##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM126942v1 #!genome-build-accession NCBI_Assembly:GCF_001269425.1 ##sequence-region NZ_CP011787.1 1 632672 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=186490 NZ_CP011787.1 RefSeq region 1 632672 . + . ID=id0;Dbxref=taxon:186490;Is_circular=true;Name=ANONYMOUS;collection-date=2008-01-01;country=USA: University of California%2C Berkeley;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Draeculacephala minerva;strain=B-GSS NZ_CP011787.1 RefSeq gene 1 1548 . + . ID=gene0;Name=AB162_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00005;old_locus_tag=AB162_001 NZ_CP011787.1 Protein Homology CDS 1 1548 . + 0 ID=cds0;Parent=gene0;Dbxref=Genbank:WP_053096392.1;Name=WP_053096392.1;gbkey=CDS;product=malate:quinone oxidoreductase;protein_id=WP_053096392.1;transl_table=11 NZ_CP011787.1 RefSeq gene 1609 2097 . + . ID=gene1;Name=AB162_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00010;old_locus_tag=AB162_002 NZ_CP011787.1 Protein Homology CDS 1609 2097 . + 0 ID=cds1;Parent=gene1;Dbxref=Genbank:WP_053096394.1;Name=WP_053096394.1;gbkey=CDS;product=tRNA adenosine deaminase;protein_id=WP_053096394.1;transl_table=11 NZ_CP011787.1 RefSeq gene 2201 6097 . + . ID=gene2;Name=AB162_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00015;old_locus_tag=AB162_003 NZ_CP011787.1 Protein Homology CDS 2201 6097 . + 0 ID=cds2;Parent=gene2;Dbxref=Genbank:WP_053096396.1;Name=WP_053096396.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_053096396.1;transl_table=11 NZ_CP011787.1 RefSeq gene 6239 7492 . + . ID=gene3;Name=AB162_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00020;old_locus_tag=AB162_004 NZ_CP011787.1 Protein Homology CDS 6239 7492 . + 0 ID=cds3;Parent=gene3;Dbxref=Genbank:WP_053096398.1;Name=WP_053096398.1;gbkey=CDS;product=serine hydroxymethyltransferase;protein_id=WP_053096398.1;transl_table=11 NZ_CP011787.1 RefSeq gene 7507 8295 . - . ID=gene4;Name=AB162_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00025;old_locus_tag=AB162_005 NZ_CP011787.1 Protein Homology CDS 7507 8295 . - 0 ID=cds4;Parent=gene4;Dbxref=Genbank:WP_053096400.1;Name=WP_053096400.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096400.1;transl_table=11 NZ_CP011787.1 RefSeq gene 8410 9583 . + . ID=gene5;Name=AB162_RS00030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS00030;old_locus_tag=AB162_006;pseudo=true NZ_CP011787.1 Protein Homology CDS 8410 9583 . + 0 ID=cds5;Parent=gene5;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;exception=annotated by transcript or proteomic data;gbkey=CDS;product=cysteine desulfurase;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 9670 10104 . + . ID=gene6;Name=AB162_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00035;old_locus_tag=AB162_007 NZ_CP011787.1 Protein Homology CDS 9670 10104 . + 0 ID=cds6;Parent=gene6;Dbxref=Genbank:WP_053096403.1;Name=WP_053096403.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;product=nucleoside diphosphate kinase;protein_id=WP_053096403.1;transl_table=11 NZ_CP011787.1 RefSeq gene 10152 11273 . + . ID=gene7;Name=AB162_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00040;old_locus_tag=AB162_008 NZ_CP011787.1 Protein Homology CDS 10152 11273 . + 0 ID=cds7;Parent=gene7;Dbxref=Genbank:WP_053096405.1;Name=WP_053096405.1;gbkey=CDS;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=WP_053096405.1;transl_table=11 NZ_CP011787.1 RefSeq gene 11296 12582 . + . ID=gene8;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AB162_RS00045;old_locus_tag=AB162_009 NZ_CP011787.1 Protein Homology CDS 11296 12582 . + 0 ID=cds8;Parent=gene8;Dbxref=Genbank:WP_053096407.1;Name=WP_053096407.1;Note=catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG;gbkey=CDS;gene=hisS;product=histidine--tRNA ligase;protein_id=WP_053096407.1;transl_table=11 NZ_CP011787.1 RefSeq gene 12824 14161 . + . ID=gene9;Name=AB162_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00050;old_locus_tag=AB162_010 NZ_CP011787.1 Protein Homology CDS 12824 14161 . + 0 ID=cds9;Parent=gene9;Dbxref=Genbank:WP_053096409.1;Name=WP_053096409.1;gbkey=CDS;product=GTP-binding protein Der;protein_id=WP_053096409.1;transl_table=11 NZ_CP011787.1 RefSeq gene 14348 16015 . + . ID=gene10;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AB162_RS00055;old_locus_tag=AB162_011 NZ_CP011787.1 Protein Homology CDS 14348 16015 . + 0 ID=cds10;Parent=gene10;Dbxref=Genbank:WP_053096411.1;Name=WP_053096411.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=WP_053096411.1;transl_table=11 NZ_CP011787.1 RefSeq gene 16097 17716 . - . ID=gene11;Name=AB162_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00060;old_locus_tag=AB162_012 NZ_CP011787.1 Protein Homology CDS 16097 17716 . - 0 ID=cds11;Parent=gene11;Dbxref=Genbank:WP_053096413.1;Name=WP_053096413.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;product=phosphoenolpyruvate carboxykinase;protein_id=WP_053096413.1;transl_table=11 NZ_CP011787.1 RefSeq gene 18219 19373 . + . ID=gene12;Name=AB162_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00065;old_locus_tag=AB162_013 NZ_CP011787.1 Protein Homology CDS 18219 19373 . + 0 ID=cds12;Parent=gene12;Dbxref=Genbank:WP_053096414.1;Name=WP_053096414.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;product=S-adenosylmethionine synthetase;protein_id=WP_053096414.1;transl_table=11 NZ_CP011787.1 RefSeq gene 20098 21516 . + . ID=gene13;Name=AB162_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00070;old_locus_tag=AB162_014 NZ_CP011787.1 Protein Homology CDS 20098 21516 . + 0 ID=cds13;Parent=gene13;Dbxref=Genbank:WP_053096416.1;Name=WP_053096416.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;product=recombinase RmuC;protein_id=WP_053096416.1;transl_table=11 NZ_CP011787.1 RefSeq gene 21638 22396 . + . ID=gene14;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AB162_RS00075;old_locus_tag=AB162_015 NZ_CP011787.1 Protein Homology CDS 21638 22396 . + 0 ID=cds14;Parent=gene14;Dbxref=Genbank:WP_053096418.1;Name=WP_053096418.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone;gbkey=CDS;gene=ubiE;product=ubiquinone biosynthesis methyltransferase UbiE;protein_id=WP_053096418.1;transl_table=11 NZ_CP011787.1 RefSeq gene 22417 23007 . + . ID=gene15;Name=AB162_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00080;old_locus_tag=AB162_016 NZ_CP011787.1 Protein Homology CDS 22417 23007 . + 0 ID=cds15;Parent=gene15;Dbxref=Genbank:WP_053096419.1;Name=WP_053096419.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096419.1;transl_table=11 NZ_CP011787.1 RefSeq gene 23011 24645 . + . ID=gene16;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=AB162_RS00085;old_locus_tag=AB162_017 NZ_CP011787.1 Protein Homology CDS 23011 24645 . + 0 ID=cds16;Parent=gene16;Dbxref=Genbank:WP_053096421.1;Name=WP_053096421.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=ubiquinone biosynthesis protein UbiB;protein_id=WP_053096421.1;transl_table=11 NZ_CP011787.1 RefSeq gene 24765 25583 . + . ID=gene17;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AB162_RS00090;old_locus_tag=AB162_018 NZ_CP011787.1 Protein Homology CDS 24765 25583 . + 0 ID=cds17;Parent=gene17;Dbxref=Genbank:WP_053096423.1;Name=WP_053096423.1;Note=catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate polyprenyltransferase;protein_id=WP_053096423.1;transl_table=11 NZ_CP011787.1 RefSeq gene 25598 28060 . - . ID=gene18;Name=AB162_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00095;old_locus_tag=AB162_019 NZ_CP011787.1 Protein Homology CDS 25598 28060 . - 0 ID=cds18;Parent=gene18;Dbxref=Genbank:WP_053096425.1;Name=WP_053096425.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;product=glycerol-3-phosphate acyltransferase;protein_id=WP_053096425.1;transl_table=11 NZ_CP011787.1 RefSeq gene 28196 29209 . - . ID=gene19;Name=AB162_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00100;old_locus_tag=AB162_020 NZ_CP011787.1 Protein Homology CDS 28196 29209 . - 0 ID=cds19;Parent=gene19;Dbxref=Genbank:WP_053096427.1;Name=WP_053096427.1;gbkey=CDS;product=tryptophanyl-tRNA synthetase;protein_id=WP_053096427.1;transl_table=11 NZ_CP011787.1 RefSeq gene 29287 29964 . - . ID=gene20;Name=AB162_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00105;old_locus_tag=AB162_021 NZ_CP011787.1 Protein Homology CDS 29287 29964 . - 0 ID=cds20;Parent=gene20;Dbxref=Genbank:WP_053096430.1;Name=WP_053096430.1;gbkey=CDS;product=ribulose phosphate epimerase;protein_id=WP_053096430.1;transl_table=11 NZ_CP011787.1 RefSeq gene 30336 30863 . - . ID=gene21;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AB162_RS00110;old_locus_tag=AB162_022 NZ_CP011787.1 Protein Homology CDS 30336 30863 . - 0 ID=cds21;Parent=gene21;Dbxref=Genbank:WP_053096432.1;Name=WP_053096432.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase;protein_id=WP_053096432.1;transl_table=11 NZ_CP011787.1 RefSeq gene 30992 31201 . + . ID=gene22;Name=AB162_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00115;old_locus_tag=AB162_023 NZ_CP011787.1 GeneMarkS+ CDS 30992 31201 . + 0 ID=cds22;Parent=gene22;Dbxref=Genbank:WP_053096434.1;Name=WP_053096434.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096434.1;transl_table=11 NZ_CP011787.1 RefSeq gene 31241 32608 . - . ID=gene23;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AB162_RS00120;old_locus_tag=AB162_024 NZ_CP011787.1 Protein Homology CDS 31241 32608 . - 0 ID=cds23;Parent=gene23;Dbxref=Genbank:WP_053096435.1;Name=WP_053096435.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=WP_053096435.1;transl_table=11 NZ_CP011787.1 RefSeq gene 32682 33344 . - . ID=gene24;Name=AB162_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00125;old_locus_tag=AB162_025 NZ_CP011787.1 Protein Homology CDS 32682 33344 . - 0 ID=cds24;Parent=gene24;Dbxref=Genbank:WP_053096438.1;Name=WP_053096438.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096438.1;transl_table=11 NZ_CP011787.1 RefSeq gene 34428 34676 . + . ID=gene25;Name=AB162_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00130;old_locus_tag=AB162_026 NZ_CP011787.1 Protein Homology CDS 34428 34676 . + 0 ID=cds25;Parent=gene25;Dbxref=Genbank:WP_053096440.1;Name=WP_053096440.1;gbkey=CDS;product=cell division protein BolA;protein_id=WP_053096440.1;transl_table=11 NZ_CP011787.1 RefSeq gene 34771 36033 . + . ID=gene26;Name=AB162_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00135;old_locus_tag=AB162_027 NZ_CP011787.1 Protein Homology CDS 34771 36033 . + 0 ID=cds26;Parent=gene26;Dbxref=Genbank:WP_053096442.1;Name=WP_053096442.1;gbkey=CDS;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_053096442.1;transl_table=11 NZ_CP011787.1 RefSeq gene 36096 37484 . - . ID=gene27;Name=AB162_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00140;old_locus_tag=AB162_028 NZ_CP011787.1 Protein Homology CDS 36096 37484 . - 0 ID=cds27;Parent=gene27;Dbxref=Genbank:WP_053096444.1;Name=WP_053096444.1;gbkey=CDS;product=serine endoprotease DegQ;protein_id=WP_053096444.1;transl_table=11 NZ_CP011787.1 RefSeq gene 38396 38824 . + . ID=gene28;Name=AB162_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00145;old_locus_tag=AB162_029 NZ_CP011787.1 Protein Homology CDS 38396 38824 . + 0 ID=cds28;Parent=gene28;Dbxref=Genbank:WP_053096446.1;Name=WP_053096446.1;gbkey=CDS;product=50S ribosomal protein L13;protein_id=WP_053096446.1;transl_table=11 NZ_CP011787.1 RefSeq gene 38840 39238 . + . ID=gene29;Name=AB162_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00150;old_locus_tag=AB162_030 NZ_CP011787.1 Protein Homology CDS 38840 39238 . + 0 ID=cds29;Parent=gene29;Dbxref=Genbank:WP_053096447.1;Name=WP_053096447.1;gbkey=CDS;product=30S ribosomal protein S9;protein_id=WP_053096447.1;transl_table=11 NZ_CP011787.1 RefSeq gene 39863 41479 . + . ID=gene30;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AB162_RS00155;old_locus_tag=AB162_031 NZ_CP011787.1 Protein Homology CDS 39863 41479 . + 0 ID=cds30;Parent=gene30;Dbxref=Genbank:WP_053096449.1;Name=WP_053096449.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=phosphoribosylaminoimidazolecarboxamide formyltransferase;protein_id=WP_053096449.1;transl_table=11 NZ_CP011787.1 RefSeq gene 41504 42793 . + . ID=gene31;Name=AB162_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00160;old_locus_tag=AB162_032 NZ_CP011787.1 Protein Homology CDS 41504 42793 . + 0 ID=cds31;Parent=gene31;Dbxref=Genbank:WP_053096450.1;Name=WP_053096450.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;product=phosphoribosylamine--glycine ligase;protein_id=WP_053096450.1;transl_table=11 NZ_CP011787.1 RefSeq gene 42862 43134 . - . ID=gene32;Name=AB162_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00165;old_locus_tag=AB162_033 NZ_CP011787.1 Protein Homology CDS 42862 43134 . - 0 ID=cds32;Parent=gene32;Dbxref=Genbank:WP_053096452.1;Name=WP_053096452.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_053096452.1;transl_table=11 NZ_CP011787.1 RefSeq gene 46078 46518 . + . ID=gene33;Name=AB162_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00170;old_locus_tag=AB162_035 NZ_CP011787.1 Protein Homology CDS 46078 46518 . + 0 ID=cds33;Parent=gene33;Dbxref=Genbank:WP_053096454.1;Name=WP_053096454.1;gbkey=CDS;product=acetyl-CoA carboxylase;protein_id=WP_053096454.1;transl_table=11 NZ_CP011787.1 RefSeq gene 46535 47878 . + . ID=gene34;Name=AB162_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00175;old_locus_tag=AB162_036 NZ_CP011787.1 Protein Homology CDS 46535 47878 . + 0 ID=cds34;Parent=gene34;Dbxref=Genbank:WP_053096456.1;Name=WP_053096456.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;product=acetyl-CoA carboxylase;protein_id=WP_053096456.1;transl_table=11 NZ_CP011787.1 RefSeq gene 48022 48669 . - . ID=gene35;Name=AB162_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00180;old_locus_tag=AB162_037 NZ_CP011787.1 Protein Homology CDS 48022 48669 . - 0 ID=cds35;Parent=gene35;Dbxref=Genbank:WP_053096458.1;Name=WP_053096458.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096458.1;transl_table=11 NZ_CP011787.1 RefSeq gene 49069 51123 . + . ID=gene36;Name=AB162_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00185;old_locus_tag=AB162_038 NZ_CP011787.1 Protein Homology CDS 49069 51123 . + 0 ID=cds36;Parent=gene36;Dbxref=Genbank:WP_053096460.1;Name=WP_053096460.1;gbkey=CDS;product=oligopeptidase A;protein_id=WP_053096460.1;transl_table=11 NZ_CP011787.1 RefSeq gene 51148 52629 . - . ID=gene37;Name=AB162_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00190;old_locus_tag=AB162_039 NZ_CP011787.1 Protein Homology CDS 51148 52629 . - 0 ID=cds37;Parent=gene37;Dbxref=Genbank:WP_053096461.1;Name=WP_053096461.1;Note=involved in the transport of inorganic phosphate;gbkey=CDS;product=phosphate transporter PitA;protein_id=WP_053096461.1;transl_table=11 NZ_CP011787.1 RefSeq gene 52881 53138 . + . ID=gene38;Name=AB162_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00195;old_locus_tag=AB162_040 NZ_CP011787.1 Protein Homology CDS 52881 53138 . + 0 ID=cds38;Parent=gene38;Dbxref=Genbank:WP_053096463.1;Name=WP_053096463.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096463.1;transl_table=11 NZ_CP011787.1 RefSeq gene 53255 54328 . + . ID=gene39;Name=AB162_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00200;old_locus_tag=AB162_041 NZ_CP011787.1 Protein Homology CDS 53255 54328 . + 0 ID=cds39;Parent=gene39;Dbxref=Genbank:WP_053096465.1;Name=WP_053096465.1;gbkey=CDS;product=signal recognition particle-docking protein FtsY;protein_id=WP_053096465.1;transl_table=11 NZ_CP011787.1 RefSeq gene 54732 55595 . + . ID=gene40;Name=AB162_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00205;old_locus_tag=AB162_042 NZ_CP011787.1 Protein Homology CDS 54732 55595 . + 0 ID=cds40;Parent=gene40;Dbxref=Genbank:WP_053096467.1;Name=WP_053096467.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;product=RNA polymerase factor sigma-32;protein_id=WP_053096467.1;transl_table=11 NZ_CP011787.1 RefSeq gene 55658 57127 . + . ID=gene41;Name=AB162_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00210;old_locus_tag=AB162_043 NZ_CP011787.1 Protein Homology CDS 55658 57127 . + 0 ID=cds41;Parent=gene41;Dbxref=Genbank:WP_053096469.1;Name=WP_053096469.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_053096469.1;transl_table=11 NZ_CP011787.1 RefSeq gene 57211 57915 . + . ID=gene42;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI;locus_tag=AB162_RS00215;old_locus_tag=AB162_044 NZ_CP011787.1 Protein Homology CDS 57211 57915 . + 0 ID=cds42;Parent=gene42;Dbxref=Genbank:WP_053096471.1;Name=WP_053096471.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=WP_053096471.1;transl_table=11 NZ_CP011787.1 RefSeq gene 58633 59118 . - . ID=gene43;Name=AB162_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00220;old_locus_tag=AB162_045 NZ_CP011787.1 Protein Homology CDS 58633 59118 . - 0 ID=cds43;Parent=gene43;Dbxref=Genbank:WP_053096473.1;Name=WP_053096473.1;gbkey=CDS;product=rRNA maturation RNase YbeY;protein_id=WP_053096473.1;transl_table=11 NZ_CP011787.1 RefSeq gene 59183 60544 . - . ID=gene44;Name=AB162_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00225;old_locus_tag=AB162_046 NZ_CP011787.1 Protein Homology CDS 59183 60544 . - 0 ID=cds44;Parent=gene44;Dbxref=Genbank:WP_053097350.1;Name=WP_053097350.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;product=(dimethylallyl)adenosine tRNA methylthiotransferase;protein_id=WP_053097350.1;transl_table=11 NZ_CP011787.1 RefSeq gene 60638 61818 . + . ID=gene45;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=pseudogene;gene_synonym=yleB;locus_tag=AB162_RS00230;old_locus_tag=AB162_047;pseudo=true NZ_CP011787.1 Protein Homology CDS 60638 61818 . + 0 ID=cds45;Parent=gene45;Note=catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 61952 63709 . - . ID=gene46;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AB162_RS00235;old_locus_tag=AB162_048 NZ_CP011787.1 Protein Homology CDS 61952 63709 . - 0 ID=cds46;Parent=gene46;Dbxref=Genbank:WP_053096475.1;Name=WP_053096475.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=aromatic ring-opening dioxygenase LigA;protein_id=WP_053096475.1;transl_table=11 NZ_CP011787.1 RefSeq gene 64814 65071 . + . ID=gene47;Name=AB162_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00240;old_locus_tag=AB162_051 NZ_CP011787.1 Protein Homology CDS 64814 65071 . + 0 ID=cds47;Parent=gene47;Dbxref=Genbank:WP_053096477.1;Name=WP_053096477.1;gbkey=CDS;product=PTS sugar transporter;protein_id=WP_053096477.1;transl_table=11 NZ_CP011787.1 RefSeq gene 65127 65248 . + . ID=gene48;Name=AB162_RS00245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS00245;pseudo=true NZ_CP011787.1 Protein Homology CDS 65127 65248 . + 0 ID=cds48;Parent=gene48;exception=annotated by transcript or proteomic data;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 65233 66867 . + . ID=gene49;Name=AB162_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00250;old_locus_tag=AB162_052 NZ_CP011787.1 Protein Homology CDS 65233 66867 . + 0 ID=cds49;Parent=gene49;Dbxref=Genbank:WP_053096479.1;Name=WP_053096479.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=WP_053096479.1;transl_table=11 NZ_CP011787.1 RefSeq gene 67018 67218 . - . ID=gene50;Name=AB162_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00255;old_locus_tag=AB162_053 NZ_CP011787.1 GeneMarkS+ CDS 67018 67218 . - 0 ID=cds50;Parent=gene50;Dbxref=Genbank:WP_053096481.1;Name=WP_053096481.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096481.1;transl_table=11 NZ_CP011787.1 RefSeq gene 67205 67417 . - . ID=gene51;Name=AB162_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00260 NZ_CP011787.1 GeneMarkS+ CDS 67205 67417 . - 0 ID=cds51;Parent=gene51;Dbxref=Genbank:WP_053096483.1;Name=WP_053096483.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096483.1;transl_table=11 NZ_CP011787.1 RefSeq gene 67796 68509 . - . ID=gene52;Name=AB162_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00265;old_locus_tag=AB162_054 NZ_CP011787.1 Protein Homology CDS 67796 68509 . - 0 ID=cds52;Parent=gene52;Dbxref=Genbank:WP_053096484.1;Name=WP_053096484.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=WP_053096484.1;transl_table=11 NZ_CP011787.1 RefSeq gene 68641 69024 . - . ID=gene53;Name=AB162_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00270;old_locus_tag=AB162_055 NZ_CP011787.1 GeneMarkS+ CDS 68641 69024 . - 0 ID=cds53;Parent=gene53;Dbxref=Genbank:WP_053096486.1;Name=WP_053096486.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096486.1;transl_table=11 NZ_CP011787.1 RefSeq gene 69302 70348 . + . ID=gene54;Name=AB162_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00275;old_locus_tag=AB162_056 NZ_CP011787.1 Protein Homology CDS 69302 70348 . + 0 ID=cds54;Parent=gene54;Dbxref=Genbank:WP_053097352.1;Name=WP_053097352.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;product=phosphoribosylaminoimidazole synthetase;protein_id=WP_053097352.1;transl_table=11 NZ_CP011787.1 RefSeq gene 70351 70992 . + . ID=gene55;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AB162_RS00280;old_locus_tag=AB162_057 NZ_CP011787.1 Protein Homology CDS 70351 70992 . + 0 ID=cds55;Parent=gene55;Dbxref=Genbank:WP_053096488.1;Name=WP_053096488.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_053096488.1;transl_table=11 NZ_CP011787.1 RefSeq gene 71294 73291 . - . ID=gene56;Name=AB162_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00285;old_locus_tag=AB162_058 NZ_CP011787.1 Protein Homology CDS 71294 73291 . - 0 ID=cds56;Parent=gene56;Dbxref=Genbank:WP_053096490.1;Name=WP_053096490.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;product=transketolase;protein_id=WP_053096490.1;transl_table=11 NZ_CP011787.1 RefSeq gene 73307 74260 . - . ID=gene57;Name=AB162_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00290;old_locus_tag=AB162_059 NZ_CP011787.1 Protein Homology CDS 73307 74260 . - 0 ID=cds57;Parent=gene57;Dbxref=Genbank:WP_053096492.1;Name=WP_053096492.1;gbkey=CDS;product=transaldolase;protein_id=WP_053096492.1;transl_table=11 NZ_CP011787.1 RefSeq gene 75353 75574 . + . ID=gene58;Name=AB162_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00295;old_locus_tag=AB162_060 NZ_CP011787.1 Protein Homology CDS 75353 75574 . + 0 ID=cds58;Parent=gene58;Dbxref=Genbank:WP_053096493.1;Name=WP_053096493.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096493.1;transl_table=11 NZ_CP011787.1 RefSeq gene 75621 76895 . - . ID=gene59;Name=AB162_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00300;old_locus_tag=AB162_061 NZ_CP011787.1 Protein Homology CDS 75621 76895 . - 0 ID=cds59;Parent=gene59;Dbxref=Genbank:WP_053096495.1;Name=WP_053096495.1;gbkey=CDS;product=tyrosyl-tRNA synthetase;protein_id=WP_053096495.1;transl_table=11 NZ_CP011787.1 RefSeq gene 77506 77937 . - . ID=gene60;Name=AB162_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00305;old_locus_tag=AB162_062 NZ_CP011787.1 Protein Homology CDS 77506 77937 . - 0 ID=cds60;Parent=gene60;Dbxref=Genbank:WP_053096497.1;Name=WP_053096497.1;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;product=transcriptional regulator SlyA;protein_id=WP_053096497.1;transl_table=11 NZ_CP011787.1 RefSeq gene 78397 79059 . + . ID=gene61;Name=AB162_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00310;old_locus_tag=AB162_063 NZ_CP011787.1 Protein Homology CDS 78397 79059 . + 0 ID=cds61;Parent=gene61;Dbxref=Genbank:WP_053096499.1;Name=WP_053096499.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;product=ribonuclease T;protein_id=WP_053096499.1;transl_table=11 NZ_CP011787.1 RefSeq gene 79076 79414 . - . ID=gene62;Name=AB162_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00315;old_locus_tag=AB162_064 NZ_CP011787.1 Protein Homology CDS 79076 79414 . - 0 ID=cds62;Parent=gene62;Dbxref=Genbank:WP_053096501.1;Name=WP_053096501.1;gbkey=CDS;product=glutaredoxin;protein_id=WP_053096501.1;transl_table=11 NZ_CP011787.1 RefSeq gene 79423 80061 . - . ID=gene63;Name=AB162_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00320;old_locus_tag=AB162_065 NZ_CP011787.1 Protein Homology CDS 79423 80061 . - 0 ID=cds63;Parent=gene63;Dbxref=Genbank:WP_053096503.1;Name=WP_053096503.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;product=riboflavin synthase subunit alpha;protein_id=WP_053096503.1;transl_table=11 NZ_CP011787.1 RefSeq gene 80313 80389 . + . ID=gene64;Name=AB162_RS00325;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00325;old_locus_tag=AB162_066 NZ_CP011787.1 tRNAscan-SE tRNA 80313 80389 . + . ID=rna0;Parent=gene64;anticodon=(pos:80347..80349);gbkey=tRNA;product=tRNA-Val NZ_CP011787.1 tRNAscan-SE exon 80313 80389 . + . ID=id1;Parent=rna0;anticodon=(pos:80347..80349);gbkey=tRNA;product=tRNA-Val NZ_CP011787.1 RefSeq gene 80486 80686 . + . ID=gene65;Name=AB162_RS00330;end_range=80686,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS00330;old_locus_tag=AB162_067;partial=true;pseudo=true NZ_CP011787.1 Protein Homology CDS 80486 80686 . + 0 ID=cds64;Parent=gene65;Note=major outer membrane lipoprotein%3B interacts with peptidoglycan to maintain the integrity of the cell envelope;end_range=80686,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=murein lipoprotein;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq repeat_region 80681 80811 . + . ID=id2;gbkey=repeat_region NZ_CP011787.1 RefSeq gene 80829 80900 . - . ID=gene66;Name=AB162_RS00335;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00335;old_locus_tag=AB162_068 NZ_CP011787.1 tRNAscan-SE tRNA 80829 80900 . - . ID=rna1;Parent=gene66;anticodon=(pos:complement(80867..80869));gbkey=tRNA;product=tRNA-Gln NZ_CP011787.1 tRNAscan-SE exon 80829 80900 . - . ID=id3;Parent=rna1;anticodon=(pos:complement(80867..80869));gbkey=tRNA;product=tRNA-Gln NZ_CP011787.1 RefSeq gene 80919 80992 . - . ID=gene67;Name=AB162_RS00340;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00340;old_locus_tag=AB162_069 NZ_CP011787.1 tRNAscan-SE tRNA 80919 80992 . - . ID=rna2;Parent=gene67;anticodon=(pos:complement(80956..80958));gbkey=tRNA;product=tRNA-Met NZ_CP011787.1 tRNAscan-SE exon 80919 80992 . - . ID=id4;Parent=rna2;anticodon=(pos:complement(80956..80958));gbkey=tRNA;product=tRNA-Met NZ_CP011787.1 RefSeq gene 81022 81106 . - . ID=gene68;Name=AB162_RS00345;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00345;old_locus_tag=AB162_070 NZ_CP011787.1 tRNAscan-SE tRNA 81022 81106 . - . ID=rna3;Parent=gene68;anticodon=(pos:complement(81070..81072));gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 tRNAscan-SE exon 81022 81106 . - . ID=id5;Parent=rna3;anticodon=(pos:complement(81070..81072));gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 RefSeq gene 81242 82906 . + . ID=gene69;Name=AB162_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00350;old_locus_tag=AB162_071 NZ_CP011787.1 Protein Homology CDS 81242 82906 . + 0 ID=cds65;Parent=gene69;Dbxref=Genbank:WP_053097354.1;Name=WP_053097354.1;gbkey=CDS;product=glutamine--tRNA ligase;protein_id=WP_053097354.1;transl_table=11 NZ_CP011787.1 RefSeq gene 82979 83494 . - . ID=gene70;Name=AB162_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00355;old_locus_tag=AB162_072 NZ_CP011787.1 Protein Homology CDS 82979 83494 . - 0 ID=cds66;Parent=gene70;Dbxref=Genbank:WP_053096505.1;Name=WP_053096505.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;product=flavodoxin FldA;protein_id=WP_053096505.1;transl_table=11 NZ_CP011787.1 RefSeq gene 83654 85150 . + . ID=gene71;Name=AB162_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00360;old_locus_tag=AB162_073 NZ_CP011787.1 Protein Homology CDS 83654 85150 . + 0 ID=cds67;Parent=gene71;Dbxref=Genbank:WP_053096508.1;Name=WP_053096508.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;product=deoxyribodipyrimidine photolyase;protein_id=WP_053096508.1;transl_table=11 NZ_CP011787.1 RefSeq gene 85170 85916 . + . ID=gene72;Name=AB162_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00365;old_locus_tag=AB162_074 NZ_CP011787.1 Protein Homology CDS 85170 85916 . + 0 ID=cds68;Parent=gene72;Dbxref=Genbank:WP_053096510.1;Name=WP_053096510.1;gbkey=CDS;product=metal-binding protein;protein_id=WP_053096510.1;transl_table=11 NZ_CP011787.1 RefSeq gene 86041 86736 . + . ID=gene73;Name=AB162_RS00370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS00370;pseudo=true NZ_CP011787.1 Protein Homology CDS 86041 86736 . + 0 ID=cds69;Parent=gene73;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_except=(pos:86077..86079%2Caa:Other),(pos:86122..86124%2Caa:Other),(pos:86179..86181%2Caa:Other);transl_table=11 NZ_CP011787.1 RefSeq gene 88194 89365 . + . ID=gene74;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=pseudogene;locus_tag=AB162_RS00375;pseudo=true NZ_CP011787.1 Protein Homology CDS 88194 89365 . + 0 ID=cds70;Parent=gene74;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=tolB;product=translocation protein TolB;pseudo=true;transl_except=(pos:88200..88202%2Caa:Other),(pos:88221..88223%2Caa:Other),(pos:88245..88247%2Caa:Other),(pos:88272..88274%2Caa:Other),(pos:88338..88340%2Caa:Other),(pos:88701..88703%2Caa:Other),(pos:88950..88952%2Caa:Other),(pos:89028..89030%2Caa:Other),(pos:89040..89042%2Caa:Other);transl_table=11 NZ_CP011787.1 RefSeq gene 89400 89951 . + . ID=gene75;Name=AB162_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00380;old_locus_tag=AB162_079 NZ_CP011787.1 Protein Homology CDS 89400 89951 . + 0 ID=cds71;Parent=gene75;Dbxref=Genbank:WP_053096512.1;Name=WP_053096512.1;gbkey=CDS;product=peptidoglycan-associated outer membrane lipoprotein;protein_id=WP_053096512.1;transl_table=11 NZ_CP011787.1 RefSeq gene 90284 91312 . + . ID=gene76;Name=AB162_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00385;old_locus_tag=AB162_081 NZ_CP011787.1 Protein Homology CDS 90284 91312 . + 0 ID=cds72;Parent=gene76;Dbxref=Genbank:WP_053097356.1;Name=WP_053097356.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;product=quinolinate synthetase;protein_id=WP_053097356.1;transl_table=11 NZ_CP011787.1 RefSeq gene 91351 92769 . - . ID=gene77;Name=AB162_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00390;old_locus_tag=AB162_082 NZ_CP011787.1 Protein Homology CDS 91351 92769 . - 0 ID=cds73;Parent=gene77;Dbxref=Genbank:WP_053096514.1;Name=WP_053096514.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096514.1;transl_table=11 NZ_CP011787.1 RefSeq gene 92801 94447 . - . ID=gene78;Name=AB162_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00395;old_locus_tag=AB162_083 NZ_CP011787.1 Protein Homology CDS 92801 94447 . - 0 ID=cds74;Parent=gene78;Dbxref=Genbank:WP_053096516.1;Name=WP_053096516.1;gbkey=CDS;product=sodium:proton antiporter;protein_id=WP_053096516.1;transl_table=11 NZ_CP011787.1 RefSeq gene 94762 95649 . - . ID=gene79;Name=AB162_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00400;old_locus_tag=AB162_084 NZ_CP011787.1 Protein Homology CDS 94762 95649 . - 0 ID=cds75;Parent=gene79;Dbxref=Genbank:WP_053096518.1;Name=WP_053096518.1;gbkey=CDS;product=iron ABC transporter;protein_id=WP_053096518.1;transl_table=11 NZ_CP011787.1 RefSeq gene 95777 96394 . - . ID=gene80;Name=AB162_RS00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS00405;old_locus_tag=AB162_085;partial=true;pseudo=true;start_range=.,95777 NZ_CP011787.1 Protein Homology CDS 95777 96394 . - 0 ID=cds76;Parent=gene80;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ABC transporter;pseudo=true;start_range=.,95777;transl_table=11 NZ_CP011787.1 RefSeq gene 96625 97089 . - . ID=gene81;Name=AB162_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00410;old_locus_tag=AB162_086 NZ_CP011787.1 Protein Homology CDS 96625 97089 . - 0 ID=cds77;Parent=gene81;Dbxref=Genbank:WP_053096521.1;Name=WP_053096521.1;gbkey=CDS;product=single-stranded DNA-binding protein;protein_id=WP_053096521.1;transl_table=11 NZ_CP011787.1 RefSeq gene 97784 99085 . + . ID=gene82;Name=AB162_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00415;old_locus_tag=AB162_087 NZ_CP011787.1 Protein Homology CDS 97784 99085 . + 0 ID=cds78;Parent=gene82;Dbxref=Genbank:WP_053096523.1;Name=WP_053096523.1;gbkey=CDS;product=glutamate:protein symporter;protein_id=WP_053096523.1;transl_table=11 NZ_CP011787.1 RefSeq gene 99657 100082 . + . ID=gene83;Name=AB162_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00420;old_locus_tag=AB162_088 NZ_CP011787.1 Protein Homology CDS 99657 100082 . + 0 ID=cds79;Parent=gene83;Dbxref=Genbank:WP_053096525.1;Name=WP_053096525.1;gbkey=CDS;product=MarR family transcriptional regulator;protein_id=WP_053096525.1;transl_table=11 NZ_CP011787.1 RefSeq gene 100285 100920 . + . ID=gene84;Name=AB162_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00425;old_locus_tag=AB162_089 NZ_CP011787.1 Protein Homology CDS 100285 100920 . + 0 ID=cds80;Parent=gene84;Dbxref=Genbank:WP_053096527.1;Name=WP_053096527.1;gbkey=CDS;product=guanylate kinase;protein_id=WP_053096527.1;transl_table=11 NZ_CP011787.1 RefSeq gene 101272 103374 . + . ID=gene85;Name=AB162_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00430;old_locus_tag=AB162_090 NZ_CP011787.1 Protein Homology CDS 101272 103374 . + 0 ID=cds81;Parent=gene85;Dbxref=Genbank:WP_053096529.1;Name=WP_053096529.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;product=ATP-dependent DNA helicase RecG;protein_id=WP_053096529.1;transl_table=11 NZ_CP011787.1 RefSeq gene 103452 104063 . + . ID=gene86;Name=AB162_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00435;old_locus_tag=AB162_091 NZ_CP011787.1 Protein Homology CDS 103452 104063 . + 0 ID=cds82;Parent=gene86;Dbxref=Genbank:WP_053096531.1;Name=WP_053096531.1;gbkey=CDS;product=GTP-binding protein;protein_id=WP_053096531.1;transl_table=11 NZ_CP011787.1 RefSeq gene 104101 106863 . - . ID=gene87;Name=AB162_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00440;old_locus_tag=AB162_092 NZ_CP011787.1 Protein Homology CDS 104101 106863 . - 0 ID=cds83;Parent=gene87;Dbxref=Genbank:WP_053096533.1;Name=WP_053096533.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;product=DNA polymerase I;protein_id=WP_053096533.1;transl_table=11 NZ_CP011787.1 RefSeq gene 107133 108275 . + . ID=gene88;Name=AB162_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00445;old_locus_tag=AB162_093 NZ_CP011787.1 Protein Homology CDS 107133 108275 . + 0 ID=cds84;Parent=gene88;Dbxref=Genbank:WP_053096535.1;Name=WP_053096535.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096535.1;transl_table=11 NZ_CP011787.1 RefSeq gene 108492 108821 . + . ID=gene89;Name=AB162_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00450;old_locus_tag=AB162_094 NZ_CP011787.1 Protein Homology CDS 108492 108821 . + 0 ID=cds85;Parent=gene89;Dbxref=Genbank:WP_053096536.1;Name=WP_053096536.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096536.1;transl_table=11 NZ_CP011787.1 RefSeq gene 109071 110996 . + . ID=gene90;Name=AB162_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00455;old_locus_tag=AB162_095 NZ_CP011787.1 Protein Homology CDS 109071 110996 . + 0 ID=cds86;Parent=gene90;Dbxref=Genbank:WP_053096538.1;Name=WP_053096538.1;Note=molecular chaperone;gbkey=CDS;product=heat-shock protein Hsp90;protein_id=WP_053096538.1;transl_table=11 NZ_CP011787.1 RefSeq gene 111022 111684 . + . ID=gene91;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AB162_RS00460;old_locus_tag=AB162_096 NZ_CP011787.1 Protein Homology CDS 111022 111684 . + 0 ID=cds87;Parent=gene91;Dbxref=Genbank:WP_053096540.1;Name=WP_053096540.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=WP_053096540.1;transl_table=11 NZ_CP011787.1 RefSeq gene 111688 112761 . - . ID=gene92;Name=AB162_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00465;old_locus_tag=AB162_097 NZ_CP011787.1 Protein Homology CDS 111688 112761 . - 0 ID=cds88;Parent=gene92;Dbxref=Genbank:WP_053096542.1;Name=WP_053096542.1;gbkey=CDS;product=phosphoribosylaminoimidazole carboxylase;protein_id=WP_053096542.1;transl_table=11 NZ_CP011787.1 RefSeq gene 112758 113267 . - . ID=gene93;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AB162_RS00470;old_locus_tag=AB162_098 NZ_CP011787.1 Protein Homology CDS 112758 113267 . - 0 ID=cds89;Parent=gene93;Dbxref=Genbank:WP_053096544.1;Name=WP_053096544.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=WP_053096544.1;transl_table=11 NZ_CP011787.1 RefSeq gene 113395 114831 . + . ID=gene94;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=pseudogene;locus_tag=AB162_RS00475;old_locus_tag=AB162_099;pseudo=true NZ_CP011787.1 Protein Homology CDS 113395 114831 . + 0 ID=cds90;Parent=gene94;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteine--tRNA ligase;pseudo=true;transl_except=(pos:113449..113451%2Caa:Other);transl_table=11 NZ_CP011787.1 RefSeq gene 114858 115718 . - . ID=gene95;Name=AB162_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00480;old_locus_tag=AB162_100 NZ_CP011787.1 Protein Homology CDS 114858 115718 . - 0 ID=cds91;Parent=gene95;Dbxref=Genbank:WP_053096546.1;Name=WP_053096546.1;gbkey=CDS;product=methenyltetrahydrofolate cyclohydrolase;protein_id=WP_053096546.1;transl_table=11 NZ_CP011787.1 RefSeq gene 115865 115939 . + . ID=gene96;Name=AB162_RS00485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00485;old_locus_tag=AB162_101 NZ_CP011787.1 tRNAscan-SE tRNA 115865 115939 . + . ID=rna4;Parent=gene96;anticodon=(pos:115900..115902);gbkey=tRNA;product=tRNA-Arg NZ_CP011787.1 tRNAscan-SE exon 115865 115939 . + . ID=id6;Parent=rna4;anticodon=(pos:115900..115902);gbkey=tRNA;product=tRNA-Arg NZ_CP011787.1 RefSeq gene 116210 117475 . + . ID=gene97;Name=AB162_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00490;old_locus_tag=AB162_102 NZ_CP011787.1 Protein Homology CDS 116210 117475 . + 0 ID=cds92;Parent=gene97;Dbxref=Genbank:WP_053096548.1;Name=WP_053096548.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096548.1;transl_table=11 NZ_CP011787.1 RefSeq gene 118548 119264 . + . ID=gene98;Name=AB162_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00495;old_locus_tag=AB162_104 NZ_CP011787.1 Protein Homology CDS 118548 119264 . + 0 ID=cds93;Parent=gene98;Dbxref=Genbank:WP_053096550.1;Name=WP_053096550.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;product=flavin mononucleotide phosphatase;protein_id=WP_053096550.1;transl_table=11 NZ_CP011787.1 RefSeq gene 119314 121254 . + . ID=gene99;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=AB162_RS00500;old_locus_tag=AB162_105 NZ_CP011787.1 Protein Homology CDS 119314 121254 . + 0 ID=cds94;Parent=gene99;Dbxref=Genbank:WP_053096552.1;Name=WP_053096552.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase II;protein_id=WP_053096552.1;transl_table=11 NZ_CP011787.1 RefSeq gene 121446 122396 . + . ID=gene100;Name=AB162_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00505;old_locus_tag=AB162_106 NZ_CP011787.1 Protein Homology CDS 121446 122396 . + 0 ID=cds95;Parent=gene100;Dbxref=Genbank:WP_053096554.1;Name=WP_053096554.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;product=magnesium transporter CorA;protein_id=WP_053096554.1;transl_table=11 NZ_CP011787.1 RefSeq gene 122467 123471 . + . ID=gene101;Name=AB162_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00510;old_locus_tag=AB162_107 NZ_CP011787.1 Protein Homology CDS 122467 123471 . + 0 ID=cds96;Parent=gene101;Dbxref=Genbank:WP_053097357.1;Name=WP_053097357.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097357.1;transl_table=11 NZ_CP011787.1 RefSeq gene 123521 125920 . - . ID=gene102;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AB162_RS00515;old_locus_tag=AB162_108 NZ_CP011787.1 Protein Homology CDS 123521 125920 . - 0 ID=cds97;Parent=gene102;Dbxref=Genbank:WP_053096556.1;Name=WP_053096556.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=WP_053096556.1;transl_table=11 NZ_CP011787.1 RefSeq gene 126278 126772 . + . ID=gene103;Name=AB162_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00520;old_locus_tag=AB162_109 NZ_CP011787.1 Protein Homology CDS 126278 126772 . + 0 ID=cds98;Parent=gene103;Dbxref=Genbank:WP_053096557.1;Name=WP_053096557.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096557.1;transl_table=11 NZ_CP011787.1 RefSeq gene 126804 127910 . - . ID=gene104;Name=AB162_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00525;old_locus_tag=AB162_110 NZ_CP011787.1 Protein Homology CDS 126804 127910 . - 0 ID=cds99;Parent=gene104;Dbxref=Genbank:WP_053096559.1;Name=WP_053096559.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;product=DNA polymerase III subunit beta;protein_id=WP_053096559.1;transl_table=11 NZ_CP011787.1 RefSeq gene 127932 129233 . - . ID=gene105;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AB162_RS00530;old_locus_tag=AB162_111 NZ_CP011787.1 Protein Homology CDS 127932 129233 . - 0 ID=cds100;Parent=gene105;Dbxref=Genbank:WP_053096561.1;Name=WP_053096561.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosomal replication initiation protein;protein_id=WP_053096561.1;transl_table=11 NZ_CP011787.1 RefSeq gene 129430 129570 . + . ID=gene106;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AB162_RS00535;old_locus_tag=AB162_112 NZ_CP011787.1 Protein Homology CDS 129430 129570 . + 0 ID=cds101;Parent=gene106;Dbxref=Genbank:WP_053096563.1;Name=WP_053096563.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=WP_053096563.1;transl_table=11 NZ_CP011787.1 RefSeq gene 129593 129943 . + . ID=gene107;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AB162_RS00540;old_locus_tag=AB162_113 NZ_CP011787.1 Protein Homology CDS 129593 129943 . + 0 ID=cds102;Parent=gene107;Dbxref=Genbank:WP_053096565.1;Name=WP_053096565.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P protein component;protein_id=WP_053096565.1;transl_table=11 NZ_CP011787.1 RefSeq gene 129919 130176 . + . ID=gene108;Name=AB162_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00545;old_locus_tag=AB162_114 NZ_CP011787.1 Protein Homology CDS 129919 130176 . + 0 ID=cds103;Parent=gene108;Dbxref=Genbank:WP_053096567.1;Name=WP_053096567.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096567.1;transl_table=11 NZ_CP011787.1 RefSeq gene 130179 131792 . + . ID=gene109;Name=AB162_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00550;old_locus_tag=AB162_115 NZ_CP011787.1 Protein Homology CDS 130179 131792 . + 0 ID=cds104;Parent=gene109;Dbxref=Genbank:WP_053096569.1;Name=WP_053096569.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;product=insertase;protein_id=WP_053096569.1;transl_table=11 NZ_CP011787.1 RefSeq gene 131794 133167 . + . ID=gene110;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=AB162_RS00555;old_locus_tag=AB162_116 NZ_CP011787.1 Protein Homology CDS 131794 133167 . + 0 ID=cds105;Parent=gene110;Dbxref=Genbank:WP_053096571.1;Name=WP_053096571.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;product=tRNA modification GTPase TrmE;protein_id=WP_053096571.1;transl_table=11 NZ_CP011787.1 RefSeq gene 133219 135060 . - . ID=gene111;Name=AB162_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00560;old_locus_tag=AB162_117 NZ_CP011787.1 Protein Homology CDS 133219 135060 . - 0 ID=cds106;Parent=gene111;Dbxref=Genbank:WP_053096573.1;Name=WP_053096573.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=WP_053096573.1;transl_table=11 NZ_CP011787.1 RefSeq gene 135185 136555 . - . ID=gene112;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AB162_RS00565;old_locus_tag=AB162_118 NZ_CP011787.1 Protein Homology CDS 135185 136555 . - 0 ID=cds107;Parent=gene112;Dbxref=Genbank:WP_053096576.1;Name=WP_053096576.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=WP_053096576.1;transl_table=11 NZ_CP011787.1 RefSeq gene 136621 137049 . - . ID=gene113;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AB162_RS00570;old_locus_tag=AB162_119 NZ_CP011787.1 Protein Homology CDS 136621 137049 . - 0 ID=cds108;Parent=gene113;Dbxref=Genbank:WP_053096578.1;Name=WP_053096578.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase F0F1 subunit epsilon;protein_id=WP_053096578.1;transl_table=11 NZ_CP011787.1 RefSeq gene 137080 138465 . - . ID=gene114;Name=AB162_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00575;old_locus_tag=AB162_120 NZ_CP011787.1 Protein Homology CDS 137080 138465 . - 0 ID=cds109;Parent=gene114;Dbxref=Genbank:WP_053096580.1;Name=WP_053096580.1;gbkey=CDS;product=ATP synthase F0F1 subunit beta;protein_id=WP_053096580.1;transl_table=11 NZ_CP011787.1 RefSeq gene 138495 139358 . - . ID=gene115;Name=AB162_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00580;old_locus_tag=AB162_121 NZ_CP011787.1 Protein Homology CDS 138495 139358 . - 0 ID=cds110;Parent=gene115;Dbxref=Genbank:WP_053096583.1;Name=WP_053096583.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;product=ATP F0F1 synthase subunit gamma;protein_id=WP_053096583.1;transl_table=11 NZ_CP011787.1 RefSeq gene 139402 140955 . - . ID=gene116;Name=AB162_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00585;old_locus_tag=AB162_122 NZ_CP011787.1 Protein Homology CDS 139402 140955 . - 0 ID=cds111;Parent=gene116;Dbxref=Genbank:WP_053097360.1;Name=WP_053097360.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;product=ATP F0F1 synthase subunit alpha;protein_id=WP_053097360.1;transl_table=11 NZ_CP011787.1 RefSeq gene 140980 141516 . - . ID=gene117;Name=AB162_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00590;old_locus_tag=AB162_123 NZ_CP011787.1 Protein Homology CDS 140980 141516 . - 0 ID=cds112;Parent=gene117;Dbxref=Genbank:WP_053096585.1;Name=WP_053096585.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096585.1;transl_table=11 NZ_CP011787.1 RefSeq gene 141524 142000 . - . ID=gene118;Name=AB162_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00595;old_locus_tag=AB162_124 NZ_CP011787.1 Protein Homology CDS 141524 142000 . - 0 ID=cds113;Parent=gene118;Dbxref=Genbank:WP_053096587.1;Name=WP_053096587.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096587.1;transl_table=11 NZ_CP011787.1 RefSeq gene 142021 142260 . - . ID=gene119;Name=AB162_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00600;old_locus_tag=AB162_125 NZ_CP011787.1 Protein Homology CDS 142021 142260 . - 0 ID=cds114;Parent=gene119;Dbxref=Genbank:WP_053096589.1;Name=WP_053096589.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;product=ATP F0F1 synthase subunit C;protein_id=WP_053096589.1;transl_table=11 NZ_CP011787.1 RefSeq gene 142294 143139 . - . ID=gene120;Name=AB162_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00605;old_locus_tag=AB162_126 NZ_CP011787.1 Protein Homology CDS 142294 143139 . - 0 ID=cds115;Parent=gene120;Dbxref=Genbank:WP_053096591.1;Name=WP_053096591.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;product=ATP synthase F0F1 subunit A;protein_id=WP_053096591.1;transl_table=11 NZ_CP011787.1 RefSeq gene 143213 145111 . - . ID=gene121;Name=AB162_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00610;old_locus_tag=AB162_127 NZ_CP011787.1 Protein Homology CDS 143213 145111 . - 0 ID=cds116;Parent=gene121;Dbxref=Genbank:WP_053096592.1;Name=WP_053096592.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096592.1;transl_table=11 NZ_CP011787.1 RefSeq gene 145195 146163 . - . ID=gene122;Name=AB162_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00615;old_locus_tag=AB162_128 NZ_CP011787.1 Protein Homology CDS 145195 146163 . - 0 ID=cds117;Parent=gene122;Dbxref=Genbank:WP_053096594.1;Name=WP_053096594.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096594.1;transl_table=11 NZ_CP011787.1 RefSeq gene 146238 147992 . + . ID=gene123;Name=AB162_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00620;old_locus_tag=AB162_129 NZ_CP011787.1 Protein Homology CDS 146238 147992 . + 0 ID=cds118;Parent=gene123;Dbxref=Genbank:WP_053096596.1;Name=WP_053096596.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;product=ssDNA exonuclease RecJ;protein_id=WP_053096596.1;transl_table=11 NZ_CP011787.1 RefSeq gene 148088 149182 . + . ID=gene124;Name=AB162_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00625;old_locus_tag=AB162_130 NZ_CP011787.1 Protein Homology CDS 148088 149182 . + 0 ID=cds119;Parent=gene124;Dbxref=Genbank:WP_053096598.1;Name=WP_053096598.1;gbkey=CDS;product=peptide chain release factor 2;protein_id=WP_053096598.1;transl_table=11 NZ_CP011787.1 RefSeq gene 149189 150721 . + . ID=gene125;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AB162_RS00630;old_locus_tag=AB162_131 NZ_CP011787.1 Protein Homology CDS 149189 150721 . + 0 ID=cds120;Parent=gene125;Dbxref=Genbank:WP_053096600.1;Name=WP_053096600.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;product=lysine--tRNA ligase;protein_id=WP_053096600.1;transl_table=11 NZ_CP011787.1 RefSeq gene 150708 151544 . + . ID=gene126;Name=AB162_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00635;old_locus_tag=AB162_132 NZ_CP011787.1 Protein Homology CDS 150708 151544 . + 0 ID=cds121;Parent=gene126;Dbxref=Genbank:WP_053096603.1;Name=WP_053096603.1;Note=converts L-glutamate to D-glutamate%2C a component of peptidoglycan;gbkey=CDS;product=glutamate racemase;protein_id=WP_053096603.1;transl_table=11 NZ_CP011787.1 RefSeq repeat_region 151458 153365 . + . ID=id7;gbkey=repeat_region NZ_CP011787.1 RefSeq gene 151733 153289 . + . ID=gene127;Name=AB162_RS00640;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB162_RS00640;old_locus_tag=AB162_133 NZ_CP011787.1 RefSeq rRNA 151733 153289 . + . ID=rna5;Parent=gene127;gbkey=rRNA;product=16S ribosomal RNA NZ_CP011787.1 RefSeq exon 151733 153289 . + . ID=id8;Parent=rna5;gbkey=rRNA;product=16S ribosomal RNA NZ_CP011787.1 RefSeq gene 153406 153481 . + . ID=gene128;Name=AB162_RS00645;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00645;old_locus_tag=AB162_134 NZ_CP011787.1 tRNAscan-SE tRNA 153406 153481 . + . ID=rna6;Parent=gene128;anticodon=(pos:153440..153442);gbkey=tRNA;product=tRNA-Glu NZ_CP011787.1 tRNAscan-SE exon 153406 153481 . + . ID=id9;Parent=rna6;anticodon=(pos:153440..153442);gbkey=tRNA;product=tRNA-Glu NZ_CP011787.1 RefSeq repeat_region 153478 156745 . + . ID=id10;gbkey=repeat_region NZ_CP011787.1 RefSeq gene 153600 156556 . + . ID=gene129;Name=AB162_RS00650;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB162_RS00650;old_locus_tag=AB162_135 NZ_CP011787.1 RefSeq rRNA 153600 156556 . + . ID=rna7;Parent=gene129;gbkey=rRNA;product=23S ribosomal RNA NZ_CP011787.1 RefSeq exon 153600 156556 . + . ID=id11;Parent=rna7;gbkey=rRNA;product=23S ribosomal RNA NZ_CP011787.1 RefSeq gene 156582 156698 . + . ID=gene130;Name=AB162_RS00655;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB162_RS00655;old_locus_tag=AB162_136 NZ_CP011787.1 cmsearch rRNA 156582 156698 . + . ID=rna8;Parent=gene130;gbkey=rRNA;product=5S ribosomal RNA NZ_CP011787.1 cmsearch exon 156582 156698 . + . ID=id12;Parent=rna8;gbkey=rRNA;product=5S ribosomal RNA NZ_CP011787.1 RefSeq gene 156734 156810 . + . ID=gene131;Name=AB162_RS00660;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00660;old_locus_tag=AB162_137 NZ_CP011787.1 tRNAscan-SE tRNA 156734 156810 . + . ID=rna9;Parent=gene131;anticodon=(pos:156768..156770);gbkey=tRNA;product=tRNA-Asp NZ_CP011787.1 tRNAscan-SE exon 156734 156810 . + . ID=id13;Parent=rna9;anticodon=(pos:156768..156770);gbkey=tRNA;product=tRNA-Asp NZ_CP011787.1 RefSeq gene 156866 156942 . + . ID=gene132;Name=AB162_RS00665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00665;old_locus_tag=AB162_138 NZ_CP011787.1 tRNAscan-SE tRNA 156866 156942 . + . ID=rna10;Parent=gene132;anticodon=(pos:156900..156902);gbkey=tRNA;product=tRNA-Trp NZ_CP011787.1 tRNAscan-SE exon 156866 156942 . + . ID=id14;Parent=rna10;anticodon=(pos:156900..156902);gbkey=tRNA;product=tRNA-Trp NZ_CP011787.1 RefSeq gene 156921 159041 . - . ID=gene133;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AB162_RS00670;old_locus_tag=AB162_139 NZ_CP011787.1 Protein Homology CDS 156921 159041 . - 0 ID=cds122;Parent=gene133;Dbxref=Genbank:WP_053097362.1;Name=WP_053097362.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycine--tRNA ligase;protein_id=WP_053097362.1;transl_table=11 NZ_CP011787.1 RefSeq gene 159038 159967 . - . ID=gene134;Name=AB162_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00675;old_locus_tag=AB162_140 NZ_CP011787.1 Protein Homology CDS 159038 159967 . - 0 ID=cds123;Parent=gene134;Dbxref=Genbank:WP_053096605.1;Name=WP_053096605.1;gbkey=CDS;product=glycyl-tRNA synthetase;protein_id=WP_053096605.1;transl_table=11 NZ_CP011787.1 RefSeq gene 160163 161278 . + . ID=gene135;Name=AB162_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00680;old_locus_tag=AB162_141 NZ_CP011787.1 Protein Homology CDS 160163 161278 . + 0 ID=cds124;Parent=gene135;Dbxref=Genbank:WP_053096607.1;Name=WP_053096607.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;product=tRNA (uracil-5-)-methyltransferase;protein_id=WP_053096607.1;transl_table=11 NZ_CP011787.1 RefSeq gene 161811 162029 . - . ID=gene136;Name=AB162_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00685;old_locus_tag=AB162_142 NZ_CP011787.1 Protein Homology CDS 161811 162029 . - 0 ID=cds125;Parent=gene136;Dbxref=Genbank:WP_053096610.1;Name=WP_053096610.1;gbkey=CDS;product=50S ribosomal protein L31;protein_id=WP_053096610.1;transl_table=11 NZ_CP011787.1 RefSeq gene 162132 164333 . + . ID=gene137;Name=AB162_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00690;old_locus_tag=AB162_143 NZ_CP011787.1 Protein Homology CDS 162132 164333 . + 0 ID=cds126;Parent=gene137;Dbxref=Genbank:WP_053096612.1;Name=WP_053096612.1;Note=binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity;gbkey=CDS;product=primosome assembly protein PriA;protein_id=WP_053096612.1;transl_table=11 NZ_CP011787.1 RefSeq gene 164377 164640 . + . ID=gene138;Name=AB162_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00695;old_locus_tag=AB162_144 NZ_CP011787.1 GeneMarkS+ CDS 164377 164640 . + 0 ID=cds127;Parent=gene138;Dbxref=Genbank:WP_053096614.1;Name=WP_053096614.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096614.1;transl_table=11 NZ_CP011787.1 RefSeq gene 164900 165442 . + . ID=gene139;Name=AB162_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00700;old_locus_tag=AB162_145 NZ_CP011787.1 Protein Homology CDS 164900 165442 . + 0 ID=cds128;Parent=gene139;Dbxref=Genbank:WP_053096616.1;Name=WP_053096616.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;product=ATP-dependent protease subunit HslV;protein_id=WP_053096616.1;transl_table=11 NZ_CP011787.1 RefSeq gene 165446 166771 . + . ID=gene140;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AB162_RS00705;old_locus_tag=AB162_146 NZ_CP011787.1 Protein Homology CDS 165446 166771 . + 0 ID=cds129;Parent=gene140;Dbxref=Genbank:WP_053096618.1;Name=WP_053096618.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=WP_053096618.1;transl_table=11 NZ_CP011787.1 RefSeq gene 167149 167925 . + . ID=gene141;Name=AB162_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00710;old_locus_tag=AB162_147 NZ_CP011787.1 Protein Homology CDS 167149 167925 . + 0 ID=cds130;Parent=gene141;Dbxref=Genbank:WP_053096620.1;Name=WP_053096620.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;product=triosephosphate isomerase;protein_id=WP_053096620.1;transl_table=11 NZ_CP011787.1 RefSeq gene 167943 168905 . - . ID=gene142;Name=AB162_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00715;old_locus_tag=AB162_148 NZ_CP011787.1 Protein Homology CDS 167943 168905 . - 0 ID=cds131;Parent=gene142;Dbxref=Genbank:WP_053096623.1;Name=WP_053096623.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;product=6-phosphofructokinase;protein_id=WP_053096623.1;transl_table=11 NZ_CP011787.1 RefSeq gene 169200 170216 . - . ID=gene143;Name=AB162_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00720;old_locus_tag=AB162_149 NZ_CP011787.1 Protein Homology CDS 169200 170216 . - 0 ID=cds132;Parent=gene143;Dbxref=Genbank:WP_053096625.1;Name=WP_053096625.1;gbkey=CDS;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_053096625.1;transl_table=11 NZ_CP011787.1 RefSeq gene 170530 170949 . - . ID=gene144;Name=AB162_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00725;old_locus_tag=AB162_151 NZ_CP011787.1 Protein Homology CDS 170530 170949 . - 0 ID=cds133;Parent=gene144;Dbxref=Genbank:WP_053096627.1;Name=WP_053096627.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096627.1;transl_table=11 NZ_CP011787.1 RefSeq gene 171273 171761 . + . ID=gene145;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AB162_RS00730;old_locus_tag=AB162_153 NZ_CP011787.1 Protein Homology CDS 171273 171761 . + 0 ID=cds134;Parent=gene145;Dbxref=Genbank:WP_053096629.1;Name=WP_053096629.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=WP_053096629.1;transl_table=11 NZ_CP011787.1 RefSeq gene 172433 172600 . - . ID=gene146;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AB162_RS00735;old_locus_tag=AB162_155 NZ_CP011787.1 Protein Homology CDS 172433 172600 . - 0 ID=cds135;Parent=gene146;Dbxref=Genbank:WP_053096631.1;Name=WP_053096631.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=WP_053096631.1;transl_table=11 NZ_CP011787.1 RefSeq gene 172626 172844 . - . ID=gene147;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AB162_RS00740;old_locus_tag=AB162_156 NZ_CP011787.1 Protein Homology CDS 172626 172844 . - 0 ID=cds136;Parent=gene147;Dbxref=Genbank:WP_053096633.1;Name=WP_053096633.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=WP_053096633.1;transl_table=11 NZ_CP011787.1 RefSeq gene 172926 173798 . - . ID=gene148;Name=AB162_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00745;old_locus_tag=AB162_157 NZ_CP011787.1 Protein Homology CDS 172926 173798 . - 0 ID=cds137;Parent=gene148;Dbxref=Genbank:WP_053096635.1;Name=WP_053096635.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096635.1;transl_table=11 NZ_CP011787.1 RefSeq gene 173960 174604 . + . ID=gene149;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AB162_RS00750;old_locus_tag=AB162_158 NZ_CP011787.1 Protein Homology CDS 173960 174604 . + 0 ID=cds138;Parent=gene149;Dbxref=Genbank:WP_053096637.1;Name=WP_053096637.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=WP_053096637.1;transl_table=11 NZ_CP011787.1 RefSeq gene 174612 175073 . - . ID=gene150;Name=AB162_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00755;old_locus_tag=AB162_159 NZ_CP011787.1 Protein Homology CDS 174612 175073 . - 0 ID=cds139;Parent=gene150;Dbxref=Genbank:WP_053096639.1;Name=WP_053096639.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=WP_053096639.1;transl_table=11 NZ_CP011787.1 RefSeq gene 175600 175779 . + . ID=gene151;Name=AB162_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00760;old_locus_tag=AB162_161 NZ_CP011787.1 GeneMarkS+ CDS 175600 175779 . + 0 ID=cds140;Parent=gene151;Dbxref=Genbank:WP_053096641.1;Name=WP_053096641.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096641.1;transl_table=11 NZ_CP011787.1 RefSeq gene 175867 175943 . - . ID=gene152;Name=AB162_RS00765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00765;old_locus_tag=AB162_162 NZ_CP011787.1 tRNAscan-SE tRNA 175867 175943 . - . ID=rna11;Parent=gene152;anticodon=(pos:complement(175907..175909));gbkey=tRNA;product=tRNA-Pro NZ_CP011787.1 tRNAscan-SE exon 175867 175943 . - . ID=id15;Parent=rna11;anticodon=(pos:complement(175907..175909));gbkey=tRNA;product=tRNA-Pro NZ_CP011787.1 RefSeq gene 175967 176052 . - . ID=gene153;Name=AB162_RS00770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00770;old_locus_tag=AB162_163 NZ_CP011787.1 tRNAscan-SE tRNA 175967 176052 . - . ID=rna12;Parent=gene153;anticodon=(pos:complement(176016..176018));gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 tRNAscan-SE exon 175967 176052 . - . ID=id16;Parent=rna12;anticodon=(pos:complement(176016..176018));gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 RefSeq gene 176074 176149 . - . ID=gene154;Name=AB162_RS00775;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00775;old_locus_tag=AB162_164 NZ_CP011787.1 tRNAscan-SE tRNA 176074 176149 . - . ID=rna13;Parent=gene154;anticodon=(pos:complement(176114..176116));gbkey=tRNA;product=tRNA-His NZ_CP011787.1 tRNAscan-SE exon 176074 176149 . - . ID=id17;Parent=rna13;anticodon=(pos:complement(176114..176116));gbkey=tRNA;product=tRNA-His NZ_CP011787.1 RefSeq gene 176222 176299 . - . ID=gene155;Name=AB162_RS00780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00780;old_locus_tag=AB162_165 NZ_CP011787.1 tRNAscan-SE tRNA 176222 176299 . - . ID=rna14;Parent=gene155;anticodon=(pos:complement(176262..176264));gbkey=tRNA;product=tRNA-Arg NZ_CP011787.1 tRNAscan-SE exon 176222 176299 . - . ID=id18;Parent=rna14;anticodon=(pos:complement(176262..176264));gbkey=tRNA;product=tRNA-Arg NZ_CP011787.1 RefSeq gene 176511 177770 . - . ID=gene156;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AB162_RS00785;old_locus_tag=AB162_166 NZ_CP011787.1 Protein Homology CDS 176511 177770 . - 0 ID=cds141;Parent=gene156;Dbxref=Genbank:WP_053096643.1;Name=WP_053096643.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=WP_053096643.1;transl_table=11 NZ_CP011787.1 RefSeq gene 177982 178320 . - . ID=gene157;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AB162_RS00790;old_locus_tag=AB162_167 NZ_CP011787.1 Protein Homology CDS 177982 178320 . - 0 ID=cds142;Parent=gene157;Dbxref=Genbank:WP_053096645.1;Name=WP_053096645.1;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=WP_053096645.1;transl_table=11 NZ_CP011787.1 RefSeq gene 178950 179713 . - . ID=gene158;Name=AB162_RS00795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS00795;old_locus_tag=AB162_168;pseudo=true NZ_CP011787.1 Protein Homology CDS 178950 179713 . - 0 ID=cds143;Parent=gene158;exception=annotated by transcript or proteomic data;gbkey=CDS;product=membrane biogenesis protein;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 179805 180776 . + . ID=gene159;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AB162_RS00800;old_locus_tag=AB162_169 NZ_CP011787.1 Protein Homology CDS 179805 180776 . + 0 ID=cds144;Parent=gene159;Dbxref=Genbank:WP_053096646.1;Name=WP_053096646.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;product=23S rRNA pseudouridylate synthase;protein_id=WP_053096646.1;transl_table=11 NZ_CP011787.1 RefSeq gene 180850 183432 . + . ID=gene160;Name=AB162_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00805;old_locus_tag=AB162_170 NZ_CP011787.1 Protein Homology CDS 180850 183432 . + 0 ID=cds145;Parent=gene160;Dbxref=Genbank:WP_053096647.1;Name=WP_053096647.1;gbkey=CDS;product=Clp protease ClpB;protein_id=WP_053096647.1;transl_table=11 NZ_CP011787.1 RefSeq gene 183435 183812 . - . ID=gene161;Name=AB162_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00810;old_locus_tag=AB162_171 NZ_CP011787.1 Protein Homology CDS 183435 183812 . - 0 ID=cds146;Parent=gene161;Dbxref=Genbank:WP_053097364.1;Name=WP_053097364.1;gbkey=CDS;product=50S ribosomal protein L19;protein_id=WP_053097364.1;transl_table=11 NZ_CP011787.1 RefSeq gene 183833 184585 . - . ID=gene162;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AB162_RS00815;old_locus_tag=AB162_172 NZ_CP011787.1 Protein Homology CDS 183833 184585 . - 0 ID=cds147;Parent=gene162;Dbxref=Genbank:WP_053096649.1;Name=WP_053096649.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine(37)-N(1))-methyltransferase;protein_id=WP_053096649.1;transl_table=11 NZ_CP011787.1 RefSeq gene 184613 185164 . - . ID=gene163;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AB162_RS00820;old_locus_tag=AB162_173 NZ_CP011787.1 Protein Homology CDS 184613 185164 . - 0 ID=cds148;Parent=gene163;Dbxref=Genbank:WP_053096651.1;Name=WP_053096651.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=16S rRNA-processing protein RimM;protein_id=WP_053096651.1;transl_table=11 NZ_CP011787.1 RefSeq gene 185172 185411 . - . ID=gene164;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AB162_RS00825;old_locus_tag=AB162_174 NZ_CP011787.1 Protein Homology CDS 185172 185411 . - 0 ID=cds149;Parent=gene164;Dbxref=Genbank:WP_053096654.1;Name=WP_053096654.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=WP_053096654.1;transl_table=11 NZ_CP011787.1 RefSeq gene 185511 186870 . - . ID=gene165;Name=AB162_RS00830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS00830;old_locus_tag=AB162_175;pseudo=true NZ_CP011787.1 Protein Homology CDS 185511 186870 . - 0 ID=cds150;Parent=gene165;exception=annotated by transcript or proteomic data;gbkey=CDS;product=signal recognition particle;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 186896 188476 . - . ID=gene166;Name=AB162_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00835;old_locus_tag=AB162_176 NZ_CP011787.1 Protein Homology CDS 186896 188476 . - 0 ID=cds151;Parent=gene166;Dbxref=Genbank:WP_053096656.1;Name=WP_053096656.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;product=glutamate--cysteine ligase;protein_id=WP_053096656.1;transl_table=11 NZ_CP011787.1 RefSeq gene 188623 188699 . - . ID=gene167;Name=AB162_RS00840;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00840;old_locus_tag=AB162_177 NZ_CP011787.1 tRNAscan-SE tRNA 188623 188699 . - . ID=rna15;Parent=gene167;anticodon=(pos:complement(188663..188665));gbkey=tRNA;product=tRNA-Arg NZ_CP011787.1 tRNAscan-SE exon 188623 188699 . - . ID=id19;Parent=rna15;anticodon=(pos:complement(188663..188665));gbkey=tRNA;product=tRNA-Arg NZ_CP011787.1 RefSeq gene 188717 188809 . - . ID=gene168;Name=AB162_RS00845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00845;old_locus_tag=AB162_178 NZ_CP011787.1 tRNAscan-SE tRNA 188717 188809 . - . ID=rna16;Parent=gene168;anticodon=(pos:complement(188773..188775));gbkey=tRNA;product=tRNA-Ser NZ_CP011787.1 tRNAscan-SE exon 188717 188809 . - . ID=id20;Parent=rna16;anticodon=(pos:complement(188773..188775));gbkey=tRNA;product=tRNA-Ser NZ_CP011787.1 RefSeq gene 189016 189207 . - . ID=gene169;Name=AB162_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00850;old_locus_tag=AB162_179 NZ_CP011787.1 Protein Homology CDS 189016 189207 . - 0 ID=cds152;Parent=gene169;Dbxref=Genbank:WP_053096658.1;Name=WP_053096658.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;product=carbon storage regulator;protein_id=WP_053096658.1;transl_table=11 NZ_CP011787.1 RefSeq gene 189391 192084 . - . ID=gene170;Name=AB162_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00855;old_locus_tag=AB162_180 NZ_CP011787.1 Protein Homology CDS 189391 192084 . - 0 ID=cds153;Parent=gene170;Dbxref=Genbank:WP_053097365.1;Name=WP_053097365.1;gbkey=CDS;product=alanyl-tRNA synthetase;protein_id=WP_053097365.1;transl_table=11 NZ_CP011787.1 RefSeq gene 192360 193420 . - . ID=gene171;Name=recA;gbkey=Gene;gene=recA;gene_biotype=pseudogene;locus_tag=AB162_RS00860;old_locus_tag=AB162_181;pseudo=true NZ_CP011787.1 Protein Homology CDS 192360 193420 . - 0 ID=cds154;Parent=gene171;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=recA;product=recombinase A;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 194894 197434 . + . ID=gene172;Name=AB162_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00865;old_locus_tag=AB162_182 NZ_CP011787.1 Protein Homology CDS 194894 197434 . + 0 ID=cds155;Parent=gene172;Dbxref=Genbank:WP_053097368.1;Name=WP_053097368.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;product=DNA mismatch repair protein MutS;protein_id=WP_053097368.1;transl_table=11 NZ_CP011787.1 RefSeq gene 197773 198249 . - . ID=gene173;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AB162_RS00870;old_locus_tag=AB162_183 NZ_CP011787.1 Protein Homology CDS 197773 198249 . - 0 ID=cds156;Parent=gene173;Dbxref=Genbank:WP_053096660.1;Name=WP_053096660.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_053096660.1;transl_table=11 NZ_CP011787.1 RefSeq gene 198261 198989 . - . ID=gene174;Name=AB162_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00875;old_locus_tag=AB162_184 NZ_CP011787.1 Protein Homology CDS 198261 198989 . - 0 ID=cds157;Parent=gene174;Dbxref=Genbank:WP_053096662.1;Name=WP_053096662.1;gbkey=CDS;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_053096662.1;transl_table=11 NZ_CP011787.1 RefSeq gene 199004 199279 . - . ID=gene175;Name=AB162_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00880;old_locus_tag=AB162_185 NZ_CP011787.1 Protein Homology CDS 199004 199279 . - 0 ID=cds158;Parent=gene175;Dbxref=Genbank:WP_053096665.1;Name=WP_053096665.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096665.1;transl_table=11 NZ_CP011787.1 RefSeq gene 200886 202181 . - . ID=gene176;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AB162_RS00885;old_locus_tag=AB162_186 NZ_CP011787.1 Protein Homology CDS 200886 202181 . - 0 ID=cds159;Parent=gene176;Dbxref=Genbank:WP_053096667.1;Name=WP_053096667.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=enolase;protein_id=WP_053096667.1;transl_table=11 NZ_CP011787.1 RefSeq gene 202213 203850 . - . ID=gene177;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AB162_RS00890;old_locus_tag=AB162_187 NZ_CP011787.1 Protein Homology CDS 202213 203850 . - 0 ID=cds160;Parent=gene177;Dbxref=Genbank:WP_053096668.1;Name=WP_053096668.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthetase;protein_id=WP_053096668.1;transl_table=11 NZ_CP011787.1 RefSeq gene 204636 205328 . + . ID=gene178;Name=AB162_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00895;old_locus_tag=AB162_188 NZ_CP011787.1 Protein Homology CDS 204636 205328 . + 0 ID=cds161;Parent=gene178;Dbxref=Genbank:WP_053096670.1;Name=WP_053096670.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;product=5'-methylthioadenosine nucleosidase;protein_id=WP_053096670.1;transl_table=11 NZ_CP011787.1 RefSeq gene 205359 205703 . - . ID=gene179;Name=AB162_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00900;old_locus_tag=AB162_189 NZ_CP011787.1 Protein Homology CDS 205359 205703 . - 0 ID=cds162;Parent=gene179;Dbxref=Genbank:WP_053096672.1;Name=WP_053096672.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_053096672.1;transl_table=11 NZ_CP011787.1 RefSeq gene 205839 208301 . - . ID=gene180;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=AB162_RS00905;old_locus_tag=AB162_190 NZ_CP011787.1 Protein Homology CDS 205839 208301 . - 0 ID=cds163;Parent=gene180;Dbxref=Genbank:WP_053096675.1;Name=WP_053096675.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_053096675.1;transl_table=11 NZ_CP011787.1 RefSeq gene 208639 209112 . + . ID=gene181;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=AB162_RS00910;old_locus_tag=AB162_191 NZ_CP011787.1 Protein Homology CDS 208639 209112 . + 0 ID=cds164;Parent=gene181;Dbxref=Genbank:WP_053096677.1;Name=WP_053096677.1;gbkey=CDS;gene=dksA;product=RNA polymerase-binding transcription factor;protein_id=WP_053096677.1;transl_table=11 NZ_CP011787.1 RefSeq gene 209265 210632 . + . ID=gene182;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=AB162_RS00915;old_locus_tag=AB162_192 NZ_CP011787.1 Protein Homology CDS 209265 210632 . + 0 ID=cds165;Parent=gene182;Dbxref=Genbank:WP_053096679.1;Name=WP_053096679.1;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase I;protein_id=WP_053096679.1;transl_table=11 NZ_CP011787.1 RefSeq gene 210645 211166 . + . ID=gene183;Name=AB162_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00920;old_locus_tag=AB162_193 NZ_CP011787.1 Protein Homology CDS 210645 211166 . + 0 ID=cds166;Parent=gene183;Dbxref=Genbank:WP_053096681.1;Name=WP_053096681.1;gbkey=CDS;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=WP_053096681.1;transl_table=11 NZ_CP011787.1 RefSeq gene 211234 213840 . + . ID=gene184;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AB162_RS00925;old_locus_tag=AB162_194 NZ_CP011787.1 Protein Homology CDS 211234 213840 . + 0 ID=cds167;Parent=gene184;Dbxref=Genbank:WP_053096683.1;Name=WP_053096683.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;product=leucine--tRNA ligase;protein_id=WP_053096683.1;transl_table=11 NZ_CP011787.1 RefSeq gene 213954 215015 . + . ID=gene185;Name=AB162_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00930;old_locus_tag=AB162_195 NZ_CP011787.1 Protein Homology CDS 213954 215015 . + 0 ID=cds168;Parent=gene185;Dbxref=Genbank:WP_053096685.1;Name=WP_053096685.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096685.1;transl_table=11 NZ_CP011787.1 RefSeq gene 215030 215674 . + . ID=gene186;Name=AB162_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00935;old_locus_tag=AB162_196 NZ_CP011787.1 Protein Homology CDS 215030 215674 . + 0 ID=cds169;Parent=gene186;Dbxref=Genbank:WP_053096687.1;Name=WP_053096687.1;gbkey=CDS;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_053096687.1;transl_table=11 NZ_CP011787.1 RefSeq gene 215987 216577 . + . ID=gene187;Name=AB162_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00940;old_locus_tag=AB162_197 NZ_CP011787.1 Protein Homology CDS 215987 216577 . + 0 ID=cds170;Parent=gene187;Dbxref=Genbank:WP_053096689.1;Name=WP_053096689.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;product=lipoate--protein ligase;protein_id=WP_053096689.1;transl_table=11 NZ_CP011787.1 RefSeq gene 216673 217596 . + . ID=gene188;Name=AB162_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00945;old_locus_tag=AB162_198 NZ_CP011787.1 Protein Homology CDS 216673 217596 . + 0 ID=cds171;Parent=gene188;Dbxref=Genbank:WP_053096691.1;Name=WP_053096691.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;product=lipoyl synthase;protein_id=WP_053096691.1;transl_table=11 NZ_CP011787.1 RefSeq gene 217883 219109 . + . ID=gene189;Name=AB162_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00950;old_locus_tag=AB162_199 NZ_CP011787.1 Protein Homology CDS 217883 219109 . + 0 ID=cds172;Parent=gene189;Dbxref=Genbank:WP_053096693.1;Name=WP_053096693.1;Note=Confers resistance to norfloxacin and enoxacin;gbkey=CDS;product=multidrug resistance protein MdtH;protein_id=WP_053096693.1;transl_table=11 NZ_CP011787.1 RefSeq gene 219229 219777 . + . ID=gene190;Name=AB162_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00955;old_locus_tag=AB162_200 NZ_CP011787.1 Protein Homology CDS 219229 219777 . + 0 ID=cds173;Parent=gene190;Dbxref=Genbank:WP_053096695.1;Name=WP_053096695.1;gbkey=CDS;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_053096695.1;transl_table=11 NZ_CP011787.1 RefSeq gene 219840 219914 . + . ID=gene191;Name=AB162_RS00960;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00960;old_locus_tag=AB162_201 NZ_CP011787.1 tRNAscan-SE tRNA 219840 219914 . + . ID=rna17;Parent=gene191;anticodon=(pos:219872..219874);gbkey=tRNA;product=tRNA-Gly NZ_CP011787.1 tRNAscan-SE exon 219840 219914 . + . ID=id21;Parent=rna17;anticodon=(pos:219872..219874);gbkey=tRNA;product=tRNA-Gly NZ_CP011787.1 RefSeq gene 220021 220091 . + . ID=gene192;Name=AB162_RS00965;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00965;old_locus_tag=AB162_202 NZ_CP011787.1 tRNAscan-SE tRNA 220021 220091 . + . ID=rna18;Parent=gene192;anticodon=(pos:220053..220055);gbkey=tRNA;product=tRNA-Cys NZ_CP011787.1 tRNAscan-SE exon 220021 220091 . + . ID=id22;Parent=rna18;anticodon=(pos:220053..220055);gbkey=tRNA;product=tRNA-Cys NZ_CP011787.1 RefSeq gene 220124 220209 . + . ID=gene193;Name=AB162_RS00970;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS00970;old_locus_tag=AB162_203 NZ_CP011787.1 tRNAscan-SE tRNA 220124 220209 . + . ID=rna19;Parent=gene193;anticodon=(pos:220158..220160);gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 tRNAscan-SE exon 220124 220209 . + . ID=id23;Parent=rna19;anticodon=(pos:220158..220160);gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 RefSeq gene 220419 221417 . + . ID=gene194;Name=AB162_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00975;old_locus_tag=AB162_204 NZ_CP011787.1 Protein Homology CDS 220419 221417 . + 0 ID=cds174;Parent=gene194;Dbxref=Genbank:WP_053096697.1;Name=WP_053096697.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;product=6-phosphogluconolactonase;protein_id=WP_053096697.1;transl_table=11 NZ_CP011787.1 RefSeq gene 222091 222789 . + . ID=gene195;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AB162_RS00980;old_locus_tag=AB162_205 NZ_CP011787.1 Protein Homology CDS 222091 222789 . + 0 ID=cds175;Parent=gene195;Dbxref=Genbank:WP_053096698.1;Name=WP_053096698.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;product=phosphoglyceromutase;protein_id=WP_053096698.1;transl_table=11 NZ_CP011787.1 RefSeq gene 223246 223926 . + . ID=gene196;Name=AB162_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00985;old_locus_tag=AB162_207 NZ_CP011787.1 Protein Homology CDS 223246 223926 . + 0 ID=cds176;Parent=gene196;Dbxref=Genbank:WP_053096701.1;Name=WP_053096701.1;gbkey=CDS;product=cytidylate kinase;protein_id=WP_053096701.1;transl_table=11 NZ_CP011787.1 RefSeq gene 224053 225744 . + . ID=gene197;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AB162_RS00990;old_locus_tag=AB162_208 NZ_CP011787.1 Protein Homology CDS 224053 225744 . + 0 ID=cds177;Parent=gene197;Dbxref=Genbank:WP_053096703.1;Name=WP_053096703.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=WP_053096703.1;transl_table=11 NZ_CP011787.1 RefSeq gene 226049 226684 . - . ID=gene198;Name=AB162_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS00995;old_locus_tag=AB162_210 NZ_CP011787.1 Protein Homology CDS 226049 226684 . - 0 ID=cds178;Parent=gene198;Dbxref=Genbank:WP_053096705.1;Name=WP_053096705.1;gbkey=CDS;product=protein disulfide isomerase;protein_id=WP_053096705.1;transl_table=11 NZ_CP011787.1 RefSeq gene 227148 228089 . + . ID=gene199;Name=AB162_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01000;old_locus_tag=AB162_211 NZ_CP011787.1 Protein Homology CDS 227148 228089 . + 0 ID=cds179;Parent=gene199;Dbxref=Genbank:WP_053096707.1;Name=WP_053096707.1;gbkey=CDS;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_053096707.1;transl_table=11 NZ_CP011787.1 RefSeq gene 228117 228602 . + . ID=gene200;Name=AB162_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01005;old_locus_tag=AB162_212 NZ_CP011787.1 Protein Homology CDS 228117 228602 . + 0 ID=cds180;Parent=gene200;Dbxref=Genbank:WP_053097370.1;Name=WP_053097370.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_053097370.1;transl_table=11 NZ_CP011787.1 RefSeq gene 228990 229199 . - . ID=gene201;Name=AB162_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01010;old_locus_tag=AB162_213 NZ_CP011787.1 Protein Homology CDS 228990 229199 . - 0 ID=cds181;Parent=gene201;Dbxref=Genbank:WP_025244663.1;Name=WP_025244663.1;gbkey=CDS;product=cold-shock protein;protein_id=WP_025244663.1;transl_table=11 NZ_CP011787.1 RefSeq gene 229708 232056 . - . ID=gene202;Name=AB162_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01015;old_locus_tag=AB162_214 NZ_CP011787.1 Protein Homology CDS 229708 232056 . - 0 ID=cds182;Parent=gene202;Dbxref=Genbank:WP_053096709.1;Name=WP_053096709.1;gbkey=CDS;product=DNA-binding protein;protein_id=WP_053096709.1;transl_table=11 NZ_CP011787.1 RefSeq gene 232250 233518 . - . ID=gene203;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AB162_RS01020;old_locus_tag=AB162_215 NZ_CP011787.1 Protein Homology CDS 232250 233518 . - 0 ID=cds183;Parent=gene203;Dbxref=Genbank:WP_053096711.1;Name=WP_053096711.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=Clp protease ClpX;protein_id=WP_053096711.1;transl_table=11 NZ_CP011787.1 RefSeq gene 233641 234300 . - . ID=gene204;Name=AB162_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01025;old_locus_tag=AB162_216 NZ_CP011787.1 Protein Homology CDS 233641 234300 . - 0 ID=cds184;Parent=gene204;Dbxref=Genbank:WP_053096713.1;Name=WP_053096713.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096713.1;transl_table=11 NZ_CP011787.1 RefSeq gene 234737 235633 . + . ID=gene205;Name=AB162_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01030;old_locus_tag=AB162_217 NZ_CP011787.1 Protein Homology CDS 234737 235633 . + 0 ID=cds185;Parent=gene205;Dbxref=Genbank:WP_053096715.1;Name=WP_053096715.1;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_053096715.1;transl_table=11 NZ_CP011787.1 RefSeq gene 235638 237611 . + . ID=gene206;Name=AB162_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01035;old_locus_tag=AB162_218 NZ_CP011787.1 Protein Homology CDS 235638 237611 . + 0 ID=cds186;Parent=gene206;Dbxref=Genbank:WP_053096717.1;Name=WP_053096717.1;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_053096717.1;transl_table=11 NZ_CP011787.1 RefSeq gene 237589 238212 . + . ID=gene207;Name=AB162_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01040;old_locus_tag=AB162_219 NZ_CP011787.1 Protein Homology CDS 237589 238212 . + 0 ID=cds187;Parent=gene207;Dbxref=Genbank:WP_053096719.1;Name=WP_053096719.1;gbkey=CDS;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_053096719.1;transl_table=11 NZ_CP011787.1 RefSeq gene 238212 238532 . + . ID=gene208;Name=AB162_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01045 NZ_CP011787.1 Protein Homology CDS 238212 238532 . + 0 ID=cds188;Parent=gene208;Dbxref=Genbank:WP_053096721.1;Name=WP_053096721.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096721.1;transl_table=11 NZ_CP011787.1 RefSeq gene 238559 239416 . + . ID=gene209;Name=AB162_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01050;old_locus_tag=AB162_220 NZ_CP011787.1 Protein Homology CDS 238559 239416 . + 0 ID=cds189;Parent=gene209;Dbxref=Genbank:WP_053096723.1;Name=WP_053096723.1;Note=converts protoheme IX and farnesyl diphosphate to heme O;gbkey=CDS;product=protoheme IX farnesyltransferase;protein_id=WP_053096723.1;transl_table=11 NZ_CP011787.1 RefSeq gene 239472 240845 . + . ID=gene210;Name=AB162_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01055;old_locus_tag=AB162_221 NZ_CP011787.1 Protein Homology CDS 239472 240845 . + 0 ID=cds190;Parent=gene210;Dbxref=Genbank:WP_053096725.1;Name=WP_053096725.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096725.1;transl_table=11 NZ_CP011787.1 RefSeq gene 241382 242275 . + . ID=gene211;Name=AB162_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01060;old_locus_tag=AB162_222 NZ_CP011787.1 Protein Homology CDS 241382 242275 . + 0 ID=cds191;Parent=gene211;Dbxref=Genbank:WP_053096726.1;Name=WP_053096726.1;gbkey=CDS;product=geranyl transferase;protein_id=WP_053096726.1;transl_table=11 NZ_CP011787.1 RefSeq gene 242311 244176 . + . ID=gene212;Name=AB162_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01065;old_locus_tag=AB162_223 NZ_CP011787.1 Protein Homology CDS 242311 244176 . + 0 ID=cds192;Parent=gene212;Dbxref=Genbank:WP_053096728.1;Name=WP_053096728.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_053096728.1;transl_table=11 NZ_CP011787.1 RefSeq gene 244239 245984 . + . ID=gene213;Name=AB162_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01070;old_locus_tag=AB162_224 NZ_CP011787.1 Protein Homology CDS 244239 245984 . + 0 ID=cds193;Parent=gene213;Dbxref=Genbank:WP_053096730.1;Name=WP_053096730.1;gbkey=CDS;product=arginyl-tRNA synthetase;protein_id=WP_053096730.1;transl_table=11 NZ_CP011787.1 RefSeq gene 246004 247533 . - . ID=gene214;Name=AB162_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01075;old_locus_tag=AB162_225 NZ_CP011787.1 Protein Homology CDS 246004 247533 . - 0 ID=cds194;Parent=gene214;Dbxref=Genbank:WP_053096731.1;Name=WP_053096731.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096731.1;transl_table=11 NZ_CP011787.1 RefSeq gene 247624 248004 . - . ID=gene215;Name=AB162_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01080;old_locus_tag=AB162_226 NZ_CP011787.1 Protein Homology CDS 247624 248004 . - 0 ID=cds195;Parent=gene215;Dbxref=Genbank:WP_053096733.1;Name=WP_053096733.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096733.1;transl_table=11 NZ_CP011787.1 RefSeq gene 248199 249119 . - . ID=gene216;Name=AB162_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01085;old_locus_tag=AB162_227 NZ_CP011787.1 Protein Homology CDS 248199 249119 . - 0 ID=cds196;Parent=gene216;Dbxref=Genbank:WP_053096734.1;Name=WP_053096734.1;gbkey=CDS;product=GTPase Era;protein_id=WP_053096734.1;transl_table=11 NZ_CP011787.1 RefSeq gene 249109 249807 . - . ID=gene217;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AB162_RS01090;old_locus_tag=AB162_228 NZ_CP011787.1 Protein Homology CDS 249109 249807 . - 0 ID=cds197;Parent=gene217;Dbxref=Genbank:WP_053096736.1;Name=WP_053096736.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=WP_053096736.1;transl_table=11 NZ_CP011787.1 RefSeq gene 249840 250784 . - . ID=gene218;Name=AB162_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01095;old_locus_tag=AB162_229 NZ_CP011787.1 Protein Homology CDS 249840 250784 . - 0 ID=cds198;Parent=gene218;Dbxref=Genbank:WP_053097372.1;Name=WP_053097372.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;product=signal peptidase I;protein_id=WP_053097372.1;transl_table=11 NZ_CP011787.1 RefSeq gene 250828 252624 . - . ID=gene219;Name=AB162_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01100;old_locus_tag=AB162_230 NZ_CP011787.1 Protein Homology CDS 250828 252624 . - 0 ID=cds199;Parent=gene219;Dbxref=Genbank:WP_053096738.1;Name=WP_053096738.1;gbkey=CDS;product=elongation factor 4;protein_id=WP_053096738.1;transl_table=11 NZ_CP011787.1 RefSeq gene 252759 252834 . + . ID=gene220;Name=AB162_RS01105;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01105;old_locus_tag=AB162_231 NZ_CP011787.1 tRNAscan-SE tRNA 252759 252834 . + . ID=rna20;Parent=gene220;anticodon=(pos:252792..252794);gbkey=tRNA;product=tRNA-Thr NZ_CP011787.1 tRNAscan-SE exon 252759 252834 . + . ID=id24;Parent=rna20;anticodon=(pos:252792..252794);gbkey=tRNA;product=tRNA-Thr NZ_CP011787.1 RefSeq gene 252874 255741 . - . ID=gene221;Name=AB162_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01110;old_locus_tag=AB162_232 NZ_CP011787.1 Protein Homology CDS 252874 255741 . - 0 ID=cds200;Parent=gene221;Dbxref=Genbank:WP_053096740.1;Name=WP_053096740.1;gbkey=CDS;product=valine--tRNA ligase;protein_id=WP_053096740.1;transl_table=11 NZ_CP011787.1 RefSeq gene 255773 256216 . - . ID=gene222;Name=AB162_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01115;old_locus_tag=AB162_233 NZ_CP011787.1 Protein Homology CDS 255773 256216 . - 0 ID=cds201;Parent=gene222;Dbxref=Genbank:WP_053096742.1;Name=WP_053096742.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;product=DNA polymerase III subunit chi;protein_id=WP_053096742.1;transl_table=11 NZ_CP011787.1 RefSeq gene 256261 257790 . - . ID=gene223;Name=AB162_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01120;old_locus_tag=AB162_234 NZ_CP011787.1 Protein Homology CDS 256261 257790 . - 0 ID=cds202;Parent=gene223;Dbxref=Genbank:WP_053096744.1;Name=WP_053096744.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;product=aminopeptidase;protein_id=WP_053096744.1;transl_table=11 NZ_CP011787.1 RefSeq gene 257984 258808 . + . ID=gene224;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=AB162_RS01125;old_locus_tag=AB162_235 NZ_CP011787.1 Protein Homology CDS 257984 258808 . + 0 ID=cds203;Parent=gene224;Dbxref=Genbank:WP_053097374.1;Name=WP_053097374.1;Note=catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;product=NAD synthetase;protein_id=WP_053097374.1;transl_table=11 NZ_CP011787.1 RefSeq gene 258819 259658 . - . ID=gene225;Name=AB162_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01130;old_locus_tag=AB162_236 NZ_CP011787.1 Protein Homology CDS 258819 259658 . - 0 ID=cds204;Parent=gene225;Dbxref=Genbank:WP_053097376.1;Name=WP_053097376.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=WP_053097376.1;transl_table=11 NZ_CP011787.1 RefSeq gene 259658 260746 . - . ID=gene226;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AB162_RS01135;old_locus_tag=AB162_237 NZ_CP011787.1 Protein Homology CDS 259658 260746 . - 0 ID=cds205;Parent=gene226;Dbxref=Genbank:WP_053096746.1;Name=WP_053096746.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=WP_053096746.1;transl_table=11 NZ_CP011787.1 RefSeq gene 260943 261566 . + . ID=gene227;Name=AB162_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01140;old_locus_tag=AB162_238 NZ_CP011787.1 Protein Homology CDS 260943 261566 . + 0 ID=cds206;Parent=gene227;Dbxref=Genbank:WP_053096748.1;Name=WP_053096748.1;gbkey=CDS;product=outer membrane lipoprotein LolB;protein_id=WP_053096748.1;transl_table=11 NZ_CP011787.1 RefSeq gene 261566 262435 . + . ID=gene228;Name=AB162_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01145;old_locus_tag=AB162_239 NZ_CP011787.1 Protein Homology CDS 261566 262435 . + 0 ID=cds207;Parent=gene228;Dbxref=Genbank:WP_053096750.1;Name=WP_053096750.1;gbkey=CDS;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_053096750.1;transl_table=11 NZ_CP011787.1 RefSeq gene 262500 263447 . + . ID=gene229;Name=AB162_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01150;old_locus_tag=AB162_240 NZ_CP011787.1 Protein Homology CDS 262500 263447 . + 0 ID=cds208;Parent=gene229;Dbxref=Genbank:WP_053096752.1;Name=WP_053096752.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;product=ribose-phosphate pyrophosphokinase;protein_id=WP_053096752.1;transl_table=11 NZ_CP011787.1 RefSeq gene 263511 264089 . + . ID=gene230;Name=AB162_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01155;old_locus_tag=AB162_241 NZ_CP011787.1 Protein Homology CDS 263511 264089 . + 0 ID=cds209;Parent=gene230;Dbxref=Genbank:WP_053096754.1;Name=WP_053096754.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;product=peptidyl-tRNA hydrolase;protein_id=WP_053096754.1;transl_table=11 NZ_CP011787.1 RefSeq gene 264127 265212 . + . ID=gene231;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AB162_RS01160;old_locus_tag=AB162_242 NZ_CP011787.1 Protein Homology CDS 264127 265212 . + 0 ID=cds210;Parent=gene231;Dbxref=Genbank:WP_053096756.1;Name=WP_053096756.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-binding protein;protein_id=WP_053096756.1;transl_table=11 NZ_CP011787.1 RefSeq gene 265261 266040 . + . ID=gene232;Name=AB162_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01165;old_locus_tag=AB162_243 NZ_CP011787.1 Protein Homology CDS 265261 266040 . + 0 ID=cds211;Parent=gene232;Dbxref=Genbank:WP_053096758.1;Name=WP_053096758.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;product=enoyl-ACP reductase;protein_id=WP_053096758.1;transl_table=11 NZ_CP011787.1 RefSeq gene 266128 268070 . + . ID=gene233;Name=AB162_RS01170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS01170;old_locus_tag=AB162_244;pseudo=true NZ_CP011787.1 Protein Homology CDS 266128 268070 . + 0 ID=cds212;Parent=gene233;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;exception=annotated by transcript or proteomic data;gbkey=CDS;product=exoribonuclease II;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 268072 268812 . - . ID=gene234;Name=AB162_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01175;old_locus_tag=AB162_245 NZ_CP011787.1 Protein Homology CDS 268072 268812 . - 0 ID=cds213;Parent=gene234;Dbxref=Genbank:WP_053096760.1;Name=WP_053096760.1;gbkey=CDS;product=orotidine 5'-phosphate decarboxylase;protein_id=WP_053096760.1;transl_table=11 NZ_CP011787.1 RefSeq gene 269506 270093 . + . ID=gene235;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=AB162_RS01180;old_locus_tag=AB162_247 NZ_CP011787.1 Protein Homology CDS 269506 270093 . + 0 ID=cds214;Parent=gene235;Dbxref=Genbank:WP_053096762.1;Name=WP_053096762.1;Note=catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase;protein_id=WP_053096762.1;transl_table=11 NZ_CP011787.1 RefSeq gene 270719 273304 . - . ID=gene236;Name=AB162_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01185;old_locus_tag=AB162_248 NZ_CP011787.1 Protein Homology CDS 270719 273304 . - 0 ID=cds215;Parent=gene236;Dbxref=Genbank:WP_053096764.1;Name=WP_053096764.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;product=DNA topoisomerase I;protein_id=WP_053096764.1;transl_table=11 NZ_CP011787.1 RefSeq gene 273819 275279 . + . ID=gene237;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AB162_RS01190;old_locus_tag=AB162_249 NZ_CP011787.1 Protein Homology CDS 273819 275279 . + 0 ID=cds216;Parent=gene237;Dbxref=Genbank:WP_053096766.1;Name=WP_053096766.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthetase;protein_id=WP_053096766.1;transl_table=11 NZ_CP011787.1 RefSeq gene 275598 276017 . + . ID=gene238;Name=AB162_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01195;old_locus_tag=AB162_250 NZ_CP011787.1 Protein Homology CDS 275598 276017 . + 0 ID=cds217;Parent=gene238;Dbxref=Genbank:WP_053096768.1;Name=WP_053096768.1;gbkey=CDS;product=transcriptional regulator;protein_id=WP_053096768.1;transl_table=11 NZ_CP011787.1 RefSeq gene 276204 277082 . - . ID=gene239;Name=AB162_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01200;old_locus_tag=AB162_251 NZ_CP011787.1 Protein Homology CDS 276204 277082 . - 0 ID=cds218;Parent=gene239;Dbxref=Genbank:WP_053096770.1;Name=WP_053096770.1;Note=metalloprotease;gbkey=CDS;product=heat-shock protein HtpX;protein_id=WP_053096770.1;transl_table=11 NZ_CP011787.1 RefSeq gene 277203 277691 . - . ID=gene240;Name=AB162_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01205;old_locus_tag=AB162_252 NZ_CP011787.1 Protein Homology CDS 277203 277691 . - 0 ID=cds219;Parent=gene240;Dbxref=Genbank:WP_053096772.1;Name=WP_053096772.1;Note=cytoplasmic iron storage protein;gbkey=CDS;product=ferritin;protein_id=WP_053096772.1;transl_table=11 NZ_CP011787.1 RefSeq gene 277806 279272 . - . ID=gene241;Name=AB162_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01210;old_locus_tag=AB162_253 NZ_CP011787.1 Protein Homology CDS 277806 279272 . - 0 ID=cds220;Parent=gene241;Dbxref=Genbank:WP_053096774.1;Name=WP_053096774.1;Note=catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate;gbkey=CDS;product=glucose-6-phosphate dehydrogenase;protein_id=WP_053096774.1;transl_table=11 NZ_CP011787.1 RefSeq gene 279577 281022 . + . ID=gene242;Name=AB162_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01215;old_locus_tag=AB162_254 NZ_CP011787.1 Protein Homology CDS 279577 281022 . + 0 ID=cds221;Parent=gene242;Dbxref=Genbank:WP_053096777.1;Name=WP_053096777.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;product=pyruvate kinase;protein_id=WP_053096777.1;transl_table=11 NZ_CP011787.1 RefSeq gene 281307 282662 . + . ID=gene243;Name=AB162_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01220;old_locus_tag=AB162_256 NZ_CP011787.1 Protein Homology CDS 281307 282662 . + 0 ID=cds222;Parent=gene243;Dbxref=Genbank:WP_053096779.1;Name=WP_053096779.1;gbkey=CDS;product=manganese transporter;protein_id=WP_053096779.1;transl_table=11 NZ_CP011787.1 RefSeq gene 282714 283724 . - . ID=gene244;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AB162_RS01225;old_locus_tag=AB162_257 NZ_CP011787.1 Protein Homology CDS 282714 283724 . - 0 ID=cds223;Parent=gene244;Dbxref=Genbank:WP_053096781.1;Name=WP_053096781.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=ATP-dependent DNA helicase RuvB;protein_id=WP_053096781.1;transl_table=11 NZ_CP011787.1 RefSeq gene 283721 284335 . - . ID=gene245;Name=AB162_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01230;old_locus_tag=AB162_258 NZ_CP011787.1 Protein Homology CDS 283721 284335 . - 0 ID=cds224;Parent=gene245;Dbxref=Genbank:WP_053096783.1;Name=WP_053096783.1;gbkey=CDS;product=Holliday junction DNA helicase RuvA;protein_id=WP_053096783.1;transl_table=11 NZ_CP011787.1 RefSeq gene 284436 284924 . - . ID=gene246;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AB162_RS01235;old_locus_tag=AB162_259 NZ_CP011787.1 Protein Homology CDS 284436 284924 . - 0 ID=cds225;Parent=gene246;Dbxref=Genbank:WP_053096785.1;Name=WP_053096785.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=Holliday junction resolvase;protein_id=WP_053096785.1;transl_table=11 NZ_CP011787.1 RefSeq gene 285672 287453 . - . ID=gene247;Name=AB162_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01240;old_locus_tag=AB162_260 NZ_CP011787.1 Protein Homology CDS 285672 287453 . - 0 ID=cds226;Parent=gene247;Dbxref=Genbank:WP_053096787.1;Name=WP_053096787.1;gbkey=CDS;product=aspartyl-tRNA synthetase;protein_id=WP_053096787.1;transl_table=11 NZ_CP011787.1 RefSeq gene 287825 288562 . - . ID=gene248;Name=AB162_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01245;old_locus_tag=AB162_261 NZ_CP011787.1 Protein Homology CDS 287825 288562 . - 0 ID=cds227;Parent=gene248;Dbxref=Genbank:WP_053096789.1;Name=WP_053096789.1;gbkey=CDS;product=hydrolase;protein_id=WP_053096789.1;transl_table=11 NZ_CP011787.1 RefSeq gene 288658 288747 . + . ID=gene249;Name=AB162_RS01250;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01250;old_locus_tag=AB162_262 NZ_CP011787.1 tRNAscan-SE tRNA 288658 288747 . + . ID=rna21;Parent=gene249;anticodon=(pos:288692..288694);gbkey=tRNA;product=tRNA-Ser NZ_CP011787.1 tRNAscan-SE exon 288658 288747 . + . ID=id25;Parent=rna21;anticodon=(pos:288692..288694);gbkey=tRNA;product=tRNA-Ser NZ_CP011787.1 RefSeq gene 288797 290089 . - . ID=gene250;Name=AB162_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01255;old_locus_tag=AB162_263 NZ_CP011787.1 Protein Homology CDS 288797 290089 . - 0 ID=cds228;Parent=gene250;Dbxref=Genbank:WP_053096791.1;Name=WP_053096791.1;gbkey=CDS;product=seryl-tRNA synthetase;protein_id=WP_053096791.1;transl_table=11 NZ_CP011787.1 RefSeq gene 290802 292655 . - . ID=gene251;Name=AB162_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01260;old_locus_tag=AB162_265 NZ_CP011787.1 Protein Homology CDS 290802 292655 . - 0 ID=cds229;Parent=gene251;Dbxref=Genbank:WP_053096793.1;Name=WP_053096793.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096793.1;transl_table=11 NZ_CP011787.1 RefSeq gene 292725 293687 . + . ID=gene252;Name=AB162_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01265;old_locus_tag=AB162_266 NZ_CP011787.1 Protein Homology CDS 292725 293687 . + 0 ID=cds230;Parent=gene252;Dbxref=Genbank:WP_053096795.1;Name=WP_053096795.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;product=thioredoxin reductase;protein_id=WP_053096795.1;transl_table=11 NZ_CP011787.1 RefSeq gene 293800 294018 . + . ID=gene253;Name=AB162_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01270;old_locus_tag=AB162_267 NZ_CP011787.1 Protein Homology CDS 293800 294018 . + 0 ID=cds231;Parent=gene253;Dbxref=Genbank:WP_053096797.1;Name=WP_053096797.1;gbkey=CDS;product=translation initiation factor IF-1;protein_id=WP_053096797.1;transl_table=11 NZ_CP011787.1 RefSeq gene 294062 294790 . + . ID=gene254;Name=AB162_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01275;old_locus_tag=AB162_268 NZ_CP011787.1 Protein Homology CDS 294062 294790 . + 0 ID=cds232;Parent=gene254;Dbxref=Genbank:WP_053096799.1;Name=WP_053096799.1;gbkey=CDS;product=arginine ABC transporter ATP-binding protein;protein_id=WP_053096799.1;transl_table=11 NZ_CP011787.1 RefSeq gene 294836 295567 . + . ID=gene255;Name=AB162_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01280;old_locus_tag=AB162_269 NZ_CP011787.1 Protein Homology CDS 294836 295567 . + 0 ID=cds233;Parent=gene255;Dbxref=Genbank:WP_053096801.1;Name=WP_053096801.1;gbkey=CDS;product=arginine ABC transporter substrate-binding protein;protein_id=WP_053096801.1;transl_table=11 NZ_CP011787.1 RefSeq gene 295573 296253 . + . ID=gene256;Name=AB162_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01285;old_locus_tag=AB162_270 NZ_CP011787.1 Protein Homology CDS 295573 296253 . + 0 ID=cds234;Parent=gene256;Dbxref=Genbank:WP_053096804.1;Name=WP_053096804.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;product=arginine transporter permease subunit ArtQ;protein_id=WP_053096804.1;transl_table=11 NZ_CP011787.1 RefSeq gene 296265 296932 . + . ID=gene257;Name=artM;gbkey=Gene;gene=artM;gene_biotype=pseudogene;locus_tag=AB162_RS01290;old_locus_tag=AB162_271;pseudo=true NZ_CP011787.1 Protein Homology CDS 296265 296932 . + 0 ID=cds235;Parent=gene257;Note=with ArtPQJI acts to transport arginine across the inner membrane;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=artM;product=arginine transporter permease subunit ArtM;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 297382 297693 . + . ID=gene258;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=AB162_RS01295;old_locus_tag=AB162_272 NZ_CP011787.1 Protein Homology CDS 297382 297693 . + 0 ID=cds236;Parent=gene258;Dbxref=Genbank:WP_053096806.1;Name=WP_053096806.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=WP_053096806.1;transl_table=11 NZ_CP011787.1 RefSeq gene 297729 298364 . + . ID=gene259;Name=AB162_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01300;old_locus_tag=AB162_273 NZ_CP011787.1 Protein Homology CDS 297729 298364 . + 0 ID=cds237;Parent=gene259;Dbxref=Genbank:WP_053096808.1;Name=WP_053096808.1;gbkey=CDS;product=50S ribosomal protein L3;protein_id=WP_053096808.1;transl_table=11 NZ_CP011787.1 RefSeq gene 298375 298986 . + . ID=gene260;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AB162_RS01305;old_locus_tag=AB162_274 NZ_CP011787.1 Protein Homology CDS 298375 298986 . + 0 ID=cds238;Parent=gene260;Dbxref=Genbank:WP_053096810.1;Name=WP_053096810.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=WP_053096810.1;transl_table=11 NZ_CP011787.1 RefSeq gene 298983 299288 . + . ID=gene261;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AB162_RS01310;old_locus_tag=AB162_275 NZ_CP011787.1 Protein Homology CDS 298983 299288 . + 0 ID=cds239;Parent=gene261;Dbxref=Genbank:WP_053096812.1;Name=WP_053096812.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=WP_053096812.1;transl_table=11 NZ_CP011787.1 RefSeq gene 299308 300129 . + . ID=gene262;Name=AB162_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01315;old_locus_tag=AB162_276 NZ_CP011787.1 Protein Homology CDS 299308 300129 . + 0 ID=cds240;Parent=gene262;Dbxref=Genbank:WP_053096814.1;Name=WP_053096814.1;gbkey=CDS;product=50S ribosomal protein L2;protein_id=WP_053096814.1;transl_table=11 NZ_CP011787.1 RefSeq gene 300162 300440 . + . ID=gene263;Name=AB162_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01320;old_locus_tag=AB162_277 NZ_CP011787.1 Protein Homology CDS 300162 300440 . + 0 ID=cds241;Parent=gene263;Dbxref=Genbank:WP_053096816.1;Name=WP_053096816.1;gbkey=CDS;product=30S ribosomal protein S19;protein_id=WP_053096816.1;transl_table=11 NZ_CP011787.1 RefSeq gene 300495 300827 . + . ID=gene264;Name=AB162_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01325;old_locus_tag=AB162_278 NZ_CP011787.1 Protein Homology CDS 300495 300827 . + 0 ID=cds242;Parent=gene264;Dbxref=Genbank:WP_053096817.1;Name=WP_053096817.1;gbkey=CDS;product=50S ribosomal protein L22;protein_id=WP_053096817.1;transl_table=11 NZ_CP011787.1 RefSeq gene 300844 301545 . + . ID=gene265;Name=AB162_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01330;old_locus_tag=AB162_279 NZ_CP011787.1 Protein Homology CDS 300844 301545 . + 0 ID=cds243;Parent=gene265;Dbxref=Genbank:WP_053096819.1;Name=WP_053096819.1;gbkey=CDS;product=30S ribosomal protein S3;protein_id=WP_053096819.1;transl_table=11 NZ_CP011787.1 RefSeq gene 301558 301968 . + . ID=gene266;Name=AB162_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01335;old_locus_tag=AB162_280 NZ_CP011787.1 Protein Homology CDS 301558 301968 . + 0 ID=cds244;Parent=gene266;Dbxref=Genbank:WP_053096822.1;Name=WP_053096822.1;gbkey=CDS;product=50S ribosomal protein L16;protein_id=WP_053096822.1;transl_table=11 NZ_CP011787.1 RefSeq gene 301968 302162 . + . ID=gene267;Name=AB162_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01340;old_locus_tag=AB162_281 NZ_CP011787.1 Protein Homology CDS 301968 302162 . + 0 ID=cds245;Parent=gene267;Dbxref=Genbank:WP_053096824.1;Name=WP_053096824.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;product=50S ribosomal protein L29;protein_id=WP_053096824.1;transl_table=11 NZ_CP011787.1 RefSeq gene 302170 302439 . + . ID=gene268;Name=AB162_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01345;old_locus_tag=AB162_282 NZ_CP011787.1 Protein Homology CDS 302170 302439 . + 0 ID=cds246;Parent=gene268;Dbxref=Genbank:WP_053096826.1;Name=WP_053096826.1;gbkey=CDS;product=30S ribosomal protein S17;protein_id=WP_053096826.1;transl_table=11 NZ_CP011787.1 RefSeq gene 302459 302830 . + . ID=gene269;Name=AB162_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01350;old_locus_tag=AB162_283 NZ_CP011787.1 Protein Homology CDS 302459 302830 . + 0 ID=cds247;Parent=gene269;Dbxref=Genbank:WP_053096829.1;Name=WP_053096829.1;gbkey=CDS;product=50S ribosomal protein L14;protein_id=WP_053096829.1;transl_table=11 NZ_CP011787.1 RefSeq gene 302851 303177 . + . ID=gene270;Name=AB162_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01355;old_locus_tag=AB162_284 NZ_CP011787.1 Protein Homology CDS 302851 303177 . + 0 ID=cds248;Parent=gene270;Dbxref=Genbank:WP_053096831.1;Name=WP_053096831.1;gbkey=CDS;product=50S ribosomal protein L24;protein_id=WP_053096831.1;transl_table=11 NZ_CP011787.1 RefSeq gene 303192 303731 . + . ID=gene271;Name=AB162_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01360;old_locus_tag=AB162_285 NZ_CP011787.1 Protein Homology CDS 303192 303731 . + 0 ID=cds249;Parent=gene271;Dbxref=Genbank:WP_053096833.1;Name=WP_053096833.1;gbkey=CDS;product=50S ribosomal protein L5;protein_id=WP_053096833.1;transl_table=11 NZ_CP011787.1 RefSeq gene 303759 304064 . + . ID=gene272;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AB162_RS01365;old_locus_tag=AB162_286 NZ_CP011787.1 Protein Homology CDS 303759 304064 . + 0 ID=cds250;Parent=gene272;Dbxref=Genbank:WP_053096835.1;Name=WP_053096835.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=WP_053096835.1;transl_table=11 NZ_CP011787.1 RefSeq gene 304111 304503 . + . ID=gene273;Name=AB162_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01370;old_locus_tag=AB162_287 NZ_CP011787.1 Protein Homology CDS 304111 304503 . + 0 ID=cds251;Parent=gene273;Dbxref=Genbank:WP_053096837.1;Name=WP_053096837.1;gbkey=CDS;product=30S ribosomal protein S8;protein_id=WP_053096837.1;transl_table=11 NZ_CP011787.1 RefSeq gene 304533 305066 . + . ID=gene274;Name=AB162_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01375;old_locus_tag=AB162_288 NZ_CP011787.1 Protein Homology CDS 304533 305066 . + 0 ID=cds252;Parent=gene274;Dbxref=Genbank:WP_053096839.1;Name=WP_053096839.1;gbkey=CDS;product=50S ribosomal protein L6;protein_id=WP_053096839.1;transl_table=11 NZ_CP011787.1 RefSeq gene 305076 305435 . + . ID=gene275;Name=AB162_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01380;old_locus_tag=AB162_290 NZ_CP011787.1 Protein Homology CDS 305076 305435 . + 0 ID=cds253;Parent=gene275;Dbxref=Genbank:WP_053096841.1;Name=WP_053096841.1;gbkey=CDS;product=50S ribosomal protein L18;protein_id=WP_053096841.1;transl_table=11 NZ_CP011787.1 RefSeq gene 305445 305945 . + . ID=gene276;Name=AB162_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01385;old_locus_tag=AB162_291 NZ_CP011787.1 Protein Homology CDS 305445 305945 . + 0 ID=cds254;Parent=gene276;Dbxref=Genbank:WP_053096843.1;Name=WP_053096843.1;gbkey=CDS;product=30S ribosomal protein S5;protein_id=WP_053096843.1;transl_table=11 NZ_CP011787.1 RefSeq gene 305953 306132 . + . ID=gene277;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AB162_RS01390;old_locus_tag=AB162_292 NZ_CP011787.1 Protein Homology CDS 305953 306132 . + 0 ID=cds255;Parent=gene277;Dbxref=Genbank:WP_053096845.1;Name=WP_053096845.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=WP_053096845.1;transl_table=11 NZ_CP011787.1 RefSeq gene 306144 306578 . + . ID=gene278;Name=AB162_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01395;old_locus_tag=AB162_293 NZ_CP011787.1 Protein Homology CDS 306144 306578 . + 0 ID=cds256;Parent=gene278;Dbxref=Genbank:WP_053096847.1;Name=WP_053096847.1;gbkey=CDS;product=50S ribosomal protein L15;protein_id=WP_053096847.1;transl_table=11 NZ_CP011787.1 RefSeq gene 306590 307921 . + . ID=gene279;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AB162_RS01400;old_locus_tag=AB162_294 NZ_CP011787.1 Protein Homology CDS 306590 307921 . + 0 ID=cds257;Parent=gene279;Dbxref=Genbank:WP_053097378.1;Name=WP_053097378.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=WP_053097378.1;transl_table=11 NZ_CP011787.1 RefSeq gene 307934 308050 . + . ID=gene280;Name=AB162_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01405;old_locus_tag=AB162_295 NZ_CP011787.1 Protein Homology CDS 307934 308050 . + 0 ID=cds258;Parent=gene280;Dbxref=Genbank:WP_053096849.1;Name=WP_053096849.1;gbkey=CDS;product=50S ribosomal protein L36;protein_id=WP_053096849.1;transl_table=11 NZ_CP011787.1 RefSeq gene 308156 308512 . + . ID=gene281;Name=AB162_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01410;old_locus_tag=AB162_296 NZ_CP011787.1 Protein Homology CDS 308156 308512 . + 0 ID=cds259;Parent=gene281;Dbxref=Genbank:WP_053096851.1;Name=WP_053096851.1;gbkey=CDS;product=30S ribosomal protein S13;protein_id=WP_053096851.1;transl_table=11 NZ_CP011787.1 RefSeq gene 308533 308922 . + . ID=gene282;Name=AB162_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01415;old_locus_tag=AB162_297 NZ_CP011787.1 Protein Homology CDS 308533 308922 . + 0 ID=cds260;Parent=gene282;Dbxref=Genbank:WP_053096853.1;Name=WP_053096853.1;gbkey=CDS;product=30S ribosomal protein S11;protein_id=WP_053096853.1;transl_table=11 NZ_CP011787.1 RefSeq gene 308963 309583 . + . ID=gene283;Name=AB162_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01420;old_locus_tag=AB162_298 NZ_CP011787.1 Protein Homology CDS 308963 309583 . + 0 ID=cds261;Parent=gene283;Dbxref=Genbank:WP_053096855.1;Name=WP_053096855.1;gbkey=CDS;product=30S ribosomal protein S4;protein_id=WP_053096855.1;transl_table=11 NZ_CP011787.1 RefSeq gene 309614 310606 . + . ID=gene284;Name=AB162_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01425;old_locus_tag=AB162_299 NZ_CP011787.1 Protein Homology CDS 309614 310606 . + 0 ID=cds262;Parent=gene284;Dbxref=Genbank:WP_053096857.1;Name=WP_053096857.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_053096857.1;transl_table=11 NZ_CP011787.1 RefSeq gene 310653 311039 . + . ID=gene285;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AB162_RS01430;old_locus_tag=AB162_300 NZ_CP011787.1 Protein Homology CDS 310653 311039 . + 0 ID=cds263;Parent=gene285;Dbxref=Genbank:WP_053096859.1;Name=WP_053096859.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=WP_053096859.1;transl_table=11 NZ_CP011787.1 RefSeq gene 311055 311132 . - . ID=gene286;Name=AB162_RS01435;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01435;old_locus_tag=AB162_301 NZ_CP011787.1 tRNAscan-SE tRNA 311055 311132 . - . ID=rna22;Parent=gene286;anticodon=(pos:complement(311095..311097));gbkey=tRNA;product=tRNA-Thr NZ_CP011787.1 tRNAscan-SE exon 311055 311132 . - . ID=id26;Parent=rna22;anticodon=(pos:complement(311095..311097));gbkey=tRNA;product=tRNA-Thr NZ_CP011787.1 RefSeq gene 311150 311224 . - . ID=gene287;Name=AB162_RS01440;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01440;old_locus_tag=AB162_302 NZ_CP011787.1 tRNAscan-SE tRNA 311150 311224 . - . ID=rna23;Parent=gene287;anticodon=(pos:complement(311189..311191));gbkey=tRNA;product=tRNA-Gly NZ_CP011787.1 tRNAscan-SE exon 311150 311224 . - . ID=id27;Parent=rna23;anticodon=(pos:complement(311189..311191));gbkey=tRNA;product=tRNA-Gly NZ_CP011787.1 RefSeq gene 311252 311333 . - . ID=gene288;Name=AB162_RS01445;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01445;old_locus_tag=AB162_303 NZ_CP011787.1 tRNAscan-SE tRNA 311252 311333 . - . ID=rna24;Parent=gene288;anticodon=(pos:complement(311297..311299));gbkey=tRNA;product=tRNA-Tyr NZ_CP011787.1 tRNAscan-SE exon 311252 311333 . - . ID=id28;Parent=rna24;anticodon=(pos:complement(311297..311299));gbkey=tRNA;product=tRNA-Tyr NZ_CP011787.1 RefSeq gene 311351 311426 . - . ID=gene289;Name=AB162_RS01450;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01450;old_locus_tag=AB162_304 NZ_CP011787.1 tRNAscan-SE tRNA 311351 311426 . - . ID=rna25;Parent=gene289;anticodon=(pos:complement(311391..311393));gbkey=tRNA;product=tRNA-Thr NZ_CP011787.1 tRNAscan-SE exon 311351 311426 . - . ID=id29;Parent=rna25;anticodon=(pos:complement(311391..311393));gbkey=tRNA;product=tRNA-Thr NZ_CP011787.1 RefSeq gene 311570 312531 . + . ID=gene290;Name=AB162_RS01455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS01455;old_locus_tag=AB162_305;pseudo=true NZ_CP011787.1 Protein Homology CDS 311570 312531 . + 0 ID=cds264;Parent=gene290;exception=annotated by transcript or proteomic data;gbkey=CDS;product=pantothenate kinase;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 312561 312980 . + . ID=gene291;Name=AB162_RS01460;end_range=312980,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS01460;old_locus_tag=AB162_306;partial=true;pseudo=true NZ_CP011787.1 Protein Homology CDS 312561 312980 . + 0 ID=cds265;Parent=gene291;end_range=312980,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=phosphohistidine phosphatase;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 313184 314119 . + . ID=gene292;Name=AB162_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01465;old_locus_tag=AB162_307 NZ_CP011787.1 Protein Homology CDS 313184 314119 . + 0 ID=cds266;Parent=gene292;Dbxref=Genbank:WP_053097380.1;Name=WP_053097380.1;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=SAM-dependent methyltransferase;protein_id=WP_053097380.1;transl_table=11 NZ_CP011787.1 RefSeq gene 314644 315855 . + . ID=gene293;Name=AB162_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01470;old_locus_tag=AB162_308 NZ_CP011787.1 Protein Homology CDS 314644 315855 . + 0 ID=cds267;Parent=gene293;Dbxref=Genbank:WP_053096861.1;Name=WP_053096861.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_053096861.1;transl_table=11 NZ_CP011787.1 RefSeq gene 316429 317253 . + . ID=gene294;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=AB162_RS01475;old_locus_tag=AB162_310 NZ_CP011787.1 Protein Homology CDS 316429 317253 . + 0 ID=cds268;Parent=gene294;Dbxref=Genbank:WP_053096863.1;Name=WP_053096863.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=WP_053096863.1;transl_table=11 NZ_CP011787.1 RefSeq gene 317339 318208 . + . ID=gene295;Name=AB162_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01480;old_locus_tag=AB162_311 NZ_CP011787.1 Protein Homology CDS 317339 318208 . + 0 ID=cds269;Parent=gene295;Dbxref=Genbank:WP_053096865.1;Name=WP_053096865.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;product=acetyl-CoA carboxylase subunit beta;protein_id=WP_053096865.1;transl_table=11 NZ_CP011787.1 RefSeq gene 318314 319606 . + . ID=gene296;Name=AB162_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01485;old_locus_tag=AB162_312 NZ_CP011787.1 Protein Homology CDS 318314 319606 . + 0 ID=cds270;Parent=gene296;Dbxref=Genbank:WP_053096867.1;Name=WP_053096867.1;gbkey=CDS;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=WP_053096867.1;transl_table=11 NZ_CP011787.1 RefSeq gene 320199 320657 . + . ID=gene297;Name=AB162_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01490;old_locus_tag=AB162_314 NZ_CP011787.1 Protein Homology CDS 320199 320657 . + 0 ID=cds271;Parent=gene297;Dbxref=Genbank:WP_053096869.1;Name=WP_053096869.1;Note=membrane protein required for colicin V production;gbkey=CDS;product=colicin V production protein;protein_id=WP_053096869.1;transl_table=11 NZ_CP011787.1 RefSeq gene 320725 322239 . + . ID=gene298;Name=AB162_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01495;old_locus_tag=AB162_315 NZ_CP011787.1 Protein Homology CDS 320725 322239 . + 0 ID=cds272;Parent=gene298;Dbxref=Genbank:WP_053096872.1;Name=WP_053096872.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;product=amidophosphoribosyltransferase;protein_id=WP_053096872.1;transl_table=11 NZ_CP011787.1 RefSeq gene 322301 322894 . + . ID=gene299;Name=AB162_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01500;old_locus_tag=AB162_316 NZ_CP011787.1 Protein Homology CDS 322301 322894 . + 0 ID=cds273;Parent=gene299;Dbxref=Genbank:WP_053096874.1;Name=WP_053096874.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=WP_053096874.1;transl_table=11 NZ_CP011787.1 RefSeq gene 322941 324398 . - . ID=gene300;Name=AB162_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01505;old_locus_tag=AB162_317 NZ_CP011787.1 Protein Homology CDS 322941 324398 . - 0 ID=cds274;Parent=gene300;Dbxref=Genbank:WP_053096876.1;Name=WP_053096876.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit N;protein_id=WP_053096876.1;transl_table=11 NZ_CP011787.1 RefSeq gene 324415 325956 . - . ID=gene301;Name=AB162_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01510;old_locus_tag=AB162_318 NZ_CP011787.1 Protein Homology CDS 324415 325956 . - 0 ID=cds275;Parent=gene301;Dbxref=Genbank:WP_053096877.1;Name=WP_053096877.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=WP_053096877.1;transl_table=11 NZ_CP011787.1 RefSeq gene 326022 327875 . - . ID=gene302;Name=AB162_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01515;old_locus_tag=AB162_319 NZ_CP011787.1 Protein Homology CDS 326022 327875 . - 0 ID=cds276;Parent=gene302;Dbxref=Genbank:WP_053096879.1;Name=WP_053096879.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=WP_053096879.1;transl_table=11 NZ_CP011787.1 RefSeq gene 327872 328174 . - . ID=gene303;Name=AB162_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01520;old_locus_tag=AB162_320 NZ_CP011787.1 Protein Homology CDS 327872 328174 . - 0 ID=cds277;Parent=gene303;Dbxref=Genbank:WP_053096881.1;Name=WP_053096881.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit K;protein_id=WP_053096881.1;transl_table=11 NZ_CP011787.1 RefSeq gene 328191 328715 . - . ID=gene304;Name=AB162_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01525;old_locus_tag=AB162_321 NZ_CP011787.1 Protein Homology CDS 328191 328715 . - 0 ID=cds278;Parent=gene304;Dbxref=Genbank:WP_053096883.1;Name=WP_053096883.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=WP_053096883.1;transl_table=11 NZ_CP011787.1 RefSeq gene 328743 329285 . - . ID=gene305;Name=AB162_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01530;old_locus_tag=AB162_322 NZ_CP011787.1 Protein Homology CDS 328743 329285 . - 0 ID=cds279;Parent=gene305;Dbxref=Genbank:WP_053096884.1;Name=WP_053096884.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_053096884.1;transl_table=11 NZ_CP011787.1 RefSeq gene 329332 330303 . - . ID=gene306;Name=AB162_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01535;old_locus_tag=AB162_323 NZ_CP011787.1 Protein Homology CDS 329332 330303 . - 0 ID=cds280;Parent=gene306;Dbxref=Genbank:WP_053096886.1;Name=WP_053096886.1;gbkey=CDS;product=NADH:ubiquinone oxidoreductase;protein_id=WP_053096886.1;transl_table=11 NZ_CP011787.1 RefSeq gene 330300 333038 . - . ID=gene307;Name=AB162_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01540;old_locus_tag=AB162_324 NZ_CP011787.1 Protein Homology CDS 330300 333038 . - 0 ID=cds281;Parent=gene307;Dbxref=Genbank:WP_053097382.1;Name=WP_053097382.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_053097382.1;transl_table=11 NZ_CP011787.1 RefSeq gene 333124 334458 . - . ID=gene308;Name=AB162_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01545;old_locus_tag=AB162_325 NZ_CP011787.1 Protein Homology CDS 333124 334458 . - 0 ID=cds282;Parent=gene308;Dbxref=Genbank:WP_053097384.1;Name=WP_053097384.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_053097384.1;transl_table=11 NZ_CP011787.1 RefSeq gene 334458 334961 . - . ID=gene309;Name=AB162_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01550;old_locus_tag=AB162_326 NZ_CP011787.1 Protein Homology CDS 334458 334961 . - 0 ID=cds283;Parent=gene309;Dbxref=Genbank:WP_053096888.1;Name=WP_053096888.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_053096888.1;transl_table=11 NZ_CP011787.1 RefSeq gene 334965 336764 . - . ID=gene310;Name=AB162_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01555;old_locus_tag=AB162_327 NZ_CP011787.1 Protein Homology CDS 334965 336764 . - 0 ID=cds284;Parent=gene310;Dbxref=Genbank:WP_053096890.1;Name=WP_053096890.1;Note=NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms;gbkey=CDS;product=NADH:ubiquinone oxidoreductase;protein_id=WP_053096890.1;transl_table=11 NZ_CP011787.1 RefSeq gene 336806 337483 . - . ID=gene311;Name=AB162_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01560;old_locus_tag=AB162_328 NZ_CP011787.1 Protein Homology CDS 336806 337483 . - 0 ID=cds285;Parent=gene311;Dbxref=Genbank:WP_053096892.1;Name=WP_053096892.1;gbkey=CDS;product=NADH dehydrogenase;protein_id=WP_053096892.1;transl_table=11 NZ_CP011787.1 RefSeq gene 337529 337939 . - . ID=gene312;Name=AB162_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01565;old_locus_tag=AB162_329 NZ_CP011787.1 Protein Homology CDS 337529 337939 . - 0 ID=cds286;Parent=gene312;Dbxref=Genbank:WP_053096894.1;Name=WP_053096894.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096894.1;transl_table=11 NZ_CP011787.1 RefSeq gene 338159 339370 . + . ID=gene313;Name=AB162_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01570;old_locus_tag=AB162_330 NZ_CP011787.1 Protein Homology CDS 338159 339370 . + 0 ID=cds287;Parent=gene313;Dbxref=Genbank:WP_053096896.1;Name=WP_053096896.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;product=acetate kinase;protein_id=WP_053096896.1;transl_table=11 NZ_CP011787.1 RefSeq gene 339445 341583 . + . ID=gene314;Name=AB162_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01575;old_locus_tag=AB162_331 NZ_CP011787.1 Protein Homology CDS 339445 341583 . + 0 ID=cds288;Parent=gene314;Dbxref=Genbank:WP_053096899.1;Name=WP_053096899.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;product=phosphate acetyltransferase;protein_id=WP_053096899.1;transl_table=11 NZ_CP011787.1 RefSeq gene 341635 341886 . - . ID=gene315;Name=AB162_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01580;old_locus_tag=AB162_332 NZ_CP011787.1 Protein Homology CDS 341635 341886 . - 0 ID=cds289;Parent=gene315;Dbxref=Genbank:WP_053096901.1;Name=WP_053096901.1;gbkey=CDS;product=2Fe-2S ferredoxin;protein_id=WP_053096901.1;transl_table=11 NZ_CP011787.1 RefSeq gene 341902 343032 . - . ID=gene316;Name=AB162_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01585;old_locus_tag=AB162_333 NZ_CP011787.1 Protein Homology CDS 341902 343032 . - 0 ID=cds290;Parent=gene316;Dbxref=Genbank:WP_053097386.1;Name=WP_053097386.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_053097386.1;transl_table=11 NZ_CP011787.1 RefSeq gene 343079 345361 . - . ID=gene317;Name=AB162_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01590;old_locus_tag=AB162_334 NZ_CP011787.1 Protein Homology CDS 343079 345361 . - 0 ID=cds291;Parent=gene317;Dbxref=Genbank:WP_053096903.1;Name=WP_053096903.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=WP_053096903.1;transl_table=11 NZ_CP011787.1 RefSeq gene 345535 346269 . - . ID=gene318;Name=AB162_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01595;old_locus_tag=AB162_335 NZ_CP011787.1 Protein Homology CDS 345535 346269 . - 0 ID=cds292;Parent=gene318;Dbxref=Genbank:WP_053096905.1;Name=WP_053096905.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;product=3-demethylubiquinone-9 3-methyltransferase;protein_id=WP_053096905.1;transl_table=11 NZ_CP011787.1 RefSeq gene 346450 349026 . + . ID=gene319;Name=AB162_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01600;old_locus_tag=AB162_336 NZ_CP011787.1 Protein Homology CDS 346450 349026 . + 0 ID=cds293;Parent=gene319;Dbxref=Genbank:WP_053096907.1;Name=WP_053096907.1;gbkey=CDS;product=DNA gyrase subunit A;protein_id=WP_053096907.1;transl_table=11 NZ_CP011787.1 RefSeq gene 349141 350274 . + . ID=gene320;Name=AB162_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01605;old_locus_tag=AB162_337 NZ_CP011787.1 Protein Homology CDS 349141 350274 . + 0 ID=cds294;Parent=gene320;Dbxref=Genbank:WP_053096909.1;Name=WP_053096909.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096909.1;transl_table=11 NZ_CP011787.1 RefSeq gene 350330 351430 . + . ID=gene321;Name=AB162_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01610;old_locus_tag=AB162_338 NZ_CP011787.1 Protein Homology CDS 350330 351430 . + 0 ID=cds295;Parent=gene321;Dbxref=Genbank:WP_053096911.1;Name=WP_053096911.1;gbkey=CDS;product=D-alanine--D-alanine ligase;protein_id=WP_053096911.1;transl_table=11 NZ_CP011787.1 RefSeq gene 351443 351519 . - . ID=gene322;Name=AB162_RS01615;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01615;old_locus_tag=AB162_339 NZ_CP011787.1 tRNAscan-SE tRNA 351443 351519 . - . ID=rna26;Parent=gene322;anticodon=(pos:complement(351483..351485));gbkey=tRNA;product=tRNA-Pro NZ_CP011787.1 tRNAscan-SE exon 351443 351519 . - . ID=id30;Parent=rna26;anticodon=(pos:complement(351483..351485));gbkey=tRNA;product=tRNA-Pro NZ_CP011787.1 RefSeq gene 351565 351849 . - . ID=gene323;Name=AB162_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01620;old_locus_tag=AB162_340 NZ_CP011787.1 Protein Homology CDS 351565 351849 . - 0 ID=cds296;Parent=gene323;Dbxref=Genbank:WP_053096913.1;Name=WP_053096913.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;product=50S ribosomal protein L25;protein_id=WP_053096913.1;transl_table=11 NZ_CP011787.1 RefSeq gene 352053 352619 . - . ID=gene324;Name=AB162_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01625;old_locus_tag=AB162_341 NZ_CP011787.1 Protein Homology CDS 352053 352619 . - 0 ID=cds297;Parent=gene324;Dbxref=Genbank:WP_053096915.1;Name=WP_053096915.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096915.1;transl_table=11 NZ_CP011787.1 RefSeq gene 352678 353541 . - . ID=gene325;Name=AB162_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01630;old_locus_tag=AB162_342 NZ_CP011787.1 Protein Homology CDS 352678 353541 . - 0 ID=cds298;Parent=gene325;Dbxref=Genbank:WP_053096917.1;Name=WP_053096917.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;product=endonuclease IV;protein_id=WP_053096917.1;transl_table=11 NZ_CP011787.1 RefSeq gene 353783 355228 . + . ID=gene326;Name=AB162_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01635;old_locus_tag=AB162_343 NZ_CP011787.1 Protein Homology CDS 353783 355228 . + 0 ID=cds299;Parent=gene326;Dbxref=Genbank:WP_053096919.1;Name=WP_053096919.1;gbkey=CDS;product=lysine transporter;protein_id=WP_053096919.1;transl_table=11 NZ_CP011787.1 RefSeq gene 355349 356014 . + . ID=gene327;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AB162_RS01640;old_locus_tag=AB162_344 NZ_CP011787.1 Protein Homology CDS 355349 356014 . + 0 ID=cds300;Parent=gene327;Dbxref=Genbank:WP_053096922.1;Name=WP_053096922.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;product=GTP cyclohydrolase;protein_id=WP_053096922.1;transl_table=11 NZ_CP011787.1 RefSeq gene 356015 356623 . - . ID=gene328;Name=AB162_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01645;old_locus_tag=AB162_345 NZ_CP011787.1 Protein Homology CDS 356015 356623 . - 0 ID=cds301;Parent=gene328;Dbxref=Genbank:WP_053096924.1;Name=WP_053096924.1;gbkey=CDS;product=deoxycytidine triphosphate deaminase;protein_id=WP_053096924.1;transl_table=11 NZ_CP011787.1 RefSeq gene 356799 358505 . + . ID=gene329;Name=AB162_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01650;old_locus_tag=AB162_346 NZ_CP011787.1 Protein Homology CDS 356799 358505 . + 0 ID=cds302;Parent=gene329;Dbxref=Genbank:WP_053096926.1;Name=WP_053096926.1;gbkey=CDS;product=methionine--tRNA ligase;protein_id=WP_053096926.1;transl_table=11 NZ_CP011787.1 RefSeq gene 358545 359957 . - . ID=gene330;Name=AB162_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01655;old_locus_tag=AB162_347 NZ_CP011787.1 Protein Homology CDS 358545 359957 . - 0 ID=cds303;Parent=gene330;Dbxref=Genbank:WP_053096928.1;Name=WP_053096928.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;product=6-phosphogluconate dehydrogenase;protein_id=WP_053096928.1;transl_table=11 NZ_CP011787.1 RefSeq gene 360153 360764 . - . ID=gene331;Name=AB162_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01660;old_locus_tag=AB162_348 NZ_CP011787.1 Protein Homology CDS 360153 360764 . - 0 ID=cds304;Parent=gene331;Dbxref=Genbank:WP_053096930.1;Name=WP_053096930.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;product=phosphoribosyl-ATP pyrophosphatase;protein_id=WP_053096930.1;transl_table=11 NZ_CP011787.1 RefSeq gene 360758 361534 . - . ID=gene332;Name=AB162_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01665;old_locus_tag=AB162_349 NZ_CP011787.1 Protein Homology CDS 360758 361534 . - 0 ID=cds305;Parent=gene332;Dbxref=Genbank:WP_053096932.1;Name=WP_053096932.1;gbkey=CDS;product=imidazole glycerol phosphate synthase;protein_id=WP_053096932.1;transl_table=11 NZ_CP011787.1 RefSeq gene 361516 362259 . - . ID=gene333;Name=AB162_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01670;old_locus_tag=AB162_350 NZ_CP011787.1 Protein Homology CDS 361516 362259 . - 0 ID=cds306;Parent=gene333;Dbxref=Genbank:WP_053096934.1;Name=WP_053096934.1;gbkey=CDS;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=WP_053096934.1;transl_table=11 NZ_CP011787.1 RefSeq gene 362263 362868 . - . ID=gene334;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=AB162_RS01675;old_locus_tag=AB162_351 NZ_CP011787.1 Protein Homology CDS 362263 362868 . - 0 ID=cds307;Parent=gene334;Dbxref=Genbank:WP_053096936.1;Name=WP_053096936.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase;protein_id=WP_053096936.1;transl_table=11 NZ_CP011787.1 RefSeq gene 362868 363935 . - . ID=gene335;Name=AB162_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01680;old_locus_tag=AB162_352 NZ_CP011787.1 Protein Homology CDS 362868 363935 . - 0 ID=cds308;Parent=gene335;Dbxref=Genbank:WP_053096938.1;Name=WP_053096938.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;product=imidazoleglycerol-phosphate dehydratase;protein_id=WP_053096938.1;transl_table=11 NZ_CP011787.1 RefSeq gene 363958 365019 . - . ID=gene336;Name=AB162_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01685;old_locus_tag=AB162_353 NZ_CP011787.1 Protein Homology CDS 363958 365019 . - 0 ID=cds309;Parent=gene336;Dbxref=Genbank:WP_053096940.1;Name=WP_053096940.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;product=histidinol-phosphate aminotransferase;protein_id=WP_053096940.1;transl_table=11 NZ_CP011787.1 RefSeq gene 365016 366332 . - . ID=gene337;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AB162_RS01690;old_locus_tag=AB162_354 NZ_CP011787.1 Protein Homology CDS 365016 366332 . - 0 ID=cds310;Parent=gene337;Dbxref=Genbank:WP_053096942.1;Name=WP_053096942.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=WP_053096942.1;transl_table=11 NZ_CP011787.1 RefSeq gene 366337 367236 . - . ID=gene338;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=AB162_RS01695;old_locus_tag=AB162_355 NZ_CP011787.1 Protein Homology CDS 366337 367236 . - 0 ID=cds311;Parent=gene338;Dbxref=Genbank:WP_053096944.1;Name=WP_053096944.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=WP_053096944.1;transl_table=11 NZ_CP011787.1 RefSeq gene 368082 368715 . + . ID=gene339;Name=AB162_RS01700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS01700;old_locus_tag=AB162_356;pseudo=true NZ_CP011787.1 Protein Homology CDS 368082 368715 . + 0 ID=cds312;Parent=gene339;exception=annotated by transcript or proteomic data;gbkey=CDS;product=beta-lactamase;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 368756 370156 . - . ID=gene340;Name=AB162_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01705;old_locus_tag=AB162_357 NZ_CP011787.1 Protein Homology CDS 368756 370156 . - 0 ID=cds313;Parent=gene340;Dbxref=Genbank:WP_053096946.1;Name=WP_053096946.1;gbkey=CDS;product=asparaginyl-tRNA synthetase;protein_id=WP_053096946.1;transl_table=11 NZ_CP011787.1 RefSeq gene 370467 371477 . + . ID=gene341;Name=AB162_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01710;old_locus_tag=AB162_358 NZ_CP011787.1 Protein Homology CDS 370467 371477 . + 0 ID=cds314;Parent=gene341;Dbxref=Genbank:WP_053096948.1;Name=WP_053096948.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;product=dihydroorotate dehydrogenase;protein_id=WP_053096948.1;transl_table=11 NZ_CP011787.1 RefSeq gene 371518 372036 . - . ID=gene342;Name=AB162_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01715;old_locus_tag=AB162_359 NZ_CP011787.1 Protein Homology CDS 371518 372036 . - 0 ID=cds315;Parent=gene342;Dbxref=Genbank:WP_053096951.1;Name=WP_053096951.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=WP_053096951.1;transl_table=11 NZ_CP011787.1 RefSeq gene 372124 373884 . - . ID=gene343;Name=AB162_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01720;old_locus_tag=AB162_360 NZ_CP011787.1 Protein Homology CDS 372124 373884 . - 0 ID=cds316;Parent=gene343;Dbxref=Genbank:WP_053096953.1;Name=WP_053096953.1;gbkey=CDS;product=Lon protease;protein_id=WP_053096953.1;transl_table=11 NZ_CP011787.1 RefSeq gene 373963 374280 . - . ID=gene344;Name=AB162_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01725;old_locus_tag=AB162_361 NZ_CP011787.1 Protein Homology CDS 373963 374280 . - 0 ID=cds317;Parent=gene344;Dbxref=Genbank:WP_053096955.1;Name=WP_053096955.1;gbkey=CDS;product=heat-shock protein HspQ;protein_id=WP_053096955.1;transl_table=11 NZ_CP011787.1 RefSeq gene 374449 374775 . - . ID=gene345;Name=AB162_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01730;old_locus_tag=AB162_362 NZ_CP011787.1 Protein Homology CDS 374449 374775 . - 0 ID=cds318;Parent=gene345;Dbxref=Genbank:WP_053096957.1;Name=WP_053096957.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;product=sulfur relay protein TusE;protein_id=WP_053096957.1;transl_table=11 NZ_CP011787.1 RefSeq gene 374932 375016 . + . ID=gene346;Name=AB162_RS01735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01735;old_locus_tag=AB162_363 NZ_CP011787.1 tRNAscan-SE tRNA 374932 375016 . + . ID=rna27;Parent=gene346;anticodon=(pos:374966..374968);gbkey=tRNA;product=tRNA-Ser NZ_CP011787.1 tRNAscan-SE exon 374932 375016 . + . ID=id31;Parent=rna27;anticodon=(pos:374966..374968);gbkey=tRNA;product=tRNA-Ser NZ_CP011787.1 RefSeq gene 375053 376006 . - . ID=gene347;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AB162_RS01740;old_locus_tag=AB162_364 NZ_CP011787.1 Protein Homology CDS 375053 376006 . - 0 ID=cds319;Parent=gene347;Dbxref=Genbank:WP_053096960.1;Name=WP_053096960.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=WP_053096960.1;transl_table=11 NZ_CP011787.1 RefSeq gene 376061 376567 . - . ID=gene348;Name=AB162_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01745;old_locus_tag=AB162_365 NZ_CP011787.1 Protein Homology CDS 376061 376567 . - 0 ID=cds320;Parent=gene348;Dbxref=Genbank:WP_053096962.1;Name=WP_053096962.1;gbkey=CDS;product=peptide deformylase;protein_id=WP_053096962.1;transl_table=11 NZ_CP011787.1 RefSeq gene 376740 377294 . + . ID=gene349;Name=AB162_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01750;old_locus_tag=AB162_366 NZ_CP011787.1 Protein Homology CDS 376740 377294 . + 0 ID=cds321;Parent=gene349;Dbxref=Genbank:WP_053097388.1;Name=WP_053097388.1;Note=involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs;gbkey=CDS;product=tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein;protein_id=WP_053097388.1;transl_table=11 NZ_CP011787.1 RefSeq gene 377517 381029 . - . ID=gene350;Name=AB162_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01755;old_locus_tag=AB162_367 NZ_CP011787.1 Protein Homology CDS 377517 381029 . - 0 ID=cds322;Parent=gene350;Dbxref=Genbank:WP_053096964.1;Name=WP_053096964.1;gbkey=CDS;product=pyruvate-flavodoxin oxidoreductase;protein_id=WP_053096964.1;transl_table=11 NZ_CP011787.1 RefSeq gene 381121 382518 . - . ID=gene351;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AB162_RS01760;old_locus_tag=AB162_368 NZ_CP011787.1 Protein Homology CDS 381121 382518 . - 0 ID=cds323;Parent=gene351;Dbxref=Genbank:WP_053096966.1;Name=WP_053096966.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase;protein_id=WP_053096966.1;transl_table=11 NZ_CP011787.1 RefSeq gene 382699 382774 . + . ID=gene352;Name=AB162_RS01765;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01765;old_locus_tag=AB162_369 NZ_CP011787.1 tRNAscan-SE tRNA 382699 382774 . + . ID=rna28;Parent=gene352;anticodon=(pos:382732..382734);gbkey=tRNA;product=tRNA-Asn NZ_CP011787.1 tRNAscan-SE exon 382699 382774 . + . ID=id32;Parent=rna28;anticodon=(pos:382732..382734);gbkey=tRNA;product=tRNA-Asn NZ_CP011787.1 RefSeq gene 382957 384057 . + . ID=gene353;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AB162_RS01770;old_locus_tag=AB162_370 NZ_CP011787.1 Protein Homology CDS 382957 384057 . + 0 ID=cds324;Parent=gene353;Dbxref=Genbank:WP_053096969.1;Name=WP_053096969.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA 2-thiouridylase;protein_id=WP_053096969.1;transl_table=11 NZ_CP011787.1 RefSeq gene 384100 384729 . + . ID=gene354;Name=AB162_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01775;old_locus_tag=AB162_371 NZ_CP011787.1 Protein Homology CDS 384100 384729 . + 0 ID=cds325;Parent=gene354;Dbxref=Genbank:WP_053096970.1;Name=WP_053096970.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;product=lysogenization regulator;protein_id=WP_053096970.1;transl_table=11 NZ_CP011787.1 RefSeq gene 384771 386147 . + . ID=gene355;Name=AB162_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01780;old_locus_tag=AB162_372 NZ_CP011787.1 Protein Homology CDS 384771 386147 . + 0 ID=cds326;Parent=gene355;Dbxref=Genbank:WP_053096972.1;Name=WP_053096972.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;product=adenylosuccinate lyase;protein_id=WP_053096972.1;transl_table=11 NZ_CP011787.1 RefSeq gene 386211 387464 . - . ID=gene356;Name=AB162_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01785;old_locus_tag=AB162_373 NZ_CP011787.1 Protein Homology CDS 386211 387464 . - 0 ID=cds327;Parent=gene356;Dbxref=Genbank:WP_053096974.1;Name=WP_053096974.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;product=outer membrane-specific lipoprotein transporter subunit LolE;protein_id=WP_053096974.1;transl_table=11 NZ_CP011787.1 RefSeq gene 387472 388176 . - . ID=gene357;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=AB162_RS01790;old_locus_tag=AB162_374 NZ_CP011787.1 Protein Homology CDS 387472 388176 . - 0 ID=cds328;Parent=gene357;Dbxref=Genbank:WP_053096977.1;Name=WP_053096977.1;Note=outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone;gbkey=CDS;gene=lolD;product=lipoprotein ABC transporter ATP-binding protein;protein_id=WP_053096977.1;transl_table=11 NZ_CP011787.1 RefSeq gene 388179 389366 . - . ID=gene358;Name=AB162_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01795;old_locus_tag=AB162_375 NZ_CP011787.1 Protein Homology CDS 388179 389366 . - 0 ID=cds329;Parent=gene358;Dbxref=Genbank:WP_053096979.1;Name=WP_053096979.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096979.1;transl_table=11 NZ_CP011787.1 RefSeq gene 389432 389959 . - . ID=gene359;Name=AB162_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01800;old_locus_tag=AB162_376 NZ_CP011787.1 Protein Homology CDS 389432 389959 . - 0 ID=cds330;Parent=gene359;Dbxref=Genbank:WP_053096981.1;Name=WP_053096981.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096981.1;transl_table=11 NZ_CP011787.1 RefSeq gene 390001 390348 . - . ID=gene360;Name=AB162_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01805;old_locus_tag=AB162_377 NZ_CP011787.1 Protein Homology CDS 390001 390348 . - 0 ID=cds331;Parent=gene360;Dbxref=Genbank:WP_053096983.1;Name=WP_053096983.1;gbkey=CDS;product=purine nucleoside phosphoramidase;protein_id=WP_053096983.1;transl_table=11 NZ_CP011787.1 RefSeq gene 390404 391210 . - . ID=gene361;Name=AB162_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01810;old_locus_tag=AB162_378 NZ_CP011787.1 Protein Homology CDS 390404 391210 . - 0 ID=cds332;Parent=gene361;Dbxref=Genbank:WP_053096985.1;Name=WP_053096985.1;gbkey=CDS;product=DNAse;protein_id=WP_053096985.1;transl_table=11 NZ_CP011787.1 RefSeq gene 391223 392227 . - . ID=gene362;Name=AB162_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01815;old_locus_tag=AB162_379 NZ_CP011787.1 Protein Homology CDS 391223 392227 . - 0 ID=cds333;Parent=gene362;Dbxref=Genbank:WP_053096987.1;Name=WP_053096987.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053096987.1;transl_table=11 NZ_CP011787.1 RefSeq gene 392244 392885 . - . ID=gene363;Name=AB162_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01820;old_locus_tag=AB162_380 NZ_CP011787.1 Protein Homology CDS 392244 392885 . - 0 ID=cds334;Parent=gene363;Dbxref=Genbank:WP_053096989.1;Name=WP_053096989.1;gbkey=CDS;product=thymidylate kinase;protein_id=WP_053096989.1;transl_table=11 NZ_CP011787.1 RefSeq gene 393543 393788 . - . ID=gene364;Name=AB162_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01825;old_locus_tag=AB162_382 NZ_CP011787.1 Protein Homology CDS 393543 393788 . - 0 ID=cds335;Parent=gene364;Dbxref=Genbank:WP_053097390.1;Name=WP_053097390.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;product=acyl carrier protein;protein_id=WP_053097390.1;transl_table=11 NZ_CP011787.1 RefSeq gene 393948 394682 . - . ID=gene365;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AB162_RS01830;old_locus_tag=AB162_383 NZ_CP011787.1 Protein Homology CDS 393948 394682 . - 0 ID=cds336;Parent=gene365;Dbxref=Genbank:WP_053096990.1;Name=WP_053096990.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=WP_053096990.1;transl_table=11 NZ_CP011787.1 RefSeq gene 394679 395629 . - . ID=gene366;Name=AB162_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01835;old_locus_tag=AB162_384 NZ_CP011787.1 Protein Homology CDS 394679 395629 . - 0 ID=cds337;Parent=gene366;Dbxref=Genbank:WP_053096992.1;Name=WP_053096992.1;gbkey=CDS;product=malonyl CoA-ACP transacylase;protein_id=WP_053096992.1;transl_table=11 NZ_CP011787.1 RefSeq gene 395644 396600 . - . ID=gene367;Name=AB162_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01840;old_locus_tag=AB162_385 NZ_CP011787.1 Protein Homology CDS 395644 396600 . - 0 ID=cds338;Parent=gene367;Dbxref=Genbank:WP_053096994.1;Name=WP_053096994.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=WP_053096994.1;transl_table=11 NZ_CP011787.1 RefSeq gene 396611 397627 . - . ID=gene368;Name=AB162_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01845;old_locus_tag=AB162_386 NZ_CP011787.1 Protein Homology CDS 396611 397627 . - 0 ID=cds339;Parent=gene368;Dbxref=Genbank:WP_053096996.1;Name=WP_053096996.1;gbkey=CDS;product=phosphate acyltransferase;protein_id=WP_053096996.1;transl_table=11 NZ_CP011787.1 RefSeq gene 397654 397824 . - . ID=gene369;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AB162_RS01850;old_locus_tag=AB162_387 NZ_CP011787.1 Protein Homology CDS 397654 397824 . - 0 ID=cds340;Parent=gene369;Dbxref=Genbank:WP_053096998.1;Name=WP_053096998.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=WP_053096998.1;transl_table=11 NZ_CP011787.1 RefSeq gene 398083 399054 . - . ID=gene370;Name=AB162_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01855;old_locus_tag=AB162_388 NZ_CP011787.1 Protein Homology CDS 398083 399054 . - 0 ID=cds341;Parent=gene370;Dbxref=Genbank:WP_053097000.1;Name=WP_053097000.1;Note=catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA;gbkey=CDS;product=23S rRNA pseudouridylate synthase;protein_id=WP_053097000.1;transl_table=11 NZ_CP011787.1 RefSeq gene 399528 401348 . + . ID=gene371;Name=AB162_RS01860;end_range=401348,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS01860;old_locus_tag=AB162_389;partial=true;pseudo=true NZ_CP011787.1 Protein Homology CDS 399528 401348 . + 0 ID=cds342;Parent=gene371;end_range=401348,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=ribonuclease E;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 401923 402972 . + . ID=gene372;Name=AB162_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01865;old_locus_tag=AB162_390 NZ_CP011787.1 Protein Homology CDS 401923 402972 . + 0 ID=cds343;Parent=gene372;Dbxref=Genbank:WP_053097002.1;Name=WP_053097002.1;gbkey=CDS;product=dihydroorotase;protein_id=WP_053097002.1;transl_table=11 NZ_CP011787.1 RefSeq gene 403156 404973 . + . ID=gene373;Name=AB162_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01870;old_locus_tag=AB162_391 NZ_CP011787.1 Protein Homology CDS 403156 404973 . + 0 ID=cds344;Parent=gene373;Dbxref=Genbank:WP_053097392.1;Name=WP_053097392.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;product=signal peptide peptidase SppA;protein_id=WP_053097392.1;transl_table=11 NZ_CP011787.1 RefSeq gene 405071 406072 . + . ID=gene374;Name=AB162_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01875;old_locus_tag=AB162_392 NZ_CP011787.1 Protein Homology CDS 405071 406072 . + 0 ID=cds345;Parent=gene374;Dbxref=Genbank:WP_053097004.1;Name=WP_053097004.1;gbkey=CDS;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_053097004.1;transl_table=11 NZ_CP011787.1 RefSeq gene 406156 406698 . + . ID=gene375;Name=AB162_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01880;old_locus_tag=AB162_393 NZ_CP011787.1 Protein Homology CDS 406156 406698 . + 0 ID=cds346;Parent=gene375;Dbxref=Genbank:WP_053097006.1;Name=WP_053097006.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097006.1;transl_table=11 NZ_CP011787.1 RefSeq gene 406740 407432 . + . ID=gene376;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AB162_RS01885;old_locus_tag=AB162_394 NZ_CP011787.1 Protein Homology CDS 406740 407432 . + 0 ID=cds347;Parent=gene376;Dbxref=Genbank:WP_053097008.1;Name=WP_053097008.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum formation inhibitor;protein_id=WP_053097008.1;transl_table=11 NZ_CP011787.1 RefSeq gene 407447 408259 . + . ID=gene377;Name=AB162_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01890;old_locus_tag=AB162_395 NZ_CP011787.1 Protein Homology CDS 407447 408259 . + 0 ID=cds348;Parent=gene377;Dbxref=Genbank:WP_053097010.1;Name=WP_053097010.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;product=cell division inhibitor MinD;protein_id=WP_053097010.1;transl_table=11 NZ_CP011787.1 RefSeq gene 408263 408547 . + . ID=gene378;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AB162_RS01895;old_locus_tag=AB162_396 NZ_CP011787.1 Protein Homology CDS 408263 408547 . + 0 ID=cds349;Parent=gene378;Dbxref=Genbank:WP_053097012.1;Name=WP_053097012.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor MinE;protein_id=WP_053097012.1;transl_table=11 NZ_CP011787.1 RefSeq gene 408599 409315 . - . ID=gene379;Name=AB162_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01900;old_locus_tag=AB162_397 NZ_CP011787.1 Protein Homology CDS 408599 409315 . - 0 ID=cds350;Parent=gene379;Dbxref=Genbank:WP_053097014.1;Name=WP_053097014.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097014.1;transl_table=11 NZ_CP011787.1 RefSeq gene 409757 410566 . - . ID=gene380;Name=AB162_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01905;old_locus_tag=AB162_398 NZ_CP011787.1 Protein Homology CDS 409757 410566 . - 0 ID=cds351;Parent=gene380;Dbxref=Genbank:WP_053097016.1;Name=WP_053097016.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;product=PTS mannose transporter subunit IID;protein_id=WP_053097016.1;transl_table=11 NZ_CP011787.1 RefSeq gene 410615 411421 . - . ID=gene381;Name=AB162_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01910;old_locus_tag=AB162_399 NZ_CP011787.1 Protein Homology CDS 410615 411421 . - 0 ID=cds352;Parent=gene381;Dbxref=Genbank:WP_053097018.1;Name=WP_053097018.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site;gbkey=CDS;product=PTS mannose transporter subunit IIC;protein_id=WP_053097018.1;transl_table=11 NZ_CP011787.1 RefSeq gene 411495 412469 . - . ID=gene382;Name=AB162_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01915;old_locus_tag=AB162_400 NZ_CP011787.1 Protein Homology CDS 411495 412469 . - 0 ID=cds353;Parent=gene382;Dbxref=Genbank:WP_053097020.1;Name=WP_053097020.1;Note=catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B subunit IIA transfers a phosphoryl group to subunit IIB%3B subunit IIB transfers the phosphoryl group to the substrate;gbkey=CDS;product=PTS mannose transporter subunit IIAB;protein_id=WP_053097020.1;transl_table=11 NZ_CP011787.1 RefSeq gene 412890 414122 . + . ID=gene383;Name=AB162_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01920;old_locus_tag=AB162_401 NZ_CP011787.1 Protein Homology CDS 412890 414122 . + 0 ID=cds354;Parent=gene383;Dbxref=Genbank:WP_053097022.1;Name=WP_053097022.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097022.1;transl_table=11 NZ_CP011787.1 RefSeq gene 414716 415675 . + . ID=gene384;Name=AB162_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01925;old_locus_tag=AB162_402 NZ_CP011787.1 Protein Homology CDS 414716 415675 . + 0 ID=cds355;Parent=gene384;Dbxref=Genbank:WP_053097024.1;Name=WP_053097024.1;gbkey=CDS;product=sulfurtransferase;protein_id=WP_053097024.1;transl_table=11 NZ_CP011787.1 RefSeq gene 415705 415780 . - . ID=gene385;Name=AB162_RS01930;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01930;old_locus_tag=AB162_403 NZ_CP011787.1 tRNAscan-SE tRNA 415705 415780 . - . ID=rna29;Parent=gene385;anticodon=(pos:complement(415745..415747));gbkey=tRNA;product=tRNA-Ala NZ_CP011787.1 tRNAscan-SE exon 415705 415780 . - . ID=id33;Parent=rna29;anticodon=(pos:complement(415745..415747));gbkey=tRNA;product=tRNA-Ala NZ_CP011787.1 RefSeq gene 415845 417254 . - . ID=gene386;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AB162_RS01935;old_locus_tag=AB162_404 NZ_CP011787.1 Protein Homology CDS 415845 417254 . - 0 ID=cds356;Parent=gene386;Dbxref=Genbank:WP_053097026.1;Name=WP_053097026.1;Note=catalyzes a two-step reaction%2C first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes;gbkey=CDS;gene=gltX;product=glutamine--tRNA ligase;protein_id=WP_053097026.1;transl_table=11 NZ_CP011787.1 RefSeq gene 417355 417430 . + . ID=gene387;Name=AB162_RS01940;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01940;old_locus_tag=AB162_405 NZ_CP011787.1 tRNAscan-SE tRNA 417355 417430 . + . ID=rna30;Parent=gene387;anticodon=(pos:417388..417390);gbkey=tRNA;product=tRNA-Val NZ_CP011787.1 tRNAscan-SE exon 417355 417430 . + . ID=id34;Parent=rna30;anticodon=(pos:417388..417390);gbkey=tRNA;product=tRNA-Val NZ_CP011787.1 RefSeq gene 417472 417547 . + . ID=gene388;Name=AB162_RS01945;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS01945;old_locus_tag=AB162_406 NZ_CP011787.1 tRNAscan-SE tRNA 417472 417547 . + . ID=rna31;Parent=gene388;anticodon=(pos:417505..417507);gbkey=tRNA;product=tRNA-Lys NZ_CP011787.1 tRNAscan-SE exon 417472 417547 . + . ID=id35;Parent=rna31;anticodon=(pos:417505..417507);gbkey=tRNA;product=tRNA-Lys NZ_CP011787.1 RefSeq gene 417607 419118 . - . ID=gene389;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AB162_RS01950;old_locus_tag=AB162_407 NZ_CP011787.1 Protein Homology CDS 417607 419118 . - 0 ID=cds357;Parent=gene389;Dbxref=Genbank:WP_053097028.1;Name=WP_053097028.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;product=multidrug resistance protein B;protein_id=WP_053097028.1;transl_table=11 NZ_CP011787.1 RefSeq gene 419131 420306 . - . ID=gene390;Name=AB162_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01955;old_locus_tag=AB162_408 NZ_CP011787.1 Protein Homology CDS 419131 420306 . - 0 ID=cds358;Parent=gene390;Dbxref=Genbank:WP_053097030.1;Name=WP_053097030.1;gbkey=CDS;product=hemolysin D;protein_id=WP_053097030.1;transl_table=11 NZ_CP011787.1 RefSeq gene 420388 420852 . - . ID=gene391;Name=AB162_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01960;old_locus_tag=AB162_409 NZ_CP011787.1 Protein Homology CDS 420388 420852 . - 0 ID=cds359;Parent=gene391;Dbxref=Genbank:WP_053097032.1;Name=WP_053097032.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;product=cysteine desufuration protein SufE;protein_id=WP_053097032.1;transl_table=11 NZ_CP011787.1 RefSeq gene 420888 422111 . - . ID=gene392;Name=AB162_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01965;old_locus_tag=AB162_410 NZ_CP011787.1 Protein Homology CDS 420888 422111 . - 0 ID=cds360;Parent=gene392;Dbxref=Genbank:WP_053097034.1;Name=WP_053097034.1;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=WP_053097034.1;transl_table=11 NZ_CP011787.1 RefSeq gene 422108 423403 . - . ID=gene393;Name=AB162_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01970;old_locus_tag=AB162_411 NZ_CP011787.1 Protein Homology CDS 422108 423403 . - 0 ID=cds361;Parent=gene393;Dbxref=Genbank:WP_053097036.1;Name=WP_053097036.1;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_053097036.1;transl_table=11 NZ_CP011787.1 RefSeq gene 423381 424124 . - . ID=gene394;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AB162_RS01975;old_locus_tag=AB162_412 NZ_CP011787.1 Protein Homology CDS 423381 424124 . - 0 ID=cds362;Parent=gene394;Dbxref=Genbank:WP_053097038.1;Name=WP_053097038.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=cysteine desulfurase;protein_id=WP_053097038.1;transl_table=11 NZ_CP011787.1 RefSeq gene 424217 425665 . - . ID=gene395;Name=AB162_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01980;old_locus_tag=AB162_413 NZ_CP011787.1 Protein Homology CDS 424217 425665 . - 0 ID=cds363;Parent=gene395;Dbxref=Genbank:WP_053097395.1;Name=WP_053097395.1;Note=with SufCD activates cysteine desulfurase SufS;gbkey=CDS;product=cysteine desulfurase;protein_id=WP_053097395.1;transl_table=11 NZ_CP011787.1 RefSeq gene 425703 426077 . - . ID=gene396;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=AB162_RS01985;old_locus_tag=AB162_414 NZ_CP011787.1 Protein Homology CDS 425703 426077 . - 0 ID=cds364;Parent=gene396;Dbxref=Genbank:WP_053097040.1;Name=WP_053097040.1;Note=functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]%3B [4Fe-4S]) are assembled%3B forms a homodimer%3B similar to IscA protein;gbkey=CDS;gene=sufA;product=iron-sulfur cluster assembly scaffold protein;protein_id=WP_053097040.1;transl_table=11 NZ_CP011787.1 RefSeq gene 426097 428472 . - . ID=gene397;Name=AB162_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01990;old_locus_tag=AB162_415 NZ_CP011787.1 Protein Homology CDS 426097 428472 . - 0 ID=cds365;Parent=gene397;Dbxref=Genbank:WP_053097042.1;Name=WP_053097042.1;gbkey=CDS;product=phenylalanine--tRNA ligase;protein_id=WP_053097042.1;transl_table=11 NZ_CP011787.1 RefSeq gene 428490 429482 . - . ID=gene398;Name=AB162_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS01995;old_locus_tag=AB162_416 NZ_CP011787.1 Protein Homology CDS 428490 429482 . - 0 ID=cds366;Parent=gene398;Dbxref=Genbank:WP_053097045.1;Name=WP_053097045.1;gbkey=CDS;product=phenylalanyl-tRNA synthetase;protein_id=WP_053097045.1;transl_table=11 NZ_CP011787.1 RefSeq gene 429618 430004 . - . ID=gene399;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AB162_RS02000;old_locus_tag=AB162_417 NZ_CP011787.1 Protein Homology CDS 429618 430004 . - 0 ID=cds367;Parent=gene399;Dbxref=Genbank:WP_053097047.1;Name=WP_053097047.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=WP_053097047.1;transl_table=11 NZ_CP011787.1 RefSeq gene 430055 430252 . - . ID=gene400;Name=AB162_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02005;old_locus_tag=AB162_418 NZ_CP011787.1 Protein Homology CDS 430055 430252 . - 0 ID=cds368;Parent=gene400;Dbxref=Genbank:WP_053097049.1;Name=WP_053097049.1;gbkey=CDS;product=50S ribosomal protein L35;protein_id=WP_053097049.1;transl_table=11 NZ_CP011787.1 RefSeq gene 430300 430842 . - . ID=gene401;Name=AB162_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02010;old_locus_tag=AB162_419 NZ_CP011787.1 Protein Homology CDS 430300 430842 . - 0 ID=cds369;Parent=gene401;Dbxref=Genbank:WP_053097051.1;Name=WP_053097051.1;gbkey=CDS;product=translation initiation factor IF-3;protein_id=WP_053097051.1;transl_table=11 NZ_CP011787.1 RefSeq gene 430830 432758 . - . ID=gene402;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AB162_RS02015;old_locus_tag=AB162_420 NZ_CP011787.1 Protein Homology CDS 430830 432758 . - 0 ID=cds370;Parent=gene402;Dbxref=Genbank:WP_053097054.1;Name=WP_053097054.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;product=threonine--tRNA ligase;protein_id=WP_053097054.1;transl_table=11 NZ_CP011787.1 RefSeq gene 432986 433702 . - . ID=gene403;Name=AB162_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02020;old_locus_tag=AB162_421 NZ_CP011787.1 Protein Homology CDS 432986 433702 . - 0 ID=cds371;Parent=gene403;Dbxref=Genbank:WP_053097055.1;Name=WP_053097055.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;product=DNA polymerase III subunit epsilon;protein_id=WP_053097055.1;transl_table=11 NZ_CP011787.1 RefSeq gene 433769 434248 . + . ID=gene404;Name=AB162_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02025;old_locus_tag=AB162_422 NZ_CP011787.1 Protein Homology CDS 433769 434248 . + 0 ID=cds372;Parent=gene404;Dbxref=Genbank:WP_053097057.1;Name=WP_053097057.1;gbkey=CDS;product=ribonuclease H;protein_id=WP_053097057.1;transl_table=11 NZ_CP011787.1 RefSeq gene 434245 435009 . + . ID=gene405;Name=AB162_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02030;old_locus_tag=AB162_423 NZ_CP011787.1 Protein Homology CDS 434245 435009 . + 0 ID=cds373;Parent=gene405;Dbxref=Genbank:WP_053097059.1;Name=WP_053097059.1;Note=catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione%3B plays an important role in cellular detoxification using glutathione;gbkey=CDS;product=hydroxyacylglutathione hydrolase;protein_id=WP_053097059.1;transl_table=11 NZ_CP011787.1 RefSeq gene 435040 435777 . - . ID=gene406;Name=AB162_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02035;old_locus_tag=AB162_424 NZ_CP011787.1 Protein Homology CDS 435040 435777 . - 0 ID=cds374;Parent=gene406;Dbxref=Genbank:WP_053097061.1;Name=WP_053097061.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097061.1;transl_table=11 NZ_CP011787.1 RefSeq gene 435881 436930 . - . ID=gene407;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AB162_RS02040;old_locus_tag=AB162_425 NZ_CP011787.1 Protein Homology CDS 435881 436930 . - 0 ID=cds375;Parent=gene407;Dbxref=Genbank:WP_053097063.1;Name=WP_053097063.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;product=murein transglycosylase;protein_id=WP_053097063.1;transl_table=11 NZ_CP011787.1 RefSeq gene 436985 437218 . - . ID=gene408;Name=AB162_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02045;old_locus_tag=AB162_426 NZ_CP011787.1 Protein Homology CDS 436985 437218 . - 0 ID=cds376;Parent=gene408;Dbxref=Genbank:WP_053097065.1;Name=WP_053097065.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097065.1;transl_table=11 NZ_CP011787.1 RefSeq gene 437298 438428 . - . ID=gene409;Name=AB162_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02050;old_locus_tag=AB162_427 NZ_CP011787.1 Protein Homology CDS 437298 438428 . - 0 ID=cds377;Parent=gene409;Dbxref=Genbank:WP_053097068.1;Name=WP_053097068.1;gbkey=CDS;product=coproporphyrinogen III oxidase;protein_id=WP_053097068.1;transl_table=11 NZ_CP011787.1 RefSeq gene 438454 438882 . - . ID=gene410;Name=AB162_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02055;old_locus_tag=AB162_428 NZ_CP011787.1 Protein Homology CDS 438454 438882 . - 0 ID=cds378;Parent=gene410;Dbxref=Genbank:WP_053097070.1;Name=WP_053097070.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;product=Holliday junction resolvase;protein_id=WP_053097070.1;transl_table=11 NZ_CP011787.1 RefSeq gene 439080 440030 . - . ID=gene411;Name=AB162_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02060;old_locus_tag=AB162_429 NZ_CP011787.1 Protein Homology CDS 439080 440030 . - 0 ID=cds379;Parent=gene411;Dbxref=Genbank:WP_053097072.1;Name=WP_053097072.1;Note=catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione;gbkey=CDS;product=glutathione synthetase;protein_id=WP_053097072.1;transl_table=11 NZ_CP011787.1 RefSeq gene 440127 440729 . - . ID=gene412;Name=AB162_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02065;old_locus_tag=AB162_430 NZ_CP011787.1 Protein Homology CDS 440127 440729 . - 0 ID=cds380;Parent=gene412;Dbxref=Genbank:WP_053097074.1;Name=WP_053097074.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;product=superoxide dismutase;protein_id=WP_053097074.1;transl_table=11 NZ_CP011787.1 RefSeq gene 440776 441348 . - . ID=gene413;Name=AB162_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02070;old_locus_tag=AB162_431 NZ_CP011787.1 Protein Homology CDS 440776 441348 . - 0 ID=cds381;Parent=gene413;Dbxref=Genbank:WP_053097075.1;Name=WP_053097075.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;product=Fe/S biogenesis protein NfuA;protein_id=WP_053097075.1;transl_table=11 NZ_CP011787.1 RefSeq gene 441572 441648 . + . ID=gene414;Name=AB162_RS02075;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS02075;old_locus_tag=AB162_432 NZ_CP011787.1 tRNAscan-SE tRNA 441572 441648 . + . ID=rna32;Parent=gene414;anticodon=(pos:441606..441608);gbkey=tRNA;product=tRNA-Ile NZ_CP011787.1 tRNAscan-SE exon 441572 441648 . + . ID=id36;Parent=rna32;anticodon=(pos:441606..441608);gbkey=tRNA;product=tRNA-Ile NZ_CP011787.1 RefSeq gene 441667 441739 . + . ID=gene415;Name=AB162_RS02080;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS02080;old_locus_tag=AB162_433 NZ_CP011787.1 tRNAscan-SE tRNA 441667 441739 . + . ID=rna33;Parent=gene415;anticodon=(pos:441700..441702);gbkey=tRNA;product=tRNA-Ala NZ_CP011787.1 tRNAscan-SE exon 441667 441739 . + . ID=id37;Parent=rna33;anticodon=(pos:441700..441702);gbkey=tRNA;product=tRNA-Ala NZ_CP011787.1 RefSeq gene 441811 442254 . + . ID=gene416;Name=AB162_RS02085;end_range=442254,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS02085;old_locus_tag=AB162_434;partial=true;pseudo=true NZ_CP011787.1 Protein Homology CDS 441811 442254 . + 0 ID=cds382;Parent=gene416;Note=Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB;end_range=442254,.;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=zinc uptake transcriptional repressor;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 442271 442669 . + . ID=gene417;Name=AB162_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02090;old_locus_tag=AB162_435 NZ_CP011787.1 Protein Homology CDS 442271 442669 . + 0 ID=cds383;Parent=gene417;Dbxref=Genbank:WP_053097397.1;Name=WP_053097397.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfur relay protein TusD;protein_id=WP_053097397.1;transl_table=11 NZ_CP011787.1 RefSeq gene 442687 443049 . + . ID=gene418;Name=AB162_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02095;old_locus_tag=AB162_436 NZ_CP011787.1 Protein Homology CDS 442687 443049 . + 0 ID=cds384;Parent=gene418;Dbxref=Genbank:WP_053097077.1;Name=WP_053097077.1;gbkey=CDS;product=sulfur relay protein TusC;protein_id=WP_053097077.1;transl_table=11 NZ_CP011787.1 RefSeq gene 443052 443345 . + . ID=gene419;Name=AB162_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02100;old_locus_tag=AB162_437 NZ_CP011787.1 Protein Homology CDS 443052 443345 . + 0 ID=cds385;Parent=gene419;Dbxref=Genbank:WP_053097079.1;Name=WP_053097079.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;product=sulfur relay protein TusB;protein_id=WP_053097079.1;transl_table=11 NZ_CP011787.1 RefSeq gene 443433 443807 . + . ID=gene420;Name=AB162_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02105;old_locus_tag=AB162_438 NZ_CP011787.1 Protein Homology CDS 443433 443807 . + 0 ID=cds386;Parent=gene420;Dbxref=Genbank:WP_053097081.1;Name=WP_053097081.1;gbkey=CDS;product=30S ribosomal protein S12;protein_id=WP_053097081.1;transl_table=11 NZ_CP011787.1 RefSeq gene 443876 444346 . + . ID=gene421;Name=AB162_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02110;old_locus_tag=AB162_439 NZ_CP011787.1 Protein Homology CDS 443876 444346 . + 0 ID=cds387;Parent=gene421;Dbxref=Genbank:WP_053097083.1;Name=WP_053097083.1;gbkey=CDS;product=30S ribosomal protein S7;protein_id=WP_053097083.1;transl_table=11 NZ_CP011787.1 RefSeq gene 444395 446527 . + . ID=gene422;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AB162_RS02115;old_locus_tag=AB162_440 NZ_CP011787.1 Protein Homology CDS 444395 446527 . + 0 ID=cds388;Parent=gene422;Dbxref=Genbank:WP_053097089.1;Name=WP_053097089.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=WP_053097089.1;transl_table=11 NZ_CP011787.1 RefSeq gene 446586 447770 . + . ID=gene423;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AB162_RS02120;old_locus_tag=AB162_441 NZ_CP011787.1 Protein Homology CDS 446586 447770 . + 0 ID=cds389;Parent=gene423;Dbxref=Genbank:WP_053097095.1;Name=WP_053097095.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;product=elongation factor Tu;protein_id=WP_053097095.1;transl_table=11 NZ_CP011787.1 RefSeq gene 447787 448167 . + . ID=gene424;Name=AB162_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02125;old_locus_tag=AB162_442 NZ_CP011787.1 Protein Homology CDS 447787 448167 . + 0 ID=cds390;Parent=gene424;Dbxref=Genbank:WP_053097096.1;Name=WP_053097096.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097096.1;transl_table=11 NZ_CP011787.1 RefSeq gene 448168 448713 . + . ID=gene425;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AB162_RS02130;old_locus_tag=AB162_443 NZ_CP011787.1 Protein Homology CDS 448168 448713 . + 0 ID=cds391;Parent=gene425;Dbxref=Genbank:WP_053097097.1;Name=WP_053097097.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription antiterminator NusG;protein_id=WP_053097097.1;transl_table=11 NZ_CP011787.1 RefSeq gene 448758 449186 . + . ID=gene426;Name=AB162_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02135;old_locus_tag=AB162_444 NZ_CP011787.1 Protein Homology CDS 448758 449186 . + 0 ID=cds392;Parent=gene426;Dbxref=Genbank:WP_053097098.1;Name=WP_053097098.1;gbkey=CDS;product=50S ribosomal protein L11;protein_id=WP_053097098.1;transl_table=11 NZ_CP011787.1 RefSeq gene 449190 449882 . + . ID=gene427;Name=AB162_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02140;old_locus_tag=AB162_445 NZ_CP011787.1 Protein Homology CDS 449190 449882 . + 0 ID=cds393;Parent=gene427;Dbxref=Genbank:WP_053097099.1;Name=WP_053097099.1;gbkey=CDS;product=50S ribosomal protein L1;protein_id=WP_053097099.1;transl_table=11 NZ_CP011787.1 RefSeq gene 449998 450495 . + . ID=gene428;Name=AB162_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02145;old_locus_tag=AB162_446 NZ_CP011787.1 Protein Homology CDS 449998 450495 . + 0 ID=cds394;Parent=gene428;Dbxref=Genbank:WP_053097100.1;Name=WP_053097100.1;gbkey=CDS;product=50S ribosomal protein L10;protein_id=WP_053097100.1;transl_table=11 NZ_CP011787.1 RefSeq gene 450520 450885 . + . ID=gene429;Name=AB162_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02150;old_locus_tag=AB162_447 NZ_CP011787.1 Protein Homology CDS 450520 450885 . + 0 ID=cds395;Parent=gene429;Dbxref=Genbank:WP_053097101.1;Name=WP_053097101.1;gbkey=CDS;product=50S ribosomal protein L7/L12;protein_id=WP_053097101.1;transl_table=11 NZ_CP011787.1 RefSeq gene 451070 455095 . + . ID=gene430;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AB162_RS02155;old_locus_tag=AB162_448 NZ_CP011787.1 Protein Homology CDS 451070 455095 . + 0 ID=cds396;Parent=gene430;Dbxref=Genbank:WP_053097104.1;Name=WP_053097104.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_053097104.1;transl_table=11 NZ_CP011787.1 RefSeq gene 455171 459394 . + . ID=gene431;Name=AB162_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02160;old_locus_tag=AB162_449 NZ_CP011787.1 Protein Homology CDS 455171 459394 . + 0 ID=cds397;Parent=gene431;Dbxref=Genbank:WP_053097106.1;Name=WP_053097106.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_053097106.1;transl_table=11 NZ_CP011787.1 RefSeq gene 459422 460447 . + . ID=gene432;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AB162_RS02165;old_locus_tag=AB162_450 NZ_CP011787.1 Protein Homology CDS 459422 460447 . + 0 ID=cds398;Parent=gene432;Dbxref=Genbank:WP_053097108.1;Name=WP_053097108.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_053097108.1;transl_table=11 NZ_CP011787.1 RefSeq gene 460425 461423 . + . ID=gene433;Name=AB162_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02170;old_locus_tag=AB162_451 NZ_CP011787.1 Protein Homology CDS 460425 461423 . + 0 ID=cds399;Parent=gene433;Dbxref=Genbank:WP_053097110.1;Name=WP_053097110.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097110.1;transl_table=11 NZ_CP011787.1 RefSeq repeat_region 461426 464693 . + . ID=id38;gbkey=repeat_region NZ_CP011787.1 RefSeq gene 461473 461589 . - . ID=gene434;Name=AB162_RS02175;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB162_RS02175;old_locus_tag=AB162_452 NZ_CP011787.1 cmsearch rRNA 461473 461589 . - . ID=rna34;Parent=gene434;gbkey=rRNA;product=5S ribosomal RNA NZ_CP011787.1 cmsearch exon 461473 461589 . - . ID=id39;Parent=rna34;gbkey=rRNA;product=5S ribosomal RNA NZ_CP011787.1 RefSeq gene 461615 464571 . - . ID=gene435;Name=AB162_RS02180;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB162_RS02180;old_locus_tag=AB162_453 NZ_CP011787.1 RefSeq rRNA 461615 464571 . - . ID=rna35;Parent=gene435;gbkey=rRNA;product=23S ribosomal RNA NZ_CP011787.1 RefSeq exon 461615 464571 . - . ID=id40;Parent=rna35;gbkey=rRNA;product=23S ribosomal RNA NZ_CP011787.1 RefSeq repeat_region 464702 466604 . + . ID=id41;gbkey=repeat_region NZ_CP011787.1 RefSeq gene 464778 466334 . - . ID=gene436;Name=AB162_RS02185;gbkey=Gene;gene_biotype=rRNA;locus_tag=AB162_RS02185;old_locus_tag=AB162_454 NZ_CP011787.1 RefSeq rRNA 464778 466334 . - . ID=rna36;Parent=gene436;gbkey=rRNA;product=16S ribosomal RNA NZ_CP011787.1 RefSeq exon 464778 466334 . - . ID=id42;Parent=rna36;gbkey=rRNA;product=16S ribosomal RNA NZ_CP011787.1 RefSeq gene 466667 468100 . - . ID=gene437;Name=AB162_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02190;old_locus_tag=AB162_455 NZ_CP011787.1 Protein Homology CDS 466667 468100 . - 0 ID=cds400;Parent=gene437;Dbxref=Genbank:WP_053097111.1;Name=WP_053097111.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;product=dihydrolipoamide dehydrogenase;protein_id=WP_053097111.1;transl_table=11 NZ_CP011787.1 RefSeq gene 468157 469470 . - . ID=gene438;Name=AB162_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02195;old_locus_tag=AB162_456 NZ_CP011787.1 Protein Homology CDS 468157 469470 . - 0 ID=cds401;Parent=gene438;Dbxref=Genbank:WP_053097112.1;Name=WP_053097112.1;gbkey=CDS;product=branched-chain alpha-keto acid dehydrogenase subunit E2;protein_id=WP_053097112.1;transl_table=11 NZ_CP011787.1 RefSeq gene 469486 472158 . - . ID=gene439;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AB162_RS02200;old_locus_tag=AB162_457 NZ_CP011787.1 Protein Homology CDS 469486 472158 . - 0 ID=cds402;Parent=gene439;Dbxref=Genbank:WP_053097113.1;Name=WP_053097113.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase;protein_id=WP_053097113.1;transl_table=11 NZ_CP011787.1 RefSeq gene 472290 473180 . + . ID=gene440;Name=AB162_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02205;old_locus_tag=AB162_458 NZ_CP011787.1 Protein Homology CDS 472290 473180 . + 0 ID=cds403;Parent=gene440;Dbxref=Genbank:WP_053097115.1;Name=WP_053097115.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;product=nicotinate-nucleotide pyrophosphorylase;protein_id=WP_053097115.1;transl_table=11 NZ_CP011787.1 RefSeq gene 473209 473832 . + . ID=gene441;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AB162_RS02210;old_locus_tag=AB162_459 NZ_CP011787.1 Protein Homology CDS 473209 473832 . + 0 ID=cds404;Parent=gene441;Dbxref=Genbank:WP_053097117.1;Name=WP_053097117.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=WP_053097117.1;transl_table=11 NZ_CP011787.1 RefSeq gene 473964 476483 . - . ID=gene442;Name=secA;gbkey=Gene;gene=secA;gene_biotype=pseudogene;gene_synonym=azi,div;locus_tag=AB162_RS02215;old_locus_tag=AB162_460;partial=true;pseudo=true;start_range=.,473964 NZ_CP011787.1 Protein Homology CDS 473964 476483 . - 0 ID=cds405;Parent=gene442;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;exception=unextendable partial coding region;gbkey=CDS;gene=secA;partial=true;product=preprotein translocase subunit SecA;pseudo=true;start_range=.,473964;transl_table=11 NZ_CP011787.1 RefSeq gene 476833 477345 . + . ID=gene443;Name=AB162_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02220;old_locus_tag=AB162_461 NZ_CP011787.1 Protein Homology CDS 476833 477345 . + 0 ID=cds406;Parent=gene443;Dbxref=Genbank:WP_053097119.1;Name=WP_053097119.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097119.1;transl_table=11 NZ_CP011787.1 RefSeq gene 477403 478560 . - . ID=gene444;Name=AB162_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02225;old_locus_tag=AB162_462 NZ_CP011787.1 Protein Homology CDS 477403 478560 . - 0 ID=cds407;Parent=gene444;Dbxref=Genbank:WP_053097121.1;Name=WP_053097121.1;Note=GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function;gbkey=CDS;product=cell division protein FtsZ;protein_id=WP_053097121.1;transl_table=11 NZ_CP011787.1 RefSeq gene 478579 479844 . - . ID=gene445;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AB162_RS02230;old_locus_tag=AB162_463 NZ_CP011787.1 Protein Homology CDS 478579 479844 . - 0 ID=cds408;Parent=gene445;Dbxref=Genbank:WP_053097124.1;Name=WP_053097124.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=WP_053097124.1;transl_table=11 NZ_CP011787.1 RefSeq gene 479883 480563 . - . ID=gene446;Name=AB162_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02235;old_locus_tag=AB162_464 NZ_CP011787.1 Protein Homology CDS 479883 480563 . - 0 ID=cds409;Parent=gene446;Dbxref=Genbank:WP_053097125.1;Name=WP_053097125.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097125.1;transl_table=11 NZ_CP011787.1 RefSeq gene 480693 482123 . - . ID=gene447;Name=AB162_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02240;old_locus_tag=AB162_465 NZ_CP011787.1 Protein Homology CDS 480693 482123 . - 0 ID=cds410;Parent=gene447;Dbxref=Genbank:WP_053097399.1;Name=WP_053097399.1;gbkey=CDS;product=UDP-N-acetylmuramate--alanine ligase;protein_id=WP_053097399.1;transl_table=11 NZ_CP011787.1 RefSeq gene 482217 483278 . - . ID=gene448;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AB162_RS02245;old_locus_tag=AB162_466 NZ_CP011787.1 Protein Homology CDS 482217 483278 . - 0 ID=cds411;Parent=gene448;Dbxref=Genbank:WP_053097127.1;Name=WP_053097127.1;Note=N-acetylglucosaminyl transferase%3B UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_053097127.1;transl_table=11 NZ_CP011787.1 RefSeq gene 483290 484483 . - . ID=gene449;Name=AB162_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02250;old_locus_tag=AB162_467 NZ_CP011787.1 Protein Homology CDS 483290 484483 . - 0 ID=cds412;Parent=gene449;Dbxref=Genbank:WP_053097129.1;Name=WP_053097129.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;product=cell division protein FtsW;protein_id=WP_053097129.1;transl_table=11 NZ_CP011787.1 RefSeq gene 484483 485817 . - . ID=gene450;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AB162_RS02255;old_locus_tag=AB162_468 NZ_CP011787.1 Protein Homology CDS 484483 485817 . - 0 ID=cds413;Parent=gene450;Dbxref=Genbank:WP_053097131.1;Name=WP_053097131.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;protein_id=WP_053097131.1;transl_table=11 NZ_CP011787.1 RefSeq gene 485830 486924 . - . ID=gene451;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AB162_RS02260;old_locus_tag=AB162_469 NZ_CP011787.1 Protein Homology CDS 485830 486924 . - 0 ID=cds414;Parent=gene451;Dbxref=Genbank:WP_053097135.1;Name=WP_053097135.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_053097135.1;transl_table=11 NZ_CP011787.1 RefSeq gene 486918 488294 . - . ID=gene452;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AB162_RS02265;old_locus_tag=AB162_470 NZ_CP011787.1 Protein Homology CDS 486918 488294 . - 0 ID=cds415;Parent=gene452;Dbxref=Genbank:WP_053097137.1;Name=WP_053097137.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_053097137.1;transl_table=11 NZ_CP011787.1 RefSeq gene 488303 489787 . - . ID=gene453;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=AB162_RS02270;old_locus_tag=AB162_471 NZ_CP011787.1 Protein Homology CDS 488303 489787 . - 0 ID=cds416;Parent=gene453;Dbxref=Genbank:WP_053097139.1;Name=WP_053097139.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_053097139.1;transl_table=11 NZ_CP011787.1 RefSeq gene 489815 491542 . - . ID=gene454;Name=AB162_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02275;old_locus_tag=AB162_472 NZ_CP011787.1 Protein Homology CDS 489815 491542 . - 0 ID=cds417;Parent=gene454;Dbxref=Genbank:WP_053097141.1;Name=WP_053097141.1;Note=penicillin-binding protein 3%3B transpeptidase involved in septal peptidoglycan synthesis;gbkey=CDS;product=cell division protein FtsI;protein_id=WP_053097141.1;transl_table=11 NZ_CP011787.1 RefSeq gene 491583 491900 . - . ID=gene455;Name=AB162_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02280;old_locus_tag=AB162_473 NZ_CP011787.1 Protein Homology CDS 491583 491900 . - 0 ID=cds418;Parent=gene455;Dbxref=Genbank:WP_053097142.1;Name=WP_053097142.1;gbkey=CDS;product=cell division protein FtsL;protein_id=WP_053097142.1;transl_table=11 NZ_CP011787.1 RefSeq gene 491914 492879 . - . ID=gene456;Name=AB162_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02285;old_locus_tag=AB162_474 NZ_CP011787.1 Protein Homology CDS 491914 492879 . - 0 ID=cds419;Parent=gene456;Dbxref=Genbank:WP_053097144.1;Name=WP_053097144.1;gbkey=CDS;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=WP_053097144.1;transl_table=11 NZ_CP011787.1 RefSeq gene 493356 494147 . - . ID=gene457;Name=AB162_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02290;old_locus_tag=AB162_475 NZ_CP011787.1 Protein Homology CDS 493356 494147 . - 0 ID=cds420;Parent=gene457;Dbxref=Genbank:WP_053097147.1;Name=WP_053097147.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;product=methionine aminopeptidase;protein_id=WP_053097147.1;transl_table=11 NZ_CP011787.1 RefSeq gene 494461 495180 . + . ID=gene458;Name=AB162_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02295;old_locus_tag=AB162_476 NZ_CP011787.1 Protein Homology CDS 494461 495180 . + 0 ID=cds421;Parent=gene458;Dbxref=Genbank:WP_053097149.1;Name=WP_053097149.1;gbkey=CDS;product=30S ribosomal protein S2;protein_id=WP_053097149.1;transl_table=11 NZ_CP011787.1 RefSeq gene 495259 496080 . + . ID=gene459;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AB162_RS02300;old_locus_tag=AB162_477 NZ_CP011787.1 Protein Homology CDS 495259 496080 . + 0 ID=cds422;Parent=gene459;Dbxref=Genbank:WP_053097151.1;Name=WP_053097151.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=WP_053097151.1;transl_table=11 NZ_CP011787.1 RefSeq gene 496173 496898 . + . ID=gene460;Name=AB162_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02305;old_locus_tag=AB162_478 NZ_CP011787.1 Protein Homology CDS 496173 496898 . + 0 ID=cds423;Parent=gene460;Dbxref=Genbank:WP_053097152.1;Name=WP_053097152.1;gbkey=CDS;product=uridylate kinase;protein_id=WP_053097152.1;transl_table=11 NZ_CP011787.1 RefSeq gene 496936 497493 . + . ID=gene461;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AB162_RS02310;old_locus_tag=AB162_479 NZ_CP011787.1 Protein Homology CDS 496936 497493 . + 0 ID=cds424;Parent=gene461;Dbxref=Genbank:WP_053097153.1;Name=WP_053097153.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=WP_053097153.1;transl_table=11 NZ_CP011787.1 RefSeq gene 497605 498801 . + . ID=gene462;Name=AB162_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02315;old_locus_tag=AB162_480 NZ_CP011787.1 Protein Homology CDS 497605 498801 . + 0 ID=cds425;Parent=gene462;Dbxref=Genbank:WP_053097154.1;Name=WP_053097154.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=WP_053097154.1;transl_table=11 NZ_CP011787.1 RefSeq gene 498941 499699 . + . ID=gene463;Name=AB162_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02320;old_locus_tag=AB162_481 NZ_CP011787.1 Protein Homology CDS 498941 499699 . + 0 ID=cds426;Parent=gene463;Dbxref=Genbank:WP_053097159.1;Name=WP_053097159.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;product=UDP pyrophosphate synthase;protein_id=WP_053097159.1;transl_table=11 NZ_CP011787.1 RefSeq gene 499709 500551 . + . ID=gene464;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=AB162_RS02325;old_locus_tag=AB162_482 NZ_CP011787.1 Protein Homology CDS 499709 500551 . + 0 ID=cds427;Parent=gene464;Dbxref=Genbank:WP_053097161.1;Name=WP_053097161.1;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthetase;protein_id=WP_053097161.1;transl_table=11 NZ_CP011787.1 RefSeq gene 500581 501939 . + . ID=gene465;Name=AB162_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02330;old_locus_tag=AB162_483 NZ_CP011787.1 Protein Homology CDS 500581 501939 . + 0 ID=cds428;Parent=gene465;Dbxref=Genbank:WP_053097162.1;Name=WP_053097162.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;product=zinc metallopeptidase RseP;protein_id=WP_053097162.1;transl_table=11 NZ_CP011787.1 RefSeq gene 501941 504355 . + . ID=gene466;Name=AB162_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02335;old_locus_tag=AB162_484 NZ_CP011787.1 Protein Homology CDS 501941 504355 . + 0 ID=cds429;Parent=gene466;Dbxref=Genbank:WP_053097164.1;Name=WP_053097164.1;Note=part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins;gbkey=CDS;product=outer membrane assembly protein;protein_id=WP_053097164.1;transl_table=11 NZ_CP011787.1 RefSeq gene 504426 504923 . + . ID=gene467;Name=AB162_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02340;old_locus_tag=AB162_485 NZ_CP011787.1 Protein Homology CDS 504426 504923 . + 0 ID=cds430;Parent=gene467;Dbxref=Genbank:WP_053097166.1;Name=WP_053097166.1;gbkey=CDS;product=molecular chaperone;protein_id=WP_053097166.1;transl_table=11 NZ_CP011787.1 RefSeq gene 505122 505571 . + . ID=gene468;Name=AB162_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02345;old_locus_tag=AB162_486 NZ_CP011787.1 Protein Homology CDS 505122 505571 . + 0 ID=cds431;Parent=gene468;Dbxref=Genbank:WP_053097167.1;Name=WP_053097167.1;gbkey=CDS;product=3-hydroxyacyl-ACP dehydratase;protein_id=WP_053097167.1;transl_table=11 NZ_CP011787.1 RefSeq gene 505697 509188 . + . ID=gene469;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AB162_RS02350;old_locus_tag=AB162_487 NZ_CP011787.1 Protein Homology CDS 505697 509188 . + 0 ID=cds432;Parent=gene469;Dbxref=Genbank:WP_053097168.1;Name=WP_053097168.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=WP_053097168.1;transl_table=11 NZ_CP011787.1 RefSeq gene 509217 510176 . + . ID=gene470;Name=AB162_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02355;old_locus_tag=AB162_488 NZ_CP011787.1 Protein Homology CDS 509217 510176 . + 0 ID=cds433;Parent=gene470;Dbxref=Genbank:WP_053097170.1;Name=WP_053097170.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;product=acetyl-CoA carboxylase subunit alpha;protein_id=WP_053097170.1;transl_table=11 NZ_CP011787.1 RefSeq gene 511191 511880 . + . ID=gene471;Name=AB162_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02360;old_locus_tag=AB162_489 NZ_CP011787.1 Protein Homology CDS 511191 511880 . + 0 ID=cds434;Parent=gene471;Dbxref=Genbank:WP_053097171.1;Name=WP_053097171.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097171.1;transl_table=11 NZ_CP011787.1 RefSeq gene 511965 512450 . + . ID=gene472;Name=AB162_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02365;old_locus_tag=AB162_490 NZ_CP011787.1 Protein Homology CDS 511965 512450 . + 0 ID=cds435;Parent=gene472;Dbxref=Genbank:WP_053097172.1;Name=WP_053097172.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;product=RNA pyrophosphohydrolase;protein_id=WP_053097172.1;transl_table=11 NZ_CP011787.1 RefSeq gene 512562 513428 . + . ID=gene473;Name=AB162_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02370;old_locus_tag=AB162_491 NZ_CP011787.1 Protein Homology CDS 512562 513428 . + 0 ID=cds436;Parent=gene473;Dbxref=Genbank:WP_053097178.1;Name=WP_053097178.1;gbkey=CDS;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_053097178.1;transl_table=11 NZ_CP011787.1 RefSeq gene 513451 514245 . + . ID=gene474;Name=AB162_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02375;old_locus_tag=AB162_492 NZ_CP011787.1 Protein Homology CDS 513451 514245 . + 0 ID=cds437;Parent=gene474;Dbxref=Genbank:WP_053097180.1;Name=WP_053097180.1;gbkey=CDS;product=thymidylate synthase;protein_id=WP_053097180.1;transl_table=11 NZ_CP011787.1 RefSeq gene 514285 517611 . + . ID=gene475;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AB162_RS02380;old_locus_tag=AB162_493 NZ_CP011787.1 Protein Homology CDS 514285 517611 . + 0 ID=cds438;Parent=gene475;Dbxref=Genbank:WP_053097182.1;Name=WP_053097182.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=WP_053097182.1;transl_table=11 NZ_CP011787.1 RefSeq gene 517718 521308 . + . ID=gene476;Name=AB162_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02385;old_locus_tag=AB162_494 NZ_CP011787.1 Protein Homology CDS 517718 521308 . + 0 ID=cds439;Parent=gene476;Dbxref=Genbank:WP_053097401.1;Name=WP_053097401.1;gbkey=CDS;product=exodeoxyribonuclease V subunit beta;protein_id=WP_053097401.1;transl_table=11 NZ_CP011787.1 RefSeq gene 521381 523294 . + . ID=gene477;Name=AB162_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02390;old_locus_tag=AB162_495 NZ_CP011787.1 Protein Homology CDS 521381 523294 . + 0 ID=cds440;Parent=gene477;Dbxref=Genbank:WP_053097184.1;Name=WP_053097184.1;gbkey=CDS;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_053097184.1;transl_table=11 NZ_CP011787.1 RefSeq gene 523500 524133 . + . ID=gene478;Name=AB162_RS02395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS02395;old_locus_tag=AB162_496;pseudo=true NZ_CP011787.1 Protein Homology CDS 523500 524133 . + 0 ID=cds441;Parent=gene478;Note=cAMP receptor protein%3B complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;exception=annotated by transcript or proteomic data;gbkey=CDS;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 525012 526412 . + . ID=gene479;Name=AB162_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02400;old_locus_tag=AB162_497 NZ_CP011787.1 Protein Homology CDS 525012 526412 . + 0 ID=cds442;Parent=gene479;Dbxref=Genbank:WP_053097186.1;Name=WP_053097186.1;Note=unwinds double stranded DNA;gbkey=CDS;product=DNA helicase;protein_id=WP_053097186.1;transl_table=11 NZ_CP011787.1 RefSeq gene 526447 526522 . + . ID=gene480;Name=AB162_RS02405;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS02405;old_locus_tag=AB162_498 NZ_CP011787.1 tRNAscan-SE tRNA 526447 526522 . + . ID=rna37;Parent=gene480;anticodon=(pos:526481..526483);gbkey=tRNA;product=tRNA-Arg NZ_CP011787.1 tRNAscan-SE exon 526447 526522 . + . ID=id43;Parent=rna37;anticodon=(pos:526481..526483);gbkey=tRNA;product=tRNA-Arg NZ_CP011787.1 RefSeq gene 526799 528694 . + . ID=gene481;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AB162_RS02410;old_locus_tag=AB162_499 NZ_CP011787.1 Protein Homology CDS 526799 528694 . + 0 ID=cds443;Parent=gene481;Dbxref=Genbank:WP_053097188.1;Name=WP_053097188.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=WP_053097188.1;transl_table=11 NZ_CP011787.1 RefSeq gene 528801 529921 . + . ID=gene482;Name=AB162_RS02415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS02415;old_locus_tag=AB162_500;pseudo=true NZ_CP011787.1 Protein Homology CDS 528801 529921 . + 0 ID=cds444;Parent=gene482;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;exception=annotated by transcript or proteomic data;gbkey=CDS;product=molecular chaperone DnaJ;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 529945 530205 . - . ID=gene483;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AB162_RS02420;old_locus_tag=AB162_501 NZ_CP011787.1 Protein Homology CDS 529945 530205 . - 0 ID=cds445;Parent=gene483;Dbxref=Genbank:WP_053097190.1;Name=WP_053097190.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=WP_053097190.1;transl_table=11 NZ_CP011787.1 RefSeq gene 530362 531309 . + . ID=gene484;Name=AB162_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02425;old_locus_tag=AB162_502 NZ_CP011787.1 Protein Homology CDS 530362 531309 . + 0 ID=cds446;Parent=gene484;Dbxref=Genbank:WP_053097191.1;Name=WP_053097191.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097191.1;transl_table=11 NZ_CP011787.1 RefSeq gene 531345 534167 . + . ID=gene485;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AB162_RS02430;old_locus_tag=AB162_503 NZ_CP011787.1 Protein Homology CDS 531345 534167 . + 0 ID=cds447;Parent=gene485;Dbxref=Genbank:WP_053097193.1;Name=WP_053097193.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;product=isoleucine--tRNA ligase;protein_id=WP_053097193.1;transl_table=11 NZ_CP011787.1 RefSeq gene 534203 534709 . + . ID=gene486;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AB162_RS02435;old_locus_tag=AB162_504 NZ_CP011787.1 Protein Homology CDS 534203 534709 . + 0 ID=cds448;Parent=gene486;Dbxref=Genbank:WP_053097403.1;Name=WP_053097403.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=WP_053097403.1;transl_table=11 NZ_CP011787.1 RefSeq gene 534718 535665 . + . ID=gene487;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AB162_RS02440;old_locus_tag=AB162_505 NZ_CP011787.1 Protein Homology CDS 534718 535665 . + 0 ID=cds449;Parent=gene487;Dbxref=Genbank:WP_053097198.1;Name=WP_053097198.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_053097198.1;transl_table=11 NZ_CP011787.1 RefSeq gene 535854 537050 . + . ID=gene488;Name=AB162_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02445;old_locus_tag=AB162_506 NZ_CP011787.1 Protein Homology CDS 535854 537050 . + 0 ID=cds450;Parent=gene488;Dbxref=Genbank:WP_053097200.1;Name=WP_053097200.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;product=carbamoyl phosphate synthase small subunit;protein_id=WP_053097200.1;transl_table=11 NZ_CP011787.1 RefSeq gene 537066 540323 . + . ID=gene489;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AB162_RS02450;old_locus_tag=AB162_507 NZ_CP011787.1 Protein Homology CDS 537066 540323 . + 0 ID=cds451;Parent=gene489;Dbxref=Genbank:WP_053097202.1;Name=WP_053097202.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=WP_053097202.1;transl_table=11 NZ_CP011787.1 RefSeq gene 540367 540861 . + . ID=gene490;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=AB162_RS02455;old_locus_tag=AB162_508 NZ_CP011787.1 Protein Homology CDS 540367 540861 . + 0 ID=cds452;Parent=gene490;Dbxref=Genbank:WP_053097204.1;Name=WP_053097204.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=WP_053097204.1;transl_table=11 NZ_CP011787.1 RefSeq gene 540897 541730 . - . ID=gene491;Name=AB162_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02460;old_locus_tag=AB162_509 NZ_CP011787.1 Protein Homology CDS 540897 541730 . - 0 ID=cds453;Parent=gene491;Dbxref=Genbank:WP_053097206.1;Name=WP_053097206.1;gbkey=CDS;product=diadenosine tetraphosphatase;protein_id=WP_053097206.1;transl_table=11 NZ_CP011787.1 RefSeq gene 541872 542669 . - . ID=gene492;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=AB162_RS02465;old_locus_tag=AB162_510 NZ_CP011787.1 Protein Homology CDS 541872 542669 . - 0 ID=cds454;Parent=gene492;Dbxref=Genbank:WP_053097208.1;Name=WP_053097208.1;Note=in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin%3B members of this protein family have secondary functions;gbkey=CDS;gene=ksgA;product=16S rRNA methyltransferase;protein_id=WP_053097208.1;transl_table=11 NZ_CP011787.1 RefSeq gene 542790 543914 . - . ID=gene493;Name=AB162_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02470;old_locus_tag=AB162_511 NZ_CP011787.1 Protein Homology CDS 542790 543914 . - 0 ID=cds455;Parent=gene493;Dbxref=Genbank:WP_053097210.1;Name=WP_053097210.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097210.1;transl_table=11 NZ_CP011787.1 RefSeq gene 544271 544603 . + . ID=gene494;Name=AB162_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02475 NZ_CP011787.1 Protein Homology CDS 544271 544603 . + 0 ID=cds456;Parent=gene494;Dbxref=Genbank:WP_053097212.1;Name=WP_053097212.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097212.1;transl_table=11 NZ_CP011787.1 RefSeq gene 544682 544954 . - . ID=gene495;Name=AB162_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02480;old_locus_tag=AB162_513 NZ_CP011787.1 Protein Homology CDS 544682 544954 . - 0 ID=cds457;Parent=gene495;Dbxref=Genbank:WP_053097214.1;Name=WP_053097214.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097214.1;transl_table=11 NZ_CP011787.1 RefSeq gene 544947 545384 . - . ID=gene496;Name=AB162_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02485;old_locus_tag=AB162_515 NZ_CP011787.1 Protein Homology CDS 544947 545384 . - 0 ID=cds458;Parent=gene496;Dbxref=Genbank:WP_053097218.1;Name=WP_053097218.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097218.1;transl_table=11 NZ_CP011787.1 RefSeq gene 545455 545936 . + . ID=gene497;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=pseudogene;locus_tag=AB162_RS02490;old_locus_tag=AB162_516;pseudo=true NZ_CP011787.1 Protein Homology CDS 545455 545936 . + 0 ID=cds459;Parent=gene497;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=smpB;product=SsrA-binding protein;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 546548 547006 . - . ID=gene498;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AB162_RS02495;old_locus_tag=AB162_518 NZ_CP011787.1 Protein Homology CDS 546548 547006 . - 0 ID=cds460;Parent=gene498;Dbxref=Genbank:WP_053097220.1;Name=WP_053097220.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=WP_053097220.1;transl_table=11 NZ_CP011787.1 RefSeq gene 547082 547309 . - . ID=gene499;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AB162_RS02500;old_locus_tag=AB162_519 NZ_CP011787.1 Protein Homology CDS 547082 547309 . - 0 ID=cds461;Parent=gene499;Dbxref=Genbank:WP_053097222.1;Name=WP_053097222.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=WP_053097222.1;transl_table=11 NZ_CP011787.1 RefSeq gene 547332 547643 . - . ID=gene500;Name=AB162_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02505;old_locus_tag=AB162_520 NZ_CP011787.1 Protein Homology CDS 547332 547643 . - 0 ID=cds462;Parent=gene500;Dbxref=Genbank:WP_053097224.1;Name=WP_053097224.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;product=primosomal replication protein N;protein_id=WP_053097224.1;transl_table=11 NZ_CP011787.1 RefSeq gene 547643 548053 . - . ID=gene501;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AB162_RS02510;old_locus_tag=AB162_521 NZ_CP011787.1 Protein Homology CDS 547643 548053 . - 0 ID=cds463;Parent=gene501;Dbxref=Genbank:WP_053097226.1;Name=WP_053097226.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=WP_053097226.1;transl_table=11 NZ_CP011787.1 RefSeq gene 548249 549028 . - . ID=gene502;Name=AB162_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02515;old_locus_tag=AB162_522 NZ_CP011787.1 Protein Homology CDS 548249 549028 . - 0 ID=cds464;Parent=gene502;Dbxref=Genbank:WP_053097228.1;Name=WP_053097228.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;product=23S rRNA methyltransferase;protein_id=WP_053097228.1;transl_table=11 NZ_CP011787.1 RefSeq gene 549094 551181 . - . ID=gene503;Name=AB162_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02520;old_locus_tag=AB162_523 NZ_CP011787.1 Protein Homology CDS 549094 551181 . - 0 ID=cds465;Parent=gene503;Dbxref=Genbank:WP_053097230.1;Name=WP_053097230.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;product=exoribonuclease R;protein_id=WP_053097230.1;transl_table=11 NZ_CP011787.1 RefSeq gene 551451 552755 . - . ID=gene504;Name=AB162_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02525;old_locus_tag=AB162_524 NZ_CP011787.1 Protein Homology CDS 551451 552755 . - 0 ID=cds466;Parent=gene504;Dbxref=Genbank:WP_053097232.1;Name=WP_053097232.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;product=adenylosuccinate synthetase;protein_id=WP_053097232.1;transl_table=11 NZ_CP011787.1 RefSeq gene 552893 553921 . - . ID=gene505;Name=AB162_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02530;old_locus_tag=AB162_525 NZ_CP011787.1 Protein Homology CDS 552893 553921 . - 0 ID=cds467;Parent=gene505;Dbxref=Genbank:WP_053097234.1;Name=WP_053097234.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_053097234.1;transl_table=11 NZ_CP011787.1 RefSeq gene 553928 555112 . - . ID=gene506;Name=AB162_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02535;old_locus_tag=AB162_526 NZ_CP011787.1 Protein Homology CDS 553928 555112 . - 0 ID=cds468;Parent=gene506;Dbxref=Genbank:WP_053097236.1;Name=WP_053097236.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;product=cell division protein FtsH;protein_id=WP_053097236.1;transl_table=11 NZ_CP011787.1 RefSeq gene 555181 556467 . - . ID=gene507;Name=AB162_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02540;old_locus_tag=AB162_527 NZ_CP011787.1 Protein Homology CDS 555181 556467 . - 0 ID=cds469;Parent=gene507;Dbxref=Genbank:WP_053097238.1;Name=WP_053097238.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;product=GTPase HflX;protein_id=WP_053097238.1;transl_table=11 NZ_CP011787.1 RefSeq gene 556725 557675 . - . ID=gene508;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AB162_RS02545;old_locus_tag=AB162_528 NZ_CP011787.1 Protein Homology CDS 556725 557675 . - 0 ID=cds470;Parent=gene508;Dbxref=Genbank:WP_053097240.1;Name=WP_053097240.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA delta(2)-isopentenylpyrophosphate transferase;protein_id=WP_053097240.1;transl_table=11 NZ_CP011787.1 RefSeq gene 557668 559443 . - . ID=gene509;Name=AB162_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02550;old_locus_tag=AB162_529 NZ_CP011787.1 Protein Homology CDS 557668 559443 . - 0 ID=cds471;Parent=gene509;Dbxref=Genbank:WP_053097242.1;Name=WP_053097242.1;gbkey=CDS;product=DNA mismatch repair protein;protein_id=WP_053097242.1;transl_table=11 NZ_CP011787.1 RefSeq gene 559534 560760 . - . ID=gene510;Name=AB162_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02555;old_locus_tag=AB162_530 NZ_CP011787.1 Protein Homology CDS 559534 560760 . - 0 ID=cds472;Parent=gene510;Dbxref=Genbank:WP_053097243.1;Name=WP_053097243.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097243.1;transl_table=11 NZ_CP011787.1 RefSeq gene 560832 561299 . - . ID=gene511;Name=AB162_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02560;old_locus_tag=AB162_531 NZ_CP011787.1 Protein Homology CDS 560832 561299 . - 0 ID=cds473;Parent=gene511;Dbxref=Genbank:WP_053097245.1;Name=WP_053097245.1;gbkey=CDS;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=WP_053097245.1;transl_table=11 NZ_CP011787.1 RefSeq gene 561322 561879 . - . ID=gene512;Name=AB162_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02565;old_locus_tag=AB162_532 NZ_CP011787.1 Protein Homology CDS 561322 561879 . - 0 ID=cds474;Parent=gene512;Dbxref=Genbank:WP_053097248.1;Name=WP_053097248.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;product=oligoribonuclease;protein_id=WP_053097248.1;transl_table=11 NZ_CP011787.1 RefSeq gene 562119 563003 . + . ID=gene513;Name=AB162_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02570;old_locus_tag=AB162_533 NZ_CP011787.1 Protein Homology CDS 562119 563003 . + 0 ID=cds475;Parent=gene513;Dbxref=Genbank:WP_053097250.1;Name=WP_053097250.1;gbkey=CDS;product=phosphatidylserine decarboxylase;protein_id=WP_053097250.1;transl_table=11 NZ_CP011787.1 RefSeq gene 563020 566343 . + . ID=gene514;Name=AB162_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02575;old_locus_tag=AB162_534 NZ_CP011787.1 Protein Homology CDS 563020 566343 . + 0 ID=cds476;Parent=gene514;Dbxref=Genbank:WP_053097252.1;Name=WP_053097252.1;gbkey=CDS;product=mechanosensitive channel protein;protein_id=WP_053097252.1;transl_table=11 NZ_CP011787.1 RefSeq gene 566375 567382 . - . ID=gene515;Name=AB162_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02580;old_locus_tag=AB162_535 NZ_CP011787.1 Protein Homology CDS 566375 567382 . - 0 ID=cds477;Parent=gene515;Dbxref=Genbank:WP_053097255.1;Name=WP_053097255.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;product=poxB regulator PoxA;protein_id=WP_053097255.1;transl_table=11 NZ_CP011787.1 RefSeq gene 567437 568003 . - . ID=gene516;Name=AB162_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02585;old_locus_tag=AB162_536 NZ_CP011787.1 Protein Homology CDS 567437 568003 . - 0 ID=cds478;Parent=gene516;Dbxref=Genbank:WP_053097257.1;Name=WP_053097257.1;gbkey=CDS;product=elongation factor P;protein_id=WP_053097257.1;transl_table=11 NZ_CP011787.1 RefSeq gene 568065 569090 . + . ID=gene517;Name=AB162_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02590;old_locus_tag=AB162_537 NZ_CP011787.1 Protein Homology CDS 568065 569090 . + 0 ID=cds479;Parent=gene517;Dbxref=Genbank:WP_053097258.1;Name=WP_053097258.1;gbkey=CDS;product=EF-P beta-lysylation protein EpmB;protein_id=WP_053097258.1;transl_table=11 NZ_CP011787.1 RefSeq gene 569227 570876 . - . ID=gene518;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=AB162_RS02595;old_locus_tag=AB162_538 NZ_CP011787.1 Protein Homology CDS 569227 570876 . - 0 ID=cds480;Parent=gene518;Dbxref=Genbank:WP_053097260.1;Name=WP_053097260.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=WP_053097260.1;transl_table=11 NZ_CP011787.1 RefSeq gene 570920 571213 . - . ID=gene519;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=AB162_RS02600;old_locus_tag=AB162_539 NZ_CP011787.1 Protein Homology CDS 570920 571213 . - 0 ID=cds481;Parent=gene519;Dbxref=Genbank:WP_053097262.1;Name=WP_053097262.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=molecular chaperone GroES;protein_id=WP_053097262.1;transl_table=11 NZ_CP011787.1 RefSeq gene 571475 572896 . + . ID=gene520;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AB162_RS02605;old_locus_tag=AB162_540 NZ_CP011787.1 Protein Homology CDS 571475 572896 . + 0 ID=cds482;Parent=gene520;Dbxref=Genbank:WP_053097264.1;Name=WP_053097264.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=WP_053097264.1;transl_table=11 NZ_CP011787.1 RefSeq gene 572980 573052 . + . ID=gene521;Name=AB162_RS02610;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS02610;old_locus_tag=AB162_541 NZ_CP011787.1 tRNAscan-SE tRNA 572980 573052 . + . ID=rna38;Parent=gene521;anticodon=(pos:573013..573015);gbkey=tRNA;product=tRNA-Phe NZ_CP011787.1 tRNAscan-SE exon 572980 573052 . + . ID=id44;Parent=rna38;anticodon=(pos:573013..573015);gbkey=tRNA;product=tRNA-Phe NZ_CP011787.1 RefSeq gene 573242 573844 . - . ID=gene522;Name=AB162_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02615;old_locus_tag=AB162_542 NZ_CP011787.1 Protein Homology CDS 573242 573844 . - 0 ID=cds483;Parent=gene522;Dbxref=Genbank:WP_053097266.1;Name=WP_053097266.1;gbkey=CDS;product=peroxiredoxin;protein_id=WP_053097266.1;transl_table=11 NZ_CP011787.1 RefSeq gene 574560 574898 . + . ID=gene523;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AB162_RS02620;old_locus_tag=AB162_543 NZ_CP011787.1 Protein Homology CDS 574560 574898 . + 0 ID=cds484;Parent=gene523;Dbxref=Genbank:WP_053097268.1;Name=WP_053097268.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=WP_053097268.1;transl_table=11 NZ_CP011787.1 RefSeq gene 574923 576764 . + . ID=gene524;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AB162_RS02625;old_locus_tag=AB162_544 NZ_CP011787.1 Protein Homology CDS 574923 576764 . + 0 ID=cds485;Parent=gene524;Dbxref=Genbank:WP_053097405.1;Name=WP_053097405.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=WP_053097405.1;transl_table=11 NZ_CP011787.1 RefSeq gene 576773 577726 . + . ID=gene525;Name=AB162_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02630;old_locus_tag=AB162_545 NZ_CP011787.1 Protein Homology CDS 576773 577726 . + 0 ID=cds486;Parent=gene525;Dbxref=Genbank:WP_053097270.1;Name=WP_053097270.1;gbkey=CDS;product=preprotein translocase subunit SecF;protein_id=WP_053097270.1;transl_table=11 NZ_CP011787.1 RefSeq gene 577873 579006 . + . ID=gene526;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AB162_RS02635;old_locus_tag=AB162_546 NZ_CP011787.1 Protein Homology CDS 577873 579006 . + 0 ID=cds487;Parent=gene526;Dbxref=Genbank:WP_053097272.1;Name=WP_053097272.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;product=5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=WP_053097272.1;transl_table=11 NZ_CP011787.1 RefSeq gene 579040 579507 . + . ID=gene527;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AB162_RS02640;old_locus_tag=AB162_547 NZ_CP011787.1 Protein Homology CDS 579040 579507 . + 0 ID=cds488;Parent=gene527;Dbxref=Genbank:WP_053097274.1;Name=WP_053097274.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_053097274.1;transl_table=11 NZ_CP011787.1 RefSeq gene 579536 579955 . + . ID=gene528;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AB162_RS02645;old_locus_tag=AB162_548 NZ_CP011787.1 Protein Homology CDS 579536 579955 . + 0 ID=cds489;Parent=gene528;Dbxref=Genbank:WP_053097276.1;Name=WP_053097276.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=transcription antiterminator NusB;protein_id=WP_053097276.1;transl_table=11 NZ_CP011787.1 RefSeq gene 580111 580608 . + . ID=gene529;Name=AB162_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02650;old_locus_tag=AB162_549 NZ_CP011787.1 Protein Homology CDS 580111 580608 . + 0 ID=cds490;Parent=gene529;Dbxref=Genbank:WP_053097278.1;Name=WP_053097278.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;product=phosphatidylglycerophosphatase;protein_id=WP_053097278.1;transl_table=11 NZ_CP011787.1 RefSeq gene 581612 582169 . - . ID=gene530;Name=AB162_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02655;old_locus_tag=AB162_551 NZ_CP011787.1 Protein Homology CDS 581612 582169 . - 0 ID=cds491;Parent=gene530;Dbxref=Genbank:WP_053097280.1;Name=WP_053097280.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;product=inorganic pyrophosphatase;protein_id=WP_053097280.1;transl_table=11 NZ_CP011787.1 RefSeq gene 582276 584009 . - . ID=gene531;Name=AB162_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02660;old_locus_tag=AB162_552 NZ_CP011787.1 Protein Homology CDS 582276 584009 . - 0 ID=cds492;Parent=gene531;Dbxref=Genbank:WP_053097282.1;Name=WP_053097282.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;product=proline--tRNA ligase;protein_id=WP_053097282.1;transl_table=11 NZ_CP011787.1 RefSeq gene 584162 584243 . - . ID=gene532;Name=AB162_RS02665;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS02665;old_locus_tag=AB162_553 NZ_CP011787.1 tRNAscan-SE tRNA 584162 584243 . - . ID=rna39;Parent=gene532;anticodon=(pos:complement(584207..584209));gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 tRNAscan-SE exon 584162 584243 . - . ID=id45;Parent=rna39;anticodon=(pos:complement(584207..584209));gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 RefSeq gene 584378 585259 . - . ID=gene533;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=AB162_RS02670;old_locus_tag=AB162_554 NZ_CP011787.1 Protein Homology CDS 584378 585259 . - 0 ID=cds493;Parent=gene533;Dbxref=Genbank:WP_053097284.1;Name=WP_053097284.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=inorganic polyphosphate kinase;protein_id=WP_053097284.1;transl_table=11 NZ_CP011787.1 RefSeq gene 585382 585996 . + . ID=gene534;Name=AB162_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02675;old_locus_tag=AB162_555 NZ_CP011787.1 Protein Homology CDS 585382 585996 . + 0 ID=cds494;Parent=gene534;Dbxref=Genbank:WP_053097286.1;Name=WP_053097286.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;product=heat -hock protein GrpE;protein_id=WP_053097286.1;transl_table=11 NZ_CP011787.1 RefSeq gene 586668 588281 . - . ID=gene535;Name=AB162_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02680;old_locus_tag=AB162_557 NZ_CP011787.1 Protein Homology CDS 586668 588281 . - 0 ID=cds495;Parent=gene535;Dbxref=Genbank:WP_053097407.1;Name=WP_053097407.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;product=L-aspartate oxidase;protein_id=WP_053097407.1;transl_table=11 NZ_CP011787.1 RefSeq gene 588326 588398 . - . ID=gene536;Name=AB162_RS02685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS02685;old_locus_tag=AB162_558 NZ_CP011787.1 tRNAscan-SE tRNA 588326 588398 . - . ID=rna40;Parent=gene536;anticodon=(pos:complement(588363..588365));gbkey=tRNA;product=tRNA-Met NZ_CP011787.1 tRNAscan-SE exon 588326 588398 . - . ID=id46;Parent=rna40;anticodon=(pos:complement(588363..588365));gbkey=tRNA;product=tRNA-Met NZ_CP011787.1 RefSeq gene 588465 590348 . - . ID=gene537;Name=AB162_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02690;old_locus_tag=AB162_559 NZ_CP011787.1 Protein Homology CDS 588465 590348 . - 0 ID=cds496;Parent=gene537;Dbxref=Genbank:WP_053097289.1;Name=WP_053097289.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;product=RNA polymerase subunit sigma;protein_id=WP_053097289.1;transl_table=11 NZ_CP011787.1 RefSeq gene 590419 592170 . - . ID=gene538;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AB162_RS02695;old_locus_tag=AB162_560 NZ_CP011787.1 Protein Homology CDS 590419 592170 . - 0 ID=cds497;Parent=gene538;Dbxref=Genbank:WP_053097291.1;Name=WP_053097291.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=WP_053097291.1;transl_table=11 NZ_CP011787.1 RefSeq gene 592243 592458 . - . ID=gene539;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AB162_RS02700;old_locus_tag=AB162_561 NZ_CP011787.1 Protein Homology CDS 592243 592458 . - 0 ID=cds498;Parent=gene539;Dbxref=Genbank:WP_053097293.1;Name=WP_053097293.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=WP_053097293.1;transl_table=11 NZ_CP011787.1 RefSeq gene 592567 593592 . + . ID=gene540;Name=AB162_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02705;old_locus_tag=AB162_562 NZ_CP011787.1 Protein Homology CDS 592567 593592 . + 0 ID=cds499;Parent=gene540;Dbxref=Genbank:WP_053097295.1;Name=WP_053097295.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;product=UGMP family protein;protein_id=WP_053097295.1;transl_table=11 NZ_CP011787.1 RefSeq gene 593725 594081 . + . ID=gene541;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=AB162_RS02710;old_locus_tag=AB162_563 NZ_CP011787.1 Protein Homology CDS 593725 594081 . + 0 ID=cds500;Parent=gene541;Dbxref=Genbank:WP_053097297.1;Name=WP_053097297.1;Note=catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin;gbkey=CDS;gene=folB;product=dihydroneopterin aldolase;protein_id=WP_053097297.1;transl_table=11 NZ_CP011787.1 RefSeq gene 594103 594942 . + . ID=gene542;Name=AB162_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02715;old_locus_tag=AB162_564 NZ_CP011787.1 Protein Homology CDS 594103 594942 . + 0 ID=cds501;Parent=gene542;Dbxref=Genbank:WP_053097410.1;Name=WP_053097410.1;Note=BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell;gbkey=CDS;product=UDP pyrophosphate phosphatase;protein_id=WP_053097410.1;transl_table=11 NZ_CP011787.1 RefSeq gene 595001 596203 . - . ID=gene543;Name=AB162_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02720;old_locus_tag=AB162_565 NZ_CP011787.1 Protein Homology CDS 595001 596203 . - 0 ID=cds502;Parent=gene543;Dbxref=Genbank:WP_053097299.1;Name=WP_053097299.1;gbkey=CDS;product=tRNA nucleotidyl transferase;protein_id=WP_053097299.1;transl_table=11 NZ_CP011787.1 RefSeq gene 596381 596629 . - . ID=gene544;Name=AB162_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02725;old_locus_tag=AB162_566 NZ_CP011787.1 Protein Homology CDS 596381 596629 . - 0 ID=cds503;Parent=gene544;Dbxref=Genbank:WP_053097301.1;Name=WP_053097301.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097301.1;transl_table=11 NZ_CP011787.1 RefSeq gene 596893 597531 . + . ID=gene545;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AB162_RS02730;old_locus_tag=AB162_567 NZ_CP011787.1 Protein Homology CDS 596893 597531 . + 0 ID=cds504;Parent=gene545;Dbxref=Genbank:WP_053097303.1;Name=WP_053097303.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=WP_053097303.1;transl_table=11 NZ_CP011787.1 RefSeq gene 597575 598303 . - . ID=gene546;Name=AB162_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02735;old_locus_tag=AB162_568 NZ_CP011787.1 Protein Homology CDS 597575 598303 . - 0 ID=cds505;Parent=gene546;Dbxref=Genbank:WP_053097305.1;Name=WP_053097305.1;gbkey=CDS;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=WP_053097305.1;transl_table=11 NZ_CP011787.1 RefSeq gene 598379 599785 . - . ID=gene547;Name=AB162_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02740;old_locus_tag=AB162_569 NZ_CP011787.1 Protein Homology CDS 598379 599785 . - 0 ID=cds506;Parent=gene547;Dbxref=Genbank:WP_053097308.1;Name=WP_053097308.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;product=DNA repair protein RadA;protein_id=WP_053097308.1;transl_table=11 NZ_CP011787.1 RefSeq gene 599991 600422 . - . ID=gene548;Name=AB162_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02745;old_locus_tag=AB162_570 NZ_CP011787.1 Protein Homology CDS 599991 600422 . - 0 ID=cds507;Parent=gene548;Dbxref=Genbank:WP_053097310.1;Name=WP_053097310.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097310.1;transl_table=11 NZ_CP011787.1 RefSeq gene 600615 602246 . - . ID=gene549;Name=AB162_RS02750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS02750;old_locus_tag=AB162_571;partial=true;pseudo=true;start_range=.,600615 NZ_CP011787.1 Protein Homology CDS 600615 602246 . - 0 ID=cds508;Parent=gene549;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;exception=unextendable partial coding region;gbkey=CDS;partial=true;product=DEAD/DEAH box helicase;pseudo=true;start_range=.,600615;transl_table=11 NZ_CP011787.1 RefSeq gene 602765 604888 . - . ID=gene550;Name=AB162_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02755;old_locus_tag=AB162_572 NZ_CP011787.1 Protein Homology CDS 602765 604888 . - 0 ID=cds509;Parent=gene550;Dbxref=Genbank:WP_053097312.1;Name=WP_053097312.1;gbkey=CDS;product=polynucleotide phosphorylase/polyadenylase;protein_id=WP_053097312.1;transl_table=11 NZ_CP011787.1 RefSeq gene 605057 605326 . - . ID=gene551;Name=AB162_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02760;old_locus_tag=AB162_573 NZ_CP011787.1 Protein Homology CDS 605057 605326 . - 0 ID=cds510;Parent=gene551;Dbxref=Genbank:WP_053097314.1;Name=WP_053097314.1;gbkey=CDS;product=30S ribosomal protein S15;protein_id=WP_053097314.1;transl_table=11 NZ_CP011787.1 RefSeq gene 605452 606402 . - . ID=gene552;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AB162_RS02765;old_locus_tag=AB162_574 NZ_CP011787.1 Protein Homology CDS 605452 606402 . - 0 ID=cds511;Parent=gene552;Dbxref=Genbank:WP_053097316.1;Name=WP_053097316.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=WP_053097316.1;transl_table=11 NZ_CP011787.1 RefSeq gene 606420 606812 . - . ID=gene553;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AB162_RS02770;old_locus_tag=AB162_575 NZ_CP011787.1 Protein Homology CDS 606420 606812 . - 0 ID=cds512;Parent=gene553;Dbxref=Genbank:WP_053097318.1;Name=WP_053097318.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=WP_053097318.1;transl_table=11 NZ_CP011787.1 RefSeq gene 606917 609550 . - . ID=gene554;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AB162_RS02775;old_locus_tag=AB162_576 NZ_CP011787.1 Protein Homology CDS 606917 609550 . - 0 ID=cds513;Parent=gene554;Dbxref=Genbank:WP_053097320.1;Name=WP_053097320.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=WP_053097320.1;transl_table=11 NZ_CP011787.1 RefSeq gene 609566 611050 . - . ID=gene555;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AB162_RS02780;old_locus_tag=AB162_577 NZ_CP011787.1 Protein Homology CDS 609566 611050 . - 0 ID=cds514;Parent=gene555;Dbxref=Genbank:WP_053097322.1;Name=WP_053097322.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;product=transcription elongation factor NusA;protein_id=WP_053097322.1;transl_table=11 NZ_CP011787.1 RefSeq gene 611310 611386 . - . ID=gene556;Name=AB162_RS02785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS02785;old_locus_tag=AB162_578 NZ_CP011787.1 tRNAscan-SE tRNA 611310 611386 . - . ID=rna41;Parent=gene556;anticodon=(pos:complement(611350..611352));gbkey=tRNA;product=tRNA-Met NZ_CP011787.1 tRNAscan-SE exon 611310 611386 . - . ID=id47;Parent=rna41;anticodon=(pos:complement(611350..611352));gbkey=tRNA;product=tRNA-Met NZ_CP011787.1 RefSeq gene 611456 611545 . - . ID=gene557;Name=AB162_RS02790;gbkey=Gene;gene_biotype=tRNA;locus_tag=AB162_RS02790;old_locus_tag=AB162_579 NZ_CP011787.1 tRNAscan-SE tRNA 611456 611545 . - . ID=rna42;Parent=gene557;anticodon=(pos:complement(611509..611511));gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 tRNAscan-SE exon 611456 611545 . - . ID=id48;Parent=rna42;anticodon=(pos:complement(611509..611511));gbkey=tRNA;product=tRNA-Leu NZ_CP011787.1 RefSeq gene 611590 611933 . - . ID=gene558;Name=AB162_RS02795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS02795;pseudo=true NZ_CP011787.1 Protein Homology CDS 611590 611933 . - 0 ID=cds515;Parent=gene558;exception=annotated by transcript or proteomic data;gbkey=CDS;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 612055 613386 . - . ID=gene559;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AB162_RS02800;old_locus_tag=AB162_582 NZ_CP011787.1 Protein Homology CDS 612055 613386 . - 0 ID=cds516;Parent=gene559;Dbxref=Genbank:WP_053097324.1;Name=WP_053097324.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=WP_053097324.1;transl_table=11 NZ_CP011787.1 RefSeq gene 613383 614219 . - . ID=gene560;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AB162_RS02805;old_locus_tag=AB162_583 NZ_CP011787.1 Protein Homology CDS 613383 614219 . - 0 ID=cds517;Parent=gene560;Dbxref=Genbank:WP_053097326.1;Name=WP_053097326.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=WP_053097326.1;transl_table=11 NZ_CP011787.1 RefSeq gene 614367 616184 . - . ID=gene561;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=pseudogene;gene_synonym=ftsH;locus_tag=AB162_RS02810;old_locus_tag=AB162_584;partial=true;pseudo=true;start_range=.,614367 NZ_CP011787.1 Protein Homology CDS 614367 616184 . - 0 ID=cds518;Parent=gene561;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;exception=unextendable partial coding region;gbkey=CDS;gene=hflB;partial=true;product=ATP-dependent metalloprotease;pseudo=true;start_range=.,614367;transl_table=11 NZ_CP011787.1 RefSeq gene 616245 616874 . - . ID=gene562;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=pseudogene;locus_tag=AB162_RS02815;old_locus_tag=AB162_585;pseudo=true NZ_CP011787.1 Protein Homology CDS 616245 616874 . - 0 ID=cds519;Parent=gene562;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;exception=annotated by transcript or proteomic data;gbkey=CDS;gene=rrmJ;product=23S rRNA methyltransferase;pseudo=true;transl_table=11 NZ_CP011787.1 RefSeq gene 617030 617512 . - . ID=gene563;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AB162_RS02820;old_locus_tag=AB162_586 NZ_CP011787.1 Protein Homology CDS 617030 617512 . - 0 ID=cds520;Parent=gene563;Dbxref=Genbank:WP_053097412.1;Name=WP_053097412.1;Note=necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus;gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=WP_053097412.1;transl_table=11 NZ_CP011787.1 RefSeq gene 617918 619120 . + . ID=gene564;Name=AB162_RS02825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AB162_RS02825;pseudo=true NZ_CP011787.1 Protein Homology CDS 617918 619120 . + 0 ID=cds521;Parent=gene564;Note=penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains;exception=annotated by transcript or proteomic data;gbkey=CDS;product=D-alanyl-D-alanine carboxypeptidase;pseudo=true;transl_except=(pos:618008..618010%2Caa:Other),(pos:618194..618196%2Caa:Other),(pos:618430..618432%2Caa:Other),(pos:618692..618694%2Caa:Other),(pos:618950..618952%2Caa:Other),(pos:618998..619000%2Caa:Other);transl_table=11 NZ_CP011787.1 RefSeq gene 619214 620284 . - . ID=gene565;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=AB162_RS02830;old_locus_tag=AB162_588 NZ_CP011787.1 Protein Homology CDS 619214 620284 . - 0 ID=cds522;Parent=gene565;Dbxref=Genbank:WP_053097413.1;Name=WP_053097413.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase CgtA;protein_id=WP_053097413.1;transl_table=11 NZ_CP011787.1 RefSeq gene 620331 620597 . - . ID=gene566;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AB162_RS02835;old_locus_tag=AB162_589 NZ_CP011787.1 Protein Homology CDS 620331 620597 . - 0 ID=cds523;Parent=gene566;Dbxref=Genbank:WP_053097328.1;Name=WP_053097328.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=WP_053097328.1;transl_table=11 NZ_CP011787.1 RefSeq gene 620625 620936 . - . ID=gene567;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AB162_RS02840;old_locus_tag=AB162_590 NZ_CP011787.1 Protein Homology CDS 620625 620936 . - 0 ID=cds524;Parent=gene567;Dbxref=Genbank:WP_053097330.1;Name=WP_053097330.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=WP_053097330.1;transl_table=11 NZ_CP011787.1 RefSeq gene 621086 622072 . + . ID=gene568;Name=AB162_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02845;old_locus_tag=AB162_591 NZ_CP011787.1 Protein Homology CDS 621086 622072 . + 0 ID=cds525;Parent=gene568;Dbxref=Genbank:WP_053097331.1;Name=WP_053097331.1;gbkey=CDS;product=octaprenyl diphosphate synthase;protein_id=WP_053097331.1;transl_table=11 NZ_CP011787.1 RefSeq gene 622191 623369 . + . ID=gene569;Name=AB162_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02850;old_locus_tag=AB162_592 NZ_CP011787.1 Protein Homology CDS 622191 623369 . + 0 ID=cds526;Parent=gene569;Dbxref=Genbank:WP_053097334.1;Name=WP_053097334.1;gbkey=CDS;product=phosphoglycerate kinase;protein_id=WP_053097334.1;transl_table=11 NZ_CP011787.1 RefSeq gene 623389 624468 . + . ID=gene570;Name=AB162_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02855;old_locus_tag=AB162_593 NZ_CP011787.1 Protein Homology CDS 623389 624468 . + 0 ID=cds527;Parent=gene570;Dbxref=Genbank:WP_053097336.1;Name=WP_053097336.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=WP_053097336.1;transl_table=11 NZ_CP011787.1 RefSeq gene 624580 625239 . + . ID=gene571;Name=AB162_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02860;old_locus_tag=AB162_594 NZ_CP011787.1 Protein Homology CDS 624580 625239 . + 0 ID=cds528;Parent=gene571;Dbxref=Genbank:WP_053097338.1;Name=WP_053097338.1;gbkey=CDS;product=ribose 5-phosphate isomerase;protein_id=WP_053097338.1;transl_table=11 NZ_CP011787.1 RefSeq gene 625246 625881 . - . ID=gene572;Name=AB162_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02865;old_locus_tag=AB162_595 NZ_CP011787.1 Protein Homology CDS 625246 625881 . - 0 ID=cds529;Parent=gene572;Dbxref=Genbank:WP_053097340.1;Name=WP_053097340.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097340.1;transl_table=11 NZ_CP011787.1 RefSeq gene 626321 627493 . + . ID=gene573;Name=AB162_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02870;old_locus_tag=AB162_596 NZ_CP011787.1 Protein Homology CDS 626321 627493 . + 0 ID=cds530;Parent=gene573;Dbxref=Genbank:WP_053097343.1;Name=WP_053097343.1;Note=Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone;gbkey=CDS;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_053097343.1;transl_table=11 NZ_CP011787.1 RefSeq gene 627517 628734 . + . ID=gene574;Name=AB162_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02875;old_locus_tag=AB162_597 NZ_CP011787.1 Protein Homology CDS 627517 628734 . + 0 ID=cds531;Parent=gene574;Dbxref=Genbank:WP_053097345.1;Name=WP_053097345.1;gbkey=CDS;product=oxidoreductase;protein_id=WP_053097345.1;transl_table=11 NZ_CP011787.1 RefSeq gene 629377 630960 . - . ID=gene575;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AB162_RS02880;old_locus_tag=AB162_598 NZ_CP011787.1 Protein Homology CDS 629377 630960 . - 0 ID=cds532;Parent=gene575;Dbxref=Genbank:WP_053097347.1;Name=WP_053097347.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase;protein_id=WP_053097347.1;transl_table=11 NZ_CP011787.1 RefSeq gene 630988 632445 . - . ID=gene576;Name=AB162_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02885;old_locus_tag=AB162_599 NZ_CP011787.1 Protein Homology CDS 630988 632445 . - 0 ID=cds533;Parent=gene576;Dbxref=Genbank:WP_053097348.1;Name=WP_053097348.1;gbkey=CDS;product=inosine-5-monophosphate dehydrogenase;protein_id=WP_053097348.1;transl_table=11 ##sequence-region NZ_CP011788.1 1 3465 ##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=186490 NZ_CP011788.1 RefSeq region 1 3465 . + . ID=id49;Dbxref=taxon:186490;Is_circular=true;Name=unnamed;collection-date=2008-01-01;country=USA: University of California%2C Berkeley;gbkey=Src;genome=plasmid;mol_type=genomic DNA;nat-host=Draeculacephala minerva;plasmid-name=unnamed;strain=B-GSS NZ_CP011788.1 RefSeq gene 13 840 . + . ID=gene577;Name=AB162_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02890;old_locus_tag=AB162_p001 NZ_CP011788.1 Protein Homology CDS 13 840 . + 0 ID=cds534;Parent=gene577;Dbxref=Genbank:WP_053097423.1;Name=WP_053097423.1;gbkey=CDS;product=replication protein;protein_id=WP_053097423.1;transl_table=11 NZ_CP011788.1 RefSeq gene 858 1334 . - . ID=gene578;Name=AB162_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02895;old_locus_tag=AB162_p002 NZ_CP011788.1 Protein Homology CDS 858 1334 . - 0 ID=cds535;Parent=gene578;Dbxref=Genbank:WP_053097416.1;Name=WP_053097416.1;gbkey=CDS;product=heat-shock protein;protein_id=WP_053097416.1;transl_table=11 NZ_CP011788.1 RefSeq gene 1448 2353 . - . ID=gene579;Name=AB162_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02900;old_locus_tag=AB162_p005 NZ_CP011788.1 Protein Homology CDS 1448 2353 . - 0 ID=cds536;Parent=gene579;Dbxref=Genbank:WP_053097418.1;Name=WP_053097418.1;gbkey=CDS;product=protease;protein_id=WP_053097418.1;transl_table=11 NZ_CP011788.1 RefSeq gene 2593 2949 . - . ID=gene580;Name=AB162_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AB162_RS02905;old_locus_tag=AB162_p003 NZ_CP011788.1 Protein Homology CDS 2593 2949 . - 0 ID=cds537;Parent=gene580;Dbxref=Genbank:WP_053097420.1;Name=WP_053097420.1;gbkey=CDS;product=hypothetical protein;protein_id=WP_053097420.1;transl_table=11 ###