locus_tag	old_locus_tag	gene	Name	start	end	strand	product	note	type	ID	NCBI
CleRt_RS00005	CleRT_00010	dnaA	dnaA	26	1375	+	chromosomal replication initiator protein DnaA	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.	gene	gene0	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00005
CleRt_RS00010	CleRT_00020		CleRt_RS00010	1406	2515	+	DNA polymerase III subunit beta		gene	gene1	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00010
CleRt_RS00015	CleRT_00030		CleRt_RS00015	2520	3668	+	DNA replication/repair protein RecF		gene	gene2	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00015
CleRt_RS00020	CleRT_00040		CleRt_RS00020	3843	4289	-	hypothetical protein		gene	gene3	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00020
CleRt_RS00025	CleRT_00050		CleRt_RS00025	4653	7073	+	DNA topoisomerase (ATP-hydrolyzing) subunit B		gene	gene4	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00025
CleRt_RS00030	CleRT_00060		CleRt_RS00030	7210	8054	+	Ku protein	frameshifted%3B internal stop	pseudogene	gene5	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00030
CleRt_RS00035	CleRT_00070		CleRt_RS00035	8075	10442	+	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start	pseudogene	gene6	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00035
CleRt_RS00040	CleRT_00090		CleRt_RS00040	10991	11566	-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD		gene	gene8	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00040
CleRt_RS00045	CleRt_RS00045		CleRt_RS00045	11621	11833	-	hypothetical protein		gene	gene9	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00045
CleRt_RS00055	CleRT_00120		CleRt_RS00055	13410	14387	+	signal recognition particle-docking protein FtsY		gene	gene11	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00055
CleRt_RS00060	CleRT_00130		CleRt_RS00060	14398	14989	+	cell division ATP-binding protein FtsE	frameshifted%3B internal stop	pseudogene	gene12	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00060
CleRt_RS00065	CleRT_00140		CleRt_RS00065	14965	15724	+	ABC transporter permease	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene13	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00065
CleRt_RS00070	CleRT_00150		CleRt_RS00070	16650	17513	+	RNA polymerase sigma factor RpoH		gene	gene14	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00070
CleRt_RS00075	CleRT_00160		CleRt_RS00075	17560	18372	+	hypothetical protein		gene	gene15	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00075
CleRt_RS00080	CleRT_00170		CleRt_RS00080	18515	19423	+	glycine--tRNA ligase subunit alpha		gene	gene16	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00080
CleRt_RS00085	CleRT_00180		CleRt_RS00085	19423	21492	+	glycine--tRNA ligase subunit beta		gene	gene17	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00085
CleRt_RS00090	CleRT_00200		CleRt_RS00090	22503	22937	-	universal stress protein		gene	gene20	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00090
CleRt_RS00095	CleRT_00210		CleRt_RS00095	23380	23514	+	50S ribosomal protein L34		gene	gene21	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00095
CleRt_RS00100	CleRT_00220		CleRt_RS00100	23514	23855	+	ribonuclease P protein component		gene	gene22	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00100
CleRt_RS00105	CleRT_00230		CleRt_RS00105	23819	24085	+	membrane protein insertion efficiency factor YidD		gene	gene23	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00105
CleRt_RS00110	CleRT_00240		CleRt_RS00110	24085	25791	+	membrane protein insertase YidC		gene	gene24	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00110
CleRt_RS00115	CleRT_00250		CleRt_RS00115	26240	27601	+	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE		gene	gene25	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00115
CleRt_RS00120	CleRT_00260		CleRt_RS00120	27657	29537	+	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG		gene	gene26	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00120
CleRt_RS00125	CleRT_00280		CleRt_RS00125	30089	30862	+	ParA family protein		gene	gene28	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00125
CleRt_RS00130	CleRT_00290		CleRt_RS00130	30859	31731	+	chromosome partitioning protein ParB		gene	gene29	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00130
CleRt_RS00150	CleRt_RS00150		CleRt_RS00150	35048	35236	-	hypothetical protein		gene	gene31	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00150
CleRt_RS00155	CleRT_00320		CleRt_RS00155	35937	36341	+	ATP synthase F0 subunit I		gene	gene32	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00155
CleRt_RS00160	CleRT_00330		CleRt_RS00160	36353	37147	+	F0F1 ATP synthase subunit A	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0	gene	gene33	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00160
CleRt_RS00165	CleRT_00340		CleRt_RS00165	37168	37473	+	F0F1 ATP synthase subunit C	produces ATP from ADP in the presence of a proton gradient across the membrane%3B subunit C is part of the membrane proton channel F0	gene	gene34	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00165
CleRt_RS00170	CleRT_00350		CleRt_RS00170	37533	38003	+	F0F1 ATP synthase subunit B		gene	gene35	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00170
CleRt_RS00175	CleRT_00360		CleRt_RS00175	38006	38563	+	F0F1 ATP synthase subunit delta		gene	gene36	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00175
CleRt_RS00180	CleRT_00370		CleRt_RS00180	38570	40117	+	F0F1 ATP synthase subunit alpha		gene	gene37	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00180
CleRt_RS00185	CleRT_00380		CleRt_RS00185	40146	41015	+	F0F1 ATP synthase subunit gamma	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit	gene	gene38	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00185
CleRt_RS00190	CleRT_00390		CleRt_RS00190	41041	42420	+	F0F1 ATP synthase subunit beta		gene	gene39	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00190
CleRt_RS00195	CleRT_00400		CleRt_RS00195	42537	42962	+	F0F1 ATP synthase subunit epsilon		gene	gene40	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00195
CleRt_RS00200	CleRT_00410		CleRt_RS00200	42987	44384	+	UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase		gene	gene41	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00200
CleRt_RS00205	CleRt_RS00205		CleRt_RS00205	45757	45957	+	hypothetical protein		gene	gene42	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00205
CleRt_RS00210	CleRT_00420		CleRt_RS00210	46321	46614	+	hypothetical protein		gene	gene43	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00210
CleRt_RS00215	CleRt_RS00215		CleRt_RS00215	46681	46878	+	hypothetical protein		gene	gene44	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00215
CleRt_RS00220	CleRt_RS00220		CleRt_RS00220	47962	48183	+	hypothetical protein		gene	gene45	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00220
CleRt_RS00225	CleRT_00440		CleRt_RS00225	48252	48692	-	hypothetical protein		gene	gene46	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00225
CleRt_RS00230	CleRT_00450		CleRt_RS00230	48800	49083	+	hypothetical protein	frameshifted	pseudogene	gene47	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00230
CleRt_RS00235	CleRT_00460		CleRt_RS00235	49080	49447	+	pyridine nucleotide transhydrogenase	frameshifted	pseudogene	gene48	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00235
CleRt_RS00245	CleRT_00480		CleRt_RS00245	51405	52138	-	16S rRNA (uracil(1498)-N(3))-methyltransferase	frameshifted%3B internal stop	pseudogene	gene51	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00245
CleRt_RS00250	CleRT_00490		CleRt_RS00250	52222	54264	+	M3 family peptidase		gene	gene52	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00250
CleRt_RS00260	CleRT_00510		CleRt_RS00260	55354	55871	+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA	frameshifted%3B internal stop	pseudogene	gene54	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00260
CleRt_RS00265	CleRT_00520		CleRt_RS00265	55906	56232	+	hypothetical protein		gene	gene55	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00265
CleRt_RS00270	CleRT_00530		CleRt_RS00270	56435	57712	+	beta-ketoacyl-ACP synthase	frameshifted%3B internal stop	pseudogene	gene56	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00270
CleRt_RS00275	CleRT_00570		CleRt_RS00275	60008	61240	+	hydroxymethylglutaryl-CoA reductase	frameshifted%3B internal stop	pseudogene	gene61	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00275
CleRt_RS00280	CleRT_00590		CleRt_RS00280	61897	63631	+	FAD-binding protein	frameshifted%3B internal stop	pseudogene	gene62	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00280
CleRt_RS00285	CleRT_00620		CleRt_RS00285	65065	66000	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene65	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00285
CleRt_RS00295	CleRT_00640		CleRt_RS00295	67099	67767	+	ribose-5-phosphate isomerase RpiA		gene	gene68	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00295
CleRt_RS00300	CleRT_00650		CleRt_RS00300	67964	68254	+	carbon storage regulator		gene	gene69	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00300
CleRt_RS00305	CleRT_00660		CleRt_RS00305	68555	69070	+	hypothetical protein		gene	gene70	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00305
CleRt_RS00310	CleRt_RS00310		CleRt_RS00310	69323	69604	-	hypothetical protein		gene	gene71	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00310
CleRt_RS00315	CleRt_RS00315		CleRt_RS00315	70970	71167	-	hypothetical protein		gene	gene72	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00315
CleRt_RS00320	CleRT_00670		CleRt_RS00320	71552	72053	+	ribosomal subunit interface protein	frameshifted%3B internal stop	pseudogene	gene73	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00320
CleRt_RS00325	CleRT_00680		CleRt_RS00325	72060	72797	-	deoxyribose-phosphate aldolase		gene	gene74	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00325
CleRt_RS00330	CleRT_00690		CleRt_RS00330	72794	73615	-	purine-nucleoside phosphorylase		gene	gene75	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00330
CleRt_RS00335	CleRT_00700		CleRt_RS00335	73619	74242	-	TIGR00153 family protein		gene	gene76	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00335
CleRt_RS00340	CleRt_RS00340		CleRt_RS00340	74377	74574	-	hypothetical protein		gene	gene77	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00340
CleRt_RS00345	CleRt_RS00345		CleRt_RS00345	74677	75087	-	hypothetical protein		gene	gene78	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00345
CleRt_RS00355	CleRt_RS00355		CleRt_RS00355	76333	76530	+	hypothetical protein		gene	gene80	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00355
CleRt_RS00360	CleRT_00730		CleRt_RS00360	76535	76951	+	hypothetical protein		gene	gene81	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00360
CleRt_RS00365	CleRT_00740		CleRt_RS00365	77285	78124	-	shikimate dehydrogenase		gene	gene82	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00365
CleRt_RS00370	CleRT_00750		CleRt_RS00370	78149	79548	-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene83	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00370
CleRt_RS00375	CleRT_00770		CleRt_RS00375	80403	81629	+	MFS transporter		gene	gene85	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00375
CleRt_RS00380	CleRT_00780		CleRt_RS00380	82886	83983	-	3-dehydroquinate synthase		gene	gene86	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00380
CleRt_RS00385	CleRT_00790	aroK	aroK	83988	84479	-	shikimate kinase	type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis	gene	gene87	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00385
CleRt_RS00395	CleRt_RS00395		CleRt_RS00395	86632	86889	-	hypothetical protein		gene	gene89	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00395
CleRt_RS00400	CleRT_00840		CleRt_RS00400	87362	89668	+	peptidase	frameshifted%3B internal stop	pseudogene	gene90	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00400
CleRt_RS00405	CleRT_00850		CleRt_RS00405	89682	90191	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene91	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00405
CleRt_RS00410	CleRT_00860		CleRt_RS00410	90303	91617	-	aspartate aminotransferase family protein	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway%3B frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene92	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00410
CleRt_RS00415	CleRT_00870		CleRt_RS00415	91649	91819	+	rubredoxin		gene	gene93	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00415
CleRt_RS00425	CleRT_00890		CleRt_RS00425	92439	92849	+	iron-sulfur cluster insertion protein ErpA		gene	gene96	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00425
CleRt_RS00430	CleRT_00900		CleRt_RS00430	92815	93621	-	SAM-dependent methyltransferase		gene	gene97	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00430
CleRt_RS00435	CleRT_00910		CleRt_RS00435	93632	94597	-	glutathione synthase		gene	gene98	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00435
CleRt_RS00440	CleRT_00920		CleRt_RS00440	94608	95891	-	glutamate--cysteine ligase		gene	gene99	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00440
CleRt_RS00445	CleRT_00930		CleRt_RS00445	96086	96898	+	co-chaperone DjlA		gene	gene100	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00445
CleRt_RS00450	CleRT_00940		CleRt_RS00450	96929	97621	+	ribulose-phosphate 3-epimerase		gene	gene101	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00450
CleRt_RS00455	CleRT_00950		CleRt_RS00455	97648	98295	-	demethoxyubiquinone hydroxylase family protein		gene	gene102	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00455
CleRt_RS00460	CleRT_00960		CleRt_RS00460	98285	98968	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene103	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00460
CleRt_RS00465	CleRT_00970		CleRt_RS00465	99138	101381	+	DNA topoisomerase IV subunit A		gene	gene104	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00465
CleRt_RS00470	CleRT_00980		CleRt_RS00470	101411	101958	+	hypothetical protein	frameshifted	pseudogene	gene105	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00470
CleRt_RS00475	CleRT_00990		CleRt_RS00475	101945	102931	-	EF-P beta-lysylation protein EpmB		gene	gene106	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00475
CleRt_RS00480	CleRT_01000		CleRt_RS00480	103195	105401	+	peptide ABC transporter substrate-binding protein	frameshifted%3B internal stop	pseudogene	gene107	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00480
CleRt_RS00490	CleRT_01040		CleRt_RS00490	109021	110097	+	3-hydroxyisobutyryl-CoA hydrolase	frameshifted%3B internal stop	pseudogene	gene110	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00490
CleRt_RS00500	CleRT_01090		CleRt_RS00500	113186	114038	-	glucose-1-phosphate thymidylyltransferase	frameshifted%3B internal stop	pseudogene	gene115	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00500
CleRt_RS00505	CleRT_01100		CleRt_RS00505	114245	115470	+	homoserine dehydrogenase	frameshifted	pseudogene	gene116	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00505
CleRt_RS00510	CleRt_RS00510		CleRt_RS00510	116744	116932	+	hypothetical protein		gene	gene117	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00510
CleRt_RS00520	CleRt_RS00520		CleRt_RS00520	118575	118952	-	universal stress protein		gene	gene119	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00520
CleRt_RS00525	CleRt_RS00525		CleRt_RS00525	119190	119402	-	universal stress protein		gene	gene120	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00525
CleRt_RS00530	CleRT_t001		CleRt_RS00530	120149	120222	-	tRNA-Met		tRNA	gene121	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00530
CleRt_RS00535	CleRT_01150		CleRt_RS00535	120283	121383	-	redox-regulated ATPase YchF		gene	gene122	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00535
CleRt_RS00540	CleRT_01160		CleRt_RS00540	121427	121990	-	aminoacyl-tRNA hydrolase		gene	gene123	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00540
CleRt_RS00545	CleRT_01170		CleRt_RS00545	122057	122719	-	50S ribosomal protein L25		gene	gene124	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00545
CleRt_RS00550	CleRt_RS00550		CleRt_RS00550	123036	123221	+	hypothetical protein		gene	gene125	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00550
CleRt_RS00555	CleRt_RS00555		CleRt_RS00555	123221	123475	+	hypothetical protein		gene	gene126	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00555
CleRt_RS00560	CleRt_RS00560		CleRt_RS00560	123603	123854	+	hypothetical protein		gene	gene127	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00560
CleRt_RS00565	CleRT_01190		CleRt_RS00565	124137	125096	-	ribose-phosphate pyrophosphokinase	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP	gene	gene128	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00565
CleRt_RS00570	CleRT_t002		CleRt_RS00570	125124	125198	-	tRNA-Gln		tRNA	gene129	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00570
CleRt_RS00575	CleRT_01200		CleRt_RS00575	125877	126143	-	hypothetical protein		gene	gene130	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00575
CleRt_RS00580	CleRT_01210		CleRt_RS00580	126795	127421	-	outer membrane lipoprotein LolB		gene	gene132	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00580
CleRt_RS00585	CleRT_01220		CleRt_RS00585	127622	128785	+	SAM-dependent methyltransferase		gene	gene133	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00585
CleRt_RS00590	CleRT_01230		CleRt_RS00590	128786	129898	-	multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase		gene	gene134	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00590
CleRt_RS00595	CleRT_01240		CleRt_RS00595	129999	130838	+	phosphatidylserine decarboxylase		gene	gene135	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00595
CleRt_RS00600	CleRT_01250		CleRt_RS00600	131088	131617	+	superoxide dismutase	frameshifted%3B internal stop	pseudogene	gene136	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00600
CleRt_RS00605	CleRT_01260		CleRt_RS00605	131669	132634	-	elongation factor P--(R)-beta-lysine ligase	poxA%3B regulates pyruvate oxidase poxB	gene	gene137	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00605
CleRt_RS00610	CleRT_01270		CleRt_RS00610	132710	133276	-	elongation factor P		gene	gene138	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00610
CleRt_RS00615	CleRT_01280		CleRt_RS00615	133320	135296	+	primosomal protein N'		gene	gene139	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00615
CleRt_RS00620	CleRt_RS00620		CleRt_RS00620	135576	135782	-	hypothetical protein		gene	gene140	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00620
CleRt_RS00625	CleRt_RS00625		CleRt_RS00625	136533	136829	+	hypothetical protein		gene	gene141	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00625
CleRt_RS00630	CleRt_RS00630		CleRt_RS00630	136869	137054	+	hypothetical protein		gene	gene142	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00630
CleRt_RS00635	CleRT_01320		CleRt_RS00635	137979	139085	-	DUF3410 domain-containing protein		gene	gene143	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00635
CleRt_RS00640	CleRT_01330		CleRt_RS00640	139209	140769	+	type I secretion protein TolC	frameshifted%3B internal stop	pseudogene	gene144	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00640
CleRt_RS00645	CleRT_01340		CleRt_RS00645	140747	141814	+	ABC transporter substrate-binding protein	frameshifted%3B internal stop	pseudogene	gene145	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00645
CleRt_RS00650	CleRT_01350		CleRt_RS00650	141807	142277	+	hypothetical protein	frameshifted	pseudogene	gene146	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00650
CleRt_RS00670	CleRT_01380		CleRt_RS00670	144323	144766	-	acyl-CoA thioesterase		gene	gene149	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00670
CleRt_RS00675	CleRT_01390		CleRt_RS00675	144771	146414	-	APC family permease		gene	gene150	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00675
CleRt_RS00680	CleRt_RS00680		CleRt_RS00680	146899	147138	-	hypothetical protein		gene	gene151	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00680
CleRt_RS00685	CleRt_RS00685		CleRt_RS00685	147431	147682	-	hypothetical protein		gene	gene152	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00685
CleRt_RS00690	CleRT_01400		CleRt_RS00690	148028	150718	+	DNA polymerase I		gene	gene153	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00690
CleRt_RS00695	CleRT_01410		CleRt_RS00695	150705	151821	+	thiamine biosynthesis protein ThiF	frameshifted%3B internal stop	pseudogene	gene154	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00695
CleRt_RS00700	CleRT_01420		CleRt_RS00700	152202	152465	+	hypothetical protein		gene	gene155	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00700
CleRt_RS00705	CleRt_RS00705		CleRt_RS00705	152946	153185	+	hypothetical protein		gene	gene156	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00705
CleRt_RS00710	CleRt_RS00710		CleRt_RS00710	153360	153560	+	hypothetical protein		gene	gene157	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00710
CleRt_RS00715	CleRt_RS00715		CleRt_RS00715	153656	153922	+	hypothetical protein		gene	gene158	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00715
CleRt_RS00720	CleRT_01440		CleRt_RS00720	153937	155154	+	ATPase	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene159	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00720
CleRt_RS00725	CleRT_01450		CleRt_RS00725	155228	156257	+	gluconolactonase	frameshifted%3B internal stop	pseudogene	gene160	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00725
CleRt_RS00730	CleRT_01460		CleRt_RS00730	156453	158282	-	glutamine--fructose-6-phosphate transaminase (isomerizing)		gene	gene161	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00730
CleRt_RS00735	CleRT_01480		CleRt_RS00735	158872	160884	+	transketolase		gene	gene162	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00735
CleRt_RS00740	CleRT_01490		CleRt_RS00740	160886	161896	+	type I glyceraldehyde-3-phosphate dehydrogenase		gene	gene163	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00740
CleRt_RS00745	CleRT_01500		CleRt_RS00745	162013	163188	+	phosphoglycerate kinase		gene	gene164	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00745
CleRt_RS00750	CleRT_01510		CleRt_RS00750	163175	164638	+	pyruvate kinase		gene	gene165	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00750
CleRt_RS00755	CleRT_01520		CleRt_RS00755	164656	165738	+	fructose-bisphosphate aldolase class II		gene	gene166	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00755
CleRt_RS00760	CleRt_RS00760		CleRt_RS00760	165954	166154	+	hypothetical protein		gene	gene167	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00760
CleRt_RS00765	CleRt_RS00765		CleRt_RS00765	166323	166547	+	hypothetical protein		gene	gene168	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00765
CleRt_RS00770	CleRt_RS00770		CleRt_RS00770	166739	167023	+	hypothetical protein		gene	gene170	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00770
CleRt_RS00775	CleRt_RS00775		CleRt_RS00775	167010	167255	+	hypothetical protein		gene	gene171	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00775
CleRt_RS00790	CleRT_01560		CleRt_RS00790	169821	170234	+	type II secretion system protein GspG	frameshifted%3B internal stop	pseudogene	gene175	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00790
CleRt_RS00795	CleRt_RS00795		CleRt_RS00795	171089	171412	+	prepilin-type cleavage/methylation domain-containing protein		gene	gene177	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00795
CleRt_RS00800	CleRt_RS00800		CleRt_RS00800	171477	171752	+	hypothetical protein		gene	gene178	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00800
CleRt_RS00805	CleRt_RS00805		CleRt_RS00805	172113	172343	+	hypothetical protein		gene	gene179	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00805
CleRt_RS00810	CleRt_RS00810		CleRt_RS00810	173107	173655	+	hypothetical protein		gene	gene180	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00810
CleRt_RS00815	CleRt_RS00815		CleRt_RS00815	173663	173857	+	hypothetical protein		gene	gene181	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00815
CleRt_RS00820	CleRt_RS00820		CleRt_RS00820	173854	174135	+	hypothetical protein		gene	gene182	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00820
CleRt_RS00825	CleRT_01630		CleRt_RS00825	175206	175814	+	YihA family ribosome biogenesis GTP-binding protein		gene	gene184	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00825
CleRt_RS00830	CleRT_01640		CleRt_RS00830	176153	177898	+	sulfonate ABC transporter permease		gene	gene185	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00830
CleRt_RS00835	CleRT_01650		CleRt_RS00835	177895	179217	+	nitrate ABC transporter ATP-binding protein		gene	gene186	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00835
CleRt_RS00840	CleRT_01660		CleRt_RS00840	179218	179853	+	alpha/beta hydrolase		gene	gene187	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00840
CleRt_RS00845	CleRT_01680		CleRt_RS00845	181163	181432	+	ferrous iron transport protein A		gene	gene188	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00845
CleRt_RS00850	CleRT_01690		CleRt_RS00850	181425	183710	+	Fe(2+) transporter permease subunit FeoB		gene	gene189	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00850
CleRt_RS00855	CleRT_01700		CleRt_RS00855	183728	183955	+	hypothetical protein		gene	gene190	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00855
CleRt_RS00860	CleRT_01710		CleRt_RS00860	184120	184617	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene191	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00860
CleRt_RS00865	CleRt_RS00865		CleRt_RS00865	184845	185033	-	hypothetical protein		gene	gene192	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00865
CleRt_RS00870	CleRT_01720		CleRt_RS00870	185757	186041	-	hypothetical protein		gene	gene193	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00870
CleRt_RS00875	CleRt_RS00875		CleRt_RS00875	186727	186942	+	hypothetical protein		gene	gene194	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00875
CleRt_RS00880	CleRT_01740		CleRt_RS00880	188506	188937	+	50S ribosomal protein L13		gene	gene196	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00880
CleRt_RS00885	CleRT_01750		CleRt_RS00885	188953	189372	+	30S ribosomal protein S9		gene	gene197	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00885
CleRt_RS00890	CleRT_01760	sspA	sspA	189400	190026	+	stringent starvation protein A	transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation	gene	gene198	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00890
CleRt_RS00895	CleRT_01770		CleRt_RS00895	190040	190432	+	ClpXP protease specificity-enhancing factor		gene	gene199	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00895
CleRt_RS00900	CleRT_01780		CleRt_RS00900	190462	191136	+	site-2 protease family protein		gene	gene200	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00900
CleRt_RS00905	CleRT_01790		CleRt_RS00905	191151	191726	-	BON domain-containing protein		gene	gene201	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00905
CleRt_RS00910	CleRT_01800		CleRt_RS00910	191766	192359	-	phosphoheptose isomerase		gene	gene202	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00910
CleRt_RS00915	CleRT_01820		CleRt_RS00915	192803	193926	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene204	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00915
CleRt_RS00920	CleRT_01830		CleRt_RS00920	193972	194826	+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase		gene	gene205	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00920
CleRt_RS00925	CleRT_01840		CleRt_RS00925	194792	195130	-	integration host factor subunit beta		gene	gene206	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00925
CleRt_RS00930	CleRT_01860		CleRt_RS00930	196004	196917	-	phosphoribosylformylglycinamidine cyclo-ligase	frameshifted%3B internal stop	pseudogene	gene208	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00930
CleRt_RS00935	CleRT_01870		CleRt_RS00935	197074	198179	+	hypothetical protein	frameshifted	pseudogene	gene209	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00935
CleRt_RS00940	CleRT_01880		CleRt_RS00940	198182	198904	+	DnaA regulatory inactivator Hda		gene	gene210	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00940
CleRt_RS00945	CleRt_RS00945		CleRt_RS00945	198889	199224	-	hypothetical protein		gene	gene211	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00945
CleRt_RS00950	CleRt_RS00950		CleRt_RS00950	199648	199860	+	hypothetical protein		gene	gene212	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00950
CleRt_RS00955	CleRt_RS00955		CleRt_RS00955	200507	200767	-	hypothetical protein		gene	gene213	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00955
CleRt_RS00960	CleRT_01900		CleRt_RS00960	200953	202143	-	3-phosphoglycerate dehydrogenase	frameshifted%3B internal stop	pseudogene	gene214	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00960
CleRt_RS00965	CleRT_01920		CleRt_RS00965	203596	204429	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene215	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00965
CleRt_RS00970	CleRT_01930		CleRt_RS00970	204467	205316	+	coproporphyrinogen III oxidase	frameshifted%3B internal stop	pseudogene	gene216	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00970
CleRt_RS00975	CleRT_01940		CleRt_RS00975	205443	206024	+	nicotinamide riboside transporter PnuC		gene	gene217	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00975
CleRt_RS00980	CleRt_RS00980		CleRt_RS00980	206237	206512	-	hypothetical protein		gene	gene218	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00980
CleRt_RS00985	CleRT_01960		CleRt_RS00985	207108	208124	+	ornithine cyclodeaminase		gene	gene219	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00985
CleRt_RS00990	CleRT_01970		CleRt_RS00990	208350	209693	-	acetyl-CoA carboxylase biotin carboxylase subunit		gene	gene220	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00990
CleRt_RS00995	CleRT_01980		CleRt_RS00995	209706	210176	-	acetyl-CoA carboxylase biotin carboxyl carrier protein		gene	gene221	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS00995
CleRt_RS01005	CleRt_RS01005		CleRt_RS01005	211936	212265	-	hypothetical protein		gene	gene224	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01005
CleRt_RS01010	CleRt_RS01010		CleRt_RS01010	212295	212606	-	hypothetical protein		gene	gene225	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01010
CleRt_RS01015	CleRt_RS01015		CleRt_RS01015	212617	212805	-	hypothetical protein		gene	gene226	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01015
CleRt_RS01020	CleRT_02010		CleRt_RS01020	213947	216625	-	aconitate hydratase AcnA		gene	gene227	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01020
CleRt_RS01025	CleRT_02020		CleRt_RS01025	216904	217194	+	co-chaperone GroES		gene	gene228	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01025
CleRt_RS01030	CleRT_02030		CleRt_RS01030	217226	218881	+	chaperonin GroEL		gene	gene229	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01030
CleRt_RS01035	CleRT_02040		CleRt_RS01035	218998	220083	+	glycine cleavage system protein T		gene	gene230	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01035
CleRt_RS01040	CleRT_02050		CleRt_RS01040	220095	220484	+	glycine cleavage system protein H		gene	gene231	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01040
CleRt_RS01045	CleRT_02060		CleRt_RS01045	220484	221866	+	aminomethyl-transferring glycine dehydrogenase		gene	gene232	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01045
CleRt_RS01050	CleRT_02070		CleRt_RS01050	221872	223386	+	glycine dehydrogenase (aminomethyl-transferring)	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B forms a heterodimer with subunit 1 to form the P protein	gene	gene233	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01050
CleRt_RS01055	CleRT_02080		CleRt_RS01055	223402	223722	+	hypothetical protein		gene	gene234	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01055
CleRt_RS01060	CleRT_02090		CleRt_RS01060	223753	224478	-	4-hydroxy-tetrahydrodipicolinate reductase		gene	gene235	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01060
CleRt_RS01065	CleRT_02100		CleRt_RS01065	224475	225059	-	superoxide dismutase	SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals	gene	gene236	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01065
CleRt_RS01070	CleRT_02110		CleRt_RS01070	225386	225991	+	peroxiredoxin		gene	gene237	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01070
CleRt_RS01075	CleRT_02120		CleRt_RS01075	226215	226907	-	ribonuclease T		gene	gene238	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01075
CleRt_RS01080	CleRT_02130		CleRt_RS01080	226931	227977	-	dihydroorotase		gene	gene239	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01080
CleRt_RS01090	CleRT_02150		CleRt_RS01090	229841	230272	-	DUF1841 domain-containing protein		gene	gene241	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01090
CleRt_RS01095	CleRT_02160		CleRt_RS01095	230272	230910	-	endonuclease III		gene	gene242	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01095
CleRt_RS01100	CleRT_02170		CleRt_RS01100	230907	231539	-	4Fe-4S ferredoxin		gene	gene243	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01100
CleRt_RS01105	CleRT_02180		CleRt_RS01105	231536	233173	-	methionine--tRNA ligase		gene	gene244	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01105
CleRt_RS01110	CleRT_02190		CleRt_RS01110	233310	234197	+	ATP-binding protein		gene	gene245	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01110
CleRt_RS01115	CleRT_02200		CleRt_RS01115	234197	234763	+	dCTP deaminase		gene	gene246	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01115
CleRt_RS01120	CleRT_02210	pyrG	pyrG	235011	236678	+	CTP synthase	CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer	gene	gene247	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01120
CleRt_RS01125	CleRT_02220		CleRt_RS01125	236826	237683	+	3-deoxy-8-phosphooctulonate synthase		gene	gene248	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01125
CleRt_RS01130	CleRT_02230		CleRt_RS01130	237778	239052	+	phosphopyruvate hydratase		gene	gene249	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01130
CleRt_RS01135	CleRT_02240		CleRt_RS01135	239071	239343	+	cell division protein FtsB		gene	gene250	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01135
CleRt_RS01140	CleRT_02250		CleRt_RS01140	239518	240294	+	5'/3'-nucleotidase SurE		gene	gene251	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01140
CleRt_RS01145	CleRT_02260		CleRt_RS01145	240353	241024	+	peptidase		gene	gene252	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01145
CleRt_RS01155	CleRT_02270		CleRt_RS01155	241062	242135	+	RNA polymerase sigma factor RpoS	frameshifted%3B internal stop	pseudogene	gene253	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01155
CleRt_RS01160	CleRT_02280		CleRt_RS01160	242171	242724	-	hypothetical protein	frameshifted	pseudogene	gene254	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01160
CleRt_RS01165	CleRT_02290		CleRt_RS01165	242902	243126	+	zinc-finger domain-containing protein		gene	gene255	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01165
CleRt_RS01170	CleRT_02300		CleRt_RS01170	243130	244170	+	lipopolysaccharide heptosyltransferase II		gene	gene256	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01170
CleRt_RS01175	CleRt_RS01175		CleRt_RS01175	245292	245492	+	hypothetical protein		gene	gene258	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01175
CleRt_RS01180	CleRt_RS01180		CleRt_RS01180	245473	245757	+	hypothetical protein		gene	gene259	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01180
CleRt_RS01185	CleRt_RS01185		CleRt_RS01185	245813	246115	+	hypothetical protein		gene	gene260	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01185
CleRt_RS01190	CleRT_02330		CleRt_RS01190	246169	247374	-	ligase		gene	gene261	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01190
CleRt_RS01195	CleRT_02340		CleRt_RS01195	247450	248544	+	glycosyltransferase family 1 protein		gene	gene262	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01195
CleRt_RS01200	CleRT_02350		CleRt_RS01200	248559	249338	+	alpha-L-glycero-D-manno-heptose beta-1%2C4-glucosyltransferase	frameshifted%3B internal stop	pseudogene	gene263	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01200
CleRt_RS01205	CleRT_02360		CleRt_RS01205	249392	249667	-	hypothetical protein		gene	gene264	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01205
CleRt_RS01210	CleRT_02380		CleRt_RS01210	250785	252221	+	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose	gene	gene266	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01210
CleRt_RS01215	CleRT_02390		CleRt_RS01215	252218	253201	+	ADP-glyceromanno-heptose 6-epimerase		gene	gene267	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01215
CleRt_RS01220	CleRt_RS01220		CleRt_RS01220	253448	253696	-	hypothetical protein		gene	gene268	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01220
CleRt_RS01225	CleRT_02410		CleRt_RS01225	253813	254958	-	phosphoesterase	frameshifted%3B internal stop	pseudogene	gene269	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01225
CleRt_RS01230	CleRt_RS01230		CleRt_RS01230	255224	255421	-	hypothetical protein		gene	gene270	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01230
CleRt_RS01235	CleRT_02430		CleRt_RS01235	255418	255896	-	phosphoesterase	frameshifted	pseudogene	gene271	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01235
CleRt_RS01240	CleRT_02440		CleRt_RS01240	256119	256562	+	hypothetical protein		gene	gene272	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01240
CleRt_RS01250	CleRt_RS01250		CleRt_RS01250	258791	259057	-	hypothetical protein		gene	gene276	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01250
CleRt_RS01255	CleRt_RS01255		CleRt_RS01255	259615	259983	-	hypothetical protein		gene	gene277	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01255
CleRt_RS01260	CleRT_02470		CleRt_RS01260	261024	262144	-	Dot/Icm secretion system ATPase DotB	frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene278	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01260
CleRt_RS01265	CleRT_02480		CleRt_RS01265	262255	263084	-	type IV secretion system protein DotC	frameshifted%3B internal stop	pseudogene	gene279	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01265
CleRt_RS01275	CleRT_02500		CleRt_RS01275	263668	264004	-	type IV secretion protein IcmS	frameshifted%3B internal stop	pseudogene	gene281	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01275
CleRt_RS01280	CleRT_02520		CleRt_RS01280	264571	265294	+	Dot/Icm secretion system protein IcmQ	frameshifted%3B internal stop	pseudogene	gene282	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01280
CleRt_RS01285	CleRT_02530		CleRt_RS01285	265294	266470	+	phosphoesterase	frameshifted%3B internal stop	pseudogene	gene283	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01285
CleRt_RS01290	CleRt_RS01290		CleRt_RS01290	266446	268468	+	phosphoesterase	frameshifted%3B internal stop	pseudogene	gene284	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01290
CleRt_RS01300	CleRT_02550		CleRt_RS01300	268622	269133	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene285	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01300
CleRt_RS01305	CleRT_02560		CleRt_RS01305	269142	269757	+	type IV secretion protein IcmL	frameshifted%3B internal stop	pseudogene	gene286	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01305
CleRt_RS01310	CleRT_02570		CleRt_RS01310	269771	270443	+	type IV secretion protein IcmL	frameshifted%3B internal stop	pseudogene	gene287	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01310
CleRt_RS01335	CleRT_02600		CleRt_RS01335	273409	274124	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene290	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01335
CleRt_RS01340	CleRt_RS01340		CleRt_RS01340	275080	275319	+	hypothetical protein		gene	gene292	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01340
CleRt_RS01345	CleRT_02620		CleRt_RS01345	275470	276150	+	hypothetical protein		gene	gene293	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01345
CleRt_RS01350	CleRT_02630		CleRt_RS01350	277070	277435	+	hypothetical protein		gene	gene294	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01350
CleRt_RS01355	CleRT_02640		CleRt_RS01355	278178	278590	+	type IV secretion protein IcmD	frameshifted%3B internal stop	pseudogene	gene295	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01355
CleRt_RS01360	CleRT_02650		CleRt_RS01360	278626	279163	+	HNH endonuclease	frameshifted	pseudogene	gene296	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01360
CleRt_RS01365	CleRT_02660		CleRt_RS01365	279169	281856	+	type IV secretion protein IcmB	frameshifted%3B internal stop	pseudogene	gene297	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01365
CleRt_RS01370	CleRt_RS01370		CleRt_RS01370	284452	284667	-	hypothetical protein		gene	gene299	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01370
CleRt_RS01375	CleRt_RS01375		CleRt_RS01375	284657	285094	-	hypothetical protein		gene	gene300	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01375
CleRt_RS01380	CleRT_02690		CleRt_RS01380	285713	287837	-	mechanosensitive ion channel protein MscS	frameshifted%3B internal stop	pseudogene	gene301	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01380
CleRt_RS01385	CleRt_RS01385		CleRt_RS01385	288308	288499	+	hypothetical protein		gene	gene302	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01385
CleRt_RS01390	CleRT_02710		CleRt_RS01390	288863	289074	-	hypothetical protein	frameshifted	pseudogene	gene304	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01390
CleRt_RS01395	CleRT_t003		CleRt_RS01395	290033	290106	+	tRNA-Met		tRNA	gene305	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01395
CleRt_RS01410	CleRT_02740		CleRt_RS01410	291334	293451	-	RNA polymerase sigma factor RpoD		gene	gene307	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01410
CleRt_RS01415	CleRT_02750		CleRt_RS01415	293599	295302	-	DNA primase		gene	gene308	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01415
CleRt_RS01420	CleRT_02770		CleRt_RS01420	295915	296139	-	30S ribosomal protein S21		gene	gene310	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01420
CleRt_RS01425	CleRT_02780		CleRt_RS01425	296371	296693	+	hypothetical protein	frameshifted	pseudogene	gene311	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01425
CleRt_RS01430	CleRT_02790		CleRt_RS01430	296791	297987	+	Na+/H+ antiporter NhaA		gene	gene312	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01430
CleRt_RS01435	CleRT_02800		CleRt_RS01435	297944	299036	-	cell division protein ZapE	frameshifted%3B internal stop	pseudogene	gene313	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01435
CleRt_RS01440	CleRT_02810		CleRt_RS01440	299033	299629	-	NAD(P)H:quinone oxidoreductase		gene	gene314	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01440
CleRt_RS01445	CleRT_02820		CleRt_RS01445	299824	300675	+	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene315	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01445
CleRt_RS01450	CleRT_02830		CleRt_RS01450	300713	301639	+	peptidase M23B		gene	gene316	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01450
CleRt_RS01455	CleRt_RS01455		CleRt_RS01455	302298	302678	-	hypothetical protein		gene	gene317	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01455
CleRt_RS01460	CleRt_RS01460		CleRt_RS01460	302901	303104	+	hypothetical protein		gene	gene318	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01460
CleRt_RS01465	CleRt_RS01465		CleRt_RS01465	303108	303428	-	hypothetical protein		gene	gene319	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01465
CleRt_RS01470	CleRt_RS01470		CleRt_RS01470	303425	303874	-	hypothetical protein		gene	gene320	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01470
CleRt_RS01475	CleRT_02850		CleRt_RS01475	304201	304623	-	protein TolR		gene	gene321	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01475
CleRt_RS01480	CleRT_02860		CleRt_RS01480	304601	305305	-	protein TolQ		gene	gene322	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01480
CleRt_RS01485	CleRT_02870		CleRt_RS01485	305371	306617	-	MFS transporter	frameshifted%3B internal stop	pseudogene	gene323	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01485
CleRt_RS01490	CleRT_02880		CleRt_RS01490	306764	307798	-	Holliday junction branch migration DNA helicase RuvB		gene	gene324	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01490
CleRt_RS01495	CleRT_02890		CleRt_RS01495	307802	308401	-	Holliday junction branch migration protein RuvA		gene	gene325	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01495
CleRt_RS01500	CleRT_02900		CleRt_RS01500	308512	309015	-	crossover junction endodeoxyribonuclease RuvC		gene	gene326	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01500
CleRt_RS01505	CleRT_02910		CleRt_RS01505	309020	309757	-	YebC/PmpR family DNA-binding transcriptional regulator		gene	gene327	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01505
CleRt_RS01510	CleRT_02920		CleRt_RS01510	309765	311537	-	aspartate--tRNA ligase		gene	gene328	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01510
CleRt_RS01515	CleRT_02930		CleRt_RS01515	311675	312472	-	hypothetical protein		gene	gene329	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01515
CleRt_RS01520	CleRT_02950		CleRt_RS01520	313181	313468	-	FmdB family transcriptional regulator	internal stop	pseudogene	gene331	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01520
CleRt_RS01525	CleRt_RS01525		CleRt_RS01525	313660	313881	-	hypothetical protein		gene	gene332	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01525
CleRt_RS01530	CleRt_RS01530		CleRt_RS01530	316521	316727	-	hypothetical protein		gene	gene333	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01530
CleRt_RS01535	CleRt_RS01535		CleRt_RS01535	317051	317233	-	hypothetical protein		gene	gene334	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01535
CleRt_RS01540	CleRT_02980		CleRt_RS01540	318265	319500	-	ribonucleotide-diphosphate reductase subunit beta		gene	gene335	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01540
CleRt_RS01545	CleRT_02990		CleRt_RS01545	319629	322451	-	ribonucleoside-diphosphate reductase subunit alpha		gene	gene336	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01545
CleRt_RS01550	CleRT_03000		CleRt_RS01550	322830	323270	+	RNA pyrophosphohydrolase	frameshifted	pseudogene	gene337	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01550
CleRt_RS01555	CleRT_03010		CleRt_RS01555	323270	325543	+	phosphoenolpyruvate-protein phosphotransferase PtsP		gene	gene338	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01555
CleRt_RS01560	CleRT_03020		CleRt_RS01560	325616	326401	+	prolipoprotein diacylglyceryl transferase		gene	gene339	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01560
CleRt_RS01565	CleRT_03030		CleRt_RS01565	326414	326804	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene340	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01565
CleRt_RS01570	CleRT_03040		CleRt_RS01570	326804	327598	+	thymidylate synthase		gene	gene341	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01570
CleRt_RS01575	CleRt_RS01575		CleRt_RS01575	327576	327806	-	hypothetical protein		gene	gene342	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01575
CleRt_RS01580	CleRt_RS01580		CleRt_RS01580	328790	328987	+	hypothetical protein		gene	gene343	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01580
CleRt_RS01585	CleRT_03050		CleRt_RS01585	329085	330482	-	S41 family peptidase		gene	gene344	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01585
CleRt_RS01590	CleRt_RS01590		CleRt_RS01590	330507	331055	-	peptidase M23	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start	pseudogene	gene345	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01590
CleRt_RS01595	CleRT_03070		CleRt_RS01595	331438	333033	-	2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase		gene	gene346	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01595
CleRt_RS01600	CleRT_03080		CleRt_RS01600	333176	335113	+	S9 family peptidase		gene	gene347	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01600
CleRt_RS01605	CleRT_03090		CleRt_RS01605	335119	335973	+	DUF2520 domain-containing protein		gene	gene348	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01605
CleRt_RS01610	CleRT_03100		CleRt_RS01610	336073	336504	+	rhodanese-like domain-containing protein		gene	gene349	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01610
CleRt_RS01615	CleRT_03110		CleRt_RS01615	336506	336781	+	glutaredoxin 3		gene	gene350	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01615
CleRt_RS01620	CleRT_03120		CleRt_RS01620	336781	337257	+	protein-export chaperone SecB		gene	gene351	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01620
CleRt_RS01625	CleRT_03130		CleRt_RS01625	337260	338261	+	glycerol-3-phosphate dehydrogenase		gene	gene352	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01625
CleRt_RS01630	CleRT_03140		CleRt_RS01630	338295	338809	-	tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL	member of the SPOUT superfamily of RNA methyltransferases%3B frameshifted%3B internal stop	pseudogene	gene353	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01630
CleRt_RS01635	CleRT_03150		CleRt_RS01635	339262	339570	-	hypothetical protein		gene	gene354	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01635
CleRt_RS01640	CleRt_RS01640		CleRt_RS01640	340220	340549	-	hypothetical protein		gene	gene355	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01640
CleRt_RS01645	CleRT_03170		CleRt_RS01645	340706	341493	+	NAD(P)-dependent oxidoreductase	frameshifted%3B internal stop	pseudogene	gene356	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01645
CleRt_RS01650	CleRT_03180		CleRt_RS01650	341493	342200	+	hypothetical protein		gene	gene357	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01650
CleRt_RS01655	CleRT_03190		CleRt_RS01655	342224	342997	-	zinc transporter		gene	gene358	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01655
CleRt_RS01660	CleRT_03200		CleRt_RS01660	343070	344020	+	acetyl-CoA carboxylase carboxyltransferase subunit alpha		gene	gene359	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01660
CleRt_RS01665	CleRT_03210		CleRt_RS01665	343996	345353	+	tRNA lysidine(34) synthetase TilS	frameshifted	pseudogene	gene360	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01665
CleRt_RS01680	CleRT_03240		CleRt_RS01680	347133	348944	+	elongation factor 4		gene	gene364	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01680
CleRt_RS01685	CleRT_03250		CleRt_RS01685	348934	349712	+	signal peptidase I	frameshifted	pseudogene	gene365	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01685
CleRt_RS01690	CleRT_03260		CleRt_RS01690	349745	350410	+	ribonuclease III		gene	gene366	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01690
CleRt_RS01695	CleRT_03270		CleRt_RS01695	350403	351296	+	GTPase Era		gene	gene367	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01695
CleRt_RS01700	CleRT_03280		CleRt_RS01700	351293	351988	+	DNA repair protein RecO		gene	gene368	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01700
CleRt_RS01705	CleRT_03290		CleRt_RS01705	352018	352740	+	pyridoxine 5'-phosphate synthase		gene	gene369	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01705
CleRt_RS01710	CleRT_03300		CleRt_RS01710	352821	353546	-	UDP-2%2C3-diacylglucosamine diphosphatase		gene	gene370	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01710
CleRt_RS01715	CleRT_03310		CleRt_RS01715	353763	355169	+	glutamate--tRNA ligase		gene	gene371	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01715
CleRt_RS01720	CleRT_03320		CleRt_RS01720	355144	356535	+	cysteine--tRNA ligase		gene	gene372	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01720
CleRt_RS01725	CleRt_RS01725		CleRt_RS01725	356961	357275	+	hypothetical protein		gene	gene373	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01725
CleRt_RS01730	CleRT_03350		CleRt_RS01730	357891	359180	-	MFS transporter		gene	gene374	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01730
CleRt_RS01745	CleRT_03370		CleRt_RS01745	360492	361165	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene376	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01745
CleRt_RS01755	CleRt_RS01755		CleRt_RS01755	363416	363670	-	hypothetical protein		gene	gene379	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01755
CleRt_RS01765	CleRT_03430		CleRt_RS01765	364640	366042	-	deoxyribodipyrimidine photolyase	frameshifted%3B internal stop	pseudogene	gene380	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01765
CleRt_RS01770	CleRT_03450		CleRt_RS01770	366851	367141	+	hypothetical protein		gene	gene381	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01770
CleRt_RS01775	CleRT_03460		CleRt_RS01775	367381	367913	-	alkyl hydroperoxide reductase	frameshifted%3B internal stop	pseudogene	gene382	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01775
CleRt_RS01780	CleRT_03470		CleRt_RS01780	367924	368433	-	alkyl hydroperoxide reductase	frameshifted%3B internal stop	pseudogene	gene383	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01780
CleRt_RS01785	CleRT_03480	gatB	gatB	368600	370033	-	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA	gene	gene384	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01785
CleRt_RS01790	CleRT_03490		CleRt_RS01790	370041	371495	-	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA		gene	gene385	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01790
CleRt_RS01795	CleRT_03500		CleRt_RS01795	371507	371806	-	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC		gene	gene386	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01795
CleRt_RS01800	CleRT_03510		CleRt_RS01800	371976	373022	+	rod shape-determining protein		gene	gene387	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01800
CleRt_RS01805	CleRT_03520		CleRt_RS01805	373064	373960	+	rod shape-determining protein MreC		gene	gene388	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01805
CleRt_RS01810	CleRT_03530		CleRt_RS01810	373950	374438	+	rod shape-determining protein MreD		gene	gene389	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01810
CleRt_RS01825	CleRT_03550		CleRt_RS01825	378044	379477	+	metalloprotease TldD		gene	gene391	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01825
CleRt_RS01830	CleRT_03560		CleRt_RS01830	379805	380089	+	HU family DNA-binding protein	histone-like DNA-binding protein	gene	gene392	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01830
CleRt_RS01835	CleRT_t004		CleRt_RS01835	380259	380331	+	tRNA-Val		tRNA	gene393	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01835
CleRt_RS01840	CleRT_t005		CleRt_RS01840	380440	380516	+	tRNA-Asp		tRNA	gene394	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01840
CleRt_RS01845	CleRt_RS01845		CleRt_RS01845	380674	380886	+	hypothetical protein		gene	gene395	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01845
CleRt_RS01850	CleRt_RS01850		CleRt_RS01850	381036	381419	+	hypothetical protein		gene	gene396	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01850
CleRt_RS01855	CleRT_03580		CleRt_RS01855	382768	383535	+	triose-phosphate isomerase		gene	gene397	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01855
CleRt_RS01860	CleRT_03590		CleRt_RS01860	383517	383798	+	preprotein translocase subunit SecG		gene	gene398	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01860
CleRt_RS01865	CleRT_t006		CleRt_RS01865	383841	383925	+	tRNA-Leu		tRNA	gene399	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01865
CleRt_RS01870	CleRT_03600		CleRt_RS01870	384056	384412	+	NADH-quinone oxidoreductase subunit A		gene	gene400	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01870
CleRt_RS01875	CleRT_03610		CleRt_RS01875	384413	384913	+	NADH dehydrogenase	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen	gene	gene401	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01875
CleRt_RS01880	CleRT_03620		CleRt_RS01880	384906	385577	+	NADH-quinone oxidoreductase subunit C		gene	gene402	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01880
CleRt_RS01885	CleRT_03630		CleRt_RS01885	385578	386831	+	NADH-quinone oxidoreductase subunit NuoD	Catalyzes the transfer of electrons from NADH to quinone	gene	gene403	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01885
CleRt_RS01890	CleRT_03640		CleRt_RS01890	386831	387358	+	NAD(P)H-dependent oxidoreductase subunit E		gene	gene404	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01890
CleRt_RS01895	CleRT_03650		CleRt_RS01895	387348	388619	+	NADH oxidoreductase (quinone) subunit F	part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase	gene	gene405	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01895
CleRt_RS01900	CleRT_03660		CleRt_RS01900	388643	391054	+	NADH-quinone oxidoreductase subunit G		gene	gene406	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01900
CleRt_RS01905	CleRT_03670		CleRt_RS01905	391054	392076	+	NADH-quinone oxidoreductase subunit NuoH		gene	gene407	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01905
CleRt_RS01910	CleRT_03680		CleRt_RS01910	392080	392571	+	NADH-quinone oxidoreductase subunit NuoI		gene	gene408	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01910
CleRt_RS01915	CleRT_03690		CleRt_RS01915	392591	393196	+	NADH-quinone oxidoreductase subunit J		gene	gene409	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01915
CleRt_RS01920	CleRT_03700		CleRt_RS01920	393193	393498	+	NADH-quinone oxidoreductase subunit NuoK		gene	gene410	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01920
CleRt_RS01925	CleRT_03710		CleRt_RS01925	393506	395461	+	NADH-quinone oxidoreductase subunit L		gene	gene411	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01925
CleRt_RS01930	CleRT_03720		CleRt_RS01930	395466	396986	+	NADH-quinone oxidoreductase subunit M	Catalyzes the transfer of electrons from NADH to quinone	gene	gene412	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01930
CleRt_RS01935	CleRT_03730		CleRt_RS01935	396999	398447	+	NADH-quinone oxidoreductase subunit NuoN		gene	gene413	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01935
CleRt_RS01940	CleRT_t007		CleRt_RS01940	399303	399379	+	tRNA-Met		tRNA	gene414	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01940
CleRt_RS01945	CleRT_03740		CleRt_RS01945	399474	399933	+	ribosome maturation factor RimP	frameshifted%3B internal stop	pseudogene	gene415	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01945
CleRt_RS01950	CleRT_03750	nusA	nusA	399944	401437	+	transcription termination/antitermination protein NusA	modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination	gene	gene416	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01950
CleRt_RS01955	CleRT_03760		CleRt_RS01955	401456	403867	+	translation initiation factor IF-2		gene	gene417	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01955
CleRt_RS01960	CleRT_03770		CleRt_RS01960	403870	404223	+	30S ribosome-binding factor RbfA		gene	gene418	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01960
CleRt_RS01965	CleRT_03780		CleRt_RS01965	404207	405139	+	tRNA pseudouridine(55) synthase TruB		gene	gene419	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01965
CleRt_RS01975	CleRT_03800		CleRt_RS01975	405955	406382	+	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene421	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01975
CleRt_RS01980	CleRT_03810		CleRt_RS01980	406476	407416	+	delta-aminolevulinic acid dehydratase	frameshifted%3B internal stop	pseudogene	gene422	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01980
CleRt_RS01985	CleRT_03820		CleRt_RS01985	407484	408839	+	DNA repair protein RadA		gene	gene423	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01985
CleRt_RS01990	CleRt_RS01990		CleRt_RS01990	409250	409522	+	hypothetical protein		gene	gene424	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01990
CleRt_RS01995	CleRT_03830		CleRt_RS01995	409500	409781	+	hypothetical protein		gene	gene425	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS01995
CleRt_RS02000	CleRT_03840		CleRt_RS02000	409955	410557	+	hypothetical protein		gene	gene426	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02000
CleRt_RS02005	CleRT_03850	glyA	glyA	410757	412025	+	serine hydroxymethyltransferase	catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate	gene	gene427	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02005
CleRt_RS02010	CleRT_03860		CleRt_RS02010	412029	412484	+	transcriptional regulator NrdR	frameshifted%3B internal stop	pseudogene	gene428	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02010
CleRt_RS02015	CleRT_03870		CleRt_RS02015	412490	412906	+	transcription antitermination factor NusB		gene	gene429	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02015
CleRt_RS02020	CleRT_03890		CleRt_RS02020	413293	413942	-	transcriptional regulator	frameshifted%3B internal stop	pseudogene	gene430	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02020
CleRt_RS02025	CleRT_03900		CleRt_RS02025	414153	415103	+	thiamine-phosphate kinase		gene	gene431	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02025
CleRt_RS02030	CleRT_03910		CleRt_RS02030	415090	415614	+	phosphatidylglycerophosphatase A		gene	gene432	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02030
CleRt_RS02035	CleRt_RS02035		CleRt_RS02035	415664	415891	+	hypothetical protein		gene	gene433	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02035
CleRt_RS02040	CleRt_RS02040		CleRt_RS02040	415892	416113	+	hypothetical protein		gene	gene434	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02040
CleRt_RS02045	CleRT_03950		CleRt_RS02045	417708	418994	-	citrate (Si)-synthase		gene	gene435	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02045
CleRt_RS02050	CleRT_03960		CleRt_RS02050	419250	419636	+	succinate dehydrogenase%2C cytochrome b556 subunit		gene	gene436	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02050
CleRt_RS02055	CleRT_03970		CleRt_RS02055	419630	419971	+	succinate dehydrogenase%2C hydrophobic membrane anchor protein		gene	gene437	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02055
CleRt_RS02060	CleRT_03980		CleRt_RS02060	419983	421746	+	succinate dehydrogenase flavoprotein subunit		gene	gene438	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02060
CleRt_RS02065	CleRT_03990	sdhB	sdhB	421750	422478	+	succinate dehydrogenase iron-sulfur subunit	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase	gene	gene439	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02065
CleRt_RS02070	CleRT_04000		CleRt_RS02070	422546	425359	+	2-oxoglutarate dehydrogenase E1 component		gene	gene440	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02070
CleRt_RS02075	CleRT_04010		CleRt_RS02075	425361	426578	+	dihydrolipoyllysine-residue succinyltransferase		gene	gene441	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02075
CleRt_RS02080	CleRT_04020		CleRt_RS02080	426648	427817	+	ADP-forming succinate--CoA ligase subunit beta		gene	gene442	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02080
CleRt_RS02085	CleRT_04030		CleRt_RS02085	427817	428689	+	succinate--CoA ligase subunit alpha		gene	gene443	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02085
CleRt_RS02090	CleRT_04040		CleRt_RS02090	428807	429148	+	hypothetical protein		gene	gene444	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02090
CleRt_RS02100	CleRt_RS02100		CleRt_RS02100	430695	430991	-	hypothetical protein		gene	gene446	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02100
CleRt_RS02105	CleRT_04060		CleRt_RS02105	431582	432367	-	type I methionyl aminopeptidase		gene	gene447	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02105
CleRt_RS02110	CleRT_04070		CleRt_RS02110	432617	433573	+	30S ribosomal protein S2		gene	gene448	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02110
CleRt_RS02115	CleRT_04080		CleRt_RS02115	433584	434474	+	elongation factor Ts		gene	gene449	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02115
CleRt_RS02120	CleRT_04090		CleRt_RS02120	434474	435196	+	UMP kinase		gene	gene450	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02120
CleRt_RS02125	CleRT_04100		CleRt_RS02125	435288	435845	+	ribosome recycling factor		gene	gene451	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02125
CleRt_RS02130	CleRT_04110		CleRt_RS02130	435882	436652	+	isoprenyl transferase		gene	gene452	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02130
CleRt_RS02135	CleRT_04120		CleRt_RS02135	436645	437454	+	phosphatidate cytidylyltransferase		gene	gene453	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02135
CleRt_RS02140	CleRT_04130		CleRt_RS02140	437501	439042	-	dihydrofolate reductase		gene	gene454	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02140
CleRt_RS02145	CleRT_04140		CleRt_RS02145	439032	439943	-	mevalonate kinase		gene	gene455	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02145
CleRt_RS02150	CleRT_04150		CleRt_RS02150	439966	440985	-	mevalonate kinase		gene	gene456	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02150
CleRt_RS02155	CleRT_04160		CleRt_RS02155	440996	442066	-	hydroxymethylglutaryl-CoA reductase		gene	gene457	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02155
CleRt_RS02160	CleRt_RS02160		CleRt_RS02160	442593	442820	+	hypothetical protein		gene	gene458	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02160
CleRt_RS02165	CleRT_04170		CleRt_RS02165	442839	443138	-	hypothetical protein		gene	gene459	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02165
CleRt_RS02175	CleRT_04190		CleRt_RS02175	444131	444679	-	hypothetical protein	internal stop	pseudogene	gene461	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02175
CleRt_RS02180	CleRt_RS02180		CleRt_RS02180	444967	445191	-	hypothetical protein		gene	gene462	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02180
CleRt_RS02190	CleRT_04210		CleRt_RS02190	446761	449166	+	outer membrane protein assembly factor BamA		gene	gene464	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02190
CleRt_RS02195	CleRT_04220		CleRt_RS02195	449245	449742	+	membrane protein		gene	gene465	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02195
CleRt_RS02200	CleRT_04230		CleRt_RS02200	449757	450809	+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase		gene	gene466	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02200
CleRt_RS02205	CleRT_04240		CleRt_RS02205	450781	451227	+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ		gene	gene467	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02205
CleRt_RS02210	CleRT_04250		CleRt_RS02210	451220	452032	+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase		gene	gene468	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02210
CleRt_RS02220	CleRT_04280		CleRt_RS02220	454419	455555	-	lipid-A-disaccharide synthase		gene	gene473	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02220
CleRt_RS02225	CleRT_04290		CleRt_RS02225	455557	456531	-	gfo/Idh/MocA family oxidoreductase		gene	gene474	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02225
CleRt_RS02230	CleRT_04300		CleRt_RS02230	456741	457231	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene475	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02230
CleRt_RS02235	CleRT_04310		CleRt_RS02235	457238	457384	-	entericidin%2C EcnA/B family		gene	gene476	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02235
CleRt_RS02240	CleRT_04320		CleRt_RS02240	457541	457987	+	tRNA adenosine(34) deaminase TadA		gene	gene477	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02240
CleRt_RS02245	CleRT_04330		CleRt_RS02245	459399	459926	+	inorganic diphosphatase		gene	gene478	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02245
CleRt_RS02250	CleRT_04340		CleRt_RS02250	459941	463084	+	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA		gene	gene479	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02250
CleRt_RS02255	CleRT_04350		CleRt_RS02255	463222	463913	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene480	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02255
CleRt_RS02260	CleRT_04360		CleRt_RS02260	464061	467903	+	phosphoribosylformylglycinamidine synthase	frameshifted%3B internal stop	pseudogene	gene481	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02260
CleRt_RS02265	CleRt_RS02265		CleRt_RS02265	468087	468392	+	hypothetical protein		gene	gene482	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02265
CleRt_RS02270	CleRT_04380		CleRt_RS02270	470381	470782	+	hypothetical protein		gene	gene483	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02270
CleRt_RS02275	CleRt_RS02275		CleRt_RS02275	471254	471616	+	hypothetical protein		gene	gene484	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02275
CleRt_RS02280	CleRt_RS02280		CleRt_RS02280	471971	472291	+	ATP-binding protein		gene	gene485	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02280
CleRt_RS02285	CleRT_04400		CleRt_RS02285	473048	473233	-	hypothetical protein		gene	gene486	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02285
CleRt_RS02290	CleRT_04410		CleRt_RS02290	473349	474485	-	2-oxo acid dehydrogenase subunit E2		gene	gene487	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02290
CleRt_RS02295	CleRT_04420		CleRt_RS02295	474485	475465	-	alpha-ketoacid dehydrogenase subunit beta		gene	gene488	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02295
CleRt_RS02300	CleRT_04430		CleRt_RS02300	475462	476544	-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha		gene	gene489	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02300
CleRt_RS02305	CleRT_04440		CleRt_RS02305	476541	477641	-	Glu/Leu/Phe/Val dehydrogenase		gene	gene490	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02305
CleRt_RS02310	CleRT_04450		CleRt_RS02310	477703	478464	+	glycerophosphoryl diester phosphodiesterase	frameshifted%3B internal stop	pseudogene	gene491	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02310
CleRt_RS02315	CleRT_04460		CleRt_RS02315	478464	479528	+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD		gene	gene492	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02315
CleRt_RS02320	CleRT_04470		CleRt_RS02320	479887	480495	+	riboflavin synthase		gene	gene493	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02320
CleRt_RS02325	CleRT_04480		CleRt_RS02325	480479	481714	+	bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II		gene	gene494	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02325
CleRt_RS02330	CleRT_04490		CleRt_RS02330	481698	482147	+	6%2C7-dimethyl-8-ribityllumazine synthase		gene	gene495	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02330
CleRt_RS02335	CleRT_04500		CleRt_RS02335	482140	483273	+	AI-2E family transporter		gene	gene496	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02335
CleRt_RS02340	CleRT_04510		CleRt_RS02340	483299	483637	-	nucleoid-associated protein%2C YbaB/EbfC family		gene	gene497	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02340
CleRt_RS02345	CleRT_04520		CleRt_RS02345	483653	484261	-	recombination protein RecR		gene	gene498	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02345
CleRt_RS02350	CleRT_04530		CleRt_RS02350	484273	484681	-	hypothetical protein	frameshifted	pseudogene	gene499	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02350
CleRt_RS02355	CleRT_04540		CleRt_RS02355	484729	486267	-	DNA polymerase III subunit gamma/tau		gene	gene500	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02355
CleRt_RS02365	CleRT_t008		CleRt_RS02365	486495	486585	-	tRNA-Ser		tRNA	gene502	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02365
CleRt_RS02370	CleRT_04550		CleRt_RS02370	486827	487955	-	succinyl-diaminopimelate desuccinylase	frameshifted	pseudogene	gene503	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02370
CleRt_RS02375	CleRT_04560		CleRt_RS02375	487957	488775	-	2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase		gene	gene504	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02375
CleRt_RS02380	CleRT_t009		CleRt_RS02380	488953	489026	+	tRNA-Pro		tRNA	gene505	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02380
CleRt_RS02385	CleRT_t010		CleRt_RS02385	489117	489190	+	tRNA-Arg		tRNA	gene506	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02385
CleRt_RS02390	CleRT_t011		CleRt_RS02390	489274	489351	+	tRNA-His		tRNA	gene507	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02390
CleRt_RS02395	CleRT_04570		CleRt_RS02395	489398	490828	+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase		gene	gene508	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02395
CleRt_RS02400	CleRT_04580		CleRt_RS02400	490882	492807	-	hypothetical protein		gene	gene509	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02400
CleRt_RS02405	CleRT_04590		CleRt_RS02405	492830	494608	-	asparagine synthase (glutamine-hydrolyzing)		gene	gene510	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02405
CleRt_RS02410	CleRT_04600		CleRt_RS02410	494760	495122	-	hypothetical protein		gene	gene511	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02410
CleRt_RS02415	CleRT_04610		CleRt_RS02415	495196	495696	-	hypothetical protein		gene	gene512	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02415
CleRt_RS02420	CleRt_RS02420		CleRt_RS02420	495954	496172	+	hypothetical protein		gene	gene513	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02420
CleRt_RS02425	CleRT_04630		CleRt_RS02425	497296	499329	-	hypothetical protein		gene	gene514	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02425
CleRt_RS02430	CleRT_04640		CleRt_RS02430	499354	500121	-	hypothetical protein		gene	gene515	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02430
CleRt_RS02435	CleRT_04650		CleRt_RS02435	500140	500931	-	hypothetical protein		gene	gene516	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02435
CleRt_RS02440	CleRT_04670		CleRt_RS02440	502356	502634	+	hypothetical protein		gene	gene517	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02440
CleRt_RS02450	CleRt_RS02450		CleRt_RS02450	503868	504173	+	hypothetical protein		gene	gene519	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02450
CleRt_RS02455	CleRt_RS02455		CleRt_RS02455	504377	505165	+	hypothetical protein		gene	gene521	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02455
CleRt_RS02460	CleRt_RS02460		CleRt_RS02460	505514	505798	+	hypothetical protein		gene	gene522	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02460
CleRt_RS02465	CleRt_RS02465		CleRt_RS02465	507650	507859	+	hypothetical protein		gene	gene524	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02465
CleRt_RS02470	CleRt_RS02470		CleRt_RS02470	508660	508857	-	hypothetical protein		gene	gene525	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02470
CleRt_RS02475	CleRt_RS02475		CleRt_RS02475	512613	512822	+	hypothetical protein		gene	gene526	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02475
CleRt_RS02480	CleRt_RS02480		CleRt_RS02480	512963	513196	+	hypothetical protein		gene	gene527	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02480
CleRt_RS02485	CleRt_RS02485		CleRt_RS02485	513178	513438	+	nitronate monooxygenase		gene	gene528	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02485
CleRt_RS02490	CleRT_04770		CleRt_RS02490	514664	514999	+	hypothetical protein		gene	gene530	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02490
CleRt_RS02495	CleRT_t012		CleRt_RS02495	515618	515690	+	tRNA-Lys		tRNA	gene531	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02495
CleRt_RS02500	CleRt_RS02500		CleRt_RS02500	515764	516066	-	site-specific integrase		gene	gene532	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02500
CleRt_RS02505	CleRt_RS02505		CleRt_RS02505	516053	516343	-	hypothetical protein		gene	gene533	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02505
CleRt_RS02510	CleRt_RS02510		CleRt_RS02510	516369	516641	-	hypothetical protein		gene	gene534	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02510
CleRt_RS02515	CleRT_04800		CleRt_RS02515	518224	518499	-	hypothetical protein		gene	gene535	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02515
CleRt_RS02520	CleRT_04810		CleRt_RS02520	518471	518875	-	DUF3775 domain-containing protein		gene	gene536	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02520
CleRt_RS02525	CleRT_04820		CleRt_RS02525	519146	520336	+	type III PLP-dependent enzyme		gene	gene537	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02525
CleRt_RS02530	CleRT_04830		CleRt_RS02530	520365	521414	+	deoxyhypusine synthase	transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine	gene	gene538	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02530
CleRt_RS02535	CleRT_04840		CleRt_RS02535	521423	522304	+	agmatinase		gene	gene539	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02535
CleRt_RS02540	CleRt_RS02540		CleRt_RS02540	523218	523601	-	hypothetical protein		gene	gene540	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02540
CleRt_RS02545	CleRt_RS02545		CleRt_RS02545	523801	524118	-	hypothetical protein		gene	gene541	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02545
CleRt_RS02555	CleRT_04880		CleRt_RS02555	525402	526202	+	ABC transporter ATP-binding protein	frameshifted%3B internal stop	pseudogene	gene543	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02555
CleRt_RS02560	CleRt_RS02560		CleRt_RS02560	526214	526639	+	MCE family protein		gene	gene544	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02560
CleRt_RS02570	CleRT_04930		CleRt_RS02570	528873	529334	-	hypothetical protein		gene	gene547	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02570
CleRt_RS02575	CleRT_t013		CleRt_RS02575	529585	529670	+	tRNA-Leu		tRNA	gene548	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02575
CleRt_RS02580	CleRT_04940		CleRt_RS02580	529786	531102	+	trigger factor		gene	gene549	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02580
CleRt_RS02585	CleRT_04950		CleRt_RS02585	531105	531692	+	ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP		gene	gene550	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02585
CleRt_RS02590	CleRT_04960		CleRt_RS02590	531748	533010	+	ATP-dependent Clp protease ATP-binding subunit ClpX		gene	gene551	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02590
CleRt_RS02595	CleRT_04970		CleRt_RS02595	533024	535477	+	endopeptidase La		gene	gene552	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02595
CleRt_RS02600	CleRT_04980		CleRt_RS02600	535493	536815	+	metalloprotease PmbA		gene	gene553	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02600
CleRt_RS02605	CleRT_05000		CleRt_RS02605	537587	537829	+	hypothetical protein		gene	gene554	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02605
CleRt_RS02610	CleRT_05020		CleRt_RS02610	538866	539135	-	HPr family phosphocarrier protein		gene	gene555	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02610
CleRt_RS02615	CleRT_05030		CleRt_RS02615	539145	539678	-	serine kinase		gene	gene556	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02615
CleRt_RS02620	CleRT_05040		CleRt_RS02620	539702	539992	-	ribosomal subunit interface protein		gene	gene557	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02620
CleRt_RS02625	CleRT_05050		CleRt_RS02625	540059	540781	-	LPS export ABC transporter ATP-binding protein		gene	gene558	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02625
CleRt_RS02630	CleRT_05060		CleRt_RS02630	540787	541240	-	lipopolysaccharide transport periplasmic protein LptA	frameshifted	pseudogene	gene559	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02630
CleRt_RS02635	CleRT_05070		CleRt_RS02635	541289	541873	-	LPS export ABC transporter periplasmic protein LptC		gene	gene560	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02635
CleRt_RS02640	CleRT_05080		CleRt_RS02640	541870	542367	-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase		gene	gene561	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02640
CleRt_RS02645	CleRT_05090		CleRt_RS02645	542373	543347	-	KpsF/GutQ family sugar-phosphate isomerase		gene	gene562	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02645
CleRt_RS02650	CleRT_05100		CleRt_RS02650	543421	544209	+	ABC transporter ATP-binding protein	ABC transporter maintaining outer membrane lipid asymmetry	gene	gene563	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02650
CleRt_RS02655	CleRT_05110		CleRt_RS02655	544206	544988	+	ABC transporter permease		gene	gene564	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02655
CleRt_RS02660	CleRT_05120		CleRt_RS02660	545014	545445	+	outer membrane lipid asymmetry maintenance protein MlaD		gene	gene565	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02660
CleRt_RS02665	CleRT_05130		CleRt_RS02665	545483	546136	+	hypothetical protein		gene	gene566	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02665
CleRt_RS02670	CleRT_05140		CleRt_RS02670	546136	546411	+	anti-sigma factor antagonist		gene	gene567	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02670
CleRt_RS02675	CleRT_05150		CleRt_RS02675	546418	547722	+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase		gene	gene568	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02675
CleRt_RS02685	CleRT_05180		CleRt_RS02685	550389	551339	-	efflux transporter periplasmic adaptor subunit	frameshifted%3B internal stop	pseudogene	gene571	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02685
CleRt_RS02690	CleRT_05190		CleRt_RS02690	551349	552701	-	endopeptidase		gene	gene572	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02690
CleRt_RS02695	CleRT_05200		CleRt_RS02695	552760	553484	-	polyphenol oxidase	frameshifted	pseudogene	gene573	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02695
CleRt_RS02700	CleRT_05210		CleRt_RS02700	553468	554433	-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD		gene	gene574	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02700
CleRt_RS02705	CleRT_05220		CleRt_RS02705	554594	555364	+	outer membrane protein assembly factor BamD		gene	gene575	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02705
CleRt_RS02710	CleRT_05230		CleRt_RS02710	555378	555782	-	two-component system response regulator	frameshifted%3B internal stop	pseudogene	gene576	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02710
CleRt_RS02715	CleRT_05260		CleRt_RS02715	556831	557430	+	hypothetical protein	frameshifted	pseudogene	gene578	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02715
CleRt_RS02725	CleRt_RS02725		CleRt_RS02725	558589	558768	+	hypothetical protein		gene	gene580	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02725
CleRt_RS02730	CleRt_RS02730		CleRt_RS02730	559182	559556	+	DUF1974 domain-containing protein		gene	gene582	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02730
CleRt_RS02735	CleRt_RS02735		CleRt_RS02735	560029	560352	+	hypothetical protein		gene	gene583	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02735
CleRt_RS02740	CleRt_RS02740		CleRt_RS02740	561119	561361	+	hypothetical protein		gene	gene584	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02740
CleRt_RS02750	CleRT_t014		CleRt_RS02750	563210	563284	+	tRNA-Val		tRNA	gene587	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02750
CleRt_RS02755	CleRT_05300		CleRt_RS02755	563544	563978	-	hypothetical protein		gene	gene588	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02755
CleRt_RS02760	CleRt_RS02760		CleRt_RS02760	564354	564578	+	hypothetical protein		gene	gene589	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02760
CleRt_RS02765	CleRt_RS02765		CleRt_RS02765	565307	565558	+	hypothetical protein		gene	gene590	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02765
CleRt_RS02770	CleRT_05320		CleRt_RS02770	565555	566421	-	aminodeoxychorismate lyase		gene	gene591	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02770
CleRt_RS02775	CleRT_05330		CleRt_RS02775	566393	566986	-	type 1 glutamine amidotransferase	TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity	gene	gene592	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02775
CleRt_RS02780	CleRT_05340		CleRt_RS02780	567093	568505	+	aminodeoxychorismate synthase%2C component I		gene	gene593	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02780
CleRt_RS02785	CleRT_05350		CleRt_RS02785	568683	568922	+	hypothetical protein		gene	gene594	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02785
CleRt_RS02790	CleRT_05370		CleRt_RS02790	569464	569826	-	hypothetical protein		gene	gene595	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02790
CleRt_RS02795	CleRT_05380		CleRt_RS02795	569887	570174	-	hypothetical protein		gene	gene596	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02795
CleRt_RS02800	CleRT_05390		CleRt_RS02800	570778	571008	-	hypothetical protein		gene	gene597	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02800
CleRt_RS02805	CleRT_05400		CleRt_RS02805	571447	573390	+	threonine--tRNA ligase		gene	gene598	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02805
CleRt_RS02810	CleRT_05410		CleRt_RS02810	573402	573959	+	translation initiation factor IF-3		gene	gene599	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02810
CleRt_RS02815	CleRT_05420		CleRt_RS02815	573940	574134	+	50S ribosomal protein L35		gene	gene600	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02815
CleRt_RS02820	CleRT_05430		CleRt_RS02820	574170	574529	+	50S ribosomal protein L20		gene	gene601	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02820
CleRt_RS02825	CleRT_05440		CleRt_RS02825	574543	575529	+	phenylalanine--tRNA ligase subunit alpha		gene	gene602	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02825
CleRt_RS02830	CleRT_05450		CleRt_RS02830	575533	577914	+	phenylalanine--tRNA ligase subunit beta		gene	gene603	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02830
CleRt_RS02835	CleRT_05460		CleRt_RS02835	577918	578226	+	integration host factor subunit alpha		gene	gene604	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02835
CleRt_RS02840	CleRT_05470		CleRt_RS02840	578198	578575	+	MerR family transcriptional regulator		gene	gene605	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02840
CleRt_RS02845	CleRT_t015		CleRt_RS02845	578963	579036	+	tRNA-Pro		tRNA	gene606	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02845
CleRt_RS02850	CleRt_RS02850		CleRt_RS02850	579325	579549	+	hypothetical protein		gene	gene607	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02850
CleRt_RS02855	CleRT_05500		CleRt_RS02855	579849	580049	+	hypothetical protein		gene	gene608	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02855
CleRt_RS02860	CleRT_05510		CleRt_RS02860	580153	580428	+	hypothetical protein		gene	gene609	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02860
CleRt_RS02865	CleRT_05520		CleRt_RS02865	580735	580956	+	hypothetical protein		gene	gene610	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02865
CleRt_RS02870	CleRT_05530		CleRt_RS02870	582024	582275	+	hypothetical protein		gene	gene611	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02870
CleRt_RS02875	CleRt_RS02875		CleRt_RS02875	583425	583646	-	hypothetical protein		gene	gene612	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02875
CleRt_RS02880	CleRt_RS02880		CleRt_RS02880	585310	585897	-	hypothetical protein		gene	gene613	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02880
CleRt_RS02885	CleRt_RS02885		CleRt_RS02885	585967	586269	+	hypothetical protein		gene	gene614	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02885
CleRt_RS02890	CleRt_RS02890		CleRt_RS02890	586647	586832	+	hypothetical protein		gene	gene615	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02890
CleRt_RS02895	CleRt_RS02895		CleRt_RS02895	587178	587537	+	hypothetical protein		gene	gene616	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02895
CleRt_RS02900	CleRT_05610		CleRt_RS02900	590103	590855	+	3-deoxy-manno-octulosonate cytidylyltransferase		gene	gene620	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02900
CleRt_RS02905	CleRt_RS02905		CleRt_RS02905	591116	591469	+	hypothetical protein		gene	gene621	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02905
CleRt_RS02910	CleRT_05630		CleRt_RS02910	591610	592158	-	hypothetical protein	internal stop	pseudogene	gene622	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02910
CleRt_RS02915	CleRt_RS02915		CleRt_RS02915	592446	592670	-	hypothetical protein		gene	gene623	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02915
CleRt_RS02925	CleRT_05650		CleRt_RS02925	594240	596645	+	outer membrane protein assembly factor BamA		gene	gene625	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02925
CleRt_RS02930	CleRT_05660		CleRt_RS02930	596724	597221	+	membrane protein		gene	gene626	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02930
CleRt_RS02935	CleRT_05670		CleRt_RS02935	597236	598288	+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase		gene	gene627	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02935
CleRt_RS02940	CleRT_05680		CleRt_RS02940	598260	598706	+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ		gene	gene628	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02940
CleRt_RS02945	CleRT_05690		CleRt_RS02945	598699	599511	+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase		gene	gene629	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02945
CleRt_RS02955	CleRT_05720		CleRt_RS02955	601898	603034	-	lipid-A-disaccharide synthase		gene	gene634	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02955
CleRt_RS02960	CleRT_05730		CleRt_RS02960	603036	604010	-	gfo/Idh/MocA family oxidoreductase		gene	gene635	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02960
CleRt_RS02965	CleRT_05740		CleRt_RS02965	604220	604710	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene636	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02965
CleRt_RS02970	CleRT_05750		CleRt_RS02970	604717	604863	-	entericidin%2C EcnA/B family		gene	gene637	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02970
CleRt_RS02975	CleRT_05760		CleRt_RS02975	605020	605466	+	tRNA adenosine(34) deaminase TadA		gene	gene638	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02975
CleRt_RS02980	CleRT_05770		CleRt_RS02980	606878	607405	+	inorganic diphosphatase		gene	gene639	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02980
CleRt_RS02985	CleRT_05780		CleRt_RS02985	607420	610563	+	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA		gene	gene640	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02985
CleRt_RS02990	CleRT_05790		CleRt_RS02990	610701	611392	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene641	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02990
CleRt_RS02995	CleRT_05800		CleRt_RS02995	611540	615382	+	phosphoribosylformylglycinamidine synthase	frameshifted%3B internal stop	pseudogene	gene642	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS02995
CleRt_RS03000	CleRt_RS03000		CleRt_RS03000	615566	615871	+	hypothetical protein		gene	gene643	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03000
CleRt_RS03005	CleRT_05820		CleRt_RS03005	617860	618261	+	hypothetical protein		gene	gene644	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03005
CleRt_RS03010	CleRt_RS03010		CleRt_RS03010	618733	619095	+	hypothetical protein		gene	gene645	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03010
CleRt_RS03015	CleRt_RS03015		CleRt_RS03015	619450	619770	+	ATP-binding protein		gene	gene646	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03015
CleRt_RS03020	CleRT_05840		CleRt_RS03020	620527	620712	-	hypothetical protein		gene	gene647	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03020
CleRt_RS03025	CleRT_05850		CleRt_RS03025	620828	621964	-	2-oxo acid dehydrogenase subunit E2		gene	gene648	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03025
CleRt_RS03030	CleRT_05860		CleRt_RS03030	621964	622944	-	alpha-ketoacid dehydrogenase subunit beta		gene	gene649	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03030
CleRt_RS03035	CleRT_05870		CleRt_RS03035	622941	624023	-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha		gene	gene650	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03035
CleRt_RS03040	CleRT_05880		CleRt_RS03040	624020	625120	-	Glu/Leu/Phe/Val dehydrogenase		gene	gene651	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03040
CleRt_RS03045	CleRT_05890		CleRt_RS03045	625182	625943	+	glycerophosphoryl diester phosphodiesterase	frameshifted%3B internal stop	pseudogene	gene652	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03045
CleRt_RS03050	CleRT_05900		CleRt_RS03050	625943	627007	+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD		gene	gene653	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03050
CleRt_RS03055	CleRT_05910		CleRt_RS03055	627366	627974	+	riboflavin synthase		gene	gene654	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03055
CleRt_RS03060	CleRT_05920		CleRt_RS03060	627958	629193	+	bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II		gene	gene655	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03060
CleRt_RS03065	CleRT_05930		CleRt_RS03065	629177	629626	+	6%2C7-dimethyl-8-ribityllumazine synthase		gene	gene656	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03065
CleRt_RS03070	CleRT_05940		CleRt_RS03070	629619	630752	+	AI-2E family transporter		gene	gene657	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03070
CleRt_RS03075	CleRT_05950		CleRt_RS03075	630778	631116	-	nucleoid-associated protein%2C YbaB/EbfC family		gene	gene658	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03075
CleRt_RS03080	CleRT_05960		CleRt_RS03080	631132	631740	-	recombination protein RecR		gene	gene659	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03080
CleRt_RS03085	CleRT_05970		CleRt_RS03085	631752	632160	-	hypothetical protein	frameshifted	pseudogene	gene660	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03085
CleRt_RS03090	CleRT_05980		CleRt_RS03090	632208	633746	-	DNA polymerase III subunit gamma/tau		gene	gene661	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03090
CleRt_RS03100	CleRT_t016		CleRt_RS03100	633974	634064	-	tRNA-Ser		tRNA	gene663	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03100
CleRt_RS03105	CleRT_05990		CleRt_RS03105	634306	635434	-	succinyl-diaminopimelate desuccinylase	frameshifted	pseudogene	gene664	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03105
CleRt_RS03110	CleRT_06000		CleRt_RS03110	635436	636254	-	2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase		gene	gene665	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03110
CleRt_RS03115	CleRT_t017		CleRt_RS03115	636432	636505	+	tRNA-Pro		tRNA	gene666	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03115
CleRt_RS03120	CleRT_t018		CleRt_RS03120	636596	636669	+	tRNA-Arg		tRNA	gene667	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03120
CleRt_RS03125	CleRT_t019		CleRt_RS03125	636753	636830	+	tRNA-His		tRNA	gene668	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03125
CleRt_RS03130	CleRT_06010		CleRt_RS03130	636877	638307	+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase		gene	gene669	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03130
CleRt_RS03135	CleRT_06020		CleRt_RS03135	638361	640286	-	hypothetical protein		gene	gene670	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03135
CleRt_RS03140	CleRT_06030		CleRt_RS03140	640309	642087	-	asparagine synthase (glutamine-hydrolyzing)		gene	gene671	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03140
CleRt_RS03145	CleRT_06040		CleRt_RS03145	642239	642601	-	hypothetical protein		gene	gene672	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03145
CleRt_RS03150	CleRT_06050		CleRt_RS03150	642675	643175	-	hypothetical protein		gene	gene673	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03150
CleRt_RS03155	CleRt_RS03155		CleRt_RS03155	643433	643651	+	hypothetical protein		gene	gene674	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03155
CleRt_RS03160	CleRT_06070		CleRt_RS03160	644775	646808	-	hypothetical protein		gene	gene675	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03160
CleRt_RS03165	CleRT_06080		CleRt_RS03165	646833	647600	-	hypothetical protein		gene	gene676	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03165
CleRt_RS03170	CleRT_06090		CleRt_RS03170	647619	648410	-	hypothetical protein		gene	gene677	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03170
CleRt_RS03175	CleRT_06110		CleRt_RS03175	649835	650113	+	hypothetical protein		gene	gene678	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03175
CleRt_RS03185	CleRt_RS03185		CleRt_RS03185	651347	651652	+	hypothetical protein		gene	gene680	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03185
CleRt_RS03190	CleRt_RS03190		CleRt_RS03190	651856	652644	+	hypothetical protein		gene	gene682	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03190
CleRt_RS03195	CleRt_RS03195		CleRt_RS03195	652993	653277	+	hypothetical protein		gene	gene683	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03195
CleRt_RS03200	CleRt_RS03200		CleRt_RS03200	655129	655338	+	hypothetical protein		gene	gene685	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03200
CleRt_RS03205	CleRt_RS03205		CleRt_RS03205	656139	656336	-	hypothetical protein		gene	gene686	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03205
CleRt_RS03210	CleRt_RS03210		CleRt_RS03210	660092	660301	+	hypothetical protein		gene	gene687	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03210
CleRt_RS03215	CleRt_RS03215		CleRt_RS03215	660442	660675	+	hypothetical protein		gene	gene688	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03215
CleRt_RS03220	CleRt_RS03220		CleRt_RS03220	660657	660917	+	nitronate monooxygenase		gene	gene689	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03220
CleRt_RS03225	CleRT_06210		CleRt_RS03225	662143	662478	+	hypothetical protein		gene	gene691	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03225
CleRt_RS03230	CleRT_t020		CleRt_RS03230	663097	663169	+	tRNA-Lys		tRNA	gene692	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03230
CleRt_RS03235	CleRt_RS03235		CleRt_RS03235	663243	663545	-	site-specific integrase		gene	gene693	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03235
CleRt_RS03240	CleRt_RS03240		CleRt_RS03240	663532	663822	-	hypothetical protein		gene	gene694	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03240
CleRt_RS03245	CleRt_RS03245		CleRt_RS03245	663848	664120	-	hypothetical protein		gene	gene695	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03245
CleRt_RS03250	CleRT_06240		CleRt_RS03250	665703	665978	-	hypothetical protein		gene	gene696	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03250
CleRt_RS03255	CleRT_06250		CleRt_RS03255	665950	666354	-	DUF3775 domain-containing protein		gene	gene697	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03255
CleRt_RS03260	CleRT_06260		CleRt_RS03260	666625	667815	+	type III PLP-dependent enzyme		gene	gene698	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03260
CleRt_RS03265	CleRT_06270		CleRt_RS03265	667844	668893	+	deoxyhypusine synthase	transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine	gene	gene699	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03265
CleRt_RS03270	CleRT_06280		CleRt_RS03270	668902	669783	+	agmatinase		gene	gene700	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03270
CleRt_RS03275	CleRt_RS03275		CleRt_RS03275	670697	671080	-	hypothetical protein		gene	gene701	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03275
CleRt_RS03280	CleRt_RS03280		CleRt_RS03280	671280	671597	-	hypothetical protein		gene	gene702	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03280
CleRt_RS03290	CleRT_06320		CleRt_RS03290	672881	673681	+	ABC transporter ATP-binding protein	frameshifted%3B internal stop	pseudogene	gene704	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03290
CleRt_RS03295	CleRt_RS03295		CleRt_RS03295	673693	674118	+	MCE family protein		gene	gene705	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03295
CleRt_RS03305	CleRT_06370		CleRt_RS03305	676352	676813	-	hypothetical protein		gene	gene708	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03305
CleRt_RS03310	CleRT_t021		CleRt_RS03310	677064	677149	+	tRNA-Leu		tRNA	gene709	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03310
CleRt_RS03315	CleRT_06380		CleRt_RS03315	677265	678581	+	trigger factor		gene	gene710	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03315
CleRt_RS03320	CleRT_06390		CleRt_RS03320	678584	679171	+	ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP		gene	gene711	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03320
CleRt_RS03325	CleRT_06400		CleRt_RS03325	679227	680489	+	ATP-dependent Clp protease ATP-binding subunit ClpX		gene	gene712	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03325
CleRt_RS03330	CleRT_06410		CleRt_RS03330	680503	682956	+	endopeptidase La		gene	gene713	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03330
CleRt_RS03335	CleRT_06420		CleRt_RS03335	682972	684294	+	metalloprotease PmbA		gene	gene714	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03335
CleRt_RS03340	CleRT_06440		CleRt_RS03340	685066	685308	+	hypothetical protein		gene	gene715	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03340
CleRt_RS03345	CleRT_06460		CleRt_RS03345	686345	686614	-	HPr family phosphocarrier protein		gene	gene716	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03345
CleRt_RS03350	CleRT_06470		CleRt_RS03350	686624	687157	-	serine kinase		gene	gene717	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03350
CleRt_RS03355	CleRT_06480		CleRt_RS03355	687181	687471	-	ribosomal subunit interface protein		gene	gene718	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03355
CleRt_RS03360	CleRT_06490		CleRt_RS03360	687538	688260	-	LPS export ABC transporter ATP-binding protein		gene	gene719	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03360
CleRt_RS03365	CleRT_06500		CleRt_RS03365	688266	688719	-	lipopolysaccharide transport periplasmic protein LptA	frameshifted	pseudogene	gene720	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03365
CleRt_RS03370	CleRT_06510		CleRt_RS03370	688768	689352	-	LPS export ABC transporter periplasmic protein LptC		gene	gene721	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03370
CleRt_RS03375	CleRT_06520		CleRt_RS03375	689349	689846	-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase		gene	gene722	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03375
CleRt_RS03380	CleRT_06530		CleRt_RS03380	689852	690826	-	KpsF/GutQ family sugar-phosphate isomerase		gene	gene723	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03380
CleRt_RS03385	CleRT_06540		CleRt_RS03385	690900	691688	+	ABC transporter ATP-binding protein	ABC transporter maintaining outer membrane lipid asymmetry	gene	gene724	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03385
CleRt_RS03390	CleRT_06550		CleRt_RS03390	691685	692467	+	ABC transporter permease		gene	gene725	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03390
CleRt_RS03395	CleRT_06560		CleRt_RS03395	692493	692924	+	outer membrane lipid asymmetry maintenance protein MlaD		gene	gene726	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03395
CleRt_RS03400	CleRT_06570		CleRt_RS03400	692962	693615	+	hypothetical protein		gene	gene727	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03400
CleRt_RS03405	CleRT_06580		CleRt_RS03405	693615	693890	+	anti-sigma factor antagonist		gene	gene728	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03405
CleRt_RS03410	CleRT_06590		CleRt_RS03410	693897	695201	+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase		gene	gene729	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03410
CleRt_RS03420	CleRT_06620		CleRt_RS03420	697868	698818	-	efflux transporter periplasmic adaptor subunit	frameshifted%3B internal stop	pseudogene	gene732	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03420
CleRt_RS03425	CleRT_06630		CleRt_RS03425	698828	700180	-	endopeptidase		gene	gene733	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03425
CleRt_RS03430	CleRT_06640		CleRt_RS03430	700239	700963	-	polyphenol oxidase	frameshifted	pseudogene	gene734	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03430
CleRt_RS03435	CleRT_06650		CleRt_RS03435	700947	701912	-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD		gene	gene735	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03435
CleRt_RS03440	CleRT_06660		CleRt_RS03440	702073	702843	+	outer membrane protein assembly factor BamD		gene	gene736	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03440
CleRt_RS03445	CleRT_06670		CleRt_RS03445	702857	703261	-	two-component system response regulator	frameshifted%3B internal stop	pseudogene	gene737	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03445
CleRt_RS03450	CleRT_06700		CleRt_RS03450	704310	704909	+	hypothetical protein	frameshifted	pseudogene	gene739	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03450
CleRt_RS03460	CleRt_RS03460		CleRt_RS03460	706068	706247	+	hypothetical protein		gene	gene741	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03460
CleRt_RS03465	CleRt_RS03465		CleRt_RS03465	706661	707035	+	DUF1974 domain-containing protein		gene	gene743	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03465
CleRt_RS03470	CleRt_RS03470		CleRt_RS03470	707508	707831	+	hypothetical protein		gene	gene744	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03470
CleRt_RS03475	CleRt_RS03475		CleRt_RS03475	708598	708840	+	hypothetical protein		gene	gene745	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03475
CleRt_RS03485	CleRT_t022		CleRt_RS03485	710689	710763	+	tRNA-Val		tRNA	gene748	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03485
CleRt_RS03490	CleRT_06740		CleRt_RS03490	711023	711457	-	hypothetical protein		gene	gene749	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03490
CleRt_RS03495	CleRt_RS03495		CleRt_RS03495	711833	712057	+	hypothetical protein		gene	gene750	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03495
CleRt_RS03500	CleRt_RS03500		CleRt_RS03500	712786	713037	+	hypothetical protein		gene	gene751	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03500
CleRt_RS03505	CleRT_06760		CleRt_RS03505	713034	713900	-	aminodeoxychorismate lyase		gene	gene752	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03505
CleRt_RS03510	CleRT_06770		CleRt_RS03510	713872	714465	-	type 1 glutamine amidotransferase	TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity	gene	gene753	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03510
CleRt_RS03515	CleRT_06780		CleRt_RS03515	714572	715984	+	aminodeoxychorismate synthase%2C component I		gene	gene754	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03515
CleRt_RS03520	CleRT_06790		CleRt_RS03520	716162	716401	+	hypothetical protein		gene	gene755	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03520
CleRt_RS03525	CleRT_06810		CleRt_RS03525	716943	717305	-	hypothetical protein		gene	gene756	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03525
CleRt_RS03530	CleRT_06820		CleRt_RS03530	717366	717653	-	hypothetical protein		gene	gene757	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03530
CleRt_RS03535	CleRT_06830		CleRt_RS03535	718257	718487	-	hypothetical protein		gene	gene758	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03535
CleRt_RS03540	CleRT_06840		CleRt_RS03540	718926	720869	+	threonine--tRNA ligase		gene	gene759	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03540
CleRt_RS03545	CleRT_06850		CleRt_RS03545	720881	721438	+	translation initiation factor IF-3		gene	gene760	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03545
CleRt_RS03550	CleRT_06860		CleRt_RS03550	721419	721613	+	50S ribosomal protein L35		gene	gene761	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03550
CleRt_RS03555	CleRT_06870		CleRt_RS03555	721649	722008	+	50S ribosomal protein L20		gene	gene762	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03555
CleRt_RS03560	CleRT_06880		CleRt_RS03560	722022	723008	+	phenylalanine--tRNA ligase subunit alpha		gene	gene763	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03560
CleRt_RS03565	CleRT_06890		CleRt_RS03565	723012	725393	+	phenylalanine--tRNA ligase subunit beta		gene	gene764	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03565
CleRt_RS03570	CleRT_06900		CleRt_RS03570	725397	725705	+	integration host factor subunit alpha		gene	gene765	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03570
CleRt_RS03575	CleRT_06910		CleRt_RS03575	725677	726054	+	MerR family transcriptional regulator		gene	gene766	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03575
CleRt_RS03580	CleRT_t023		CleRt_RS03580	726442	726515	+	tRNA-Pro		tRNA	gene767	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03580
CleRt_RS03585	CleRt_RS03585		CleRt_RS03585	726804	727028	+	hypothetical protein		gene	gene768	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03585
CleRt_RS03590	CleRT_06940		CleRt_RS03590	727328	727528	+	hypothetical protein		gene	gene769	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03590
CleRt_RS03595	CleRT_06950		CleRt_RS03595	727632	727907	+	hypothetical protein		gene	gene770	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03595
CleRt_RS03600	CleRT_06960		CleRt_RS03600	728214	728435	+	hypothetical protein		gene	gene771	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03600
CleRt_RS03605	CleRT_06970		CleRt_RS03605	729503	729754	+	hypothetical protein		gene	gene772	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03605
CleRt_RS03610	CleRt_RS03610		CleRt_RS03610	730904	731125	-	hypothetical protein		gene	gene773	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03610
CleRt_RS03615	CleRt_RS03615		CleRt_RS03615	732789	733376	-	hypothetical protein		gene	gene774	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03615
CleRt_RS03620	CleRt_RS03620		CleRt_RS03620	733446	733748	+	hypothetical protein		gene	gene775	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03620
CleRt_RS03625	CleRt_RS03625		CleRt_RS03625	734126	734311	+	hypothetical protein		gene	gene776	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03625
CleRt_RS03630	CleRt_RS03630		CleRt_RS03630	734657	735016	+	hypothetical protein		gene	gene777	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03630
CleRt_RS03635	CleRT_07050		CleRt_RS03635	737582	738334	+	3-deoxy-manno-octulosonate cytidylyltransferase		gene	gene781	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03635
CleRt_RS03645	CleRT_07070		CleRt_RS03645	739063	739611	-	hypothetical protein	internal stop	pseudogene	gene783	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03645
CleRt_RS03650	CleRt_RS03650		CleRt_RS03650	739899	740123	-	hypothetical protein		gene	gene784	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03650
CleRt_RS03665	CleRT_07090		CleRt_RS03665	741750	743922	-	ribonuclease E	frameshifted	pseudogene	gene786	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03665
CleRt_RS03670	CleRT_07100		CleRt_RS03670	744318	745238	+	RluA family pseudouridine synthase		gene	gene787	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03670
CleRt_RS03675	CleRT_07120		CleRt_RS03675	746095	747163	-	phospholipase	frameshifted%3B internal stop	pseudogene	gene789	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03675
CleRt_RS03680	CleRT_07130		CleRt_RS03680	747200	748936	-	DNA polymerase III	frameshifted%3B internal stop	pseudogene	gene790	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03680
CleRt_RS03685	CleRt_RS03685		CleRt_RS03685	749196	749375	+	hypothetical protein		gene	gene791	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03685
CleRt_RS03690	CleRT_07140		CleRt_RS03690	749527	749721	+	50S ribosomal protein L32		gene	gene792	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03690
CleRt_RS03695	CleRT_07150		CleRt_RS03695	749728	750753	+	phosphate acyltransferase PlsX		gene	gene793	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03695
CleRt_RS03700	CleRT_07160		CleRt_RS03700	750753	751715	+	ketoacyl-ACP synthase III	FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs	gene	gene794	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03700
CleRt_RS03705	CleRT_07170		CleRt_RS03705	751734	752672	+	[acyl-carrier-protein] S-malonyltransferase		gene	gene795	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03705
CleRt_RS03710	CleRT_07180	fabG	fabG	752710	753453	+	3-oxoacyl-ACP reductase FabG	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis	gene	gene796	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03710
CleRt_RS03715	CleRT_07190		CleRt_RS03715	753530	753781	+	acyl carrier protein		gene	gene797	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03715
CleRt_RS03720	CleRT_07200		CleRt_RS03720	753836	755074	+	beta-ketoacyl-[acyl-carrier-protein] synthase II		gene	gene798	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03720
CleRt_RS03725	CleRT_07210		CleRt_RS03725	755080	756216	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene799	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03725
CleRt_RS03730	CleRT_07220		CleRt_RS03730	756165	756812	+	dTMP kinase		gene	gene800	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03730
CleRt_RS03735	CleRT_07230		CleRt_RS03735	756833	757807	+	DNA polymerase III subunit delta'		gene	gene801	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03735
CleRt_RS03740	CleRT_07240		CleRt_RS03740	757801	758574	+	TatD family deoxyribonuclease		gene	gene802	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03740
CleRt_RS03745	CleRT_07250		CleRt_RS03745	758699	759786	-	glutamine synthetase	frameshifted%3B internal stop	pseudogene	gene803	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03745
CleRt_RS03750	CleRT_07260		CleRt_RS03750	759808	761247	-	MFS transporter		gene	gene804	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03750
CleRt_RS03755	CleRT_07270		CleRt_RS03755	761377	761916	-	N-acetyltransferase		gene	gene805	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03755
CleRt_RS03760	CleRT_07280		CleRt_RS03760	762336	764069	+	single-stranded-DNA-specific exonuclease RecJ		gene	gene806	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03760
CleRt_RS03765	CleRT_07290		CleRt_RS03765	764169	764464	+	Trp operon repressor	frameshifted	pseudogene	gene807	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03765
CleRt_RS03770	CleRT_07300		CleRt_RS03770	764467	764721	+	hypothetical protein	incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene808	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03770
CleRt_RS03775	CleRT_07310		CleRt_RS03775	764840	766143	-	MFS transporter	frameshifted%3B internal stop	pseudogene	gene809	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03775
CleRt_RS03780	CleRT_07320		CleRt_RS03780	766160	767149	-	peptidase M14	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene810	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03780
CleRt_RS03785	CleRT_07330		CleRt_RS03785	767387	768578	+	fructose 1%2C6-bisphosphatase	catalyzes the formation of fructose-6-phosphate from fructose-1%2C6-bisphosphate%3B frameshifted%3B internal stop	pseudogene	gene811	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03785
CleRt_RS03795	CleRt_RS03795		CleRt_RS03795	771003	771209	-	hypothetical protein		gene	gene814	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03795
CleRt_RS03800	CleRt_RS03800		CleRt_RS03800	772648	772923	+	hypothetical protein		gene	gene815	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03800
CleRt_RS03805	CleRT_t024		CleRt_RS03805	773834	773909	-	tRNA-Asn		tRNA	gene816	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03805
CleRt_RS03810	CleRT_07390		CleRt_RS03810	774032	775216	-	pyridoxal phosphate-dependent aminotransferase	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate	gene	gene817	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03810
CleRt_RS03815	CleRT_07400		CleRt_RS03815	775323	777359	+	excinuclease ABC subunit UvrB		gene	gene818	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03815
CleRt_RS03820	CleRT_07420		CleRt_RS03820	778046	778963	-	hydroxymethylglutaryl-CoA lyase	catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA	gene	gene820	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03820
CleRt_RS03825	CleRT_07430		CleRt_RS03825	778963	780312	-	N-ethylammeline chlorohydrolase	Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline	gene	gene821	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03825
CleRt_RS03830	CleRT_07440		CleRt_RS03830	780503	783046	+	DNA gyrase subunit A		gene	gene822	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03830
CleRt_RS03835	CleRT_07450		CleRt_RS03835	783077	784159	+	3-phosphoserine/phosphohydroxythreonine transaminase		gene	gene823	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03835
CleRt_RS03840	CleRT_07460		CleRt_RS03840	784164	785462	+	3-phosphoshikimate 1-carboxyvinyltransferase		gene	gene824	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03840
CleRt_RS03845	CleRT_07470		CleRt_RS03845	785504	786199	+	(d)CMP kinase		gene	gene825	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03845
CleRt_RS03850	CleRT_07480		CleRt_RS03850	786291	787940	+	30S ribosomal protein S1		gene	gene826	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03850
CleRt_RS03855	CleRT_07490		CleRt_RS03855	788167	788457	+	DUF1049 domain-containing protein		gene	gene827	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03855
CleRt_RS03860	CleRT_07500		CleRt_RS03860	788457	789623	+	lipopolysaccharide assembly protein LapB		gene	gene828	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03860
CleRt_RS03865	CleRT_07510		CleRt_RS03865	789625	790341	+	orotidine-5'-phosphate decarboxylase		gene	gene829	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03865
CleRt_RS03870	CleRT_07530		CleRt_RS03870	790852	791922	+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase		gene	gene831	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03870
CleRt_RS03885	CleRt_RS03885		CleRt_RS03885	794068	794331	-	hypothetical protein		gene	gene833	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03885
CleRt_RS03890	CleRt_RS03890		CleRt_RS03890	794774	794986	-	hypothetical protein		gene	gene834	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03890
CleRt_RS03895	CleRT_07560		CleRt_RS03895	795079	796449	+	RIP metalloprotease RseP		gene	gene835	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03895
CleRt_RS03900	CleRt_RS03900		CleRt_RS03900	797338	797517	+	hypothetical protein		gene	gene836	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03900
CleRt_RS03905	CleRt_RS03905		CleRt_RS03905	797824	798069	+	hypothetical protein		gene	gene837	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03905
CleRt_RS03910	CleRT_07580	tppB	tppB	798160	799683	+	MFS transporter	mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation	gene	gene838	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03910
CleRt_RS03915	CleRT_07590		CleRt_RS03915	799790	803302	+	chromosome segregation protein SMC		gene	gene839	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03915
CleRt_RS03925	CleRT_07610	ligA	ligA	803881	805893	+	NAD-dependent DNA ligase LigA	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB	gene	gene841	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03925
CleRt_RS03930	CleRt_RS03930		CleRt_RS03930	806862	807125	+	hypothetical protein		gene	gene842	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03930
CleRt_RS03935	CleRt_RS03935		CleRt_RS03935	807155	807568	+	hypothetical protein		gene	gene843	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03935
CleRt_RS03940	CleRt_RS03940		CleRt_RS03940	808082	808330	+	hypothetical protein		gene	gene844	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03940
CleRt_RS03945	CleRt_RS03945		CleRt_RS03945	808493	808735	+	hypothetical protein		gene	gene845	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03945
CleRt_RS03950	CleRT_07620		CleRt_RS03950	808750	809067	+	hypothetical protein		gene	gene846	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03950
CleRt_RS03955	CleRT_07630		CleRt_RS03955	809572	810150	+	LemA family protein		gene	gene847	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03955
CleRt_RS03960	CleRT_07640		CleRt_RS03960	810159	811199	+	zinc metalloprotease HtpX		gene	gene848	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03960
CleRt_RS03965	CleRT_07650		CleRt_RS03965	811229	812941	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene849	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03965
CleRt_RS03970	CleRT_07660		CleRt_RS03970	812922	813923	-	lytic murein transglycosylase B		gene	gene850	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03970
CleRt_RS03975	CleRT_07670		CleRt_RS03975	813992	815140	-	rod shape-determining protein RodA		gene	gene851	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03975
CleRt_RS03980	CleRT_07680		CleRt_RS03980	815137	816978	-	penicillin-binding protein 2		gene	gene852	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03980
CleRt_RS03985	CleRT_07690		CleRt_RS03985	816996	817447	-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	frameshifted	pseudogene	gene853	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03985
CleRt_RS03990	CleRT_07700		CleRt_RS03990	817452	817787	-	ribosome silencing factor		gene	gene854	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03990
CleRt_RS03995	CleRT_07720		CleRt_RS03995	818477	819118	-	nicotinate-nucleotide adenylyltransferase		gene	gene855	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS03995
CleRt_RS04000	CleRT_07730		CleRt_RS04000	819115	820128	-	DNA polymerase III subunit delta		gene	gene856	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04000
CleRt_RS04005	CleRT_07740		CleRt_RS04005	820189	820713	-	lipoprotein		gene	gene857	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04005
CleRt_RS04010	CleRT_07750		CleRt_RS04010	820719	823181	-	leucine--tRNA ligase		gene	gene858	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04010
CleRt_RS04015	CleRT_07760		CleRt_RS04015	823438	824664	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene859	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04015
CleRt_RS04020	CleRT_07770		CleRt_RS04020	824636	826105	-	apolipoprotein N-acyltransferase		gene	gene860	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04020
CleRt_RS04025	CleRT_07780		CleRt_RS04025	826098	826906	-	magnesium/cobalt efflux protein	frameshifted%3B internal stop	pseudogene	gene861	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04025
CleRt_RS04030	CleRT_07790		CleRt_RS04030	826951	827430	-	rRNA maturation RNase YbeY		gene	gene862	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04030
CleRt_RS04035	CleRT_07800		CleRt_RS04035	827414	828401	-	phosphate starvation-inducible protein PhoH	frameshifted	pseudogene	gene863	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04035
CleRt_RS04040	CleRT_07810		CleRt_RS04040	828412	829731	-	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB		gene	gene864	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04040
CleRt_RS04045	CleRT_07820		CleRt_RS04045	829837	831486	-	APC family permease		gene	gene865	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04045
CleRt_RS04050	CleRT_07840		CleRt_RS04050	832722	834599	+	crotonase	frameshifted%3B internal stop	pseudogene	gene867	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04050
CleRt_RS04060	CleRT_07870		CleRt_RS04060	836177	836512	-	ferredoxin family protein		gene	gene869	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04060
CleRt_RS04065	CleRT_07880		CleRt_RS04065	836628	836873	+	BolA family transcriptional regulator		gene	gene870	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04065
CleRt_RS04070	CleRT_07890		CleRt_RS04070	837006	837314	+	monothiol glutaredoxin%2C Grx4 family		gene	gene871	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04070
CleRt_RS04075	CleRT_07900		CleRt_RS04075	837318	837518	-	hypothetical protein		gene	gene872	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04075
CleRt_RS04080	CleRT_07910		CleRt_RS04080	837576	841094	+	pyridine nucleotide-disulfide oxidoreductase		gene	gene873	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04080
CleRt_RS04085	CleRT_07920		CleRt_RS04085	841431	842366	+	quinolinate synthase	3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate%3B frameshifted%3B internal stop	pseudogene	gene875	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04085
CleRt_RS04090	CleRT_07930		CleRt_RS04090	842353	842704	+	ferredoxin	frameshifted%3B internal stop	pseudogene	gene876	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04090
CleRt_RS04095	CleRT_07940		CleRt_RS04095	842727	843551	+	DUF2797 domain-containing protein		gene	gene877	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04095
CleRt_RS04100	CleRT_07950		CleRt_RS04100	843552	843848	+	hypothetical protein		gene	gene878	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04100
CleRt_RS04105	CleRt_RS04105		CleRt_RS04105	846230	846424	-	hypothetical protein		gene	gene880	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04105
CleRt_RS04110	CleRt_RS04110		CleRt_RS04110	847543	847776	-	hypothetical protein		gene	gene881	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04110
CleRt_RS04115	CleRT_08000		CleRt_RS04115	849408	850531	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene882	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04115
CleRt_RS04125	CleRT_08020		CleRt_RS04125	851638	852778	-	YggW family oxidoreductase	frameshifted%3B internal stop	pseudogene	gene885	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04125
CleRt_RS04130	CleRT_08030		CleRt_RS04130	852828	853370	+	ADP compounds hydrolase NudE		gene	gene886	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04130
CleRt_RS04135	CleRT_08040		CleRt_RS04135	853363	854196	+	3'(2')%2C5'-bisphosphate nucleotidase		gene	gene887	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04135
CleRt_RS04140	CleRT_08050		CleRt_RS04140	854193	855185	+	malate dehydrogenase		gene	gene888	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04140
CleRt_RS04145	CleRT_08060		CleRt_RS04145	855959	856984	+	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD		gene	gene889	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04145
CleRt_RS04150	CleRT_08070		CleRt_RS04150	856981	857565	-	acyl-phosphate glycerol 3-phosphate acyltransferase		gene	gene890	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04150
CleRt_RS04155	CleRT_08080		CleRt_RS04155	857654	858199	-	oligoribonuclease		gene	gene891	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04155
CleRt_RS04160	CleRT_08090		CleRt_RS04160	858292	859191	-	5'-nucleotidase		gene	gene892	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04160
CleRt_RS04165	CleRT_08100		CleRt_RS04165	859203	862553	-	ATP-dependent helicase		gene	gene893	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04165
CleRt_RS04170	CleRT_08110		CleRt_RS04170	862550	865093	-	ATP-dependent helicase		gene	gene894	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04170
CleRt_RS04175	CleRT_08120		CleRt_RS04175	865444	866320	-	two-component sensor histidine kinase	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene895	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04175
CleRt_RS04180	CleRT_08130		CleRt_RS04180	866235	866919	-	DNA-binding response regulator	frameshifted%3B internal stop	pseudogene	gene896	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04180
CleRt_RS04185	CleRT_08140		CleRt_RS04185	867155	871960	+	NAD-glutamate dehydrogenase		gene	gene897	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04185
CleRt_RS04190	CleRT_08150		CleRt_RS04190	871970	872815	+	haloalkane dehalogenase	frameshifted%3B internal stop	pseudogene	gene898	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04190
CleRt_RS04195	CleRT_08160		CleRt_RS04195	872920	873117	+	hypothetical protein		gene	gene899	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04195
CleRt_RS04200	CleRT_08170		CleRt_RS04200	873274	874530	-	DNA recombination protein RmuC		gene	gene900	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04200
CleRt_RS04210	CleRT_08190		CleRt_RS04210	875914	876795	+	4-hydroxy-tetrahydrodipicolinate synthase		gene	gene902	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04210
CleRt_RS04215	CleRT_08200		CleRt_RS04215	876809	877402	+	outer membrane protein assembly factor BamC		gene	gene903	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04215
CleRt_RS04220	CleRT_08210		CleRt_RS04220	877414	878025	+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase%3B frameshifted%3B internal stop	pseudogene	gene904	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04220
CleRt_RS04225	CleRT_t025		CleRt_RS04225	878133	878225	+	tRNA-Ser		tRNA	gene905	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04225
CleRt_RS04230	CleRt_RS04230		CleRt_RS04230	878466	878744	-	hypothetical protein		gene	gene906	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04230
CleRt_RS04235	CleRT_08250		CleRt_RS04235	881314	882773	-	FMN-binding glutamate synthase family protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene910	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04235
CleRt_RS04240	CleRT_08260		CleRt_RS04240	882934	883975	+	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	frameshifted%3B internal stop	pseudogene	gene911	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04240
CleRt_RS04245	CleRT_08270		CleRt_RS04245	884031	885287	+	NADP-dependent isocitrate dehydrogenase		gene	gene912	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04245
CleRt_RS04255	CleRT_08290		CleRt_RS04255	887750	887995	-	translation initiation factor IF-1		gene	gene914	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04255
CleRt_RS04260	CleRT_08300		CleRt_RS04260	888417	889376	-	thioredoxin-disulfide reductase		gene	gene915	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04260
CleRt_RS04265	CleRT_08310		CleRt_RS04265	889543	891882	+	DNA translocase FtsK		gene	gene916	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04265
CleRt_RS04270	CleRT_08320		CleRt_RS04270	891952	892674	+	outer membrane lipoprotein carrier protein LolA		gene	gene917	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04270
CleRt_RS04275	CleRT_08330		CleRt_RS04275	892610	893687	+	recombination factor protein RarA	frameshifted%3B internal stop	pseudogene	gene918	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04275
CleRt_RS04280	CleRT_08340		CleRt_RS04280	893779	894153	+	CrcB family protein		gene	gene919	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04280
CleRt_RS04285	CleRT_08350		CleRt_RS04285	894147	895421	+	serine--tRNA ligase		gene	gene920	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04285
CleRt_RS04290	CleRT_t026		CleRt_RS04290	896011	896099	+	tRNA-Ser		tRNA	gene921	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04290
CleRt_RS04295	CleRT_08370		CleRt_RS04295	896114	897982	+	excinuclease ABC subunit UvrC		gene	gene922	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04295
CleRt_RS04300	CleRT_08380		CleRt_RS04300	897979	898539	+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase		gene	gene923	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04300
CleRt_RS04305	CleRT_t027		CleRt_RS04305	898655	898730	+	tRNA-Gly		tRNA	gene924	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04305
CleRt_RS04310	CleRT_08390		CleRt_RS04310	898727	899005	-	hypothetical protein		gene	gene925	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04310
CleRt_RS04315	CleRT_08410		CleRt_RS04315	900107	900439	-	hypothetical protein		gene	gene926	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04315
CleRt_RS04320	CleRt_RS04320		CleRt_RS04320	901105	901461	-	hypothetical protein		gene	gene927	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04320
CleRt_RS04325	CleRt_RS04325		CleRt_RS04325	901612	901839	+	hypothetical protein		gene	gene928	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04325
CleRt_RS04330	CleRt_RS04330		CleRt_RS04330	901890	902093	-	hypothetical protein		gene	gene929	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04330
CleRt_RS04335	CleRT_08430		CleRt_RS04335	902422	902778	+	hypothetical protein		gene	gene930	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04335
CleRt_RS04340	CleRt_RS04340		CleRt_RS04340	902801	903037	+	hypothetical protein		gene	gene931	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04340
CleRt_RS04345	CleRT_08440		CleRt_RS04345	903182	903442	+	DUF4065 domain-containing protein		gene	gene932	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04345
CleRt_RS04350	CleRT_08450		CleRt_RS04350	905099	906430	-	MFS transporter		gene	gene933	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04350
CleRt_RS04355	CleRT_08470		CleRt_RS04355	907134	907799	-	SAM-dependent methyltransferase		gene	gene934	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04355
CleRt_RS04360	CleRT_08480		CleRt_RS04360	908127	908717	-	pyridoxamine 5'-phosphate oxidase		gene	gene935	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04360
CleRt_RS04365	CleRT_08490		CleRt_RS04365	908735	909418	-	DNA-3-methyladenine glycosylase		gene	gene936	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04365
CleRt_RS04370	CleRt_RS04370		CleRt_RS04370	909446	909703	-	hypothetical protein		gene	gene937	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04370
CleRt_RS04375	CleRT_08510		CleRt_RS04375	910590	911369	-	ABC transporter permease		gene	gene938	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04375
CleRt_RS04380	CleRT_08520		CleRt_RS04380	911369	912280	-	ABC transporter ATP-binding protein		gene	gene939	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04380
CleRt_RS04385	CleRT_08530		CleRt_RS04385	912277	912663	-	RNA-binding protein		gene	gene940	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04385
CleRt_RS04390	CleRt_RS04390		CleRt_RS04390	912788	913000	-	hypothetical protein		gene	gene941	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04390
CleRt_RS04395	CleRT_08550		CleRt_RS04395	913412	914866	+	hypothetical protein		gene	gene942	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04395
CleRt_RS04400	CleRT_t028		CleRt_RS04400	915720	915790	+	tRNA-Gly		tRNA	gene944	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04400
CleRt_RS04410	CleRT_08580		CleRt_RS04410	916550	917608	+	adenine DNA glycosylase		gene	gene946	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04410
CleRt_RS04415	CleRT_08590		CleRt_RS04415	917610	917882	+	oxidative damage protection protein		gene	gene947	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04415
CleRt_RS04420	CleRT_08610		CleRt_RS04420	918428	918794	+	rhodanese	frameshifted%3B internal stop	pseudogene	gene949	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04420
CleRt_RS04425	CleRT_t029		CleRt_RS04425	918840	918915	+	tRNA-Phe		tRNA	gene950	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04425
CleRt_RS04430	CleRT_08640		CleRt_RS04430	920895	921567	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene952	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04430
CleRt_RS04435	CleRT_08650		CleRt_RS04435	921796	922062	-	hypothetical protein		gene	gene953	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04435
CleRt_RS04440	CleRt_RS04440		CleRt_RS04440	923472	923666	+	hypothetical protein		gene	gene954	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04440
CleRt_RS04450	CleRT_08690		CleRt_RS04450	925580	926797	+	integrase		gene	gene956	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04450
CleRt_RS04455	CleRt_RS04455		CleRt_RS04455	926786	926986	-	hypothetical protein		gene	gene957	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04455
CleRt_RS04460	CleRt_RS04460		CleRt_RS04460	927160	927339	+	hypothetical protein		gene	gene958	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04460
CleRt_RS04465	CleRt_RS04465		CleRt_RS04465	929690	929956	+	hypothetical protein		gene	gene959	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04465
CleRt_RS04470	CleRT_08710		CleRt_RS04470	930556	930846	-	hypothetical protein		gene	gene960	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04470
CleRt_RS04480	CleRT_08740		CleRt_RS04480	932707	933444	-	tRNA 2-thiocytidine(32) synthetase TtcA	frameshifted%3B internal stop	pseudogene	gene962	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04480
CleRt_RS04485	CleRT_08750		CleRt_RS04485	933633	934049	-	hypothetical protein	frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene963	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04485
CleRt_RS04495	CleRt_RS04495		CleRt_RS04495	935294	935500	+	hypothetical protein		gene	gene966	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04495
CleRt_RS04500	CleRT_08780		CleRt_RS04500	935844	936404	-	hypoxanthine-guanine phosphoribosyltransferase		gene	gene967	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04500
CleRt_RS04505	CleRT_08790		CleRt_RS04505	936391	937548	-	mechanosensitive ion channel family protein		gene	gene968	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04505
CleRt_RS04510	CleRT_08800		CleRt_RS04510	937734	938654	-	beta-N-acetylhexosaminidase	frameshifted%3B internal stop	pseudogene	gene969	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04510
CleRt_RS04515	CleRT_08810		CleRt_RS04515	938660	938998	-	DUF1820 domain-containing protein		gene	gene970	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04515
CleRt_RS04525	CleRT_08830		CleRt_RS04525	939570	940071	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene972	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04525
CleRt_RS04530	CleRt_RS04530		CleRt_RS04530	940143	940361	-	hypothetical protein		gene	gene973	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04530
CleRt_RS04535	CleRT_08840		CleRt_RS04535	940368	941294	-	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA		gene	gene974	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04535
CleRt_RS04540	CleRT_08850	mutL	mutL	941296	943044	-	DNA mismatch repair protein MutL	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex	gene	gene975	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04540
CleRt_RS04545	CleRt_RS04545		CleRt_RS04545	943060	943383	+	hypothetical protein		gene	gene976	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04545
CleRt_RS04550	CleRT_08870		CleRt_RS04550	944686	945939	-	N-acetylmuramoyl-L-alanine amidase		gene	gene977	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04550
CleRt_RS04555	CleRT_08880		CleRt_RS04555	946060	946440	-	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE		gene	gene978	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04555
CleRt_RS04560	CleRT_08890		CleRt_RS04560	946501	947970	-	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase		gene	gene979	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04560
CleRt_RS04565	CleRT_08900		CleRt_RS04565	948004	950166	-	ribonuclease R		gene	gene980	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04565
CleRt_RS04570	CleRt_RS04570		CleRt_RS04570	950707	950973	-	hypothetical protein		gene	gene982	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04570
CleRt_RS04580	CleRT_t030		CleRt_RS04580	953038	953115	+	tRNA-Arg		tRNA	gene984	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04580
CleRt_RS04585	CleRT_08940		CleRt_RS04585	953146	954531	+	class II fumarate hydratase		gene	gene985	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04585
CleRt_RS04590	CleRT_08950		CleRt_RS04590	954538	955317	-	signal peptidase I		gene	gene986	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04590
CleRt_RS04595	CleRT_08960		CleRt_RS04595	955333	955752	-	hypothetical protein		gene	gene987	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04595
CleRt_RS04605	CleRt_RS04605		CleRt_RS04605	957041	957220	-	hypothetical protein		gene	gene988	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04605
CleRt_RS04610	CleRT_08980		CleRt_RS04610	957698	958012	-	hypothetical protein		gene	gene989	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04610
CleRt_RS04615	CleRT_08990		CleRt_RS04615	958523	959124	+	queuosine biosynthesis protein	frameshifted%3B internal stop	pseudogene	gene990	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04615
CleRt_RS04620	CleRT_09010		CleRt_RS04620	959903	960145	+	hypothetical protein		gene	gene992	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04620
CleRt_RS04625	CleRT_09020		CleRt_RS04625	960142	961254	-	alanine dehydrogenase		gene	gene993	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04625
CleRt_RS04630	CleRT_09030		CleRt_RS04630	961269	962221	-	electron transfer flavoprotein subunit alpha	frameshifted	pseudogene	gene994	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04630
CleRt_RS04635	CleRT_09040		CleRt_RS04635	962260	962990	-	electron transfer flavoprotein subunit beta	frameshifted%3B internal stop	pseudogene	gene995	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04635
CleRt_RS04640	CleRT_09050		CleRt_RS04640	962987	963706	-	carboxymethylenebutenolidase	frameshifted%3B internal stop	pseudogene	gene996	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04640
CleRt_RS04645	CleRT_09060		CleRt_RS04645	963857	965488	+	electron transfer flavoprotein-ubiquinone oxidoreductase	frameshifted%3B internal stop	pseudogene	gene997	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04645
CleRt_RS04650	CleRT_09070		CleRt_RS04650	965611	966561	+	cytochrome c biogenesis protein		gene	gene998	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04650
CleRt_RS04655	CleRT_09080		CleRt_RS04655	966558	966872	+	chaperone modulatory protein CbpM		gene	gene999	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04655
CleRt_RS04660	CleRT_09100		CleRt_RS04660	967885	968353	-	HPP family protein	frameshifted%3B internal stop	pseudogene	gene1000	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04660
CleRt_RS04665	CleRT_09110		CleRt_RS04665	968417	968782	-	hypothetical protein		gene	gene1001	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04665
CleRt_RS04670	CleRT_09120		CleRt_RS04670	968791	969981	-	IscS subfamily cysteine desulfurase		gene	gene1002	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04670
CleRt_RS04675	CleRT_09130		CleRt_RS04675	969981	972011	-	oligopeptide transporter%2C OPT family		gene	gene1003	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04675
CleRt_RS04680	CleRT_09140		CleRt_RS04680	972060	972776	-	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	frameshifted%3B internal stop	pseudogene	gene1004	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04680
CleRt_RS04685	CleRT_09150		CleRt_RS04685	972944	973765	+	inositol monophosphatase		gene	gene1005	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04685
CleRt_RS04690	CleRT_09160		CleRt_RS04690	973746	976791	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1006	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04690
CleRt_RS04700	CleRT_09180		CleRt_RS04700	977349	978101	-	L%2CD-transpeptidase	frameshifted%3B internal stop	pseudogene	gene1008	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04700
CleRt_RS04705	CleRT_09190		CleRt_RS04705	978321	979235	-	protein translocase subunit SecF		gene	gene1009	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04705
CleRt_RS04710	CleRT_09200		CleRt_RS04710	979235	981106	-	protein translocase subunit SecD		gene	gene1010	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04710
CleRt_RS04715	CleRT_09210		CleRt_RS04715	981130	981483	-	preprotein translocase subunit YajC		gene	gene1011	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04715
CleRt_RS04720	CleRT_09220		CleRt_RS04720	981639	982748	+	tRNA 2-thiouridine(34) synthase MnmA		gene	gene1012	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04720
CleRt_RS04730	CleRt_RS04730		CleRt_RS04730	986452	987545	+	tryptophan synthase subunit beta	frameshifted%3B internal stop	pseudogene	gene1018	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04730
CleRt_RS04735	CleRT_09270		CleRt_RS04735	987532	988258	+	tryptophan synthase subunit alpha	frameshifted%3B internal stop	pseudogene	gene1019	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04735
CleRt_RS04740	CleRT_09280		CleRt_RS04740	988325	988965	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1020	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04740
CleRt_RS04750	CleRT_09320		CleRt_RS04750	995523	996434	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1024	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04750
CleRt_RS04755	CleRT_t031		CleRt_RS04755	996784	996860	-	tRNA-Arg		tRNA	gene1025	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04755
CleRt_RS04760	CleRT_09330		CleRt_RS04760	997052	997510	+	Hsp20/alpha crystallin family protein		gene	gene1026	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04760
CleRt_RS04765	CleRT_09340		CleRt_RS04765	997798	998235	-	secondary thiamine-phosphate synthase	frameshifted%3B internal stop	pseudogene	gene1027	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04765
CleRt_RS04770	CleRT_09350		CleRt_RS04770	998232	999575	-	RNA-splicing ligase RtcB	frameshifted%3B internal stop	pseudogene	gene1028	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04770
CleRt_RS04775	CleRT_09360		CleRt_RS04775	999612	1000027	-	archease	frameshifted%3B internal stop	pseudogene	gene1029	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04775
CleRt_RS04780	CleRt_RS04780		CleRt_RS04780	1000212	1000634	-	hypothetical protein		gene	gene1030	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04780
CleRt_RS04785	CleRt_RS04785		CleRt_RS04785	1000923	1001144	+	hypothetical protein		gene	gene1031	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04785
CleRt_RS04790	CleRt_RS04790		CleRt_RS04790	1002759	1003019	+	hypothetical protein		gene	gene1032	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04790
CleRt_RS04795	CleRT_09380		CleRt_RS04795	1004648	1004965	+	hypothetical protein		gene	gene1033	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04795
CleRt_RS04800	CleRT_09390		CleRt_RS04800	1005065	1005340	+	hypothetical protein		gene	gene1034	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04800
CleRt_RS04805	CleRt_RS04805		CleRt_RS04805	1006423	1006659	+	hypothetical protein		gene	gene1035	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04805
CleRt_RS04810	CleRT_09400		CleRt_RS04810	1007950	1009125	+	Bcr/CflA family drug resistance efflux transporter	frameshifted%3B internal stop	pseudogene	gene1036	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04810
CleRt_RS04820	CleRT_09420		CleRt_RS04820	1010361	1011510	-	class V aminotransferase	frameshifted%3B internal stop	pseudogene	gene1039	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04820
CleRt_RS04825	CleRT_09430		CleRt_RS04825	1011732	1012049	+	RNA-binding protein		gene	gene1040	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04825
CleRt_RS04830	CleRt_RS04830		CleRt_RS04830	1013080	1013298	-	hypothetical protein		gene	gene1041	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04830
CleRt_RS04835	CleRt_RS04835		CleRt_RS04835	1013734	1013943	-	hypothetical protein		gene	gene1042	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04835
CleRt_RS04840	CleRt_RS04840		CleRt_RS04840	1014003	1014182	-	hypothetical protein		gene	gene1043	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04840
CleRt_RS04855	CleRT_09470		CleRt_RS04855	1016211	1017647	+	nicotinate phosphoribosyltransferase		gene	gene1045	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04855
CleRt_RS04860	CleRT_09480		CleRt_RS04860	1017613	1018142	+	nicotinamidase	frameshifted%3B internal stop	pseudogene	gene1046	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04860
CleRt_RS04870	CleRT_t032		CleRt_RS04870	1020529	1020605	-	tRNA-Arg		tRNA	gene1048	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04870
CleRt_RS04880	CleRT_09540		CleRt_RS04880	1024484	1024789	+	hypothetical protein		gene	gene1050	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04880
CleRt_RS04885	CleRt_RS04885		CleRt_RS04885	1025476	1025715	+	hypothetical protein		gene	gene1051	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04885
CleRt_RS04890	CleRt_RS04890		CleRt_RS04890	1026429	1026659	+	hypothetical protein		gene	gene1052	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04890
CleRt_RS04895	CleRT_09560		CleRt_RS04895	1027474	1027809	-	cytochrome o ubiquinol oxidase subunit IV		gene	gene1053	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04895
CleRt_RS04900	CleRT_09570		CleRt_RS04900	1027802	1028413	-	cytochrome o ubiquinol oxidase subunit III		gene	gene1054	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04900
CleRt_RS04905	CleRT_09580		CleRt_RS04905	1028410	1030416	-	cytochrome o ubiquinol oxidase subunit I		gene	gene1055	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04905
CleRt_RS04910	CleRT_09590		CleRt_RS04910	1030438	1031340	-	cytochrome ubiquinol oxidase subunit II		gene	gene1056	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04910
CleRt_RS04915	CleRt_RS04915		CleRt_RS04915	1036268	1036495	-	hypothetical protein		gene	gene1058	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04915
CleRt_RS04920	CleRT_09640		CleRt_RS04920	1037235	1037532	-	nucleotidyltransferase	frameshifted	pseudogene	gene1059	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04920
CleRt_RS04925	CleRT_t033		CleRt_RS04925	1037952	1038039	-	tRNA-Leu		tRNA	gene1061	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04925
CleRt_RS04930	CleRT_t034		CleRt_RS04930	1038079	1038149	-	tRNA-Cys		tRNA	gene1062	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04930
CleRt_RS04935	CleRt_RS04935		CleRt_RS04935	1038201	1038422	-	hypothetical protein		gene	gene1063	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04935
CleRt_RS04940	CleRt_RS04940		CleRt_RS04940	1041858	1042094	-	hypothetical protein		gene	gene1064	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04940
CleRt_RS04945	CleRt_RS04945		CleRt_RS04945	1042225	1042407	-	hypothetical protein		gene	gene1065	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04945
CleRt_RS04950	CleRt_RS04950		CleRt_RS04950	1043117	1043338	-	hypothetical protein		gene	gene1066	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04950
CleRt_RS04955	CleRT_09680		CleRt_RS04955	1043920	1044195	-	hypothetical protein		gene	gene1067	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04955
CleRt_RS04960	CleRT_09690		CleRt_RS04960	1045476	1046492	-	quinone-dependent dihydroorotate dehydrogenase		gene	gene1068	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04960
CleRt_RS04965	CleRT_09700		CleRt_RS04965	1046489	1047209	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1069	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04965
CleRt_RS04970	CleRT_09710		CleRt_RS04970	1047357	1048520	+	isovaleryl-CoA dehydrogenase	catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA	gene	gene1070	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04970
CleRt_RS04975	CleRT_09720		CleRt_RS04975	1048520	1049736	+	acetyl-CoA acetyltransferase	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B frameshifted	pseudogene	gene1071	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04975
CleRt_RS04980	CleRT_09730		CleRt_RS04980	1049818	1051425	+	methylcrotonoyl-CoA carboxylase		gene	gene1072	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04980
CleRt_RS04985	CleRT_09740		CleRt_RS04985	1051442	1052209	+	enoyl-CoA hydratase	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA	gene	gene1073	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04985
CleRt_RS04990	CleRT_09750		CleRt_RS04990	1052237	1054214	+	biotin carboxylase	frameshifted%3B internal stop	pseudogene	gene1074	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04990
CleRt_RS04995	CleRT_09780		CleRt_RS04995	1055215	1056294	+	3-deoxy-7-phosphoheptulonate synthase		gene	gene1075	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS04995
CleRt_RS05000	CleRt_RS05000		CleRt_RS05000	1056328	1056540	+	hypothetical protein		gene	gene1076	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05000
CleRt_RS05005	CleRT_09790		CleRt_RS05005	1056587	1057163	+	prephenate dehydratase	frameshifted%3B internal stop	pseudogene	gene1077	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05005
CleRt_RS05015	CleRT_09820		CleRt_RS05015	1058683	1059438	-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB		gene	gene1079	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05015
CleRt_RS05020	CleRT_09830		CleRt_RS05020	1059538	1060368	+	septal ring lytic transglycosylase RlpA family protein		gene	gene1080	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05020
CleRt_RS05025	CleRT_09840		CleRt_RS05025	1060372	1061079	+	uracil-DNA glycosylase		gene	gene1081	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05025
CleRt_RS05030	CleRT_t035		CleRt_RS05030	1061176	1061259	+	tRNA-Leu		tRNA	gene1082	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05030
CleRt_RS05035	CleRT_09850		CleRt_RS05035	1061280	1061810	+	peptide deformylase		gene	gene1083	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05035
CleRt_RS05040	CleRT_09860		CleRt_RS05040	1061810	1062721	+	protoheme IX farnesyltransferase		gene	gene1084	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05040
CleRt_RS05045	CleRT_09870		CleRt_RS05045	1062773	1064107	-	adenylosuccinate synthase		gene	gene1085	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05045
CleRt_RS05050	CleRT_09880		CleRt_RS05050	1064284	1064976	-	lipoprotein ABC transporter ATP-binding protein		gene	gene1086	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05050
CleRt_RS05055	CleRT_09890		CleRt_RS05055	1064969	1066213	-	lipoprotein-releasing system transmembrane subunit LolC		gene	gene1087	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05055
CleRt_RS05060	CleRT_09900		CleRt_RS05060	1066289	1067262	+	biotin--[acetyl-CoA-carboxylase] ligase	frameshifted	pseudogene	gene1088	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05060
CleRt_RS05065	CleRT_09910		CleRt_RS05065	1067319	1068014	-	dethiobiotin synthase		gene	gene1089	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05065
CleRt_RS05070	CleRT_09920		CleRt_RS05070	1068023	1068763	-	hypothetical protein		gene	gene1090	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05070
CleRt_RS05075	CleRT_09930		CleRt_RS05075	1068756	1069463	-	carboxylesterase		gene	gene1091	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05075
CleRt_RS05080	CleRT_09940		CleRt_RS05080	1069457	1070614	-	8-amino-7-oxononanoate synthase		gene	gene1092	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05080
CleRt_RS05085	CleRT_09950		CleRt_RS05085	1070621	1071574	-	biotin synthase BioB		gene	gene1093	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05085
CleRt_RS05090	CleRT_09960		CleRt_RS05090	1071662	1073002	+	adenosylmethionine--8-amino-7-oxononanoate transaminase		gene	gene1094	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05090
CleRt_RS05095	CleRT_09970	sirA	sirA	1073097	1073676	-	two-component system response regulator UvrY	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system%3B frameshifted%3B internal stop	pseudogene	gene1095	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05095
CleRt_RS05100	CleRt_RS05100		CleRt_RS05100	1076715	1076909	-	hypothetical protein		gene	gene1097	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05100
CleRt_RS05105	CleRt_RS05105		CleRt_RS05105	1077453	1077635	-	hypothetical protein		gene	gene1098	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05105
CleRt_RS05110	CleRt_RS05110		CleRt_RS05110	1078437	1078682	-	hypothetical protein		gene	gene1099	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05110
CleRt_RS05115	CleRt_RS05115		CleRt_RS05115	1078809	1079132	-	hypothetical protein		gene	gene1100	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05115
CleRt_RS05120	CleRT_10000	sirA	sirA	1079693	1080381	-	two-component system response regulator UvrY	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system%3B frameshifted%3B internal stop	pseudogene	gene1101	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05120
CleRt_RS05125	CleRT_10010		CleRt_RS05125	1080903	1081166	+	hypothetical protein		gene	gene1102	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05125
CleRt_RS05130	CleRT_10020		CleRt_RS05130	1081541	1081927	+	hypothetical protein		gene	gene1103	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05130
CleRt_RS05135	CleRt_RS05135		CleRt_RS05135	1081920	1082126	-	hypothetical protein		gene	gene1104	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05135
CleRt_RS05140	CleRt_RS05140		CleRt_RS05140	1087781	1088026	+	hypothetical protein		gene	gene1105	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05140
CleRt_RS05145	CleRT_t036		CleRt_RS05145	1088990	1089082	-	tRNA-Ser		tRNA	gene1106	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05145
CleRt_RS05150	CleRT_10040		CleRt_RS05150	1089338	1089556	-	carbon storage regulator		gene	gene1107	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05150
CleRt_RS05155	CleRT_10050		CleRt_RS05155	1089698	1090927	-	aspartate kinase		gene	gene1108	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05155
CleRt_RS05160	CleRT_10060		CleRt_RS05160	1090974	1093592	-	alanine--tRNA ligase		gene	gene1109	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05160
CleRt_RS05165	CleRT_10070		CleRt_RS05165	1093589	1094038	-	regulatory protein RecX		gene	gene1110	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05165
CleRt_RS05170	CleRT_10080		CleRt_RS05170	1094035	1095069	-	recombinase RecA		gene	gene1111	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05170
CleRt_RS05175	CleRT_10090		CleRt_RS05175	1095184	1095672	-	CinA family protein		gene	gene1112	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05175
CleRt_RS05180	CleRT_10100		CleRt_RS05180	1095766	1098342	+	DNA mismatch repair protein MutS		gene	gene1113	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05180
CleRt_RS05185	CleRT_10110		CleRt_RS05185	1098339	1099096	+	glycosyl transferase	frameshifted%3B internal stop	pseudogene	gene1114	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05185
CleRt_RS05190	CleRt_RS05190		CleRt_RS05190	1099243	1099752	+	MFS transporter		gene	gene1115	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05190
CleRt_RS05195	CleRt_RS05195		CleRt_RS05195	1099715	1100071	+	hypothetical protein		gene	gene1116	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05195
CleRt_RS05200	CleRt_RS05200		CleRt_RS05200	1100185	1100694	+	hypothetical protein		gene	gene1117	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05200
CleRt_RS05205	CleRT_10130		CleRt_RS05205	1100733	1101992	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1118	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05205
CleRt_RS05210	CleRT_10140		CleRt_RS05210	1101963	1102697	-	23S rRNA pseudouridylate synthase B		gene	gene1119	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05210
CleRt_RS05215	CleRT_10150		CleRt_RS05215	1102703	1103350	-	SMC-Scp complex subunit ScpB		gene	gene1120	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05215
CleRt_RS05220	CleRT_10160		CleRt_RS05220	1103356	1104153	-	segregation/condensation protein A		gene	gene1121	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05220
CleRt_RS05225	CleRT_10180		CleRt_RS05225	1105130	1105741	-	threonylcarbamoyl-AMP synthase		gene	gene1122	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05225
CleRt_RS05230	CleRT_10190		CleRt_RS05230	1105796	1106340	+	septation protein A	frameshifted	pseudogene	gene1123	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05230
CleRt_RS05235	CleRt_RS05235		CleRt_RS05235	1106343	1106642	+	BolA family transcriptional regulator		gene	gene1124	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05235
CleRt_RS05240	CleRt_RS05240		CleRt_RS05240	1106654	1106923	+	BolA family transcriptional regulator		gene	gene1125	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05240
CleRt_RS05245	CleRT_10210		CleRt_RS05245	1106905	1108250	-	MFS transporter	frameshifted%3B internal stop	pseudogene	gene1126	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05245
CleRt_RS05250	CleRT_10220		CleRt_RS05250	1108395	1108628	+	50S ribosomal protein L31		gene	gene1127	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05250
CleRt_RS05255	CleRT_10230		CleRt_RS05255	1108700	1109505	-	hypothetical protein	frameshifted	pseudogene	gene1128	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05255
CleRt_RS05260	CleRT_10240		CleRt_RS05260	1109584	1110035	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1129	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05260
CleRt_RS05265	CleRT_10250		CleRt_RS05265	1110047	1110379	-	hypothetical protein		gene	gene1130	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05265
CleRt_RS05270	CleRT_10260		CleRt_RS05270	1110390	1111875	-	amidophosphoribosyltransferase	frameshifted%3B internal stop	pseudogene	gene1131	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05270
CleRt_RS05275	CleRT_10270		CleRt_RS05275	1111882	1112430	-	colicin V synthesis protein	incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1132	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05275
CleRt_RS05280	CleRT_10280		CleRt_RS05280	1112461	1112988	-	hypothetical protein		gene	gene1133	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05280
CleRt_RS05285	CleRT_10290		CleRt_RS05285	1113170	1114408	-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase		gene	gene1134	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05285
CleRt_RS05290	CleRT_10300		CleRt_RS05290	1114519	1115394	-	acetyl-CoA carboxylase carboxyltransferase subunit beta		gene	gene1135	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05290
CleRt_RS05295	CleRT_10310		CleRt_RS05295	1115411	1116199	-	tRNA pseudouridine(38-40) synthase TruA		gene	gene1136	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05295
CleRt_RS05300	CleRT_10320		CleRt_RS05300	1116204	1117151	-	hypothetical protein		gene	gene1137	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05300
CleRt_RS05305	CleRT_10340		CleRt_RS05305	1117624	1118210	+	dihydromonapterin reductase	frameshifted%3B internal stop	pseudogene	gene1138	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05305
CleRt_RS05310	CleRT_10360		CleRt_RS05310	1118617	1119819	-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC		gene	gene1139	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05310
CleRt_RS05315	CleRt_RS05315		CleRt_RS05315	1120060	1120254	-	hypothetical protein		gene	gene1140	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05315
CleRt_RS05320	CleRt_RS05320		CleRt_RS05320	1120974	1121207	-	hypothetical protein		gene	gene1141	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05320
CleRt_RS05325	CleRT_10370		CleRt_RS05325	1121414	1123244	-	GTP-binding protein TypA	frameshifted%3B internal stop	pseudogene	gene1142	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05325
CleRt_RS05330	CleRT_10380		CleRt_RS05330	1123347	1124393	-	aspartate-semialdehyde dehydrogenase		gene	gene1143	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05330
CleRt_RS05335	CleRT_10390		CleRt_RS05335	1124413	1125471	-	chorismate synthase		gene	gene1144	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05335
CleRt_RS05340	CleRT_10400		CleRt_RS05340	1125615	1126139	+	DNA mismatch repair protein MutS		gene	gene1145	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05340
CleRt_RS05345	CleRT_10410		CleRt_RS05345	1126150	1126719	+	uridine kinase	frameshifted%3B internal stop	pseudogene	gene1146	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05345
CleRt_RS05350	CleRT_10420		CleRt_RS05350	1126911	1127399	+	deacylase	frameshifted	pseudogene	gene1147	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05350
CleRt_RS05355	CleRT_10430		CleRt_RS05355	1127376	1127615	-	succinate dehydrogenase assembly factor 2		gene	gene1148	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05355
CleRt_RS05360	CleRT_10440		CleRt_RS05360	1127617	1128690	-	alanine racemase		gene	gene1149	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05360
CleRt_RS05365	CleRT_10450		CleRt_RS05365	1128687	1130075	-	replicative DNA helicase		gene	gene1150	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05365
CleRt_RS05370	CleRT_10460		CleRt_RS05370	1130713	1131159	-	50S ribosomal protein L9		gene	gene1151	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05370
CleRt_RS05375	CleRT_10470		CleRt_RS05375	1131180	1132079	-	membrane protein		gene	gene1152	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05375
CleRt_RS05380	CleRT_10480		CleRt_RS05380	1132144	1132365	-	30S ribosomal protein S18		gene	gene1153	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05380
CleRt_RS05385	CleRT_10490		CleRt_RS05385	1132376	1132768	-	30S ribosomal protein S6		gene	gene1154	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05385
CleRt_RS05390	CleRt_RS05390		CleRt_RS05390	1132822	1133013	+	hypothetical protein		gene	gene1155	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05390
CleRt_RS05395	CleRT_10500		CleRt_RS05395	1133000	1133380	+	membrane protein		gene	gene1156	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05395
CleRt_RS05400	CleRT_10510		CleRt_RS05400	1133377	1135008	+	NAD+ synthase	NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers	gene	gene1157	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05400
CleRt_RS05405	CleRT_10520		CleRt_RS05405	1134980	1135957	-	tetraacyldisaccharide 4'-kinase		gene	gene1158	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05405
CleRt_RS05410	CleRT_10530		CleRt_RS05410	1135957	1137726	-	lipid A export permease/ATP-binding protein MsbA		gene	gene1159	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05410
CleRt_RS05415	CleRt_RS05415		CleRt_RS05415	1139364	1139711	-	DUF4131 domain-containing protein		gene	gene1161	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05415
CleRt_RS05420	CleRT_10550		CleRt_RS05420	1141089	1141358	-	hypothetical protein		gene	gene1163	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05420
CleRt_RS05425	CleRT_10570		CleRt_RS05425	1141938	1144055	-	polyribonucleotide nucleotidyltransferase		gene	gene1165	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05425
CleRt_RS05430	CleRT_10580		CleRt_RS05430	1144069	1144338	-	30S ribosomal protein S15		gene	gene1166	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05430
CleRt_RS05435	CleRT_10600		CleRt_RS05435	1145486	1146367	-	UTP--glucose-1-phosphate uridylyltransferase		gene	gene1167	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05435
CleRt_RS05440	CleRT_10610		CleRt_RS05440	1146364	1148022	-	glucose-6-phosphate isomerase		gene	gene1168	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05440
CleRt_RS05445	CleRt_RS05445		CleRt_RS05445	1148438	1148932	-	hypothetical protein		gene	gene1169	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05445
CleRt_RS05450	CleRT_10630		CleRt_RS05450	1148953	1149699	-	3-hydroxyacyl-CoA dehydrogenase	frameshifted%3B internal stop	pseudogene	gene1170	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05450
CleRt_RS05455	CleRT_10640		CleRt_RS05455	1149727	1151082	-	UDP-glucose/GDP-mannose dehydrogenase family protein		gene	gene1171	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05455
CleRt_RS05460	CleRT_10650		CleRt_RS05460	1151142	1152431	+	nucleotide sugar dehydrogenase		gene	gene1172	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05460
CleRt_RS05465	CleRT_10660		CleRt_RS05465	1152432	1153439	+	NAD-dependent epimerase		gene	gene1173	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05465
CleRt_RS05470	CleRT_10670		CleRt_RS05470	1153396	1154547	-	glycosyltransferase family 1 protein		gene	gene1174	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05470
CleRt_RS05475	CleRT_10680		CleRt_RS05475	1154544	1156454	-	asparagine synthase (glutamine-hydrolyzing)		gene	gene1175	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05475
CleRt_RS05480	CleRT_10690		CleRt_RS05480	1156456	1157664	-	glycosyl transferase		gene	gene1176	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05480
CleRt_RS05485	CleRT_10700		CleRt_RS05485	1157805	1158920	-	glycosyltransferase family 4 protein		gene	gene1177	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05485
CleRt_RS05490	CleRT_10720		CleRt_RS05490	1160628	1161818	-	glycosyltransferase family 1 protein		gene	gene1179	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05490
CleRt_RS05495	CleRT_10730		CleRt_RS05495	1161825	1162895	-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)		gene	gene1180	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05495
CleRt_RS05500	CleRT_10740		CleRt_RS05500	1162914	1164004	-	nucleotide sugar epimerase	frameshifted	pseudogene	gene1181	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05500
CleRt_RS05505	CleRT_10750		CleRt_RS05505	1164007	1164951	-	nucleotide sugar epimerase		gene	gene1182	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05505
CleRt_RS05510	CleRT_10760		CleRt_RS05510	1164981	1166927	-	asparagine synthase (glutamine-hydrolyzing)		gene	gene1183	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05510
CleRt_RS05515	CleRT_10770		CleRt_RS05515	1166928	1168535	-	oxidoreductase		gene	gene1184	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05515
CleRt_RS05520	CleRT_10780		CleRt_RS05520	1168697	1169794	-	DegT/DnrJ/EryC1/StrS family aminotransferase		gene	gene1185	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05520
CleRt_RS05525	CleRt_RS05525		CleRt_RS05525	1169781	1169972	-	hypothetical protein		gene	gene1186	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05525
CleRt_RS05530	CleRT_10790		CleRt_RS05530	1170038	1171423	+	adenylosuccinate lyase		gene	gene1187	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05530
CleRt_RS05535	CleRT_10800		CleRt_RS05535	1171447	1173200	+	NAD-dependent malic enzyme	malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate%3B frameshifted%3B internal stop	pseudogene	gene1188	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05535
CleRt_RS05540	CleRT_10830		CleRt_RS05540	1177430	1178576	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1189	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05540
CleRt_RS05545	CleRT_10840		CleRt_RS05545	1178647	1180224	-	peptide chain release factor 3		gene	gene1190	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05545
CleRt_RS05550	CleRT_10850		CleRt_RS05550	1180261	1181325	-	LPS export ABC transporter permease LptG		gene	gene1191	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05550
CleRt_RS05555	CleRT_10860		CleRt_RS05555	1181313	1182437	-	LPS export ABC transporter permease LptF		gene	gene1192	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05555
CleRt_RS05560	CleRT_10870		CleRt_RS05560	1182512	1185277	+	valine--tRNA ligase		gene	gene1193	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05560
CleRt_RS05565	CleRT_10880		CleRt_RS05565	1185305	1186444	-	serine hydrolase		gene	gene1194	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05565
CleRt_RS05570	CleRT_10890		CleRt_RS05570	1186517	1189582	-	AcrB/AcrD/AcrF family protein		gene	gene1195	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05570
CleRt_RS05575	CleRT_10900		CleRt_RS05575	1189617	1190675	-	efflux RND transporter periplasmic adaptor subunit		gene	gene1196	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05575
CleRt_RS05580	CleRt_RS05580		CleRt_RS05580	1190910	1191158	+	hypothetical protein		gene	gene1197	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05580
CleRt_RS05585	CleRt_RS05585		CleRt_RS05585	1191421	1191750	+	hypothetical protein		gene	gene1198	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05585
CleRt_RS05590	CleRt_RS05590		CleRt_RS05590	1192300	1192821	-	cytochrome P450		gene	gene1199	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05590
CleRt_RS05595	CleRt_RS05595		CleRt_RS05595	1193931	1194371	-	hypothetical protein		gene	gene1200	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05595
CleRt_RS05600	CleRt_RS05600		CleRt_RS05600	1194862	1195095	-	hypothetical protein		gene	gene1201	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05600
CleRt_RS05605	CleRT_10960		CleRt_RS05605	1195693	1196076	-	hypothetical protein		gene	gene1202	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05605
CleRt_RS05610	CleRT_10970		CleRt_RS05610	1196266	1197261	+	HlyD family secretion protein		gene	gene1203	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05610
CleRt_RS05615	CleRT_10980		CleRt_RS05615	1197283	1198821	+	MFS transporter		gene	gene1204	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05615
CleRt_RS05620	CleRT_10990		CleRt_RS05620	1198835	1199173	+	histidine triad nucleotide-binding protein		gene	gene1205	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05620
CleRt_RS05625	CleRT_11000		CleRt_RS05625	1199239	1199796	+	GTP cyclohydrolase I FolE		gene	gene1206	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05625
CleRt_RS05630	CleRT_t037		CleRt_RS05630	1199822	1199905	+	tRNA-Leu		tRNA	gene1207	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05630
CleRt_RS05635	CleRt_RS05635		CleRt_RS05635	1200244	1200513	+	hypothetical protein		gene	gene1208	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05635
CleRt_RS05645	CleRt_RS05645		CleRt_RS05645	1203374	1203559	+	hypothetical protein		gene	gene1211	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05645
CleRt_RS05650	CleRt_RS05650		CleRt_RS05650	1204064	1204349	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1212	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05650
CleRt_RS05655	CleRt_RS05655		CleRt_RS05655	1204365	1204655	-	hypothetical protein	incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1213	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05655
CleRt_RS05665	CleRT_11050		CleRt_RS05665	1205663	1206046	-	hypothetical protein		gene	gene1216	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05665
CleRt_RS05670	CleRT_11060		CleRt_RS05670	1206913	1208326	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1217	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05670
CleRt_RS05675	CleRT_11070	sirA	sirA	1208395	1209046	-	two-component system response regulator UvrY	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system%3B frameshifted%3B internal stop	pseudogene	gene1218	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05675
CleRt_RS05680	CleRT_11080		CleRt_RS05680	1209229	1209679	+	inosine-5-monophosphate dehydrogenase	frameshifted	pseudogene	gene1219	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05680
CleRt_RS05685	CleRT_11090		CleRt_RS05685	1209875	1210659	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1220	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05685
CleRt_RS05690	CleRT_11100		CleRt_RS05690	1210648	1211748	-	FUSC family protein		gene	gene1221	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05690
CleRt_RS05695	CleRT_11110		CleRt_RS05695	1211781	1212653	-	EamA/RhaT family transporter		gene	gene1222	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05695
CleRt_RS05700	CleRT_11120		CleRt_RS05700	1212734	1216147	-	DNA polymerase III subunit alpha		gene	gene1223	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05700
CleRt_RS05705	CleRT_11130		CleRt_RS05705	1216235	1217347	-	D-alanine--D-alanine ligase A		gene	gene1224	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05705
CleRt_RS05710	CleRT_11150		CleRt_RS05710	1218507	1218860	-	hypothetical protein		gene	gene1225	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05710
CleRt_RS05715	CleRt_RS05715		CleRt_RS05715	1219640	1219918	-	hypothetical protein		gene	gene1226	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05715
CleRt_RS05720	CleRT_11170		CleRt_RS05720	1221274	1221886	-	ribonuclease HII	frameshifted	pseudogene	gene1227	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05720
CleRt_RS05725	CleRT_11180		CleRt_RS05725	1222237	1223811	-	glutamine-hydrolyzing GMP synthase		gene	gene1228	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05725
CleRt_RS05730	CleRT_11190		CleRt_RS05730	1223876	1225345	-	IMP dehydrogenase		gene	gene1229	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05730
CleRt_RS05735	CleRt_RS05735		CleRt_RS05735	1225348	1225617	-	hypothetical protein		gene	gene1230	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05735
CleRt_RS05740	CleRT_11200		CleRt_RS05740	1225610	1226212	-	hypothetical protein		gene	gene1231	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05740
CleRt_RS05745	CleRT_11210		CleRt_RS05745	1226386	1226667	-	hypothetical protein		gene	gene1232	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05745
CleRt_RS05750	CleRt_RS05750		CleRt_RS05750	1226645	1226917	-	hypothetical protein		gene	gene1233	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05750
CleRt_RS05755	CleRt_RS05755		CleRt_RS05755	1227707	1227943	-	hypothetical protein		gene	gene1234	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05755
CleRt_RS05760	CleRt_RS05760		CleRt_RS05760	1228314	1228571	-	hypothetical protein		gene	gene1235	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05760
CleRt_RS05780	CleRT_11260		CleRt_RS05780	1232535	1233233	-	L%2CD-transpeptidase	frameshifted%3B internal stop	pseudogene	gene1239	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05780
CleRt_RS05785	CleRT_11270		CleRt_RS05785	1233310	1234762	-	transporter	frameshifted%3B internal stop	pseudogene	gene1240	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05785
CleRt_RS05790	CleRT_11280		CleRt_RS05790	1234799	1236175	-	phosphoglucosamine mutase		gene	gene1241	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05790
CleRt_RS05795	CleRT_11290		CleRt_RS05795	1236200	1237069	-	dihydropteroate synthase		gene	gene1242	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05795
CleRt_RS05800	CleRT_11300	hflB	hflB	1237130	1239073	-	ATP-dependent zinc metalloprotease FtsH	inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins	gene	gene1243	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05800
CleRt_RS05805	CleRT_11310		CleRt_RS05805	1239093	1239731	-	RlmE family RNA methyltransferase		gene	gene1244	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05805
CleRt_RS05810	CleRT_11320		CleRt_RS05810	1239776	1240333	-	putative Fe-S cluster assembly protein SufT		gene	gene1245	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05810
CleRt_RS05815	CleRt_RS05815		CleRt_RS05815	1240320	1240691	-	Fe-S cluster assembly scaffold SufA		gene	gene1246	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05815
CleRt_RS05820	CleRt_RS05820		CleRt_RS05820	1240734	1241144	-	iron-sulfur cluster assembly scaffold protein	incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1247	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05820
CleRt_RS05825	CleRT_11340		CleRt_RS05825	1241149	1242387	-	cysteine desulfurase		gene	gene1248	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05825
CleRt_RS05830	CleRT_11350		CleRt_RS05830	1242380	1243669	-	Fe-S cluster assembly protein SufD		gene	gene1249	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05830
CleRt_RS05835	CleRT_11360		CleRt_RS05835	1243672	1244406	-	Fe-S cluster assembly ATPase SufC		gene	gene1250	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05835
CleRt_RS05840	CleRT_11370		CleRt_RS05840	1244439	1245881	-	Fe-S cluster assembly protein SufB		gene	gene1251	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05840
CleRt_RS05845	CleRT_11380		CleRt_RS05845	1245928	1246386	-	SUF system Fe-S cluster assembly regulator		gene	gene1252	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05845
CleRt_RS05850	CleRT_11390		CleRt_RS05850	1246565	1247707	+	cation transporter		gene	gene1253	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05850
CleRt_RS05855	CleRT_11400		CleRt_RS05855	1247704	1249161	+	exodeoxyribonuclease I		gene	gene1254	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05855
CleRt_RS05860	CleRt_RS05860		CleRt_RS05860	1249245	1249490	+	hypothetical protein		gene	gene1255	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05860
CleRt_RS05865	CleRT_11440		CleRt_RS05865	1250812	1251249	-	hypothetical protein		gene	gene1258	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05865
CleRt_RS05870	CleRt_RS05870		CleRt_RS05870	1251608	1252030	-	hypothetical protein		gene	gene1259	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05870
CleRt_RS05875	CleRt_RS05875		CleRt_RS05875	1252274	1252600	-	hypothetical protein		gene	gene1260	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05875
CleRt_RS05880	CleRT_11460		CleRt_RS05880	1253989	1254666	-	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB		gene	gene1261	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05880
CleRt_RS05885	CleRT_11470		CleRt_RS05885	1254644	1255216	-	hypothetical protein		gene	gene1262	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05885
CleRt_RS05890	CleRT_11490		CleRt_RS05890	1255819	1256298	+	tRNA-specific adenosine deaminase	frameshifted	pseudogene	gene1265	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05890
CleRt_RS05895	CleRT_11500		CleRt_RS05895	1256391	1257652	+	exodeoxyribonuclease VII large subunit	frameshifted	pseudogene	gene1266	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05895
CleRt_RS05900	CleRT_11510		CleRt_RS05900	1257745	1259244	+	MFS transporter	frameshifted%3B internal stop	pseudogene	gene1267	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05900
CleRt_RS05905	CleRT_11520		CleRt_RS05905	1259261	1260598	-	ribosome biogenesis GTPase Der		gene	gene1268	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05905
CleRt_RS05910	CleRT_11530		CleRt_RS05910	1260786	1261175	-	hypothetical protein		gene	gene1269	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05910
CleRt_RS05915	CleRT_11540		CleRt_RS05915	1261225	1262550	-	histidine--tRNA ligase		gene	gene1270	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05915
CleRt_RS05920	CleRT_11550		CleRt_RS05920	1262547	1263143	-	transcriptional regulator		gene	gene1271	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05920
CleRt_RS05925	CleRT_11560		CleRt_RS05925	1263242	1264409	-	23S rRNA (adenine(2503)-C(2))-methyltransferase	frameshifted%3B internal stop	pseudogene	gene1272	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05925
CleRt_RS05930	CleRt_RS05930		CleRt_RS05930	1264775	1265068	+	hypothetical protein		gene	gene1273	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05930
CleRt_RS05935	CleRt_RS05935		CleRt_RS05935	1266066	1266287	+	hypothetical protein		gene	gene1274	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05935
CleRt_RS05940	CleRt_RS05940		CleRt_RS05940	1266284	1266526	+	hypothetical protein		gene	gene1275	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05940
CleRt_RS05945	CleRT_11590		CleRt_RS05945	1267198	1267989	-	polyprenyl synthetase family protein		gene	gene1276	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05945
CleRt_RS05950	CleRT_11600		CleRt_RS05950	1267990	1268418	-	nucleoside-diphosphate kinase		gene	gene1277	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05950
CleRt_RS05955	CleRT_11610		CleRt_RS05955	1268542	1270246	+	Na+/H+ antiporter	frameshifted%3B internal stop	pseudogene	gene1278	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05955
CleRt_RS05960	CleRT_11620		CleRt_RS05960	1270414	1271130	+	hypothetical protein		gene	gene1279	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05960
CleRt_RS05965	CleRT_11630		CleRt_RS05965	1271242	1272501	+	D-alanyl-D-alanine carboxypeptidase	penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors	gene	gene1280	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05965
CleRt_RS05970	CleRt_RS05970		CleRt_RS05970	1273142	1273486	-	hypothetical protein		gene	gene1281	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05970
CleRt_RS05980	CleRT_11670		CleRt_RS05980	1275357	1276022	+	lipoyl(octanoyl) transferase LipB		gene	gene1283	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05980
CleRt_RS05985	CleRT_11680		CleRt_RS05985	1276015	1276962	+	lipoyl synthase		gene	gene1284	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05985
CleRt_RS05990	CleRT_11690		CleRt_RS05990	1277002	1279074	+	membrane protein		gene	gene1285	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05990
CleRt_RS05995	CleRt_RS05995		CleRt_RS05995	1279166	1279441	-	hypothetical protein		gene	gene1286	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS05995
CleRt_RS06000	CleRT_11710		CleRt_RS06000	1280292	1280801	-	acyl-CoA thioesterase		gene	gene1287	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06000
CleRt_RS06005	CleRt_RS06005		CleRt_RS06005	1281063	1281386	+	hypothetical protein		gene	gene1288	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06005
CleRt_RS06010	CleRt_RS06010		CleRt_RS06010	1281634	1281873	+	DUF1731 domain-containing protein		gene	gene1289	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06010
CleRt_RS06015	CleRT_11730		CleRt_RS06015	1281937	1283202	+	6-phosphofructokinase	catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis	gene	gene1290	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06015
CleRt_RS06025	CleRT_11750		CleRt_RS06025	1283774	1284637	-	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1292	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06025
CleRt_RS06030	CleRT_11770		CleRt_RS06030	1285612	1286253	+	2-dehydro-3-deoxyphosphogluconate aldolase		gene	gene1294	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06030
CleRt_RS06035	CleRT_11780		CleRt_RS06035	1286253	1286813	+	thioredoxin family protein		gene	gene1295	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06035
CleRt_RS06040	CleRT_11790		CleRt_RS06040	1286883	1287475	+	sugar transporter	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1296	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06040
CleRt_RS06045	CleRT_11800		CleRt_RS06045	1287488	1287967	-	transcription elongation factor GreA		gene	gene1297	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06045
CleRt_RS06050	CleRt_RS06050		CleRt_RS06050	1288151	1288336	+	hypothetical protein		gene	gene1298	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06050
CleRt_RS06055	CleRT_11810	carB	carB	1288443	1291670	-	carbamoyl-phosphate synthase large subunit	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity	gene	gene1299	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06055
CleRt_RS06060	CleRT_11820		CleRt_RS06060	1291677	1292831	-	carbamoyl-phosphate synthase small subunit	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers	gene	gene1300	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06060
CleRt_RS06065	CleRT_11830		CleRt_RS06065	1293003	1294127	-	molecular chaperone DnaJ		gene	gene1301	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06065
CleRt_RS06070	CleRT_11840		CleRt_RS06070	1294308	1296251	-	molecular chaperone DnaK		gene	gene1302	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06070
CleRt_RS06075	CleRt_RS06075		CleRt_RS06075	1296352	1296582	-	hypothetical protein		gene	gene1303	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06075
CleRt_RS06080	CleRT_11850		CleRt_RS06080	1296775	1297389	-	nucleotide exchange factor GrpE		gene	gene1304	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06080
CleRt_RS06085	CleRT_11860		CleRt_RS06085	1297520	1298407	+	NAD(+) kinase		gene	gene1305	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06085
CleRt_RS06090	CleRT_11870		CleRt_RS06090	1298409	1299945	+	DNA repair protein RecN	frameshifted%3B internal stop	pseudogene	gene1306	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06090
CleRt_RS06095	CleRT_11880		CleRt_RS06095	1300021	1300449	-	ferric iron uptake transcriptional regulator		gene	gene1307	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06095
CleRt_RS06100	CleRT_11890		CleRt_RS06100	1300683	1301021	+	outer membrane protein assembly factor BamE		gene	gene1308	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06100
CleRt_RS06105	CleRT_11900		CleRt_RS06105	1301023	1301319	-	RnfH family protein		gene	gene1309	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06105
CleRt_RS06110	CleRT_11910		CleRt_RS06110	1301316	1301756	-	ubiquinone-binding protein		gene	gene1310	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06110
CleRt_RS06115	CleRT_11920		CleRt_RS06115	1301783	1302262	+	SsrA-binding protein SmpB		gene	gene1311	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06115
CleRt_RS06120	CleRT_11930		CleRt_RS06120	1302263	1303112	+	peptide-methionine (S)-S-oxide reductase	frameshifted%3B internal stop	pseudogene	gene1312	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06120
CleRt_RS06125	CleRT_11940		CleRt_RS06125	1303576	1304667	-	cell filamentation protein Fic	frameshifted%3B internal stop	pseudogene	gene1314	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06125
CleRt_RS06130	CleRt_RS06130		CleRt_RS06130	1305675	1305905	-	hypothetical protein		gene	gene1315	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06130
CleRt_RS06135	CleRt_RS06135		CleRt_RS06135	1306519	1306776	-	hypothetical protein		gene	gene1316	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06135
CleRt_RS06140	CleRt_RS06140		CleRt_RS06140	1306789	1306980	-	hypothetical protein		gene	gene1317	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06140
CleRt_RS06145	CleRt_RS06145		CleRt_RS06145	1306984	1307202	-	hypothetical protein		gene	gene1318	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06145
CleRt_RS06150	CleRt_RS06150		CleRt_RS06150	1309115	1309342	-	hypothetical protein		gene	gene1319	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06150
CleRt_RS06155	CleRt_RS06155		CleRt_RS06155	1315573	1315803	-	hypothetical protein		gene	gene1321	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06155
CleRt_RS06160	CleRT_12020		CleRt_RS06160	1316278	1316553	+	hypothetical protein		gene	gene1322	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06160
CleRt_RS06175	CleRT_12050		CleRt_RS06175	1318847	1319308	-	thioredoxin-dependent thiol peroxidase		gene	gene1324	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06175
CleRt_RS06180	CleRT_12070		CleRt_RS06180	1320266	1320646	+	spermidine acetyltransferase	internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1325	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06180
CleRt_RS06185	CleRT_12080		CleRt_RS06185	1320890	1321156	-	hypothetical protein		gene	gene1326	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06185
CleRt_RS06190	CleRT_12090		CleRt_RS06190	1321170	1321547	-	DNA-binding protein		gene	gene1327	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06190
CleRt_RS06195	CleRT_12100		CleRt_RS06195	1322019	1322630	+	phosphoribosyl transferase	frameshifted%3B internal stop	pseudogene	gene1328	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06195
CleRt_RS06200	CleRT_12120		CleRt_RS06200	1323336	1324220	-	methyltransferase domain-containing protein		gene	gene1330	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06200
CleRt_RS06205	CleRT_12140		CleRt_RS06205	1325133	1326545	-	dihydrolipoyl dehydrogenase		gene	gene1332	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06205
CleRt_RS06210	CleRT_12150		CleRt_RS06210	1326628	1327944	-	branched-chain alpha-keto acid dehydrogenase subunit E2		gene	gene1333	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06210
CleRt_RS06215	CleRT_12160		CleRt_RS06215	1327958	1330612	-	pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type		gene	gene1334	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06215
CleRt_RS06220	CleRT_12170		CleRt_RS06220	1330682	1331460	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1335	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06220
CleRt_RS06225	CleRT_12180		CleRt_RS06225	1331555	1332721	-	sodium:hydrogen antiporter		gene	gene1336	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06225
CleRt_RS06230	CleRT_12190		CleRt_RS06230	1332952	1333358	+	nucleoid-structuring protein H-NS	frameshifted	pseudogene	gene1337	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06230
CleRt_RS06235	CleRT_12200		CleRt_RS06235	1333470	1334156	-	adenylate kinase		gene	gene1338	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06235
CleRt_RS06240	CleRT_12220		CleRt_RS06240	1334546	1335549	-	magnesium/cobalt efflux protein	frameshifted%3B internal stop	pseudogene	gene1339	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06240
CleRt_RS06245	CleRT_12230		CleRt_RS06245	1335794	1336289	-	cytochrome C assembly protein	frameshifted	pseudogene	gene1340	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06245
CleRt_RS06250	CleRT_12240		CleRt_RS06250	1336322	1337706	+	signal recognition particle protein	frameshifted	pseudogene	gene1341	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06250
CleRt_RS06255	CleRT_12250		CleRt_RS06255	1337875	1338270	+	30S ribosomal protein S16		gene	gene1342	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06255
CleRt_RS06260	CleRT_12260		CleRt_RS06260	1338285	1338788	+	ribosome maturation factor RimM		gene	gene1343	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06260
CleRt_RS06265	CleRT_12270		CleRt_RS06265	1338775	1339533	+	tRNA (guanosine(37)-N1)-methyltransferase TrmD		gene	gene1344	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06265
CleRt_RS06270	CleRT_12280		CleRt_RS06270	1339530	1339877	+	50S ribosomal protein L19		gene	gene1345	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06270
CleRt_RS06275	CleRT_12290		CleRt_RS06275	1339899	1340390	+	methylated-DNA--[protein]-cysteine S-methyltransferase		gene	gene1346	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06275
CleRt_RS06280	CleRT_12300		CleRt_RS06280	1340417	1341718	-	MFS transporter		gene	gene1347	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06280
CleRt_RS06285	CleRT_12310		CleRt_RS06285	1341801	1342559	+	folate-binding protein		gene	gene1348	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06285
CleRt_RS06290	CleRT_12320		CleRt_RS06290	1342753	1344264	-	lysine--tRNA ligase		gene	gene1349	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06290
CleRt_RS06295	CleRT_12330		CleRt_RS06295	1344330	1345394	-	peptide chain release factor 2		gene	gene1350	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06295
CleRt_RS06300	CleRT_12340		CleRt_RS06300	1345438	1345638	-	DUF1289 domain-containing protein		gene	gene1351	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06300
CleRt_RS06305	CleRt_RS06305		CleRt_RS06305	1346219	1346590	+	hypothetical protein		gene	gene1352	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06305
CleRt_RS06310	CleRt_RS06310		CleRt_RS06310	1346587	1346853	+	APC family permease		gene	gene1353	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06310
CleRt_RS06315	CleRT_12360		CleRt_RS06315	1347344	1348132	+	3-methyl-2-oxobutanoate hydroxymethyltransferase		gene	gene1354	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06315
CleRt_RS06320	CleRT_12370		CleRt_RS06320	1348146	1348913	+	pantoate--beta-alanine ligase		gene	gene1355	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06320
CleRt_RS06330	CleRt_RS06330		CleRt_RS06330	1349774	1350070	+	type III pantothenate kinase		gene	gene1358	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06330
CleRt_RS06340	CleRT_12410		CleRt_RS06340	1351911	1352392	+	hypothetical protein	frameshifted	pseudogene	gene1362	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06340
CleRt_RS06345	CleRt_RS06345		CleRt_RS06345	1353850	1354245	-	hypothetical protein		gene	gene1364	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06345
CleRt_RS06350	CleRT_t038		CleRt_RS06350	1354540	1354615	-	tRNA-Lys		tRNA	gene1365	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06350
CleRt_RS06355	CleRT_12450		CleRt_RS06355	1355164	1355658	-	lipoprotein signal peptidase		gene	gene1366	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06355
CleRt_RS06360	CleRT_12460		CleRt_RS06360	1355722	1358532	-	isoleucine--tRNA ligase		gene	gene1367	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06360
CleRt_RS06365	CleRT_12470		CleRt_RS06365	1358525	1359196	-	DUF2807 domain-containing protein	frameshifted%3B internal stop	pseudogene	gene1368	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06365
CleRt_RS06370	CleRT_12480		CleRt_RS06370	1359308	1360234	-	bifunctional riboflavin kinase/FAD synthetase		gene	gene1369	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06370
CleRt_RS06375	CleRT_12490		CleRt_RS06375	1360239	1361786	-	murein biosynthesis integral membrane protein MurJ		gene	gene1370	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06375
CleRt_RS06380	CleRT_12500		CleRt_RS06380	1361905	1362171	+	30S ribosomal protein S20		gene	gene1371	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06380
CleRt_RS06385	CleRT_12510	obgE	obgE	1362223	1363245	-	GTPase ObgE	ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication	gene	gene1372	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06385
CleRt_RS06390	CleRT_12520		CleRt_RS06390	1363388	1363654	-	50S ribosomal protein L27		gene	gene1373	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06390
CleRt_RS06395	CleRT_12530		CleRt_RS06395	1363644	1363997	-	50S ribosomal protein L21		gene	gene1374	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06395
CleRt_RS06400	CleRT_12540		CleRt_RS06400	1364140	1365144	+	octaprenyl diphosphate synthase		gene	gene1375	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06400
CleRt_RS06410	CleRT_12590		CleRt_RS06410	1369764	1370462	+	DNA-binding response regulator	two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB	gene	gene1377	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06410
CleRt_RS06415	CleRT_12600		CleRt_RS06415	1370446	1371198	+	phosphate regulon sensor histidine kinase PhoR		gene	gene1378	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06415
CleRt_RS06420	CleRT_12610		CleRt_RS06420	1371321	1372685	+	MFS transporter		gene	gene1379	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06420
CleRt_RS06425	CleRT_12620		CleRt_RS06425	1372744	1374269	-	amino acid permease	frameshifted%3B internal stop	pseudogene	gene1380	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06425
CleRt_RS06430	CleRT_12640		CleRt_RS06430	1375352	1376190	+	protease SohB	frameshifted%3B internal stop	pseudogene	gene1381	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06430
CleRt_RS06435	CleRT_12650		CleRt_RS06435	1376359	1377252	+	cation transporter		gene	gene1382	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06435
CleRt_RS06440	CleRT_12660		CleRt_RS06440	1377366	1377661	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1383	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06440
CleRt_RS06445	CleRT_12670		CleRt_RS06445	1377624	1378370	+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG		gene	gene1384	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06445
CleRt_RS06450	CleRT_12680		CleRt_RS06450	1378363	1379031	+	phosphoglycolate phosphatase		gene	gene1385	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06450
CleRt_RS06455	CleRT_12690		CleRt_RS06455	1379152	1380275	+	MFS transporter	frameshifted%3B internal stop	pseudogene	gene1386	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06455
CleRt_RS06460	CleRT_12700		CleRt_RS06460	1380327	1381309	+	6-phosphofructokinase	frameshifted%3B internal stop	pseudogene	gene1387	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06460
CleRt_RS06465	CleRT_12710		CleRt_RS06465	1381325	1383958	-	aminopeptidase N		gene	gene1388	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06465
CleRt_RS06470	CleRT_12720		CleRt_RS06470	1384228	1384536	+	DNA-binding transcriptional regulator Fis		gene	gene1389	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06470
CleRt_RS06480	CleRt_RS06480		CleRt_RS06480	1386584	1386820	-	hypothetical protein		gene	gene1392	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06480
CleRt_RS06485	CleRT_12750		CleRt_RS06485	1387130	1388537	-	thiamine-phosphate pyrophosphorylase	frameshifted%3B internal stop	pseudogene	gene1393	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06485
CleRt_RS06495	CleRT_12770		CleRt_RS06495	1389366	1390434	-	glycine oxidase ThiO	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1395	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06495
CleRt_RS06500	CleRT_12780		CleRt_RS06500	1390517	1392058	-	phosphomethylpyrimidine synthase	frameshifted%3B internal stop	pseudogene	gene1396	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06500
CleRt_RS06510	CleRt_RS06510		CleRt_RS06510	1392820	1393032	-	hypothetical protein		gene	gene1397	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06510
CleRt_RS06515	CleRT_12800		CleRt_RS06515	1393291	1394552	+	phosphoribosylamine--glycine ligase	frameshifted%3B internal stop	pseudogene	gene1398	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06515
CleRt_RS06520	CleRT_12810		CleRt_RS06520	1394574	1396262	-	acyl-CoA synthetase	frameshifted%3B internal stop	pseudogene	gene1399	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06520
CleRt_RS06525	CleRT_12820		CleRt_RS06525	1396278	1396526	-	acyl carrier protein		gene	gene1400	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06525
CleRt_RS06530	CleRT_12830		CleRt_RS06530	1396530	1397400	-	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1401	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06530
CleRt_RS06545	CleRt_RS06545		CleRt_RS06545	1398582	1398836	+	hypothetical protein		gene	gene1403	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06545
CleRt_RS06550	CleRt_RS06550		CleRt_RS06550	1399441	1399764	+	hypothetical protein		gene	gene1405	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06550
CleRt_RS06555	CleRt_RS06555		CleRt_RS06555	1400284	1400481	+	hypothetical protein		gene	gene1406	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06555
CleRt_RS06560	CleRT_12870		CleRt_RS06560	1402174	1402881	-	DNA polymerase III subunit epsilon		gene	gene1408	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06560
CleRt_RS06565	CleRT_12880		CleRt_RS06565	1402898	1403350	-	ribonuclease HI		gene	gene1409	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06565
CleRt_RS06570	CleRT_12890		CleRt_RS06570	1403344	1404075	-	class I SAM-dependent methyltransferase		gene	gene1410	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06570
CleRt_RS06580	CleRT_12910		CleRt_RS06580	1404849	1406303	+	lytic transglycosylase		gene	gene1411	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06580
CleRt_RS06585	CleRT_12920		CleRt_RS06585	1406364	1407215	+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD		gene	gene1412	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06585
CleRt_RS06595	CleRT_12940		CleRt_RS06595	1408299	1410194	-	molecular chaperone HtpG		gene	gene1414	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06595
CleRt_RS06600	CleRT_12950		CleRt_RS06600	1410303	1410977	-	membrane protein		gene	gene1415	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06600
CleRt_RS06605	CleRT_12960		CleRt_RS06605	1411404	1413485	-	DNA helicase RecG	catalyzes branch migration in Holliday junction intermediates	gene	gene1416	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06605
CleRt_RS06610	CleRT_12970		CleRt_RS06610	1413492	1413875	-	endoribonuclease		gene	gene1417	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06610
CleRt_RS06615	CleRT_12980		CleRt_RS06615	1413900	1416023	-	(p)ppGpp synthetase		gene	gene1418	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06615
CleRt_RS06620	CleRT_12990		CleRt_RS06620	1416057	1416344	-	DNA-directed RNA polymerase subunit omega		gene	gene1419	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06620
CleRt_RS06625	CleRT_13000		CleRt_RS06625	1416399	1417028	-	guanylate kinase		gene	gene1420	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06625
CleRt_RS06635	CleRT_13020		CleRt_RS06635	1418082	1418801	+	ribonuclease PH		gene	gene1423	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06635
CleRt_RS06640	CleRT_13030		CleRt_RS06640	1418855	1419643	+	glutamate racemase		gene	gene1424	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06640
CleRt_RS06645	CleRT_13040		CleRt_RS06645	1419699	1420466	-	exodeoxyribonuclease III		gene	gene1425	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06645
CleRt_RS06650	CleRT_13050		CleRt_RS06650	1420565	1421191	+	orotate phosphoribosyltransferase		gene	gene1426	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06650
CleRt_RS06655	CleRT_13060		CleRt_RS06655	1421188	1422588	-	phosphomannomutase/phosphoglucomutase		gene	gene1427	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06655
CleRt_RS06660	CleRT_13070		CleRt_RS06660	1422584	1423042	-	dUTP diphosphatase	catalyzes the formation of dUMP from dUTP	gene	gene1428	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06660
CleRt_RS06670	CleRT_13090		CleRt_RS06670	1424067	1424303	+	50S ribosomal protein L28		gene	gene1431	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06670
CleRt_RS06675	CleRT_13100		CleRt_RS06675	1424324	1424536	+	50S ribosomal protein L33		gene	gene1432	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06675
CleRt_RS06680	CleRT_13110		CleRt_RS06680	1424588	1424836	-	ferredoxin		gene	gene1433	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06680
CleRt_RS06685	CleRT_13120		CleRt_RS06685	1424848	1425333	-	pantetheine-phosphate adenylyltransferase		gene	gene1434	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06685
CleRt_RS06690	CleRT_13130		CleRt_RS06690	1425426	1425929	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase		gene	gene1435	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06690
CleRt_RS06695	CleRT_13140		CleRt_RS06695	1425932	1427248	-	polynucleotide adenylyltransferase PcnB		gene	gene1436	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06695
CleRt_RS06700	CleRT_t039		CleRt_RS06700	1427318	1427393	+	tRNA-Glu		tRNA	gene1437	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06700
CleRt_RS06705	CleRT_13150		CleRt_RS06705	1427454	1427813	-	hypothetical protein	internal stop	pseudogene	gene1438	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06705
CleRt_RS06710	CleRT_13170		CleRt_RS06710	1428625	1429379	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1440	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06710
CleRt_RS06715	CleRT_13180		CleRt_RS06715	1429554	1430405	+	amidinotransferase	frameshifted%3B internal stop	pseudogene	gene1441	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06715
CleRt_RS06720	CleRT_13190		CleRt_RS06720	1430417	1431808	+	hypothetical protein		gene	gene1442	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06720
CleRt_RS06725	CleRT_13200		CleRt_RS06725	1431747	1432340	-	MarC family protein		gene	gene1443	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06725
CleRt_RS06730	CleRT_13210		CleRt_RS06730	1432426	1433574	-	FAD-dependent oxidoreductase		gene	gene1444	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06730
CleRt_RS06735	CleRT_13220		CleRt_RS06735	1433543	1434626	-	uroporphyrinogen decarboxylase	frameshifted	pseudogene	gene1445	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06735
CleRt_RS06740	CleRT_13230		CleRt_RS06740	1434932	1437787	-	excinuclease ABC subunit UvrA		gene	gene1446	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06740
CleRt_RS06745	CleRT_13240		CleRt_RS06745	1437885	1438319	-	hypothetical protein		gene	gene1447	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06745
CleRt_RS06750	CleRT_13270		CleRt_RS06750	1440320	1441726	+	MFS transporter		gene	gene1449	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06750
CleRt_RS06755	CleRT_13280		CleRt_RS06755	1441754	1442218	+	single-stranded DNA-binding protein		gene	gene1450	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06755
CleRt_RS06760	CleRT_13290		CleRt_RS06760	1442679	1443872	-	enoyl-[acyl-carrier-protein] reductase FabV	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity	gene	gene1451	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06760
CleRt_RS06765	CleRt_RS06765		CleRt_RS06765	1444141	1444494	+	hypothetical protein		gene	gene1452	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06765
CleRt_RS06770	CleRT_13310		CleRt_RS06770	1445928	1446215	+	hypothetical protein		gene	gene1453	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06770
CleRt_RS06775	CleRT_13320		CleRt_RS06775	1447011	1448296	-	glucose/galactose MFS transporter	frameshifted%3B internal stop	pseudogene	gene1454	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06775
CleRt_RS06780	CleRT_13330		CleRt_RS06780	1448300	1448686	-	50S ribosomal protein L17		gene	gene1455	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06780
CleRt_RS06785	CleRT_13340		CleRt_RS06785	1448690	1449673	-	DNA-directed RNA polymerase subunit alpha		gene	gene1456	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06785
CleRt_RS06790	CleRT_13350		CleRt_RS06790	1449686	1450306	-	30S ribosomal protein S4		gene	gene1457	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06790
CleRt_RS06795	CleRT_13360		CleRt_RS06795	1450321	1450692	-	30S ribosomal protein S11		gene	gene1458	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06795
CleRt_RS06800	CleRT_13370		CleRt_RS06800	1450714	1451073	-	30S ribosomal protein S13		gene	gene1459	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06800
CleRt_RS06805	CleRT_13390		CleRt_RS06805	1451396	1452724	-	preprotein translocase subunit SecY		gene	gene1461	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06805
CleRt_RS06810	CleRT_13400		CleRt_RS06810	1452717	1453151	-	50S ribosomal protein L15		gene	gene1462	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06810
CleRt_RS06815	CleRT_13410		CleRt_RS06815	1453153	1453341	-	50S ribosomal protein L30		gene	gene1463	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06815
CleRt_RS06820	CleRT_13420		CleRt_RS06820	1453345	1453851	-	30S ribosomal protein S5		gene	gene1464	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06820
CleRt_RS06825	CleRT_13430		CleRt_RS06825	1453863	1454213	-	50S ribosomal protein L18		gene	gene1465	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06825
CleRt_RS06830	CleRT_13440		CleRt_RS06830	1454213	1454749	-	50S ribosomal protein L6		gene	gene1466	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06830
CleRt_RS06835	CleRT_13450		CleRt_RS06835	1454762	1455157	-	30S ribosomal protein S8		gene	gene1467	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06835
CleRt_RS06840	CleRT_13460		CleRt_RS06840	1455159	1455458	-	30S ribosomal protein S14		gene	gene1468	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06840
CleRt_RS06845	CleRT_13470		CleRt_RS06845	1455469	1456008	-	50S ribosomal protein L5		gene	gene1469	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06845
CleRt_RS06850	CleRT_13480		CleRt_RS06850	1456019	1456342	-	50S ribosomal protein L24		gene	gene1470	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06850
CleRt_RS06855	CleRT_13490		CleRt_RS06855	1456353	1456721	-	50S ribosomal protein L14		gene	gene1471	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06855
CleRt_RS06860	CleRT_13500		CleRt_RS06860	1456732	1456998	-	30S ribosomal protein S17		gene	gene1472	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06860
CleRt_RS06865	CleRT_13510		CleRt_RS06865	1456995	1457189	-	50S ribosomal protein L29		gene	gene1473	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06865
CleRt_RS06870	CleRT_13520		CleRt_RS06870	1457189	1457602	-	50S ribosomal protein L16		gene	gene1474	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06870
CleRt_RS06875	CleRT_13530		CleRt_RS06875	1457616	1458308	-	30S ribosomal protein S3		gene	gene1475	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06875
CleRt_RS06880	CleRT_13540		CleRt_RS06880	1458323	1458658	-	50S ribosomal protein L22		gene	gene1476	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06880
CleRt_RS06885	CleRT_13550		CleRt_RS06885	1458661	1458942	-	30S ribosomal protein S19		gene	gene1477	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06885
CleRt_RS06890	CleRT_13560		CleRt_RS06890	1458959	1459783	-	50S ribosomal protein L2		gene	gene1478	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06890
CleRt_RS06895	CleRT_13570		CleRt_RS06895	1459804	1460091	-	50S ribosomal protein L23		gene	gene1479	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06895
CleRt_RS06900	CleRT_13580		CleRt_RS06900	1460088	1460705	-	50S ribosomal protein L4		gene	gene1480	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06900
CleRt_RS06905	CleRT_13590		CleRt_RS06905	1460705	1461358	-	50S ribosomal protein L3		gene	gene1481	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06905
CleRt_RS06910	CleRT_13600		CleRt_RS06910	1461408	1461743	-	30S ribosomal protein S10		gene	gene1482	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06910
CleRt_RS06915	CleRT_13610		CleRt_RS06915	1461759	1462952	-	elongation factor Tu		gene	gene1483	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06915
CleRt_RS06920	CleRT_13620		CleRt_RS06920	1462972	1465071	-	elongation factor G		gene	gene1484	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06920
CleRt_RS06925	CleRT_13630		CleRt_RS06925	1465081	1465665	-	30S ribosomal protein S7		gene	gene1485	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06925
CleRt_RS06930	CleRT_13640		CleRt_RS06930	1465682	1466056	-	30S ribosomal protein S12		gene	gene1486	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06930
CleRt_RS06935	CleRT_13650		CleRt_RS06935	1466272	1470492	-	DNA-directed RNA polymerase subunit beta'		gene	gene1487	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06935
CleRt_RS06940	CleRT_13660		CleRt_RS06940	1470513	1474634	-	DNA-directed RNA polymerase subunit beta		gene	gene1488	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06940
CleRt_RS06945	CleRT_13670		CleRt_RS06945	1474814	1475197	-	50S ribosomal protein L7/L12		gene	gene1489	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06945
CleRt_RS06950	CleRT_13680		CleRt_RS06950	1475233	1475760	-	50S ribosomal protein L10		gene	gene1490	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06950
CleRt_RS06955	CleRT_13690		CleRt_RS06955	1476035	1476727	-	50S ribosomal protein L1		gene	gene1491	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06955
CleRt_RS06960	CleRT_13700		CleRt_RS06960	1476727	1477164	-	50S ribosomal protein L11		gene	gene1492	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06960
CleRt_RS06965	CleRT_13710		CleRt_RS06965	1477240	1477950	-	transcription termination/antitermination protein NusG	internal stop	pseudogene	gene1493	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06965
CleRt_RS06975	CleRT_t040		CleRt_RS06975	1478212	1478287	-	tRNA-Trp		tRNA	gene1494	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06975
CleRt_RS06980	CleRT_13730		CleRt_RS06980	1478329	1479522	-	elongation factor Tu		gene	gene1495	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06980
CleRt_RS06985	CleRT_t041		CleRt_RS06985	1479577	1479652	-	tRNA-Thr		tRNA	gene1496	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06985
CleRt_RS06990	CleRT_t042		CleRt_RS06990	1479652	1479725	-	tRNA-Gly		tRNA	gene1497	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06990
CleRt_RS06995	CleRT_t043		CleRt_RS06995	1479833	1479914	-	tRNA-Tyr		tRNA	gene1498	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS06995
CleRt_RS07000	CleRT_13740		CleRt_RS07000	1480135	1480884	-	phosphopantetheine-protein transferase		gene	gene1499	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07000
CleRt_RS07015	CleRT_13770		CleRt_RS07015	1483575	1484297	+	BAX inhibitor (BI)-1/YccA family protein		gene	gene1503	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07015
CleRt_RS07020	CleRt_RS07020		CleRt_RS07020	1484799	1484984	-	hypothetical protein		gene	gene1504	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07020
CleRt_RS07025	CleRt_RS07025		CleRt_RS07025	1485219	1485455	-	hypothetical protein		gene	gene1505	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07025
CleRt_RS07030	CleRt_RS07030		CleRt_RS07030	1486824	1487078	+	hypothetical protein		gene	gene1506	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07030
CleRt_RS07035	CleRt_RS07035		CleRt_RS07035	1489016	1489279	+	GNAT family N-acetyltransferase		gene	gene1508	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07035
CleRt_RS07040	CleRT_t044		CleRt_RS07040	1490611	1490683	-	tRNA-Thr		tRNA	gene1509	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07040
CleRt_RS07045	CleRt_RS07045		CleRt_RS07045	1493325	1493564	-	hypothetical protein		gene	gene1510	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07045
CleRt_RS07050	CleRT_13820		CleRt_RS07050	1494646	1494948	+	hypothetical protein		gene	gene1511	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07050
CleRt_RS07060	CleRT_13840		CleRt_RS07060	1496621	1498045	-	glutamate--tRNA ligase		gene	gene1513	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07060
CleRt_RS07065	CleRT_13850		CleRt_RS07065	1498115	1498413	+	hypothetical protein	frameshifted	pseudogene	gene1514	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07065
CleRt_RS07075	CleRT_13870		CleRt_RS07075	1499148	1500104	-	type I pantothenate kinase		gene	gene1515	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07075
CleRt_RS07080	CleRT_13880		CleRt_RS07080	1500232	1501965	+	membrane protein		gene	gene1516	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07080
CleRt_RS07085	CleRT_13890		CleRt_RS07085	1501965	1504805	+	translocation/assembly module TamB		gene	gene1517	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07085
CleRt_RS07090	CleRt_RS07090		CleRt_RS07090	1505221	1505427	-	hypothetical protein		gene	gene1518	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07090
CleRt_RS07095	CleRT_13900		CleRt_RS07095	1505428	1505808	-	hypothetical protein		gene	gene1519	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07095
CleRt_RS07100	CleRt_RS07100		CleRt_RS07100	1506013	1506213	-	hypothetical protein		gene	gene1520	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07100
CleRt_RS07110	CleRT_13920		CleRt_RS07110	1507242	1508615	+	L-serine ammonia-lyase		gene	gene1522	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07110
CleRt_RS07115	CleRT_r10	rrf	rrf	1509175	1509289	-	5S ribosomal RNA		rRNA	gene1523	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07115
CleRt_RS07120	CleRT_r20		CleRt_RS07120	1509319	1512963	-	23S ribosomal RNA		rRNA	gene1524	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07120
CleRt_RS07125	CleRT_t045		CleRt_RS07125	1513206	1513278	-	tRNA-Ala		tRNA	gene1525	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07125
CleRt_RS07130	CleRT_t046		CleRt_RS07130	1513284	1513360	-	tRNA-Ile		tRNA	gene1526	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07130
CleRt_RS07135	CleRT_r30		CleRt_RS07135	1513506	1515057	-	16S ribosomal RNA		rRNA	gene1527	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07135
CleRt_RS07140	CleRt_RS07140		CleRt_RS07140	1517278	1517502	-	hypothetical protein		gene	gene1528	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07140
CleRt_RS07145	CleRt_RS07145		CleRt_RS07145	1518211	1518465	+	hypothetical protein		gene	gene1529	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07145
CleRt_RS07150	CleRt_RS07150		CleRt_RS07150	1519014	1519286	-	hypothetical protein		gene	gene1530	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07150
CleRt_RS07155	CleRT_13940		CleRt_RS07155	1520150	1520560	+	hypothetical protein		gene	gene1531	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07155
CleRt_RS07160	CleRT_13950		CleRt_RS07160	1520806	1522005	-	tyrosine--tRNA ligase		gene	gene1532	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07160
CleRt_RS07165	CleRT_13960		CleRt_RS07165	1522017	1523371	+	peptidase M23	frameshifted%3B internal stop	pseudogene	gene1533	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07165
CleRt_RS07170	CleRT_13970		CleRt_RS07170	1523386	1524467	+	anhydro-N-acetylmuramic acid kinase	frameshifted%3B internal stop	pseudogene	gene1534	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07170
CleRt_RS07175	CleRt_RS07175		CleRt_RS07175	1524510	1524881	-	SET domain-containing protein		gene	gene1535	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07175
CleRt_RS07180	CleRt_RS07180		CleRt_RS07180	1525452	1525688	-	hypothetical protein		gene	gene1537	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07180
CleRt_RS07185	CleRt_RS07185		CleRt_RS07185	1525924	1526157	-	DUF1460 domain-containing protein		gene	gene1538	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07185
CleRt_RS07190	CleRT_14000		CleRt_RS07190	1526270	1526991	+	glycine/betaine ABC transporter ATP-binding protein	frameshifted%3B internal stop	pseudogene	gene1539	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07190
CleRt_RS07200	CleRT_14020		CleRt_RS07200	1527940	1528618	-	serine/threonine protein kinase	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1541	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07200
CleRt_RS07205	CleRt_RS07205		CleRt_RS07205	1529253	1529489	+	hypothetical protein		gene	gene1542	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07205
CleRt_RS07210	CleRt_RS07210		CleRt_RS07210	1529540	1529791	+	hypothetical protein		gene	gene1543	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07210
CleRt_RS07215	CleRt_RS07215		CleRt_RS07215	1530089	1530313	+	hypothetical protein		gene	gene1544	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07215
CleRt_RS07220	CleRt_RS07220		CleRt_RS07220	1531113	1531322	+	XRE family transcriptional regulator		gene	gene1545	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07220
CleRt_RS07230	CleRT_14100		CleRt_RS07230	1539013	1540215	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1547	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07230
CleRt_RS07235	CleRT_t047		CleRt_RS07235	1540394	1540469	-	tRNA-Thr		tRNA	gene1548	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07235
CleRt_RS07240	CleRT_14120		CleRt_RS07240	1541177	1542733	+	type 4 pili biogenesis protein (nuleotide-binding protein)	frameshifted%3B internal stop	pseudogene	gene1550	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07240
CleRt_RS07245	CleRt_RS07245		CleRt_RS07245	1543400	1543618	+	hypothetical protein		gene	gene1551	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07245
CleRt_RS07250	CleRt_RS07250		CleRt_RS07250	1543605	1543802	+	hypothetical protein		gene	gene1552	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07250
CleRt_RS07255	CleRT_14150		CleRt_RS07255	1544684	1545280	+	dephospho-CoA kinase		gene	gene1554	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07255
CleRt_RS07260	CleRT_14160		CleRt_RS07260	1545466	1546245	+	cell division protein ZapD		gene	gene1555	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07260
CleRt_RS07265	CleRT_14170		CleRt_RS07265	1546225	1546629	-	8-oxo-dGTP diphosphatase MutT		gene	gene1556	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07265
CleRt_RS07270	CleRT_14180		CleRt_RS07270	1546638	1549379	-	preprotein translocase subunit SecA		gene	gene1557	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07270
CleRt_RS07275	CleRT_14190		CleRt_RS07275	1549428	1549736	+	hypothetical protein	internal stop	pseudogene	gene1558	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07275
CleRt_RS07280	CleRt_RS07280		CleRt_RS07280	1550248	1550442	-	hypothetical protein		gene	gene1559	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07280
CleRt_RS07285	CleRT_14200		CleRt_RS07285	1551860	1552771	-	UDP-3-O-acyl-N-acetylglucosamine deacetylase		gene	gene1560	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07285
CleRt_RS07290	CleRT_14210		CleRt_RS07290	1552880	1554040	-	cell division protein FtsZ		gene	gene1561	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07290
CleRt_RS07295	CleRT_14220		CleRt_RS07295	1554051	1555283	-	cell division protein FtsA		gene	gene1562	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07295
CleRt_RS07300	CleRT_14230		CleRt_RS07300	1555686	1555952	+	hypothetical protein		gene	gene1563	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07300
CleRt_RS07305	CleRT_14260		CleRt_RS07305	1557910	1558653	-	cell division protein FtsQ		gene	gene1565	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07305
CleRt_RS07310	CleRT_14270		CleRt_RS07310	1558634	1559545	-	UDP-N-acetylenolpyruvoylglucosamine reductase		gene	gene1566	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07310
CleRt_RS07315	CleRT_14280		CleRt_RS07315	1559560	1560972	-	UDP-N-acetylmuramate--L-alanine ligase		gene	gene1567	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07315
CleRt_RS07320	CleRT_14290		CleRt_RS07320	1560969	1562036	-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase		gene	gene1568	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07320
CleRt_RS07325	CleRT_14300		CleRt_RS07325	1562118	1563272	-	putative lipid II flippase FtsW		gene	gene1569	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07325
CleRt_RS07330	CleRT_14310		CleRt_RS07330	1563272	1564600	-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase		gene	gene1570	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07330
CleRt_RS07335	CleRT_14320		CleRt_RS07335	1564602	1565687	-	phospho-N-acetylmuramoyl-pentapeptide-transferase		gene	gene1571	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07335
CleRt_RS07340	CleRT_14330		CleRt_RS07340	1565690	1567030	-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase		gene	gene1572	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07340
CleRt_RS07345	CleRT_14340		CleRt_RS07345	1567027	1568502	-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase		gene	gene1573	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07345
CleRt_RS07350	CleRT_14350		CleRt_RS07350	1568709	1570370	-	penicillin-binding protein 2		gene	gene1574	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07350
CleRt_RS07355	CleRT_14360		CleRt_RS07355	1570371	1570727	-	cell division protein FtsL		gene	gene1575	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07355
CleRt_RS07360	CleRT_14370		CleRt_RS07360	1570724	1571644	-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH		gene	gene1576	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07360
CleRt_RS07365	CleRT_14380		CleRt_RS07365	1571646	1571993	-	cell division/cell wall cluster transcriptional repressor MraZ	frameshifted%3B internal stop	pseudogene	gene1577	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07365
CleRt_RS07370	CleRT_14390		CleRt_RS07370	1572294	1572745	-	YajQ family cyclic di-GMP-binding protein	nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription%3B frameshifted%3B internal stop	pseudogene	gene1578	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07370
CleRt_RS07375	CleRT_14400		CleRt_RS07375	1573131	1574156	-	L-threonine 3-dehydrogenase		gene	gene1579	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07375
CleRt_RS07380	CleRT_14410		CleRt_RS07380	1574162	1575352	-	glycine C-acetyltransferase		gene	gene1580	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07380
CleRt_RS07385	CleRT_14430		CleRt_RS07385	1576146	1576463	-	hypothetical protein		gene	gene1581	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07385
CleRt_RS07390	CleRT_14440		CleRt_RS07390	1576529	1576978	-	hypothetical protein		gene	gene1582	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07390
CleRt_RS07395	CleRt_RS07395		CleRt_RS07395	1577572	1577796	-	hypothetical protein		gene	gene1583	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07395
CleRt_RS07400	CleRt_RS07400		CleRt_RS07400	1578930	1579118	-	hypothetical protein		gene	gene1584	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07400
CleRt_RS07410	CleRT_14460		CleRt_RS07410	1580483	1581140	-	methionine ABC transporter permease	frameshifted%3B internal stop	pseudogene	gene1587	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07410
CleRt_RS07420	CleRT_14480		CleRt_RS07420	1582116	1583558	+	peptidase M20		gene	gene1589	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07420
CleRt_RS07430	CleRT_14520		CleRt_RS07430	1586288	1586767	-	phosphohistidine phosphatase SixA		gene	gene1591	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07430
CleRt_RS07435	CleRT_t048		CleRt_RS07435	1587235	1587310	+	tRNA-Glu		tRNA	gene1592	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07435
CleRt_RS07440	CleRt_RS07440		CleRt_RS07440	1589266	1589451	-	hypothetical protein		gene	gene1593	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07440
CleRt_RS07445	CleRT_14570		CleRt_RS07445	1590138	1590977	-	nicotinate-nucleotide diphosphorylase (carboxylating)	frameshifted%3B internal stop	pseudogene	gene1594	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07445
CleRt_RS07450	CleRT_14590		CleRt_RS07450	1590974	1591738	-	CDP-diacylglycerol--serine O-phosphatidyltransferase		gene	gene1595	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07450
CleRt_RS07455	CleRT_14600		CleRt_RS07455	1591829	1592107	+	DUF3579 domain-containing protein		gene	gene1596	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07455
CleRt_RS07460	CleRT_14610		CleRt_RS07460	1592108	1593280	+	cardiolipin synthase B		gene	gene1597	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07460
CleRt_RS07470	CleRT_14630		CleRt_RS07470	1594155	1596734	-	ATP-dependent chaperone ClpB		gene	gene1599	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07470
CleRt_RS07475	CleRt_RS07475		CleRt_RS07475	1596983	1597270	+	hypothetical protein		gene	gene1600	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07475
CleRt_RS07480	CleRT_14650		CleRt_RS07480	1597476	1598092	-	7-carboxy-7-deazaguanine synthase QueE	frameshifted%3B internal stop	pseudogene	gene1601	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07480
CleRt_RS07485	CleRT_14660		CleRt_RS07485	1598089	1599006	-	tol-pal system protein YbgF		gene	gene1602	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07485
CleRt_RS07490	CleRT_14670		CleRt_RS07490	1599009	1599599	-	peptidoglycan-binding protein		gene	gene1603	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07490
CleRt_RS07495	CleRT_14680		CleRt_RS07495	1599629	1600933	-	Tol-Pal system beta propeller repeat protein TolB		gene	gene1604	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07495
CleRt_RS07500	CleRT_14690		CleRt_RS07500	1601002	1601811	-	cell envelope integrity protein TolA		gene	gene1605	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07500
CleRt_RS07505	CleRT_14700		CleRt_RS07505	1601841	1603859	-	phosphoglycerol transferase	frameshifted%3B internal stop	pseudogene	gene1606	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07505
CleRt_RS07515	CleRT_14720		CleRt_RS07515	1605798	1607510	-	proline--tRNA ligase		gene	gene1608	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07515
CleRt_RS07520	CleRT_14730		CleRt_RS07520	1608452	1609672	-	ubiquinone biosynthesis protein UbiH		gene	gene1609	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07520
CleRt_RS07525	CleRT_14740		CleRt_RS07525	1609669	1610904	-	2-octaprenyl-6-methoxyphenyl hydroxylase		gene	gene1610	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07525
CleRt_RS07530	CleRT_14750		CleRt_RS07530	1610997	1612823	+	aminopeptidase P family protein		gene	gene1611	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07530
CleRt_RS07535	CleRT_14760		CleRt_RS07535	1612930	1613142	+	TIGR02449 family protein		gene	gene1612	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07535
CleRt_RS07540	CleRT_14770		CleRt_RS07540	1613139	1613459	+	cell division protein ZapA		gene	gene1613	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07540
CleRt_RS07545	CleRT_14780		CleRt_RS07545	1613664	1614254	+	5-formyltetrahydrofolate cyclo-ligase		gene	gene1614	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07545
CleRt_RS07550	CleRT_14790		CleRt_RS07550	1614265	1614699	-	EVE domain-containing protein	frameshifted	pseudogene	gene1615	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07550
CleRt_RS07555	CleRT_14800		CleRt_RS07555	1614700	1615041	-	hypothetical protein	frameshifted	pseudogene	gene1616	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07555
CleRt_RS07560	CleRT_14810		CleRt_RS07560	1615114	1615491	-	sulfurtransferase		gene	gene1617	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07560
CleRt_RS07565	CleRT_14820		CleRt_RS07565	1615505	1617421	-	DNA topoisomerase IV subunit B		gene	gene1618	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07565
CleRt_RS07570	CleRT_14830		CleRt_RS07570	1617568	1618881	+	3-deoxy-D-manno-octulosonic acid transferase		gene	gene1619	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07570
CleRt_RS07575	CleRT_14840		CleRt_RS07575	1619034	1620794	-	channel protein TolC	internal stop	pseudogene	gene1620	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07575
CleRt_RS07580	CleRT_14850		CleRt_RS07580	1620918	1621781	-	4-hydroxybenzoate octaprenyltransferase		gene	gene1621	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07580
CleRt_RS07585	CleRt_RS07585		CleRt_RS07585	1622041	1622259	-	hypothetical protein		gene	gene1623	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07585
CleRt_RS07595	CleRT_14880		CleRt_RS07595	1623385	1623681	+	hypothetical protein		gene	gene1625	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07595
CleRt_RS07600	CleRT_14890		CleRt_RS07600	1623778	1624333	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1626	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07600
CleRt_RS07605	CleRt_RS07605		CleRt_RS07605	1624732	1624914	-	hypothetical protein		gene	gene1627	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07605
CleRt_RS07610	CleRt_RS07610		CleRt_RS07610	1625408	1625587	-	hypothetical protein		gene	gene1629	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07610
CleRt_RS07615	CleRt_RS07615		CleRt_RS07615	1626256	1626450	+	hypothetical protein		gene	gene1630	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07615
CleRt_RS07620	CleRt_RS07620		CleRt_RS07620	1628485	1628733	+	hypothetical protein		gene	gene1632	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07620
CleRt_RS07625	CleRt_RS07625		CleRt_RS07625	1630174	1630455	+	hypothetical protein		gene	gene1633	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07625
CleRt_RS07630	CleRt_RS07630		CleRt_RS07630	1631942	1632295	+	hypothetical protein		gene	gene1634	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07630
CleRt_RS07635	CleRt_RS07635		CleRt_RS07635	1633963	1634163	+	hypothetical protein		gene	gene1635	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07635
CleRt_RS07645	CleRT_14970		CleRt_RS07645	1635554	1636367	+	multidrug ABC transporter ATP-binding protein	frameshifted	pseudogene	gene1637	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07645
CleRt_RS07650	CleRT_14990		CleRt_RS07650	1636451	1637436	+	mannose-1-phosphate guanyltransferase	frameshifted%3B internal stop	pseudogene	gene1638	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07650
CleRt_RS07665	CleRT_15020		CleRt_RS07665	1639141	1639743	-	non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family		gene	gene1641	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07665
CleRt_RS07670	CleRT_15030		CleRt_RS07670	1640106	1641138	-	ferrochelatase	frameshifted%3B internal stop	pseudogene	gene1642	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07670
CleRt_RS07675	CleRT_15040		CleRt_RS07675	1641149	1641982	-	peptide chain release factor N(5)-glutamine methyltransferase		gene	gene1643	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07675
CleRt_RS07680	CleRT_15050		CleRt_RS07680	1642002	1643087	-	peptide chain release factor 1		gene	gene1644	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07680
CleRt_RS07685	CleRt_RS07685		CleRt_RS07685	1643315	1643509	-	hypothetical protein		gene	gene1646	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07685
CleRt_RS07690	CleRT_15070		CleRt_RS07690	1643787	1644170	-	dihydroneopterin aldolase		gene	gene1647	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07690
CleRt_RS07695	CleRT_15080		CleRt_RS07695	1644163	1644612	-	RNA polymerase-binding protein DksA		gene	gene1648	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07695
CleRt_RS07700	CleRT_15090		CleRt_RS07700	1644744	1645574	-	diaminopimelate epimerase		gene	gene1649	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07700
CleRt_RS07705	CleRT_15100		CleRt_RS07705	1645774	1646445	+	carboxylesterase		gene	gene1650	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07705
CleRt_RS07710	CleRT_15110		CleRt_RS07710	1646425	1647041	-	mannose-1-phosphate guanylyltransferase	frameshifted%3B internal stop	pseudogene	gene1651	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07710
CleRt_RS07715	CleRT_15120		CleRt_RS07715	1647076	1647963	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1652	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07715
CleRt_RS07720	CleRT_15130		CleRt_RS07720	1648067	1650676	+	LPS-assembly protein LptD		gene	gene1653	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07720
CleRt_RS07725	CleRT_15140		CleRt_RS07725	1650682	1651650	+	peptidylprolyl isomerase		gene	gene1654	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07725
CleRt_RS07730	CleRT_15150		CleRt_RS07730	1651650	1652573	+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA		gene	gene1655	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07730
CleRt_RS07735	CleRT_15160		CleRt_RS07735	1652570	1653358	+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA		gene	gene1656	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07735
CleRt_RS07745	CleRT_15200		CleRt_RS07745	1655059	1655994	+	S49 family peptidase		gene	gene1659	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07745
CleRt_RS07750	CleRT_15210		CleRt_RS07750	1656007	1656831	+	symmetrical bis(5'-nucleosyl)-tetraphosphatase		gene	gene1660	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07750
CleRt_RS07755	CleRT_15230		CleRt_RS07755	1657345	1657848	-	type 3 dihydrofolate reductase		gene	gene1663	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07755
CleRt_RS07760	CleRT_15240		CleRt_RS07760	1657859	1658355	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1664	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07760
CleRt_RS07770	CleRT_15260		CleRt_RS07770	1659014	1659562	-	D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase		gene	gene1666	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07770
CleRt_RS07775	CleRT_15270		CleRt_RS07775	1659595	1660536	-	methionyl-tRNA formyltransferase		gene	gene1667	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07775
CleRt_RS07780	CleRT_15290		CleRt_RS07780	1661609	1662085	+	DUF494 domain-containing protein		gene	gene1669	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07780
CleRt_RS07785	CleRT_15300		CleRt_RS07785	1662089	1664392	+	DNA topoisomerase I		gene	gene1670	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07785
CleRt_RS07790	CleRT_15320		CleRt_RS07790	1664886	1665449	+	threonylcarbamoyl-AMP synthase		gene	gene1672	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07790
CleRt_RS07795	CleRT_15330		CleRt_RS07795	1665495	1666559	-	lipopolysaccharide heptosyltransferase family protein		gene	gene1673	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07795
CleRt_RS07800	CleRT_15340		CleRt_RS07800	1666571	1667833	-	two-component sensor histidine kinase	frameshifted	pseudogene	gene1674	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07800
CleRt_RS07805	CleRT_15350		CleRt_RS07805	1667833	1668571	-	DNA-binding response regulator	frameshifted%3B internal stop	pseudogene	gene1675	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07805
CleRt_RS07810	CleRt_RS07810		CleRt_RS07810	1668700	1668969	-	hypothetical protein		gene	gene1676	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07810
CleRt_RS07815	CleRt_RS07815		CleRt_RS07815	1669678	1669935	+	hypothetical protein		gene	gene1677	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07815
CleRt_RS07820	CleRT_15370		CleRt_RS07820	1669968	1671722	+	arginine--tRNA ligase		gene	gene1678	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07820
CleRt_RS07825	CleRt_RS07825		CleRt_RS07825	1672756	1672956	+	hypothetical protein		gene	gene1679	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07825
CleRt_RS07830	CleRt_RS07830		CleRt_RS07830	1673093	1673284	-	hypothetical protein		gene	gene1680	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07830
CleRt_RS07835	CleRT_15400		CleRt_RS07835	1673725	1674270	+	ATP-dependent protease subunit HslV		gene	gene1681	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07835
CleRt_RS07840	CleRT_15410		CleRt_RS07840	1674346	1675695	+	ATP-dependent protease ATPase subunit HslU		gene	gene1682	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07840
CleRt_RS07850	CleRt_RS07850		CleRt_RS07850	1676919	1677209	+	hypothetical protein		gene	gene1685	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07850
CleRt_RS07855	CleRt_RS07855		CleRt_RS07855	1677406	1677612	+	hypothetical protein		gene	gene1686	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07855
CleRt_RS07860	CleRT_15440		CleRt_RS07860	1678558	1679307	+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE		gene	gene1687	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07860
CleRt_RS07865	CleRT_15450		CleRt_RS07865	1679307	1679921	+	hypothetical protein		gene	gene1688	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07865
CleRt_RS07870	CleRT_15460		CleRt_RS07870	1679918	1681540	+	ubiquinone biosynthesis regulatory protein kinase UbiB		gene	gene1689	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07870
CleRt_RS07885	CleRT_15490		CleRt_RS07885	1683691	1683936	-	hypothetical protein		gene	gene1694	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07885
CleRt_RS07890	CleRT_15500		CleRt_RS07890	1684143	1685037	+	cystathionine beta-lyase	frameshifted%3B internal stop	pseudogene	gene1695	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07890
CleRt_RS07895	CleRT_15510		CleRt_RS07895	1685072	1686207	+	cystathionine beta-lyase	frameshifted%3B internal stop	pseudogene	gene1696	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07895
CleRt_RS07900	CleRT_15520		CleRt_RS07900	1686292	1686942	-	SH3 domain-containing protein		gene	gene1697	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07900
CleRt_RS07905	CleRt_RS07905		CleRt_RS07905	1687486	1687707	-	hypothetical protein		gene	gene1698	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07905
CleRt_RS07910	CleRt_RS07910		CleRt_RS07910	1687709	1687891	-	hypothetical protein		gene	gene1699	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07910
CleRt_RS07915	CleRT_15550		CleRt_RS07915	1688592	1689782	+	methionine adenosyltransferase		gene	gene1700	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07915
CleRt_RS07920	CleRT_15560		CleRt_RS07920	1689809	1691104	+	adenosylhomocysteinase		gene	gene1701	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07920
CleRt_RS07925	CleRT_15570		CleRt_RS07925	1691111	1692063	+	sensor domain-containing diguanylate cyclase	frameshifted%3B internal stop	pseudogene	gene1702	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07925
CleRt_RS07930	CleRt_RS07930		CleRt_RS07930	1692410	1692592	-	hypothetical protein		gene	gene1703	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07930
CleRt_RS07935	CleRt_RS07935		CleRt_RS07935	1692793	1692984	+	hypothetical protein		gene	gene1704	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07935
CleRt_RS07940	CleRt_RS07940		CleRt_RS07940	1694015	1694269	+	hypothetical protein		gene	gene1706	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07940
CleRt_RS07945	CleRT_15600		CleRt_RS07945	1696842	1698179	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1709	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07945
CleRt_RS07950	CleRT_15620		CleRt_RS07950	1698959	1699756	-	methylenetetrahydrofolate reductase [NAD(P)H]	frameshifted	pseudogene	gene1711	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07950
CleRt_RS07955	CleRT_15630		CleRt_RS07955	1699843	1702026	-	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	frameshifted%3B internal stop	pseudogene	gene1712	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07955
CleRt_RS07960	CleRT_15640		CleRt_RS07960	1702335	1703408	-	tryptophan--tRNA ligase		gene	gene1713	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07960
CleRt_RS07965	CleRT_15650		CleRt_RS07965	1703465	1705648	+	DNA helicase II		gene	gene1714	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07965
CleRt_RS07970	CleRT_15660		CleRt_RS07970	1705645	1706378	+	zinc transporter	frameshifted%3B internal stop	pseudogene	gene1715	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07970
CleRt_RS07975	CleRt_RS07975		CleRt_RS07975	1707116	1707628	-	hypothetical protein		gene	gene1717	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07975
CleRt_RS07980	CleRt_RS07980		CleRt_RS07980	1707969	1708151	-	hypothetical protein		gene	gene1718	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07980
CleRt_RS07985	CleRt_RS07985		CleRt_RS07985	1708338	1708571	-	hypothetical protein		gene	gene1719	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07985
CleRt_RS07990	CleRt_RS07990		CleRt_RS07990	1708836	1709021	+	hypothetical protein		gene	gene1720	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07990
CleRt_RS07995	CleRT_15690		CleRt_RS07995	1709173	1710489	-	MFS transporter		gene	gene1721	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS07995
CleRt_RS08000	CleRT_15700		CleRt_RS08000	1710511	1711854	-	MFS transporter	frameshifted	pseudogene	gene1722	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08000
CleRt_RS08005	CleRT_15710		CleRt_RS08005	1712089	1712910	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1723	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08005
CleRt_RS08010	CleRt_RS08010		CleRt_RS08010	1712954	1713148	+	hypothetical protein		gene	gene1724	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08010
CleRt_RS08015	CleRT_15720		CleRt_RS08015	1713145	1713384	-	hypothetical protein		gene	gene1725	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08015
CleRt_RS08020	CleRT_15730		CleRt_RS08020	1713519	1714103	-	thymidine kinase	frameshifted	pseudogene	gene1726	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08020
CleRt_RS08025	CleRT_15750		CleRt_RS08025	1715755	1716232	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1727	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08025
CleRt_RS08030	CleRT_15760		CleRt_RS08030	1716250	1717140	+	acyltransferase		gene	gene1728	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08030
CleRt_RS08035	CleRT_15770		CleRt_RS08035	1717140	1718079	+	hydroxymethylbilane synthase	frameshifted%3B internal stop	pseudogene	gene1729	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08035
CleRt_RS08040	CleRT_15780		CleRt_RS08040	1718073	1718759	+	type I 3-dehydroquinate dehydratase		gene	gene1730	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08040
CleRt_RS08045	CleRT_15790		CleRt_RS08045	1718824	1719165	+	NGG1p interacting factor 3 protein%2C NIF3		gene	gene1731	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08045
CleRt_RS08050	CleRT_15810		CleRt_RS08050	1719947	1720903	+	hypothetical protein		gene	gene1732	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08050
CleRt_RS08055	CleRT_15820		CleRt_RS08055	1720900	1722078	+	heme biosynthesis protein HemY		gene	gene1733	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08055
CleRt_RS08060	CleRT_15830		CleRt_RS08060	1722088	1722880	+	hypothetical protein	frameshifted	pseudogene	gene1734	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08060
CleRt_RS08065	CleRT_15840		CleRt_RS08065	1722987	1723193	-	hypothetical protein		gene	gene1735	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08065
CleRt_RS08070	CleRT_15850		CleRt_RS08070	1723787	1725043	-	transcription termination factor Rho		gene	gene1736	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08070
CleRt_RS08075	CleRT_15860		CleRt_RS08075	1725225	1725560	-	thioredoxin TrxA		gene	gene1737	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08075
CleRt_RS08080	CleRT_15870		CleRt_RS08080	1725617	1726189	-	YggT family protein		gene	gene1738	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08080
CleRt_RS08085	CleRt_RS08085		CleRt_RS08085	1727068	1727259	-	hypothetical protein		gene	gene1739	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08085
CleRt_RS08090	CleRT_15890		CleRt_RS08090	1727523	1728353	-	pyrroline-5-carboxylate reductase		gene	gene1740	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08090
CleRt_RS08095	CleRT_15900		CleRt_RS08095	1728399	1729079	-	YggS family pyridoxal phosphate-dependent enzyme		gene	gene1741	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08095
CleRt_RS08100	CleRT_15910		CleRt_RS08100	1729106	1730656	-	phosphoenolpyruvate carboxykinase		gene	gene1742	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08100
CleRt_RS08105	CleRT_15920		CleRt_RS08105	1730761	1731312	+	YqgE/AlgH family protein		gene	gene1743	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08105
CleRt_RS08110	CleRT_15930		CleRt_RS08110	1731342	1731797	+	Holliday junction resolvase RuvX		gene	gene1744	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08110
CleRt_RS08115	CleRT_15940		CleRt_RS08115	1731790	1732740	+	aspartate carbamoyltransferase catalytic subunit		gene	gene1745	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08115
CleRt_RS08135	CleRt_RS08135		CleRt_RS08135	49797	50021	+	hypothetical protein		gene	gene49	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08135
CleRt_RS08140	CleRt_RS08140		CleRt_RS08140	50200	50652	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene50	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08140
CleRt_RS08145	CleRt_RS08145		CleRt_RS08145	75708	76227	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene79	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08145
CleRt_RS08160	CleRt_RS08160		CleRt_RS08160	168225	168548	+	hypothetical protein		gene	gene173	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08160
CleRt_RS08165	CleRt_RS08165		CleRt_RS08165	229232	229732	+	hypothetical protein		gene	gene240	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08165
CleRt_RS08170	CleRt_RS08170		CleRt_RS08170	257040	257306	+	hypothetical protein		gene	gene273	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08170
CleRt_RS08175	CleRt_RS08175		CleRt_RS08175	257335	257652	+	hypothetical protein		gene	gene274	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08175
CleRt_RS08180	CleRt_RS08180		CleRt_RS08180	258165	258467	+	hypothetical protein		gene	gene275	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08180
CleRt_RS08185	CleRT_02490		CleRt_RS08185	263117	263504	-	LuxR family transcriptional regulator	frameshifted%3B internal stop	pseudogene	gene280	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08185
CleRt_RS08190	CleRT_02580		CleRt_RS08190	270487	271542	+	type IV secretion protein IcmK	frameshifted%3B internal stop	pseudogene	gene288	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08190
CleRt_RS08195	CleRT_03540		CleRt_RS08195	374438	378034	+	DUF3971 domain-containing protein		gene	gene390	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08195
CleRt_RS08200	CleRt_RS08200		CleRt_RS08200	405560	405772	-	DUF962 domain-containing protein		gene	gene420	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08200
CleRt_RS08205	CleRt_RS08205		CleRt_RS08205	429426	429674	+	hypothetical protein		gene	gene445	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08205
CleRt_RS08210	CleRt_RS08210		CleRt_RS08210	443637	443990	+	hypothetical protein		gene	gene460	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08210
CleRt_RS08215	CleRt_RS08215		CleRt_RS08215	453155	453382	-	hypothetical protein		gene	gene469	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08215
CleRt_RS08220	CleRt_RS08220		CleRt_RS08220	453388	453738	-	hypothetical protein		gene	gene470	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08220
CleRt_RS08225	CleRt_RS08225		CleRt_RS08225	454110	454292	-	hypothetical protein		gene	gene472	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08225
CleRt_RS08235	CleRT_04870		CleRt_RS08235	524613	525402	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene542	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08235
CleRt_RS08240	CleRt_RS08240		CleRt_RS08240	528454	528672	+	hypothetical protein		gene	gene546	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08240
CleRt_RS08255	CleRt_RS08255		CleRt_RS08255	561433	561618	-	hypothetical protein		gene	gene585	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08255
CleRt_RS08260	CleRt_RS08260		CleRt_RS08260	562407	562670	-	hypothetical protein		gene	gene586	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08260
CleRt_RS08265	CleRt_RS08265		CleRt_RS08265	600634	600861	-	hypothetical protein		gene	gene630	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08265
CleRt_RS08270	CleRt_RS08270		CleRt_RS08270	600867	601217	-	hypothetical protein		gene	gene631	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08270
CleRt_RS08275	CleRt_RS08275		CleRt_RS08275	601589	601771	-	hypothetical protein		gene	gene633	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08275
CleRt_RS08285	CleRT_06310		CleRt_RS08285	672092	672881	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene703	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08285
CleRt_RS08290	CleRt_RS08290		CleRt_RS08290	675933	676151	+	hypothetical protein		gene	gene707	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08290
CleRt_RS08305	CleRt_RS08305		CleRt_RS08305	708912	709097	-	hypothetical protein		gene	gene746	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08305
CleRt_RS08310	CleRt_RS08310		CleRt_RS08310	709886	710149	-	hypothetical protein		gene	gene747	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08310
CleRt_RS08315	CleRt_RS08315		CleRt_RS08315	738680	738922	+	hypothetical protein		gene	gene782	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08315
CleRt_RS08320	CleRt_RS08320		CleRt_RS08320	850765	851088	+	hypothetical protein		gene	gene883	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08320
CleRt_RS08325	CleRt_RS08325		CleRt_RS08325	851123	851416	+	hypothetical protein		gene	gene884	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08325
CleRt_RS08355	CleRt_RS08355		CleRt_RS08355	931273	931602	+	hypothetical protein		gene	gene961	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08355
CleRt_RS08365	CleRt_RS08365		CleRt_RS08365	952363	952641	-	hypothetical protein		gene	gene983	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08365
CleRt_RS08370	CleRt_RS08370		CleRt_RS08370	983072	983365	+	hypothetical protein		gene	gene1014	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08370
CleRt_RS08375	CleRt_RS08375		CleRt_RS08375	983602	983820	+	hypothetical protein		gene	gene1015	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08375
CleRt_RS08380	CleRt_RS08380		CleRt_RS08380	984043	984324	+	hypothetical protein		gene	gene1016	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08380
CleRt_RS08385	CleRt_RS08385		CleRt_RS08385	992166	992621	-	hypothetical protein		gene	gene1023	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08385
CleRt_RS08390	CleRt_RS08390		CleRt_RS08390	1019027	1019230	-	hypothetical protein		gene	gene1047	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08390
CleRt_RS08395	CleRt_RS08395		CleRt_RS08395	1024057	1024353	+	hypothetical protein		gene	gene1049	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08395
CleRt_RS08400	CleRt_RS08400		CleRt_RS08400	1229233	1229661	+	hypothetical protein		gene	gene1236	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08400
CleRt_RS08405	CleRt_RS08405		CleRt_RS08405	1230891	1231202	+	hypothetical protein		gene	gene1237	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08405
CleRt_RS08420	CleRt_RS08420		CleRt_RS08420	1283376	1283567	-	hypothetical protein		gene	gene1291	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08420
CleRt_RS08450	CleRt_RS08450		CleRt_RS08450	1481161	1481436	-	hypothetical protein		gene	gene1500	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08450
CleRt_RS08455	CleRt_RS08455		CleRt_RS08455	1481503	1481733	+	hypothetical protein		gene	gene1501	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08455
CleRt_RS08490	CleRt_RS08490		CleRt_RS08490	1622959	1623162	-	hypothetical protein		gene	gene1624	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08490
CleRt_RS08495	CleRt_RS08495		CleRt_RS08495	1634573	1634833	+	hypothetical protein		gene	gene1636	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08495
CleRt_RS08505	CleRt_RS08505		CleRt_RS08505	1654663	1655040	+	hypothetical protein		gene	gene1658	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08505
CleRt_RS08510	CleRt_RS08510		CleRt_RS08510	1675935	1676135	-	hypothetical protein		gene	gene1683	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08510
CleRt_RS08515	CleRt_RS08515		CleRt_RS08515	1676467	1676670	-	hypothetical protein		gene	gene1684	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08515
CleRt_RS08520	CleRt_RS08520		CleRt_RS08520	1682507	1683001	-	hypothetical protein		gene	gene1691	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08520
CleRt_RS08525	CleRt_RS08525		CleRt_RS08525	1683029	1683352	-	hypothetical protein		gene	gene1692	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08525
CleRt_RS08530	CleRt_RS08530	rnpB	rnpB	1579255	1579600	-	RNase P RNA component class A		gene	gene1585	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08530
CleRt_RS08535	CleRT_00080		CleRt_RS08535	10538	10988	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene7	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08535
CleRt_RS08540	CleRT_00110		CleRt_RS08540	12122	13295	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene10	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08540
CleRt_RS08545	CleRt_RS08545		CleRt_RS08545	22151	22243	+	hypothetical protein		gene	gene18	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08545
CleRt_RS08550	CleRt_RS08550		CleRt_RS08550	22259	22447	+	hypothetical protein		gene	gene19	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08550
CleRt_RS08555	CleRt_RS08555		CleRt_RS08555	29629	29811	+	hypothetical protein		gene	gene27	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08555
CleRt_RS08560	CleRT_00300		CleRt_RS08560	31751	34038	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene30	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08560
CleRt_RS08565	CleRT_00500		CleRt_RS08565	54287	55297	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene53	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08565
CleRt_RS08570	CleRt_RS08570		CleRt_RS08570	58119	58265	-	hypothetical protein		gene	gene57	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08570
CleRt_RS08575	CleRt_RS08575		CleRt_RS08575	58247	58357	-	hypothetical protein		gene	gene58	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08575
CleRt_RS08580	CleRt_RS08580		CleRt_RS08580	58370	58603	-	hypothetical protein		gene	gene59	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08580
CleRt_RS08585	CleRT_00550		CleRt_RS08585	59111	59323	+	acyl carrier protein	internal stop	pseudogene	gene60	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08585
CleRt_RS08590	CleRt_RS08590		CleRt_RS08590	64192	64416	-	hypothetical protein		gene	gene63	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08590
CleRt_RS08595	CleRt_RS08595		CleRt_RS08595	64413	64625	-	hypothetical protein		gene	gene64	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08595
CleRt_RS08600	CleRt_RS08600		CleRt_RS08600	66389	66652	-	hypothetical protein		gene	gene66	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08600
CleRt_RS08605	CleRt_RS08605		CleRt_RS08605	66656	67086	+	hypothetical protein	frameshifted	pseudogene	gene67	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08605
CleRt_RS08610	CleRT_00760		CleRt_RS08610	79598	80161	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene84	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08610
CleRt_RS08615	CleRt_RS08615		CleRt_RS08615	85186	85524	-	hypothetical protein		gene	gene88	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08615
CleRt_RS08620	CleRt_RS08620		CleRt_RS08620	91891	92037	-	hypothetical protein		gene	gene94	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08620
CleRt_RS08625	CleRt_RS08625		CleRt_RS08625	92118	92294	-	hypothetical protein		gene	gene95	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08625
CleRt_RS08630	CleRT_01010		CleRt_RS08630	105414	106278	+	peptide ABC transporter permease	frameshifted%3B internal stop	pseudogene	gene108	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08630
CleRt_RS08635	CleRT_01030		CleRt_RS08635	107632	108972	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene109	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08635
CleRt_RS08640	CleRt_RS08640		CleRt_RS08640	111700	111897	-	hypothetical protein		gene	gene111	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08640
CleRt_RS08645	CleRt_RS08645		CleRt_RS08645	112009	112173	-	hypothetical protein		gene	gene112	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08645
CleRt_RS08650	CleRt_RS08650		CleRt_RS08650	112356	112565	-	hypothetical protein		gene	gene113	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08650
CleRt_RS08655	CleRT_01080		CleRt_RS08655	112598	113143	-	dTDP-4-dehydrorhamnose 3%2C5-epimerase	frameshifted%3B internal stop	pseudogene	gene114	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08655
CleRt_RS08660	CleRt_RS08660		CleRt_RS08660	118360	118542	-	hypothetical protein		gene	gene118	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08660
CleRt_RS08665	CleRt_RS08665		CleRt_RS08665	126133	126429	-	methyltransferase domain-containing protein		gene	gene131	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08665
CleRt_RS08670	CleRT_01360		CleRt_RS08670	142240	143203	+	ABC transporter substrate-binding protein	frameshifted	pseudogene	gene147	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08670
CleRt_RS08675	CleRT_01370		CleRt_RS08675	143246	144165	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene148	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08675
CleRt_RS08680	CleRt_RS08680		CleRt_RS08680	166548	166769	+	hypothetical protein		gene	gene169	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08680
CleRt_RS08685	CleRt_RS08685		CleRt_RS08685	167779	167952	+	hypothetical protein		gene	gene172	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08685
CleRt_RS08690	CleRt_RS08690		CleRt_RS08690	169363	169773	+	hypothetical protein		gene	gene174	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08690
CleRt_RS08695	CleRt_RS08695		CleRt_RS08695	170746	170880	+	hypothetical protein		gene	gene176	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08695
CleRt_RS08700	CleRt_RS08700		CleRt_RS08700	174220	174405	-	hypothetical protein	frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start	pseudogene	gene183	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08700
CleRt_RS08705	CleRT_01730		CleRt_RS08705	187776	188173	-	hypothetical protein	frameshifted	pseudogene	gene195	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08705
CleRt_RS08710	CleRT_01810		CleRt_RS08710	192381	192744	-	YraN family protein	frameshifted%3B internal stop	pseudogene	gene203	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08710
CleRt_RS08715	CleRT_01850		CleRt_RS08715	195268	195946	-	phosphoribosylglycinamide formyltransferase	frameshifted%3B internal stop	pseudogene	gene207	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08715
CleRt_RS08720	CleRt_RS08720		CleRt_RS08720	210512	211560	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene222	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08720
CleRt_RS08725	CleRt_RS08725		CleRt_RS08725	211779	211982	-	hypothetical protein		gene	gene223	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08725
CleRt_RS08730	CleRt_RS08730		CleRt_RS08730	244137	244350	-	hypothetical protein	frameshifted	pseudogene	gene257	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08730
CleRt_RS08735	CleRT_02370		CleRt_RS08735	250107	250532	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene265	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08735
CleRt_RS08740	CleRT_02590		CleRt_RS08740	271529	273381	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene289	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08740
CleRt_RS08745	CleRT_02610		CleRt_RS08745	274243	274737	+	hypothetical protein	frameshifted	pseudogene	gene291	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08745
CleRt_RS08750	CleRt_RS08750		CleRt_RS08750	282069	282257	-	hypothetical protein		gene	gene298	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08750
CleRt_RS08755	CleRt_RS08755		CleRt_RS08755	288713	288922	+	hypothetical protein		gene	gene303	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08755
CleRt_RS08760	CleRT_02730		CleRt_RS08760	290229	291289	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene306	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08760
CleRt_RS08765	CleRt_RS08765		CleRt_RS08765	295654	295770	-	hypothetical protein		gene	gene309	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08765
CleRt_RS08770	CleRT_02940		CleRt_RS08770	312540	313184	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene330	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08770
CleRt_RS08775	CleRt_RS08775		CleRt_RS08775	345405	345763	+	hypothetical protein	frameshifted	pseudogene	gene361	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08775
CleRt_RS08780	CleRt_RS08780		CleRt_RS08780	345887	346529	+	haloacid dehalogenase	frameshifted	pseudogene	gene362	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08780
CleRt_RS08785	CleRT_03230		CleRt_RS08785	346628	347045	+	thioesterase	frameshifted%3B internal stop	pseudogene	gene363	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08785
CleRt_RS08790	CleRT_03360		CleRt_RS08790	359350	360439	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene375	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08790
CleRt_RS08795	CleRt_RS08795		CleRt_RS08795	361734	362120	+	hypothetical protein		gene	gene377	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08795
CleRt_RS08800	CleRt_RS08800		CleRt_RS08800	362123	362416	+	hypothetical protein		gene	gene378	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08800
CleRt_RS08805	CleRt_RS08805		CleRt_RS08805	445827	446039	-	hypothetical protein		gene	gene463	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08805
CleRt_RS08810	CleRt_RS08810		CleRt_RS08810	453716	453787	-	hypothetical protein		gene	gene471	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08810
CleRt_RS08815	CleRt_RS08815	ffs	ffs	486292	486386	-	signal recognition particle sRNA small type		gene	gene501	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08815
CleRt_RS08820	CleRT_04680		CleRt_RS08820	502641	503180	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene518	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08820
CleRt_RS08825	CleRt_RS08825		CleRt_RS08825	504169	504387	+	hypothetical protein		gene	gene520	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08825
CleRt_RS08830	CleRt_RS08830		CleRt_RS08830	507143	507298	+	hypothetical protein		gene	gene523	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08830
CleRt_RS08835	CleRT_04760		CleRt_RS08835	513644	514044	-	glyoxalase	frameshifted%3B internal stop	pseudogene	gene529	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08835
CleRt_RS08840	CleRT_04910		CleRt_RS08840	527732	528167	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene545	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08840
CleRt_RS08845	CleRT_05160		CleRt_RS08845	547729	548613	-	quinol oxidase	frameshifted%3B internal stop	pseudogene	gene569	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08845
CleRt_RS08850	CleRT_05170		CleRt_RS08850	548870	550290	-	multidrug transporter AcrB	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene570	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08850
CleRt_RS08855	CleRT_05250		CleRt_RS08855	556167	556786	+	transcriptional regulator	frameshifted%3B internal stop	pseudogene	gene577	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08855
CleRt_RS08860	CleRt_RS08860		CleRt_RS08860	558004	558201	+	hypothetical protein		gene	gene579	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08860
CleRt_RS08865	CleRt_RS08865		CleRt_RS08865	559049	559228	+	DUF1974 domain-containing protein		gene	gene581	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08865
CleRt_RS08870	CleRt_RS08870		CleRt_RS08870	588260	588376	-	hypothetical protein		gene	gene617	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08870
CleRt_RS08875	CleRT_05590		CleRt_RS08875	589536	589752	-	hypothetical protein	frameshifted	pseudogene	gene618	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08875
CleRt_RS08880	CleRT_05600		CleRt_RS08880	589928	590101	+	hypothetical protein		gene	gene619	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08880
CleRt_RS08885	CleRt_RS08885		CleRt_RS08885	593306	593518	-	hypothetical protein		gene	gene624	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08885
CleRt_RS08890	CleRt_RS08890		CleRt_RS08890	601195	601266	-	hypothetical protein		gene	gene632	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08890
CleRt_RS08895	CleRt_RS08895	ffs	ffs	633771	633865	-	signal recognition particle sRNA small type		gene	gene662	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08895
CleRt_RS08900	CleRT_06120		CleRt_RS08900	650120	650659	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene679	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08900
CleRt_RS08905	CleRt_RS08905		CleRt_RS08905	651648	651866	+	hypothetical protein		gene	gene681	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08905
CleRt_RS08910	CleRt_RS08910		CleRt_RS08910	654622	654777	+	hypothetical protein		gene	gene684	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08910
CleRt_RS08915	CleRT_06200		CleRt_RS08915	661123	661523	-	glyoxalase	frameshifted%3B internal stop	pseudogene	gene690	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08915
CleRt_RS08920	CleRT_06350		CleRt_RS08920	675211	675646	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene706	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08920
CleRt_RS08925	CleRT_06600		CleRt_RS08925	695208	696092	-	quinol oxidase	frameshifted%3B internal stop	pseudogene	gene730	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08925
CleRt_RS08930	CleRT_06610		CleRt_RS08930	696349	697769	-	multidrug transporter AcrB	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene731	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08930
CleRt_RS08935	CleRT_06690		CleRt_RS08935	703646	704265	+	transcriptional regulator	frameshifted%3B internal stop	pseudogene	gene738	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08935
CleRt_RS08940	CleRt_RS08940		CleRt_RS08940	705483	705680	+	hypothetical protein		gene	gene740	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08940
CleRt_RS08945	CleRt_RS08945		CleRt_RS08945	706528	706707	+	DUF1974 domain-containing protein		gene	gene742	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08945
CleRt_RS08950	CleRt_RS08950		CleRt_RS08950	735739	735855	-	hypothetical protein		gene	gene778	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08950
CleRt_RS08955	CleRT_07030		CleRt_RS08955	737015	737231	-	hypothetical protein	frameshifted	pseudogene	gene779	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08955
CleRt_RS08960	CleRT_07040		CleRt_RS08960	737407	737580	+	hypothetical protein		gene	gene780	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08960
CleRt_RS08965	CleRt_RS08965		CleRt_RS08965	740786	740998	-	hypothetical protein		gene	gene785	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08965
CleRt_RS08970	CleRT_07110		CleRt_RS08970	745339	746018	+	serine/threonine protein phosphatase	frameshifted%3B internal stop	pseudogene	gene788	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08970
CleRt_RS08975	CleRT_07350		CleRt_RS08975	769216	769558	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene812	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08975
CleRt_RS08980	CleRT_07360		CleRt_RS08980	769652	769937	-	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene813	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08980
CleRt_RS08985	CleRT_07410		CleRt_RS08985	777355	777979	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene819	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08985
CleRt_RS08990	CleRT_07520		CleRt_RS08990	790413	790749	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene830	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08990
CleRt_RS08995	CleRT_07540		CleRt_RS08995	792549	793819	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene832	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS08995
CleRt_RS09000	CleRT_07600		CleRt_RS09000	803486	803848	+	cell division protein ZipA	frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start	pseudogene	gene840	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09000
CleRt_RS09005	CleRT_07830		CleRt_RS09005	832283	832691	+	acetyl-CoA acetyltransferase	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene866	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09005
CleRt_RS09010	CleRt_RS09010		CleRt_RS09010	834761	835099	+	hypothetical protein		gene	gene868	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09010
CleRt_RS09015	CleRt_RS09015		CleRt_RS09015	841140	841431	+	thiosulfate sulfurtransferase	frameshifted%3B internal stop	pseudogene	gene874	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09015
CleRt_RS09020	CleRT_07960		CleRt_RS09020	844899	845388	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene879	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09020
CleRt_RS09025	CleRT_08180		CleRt_RS09025	874566	875322	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene901	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09025
CleRt_RS09030	CleRT_08220		CleRt_RS09030	879749	879935	+	hypothetical protein	frameshifted	pseudogene	gene907	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09030
CleRt_RS09035	CleRt_RS09035		CleRt_RS09035	880171	880323	-	hypothetical protein		gene	gene908	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09035
CleRt_RS09040	CleRT_08240		CleRt_RS09040	880337	881301	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene909	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09040
CleRt_RS09045	CleRT_08280		CleRt_RS09045	886176	887682	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene913	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09045
CleRt_RS09050	CleRt_RS09050		CleRt_RS09050	915243	915383	-	hypothetical protein		gene	gene943	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09050
CleRt_RS09055	CleRT_08570		CleRt_RS09055	915820	916531	+	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene945	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09055
CleRt_RS09060	CleRT_08600		CleRt_RS09060	917879	918281	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene948	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09060
CleRt_RS09065	CleRT_08630		CleRt_RS09065	920343	920866	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene951	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09065
CleRt_RS09070	CleRT_08680		CleRt_RS09070	924941	925473	-	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene955	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09070
CleRt_RS09075	CleRt_RS09075		CleRt_RS09075	934281	934577	+	hypothetical protein		gene	gene964	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09075
CleRt_RS09080	CleRt_RS09080		CleRt_RS09080	934863	935087	+	hypothetical protein		gene	gene965	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09080
CleRt_RS09085	CleRT_08820		CleRt_RS09085	939006	939561	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene971	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09085
CleRt_RS09090	CleRT_08910		CleRt_RS09090	950253	950478	+	hypothetical protein	frameshifted	pseudogene	gene981	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09090
CleRt_RS09095	CleRt_RS09095		CleRt_RS09095	959491	959619	+	hypothetical protein		gene	gene991	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09095
CleRt_RS09100	CleRT_09170		CleRt_RS09100	976822	977294	-	enhanced entry protein	frameshifted%3B internal stop	pseudogene	gene1007	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09100
CleRt_RS09105	CleRT_09230		CleRt_RS09105	982812	983056	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1013	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09105
CleRt_RS09110	CleRt_RS09110		CleRt_RS09110	985411	985515	+	hypothetical protein		gene	gene1017	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09110
CleRt_RS09115	CleRT_09290		CleRt_RS09115	989194	990546	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1021	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09115
CleRt_RS09120	CleRT_09300		CleRt_RS09120	990942	992073	+	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1022	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09120
CleRt_RS09125	CleRt_RS09125		CleRt_RS09125	1009211	1009543	-	hypothetical protein		gene	gene1037	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09125
CleRt_RS09130	CleRt_RS09130		CleRt_RS09130	1010022	1010210	-	hypothetical protein		gene	gene1038	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09130
CleRt_RS09135	CleRT_09460		CleRt_RS09135	1014890	1015532	-	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1044	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09135
CleRt_RS09140	CleRT_09600		CleRt_RS09140	1031507	1031911	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1057	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09140
CleRt_RS09145	CleRT_09650		CleRt_RS09145	1037525	1037933	-	nucleotidyltransferase	frameshifted%3B internal stop	pseudogene	gene1060	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09145
CleRt_RS09150	CleRt_RS09150		CleRt_RS09150	1058247	1058633	+	hypothetical protein		gene	gene1078	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09150
CleRt_RS09155	CleRt_RS09155		CleRt_RS09155	1076111	1076299	-	hypothetical protein		gene	gene1096	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09155
CleRt_RS09160	CleRt_RS09160		CleRt_RS09160	1139238	1139336	-	hypothetical protein		gene	gene1160	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09160
CleRt_RS09165	CleRt_RS09165		CleRt_RS09165	1139724	1140030	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1162	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09165
CleRt_RS09170	CleRT_10560		CleRt_RS09170	1141515	1141953	+	methylglyoxal synthase	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1164	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09170
CleRt_RS09175	CleRT_10710		CleRt_RS09175	1158941	1160631	-	ABC transporter permease	frameshifted%3B internal stop	pseudogene	gene1178	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09175
CleRt_RS09180	CleRt_RS09180		CleRt_RS09180	1200773	1200988	+	hypothetical protein		gene	gene1209	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09180
CleRt_RS09185	CleRt_RS09185		CleRt_RS09185	1201095	1201310	+	hypothetical protein		gene	gene1210	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09185
CleRt_RS09190	CleRt_RS09190		CleRt_RS09190	1204960	1205283	-	hypothetical protein		gene	gene1214	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09190
CleRt_RS09195	CleRt_RS09195		CleRt_RS09195	1205359	1205553	-	hypothetical protein		gene	gene1215	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09195
CleRt_RS09200	CleRT_11250		CleRt_RS09200	1231655	1232481	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1238	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09200
CleRt_RS09205	CleRt_RS09205		CleRt_RS09205	1249647	1249835	+	hypothetical protein		gene	gene1256	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09205
CleRt_RS09210	CleRt_RS09210		CleRt_RS09210	1250607	1250774	+	hypothetical protein		gene	gene1257	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09210
CleRt_RS09215	CleRt_RS09215		CleRt_RS09215	1255534	1255653	+	hypothetical protein		gene	gene1263	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09215
CleRt_RS09220	CleRt_RS09220		CleRt_RS09220	1255684	1255782	+	hypothetical protein		gene	gene1264	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09220
CleRt_RS09225	CleRT_11660		CleRt_RS09225	1274781	1275135	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1282	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09225
CleRt_RS09230	CleRT_11760		CleRt_RS09230	1284696	1285497	-	short-chain dehydrogenase	frameshifted%3B internal stop	pseudogene	gene1293	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09230
CleRt_RS09235	CleRt_RS09235	ssrA	ssrA	1303192	1303549	+	transfer-messenger RNA		tmRNA	gene1313	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09235
CleRt_RS09240	CleRt_RS09240		CleRt_RS09240	1313957	1314079	+	hypothetical protein		gene	gene1320	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09240
CleRt_RS09245	CleRT_12040		CleRt_RS09245	1316786	1318809	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1323	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09245
CleRt_RS09250	CleRT_12110		CleRt_RS09250	1322937	1323179	+	exodeoxyribonuclease VII small subunit	incomplete%3B partial in the middle of a contig%3B missing start	pseudogene	gene1329	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09250
CleRt_RS09255	CleRT_12130		CleRt_RS09255	1324413	1325004	+	amidophosphoribosyltransferase	frameshifted%3B internal stop	pseudogene	gene1331	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09255
CleRt_RS09260	CleRT_12380		CleRt_RS09260	1348922	1349402	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1356	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09260
CleRt_RS09265	CleRt_RS09265		CleRt_RS09265	1349588	1349731	+	type III pantothenate kinase		gene	gene1357	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09265
CleRt_RS09270	CleRt_RS09270		CleRt_RS09270	1350338	1350490	+	hypothetical protein		gene	gene1359	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09270
CleRt_RS09275	CleRt_RS09275		CleRt_RS09275	1350857	1351198	+	hypothetical protein		gene	gene1360	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09275
CleRt_RS09280	CleRt_RS09280		CleRt_RS09280	1351164	1351325	+	ferric iron reductase		gene	gene1361	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09280
CleRt_RS09285	CleRt_RS09285		CleRt_RS09285	1353451	1353774	-	hypothetical protein		gene	gene1363	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09285
CleRt_RS09290	CleRT_12580		CleRt_RS09290	1368525	1369621	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1376	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09290
CleRt_RS09295	CleRT_12730		CleRt_RS09295	1384588	1385943	+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	frameshifted%3B internal stop	pseudogene	gene1390	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09295
CleRt_RS09300	CleRT_12740		CleRt_RS09300	1385991	1386486	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1391	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09300
CleRt_RS09305	CleRT_12760		CleRt_RS09305	1388554	1389194	-	thiazole synthase	frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1394	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09305
CleRt_RS09310	CleRT_12840		CleRt_RS09310	1397636	1398400	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1402	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09310
CleRt_RS09315	CleRt_RS09315		CleRt_RS09315	1399119	1399307	+	hypothetical protein		gene	gene1404	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09315
CleRt_RS09320	CleRT_12860		CleRt_RS09320	1401511	1402166	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1407	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09320
CleRt_RS09325	CleRT_12930		CleRt_RS09325	1407291	1408056	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1413	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09325
CleRt_RS09330	CleRt_RS09330		CleRt_RS09330	1417040	1417369	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1421	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09330
CleRt_RS09335	CleRt_RS09335		CleRt_RS09335	1417554	1417778	-	hypothetical protein		gene	gene1422	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09335
CleRt_RS09340	CleRt_RS09340		CleRt_RS09340	1423397	1423669	+	hypothetical protein		gene	gene1429	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09340
CleRt_RS09345	CleRt_RS09345		CleRt_RS09345	1423657	1423920	+	hypothetical protein		gene	gene1430	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09345
CleRt_RS09350	CleRT_13160		CleRt_RS09350	1428259	1428518	+	hypothetical protein	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1439	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09350
CleRt_RS09355	CleRT_13260		CleRt_RS09355	1439205	1439698	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1448	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09355
CleRt_RS09360	CleRT_13380		CleRt_RS09360	1451253	1451375	-	50S ribosomal protein L36		gene	gene1460	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09360
CleRt_RS09365	CleRT_13760		CleRt_RS09365	1481924	1483414	-	cytochrome d terminal oxidase subunit 1	part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone%3B frameshifted%3B internal stop	pseudogene	gene1502	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09365
CleRt_RS09370	CleRt_RS09370		CleRt_RS09370	1488479	1488682	+	acyl carrier protein		gene	gene1507	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09370
CleRt_RS09375	CleRT_13830		CleRt_RS09375	1496162	1496569	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1512	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09375
CleRt_RS09380	CleRT_13910		CleRt_RS09380	1506213	1507098	-	MFS transporter	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1521	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09380
CleRt_RS09385	CleRt_RS09385		CleRt_RS09385	1525282	1525479	-	DUF1460 domain-containing protein		gene	gene1536	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09385
CleRt_RS09390	CleRT_14010		CleRt_RS09390	1527042	1527662	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1540	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09390
CleRt_RS09395	CleRt_RS09395		CleRt_RS09395	1533755	1534078	+	hypothetical protein		gene	gene1546	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09395
CleRt_RS09400	CleRT_14110		CleRt_RS09400	1540750	1541187	+	pilus assembly protein PilA	frameshifted%3B internal stop	pseudogene	gene1549	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09400
CleRt_RS09405	CleRT_14140		CleRt_RS09405	1543819	1544674	+	prepilin peptidase	frameshifted%3B internal stop	pseudogene	gene1553	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09405
CleRt_RS09410	CleRt_RS09410		CleRt_RS09410	1556101	1556376	+	hypothetical protein	internal stop	pseudogene	gene1564	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09410
CleRt_RS09415	CleRT_14450		CleRt_RS09415	1579608	1580331	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1586	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09415
CleRt_RS09420	CleRT_14470		CleRt_RS09420	1581109	1581848	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1588	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09420
CleRt_RS09425	CleRT_14500		CleRt_RS09425	1584481	1586063	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1590	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09425
CleRt_RS09430	CleRT_14620		CleRt_RS09430	1593387	1594158	-	sodium:calcium exchanger	frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1598	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09430
CleRt_RS09435	CleRT_14710		CleRt_RS09435	1604262	1605550	-	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1607	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09435
CleRt_RS09440	CleRt_RS09440		CleRt_RS09440	1621774	1621941	-	chorismate lyase		gene	gene1622	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09440
CleRt_RS09445	CleRt_RS09445		CleRt_RS09445	1625251	1625430	+	hypothetical protein		gene	gene1628	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09445
CleRt_RS09450	CleRt_RS09450		CleRt_RS09450	1627544	1627633	+	prepilin-type N-terminal cleavage/methylation domain-containing protein		gene	gene1631	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09450
CleRt_RS09455	CleRT_15000		CleRt_RS09455	1637690	1638150	+	hypothetical protein	frameshifted	pseudogene	gene1639	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09455
CleRt_RS09460	CleRt_RS09460		CleRt_RS09460	1638347	1638529	-	hypothetical protein		gene	gene1640	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09460
CleRt_RS09465	CleRt_RS09465		CleRt_RS09465	1643145	1643318	-	hypothetical protein		gene	gene1645	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09465
CleRt_RS09470	CleRT_15170		CleRt_RS09470	1653396	1653809	+	universal stress protein UspA	frameshifted%3B internal stop	pseudogene	gene1657	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09470
CleRt_RS09475	CleRT_15220		CleRt_RS09475	1656891	1657083	+	hypothetical protein	frameshifted	pseudogene	gene1661	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09475
CleRt_RS09480	CleRt_RS09480		CleRt_RS09480	1657083	1657334	+	toxin YoeB	frameshifted%3B internal stop	pseudogene	gene1662	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09480
CleRt_RS09485	CleRT_15250		CleRt_RS09485	1658743	1658993	+	hypothetical protein	frameshifted	pseudogene	gene1665	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09485
CleRt_RS09490	CleRT_15280		CleRt_RS09490	1660687	1661609	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1668	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09490
CleRt_RS09495	CleRT_15310		CleRt_RS09495	1664385	1664883	+	5-(carboxyamino)imidazole ribonucleotide mutase	frameshifted%3B internal stop	pseudogene	gene1671	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09495
CleRt_RS09500	CleRt_RS09500		CleRt_RS09500	1681872	1682084	+	hypothetical protein		gene	gene1690	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09500
CleRt_RS09505	CleRt_RS09505		CleRt_RS09505	1683376	1683669	-	hypothetical protein	frameshifted	pseudogene	gene1693	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09505
CleRt_RS09510	CleRt_RS09510		CleRt_RS09510	1693169	1693928	+	hypothetical protein	frameshifted%3B internal stop	pseudogene	gene1705	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09510
CleRt_RS09515	CleRt_RS09515		CleRt_RS09515	1694381	1694605	+	ABC transporter ATP-binding protein		gene	gene1707	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09515
CleRt_RS09520	CleRt_RS09520		CleRt_RS09520	1696219	1696326	+	hypothetical protein		gene	gene1708	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09520
CleRt_RS09525	CleRt_RS09525		CleRt_RS09525	1698241	1698390	+	hypothetical protein		gene	gene1710	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09525
CleRt_RS09530	CleRt_RS09530		CleRt_RS09530	1706492	1706809	-	hypothetical protein		gene	gene1716	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09530
CleRt_RS09535	CleRT_15950		CleRt_RS09535	1732773	1733555	-	ATPase	frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop	pseudogene	gene1746	http://www.ncbi.nlm.nih.gov/gene/?term=CleRt_RS09535
