acid kinase family CPIN17261_RS06075 PF01472 PUA domain CPIN17261_RS06080 PF03372 Endonuclease/Exonuclease/phosphatase family CPIN17261_RS06095 PF01207 Dihydrouridine synthase (Dus) CPIN17261_RS06110 PF02590 Predicted SPOUT methyltransferase CPIN17261_RS06115 PF17848 Acetyl-coA carboxylase zinc finger domain CPIN17261_RS06115 PF01039 Carboxyl transferase domain CPIN17261_RS06120 PF00459 Inositol monophosphatase family CPIN17261_RS06125 PF00285 Citrate synthase, C-terminal domain CPIN17261_RS06130 PF02254 TrkA-N domain CPIN17261_RS06130 PF00999 Sodium/hydrogen exchanger family CPIN17261_RS06130 PF02080 TrkA-C domain CPIN17261_RS06135 PF01171 PP-loop family CPIN17261_RS06140 PF01048 Phosphorylase superfamily CPIN17261_RS06145 PF00698 Acyl transferase domain CPIN17261_RS06150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPIN17261_RS06160 PF00691 OmpA family CPIN17261_RS06175 PF02472 Biopolymer transport protein ExbD/TolR CPIN17261_RS06180 PF01618 MotA/TolQ/ExbB proton channel family CPIN17261_RS06185 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CPIN17261_RS06190 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPIN17261_RS06190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPIN17261_RS06195 PF00231 ATP synthase CPIN17261_RS06200 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPIN17261_RS06200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPIN17261_RS06200 PF00306 ATP synthase alpha/beta chain, C terminal domain CPIN17261_RS06205 PF00213 ATP synthase delta (OSCP) subunit CPIN17261_RS06210 PF00430 ATP synthase B/B' CF(0) CPIN17261_RS06220 PF17762 HTH domain found in ParB protein CPIN17261_RS06220 PF02195 ParB-like nuclease domain CPIN17261_RS06225 PF13614 AAA domain CPIN17261_RS06230 PF02237 Biotin protein ligase C terminal domain CPIN17261_RS06230 PF03099 Biotin/lipoate A/B protein ligase family CPIN17261_RS06230 PF08279 HTH domain CPIN17261_RS06235 PF02911 Formyl transferase, C-terminal domain CPIN17261_RS06235 PF00551 Formyl transferase CPIN17261_RS06245 PF00137 ATP synthase subunit C CPIN17261_RS06255 PF01979 Amidohydrolase family CPIN17261_RS06265 PF00857 Isochorismatase family CPIN17261_RS06270 PF08502 LeuA allosteric (dimerisation) domain CPIN17261_RS06270 PF00682 HMGL-like CPIN17261_RS06275 PF01066 CDP-alcohol phosphatidyltransferase CPIN17261_RS06280 PF00004 ATPase family associated with various cellular activities (AAA) CPIN17261_RS06280 PF01434 Peptidase family M41 CPIN17261_RS06280 PF17862 AAA+ lid domain CPIN17261_RS06290 PF00072 Response regulator receiver domain CPIN17261_RS06300 PF02719 Polysaccharide biosynthesis protein CPIN17261_RS06305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CPIN17261_RS06315 PF01138 3' exoribonuclease family, domain 1 CPIN17261_RS06315 PF03725 3' exoribonuclease family, domain 2 CPIN17261_RS06315 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CPIN17261_RS06315 PF00575 S1 RNA binding domain CPIN17261_RS06315 PF00013 KH domain CPIN17261_RS06335 PF02843 Phosphoribosylglycinamide synthetase, C domain CPIN17261_RS06335 PF02844 Phosphoribosylglycinamide synthetase, N domain CPIN17261_RS06335 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPIN17261_RS06350 PF01145 SPFH domain / Band 7 family CPIN17261_RS06350 PF16200 C-terminal region of band_7 CPIN17261_RS06370 PF01741 Large-conductance mechanosensitive channel, MscL CPIN17261_RS06375 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPIN17261_RS06380 PF02325 YGGT family CPIN17261_RS06400 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CPIN17261_RS06410 PF01588 Putative tRNA binding domain CPIN17261_RS06410 PF00133 tRNA synthetases class I (I, L, M and V) CPIN17261_RS06410 PF09334 tRNA synthetases class I (M) CPIN17261_RS06440 PF03707 Bacterial signalling protein N terminal repeat CPIN17261_RS06440 PF00563 EAL domain CPIN17261_RS06440 PF00990 Diguanylate cyclase, GGDEF domain CPIN17261_RS06450 PF00360 Phytochrome region CPIN17261_RS06450 PF00990 Diguanylate cyclase, GGDEF domain CPIN17261_RS06450 PF00563 EAL domain CPIN17261_RS06450 PF01590 GAF domain CPIN17261_RS06455 PF01513 ATP-NAD kinase CPIN17261_RS06460 PF13476 AAA domain CPIN17261_RS06465 PF00990 Diguanylate cyclase, GGDEF domain CPIN17261_RS06465 PF00072 Response regulator receiver domain CPIN17261_RS06470 PF01026 TatD related DNase CPIN17261_RS06480 PF03330 Lytic transglycolase CPIN17261_RS06480 PF05036 Sporulation related domain CPIN17261_RS06500 PF01926 50S ribosome-binding GTPase CPIN17261_RS06510 PF03717 Penicillin-binding Protein dimerisation domain CPIN17261_RS06510 PF00905 Penicillin binding protein transpeptidase domain CPIN17261_RS06515 PF01208 Uroporphyrinogen decarboxylase (URO-D) CPIN17261_RS06520 PF00672 HAMP domain CPIN17261_RS06520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN17261_RS06525 PF00342 Phosphoglucose isomerase CPIN17261_RS06530 PF00483 Nucleotidyl transferase CPIN17261_RS06535 PF00005 ABC transporter CPIN17261_RS06540 PF00528 Binding-protein-dependent transport system inner membrane component CPIN17261_RS06545 PF12849 PBP superfamily domain CPIN17261_RS06550 PF01205 Uncharacterized protein family UPF0029 CPIN17261_RS06550 PF09186 Domain of unknown function (DUF1949) CPIN17261_RS06765 PF13401 AAA domain CPIN17261_RS06765 PF09077 Mu B transposition protein, C terminal CPIN17261_RS06785 PF01790 Prolipoprotein diacylglyceryl transferase CPIN17261_RS06790 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CPIN17261_RS06795 PF02910 Fumarate reductase flavoprotein C-term CPIN17261_RS06795 PF00890 FAD binding domain CPIN17261_RS06800 PF13085 2Fe-2S iron-sulfur cluster binding domain CPIN17261_RS06800 PF13183 4Fe-4S dicluster domain CPIN17261_RS06810 PF01312 FlhB HrpN YscU SpaS Family CPIN17261_RS06835 PF00202 Aminotransferase class-III CPIN17261_RS06845 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CPIN17261_RS06845 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CPIN17261_RS06850 PF10502 Signal peptidase, peptidase S26 CPIN17261_RS06855 PF02163 Peptidase family M50 CPIN17261_RS06860 PF02502 Ribose/Galactose Isomerase CPIN17261_RS06870 PF00156 Phosphoribosyl transferase domain CPIN17261_RS06875 PF09335 SNARE associated Golgi protein CPIN17261_RS06880 PF00883 Cytosol aminopeptidase family, catalytic domain CPIN17261_RS06885 PF01926 50S ribosome-binding GTPase CPIN17261_RS06885 PF06071 Protein of unknown function (DUF933) CPIN17261_RS06900 PF00005 ABC transporter CPIN17261_RS06905 PF02405 Permease MlaE CPIN17261_RS06910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPIN17261_RS06910 PF02785 Biotin carboxylase C-terminal domain CPIN17261_RS06910 PF00289 Biotin carboxylase, N-terminal domain CPIN17261_RS06915 PF09107 Elongation factor SelB, winged helix CPIN17261_RS06915 PF09106 Elongation factor SelB, winged helix CPIN17261_RS06915 PF03144 Elongation factor Tu domain 2 CPIN17261_RS06915 PF09105 Elongation factor SelB, winged helix CPIN17261_RS06915 PF00009 Elongation factor Tu GTP binding domain CPIN17261_RS06920 PF03841 L-seryl-tRNA selenium transferase CPIN17261_RS06925 PF01268 Formate--tetrahydrofolate ligase CPIN17261_RS06930 PF02576 RimP N-terminal domain CPIN17261_RS06930 PF17384 RimP C-terminal SH3 domain CPIN17261_RS06935 PF02033 Ribosome-binding factor A CPIN17261_RS06940 PF00009 Elongation factor Tu GTP binding domain CPIN17261_RS06940 PF11987 Translation-initiation factor 2 CPIN17261_RS06940 PF04760 Translation initiation factor IF-2, N-terminal region CPIN17261_RS06950 PF00288 GHMP kinases N terminal domain CPIN17261_RS06950 PF08544 GHMP kinases C terminal CPIN17261_RS06960 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CPIN17261_RS06975 PF01103 Surface antigen CPIN17261_RS06975 PF07244 Surface antigen variable number repeat CPIN17261_RS06980 PF00403 Heavy-metal-associated domain CPIN17261_RS07050 PF03458 UPF0126 domain CPIN17261_RS07055 PF00578 AhpC/TSA family CPIN17261_RS07055 PF10417 C-terminal domain of 1-Cys peroxiredoxin CPIN17261_RS07075 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CPIN17261_RS07075 PF04509 CheC-like family CPIN17261_RS07100 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CPIN17261_RS07110 PF00535 Glycosyl transferase family 2 CPIN17261_RS07115 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CPIN17261_RS07120 PF01522 Polysaccharide deacetylase CPIN17261_RS07130 PF00534 Glycosyl transferases group 1 CPIN17261_RS07130 PF13439 Glycosyltransferase Family 4 CPIN17261_RS07135 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CPIN17261_RS07140 PF00534 Glycosyl transferases group 1 CPIN17261_RS07140 PF13439 Glycosyltransferase Family 4 CPIN17261_RS07145 PF00534 Glycosyl transferases group 1 CPIN17261_RS07145 PF13439 Glycosyltransferase Family 4 CPIN17261_RS07165 PF00528 Binding-protein-dependent transport system inner membrane component CPIN17261_RS07170 PF04983 RNA polymerase Rpb1, domain 3 CPIN17261_RS07170 PF04997 RNA polymerase Rpb1, domain 1 CPIN17261_RS07170 PF05000 RNA polymerase Rpb1, domain 4 CPIN17261_RS07170 PF04998 RNA polymerase Rpb1, domain 5 CPIN17261_RS07170 PF00623 RNA polymerase Rpb1, domain 2 CPIN17261_RS07175 PF04565 RNA polymerase Rpb2, domain 3 CPIN17261_RS07175 PF10385 RNA polymerase beta subunit external 1 domain CPIN17261_RS07175 PF00562 RNA polymerase Rpb2, domain 6 CPIN17261_RS07175 PF04561 RNA polymerase Rpb2, domain 2 CPIN17261_RS07175 PF04563 RNA polymerase beta subunit CPIN17261_RS07175 PF04560 RNA polymerase Rpb2, domain 7 CPIN17261_RS07180 PF00542 Ribosomal protein L7/L12 C-terminal domain CPIN17261_RS07180 PF16320 Ribosomal protein L7/L12 dimerisation domain CPIN17261_RS07185 PF00466 Ribosomal protein L10 CPIN17261_RS07190 PF00687 Ribosomal protein L1p/L10e family CPIN17261_RS07195 PF03946 Ribosomal protein L11, N-terminal domain CPIN17261_RS07195 PF00298 Ribosomal protein L11, RNA binding domain CPIN17261_RS07200 PF02357 Transcription termination factor nusG CPIN17261_RS07215 PF00471 Ribosomal protein L33 CPIN17261_RS07220 PF00009 Elongation factor Tu GTP binding domain CPIN17261_RS07220 PF03143 Elongation factor Tu C-terminal domain CPIN17261_RS07220 PF03144 Elongation factor Tu domain 2 CPIN17261_RS07255 PF00072 Response regulator receiver domain CPIN17261_RS07255 PF00196 Bacterial regulatory proteins, luxR family CPIN17261_RS07265 PF00529 HlyD membrane-fusion protein of T1SS CPIN17261_RS07265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPIN17261_RS07270 PF00005 ABC transporter CPIN17261_RS07270 PF03412 Peptidase C39 family CPIN17261_RS07270 PF00664 ABC transporter transmembrane region CPIN17261_RS07290 PF04055 Radical SAM superfamily CPIN17261_RS07290 PF06969 HemN C-terminal domain CPIN17261_RS07295 PF10788 Protein of unknown function (DUF2603) CPIN17261_RS07300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPIN17261_RS07300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPIN17261_RS07305 PF00490 Delta-aminolevulinic acid dehydratase CPIN17261_RS07310 PF00925 GTP cyclohydrolase II CPIN17261_RS07315 PF02527 rRNA small subunit methyltransferase G CPIN17261_RS07330 PF01435 Peptidase family M48 CPIN17261_RS07335 PF06039 Malate:quinone oxidoreductase (Mqo) CPIN17261_RS07340 PF00210 Ferritin-like domain CPIN17261_RS07345 PF02621 Menaquinone biosynthesis CPIN17261_RS07350 PF08274 PhnA Zinc-Ribbon CPIN17261_RS07350 PF03831 PhnA domain CPIN17261_RS07355 PF01098 Cell cycle protein CPIN17261_RS07360 PF01479 S4 domain CPIN17261_RS07360 PF00849 RNA pseudouridylate synthase CPIN17261_RS07370 PF02390 Putative methyltransferase CPIN17261_RS07375 PF09383 NIL domain CPIN17261_RS07375 PF00005 ABC transporter CPIN17261_RS07390 PF00202 Aminotransferase class-III CPIN17261_RS07400 PF00696 Amino acid kinase family CPIN17261_RS07405 PF01192 RNA polymerase Rpb6 CPIN17261_RS07410 PF13291 ACT domain CPIN17261_RS07410 PF02824 TGS domain CPIN17261_RS07410 PF04607 Region found in RelA / SpoT proteins CPIN17261_RS07415 PF00579 tRNA synthetases class I (W and Y) CPIN17261_RS07425 PF01520 N-acetylmuramoyl-L-alanine amidase CPIN17261_RS07425 PF11741 AMIN domain CPIN17261_RS07430 PF01266 FAD dependent oxidoreductase CPIN17261_RS07430 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CPIN17261_RS07455 PF13932 GidA associated domain CPIN17261_RS07455 PF01134 Glucose inhibited division protein A CPIN17261_RS07470 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CPIN17261_RS07475 PF00920 Dehydratase family CPIN17261_RS07480 PF13726 Na+-H+ antiporter family CPIN17261_RS07480 PF03553 Na+/H+ antiporter family CPIN17261_RS07515 PF00375 Sodium:dicarboxylate symporter family CPIN17261_RS07520 PF01594 AI-2E family transporter CPIN17261_RS07525 PF05491 RuvB C-terminal winged helix domain CPIN17261_RS07525 PF05496 Holliday junction DNA helicase RuvB P-loop domain CPIN17261_RS07525 PF17864 RuvB AAA lid domain CPIN17261_RS07530 PF03061 Thioesterase superfamily CPIN17261_RS07535 PF11490 DNA polymerase III polC-type N-terminus II CPIN17261_RS07535 PF07733 Bacterial DNA polymerase III alpha NTPase domain CPIN17261_RS07535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CPIN17261_RS07535 PF14579 Helix-hairpin-helix motif CPIN17261_RS07535 PF02811 PHP domain CPIN17261_RS07535 PF00929 Exonuclease CPIN17261_RS07535 PF01336 OB-fold nucleic acid binding domain CPIN17261_RS07540 PF00834 Ribulose-phosphate 3 epimerase family CPIN17261_RS07545 PF00830 Ribosomal L28 family CPIN17261_RS07555 PF00009 Elongation factor Tu GTP binding domain CPIN17261_RS07555 PF00679 Elongation factor G C-terminus CPIN17261_RS07555 PF06421 GTP-binding protein LepA C-terminus CPIN17261_RS07555 PF03144 Elongation factor Tu domain 2 CPIN17261_RS07570 PF01632 Ribosomal protein L35 CPIN17261_RS07575 PF00453 Ribosomal protein L20 CPIN17261_RS07585 PF05860 haemagglutination activity domain CPIN17261_RS07585 PF13332 Hemagglutinin repeat CPIN17261_RS07585 PF13018 Extended Signal Peptide of Type V secretion system CPIN17261_RS07585 PF02661 Fic/DOC family CPIN17261_RS07585 PF02661 Fic/DOC family CPIN17261_RS07585 PF13332 Hemagglutinin repeat CPIN17261_RS07585 PF03543 Yersinia/Haemophilus virulence surface antigen CPIN17261_RS07585 PF03543 Yersinia/Haemophilus virulence surface antigen CPIN17261_RS07585 PF13018 Extended Signal Peptide of Type V secretion system CPIN17261_RS07585 PF05860 haemagglutination activity domain CPIN17261_RS07590 PF08479 POTRA domain, ShlB-type CPIN17261_RS07590 PF17287 POTRA domain CPIN17261_RS07590 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CPIN17261_RS07605 PF01043 SecA preprotein cross-linking domain CPIN17261_RS07605 PF07517 SecA DEAD-like domain CPIN17261_RS07605 PF02810 SEC-C motif CPIN17261_RS07605 PF07516 SecA Wing and Scaffold domain CPIN17261_RS07620 PF02689 Helicase CPIN17261_RS07620 PF05970 PIF1-like helicase CPIN17261_RS07635 PF04748 Divergent polysaccharide deacetylase CPIN17261_RS07640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CPIN17261_RS07640 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CPIN17261_RS07650 PF00773 RNB domain CPIN17261_RS07660 PF01250 Ribosomal protein S6 CPIN17261_RS07665 PF00436 Single-strand binding protein family CPIN17261_RS07670 PF01084 Ribosomal protein S18 CPIN17261_RS07680 PF02673 Bacitracin resistance protein BacA CPIN17261_RS07685 PF02779 Transketolase, pyrimidine binding domain CPIN17261_RS07685 PF02780 Transketolase, C-terminal domain CPIN17261_RS07685 PF00456 Transketolase, thiamine diphosphate binding domain CPIN17261_RS07690 PF00348 Polyprenyl synthetase CPIN17261_RS07700 PF02575 YbaB/EbfC DNA-binding family CPIN17261_RS07705 PF13847 Methyltransferase domain CPIN17261_RS07715 PF00266 Aminotransferase class-V CPIN17261_RS07720 PF02601 Exonuclease VII, large subunit CPIN17261_RS07720 PF13742 OB-fold nucleic acid binding domain CPIN17261_RS07725 PF01209 ubiE/COQ5 methyltransferase family CPIN17261_RS07740 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CPIN17261_RS07740 PF02780 Transketolase, C-terminal domain CPIN17261_RS07740 PF02779 Transketolase, pyrimidine binding domain CPIN17261_RS07750 PF01706 FliG C-terminal domain CPIN17261_RS07750 PF14842 FliG N-terminal domain CPIN17261_RS07750 PF14841 FliG middle domain CPIN17261_RS07755 PF01514 Secretory protein of YscJ/FliF family CPIN17261_RS07755 PF08345 Flagellar M-ring protein C-terminal CPIN17261_RS07760 PF00155 Aminotransferase class I and II CPIN17261_RS07765 PF01842 ACT domain CPIN17261_RS07765 PF01817 Chorismate mutase type II CPIN17261_RS07765 PF00800 Prephenate dehydratase CPIN17261_RS07770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPIN17261_RS07770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPIN17261_RS07780 PF01195 Peptidyl-tRNA hydrolase CPIN17261_RS07785 PF14693 Ribosomal protein TL5, C-terminal domain CPIN17261_RS07785 PF01386 Ribosomal L25p family CPIN17261_RS07790 PF00437 Type II/IV secretion system protein CPIN17261_RS07795 PF00923 Transaldolase/Fructose-6-phosphate aldolase CPIN17261_RS07805 PF01584 CheW-like domain CPIN17261_RS07810 PF01584 CheW-like domain CPIN17261_RS07810 PF02895 Signal transducing histidine kinase, homodimeric domain CPIN17261_RS07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPIN17261_RS07810 PF01627 Hpt domain CPIN17261_RS07810 PF00072 Response regulator receiver domain CPIN17261_RS07815 PF01584 CheW-like domain CPIN17261_RS07815 PF00072 Response regulator receiver domain CPIN17261_RS07825 PF01272 Transcription elongation factor, GreA/GreB, C-term CPIN17261_RS07825 PF03449 Transcription elongation factor, N-terminal CPIN17261_RS07830 PF02684 Lipid-A-disaccharide synthetase CPIN17261_RS07835 PF00899 ThiF family CPIN17261_RS07840 PF01975 Survival protein SurE CPIN17261_RS07845 PF01235 Sodium:alanine symporter family CPIN17261_RS07850 PF03222 Tryptophan/tyrosine permease family CPIN17261_RS07855 PF03313 Serine dehydratase alpha chain CPIN17261_RS07855 PF03315 Serine dehydratase beta chain CPIN17261_RS07865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN17261_RS07865 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS07865 PF00384 Molybdopterin oxidoreductase CPIN17261_RS07870 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS07870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CPIN17261_RS07870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CPIN17261_RS07870 PF00384 Molybdopterin oxidoreductase CPIN17261_RS07870 PF12838 4Fe-4S dicluster domain CPIN17261_RS07875 PF13247 4Fe-4S dicluster domain CPIN17261_RS07880 PF00669 Bacterial flagellin N-terminal helical region CPIN17261_RS07880 PF07196 Flagellin hook IN motif CPIN17261_RS07880 PF00700 Bacterial flagellin C-terminal helical region CPIN17261_RS07885 PF03435 Saccharopine dehydrogenase NADP binding domain CPIN17261_RS07885 PF16653 Saccharopine dehydrogenase C-terminal domain CPIN17261_RS07890 PF01725 Ham1 family CPIN17261_RS07895 PF07690 Major Facilitator Superfamily CPIN17261_RS07900 PF10371 Domain of unknown function CPIN17261_RS07900 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CPIN17261_RS07900 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPIN17261_RS07900 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPIN17261_RS07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPIN17261_RS07920 PF00881 Nitroreductase family CPIN17261_RS07925 PF02525 Flavodoxin-like fold CPIN17261_RS07940 PF00113 Enolase, C-terminal TIM barrel domain CPIN17261_RS07940 PF03952 Enolase, N-terminal domain CPIN17261_RS07945 PF00154 recA bacterial DNA recombination protein CPIN17261_RS07950 PF01235 Sodium:alanine symporter family CPIN17261_RS07955 PF02322 Cytochrome bd terminal oxidase subunit II CPIN17261_RS07960 PF01654 Cytochrome bd terminal oxidase subunit I CPIN17261_RS07970 PF00117 Glutamine amidotransferase class-I CPIN17261_RS07970 PF06418 CTP synthase N-terminus CPIN17261_RS07975 PF17768 RecJ OB domain CPIN17261_RS07975 PF02272 DHHA1 domain CPIN17261_RS07975 PF01368 DHH family CPIN17261_RS07990 PF02142 MGS-like domain CPIN17261_RS07990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPIN17261_RS07990 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPIN17261_RS08005 PF07724 AAA domain (Cdc48 subfamily) CPIN17261_RS08005 PF06689 ClpX C4-type zinc finger CPIN17261_RS08005 PF10431 C-terminal, D2-small domain, of ClpB protein CPIN17261_RS08010 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CPIN17261_RS08010 PF00132 Bacterial transferase hexapeptide (six repeats) CPIN17261_RS08015 PF07977 FabA-like domain CPIN17261_RS08020 PF07963 Prokaryotic N-terminal methylation motif CPIN17261_RS08020 PF14245 Type IV pilin PilA CPIN17261_RS08040 PF01063 Amino-transferase class IV CPIN17261_RS08045 PF00578 AhpC/TSA family CPIN17261_RS08050 PF01361 Tautomerase enzyme CPIN17261_RS08080 PF00465 Iron-containing alcohol dehydrogenase CPIN17261_RS08085 PF01351 Ribonuclease HII CPIN17261_RS08105 PF03062 MBOAT, membrane-bound O-acyltransferase family CPIN17261_RS08110 PF00268 Ribonucleotide reductase, small chain CPIN17261_RS08120 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPIN17261_RS08120 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPIN17261_RS08125 PF03129 Anticodon binding domain CPIN17261_RS08125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPIN17261_RS08125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPIN17261_RS08130 PF05198 Translation initiation factor IF-3, N-terminal domain CPIN17261_RS08130 PF00707 Translation initiation factor IF-3, C-terminal domain CPIN17261_RS08145 PF12804 MobA-like NTP transferase domain CPIN17261_RS08150 PF04991 LicD family CPIN17261_RS08155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CPIN17261_RS08155 PF00925 GTP cyclohydrolase II CPIN17261_RS08165 PF18364 Molybdopterin oxidoreductase N-terminal domain CPIN17261_RS08165 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS08165 PF00384 Molybdopterin oxidoreductase CPIN17261_RS08180 PF18364 Molybdopterin oxidoreductase N-terminal domain CPIN17261_RS08180 PF01568 Molydopterin dinucleotide binding domain CPIN17261_RS08180 PF00384 Molybdopterin oxidoreductase CPIN17261_RS08220 PF00258 Flavodoxin CPIN17261_RS08225 PF02581 Thiamine monophosphate synthase CPIN17261_RS08225 PF17792 ThiD2 family CPIN17261_RS08230 PF01027 Inhibitor of apoptosis-promoting Bax1 CPIN17261_RS08235 PF00484 Carbonic anhydrase CPIN17261_RS08240 PF00924 Mechanosensitive ion channel CPIN17261_RS08245 PF00990 Diguanylate cyclase, GGDEF domain CPIN17261_RS08245 PF08448 PAS fold CPIN17261_RS08250 PF17158 Membrane-associated sensor, integral membrane domain CPIN17261_RS08250 PF00990 Diguanylate cyclase, GGDEF domain CPIN17261_RS08255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CPIN17261_RS08255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CPIN17261_RS08270 PF01261 Xylose isomerase-like TIM barrel CPIN17261_RS08280 PF13193 AMP-binding enzyme C-terminal domain CPIN17261_RS08280 PF00501 AMP-binding enzyme CPIN17261_RS08285 PF16450 Proteasomal ATPase OB C-terminal domain CPIN17261_RS08285 PF00004 ATPase family associated with various cellular activities (AAA) CPIN17261_RS08285 PF17758 Proteasomal ATPase OB N-terminal domain CPIN17261_RS08290 PF03840 Preprotein translocase SecG subunit CPIN17261_RS08295 PF01765 Ribosome recycling factor CPIN17261_RS08300 PF00156 Phosphoribosyl transferase domain CPIN17261_RS08310 PF08534 Redoxin CPIN17261_RS08315 PF08501 Shikimate dehydrogenase substrate binding domain CPIN17261_RS08330 PF00464 Serine hydroxymethyltransferase CPIN17261_RS08335 PF01336 OB-fold nucleic acid binding domain CPIN17261_RS08335 PF00152 tRNA synthetases class II (D, K and N) CPIN17261_RS08340 PF01475 Ferric uptake regulator family CPIN17261_RS08350 PF00437 Type II/IV secretion system protein CPIN17261_RS08355 PF02686 Glu-tRNAGln amidotransferase C subunit CPIN17261_RS08365 PF15437 Plasminogen-binding protein pgbA C-terminal CPIN17261_RS08375 PF03309 Type III pantothenate kinase CPIN17261_RS08390 PF00709 Adenylosuccinate synthetase CPIN17261_RS08395 PF00563 EAL domain CPIN17261_RS08395 PF00990 Diguanylate cyclase, GGDEF domain CPIN17261_RS08395 PF03707 Bacterial signalling protein N terminal repeat CPIN17261_RS08400 PF01546 Peptidase family M20/M25/M40 CPIN17261_RS08400 PF07687 Peptidase dimerisation domain CPIN17261_RS08405 PF03707 Bacterial signalling protein N terminal repeat CPIN17261_RS08405 PF00990 Diguanylate cyclase, GGDEF domain CPIN17261_RS08405 PF00563 EAL domain CPIN17261_RS08410 PF00488 MutS domain V CPIN17261_RS08410 PF01713 Smr domain CPIN17261_RS08425 PF02875 Mur ligase family, glutamate ligase domain CPIN17261_RS08425 PF01225 Mur ligase family, catalytic domain CPIN17261_RS08425 PF08245 Mur ligase middle domain CPIN17261_RS08430 PF13673 Acetyltransferase (GNAT) domain CPIN17261_RS08430 PF00958 GMP synthase C terminal domain CPIN17261_RS08430 PF00117 Glutamine amidotransferase class-I CPIN17261_RS08430 PF03352 Methyladenine glycosylase CPIN17261_RS08430 PF13302 Acetyltransferase (GNAT) domain CPIN17261_RS08450 PF08241 Methyltransferase domain CPIN17261_RS08455 PF13193 AMP-binding enzyme C-terminal domain CPIN17261_RS08455 PF00501 AMP-binding enzyme CPIN17261_RS08485 PF02423 Ornithine cyclodeaminase/mu-crystallin family CPIN17261_RS08495 PF00501 AMP-binding enzyme CPIN17261_RS08495 PF13193 AMP-binding enzyme C-terminal domain CPIN17261_RS08515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPIN17261_RS08515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPIN17261_RS08520 PF00551 Formyl transferase CPIN17261_RS08520 PF02911 Formyl transferase, C-terminal domain CPIN17261_RS08525 PF09940 Domain of unknown function (DUF2172) CPIN17261_RS08525 PF16254 Domain of unknown function (DUF4910) CPIN17261_RS08525 PF16221 winged helix-turn-helix CPIN17261_RS08530 PF13847 Methyltransferase domain CPIN17261_RS08530 PF10119 Predicted methyltransferase regulatory domain CPIN17261_RS08535 PF07196 Flagellin hook IN motif CPIN17261_RS08535 PF00700 Bacterial flagellin C-terminal helical region CPIN17261_RS08535 PF00669 Bacterial flagellin N-terminal helical region CPIN17261_RS08550 PF00700 Bacterial flagellin C-terminal helical region CPIN17261_RS08550 PF07196 Flagellin hook IN motif CPIN17261_RS08550 PF00669 Bacterial flagellin N-terminal helical region CPIN17261_RS08565 PF03653 Uncharacterised protein family (UPF0093) CPIN17261_RS08575 PF01252 Signal peptidase (SPase) II CPIN17261_RS08580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPIN17261_RS08580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPIN17261_RS08580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPIN17261_RS08580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPIN17261_RS08590 PF10442 FIST C domain CPIN17261_RS08590 PF00990 Diguanylate cyclase, GGDEF domain CPIN17261_RS08590 PF00563 EAL domain CPIN17261_RS08590 PF08495 FIST N domain CPIN17261_RS08595 PF14376 Haem-binding domain CPIN17261_RS08595 PF00034 Cytochrome c CPIN17261_RS08595 PF03150 Di-haem cytochrome c peroxidase CPIN17261_RS08610 PF00719 Inorganic pyrophosphatase CPIN17261_RS08640 PF02511 Thymidylate synthase complementing protein CPIN17261_RS08650 PF02609 Exonuclease VII small subunit CPIN17261_RS08655 PF00478 IMP dehydrogenase / GMP reductase domain CPIN17261_RS08655 PF00571 CBS domain CPIN17261_RS08660 PF01425 Amidase CPIN17261_RS08665 PF08264 Anticodon-binding domain of tRNA CPIN17261_RS08665 PF00133 tRNA synthetases class I (I, L, M and V) CPIN17261_RS08670 PF18146 Damage-inducible protein CinA KH domain CPIN17261_RS08670 PF00994 Probable molybdopterin binding domain CPIN17261_RS08670 PF02464 Competence-damaged protein CPIN17261_RS08675 PF03167 Uracil DNA glycosylase superfamily CPIN17261_RS08685 PF01016 Ribosomal L27 protein CPIN17261_RS08690 PF00829 Ribosomal prokaryotic L21 protein CPIN17261_RS08695 PF00034 Cytochrome c CPIN17261_RS08695 PF03150 Di-haem cytochrome c peroxidase CPIN17261_RS08700 PF01312 FlhB HrpN YscU SpaS Family CPIN17261_RS08710 PF02699 Preprotein translocase subunit CPIN17261_RS08715 PF02355 Protein export membrane protein CPIN17261_RS08720 PF02355 Protein export membrane protein CPIN17261_RS08720 PF07549 SecD/SecF GG Motif CPIN17261_RS08730 PF13603 Leucyl-tRNA synthetase, Domain 2 CPIN17261_RS08730 PF00133 tRNA synthetases class I (I, L, M and V) CPIN17261_RS08730 PF08264 Anticodon-binding domain of tRNA CPIN17261_RS08730 PF09334 tRNA synthetases class I (M) CPIN17261_RS08740 PF00990 Diguanylate cyclase, GGDEF domain CPIN17261_RS08750 PF02743 Cache domain CPIN17261_RS08750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPIN17261_RS08750 PF00672 HAMP domain CPIN17261_RS08755 PF13537 Glutamine amidotransferase domain CPIN17261_RS08755 PF00156 Phosphoribosyl transferase domain CPIN17261_RS08760 PF05173 Dihydrodipicolinate reductase, C-terminus CPIN17261_RS08760 PF01113 Dihydrodipicolinate reductase, N-terminus CPIN17261_RS08765 PF01595 Cyclin M transmembrane N-terminal domain CPIN17261_RS08765 PF00571 CBS domain CPIN17261_RS08765 PF03471 Transporter associated domain CPIN17261_RS08770 PF01042 Endoribonuclease L-PSP CPIN17261_RS08775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CPIN17261_RS08780 PF00873 AcrB/AcrD/AcrF family CPIN17261_RS08785 PF02321 Outer membrane efflux protein CPIN17261_RS08795 PF00764 Arginosuccinate synthase CPIN17261_RS08800 PF08275 DNA primase catalytic core, N-terminal domain CPIN17261_RS08800 PF01807 CHC2 zinc finger CPIN17261_RS08810 PF00075 RNase H CPIN17261_RS08815 PF00035 Double-stranded RNA binding motif CPIN17261_RS08815 PF14622 Ribonuclease-III-like CPIN17261_RS08820 PF01264 Chorismate synthase CPIN17261_RS08825 PF02075 Crossover junction endodeoxyribonuclease RuvC