##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM107771v1
#!genome-build-accession NCBI_Assembly:GCF_001077715.1
#!annotation-date 04/10/2017 09:30:30
#!annotation-source NCBI 
##sequence-region NZ_CP011126.1 1 1733840
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1592897
NZ_CP011126.1	RefSeq	region	1	1733840	.	+	.	ID=id0;Dbxref=taxon:1592897;Is_circular=true;Name=ANONYMOUS;collection-date=2010;country=Israel: kibutz Hulda;gbkey=Src;genome=chromosome;mol_type=genomic DNA;nat-host=Rhipicephalus turanicus;strain=CRt
NZ_CP011126.1	RefSeq	gene	26	1375	.	+	.	ID=gene0;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=CleRt_RS00005;old_locus_tag=CleRT_00010
NZ_CP011126.1	Protein Homology	CDS	26	1375	.	+	0	ID=cds0;Parent=gene0;Dbxref=Genbank:WP_048874730.1;Name=WP_048874730.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769932.1;product=chromosomal replication initiator protein DnaA;protein_id=WP_048874730.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1406	2515	.	+	.	ID=gene1;Name=CleRt_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00010;old_locus_tag=CleRT_00020
NZ_CP011126.1	Protein Homology	CDS	1406	2515	.	+	0	ID=cds1;Parent=gene1;Dbxref=Genbank:WP_048874731.1;Name=WP_048874731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002551317.1;product=DNA polymerase III subunit beta;protein_id=WP_048874731.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	2520	3668	.	+	.	ID=gene2;Name=CleRt_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00015;old_locus_tag=CleRT_00030
NZ_CP011126.1	Protein Homology	CDS	2520	3668	.	+	0	ID=cds2;Parent=gene2;Dbxref=Genbank:WP_082160366.1;Name=WP_082160366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996356.1;product=DNA replication/repair protein RecF;protein_id=WP_082160366.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	3843	4289	.	-	.	ID=gene3;Name=CleRt_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00020;old_locus_tag=CleRT_00040
NZ_CP011126.1	Protein Homology	CDS	3843	4289	.	-	0	ID=cds3;Parent=gene3;Dbxref=Genbank:WP_048874732.1;Name=WP_048874732.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01427.15;product=hypothetical protein;protein_id=WP_048874732.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	4653	7073	.	+	.	ID=gene4;Name=CleRt_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00025;old_locus_tag=CleRT_00050
NZ_CP011126.1	Protein Homology	CDS	4653	7073	.	+	0	ID=cds4;Parent=gene4;Dbxref=Genbank:WP_048874733.1;Name=WP_048874733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008940059.1;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_048874733.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	7210	8054	.	+	.	ID=gene5;Name=CleRt_RS00030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00030;old_locus_tag=CleRT_00060;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	7210	8054	.	+	0	ID=cds5;Parent=gene5;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770018.1;product=Ku protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	8075	10442	.	+	.	ID=gene6;Name=CleRt_RS00035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00035;old_locus_tag=CleRT_00070;partial=true;pseudo=true;start_range=.,8075
NZ_CP011126.1	Protein Homology	CDS	8075	10442	.	+	0	ID=cds6;Parent=gene6;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770020.1;partial=true;product=hypothetical protein;pseudo=true;start_range=.,8075;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	10538	10988	.	-	.	ID=gene7;Name=CleRt_RS08535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08535;old_locus_tag=CleRT_00080;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	10538	10988	.	-	0	ID=cds7;Parent=gene7;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570327.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	10991	11566	.	-	.	ID=gene8;Name=CleRt_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00040;old_locus_tag=CleRT_00090
NZ_CP011126.1	Protein Homology	CDS	10991	11566	.	-	0	ID=cds8;Parent=gene8;Dbxref=Genbank:WP_048874734.1;Name=WP_048874734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769941.1;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_048874734.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	11621	11833	.	-	.	ID=gene9;Name=CleRt_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00045
NZ_CP011126.1	GeneMarkS+	CDS	11621	11833	.	-	0	ID=cds9;Parent=gene9;Dbxref=Genbank:WP_048874735.1;Name=WP_048874735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874735.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	12122	13295	.	-	.	ID=gene10;Name=CleRt_RS08540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08540;old_locus_tag=CleRT_00110;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	12122	13295	.	-	0	ID=cds10;Parent=gene10;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252923.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	13410	14387	.	+	.	ID=gene11;Name=CleRt_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00055;old_locus_tag=CleRT_00120
NZ_CP011126.1	Protein Homology	CDS	13410	14387	.	+	0	ID=cds11;Parent=gene11;Dbxref=Genbank:WP_048875736.1;Name=WP_048875736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772808.1;product=signal recognition particle-docking protein FtsY;protein_id=WP_048875736.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	14398	14989	.	+	.	ID=gene12;Name=CleRt_RS00060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00060;old_locus_tag=CleRT_00130;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	14398	14989	.	+	0	ID=cds12;Parent=gene12;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019934565.1;product=cell division ATP-binding protein FtsE;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	14965	15724	.	+	.	ID=gene13;Name=CleRt_RS00065;end_range=15724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00065;old_locus_tag=CleRT_00140;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	14965	15724	.	+	0	ID=cds13;Parent=gene13;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=15724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769958.1;partial=true;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	16650	17513	.	+	.	ID=gene14;Name=CleRt_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00070;old_locus_tag=CleRT_00150
NZ_CP011126.1	Protein Homology	CDS	16650	17513	.	+	0	ID=cds14;Parent=gene14;Dbxref=Genbank:WP_048874736.1;Name=WP_048874736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004373819.1;product=RNA polymerase sigma factor RpoH;protein_id=WP_048874736.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	17560	18372	.	+	.	ID=gene15;Name=CleRt_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00075;old_locus_tag=CleRT_00160
NZ_CP011126.1	Protein Homology	CDS	17560	18372	.	+	0	ID=cds15;Parent=gene15;Dbxref=Genbank:WP_082160483.1;Name=WP_082160483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769970.1;product=hypothetical protein;protein_id=WP_082160483.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	18515	19423	.	+	.	ID=gene16;Name=CleRt_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00080;old_locus_tag=CleRT_00170
NZ_CP011126.1	Protein Homology	CDS	18515	19423	.	+	0	ID=cds16;Parent=gene16;Dbxref=Genbank:WP_048874737.1;Name=WP_048874737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011394022.1;product=glycine--tRNA ligase subunit alpha;protein_id=WP_048874737.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	19423	21492	.	+	.	ID=gene17;Name=CleRt_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00085;old_locus_tag=CleRT_00180
NZ_CP011126.1	Protein Homology	CDS	19423	21492	.	+	0	ID=cds17;Parent=gene17;Dbxref=Genbank:WP_048874738.1;Name=WP_048874738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_040948212.1;product=glycine--tRNA ligase subunit beta;protein_id=WP_048874738.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	22151	22243	.	+	.	ID=gene18;Name=CleRt_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08545
NZ_CP011126.1	Protein Homology	CDS	22151	22243	.	+	0	ID=cds18;Parent=gene18;Dbxref=Genbank:WP_082160484.1;Name=WP_082160484.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01189.15;product=hypothetical protein;protein_id=WP_082160484.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	22259	22447	.	+	.	ID=gene19;Name=CleRt_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08550
NZ_CP011126.1	Protein Homology	CDS	22259	22447	.	+	0	ID=cds19;Parent=gene19;Dbxref=Genbank:WP_082160367.1;Name=WP_082160367.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01189.15;product=hypothetical protein;protein_id=WP_082160367.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	22503	22937	.	-	.	ID=gene20;Name=CleRt_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00090;old_locus_tag=CleRT_00200
NZ_CP011126.1	Protein Homology	CDS	22503	22937	.	-	0	ID=cds20;Parent=gene20;Dbxref=Genbank:WP_048874739.1;Name=WP_048874739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010324332.1;product=universal stress protein;protein_id=WP_048874739.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	23380	23514	.	+	.	ID=gene21;Name=CleRt_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00095;old_locus_tag=CleRT_00210
NZ_CP011126.1	Protein Homology	CDS	23380	23514	.	+	0	ID=cds21;Parent=gene21;Dbxref=Genbank:WP_048874740.1;Name=WP_048874740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958535.1;product=50S ribosomal protein L34;protein_id=WP_048874740.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	23514	23855	.	+	.	ID=gene22;Name=CleRt_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00100;old_locus_tag=CleRT_00220
NZ_CP011126.1	Protein Homology	CDS	23514	23855	.	+	0	ID=cds22;Parent=gene22;Dbxref=Genbank:WP_048874741.1;Name=WP_048874741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043880816.1;product=ribonuclease P protein component;protein_id=WP_048874741.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	23819	24085	.	+	.	ID=gene23;Name=CleRt_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00105;old_locus_tag=CleRT_00230
NZ_CP011126.1	Protein Homology	CDS	23819	24085	.	+	0	ID=cds23;Parent=gene23;Dbxref=Genbank:WP_048874742.1;Name=WP_048874742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769988.1;product=membrane protein insertion efficiency factor YidD;protein_id=WP_048874742.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	24085	25791	.	+	.	ID=gene24;Name=CleRt_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00110;old_locus_tag=CleRT_00240
NZ_CP011126.1	Protein Homology	CDS	24085	25791	.	+	0	ID=cds24;Parent=gene24;Dbxref=Genbank:WP_048874743.1;Name=WP_048874743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569547.1;product=membrane protein insertase YidC;protein_id=WP_048874743.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	26240	27601	.	+	.	ID=gene25;Name=CleRt_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00115;old_locus_tag=CleRT_00250
NZ_CP011126.1	Protein Homology	CDS	26240	27601	.	+	0	ID=cds25;Parent=gene25;Dbxref=Genbank:WP_048874744.1;Name=WP_048874744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011400748.1;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_048874744.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	27657	29537	.	+	.	ID=gene26;Name=CleRt_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00120;old_locus_tag=CleRT_00260
NZ_CP011126.1	Protein Homology	CDS	27657	29537	.	+	0	ID=cds26;Parent=gene26;Dbxref=Genbank:WP_048875738.1;Name=WP_048875738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958541.1;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_048875738.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	29629	29811	.	+	.	ID=gene27;Name=CleRt_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08555
NZ_CP011126.1	Protein Homology	CDS	29629	29811	.	+	0	ID=cds27;Parent=gene27;Dbxref=Genbank:WP_082160485.1;Name=WP_082160485.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02527.13;product=hypothetical protein;protein_id=WP_082160485.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	30089	30862	.	+	.	ID=gene28;Name=CleRt_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00125;old_locus_tag=CleRT_00280
NZ_CP011126.1	Protein Homology	CDS	30089	30862	.	+	0	ID=cds28;Parent=gene28;Dbxref=Genbank:WP_048874745.1;Name=WP_048874745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770002.1;product=ParA family protein;protein_id=WP_048874745.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	30859	31731	.	+	.	ID=gene29;Name=CleRt_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00130;old_locus_tag=CleRT_00290
NZ_CP011126.1	Protein Homology	CDS	30859	31731	.	+	0	ID=cds29;Parent=gene29;Dbxref=Genbank:WP_048874746.1;Name=WP_048874746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220859.1;product=chromosome partitioning protein ParB;protein_id=WP_048874746.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	31751	34038	.	+	.	ID=gene30;Name=CleRt_RS08560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08560;old_locus_tag=CleRT_00300;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	31751	34038	.	+	0	ID=cds30;Parent=gene30;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958545.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	35048	35236	.	-	.	ID=gene31;Name=CleRt_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00150
NZ_CP011126.1	GeneMarkS+	CDS	35048	35236	.	-	0	ID=cds31;Parent=gene31;Dbxref=Genbank:WP_048874750.1;Name=WP_048874750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874750.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	35937	36341	.	+	.	ID=gene32;Name=CleRt_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00155;old_locus_tag=CleRT_00320
NZ_CP011126.1	Protein Homology	CDS	35937	36341	.	+	0	ID=cds32;Parent=gene32;Dbxref=Genbank:WP_048874751.1;Name=WP_048874751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220869.1;product=ATP synthase F0 subunit I;protein_id=WP_048874751.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	36353	37147	.	+	.	ID=gene33;Name=CleRt_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00160;old_locus_tag=CleRT_00330
NZ_CP011126.1	Protein Homology	CDS	36353	37147	.	+	0	ID=cds33;Parent=gene33;Dbxref=Genbank:WP_048874752.1;Name=WP_048874752.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569561.1;product=F0F1 ATP synthase subunit A;protein_id=WP_048874752.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	37168	37473	.	+	.	ID=gene34;Name=CleRt_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00165;old_locus_tag=CleRT_00340
NZ_CP011126.1	Protein Homology	CDS	37168	37473	.	+	0	ID=cds34;Parent=gene34;Dbxref=Genbank:WP_048874753.1;Name=WP_048874753.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B subunit C is part of the membrane proton channel F0;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019864635.1;product=F0F1 ATP synthase subunit C;protein_id=WP_048874753.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	37533	38003	.	+	.	ID=gene35;Name=CleRt_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00170;old_locus_tag=CleRT_00350
NZ_CP011126.1	Protein Homology	CDS	37533	38003	.	+	0	ID=cds35;Parent=gene35;Dbxref=Genbank:WP_048874754.1;Name=WP_048874754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770032.1;product=F0F1 ATP synthase subunit B;protein_id=WP_048874754.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	38006	38563	.	+	.	ID=gene36;Name=CleRt_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00175;old_locus_tag=CleRT_00360
NZ_CP011126.1	Protein Homology	CDS	38006	38563	.	+	0	ID=cds36;Parent=gene36;Dbxref=Genbank:WP_048874755.1;Name=WP_048874755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958555.1;product=F0F1 ATP synthase subunit delta;protein_id=WP_048874755.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	38570	40117	.	+	.	ID=gene37;Name=CleRt_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00180;old_locus_tag=CleRT_00370
NZ_CP011126.1	Protein Homology	CDS	38570	40117	.	+	0	ID=cds37;Parent=gene37;Dbxref=Genbank:WP_048874756.1;Name=WP_048874756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770035.1;product=F0F1 ATP synthase subunit alpha;protein_id=WP_048874756.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	40146	41015	.	+	.	ID=gene38;Name=CleRt_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00185;old_locus_tag=CleRT_00380
NZ_CP011126.1	Protein Homology	CDS	40146	41015	.	+	0	ID=cds38;Parent=gene38;Dbxref=Genbank:WP_048874757.1;Name=WP_048874757.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569562.1;product=F0F1 ATP synthase subunit gamma;protein_id=WP_048874757.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	41041	42420	.	+	.	ID=gene39;Name=CleRt_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00190;old_locus_tag=CleRT_00390
NZ_CP011126.1	Protein Homology	CDS	41041	42420	.	+	0	ID=cds39;Parent=gene39;Dbxref=Genbank:WP_048875739.1;Name=WP_048875739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013221906.1;product=F0F1 ATP synthase subunit beta;protein_id=WP_048875739.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	42537	42962	.	+	.	ID=gene40;Name=CleRt_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00195;old_locus_tag=CleRT_00400
NZ_CP011126.1	Protein Homology	CDS	42537	42962	.	+	0	ID=cds40;Parent=gene40;Dbxref=Genbank:WP_048874758.1;Name=WP_048874758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006035885.1;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_048874758.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	42987	44384	.	+	.	ID=gene41;Name=CleRt_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00200;old_locus_tag=CleRT_00410
NZ_CP011126.1	Protein Homology	CDS	42987	44384	.	+	0	ID=cds41;Parent=gene41;Dbxref=Genbank:WP_048874759.1;Name=WP_048874759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014844919.1;product=UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase;protein_id=WP_048874759.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	45757	45957	.	+	.	ID=gene42;Name=CleRt_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00205
NZ_CP011126.1	GeneMarkS+	CDS	45757	45957	.	+	0	ID=cds42;Parent=gene42;Dbxref=Genbank:WP_048874760.1;Name=WP_048874760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874760.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	46321	46614	.	+	.	ID=gene43;Name=CleRt_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00210;old_locus_tag=CleRT_00420
NZ_CP011126.1	GeneMarkS+	CDS	46321	46614	.	+	0	ID=cds43;Parent=gene43;Dbxref=Genbank:WP_048874761.1;Name=WP_048874761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874761.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	46681	46878	.	+	.	ID=gene44;Name=CleRt_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00215
NZ_CP011126.1	GeneMarkS+	CDS	46681	46878	.	+	0	ID=cds44;Parent=gene44;Dbxref=Genbank:WP_048874762.1;Name=WP_048874762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874762.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	47962	48183	.	+	.	ID=gene45;Name=CleRt_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00220
NZ_CP011126.1	GeneMarkS+	CDS	47962	48183	.	+	0	ID=cds45;Parent=gene45;Dbxref=Genbank:WP_048874763.1;Name=WP_048874763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874763.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	48252	48692	.	-	.	ID=gene46;Name=CleRt_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00225;old_locus_tag=CleRT_00440
NZ_CP011126.1	GeneMarkS+	CDS	48252	48692	.	-	0	ID=cds46;Parent=gene46;Dbxref=Genbank:WP_048874764.1;Name=WP_048874764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874764.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	48800	49083	.	+	.	ID=gene47;Name=CleRt_RS00230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00230;old_locus_tag=CleRT_00450;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	48800	49083	.	+	0	ID=cds47;Parent=gene47;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253485.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	49080	49447	.	+	.	ID=gene48;Name=CleRt_RS00235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00235;old_locus_tag=CleRT_00460;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	49080	49447	.	+	0	ID=cds48;Parent=gene48;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996438.1;product=pyridine nucleotide transhydrogenase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	49797	50021	.	+	.	ID=gene49;Name=CleRt_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08135
NZ_CP011126.1	Protein Homology	CDS	49797	50021	.	+	0	ID=cds49;Parent=gene49;Dbxref=Genbank:WP_082160368.1;Name=WP_082160368.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02233.14;product=hypothetical protein;protein_id=WP_082160368.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	50200	50652	.	+	.	ID=gene50;Name=CleRt_RS08140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08140;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	50200	50652	.	+	0	ID=cds50;Parent=gene50;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020560636.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	51405	52138	.	-	.	ID=gene51;Name=CleRt_RS00245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00245;old_locus_tag=CleRT_00480;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	51405	52138	.	-	0	ID=cds51;Parent=gene51;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770072.1;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	52222	54264	.	+	.	ID=gene52;Name=CleRt_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00250;old_locus_tag=CleRT_00490
NZ_CP011126.1	Protein Homology	CDS	52222	54264	.	+	0	ID=cds52;Parent=gene52;Dbxref=Genbank:WP_048874766.1;Name=WP_048874766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015880039.1;product=M3 family peptidase;protein_id=WP_048874766.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	54287	55297	.	+	.	ID=gene53;Name=CleRt_RS08565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08565;old_locus_tag=CleRT_00500;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	54287	55297	.	+	0	ID=cds53;Parent=gene53;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569701.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	55354	55871	.	+	.	ID=gene54;Name=CleRt_RS00260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00260;old_locus_tag=CleRT_00510;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	55354	55871	.	+	0	ID=cds54;Parent=gene54;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569699.1;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	55906	56232	.	+	.	ID=gene55;Name=CleRt_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00265;old_locus_tag=CleRT_00520
NZ_CP011126.1	GeneMarkS+	CDS	55906	56232	.	+	0	ID=cds55;Parent=gene55;Dbxref=Genbank:WP_082160369.1;Name=WP_082160369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160369.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	56435	57712	.	+	.	ID=gene56;Name=CleRt_RS00270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00270;old_locus_tag=CleRT_00530;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	56435	57712	.	+	0	ID=cds56;Parent=gene56;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770365.1;product=beta-ketoacyl-ACP synthase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	58119	58265	.	-	.	ID=gene57;Name=CleRt_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08570
NZ_CP011126.1	Protein Homology	CDS	58119	58265	.	-	0	ID=cds57;Parent=gene57;Dbxref=Genbank:WP_082160370.1;Name=WP_082160370.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02353.18;product=hypothetical protein;protein_id=WP_082160370.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	58247	58357	.	-	.	ID=gene58;Name=CleRt_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08575
NZ_CP011126.1	Protein Homology	CDS	58247	58357	.	-	0	ID=cds58;Parent=gene58;Dbxref=Genbank:WP_082160371.1;Name=WP_082160371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02353.18;product=hypothetical protein;protein_id=WP_082160371.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	58370	58603	.	-	.	ID=gene59;Name=CleRt_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08580
NZ_CP011126.1	Protein Homology	CDS	58370	58603	.	-	0	ID=cds59;Parent=gene59;Dbxref=Genbank:WP_082160372.1;Name=WP_082160372.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02353.18;product=hypothetical protein;protein_id=WP_082160372.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	59111	59323	.	+	.	ID=gene60;Name=CleRt_RS08585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08585;old_locus_tag=CleRT_00550;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	59111	59323	.	+	0	ID=cds60;Parent=gene60;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770362.1;product=acyl carrier protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	60008	61240	.	+	.	ID=gene61;Name=CleRt_RS00275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00275;old_locus_tag=CleRT_00570;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	60008	61240	.	+	0	ID=cds61;Parent=gene61;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957336.1;product=hydroxymethylglutaryl-CoA reductase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	61897	63631	.	+	.	ID=gene62;Name=CleRt_RS00280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00280;old_locus_tag=CleRT_00590;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	61897	63631	.	+	0	ID=cds62;Parent=gene62;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220879.1;product=FAD-binding protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	64192	64416	.	-	.	ID=gene63;Name=CleRt_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08590
NZ_CP011126.1	Protein Homology	CDS	64192	64416	.	-	0	ID=cds63;Parent=gene63;Dbxref=Genbank:WP_082160373.1;Name=WP_082160373.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10520.7;product=hypothetical protein;protein_id=WP_082160373.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	64413	64625	.	-	.	ID=gene64;Name=CleRt_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08595
NZ_CP011126.1	Protein Homology	CDS	64413	64625	.	-	0	ID=cds64;Parent=gene64;Dbxref=Genbank:WP_082160374.1;Name=WP_082160374.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10520.7;product=hypothetical protein;protein_id=WP_082160374.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	65065	66000	.	+	.	ID=gene65;Name=CleRt_RS00285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00285;old_locus_tag=CleRT_00620;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	65065	66000	.	+	0	ID=cds65;Parent=gene65;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570552.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	66389	66652	.	-	.	ID=gene66;Name=CleRt_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08600
NZ_CP011126.1	GeneMarkS+	CDS	66389	66652	.	-	0	ID=cds66;Parent=gene66;Dbxref=Genbank:WP_082160375.1;Name=WP_082160375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160375.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	66656	67086	.	+	.	ID=gene67;Name=CleRt_RS08605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08605;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	66656	67086	.	+	0	ID=cds67;Parent=gene67;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014456297.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	67099	67767	.	+	.	ID=gene68;Name=CleRt_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00295;old_locus_tag=CleRT_00640
NZ_CP011126.1	Protein Homology	CDS	67099	67767	.	+	0	ID=cds68;Parent=gene68;Dbxref=Genbank:WP_048874768.1;Name=WP_048874768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770348.1;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_048874768.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	67964	68254	.	+	.	ID=gene69;Name=CleRt_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00300;old_locus_tag=CleRT_00650
NZ_CP011126.1	Protein Homology	CDS	67964	68254	.	+	0	ID=cds69;Parent=gene69;Dbxref=Genbank:WP_048874769.1;Name=WP_048874769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007227058.1;product=carbon storage regulator;protein_id=WP_048874769.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	68555	69070	.	+	.	ID=gene70;Name=CleRt_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00305;old_locus_tag=CleRT_00660
NZ_CP011126.1	Protein Homology	CDS	68555	69070	.	+	0	ID=cds70;Parent=gene70;Dbxref=Genbank:WP_048874770.1;Name=WP_048874770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220881.1;product=hypothetical protein;protein_id=WP_048874770.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	69323	69604	.	-	.	ID=gene71;Name=CleRt_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00310
NZ_CP011126.1	GeneMarkS+	CDS	69323	69604	.	-	0	ID=cds71;Parent=gene71;Dbxref=Genbank:WP_048874771.1;Name=WP_048874771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874771.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	70970	71167	.	-	.	ID=gene72;Name=CleRt_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00315
NZ_CP011126.1	GeneMarkS+	CDS	70970	71167	.	-	0	ID=cds72;Parent=gene72;Dbxref=Genbank:WP_048874772.1;Name=WP_048874772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874772.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	71552	72053	.	+	.	ID=gene73;Name=CleRt_RS00320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00320;old_locus_tag=CleRT_00670;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	71552	72053	.	+	0	ID=cds73;Parent=gene73;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770338.1;product=ribosomal subunit interface protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	72060	72797	.	-	.	ID=gene74;Name=CleRt_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00325;old_locus_tag=CleRT_00680
NZ_CP011126.1	Protein Homology	CDS	72060	72797	.	-	0	ID=cds74;Parent=gene74;Dbxref=Genbank:WP_048874773.1;Name=WP_048874773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252836.1;product=deoxyribose-phosphate aldolase;protein_id=WP_048874773.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	72794	73615	.	-	.	ID=gene75;Name=CleRt_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00330;old_locus_tag=CleRT_00690
NZ_CP011126.1	Protein Homology	CDS	72794	73615	.	-	0	ID=cds75;Parent=gene75;Dbxref=Genbank:WP_048874774.1;Name=WP_048874774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957328.1;product=purine-nucleoside phosphorylase;protein_id=WP_048874774.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	73619	74242	.	-	.	ID=gene76;Name=CleRt_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00335;old_locus_tag=CleRT_00700
NZ_CP011126.1	Protein Homology	CDS	73619	74242	.	-	0	ID=cds76;Parent=gene76;Dbxref=Genbank:WP_048874775.1;Name=WP_048874775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770330.1;product=TIGR00153 family protein;protein_id=WP_048874775.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	74377	74574	.	-	.	ID=gene77;Name=CleRt_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00340
NZ_CP011126.1	GeneMarkS+	CDS	74377	74574	.	-	0	ID=cds77;Parent=gene77;Dbxref=Genbank:WP_048874776.1;Name=WP_048874776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874776.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	74677	75087	.	-	.	ID=gene78;Name=CleRt_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00345
NZ_CP011126.1	GeneMarkS+	CDS	74677	75087	.	-	0	ID=cds78;Parent=gene78;Dbxref=Genbank:WP_048874777.1;Name=WP_048874777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874777.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	75708	76227	.	+	.	ID=gene79;Name=CleRt_RS08145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08145;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	75708	76227	.	+	0	ID=cds79;Parent=gene79;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013746645.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	76333	76530	.	+	.	ID=gene80;Name=CleRt_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00355
NZ_CP011126.1	GeneMarkS+	CDS	76333	76530	.	+	0	ID=cds80;Parent=gene80;Dbxref=Genbank:WP_048874778.1;Name=WP_048874778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874778.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	76535	76951	.	+	.	ID=gene81;Name=CleRt_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00360;old_locus_tag=CleRT_00730
NZ_CP011126.1	GeneMarkS+	CDS	76535	76951	.	+	0	ID=cds81;Parent=gene81;Dbxref=Genbank:WP_048874779.1;Name=WP_048874779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874779.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	77285	78124	.	-	.	ID=gene82;Name=CleRt_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00365;old_locus_tag=CleRT_00740
NZ_CP011126.1	Protein Homology	CDS	77285	78124	.	-	0	ID=cds82;Parent=gene82;Dbxref=Genbank:WP_048875740.1;Name=WP_048875740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770326.1;product=shikimate dehydrogenase;protein_id=WP_048875740.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	78149	79548	.	-	.	ID=gene83;Name=CleRt_RS00370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00370;old_locus_tag=CleRT_00750;partial=true;pseudo=true;start_range=.,78149
NZ_CP011126.1	Protein Homology	CDS	78149	79548	.	-	0	ID=cds83;Parent=gene83;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220887.1;partial=true;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;pseudo=true;start_range=.,78149;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	79598	80161	.	-	.	ID=gene84;Name=CleRt_RS08610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08610;old_locus_tag=CleRT_00760;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	79598	80161	.	-	0	ID=cds84;Parent=gene84;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220888.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	80403	81629	.	+	.	ID=gene85;Name=CleRt_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00375;old_locus_tag=CleRT_00770
NZ_CP011126.1	Protein Homology	CDS	80403	81629	.	+	0	ID=cds85;Parent=gene85;Dbxref=Genbank:WP_048874780.1;Name=WP_048874780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772670.1;product=MFS transporter;protein_id=WP_048874780.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	82886	83983	.	-	.	ID=gene86;Name=CleRt_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00380;old_locus_tag=CleRT_00780
NZ_CP011126.1	Protein Homology	CDS	82886	83983	.	-	0	ID=cds86;Parent=gene86;Dbxref=Genbank:WP_048874781.1;Name=WP_048874781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012486100.1;product=3-dehydroquinate synthase;protein_id=WP_048874781.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	83988	84479	.	-	.	ID=gene87;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=CleRt_RS00385;old_locus_tag=CleRT_00790
NZ_CP011126.1	Protein Homology	CDS	83988	84479	.	-	0	ID=cds87;Parent=gene87;Dbxref=Genbank:WP_082160486.1;Name=WP_082160486.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772668.1;product=shikimate kinase;protein_id=WP_082160486.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	85186	85524	.	-	.	ID=gene88;Name=CleRt_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08615
NZ_CP011126.1	GeneMarkS+	CDS	85186	85524	.	-	0	ID=cds88;Parent=gene88;Dbxref=Genbank:WP_082160376.1;Name=WP_082160376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160376.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	86632	86889	.	-	.	ID=gene89;Name=CleRt_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00395
NZ_CP011126.1	GeneMarkS+	CDS	86632	86889	.	-	0	ID=cds89;Parent=gene89;Dbxref=Genbank:WP_048874782.1;Name=WP_048874782.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874782.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	87362	89668	.	+	.	ID=gene90;Name=CleRt_RS00400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00400;old_locus_tag=CleRT_00840;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	87362	89668	.	+	0	ID=cds90;Parent=gene90;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996417.1;product=peptidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	89682	90191	.	-	.	ID=gene91;Name=CleRt_RS00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00405;old_locus_tag=CleRT_00850;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	89682	90191	.	-	0	ID=cds91;Parent=gene91;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007086768.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	90303	91617	.	-	.	ID=gene92;Name=CleRt_RS00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00410;old_locus_tag=CleRT_00860;partial=true;pseudo=true;start_range=.,90303
NZ_CP011126.1	Protein Homology	CDS	90303	91617	.	-	0	ID=cds92;Parent=gene92;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway%3B frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002958915.1;partial=true;product=aspartate aminotransferase family protein;pseudo=true;start_range=.,90303;transl_table=11
NZ_CP011126.1	RefSeq	gene	91649	91819	.	+	.	ID=gene93;Name=CleRt_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00415;old_locus_tag=CleRT_00870
NZ_CP011126.1	Protein Homology	CDS	91649	91819	.	+	0	ID=cds93;Parent=gene93;Dbxref=Genbank:WP_048874783.1;Name=WP_048874783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770288.1;product=rubredoxin;protein_id=WP_048874783.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	91891	92037	.	-	.	ID=gene94;Name=CleRt_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08620
NZ_CP011126.1	Protein Homology	CDS	91891	92037	.	-	0	ID=cds94;Parent=gene94;Dbxref=Genbank:WP_082160377.1;Name=WP_082160377.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03653.11;product=hypothetical protein;protein_id=WP_082160377.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	92118	92294	.	-	.	ID=gene95;Name=CleRt_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08625
NZ_CP011126.1	Protein Homology	CDS	92118	92294	.	-	0	ID=cds95;Parent=gene95;Dbxref=Genbank:WP_082160487.1;Name=WP_082160487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020565841.1;product=hypothetical protein;protein_id=WP_082160487.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	92439	92849	.	+	.	ID=gene96;Name=CleRt_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00425;old_locus_tag=CleRT_00890
NZ_CP011126.1	Protein Homology	CDS	92439	92849	.	+	0	ID=cds96;Parent=gene96;Dbxref=Genbank:WP_048874784.1;Name=WP_048874784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770281.1;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_048874784.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	92815	93621	.	-	.	ID=gene97;Name=CleRt_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00430;old_locus_tag=CleRT_00900
NZ_CP011126.1	Protein Homology	CDS	92815	93621	.	-	0	ID=cds97;Parent=gene97;Dbxref=Genbank:WP_048874785.1;Name=WP_048874785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996411.1;product=SAM-dependent methyltransferase;protein_id=WP_048874785.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	93632	94597	.	-	.	ID=gene98;Name=CleRt_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00435;old_locus_tag=CleRT_00910
NZ_CP011126.1	Protein Homology	CDS	93632	94597	.	-	0	ID=cds98;Parent=gene98;Dbxref=Genbank:WP_048874786.1;Name=WP_048874786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770275.1;product=glutathione synthase;protein_id=WP_048874786.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	94608	95891	.	-	.	ID=gene99;Name=CleRt_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00440;old_locus_tag=CleRT_00920
NZ_CP011126.1	Protein Homology	CDS	94608	95891	.	-	0	ID=cds99;Parent=gene99;Dbxref=Genbank:WP_048874787.1;Name=WP_048874787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996410.1;product=glutamate--cysteine ligase;protein_id=WP_048874787.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	96086	96898	.	+	.	ID=gene100;Name=CleRt_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00445;old_locus_tag=CleRT_00930
NZ_CP011126.1	Protein Homology	CDS	96086	96898	.	+	0	ID=cds100;Parent=gene100;Dbxref=Genbank:WP_048874788.1;Name=WP_048874788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010597990.1;product=co-chaperone DjlA;protein_id=WP_048874788.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	96929	97621	.	+	.	ID=gene101;Name=CleRt_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00450;old_locus_tag=CleRT_00940
NZ_CP011126.1	Protein Homology	CDS	96929	97621	.	+	0	ID=cds101;Parent=gene101;Dbxref=Genbank:WP_082160488.1;Name=WP_082160488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958506.1;product=ribulose-phosphate 3-epimerase;protein_id=WP_082160488.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	97648	98295	.	-	.	ID=gene102;Name=CleRt_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00455;old_locus_tag=CleRT_00950
NZ_CP011126.1	Protein Homology	CDS	97648	98295	.	-	0	ID=cds102;Parent=gene102;Dbxref=Genbank:WP_048874789.1;Name=WP_048874789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958504.1;product=demethoxyubiquinone hydroxylase family protein;protein_id=WP_048874789.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	98285	98968	.	-	.	ID=gene103;Name=CleRt_RS00460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00460;old_locus_tag=CleRT_00960;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	98285	98968	.	-	0	ID=cds103;Parent=gene103;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220837.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	99138	101381	.	+	.	ID=gene104;Name=CleRt_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00465;old_locus_tag=CleRT_00970
NZ_CP011126.1	Protein Homology	CDS	99138	101381	.	+	0	ID=cds104;Parent=gene104;Dbxref=Genbank:WP_048875743.1;Name=WP_048875743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220836.1;product=DNA topoisomerase IV subunit A;protein_id=WP_048875743.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	101411	101958	.	+	.	ID=gene105;Name=CleRt_RS00470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00470;old_locus_tag=CleRT_00980;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	101411	101958	.	+	0	ID=cds105;Parent=gene105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772675.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	101945	102931	.	-	.	ID=gene106;Name=CleRt_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00475;old_locus_tag=CleRT_00990
NZ_CP011126.1	Protein Homology	CDS	101945	102931	.	-	0	ID=cds106;Parent=gene106;Dbxref=Genbank:WP_048874790.1;Name=WP_048874790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569667.1;product=EF-P beta-lysylation protein EpmB;protein_id=WP_048874790.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	103195	105401	.	+	.	ID=gene107;Name=CleRt_RS00480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00480;old_locus_tag=CleRT_01000;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	103195	105401	.	+	0	ID=cds107;Parent=gene107;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996405.1;product=peptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	105414	106278	.	+	.	ID=gene108;Name=CleRt_RS08630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08630;old_locus_tag=CleRT_01010;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	105414	106278	.	+	0	ID=cds108;Parent=gene108;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013835405.1;product=peptide ABC transporter permease;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	107632	108972	.	+	.	ID=gene109;Name=CleRt_RS08635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08635;old_locus_tag=CleRT_01030;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	107632	108972	.	+	0	ID=cds109;Parent=gene109;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770246.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	109021	110097	.	+	.	ID=gene110;Name=CleRt_RS00490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00490;old_locus_tag=CleRT_01040;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	109021	110097	.	+	0	ID=cds110;Parent=gene110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770244.1;product=3-hydroxyisobutyryl-CoA hydrolase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	111700	111897	.	-	.	ID=gene111;Name=CleRt_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08640
NZ_CP011126.1	GeneMarkS+	CDS	111700	111897	.	-	0	ID=cds111;Parent=gene111;Dbxref=Genbank:WP_082160378.1;Name=WP_082160378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160378.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	112009	112173	.	-	.	ID=gene112;Name=CleRt_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08645
NZ_CP011126.1	Protein Homology	CDS	112009	112173	.	-	0	ID=cds112;Parent=gene112;Dbxref=Genbank:WP_082160489.1;Name=WP_082160489.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01370.19;product=hypothetical protein;protein_id=WP_082160489.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	112356	112565	.	-	.	ID=gene113;Name=CleRt_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08650
NZ_CP011126.1	GeneMarkS+	CDS	112356	112565	.	-	0	ID=cds113;Parent=gene113;Dbxref=Genbank:WP_082160379.1;Name=WP_082160379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160379.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	112598	113143	.	-	.	ID=gene114;Name=CleRt_RS08655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08655;old_locus_tag=CleRT_01080;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	112598	113143	.	-	0	ID=cds114;Parent=gene114;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006833232.1;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	113186	114038	.	-	.	ID=gene115;Name=CleRt_RS00500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00500;old_locus_tag=CleRT_01090;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	113186	114038	.	-	0	ID=cds115;Parent=gene115;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220820.1;product=glucose-1-phosphate thymidylyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	114245	115470	.	+	.	ID=gene116;Name=CleRt_RS00505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00505;old_locus_tag=CleRT_01100;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	114245	115470	.	+	0	ID=cds116;Parent=gene116;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772140.1;product=homoserine dehydrogenase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	116744	116932	.	+	.	ID=gene117;Name=CleRt_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00510
NZ_CP011126.1	GeneMarkS+	CDS	116744	116932	.	+	0	ID=cds117;Parent=gene117;Dbxref=Genbank:WP_048874791.1;Name=WP_048874791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874791.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	118360	118542	.	-	.	ID=gene118;Name=CleRt_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08660
NZ_CP011126.1	GeneMarkS+	CDS	118360	118542	.	-	0	ID=cds118;Parent=gene118;Dbxref=Genbank:WP_082160380.1;Name=WP_082160380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160380.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	118575	118952	.	-	.	ID=gene119;Name=CleRt_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00520
NZ_CP011126.1	Protein Homology	CDS	118575	118952	.	-	0	ID=cds119;Parent=gene119;Dbxref=Genbank:WP_082160381.1;Name=WP_082160381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00582.24;product=universal stress protein;protein_id=WP_082160381.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	119190	119402	.	-	.	ID=gene120;Name=CleRt_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00525
NZ_CP011126.1	GeneMarkS+	CDS	119190	119402	.	-	0	ID=cds120;Parent=gene120;Dbxref=Genbank:WP_048874793.1;Name=WP_048874793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=universal stress protein;protein_id=WP_048874793.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	120149	120222	.	-	.	ID=gene121;Name=CleRt_RS00530;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS00530;old_locus_tag=CleRT_t001
NZ_CP011126.1	tRNAscan-SE	tRNA	120149	120222	.	-	.	ID=rna0;Parent=gene121;anticodon=(pos:complement(120186..120188));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Met
NZ_CP011126.1	tRNAscan-SE	exon	120149	120222	.	-	.	ID=id1;Parent=rna0;anticodon=(pos:complement(120186..120188));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Met
NZ_CP011126.1	RefSeq	gene	120283	121383	.	-	.	ID=gene122;Name=CleRt_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00535;old_locus_tag=CleRT_01150
NZ_CP011126.1	Protein Homology	CDS	120283	121383	.	-	0	ID=cds121;Parent=gene122;Dbxref=Genbank:WP_048874794.1;Name=WP_048874794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770213.1;product=redox-regulated ATPase YchF;protein_id=WP_048874794.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	121427	121990	.	-	.	ID=gene123;Name=CleRt_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00540;old_locus_tag=CleRT_01160
NZ_CP011126.1	Protein Homology	CDS	121427	121990	.	-	0	ID=cds122;Parent=gene123;Dbxref=Genbank:WP_048874795.1;Name=WP_048874795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996391.1;product=aminoacyl-tRNA hydrolase;protein_id=WP_048874795.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	122057	122719	.	-	.	ID=gene124;Name=CleRt_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00545;old_locus_tag=CleRT_01170
NZ_CP011126.1	Protein Homology	CDS	122057	122719	.	-	0	ID=cds123;Parent=gene124;Dbxref=Genbank:WP_048875744.1;Name=WP_048875744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770208.1;product=50S ribosomal protein L25;protein_id=WP_048875744.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	123036	123221	.	+	.	ID=gene125;Name=CleRt_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00550
NZ_CP011126.1	Protein Homology	CDS	123036	123221	.	+	0	ID=cds124;Parent=gene125;Dbxref=Genbank:WP_048874796.1;Name=WP_048874796.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07690.14;product=hypothetical protein;protein_id=WP_048874796.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	123221	123475	.	+	.	ID=gene126;Name=CleRt_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00555
NZ_CP011126.1	GeneMarkS+	CDS	123221	123475	.	+	0	ID=cds125;Parent=gene126;Dbxref=Genbank:WP_048874797.1;Name=WP_048874797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874797.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	123603	123854	.	+	.	ID=gene127;Name=CleRt_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00560
NZ_CP011126.1	GeneMarkS+	CDS	123603	123854	.	+	0	ID=cds126;Parent=gene127;Dbxref=Genbank:WP_048874798.1;Name=WP_048874798.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874798.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	124137	125096	.	-	.	ID=gene128;Name=CleRt_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00565;old_locus_tag=CleRT_01190
NZ_CP011126.1	Protein Homology	CDS	124137	125096	.	-	0	ID=cds127;Parent=gene128;Dbxref=Genbank:WP_082160382.1;Name=WP_082160382.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770178.1;product=ribose-phosphate pyrophosphokinase;protein_id=WP_082160382.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	125124	125198	.	-	.	ID=gene129;Name=CleRt_RS00570;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS00570;old_locus_tag=CleRT_t002
NZ_CP011126.1	tRNAscan-SE	tRNA	125124	125198	.	-	.	ID=rna1;Parent=gene129;anticodon=(pos:complement(125164..125166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Gln
NZ_CP011126.1	tRNAscan-SE	exon	125124	125198	.	-	.	ID=id2;Parent=rna1;anticodon=(pos:complement(125164..125166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Gln
NZ_CP011126.1	RefSeq	gene	125877	126143	.	-	.	ID=gene130;Name=CleRt_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00575;old_locus_tag=CleRT_01200
NZ_CP011126.1	GeneMarkS+	CDS	125877	126143	.	-	0	ID=cds128;Parent=gene130;Dbxref=Genbank:WP_048874799.1;Name=WP_048874799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874799.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	126133	126429	.	-	.	ID=gene131;Name=CleRt_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08665
NZ_CP011126.1	Protein Homology	CDS	126133	126429	.	-	0	ID=cds129;Parent=gene131;Dbxref=Genbank:WP_082160383.1;Name=WP_082160383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13847.4;product=methyltransferase domain-containing protein;protein_id=WP_082160383.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	126795	127421	.	-	.	ID=gene132;Name=CleRt_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00580;old_locus_tag=CleRT_01210
NZ_CP011126.1	Protein Homology	CDS	126795	127421	.	-	0	ID=cds130;Parent=gene132;Dbxref=Genbank:WP_048874800.1;Name=WP_048874800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770176.1;product=outer membrane lipoprotein LolB;protein_id=WP_048874800.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	127622	128785	.	+	.	ID=gene133;Name=CleRt_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00585;old_locus_tag=CleRT_01220
NZ_CP011126.1	Protein Homology	CDS	127622	128785	.	+	0	ID=cds131;Parent=gene133;Dbxref=Genbank:WP_048874801.1;Name=WP_048874801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770174.1;product=SAM-dependent methyltransferase;protein_id=WP_048874801.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	128786	129898	.	-	.	ID=gene134;Name=CleRt_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00590;old_locus_tag=CleRT_01230
NZ_CP011126.1	Protein Homology	CDS	128786	129898	.	-	0	ID=cds132;Parent=gene134;Dbxref=Genbank:WP_082160384.1;Name=WP_082160384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018954161.1;product=multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase;protein_id=WP_082160384.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	129999	130838	.	+	.	ID=gene135;Name=CleRt_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00595;old_locus_tag=CleRT_01240
NZ_CP011126.1	Protein Homology	CDS	129999	130838	.	+	0	ID=cds133;Parent=gene135;Dbxref=Genbank:WP_048874803.1;Name=WP_048874803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996381.1;product=phosphatidylserine decarboxylase;protein_id=WP_048874803.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	131088	131617	.	+	.	ID=gene136;Name=CleRt_RS00600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00600;old_locus_tag=CleRT_01250;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	131088	131617	.	+	0	ID=cds134;Parent=gene136;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772170.1;product=superoxide dismutase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	131669	132634	.	-	.	ID=gene137;Name=CleRt_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00605;old_locus_tag=CleRT_01260
NZ_CP011126.1	Protein Homology	CDS	131669	132634	.	-	0	ID=cds135;Parent=gene137;Dbxref=Genbank:WP_048874804.1;Name=WP_048874804.1;Note=poxA%3B regulates pyruvate oxidase poxB;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770152.1;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_048874804.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	132710	133276	.	-	.	ID=gene138;Name=CleRt_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00610;old_locus_tag=CleRT_01270
NZ_CP011126.1	Protein Homology	CDS	132710	133276	.	-	0	ID=cds136;Parent=gene138;Dbxref=Genbank:WP_048874805.1;Name=WP_048874805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770149.1;product=elongation factor P;protein_id=WP_048874805.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	133320	135296	.	+	.	ID=gene139;Name=CleRt_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00615;old_locus_tag=CleRT_01280
NZ_CP011126.1	Protein Homology	CDS	133320	135296	.	+	0	ID=cds137;Parent=gene139;Dbxref=Genbank:WP_082160490.1;Name=WP_082160490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772175.1;product=primosomal protein N';protein_id=WP_082160490.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	135576	135782	.	-	.	ID=gene140;Name=CleRt_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00620
NZ_CP011126.1	GeneMarkS+	CDS	135576	135782	.	-	0	ID=cds138;Parent=gene140;Dbxref=Genbank:WP_048874807.1;Name=WP_048874807.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874807.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	136533	136829	.	+	.	ID=gene141;Name=CleRt_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00625
NZ_CP011126.1	GeneMarkS+	CDS	136533	136829	.	+	0	ID=cds139;Parent=gene141;Dbxref=Genbank:WP_048874808.1;Name=WP_048874808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874808.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	136869	137054	.	+	.	ID=gene142;Name=CleRt_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00630
NZ_CP011126.1	GeneMarkS+	CDS	136869	137054	.	+	0	ID=cds140;Parent=gene142;Dbxref=Genbank:WP_048874809.1;Name=WP_048874809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874809.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	137979	139085	.	-	.	ID=gene143;Name=CleRt_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00635;old_locus_tag=CleRT_01320
NZ_CP011126.1	Protein Homology	CDS	137979	139085	.	-	0	ID=cds141;Parent=gene143;Dbxref=Genbank:WP_048874810.1;Name=WP_048874810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220810.1;product=DUF3410 domain-containing protein;protein_id=WP_048874810.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	139209	140769	.	+	.	ID=gene144;Name=CleRt_RS00640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00640;old_locus_tag=CleRT_01330;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	139209	140769	.	+	0	ID=cds142;Parent=gene144;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996373.1;product=type I secretion protein TolC;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	140747	141814	.	+	.	ID=gene145;Name=CleRt_RS00645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00645;old_locus_tag=CleRT_01340;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	140747	141814	.	+	0	ID=cds143;Parent=gene145;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958457.1;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	141807	142277	.	+	.	ID=gene146;Name=CleRt_RS00650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00650;old_locus_tag=CleRT_01350;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	141807	142277	.	+	0	ID=cds144;Parent=gene146;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958456.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	142240	143203	.	+	.	ID=gene147;Name=CleRt_RS08670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08670;old_locus_tag=CleRT_01360;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	142240	143203	.	+	0	ID=cds145;Parent=gene147;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252683.1;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	143246	144165	.	-	.	ID=gene148;Name=CleRt_RS08675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08675;old_locus_tag=CleRT_01370;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	143246	144165	.	-	0	ID=cds146;Parent=gene148;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252659.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	144323	144766	.	-	.	ID=gene149;Name=CleRt_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00670;old_locus_tag=CleRT_01380
NZ_CP011126.1	Protein Homology	CDS	144323	144766	.	-	0	ID=cds147;Parent=gene149;Dbxref=Genbank:WP_048875746.1;Name=WP_048875746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958447.1;product=acyl-CoA thioesterase;protein_id=WP_048875746.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	144771	146414	.	-	.	ID=gene150;Name=CleRt_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00675;old_locus_tag=CleRT_01390
NZ_CP011126.1	Protein Homology	CDS	144771	146414	.	-	0	ID=cds148;Parent=gene150;Dbxref=Genbank:WP_082160491.1;Name=WP_082160491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220804.1;product=APC family permease;protein_id=WP_082160491.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	146899	147138	.	-	.	ID=gene151;Name=CleRt_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00680
NZ_CP011126.1	GeneMarkS+	CDS	146899	147138	.	-	0	ID=cds149;Parent=gene151;Dbxref=Genbank:WP_048874813.1;Name=WP_048874813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874813.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	147431	147682	.	-	.	ID=gene152;Name=CleRt_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00685
NZ_CP011126.1	GeneMarkS+	CDS	147431	147682	.	-	0	ID=cds150;Parent=gene152;Dbxref=Genbank:WP_048874814.1;Name=WP_048874814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874814.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	148028	150718	.	+	.	ID=gene153;Name=CleRt_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00690;old_locus_tag=CleRT_01400
NZ_CP011126.1	Protein Homology	CDS	148028	150718	.	+	0	ID=cds151;Parent=gene153;Dbxref=Genbank:WP_048874815.1;Name=WP_048874815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013034278.1;product=DNA polymerase I;protein_id=WP_048874815.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	150705	151821	.	+	.	ID=gene154;Name=CleRt_RS00695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00695;old_locus_tag=CleRT_01410;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	150705	151821	.	+	0	ID=cds152;Parent=gene154;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570106.1;product=thiamine biosynthesis protein ThiF;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	152202	152465	.	+	.	ID=gene155;Name=CleRt_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00700;old_locus_tag=CleRT_01420
NZ_CP011126.1	GeneMarkS+	CDS	152202	152465	.	+	0	ID=cds153;Parent=gene155;Dbxref=Genbank:WP_048874816.1;Name=WP_048874816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874816.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	152946	153185	.	+	.	ID=gene156;Name=CleRt_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00705
NZ_CP011126.1	GeneMarkS+	CDS	152946	153185	.	+	0	ID=cds154;Parent=gene156;Dbxref=Genbank:WP_048874817.1;Name=WP_048874817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874817.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	153360	153560	.	+	.	ID=gene157;Name=CleRt_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00710
NZ_CP011126.1	GeneMarkS+	CDS	153360	153560	.	+	0	ID=cds155;Parent=gene157;Dbxref=Genbank:WP_048874818.1;Name=WP_048874818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874818.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	153656	153922	.	+	.	ID=gene158;Name=CleRt_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00715
NZ_CP011126.1	GeneMarkS+	CDS	153656	153922	.	+	0	ID=cds156;Parent=gene158;Dbxref=Genbank:WP_048874819.1;Name=WP_048874819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874819.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	153937	155154	.	+	.	ID=gene159;Name=CleRt_RS00720;end_range=155154,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00720;old_locus_tag=CleRT_01440;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	153937	155154	.	+	0	ID=cds157;Parent=gene159;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=155154,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220757.1;partial=true;product=ATPase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	155228	156257	.	+	.	ID=gene160;Name=CleRt_RS00725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00725;old_locus_tag=CleRT_01450;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	155228	156257	.	+	0	ID=cds158;Parent=gene160;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569630.1;product=gluconolactonase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	156453	158282	.	-	.	ID=gene161;Name=CleRt_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00730;old_locus_tag=CleRT_01460
NZ_CP011126.1	Protein Homology	CDS	156453	158282	.	-	0	ID=cds159;Parent=gene161;Dbxref=Genbank:WP_048874820.1;Name=WP_048874820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958441.1;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_048874820.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	158872	160884	.	+	.	ID=gene162;Name=CleRt_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00735;old_locus_tag=CleRT_01480
NZ_CP011126.1	Protein Homology	CDS	158872	160884	.	+	0	ID=cds160;Parent=gene162;Dbxref=Genbank:WP_048874821.1;Name=WP_048874821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770076.1;product=transketolase;protein_id=WP_048874821.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	160886	161896	.	+	.	ID=gene163;Name=CleRt_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00740;old_locus_tag=CleRT_01490
NZ_CP011126.1	Protein Homology	CDS	160886	161896	.	+	0	ID=cds161;Parent=gene163;Dbxref=Genbank:WP_048874822.1;Name=WP_048874822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883251.1;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_048874822.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	162013	163188	.	+	.	ID=gene164;Name=CleRt_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00745;old_locus_tag=CleRT_01500
NZ_CP011126.1	Protein Homology	CDS	162013	163188	.	+	0	ID=cds162;Parent=gene164;Dbxref=Genbank:WP_082160492.1;Name=WP_082160492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019867830.1;product=phosphoglycerate kinase;protein_id=WP_082160492.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	163175	164638	.	+	.	ID=gene165;Name=CleRt_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00750;old_locus_tag=CleRT_01510
NZ_CP011126.1	Protein Homology	CDS	163175	164638	.	+	0	ID=cds163;Parent=gene165;Dbxref=Genbank:WP_082160385.1;Name=WP_082160385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958436.1;product=pyruvate kinase;protein_id=WP_082160385.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	164656	165738	.	+	.	ID=gene166;Name=CleRt_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00755;old_locus_tag=CleRT_01520
NZ_CP011126.1	Protein Homology	CDS	164656	165738	.	+	0	ID=cds164;Parent=gene166;Dbxref=Genbank:WP_048874823.1;Name=WP_048874823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770375.1;product=fructose-bisphosphate aldolase class II;protein_id=WP_048874823.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	165954	166154	.	+	.	ID=gene167;Name=CleRt_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00760
NZ_CP011126.1	Protein Homology	CDS	165954	166154	.	+	0	ID=cds165;Parent=gene167;Dbxref=Genbank:WP_048874824.1;Name=WP_048874824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03958.15;product=hypothetical protein;protein_id=WP_048874824.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	166323	166547	.	+	.	ID=gene168;Name=CleRt_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00765
NZ_CP011126.1	Protein Homology	CDS	166323	166547	.	+	0	ID=cds166;Parent=gene168;Dbxref=Genbank:WP_048874825.1;Name=WP_048874825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00263.19;product=hypothetical protein;protein_id=WP_048874825.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	166548	166769	.	+	.	ID=gene169;Name=CleRt_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08680
NZ_CP011126.1	Protein Homology	CDS	166548	166769	.	+	0	ID=cds167;Parent=gene169;Dbxref=Genbank:WP_082160386.1;Name=WP_082160386.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00263.19;product=hypothetical protein;protein_id=WP_082160386.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	166739	167023	.	+	.	ID=gene170;Name=CleRt_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00770
NZ_CP011126.1	Protein Homology	CDS	166739	167023	.	+	0	ID=cds168;Parent=gene170;Dbxref=Genbank:WP_082160387.1;Name=WP_082160387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00263.19;product=hypothetical protein;protein_id=WP_082160387.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	167010	167255	.	+	.	ID=gene171;Name=CleRt_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00775
NZ_CP011126.1	GeneMarkS+	CDS	167010	167255	.	+	0	ID=cds169;Parent=gene171;Dbxref=Genbank:WP_048874827.1;Name=WP_048874827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874827.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	167779	167952	.	+	.	ID=gene172;Name=CleRt_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08685
NZ_CP011126.1	Protein Homology	CDS	167779	167952	.	+	0	ID=cds170;Parent=gene172;Dbxref=Genbank:WP_082160388.1;Name=WP_082160388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00437.18;product=hypothetical protein;protein_id=WP_082160388.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	168225	168548	.	+	.	ID=gene173;Name=CleRt_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08160
NZ_CP011126.1	GeneMarkS+	CDS	168225	168548	.	+	0	ID=cds171;Parent=gene173;Dbxref=Genbank:WP_053097813.1;Name=WP_053097813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097813.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	169363	169773	.	+	.	ID=gene174;Name=CleRt_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08690
NZ_CP011126.1	Protein Homology	CDS	169363	169773	.	+	0	ID=cds172;Parent=gene174;Dbxref=Genbank:WP_082160389.1;Name=WP_082160389.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00482.21;product=hypothetical protein;protein_id=WP_082160389.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	169821	170234	.	+	.	ID=gene175;Name=CleRt_RS00790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00790;old_locus_tag=CleRT_01560;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	169821	170234	.	+	0	ID=cds173;Parent=gene175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018310195.1;product=type II secretion system protein GspG;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	170746	170880	.	+	.	ID=gene176;Name=CleRt_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08695
NZ_CP011126.1	Protein Homology	CDS	170746	170880	.	+	0	ID=cds174;Parent=gene176;Dbxref=Genbank:WP_082160390.1;Name=WP_082160390.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532;product=hypothetical protein;protein_id=WP_082160390.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	171089	171412	.	+	.	ID=gene177;Name=CleRt_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00795
NZ_CP011126.1	Protein Homology	CDS	171089	171412	.	+	0	ID=cds175;Parent=gene177;Dbxref=Genbank:WP_048874828.1;Name=WP_048874828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07963.10;product=prepilin-type cleavage/methylation domain-containing protein;protein_id=WP_048874828.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	171477	171752	.	+	.	ID=gene178;Name=CleRt_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00800
NZ_CP011126.1	GeneMarkS+	CDS	171477	171752	.	+	0	ID=cds176;Parent=gene178;Dbxref=Genbank:WP_048874829.1;Name=WP_048874829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874829.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	172113	172343	.	+	.	ID=gene179;Name=CleRt_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00805
NZ_CP011126.1	Protein Homology	CDS	172113	172343	.	+	0	ID=cds177;Parent=gene179;Dbxref=Genbank:WP_048874830.1;Name=WP_048874830.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03934.11;product=hypothetical protein;protein_id=WP_048874830.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	173107	173655	.	+	.	ID=gene180;Name=CleRt_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00810
NZ_CP011126.1	Protein Homology	CDS	173107	173655	.	+	0	ID=cds178;Parent=gene180;Dbxref=Genbank:WP_048874831.1;Name=WP_048874831.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF12693.5;product=hypothetical protein;protein_id=WP_048874831.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	173663	173857	.	+	.	ID=gene181;Name=CleRt_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00815
NZ_CP011126.1	Protein Homology	CDS	173663	173857	.	+	0	ID=cds179;Parent=gene181;Dbxref=Genbank:WP_048874832.1;Name=WP_048874832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04612.10;product=hypothetical protein;protein_id=WP_048874832.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	173854	174135	.	+	.	ID=gene182;Name=CleRt_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00820
NZ_CP011126.1	GeneMarkS+	CDS	173854	174135	.	+	0	ID=cds180;Parent=gene182;Dbxref=Genbank:WP_048874833.1;Name=WP_048874833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874833.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	174220	174405	.	-	.	ID=gene183;Name=CleRt_RS08700;end_range=174405,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08700;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	174220	174405	.	-	0	ID=cds181;Parent=gene183;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;end_range=174405,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220794.1;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	175206	175814	.	+	.	ID=gene184;Name=CleRt_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00825;old_locus_tag=CleRT_01630
NZ_CP011126.1	Protein Homology	CDS	175206	175814	.	+	0	ID=cds182;Parent=gene184;Dbxref=Genbank:WP_048874834.1;Name=WP_048874834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958433.1;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=WP_048874834.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	176153	177898	.	+	.	ID=gene185;Name=CleRt_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00830;old_locus_tag=CleRT_01640
NZ_CP011126.1	Protein Homology	CDS	176153	177898	.	+	0	ID=cds183;Parent=gene185;Dbxref=Genbank:WP_048874835.1;Name=WP_048874835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772661.1;product=sulfonate ABC transporter permease;protein_id=WP_048874835.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	177895	179217	.	+	.	ID=gene186;Name=CleRt_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00835;old_locus_tag=CleRT_01650
NZ_CP011126.1	Protein Homology	CDS	177895	179217	.	+	0	ID=cds184;Parent=gene186;Dbxref=Genbank:WP_082160391.1;Name=WP_082160391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958431.1;product=nitrate ABC transporter ATP-binding protein;protein_id=WP_082160391.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	179218	179853	.	+	.	ID=gene187;Name=CleRt_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00840;old_locus_tag=CleRT_01660
NZ_CP011126.1	Protein Homology	CDS	179218	179853	.	+	0	ID=cds185;Parent=gene187;Dbxref=Genbank:WP_048874837.1;Name=WP_048874837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996485.1;product=alpha/beta hydrolase;protein_id=WP_048874837.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	181163	181432	.	+	.	ID=gene188;Name=CleRt_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00845;old_locus_tag=CleRT_01680
NZ_CP011126.1	Protein Homology	CDS	181163	181432	.	+	0	ID=cds186;Parent=gene188;Dbxref=Genbank:WP_048874838.1;Name=WP_048874838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011397629.1;product=ferrous iron transport protein A;protein_id=WP_048874838.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	181425	183710	.	+	.	ID=gene189;Name=CleRt_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00850;old_locus_tag=CleRT_01690
NZ_CP011126.1	Protein Homology	CDS	181425	183710	.	+	0	ID=cds187;Parent=gene189;Dbxref=Genbank:WP_048874839.1;Name=WP_048874839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770387.1;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_048874839.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	183728	183955	.	+	.	ID=gene190;Name=CleRt_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00855;old_locus_tag=CleRT_01700
NZ_CP011126.1	Protein Homology	CDS	183728	183955	.	+	0	ID=cds188;Parent=gene190;Dbxref=Genbank:WP_048875750.1;Name=WP_048875750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958427.1;product=hypothetical protein;protein_id=WP_048875750.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	184120	184617	.	+	.	ID=gene191;Name=CleRt_RS00860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00860;old_locus_tag=CleRT_01710;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	184120	184617	.	+	0	ID=cds189;Parent=gene191;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770409.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	184845	185033	.	-	.	ID=gene192;Name=CleRt_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00865
NZ_CP011126.1	GeneMarkS+	CDS	184845	185033	.	-	0	ID=cds190;Parent=gene192;Dbxref=Genbank:WP_048874840.1;Name=WP_048874840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874840.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	185757	186041	.	-	.	ID=gene193;Name=CleRt_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00870;old_locus_tag=CleRT_01720
NZ_CP011126.1	GeneMarkS+	CDS	185757	186041	.	-	0	ID=cds191;Parent=gene193;Dbxref=Genbank:WP_048874841.1;Name=WP_048874841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874841.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	186727	186942	.	+	.	ID=gene194;Name=CleRt_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00875
NZ_CP011126.1	GeneMarkS+	CDS	186727	186942	.	+	0	ID=cds192;Parent=gene194;Dbxref=Genbank:WP_048874842.1;Name=WP_048874842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874842.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	187776	188173	.	-	.	ID=gene195;Name=CleRt_RS08705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08705;old_locus_tag=CleRT_01730;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	187776	188173	.	-	0	ID=cds193;Parent=gene195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771322.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	188506	188937	.	+	.	ID=gene196;Name=CleRt_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00880;old_locus_tag=CleRT_01740
NZ_CP011126.1	Protein Homology	CDS	188506	188937	.	+	0	ID=cds194;Parent=gene196;Dbxref=Genbank:WP_048875751.1;Name=WP_048875751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015432456.1;product=50S ribosomal protein L13;protein_id=WP_048875751.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	188953	189372	.	+	.	ID=gene197;Name=CleRt_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00885;old_locus_tag=CleRT_01750
NZ_CP011126.1	Protein Homology	CDS	188953	189372	.	+	0	ID=cds195;Parent=gene197;Dbxref=Genbank:WP_048874843.1;Name=WP_048874843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770424.1;product=30S ribosomal protein S9;protein_id=WP_048874843.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	189400	190026	.	+	.	ID=gene198;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=CleRt_RS00890;old_locus_tag=CleRT_01760
NZ_CP011126.1	Protein Homology	CDS	189400	190026	.	+	0	ID=cds196;Parent=gene198;Dbxref=Genbank:WP_082160392.1;Name=WP_082160392.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770426.1;product=stringent starvation protein A;protein_id=WP_082160392.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	190040	190432	.	+	.	ID=gene199;Name=CleRt_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00895;old_locus_tag=CleRT_01770
NZ_CP011126.1	Protein Homology	CDS	190040	190432	.	+	0	ID=cds197;Parent=gene199;Dbxref=Genbank:WP_048875752.1;Name=WP_048875752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958412.1;product=ClpXP protease specificity-enhancing factor;protein_id=WP_048875752.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	190462	191136	.	+	.	ID=gene200;Name=CleRt_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00900;old_locus_tag=CleRT_01780
NZ_CP011126.1	Protein Homology	CDS	190462	191136	.	+	0	ID=cds198;Parent=gene200;Dbxref=Genbank:WP_048874845.1;Name=WP_048874845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253009.1;product=site-2 protease family protein;protein_id=WP_048874845.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	191151	191726	.	-	.	ID=gene201;Name=CleRt_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00905;old_locus_tag=CleRT_01790
NZ_CP011126.1	Protein Homology	CDS	191151	191726	.	-	0	ID=cds199;Parent=gene201;Dbxref=Genbank:WP_048874846.1;Name=WP_048874846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772861.1;product=BON domain-containing protein;protein_id=WP_048874846.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	191766	192359	.	-	.	ID=gene202;Name=CleRt_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00910;old_locus_tag=CleRT_01800
NZ_CP011126.1	Protein Homology	CDS	191766	192359	.	-	0	ID=cds200;Parent=gene202;Dbxref=Genbank:WP_048874847.1;Name=WP_048874847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220776.1;product=phosphoheptose isomerase;protein_id=WP_048874847.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	192381	192744	.	-	.	ID=gene203;Name=CleRt_RS08710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08710;old_locus_tag=CleRT_01810;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	192381	192744	.	-	0	ID=cds201;Parent=gene203;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772860.1;product=YraN family protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	192803	193926	.	-	.	ID=gene204;Name=CleRt_RS00915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00915;old_locus_tag=CleRT_01820;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	192803	193926	.	-	0	ID=cds202;Parent=gene204;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770438.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	193972	194826	.	+	.	ID=gene205;Name=CleRt_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00920;old_locus_tag=CleRT_01830
NZ_CP011126.1	Protein Homology	CDS	193972	194826	.	+	0	ID=cds203;Parent=gene205;Dbxref=Genbank:WP_048874848.1;Name=WP_048874848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005697288.1;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_048874848.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	194792	195130	.	-	.	ID=gene206;Name=CleRt_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00925;old_locus_tag=CleRT_01840
NZ_CP011126.1	Protein Homology	CDS	194792	195130	.	-	0	ID=cds204;Parent=gene206;Dbxref=Genbank:WP_048874849.1;Name=WP_048874849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770443.1;product=integration host factor subunit beta;protein_id=WP_048874849.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	195268	195946	.	-	.	ID=gene207;Name=CleRt_RS08715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08715;old_locus_tag=CleRT_01850;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	195268	195946	.	-	0	ID=cds205;Parent=gene207;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220775.1;product=phosphoribosylglycinamide formyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	196004	196917	.	-	.	ID=gene208;Name=CleRt_RS00930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00930;old_locus_tag=CleRT_01860;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	196004	196917	.	-	0	ID=cds206;Parent=gene208;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011859995.1;product=phosphoribosylformylglycinamidine cyclo-ligase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	197074	198179	.	+	.	ID=gene209;Name=CleRt_RS00935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00935;old_locus_tag=CleRT_01870;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	197074	198179	.	+	0	ID=cds207;Parent=gene209;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569599.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	198182	198904	.	+	.	ID=gene210;Name=CleRt_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00940;old_locus_tag=CleRT_01880
NZ_CP011126.1	Protein Homology	CDS	198182	198904	.	+	0	ID=cds208;Parent=gene210;Dbxref=Genbank:WP_048874850.1;Name=WP_048874850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569598.1;product=DnaA regulatory inactivator Hda;protein_id=WP_048874850.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	198889	199224	.	-	.	ID=gene211;Name=CleRt_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00945
NZ_CP011126.1	GeneMarkS+	CDS	198889	199224	.	-	0	ID=cds209;Parent=gene211;Dbxref=Genbank:WP_048874851.1;Name=WP_048874851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874851.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	199648	199860	.	+	.	ID=gene212;Name=CleRt_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00950
NZ_CP011126.1	GeneMarkS+	CDS	199648	199860	.	+	0	ID=cds210;Parent=gene212;Dbxref=Genbank:WP_048874852.1;Name=WP_048874852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874852.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	200507	200767	.	-	.	ID=gene213;Name=CleRt_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00955
NZ_CP011126.1	GeneMarkS+	CDS	200507	200767	.	-	0	ID=cds211;Parent=gene213;Dbxref=Genbank:WP_048874853.1;Name=WP_048874853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874853.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	200953	202143	.	-	.	ID=gene214;Name=CleRt_RS00960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00960;old_locus_tag=CleRT_01900;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	200953	202143	.	-	0	ID=cds212;Parent=gene214;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770455.1;product=3-phosphoglycerate dehydrogenase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	203596	204429	.	+	.	ID=gene215;Name=CleRt_RS00965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00965;old_locus_tag=CleRT_01920;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	203596	204429	.	+	0	ID=cds213;Parent=gene215;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958400.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	204467	205316	.	+	.	ID=gene216;Name=CleRt_RS00970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS00970;old_locus_tag=CleRT_01930;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	204467	205316	.	+	0	ID=cds214;Parent=gene216;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007231158.1;product=coproporphyrinogen III oxidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	205443	206024	.	+	.	ID=gene217;Name=CleRt_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00975;old_locus_tag=CleRT_01940
NZ_CP011126.1	Protein Homology	CDS	205443	206024	.	+	0	ID=cds215;Parent=gene217;Dbxref=Genbank:WP_048874854.1;Name=WP_048874854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772856.1;product=nicotinamide riboside transporter PnuC;protein_id=WP_048874854.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	206237	206512	.	-	.	ID=gene218;Name=CleRt_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00980
NZ_CP011126.1	GeneMarkS+	CDS	206237	206512	.	-	0	ID=cds216;Parent=gene218;Dbxref=Genbank:WP_048874855.1;Name=WP_048874855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874855.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	207108	208124	.	+	.	ID=gene219;Name=CleRt_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00985;old_locus_tag=CleRT_01960
NZ_CP011126.1	Protein Homology	CDS	207108	208124	.	+	0	ID=cds217;Parent=gene219;Dbxref=Genbank:WP_048874856.1;Name=WP_048874856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569595.1;product=ornithine cyclodeaminase;protein_id=WP_048874856.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	208350	209693	.	-	.	ID=gene220;Name=CleRt_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00990;old_locus_tag=CleRT_01970
NZ_CP011126.1	Protein Homology	CDS	208350	209693	.	-	0	ID=cds218;Parent=gene220;Dbxref=Genbank:WP_048874857.1;Name=WP_048874857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770466.1;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_048874857.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	209706	210176	.	-	.	ID=gene221;Name=CleRt_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS00995;old_locus_tag=CleRT_01980
NZ_CP011126.1	Protein Homology	CDS	209706	210176	.	-	0	ID=cds219;Parent=gene221;Dbxref=Genbank:WP_048874858.1;Name=WP_048874858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770468.1;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_048874858.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	210512	211560	.	-	.	ID=gene222;Name=CleRt_RS08720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08720;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	210512	211560	.	-	0	ID=cds220;Parent=gene222;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770485.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	211779	211982	.	-	.	ID=gene223;Name=CleRt_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08725
NZ_CP011126.1	Protein Homology	CDS	211779	211982	.	-	0	ID=cds221;Parent=gene223;Dbxref=Genbank:WP_082160393.1;Name=WP_082160393.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11412.6;product=hypothetical protein;protein_id=WP_082160393.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	211936	212265	.	-	.	ID=gene224;Name=CleRt_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01005
NZ_CP011126.1	Protein Homology	CDS	211936	212265	.	-	0	ID=cds222;Parent=gene224;Dbxref=Genbank:WP_048874860.1;Name=WP_048874860.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11412.6;product=hypothetical protein;protein_id=WP_048874860.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	212295	212606	.	-	.	ID=gene225;Name=CleRt_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01010
NZ_CP011126.1	GeneMarkS+	CDS	212295	212606	.	-	0	ID=cds223;Parent=gene225;Dbxref=Genbank:WP_048874861.1;Name=WP_048874861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874861.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	212617	212805	.	-	.	ID=gene226;Name=CleRt_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01015
NZ_CP011126.1	GeneMarkS+	CDS	212617	212805	.	-	0	ID=cds224;Parent=gene226;Dbxref=Genbank:WP_048874862.1;Name=WP_048874862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874862.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	213947	216625	.	-	.	ID=gene227;Name=CleRt_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01020;old_locus_tag=CleRT_02010
NZ_CP011126.1	Protein Homology	CDS	213947	216625	.	-	0	ID=cds225;Parent=gene227;Dbxref=Genbank:WP_048874863.1;Name=WP_048874863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772907.1;product=aconitate hydratase AcnA;protein_id=WP_048874863.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	216904	217194	.	+	.	ID=gene228;Name=CleRt_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01025;old_locus_tag=CleRT_02020
NZ_CP011126.1	Protein Homology	CDS	216904	217194	.	+	0	ID=cds226;Parent=gene228;Dbxref=Genbank:WP_048874864.1;Name=WP_048874864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006870686.1;product=co-chaperone GroES;protein_id=WP_048874864.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	217226	218881	.	+	.	ID=gene229;Name=CleRt_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01030;old_locus_tag=CleRT_02030
NZ_CP011126.1	Protein Homology	CDS	217226	218881	.	+	0	ID=cds227;Parent=gene229;Dbxref=Genbank:WP_048874865.1;Name=WP_048874865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220765.1;product=chaperonin GroEL;protein_id=WP_048874865.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	218998	220083	.	+	.	ID=gene230;Name=CleRt_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01035;old_locus_tag=CleRT_02040
NZ_CP011126.1	Protein Homology	CDS	218998	220083	.	+	0	ID=cds228;Parent=gene230;Dbxref=Genbank:WP_048874866.1;Name=WP_048874866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012326556.1;product=glycine cleavage system protein T;protein_id=WP_048874866.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	220095	220484	.	+	.	ID=gene231;Name=CleRt_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01040;old_locus_tag=CleRT_02050
NZ_CP011126.1	Protein Homology	CDS	220095	220484	.	+	0	ID=cds229;Parent=gene231;Dbxref=Genbank:WP_048874867.1;Name=WP_048874867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770508.1;product=glycine cleavage system protein H;protein_id=WP_048874867.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	220484	221866	.	+	.	ID=gene232;Name=CleRt_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01045;old_locus_tag=CleRT_02060
NZ_CP011126.1	Protein Homology	CDS	220484	221866	.	+	0	ID=cds230;Parent=gene232;Dbxref=Genbank:WP_048874868.1;Name=WP_048874868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011111235.1;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_048874868.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	221872	223386	.	+	.	ID=gene233;Name=CleRt_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01050;old_locus_tag=CleRT_02070
NZ_CP011126.1	Protein Homology	CDS	221872	223386	.	+	0	ID=cds231;Parent=gene233;Dbxref=Genbank:WP_048874869.1;Name=WP_048874869.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine%3B forms a heterodimer with subunit 1 to form the P protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958389.1;product=glycine dehydrogenase (aminomethyl-transferring);protein_id=WP_048874869.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	223402	223722	.	+	.	ID=gene234;Name=CleRt_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01055;old_locus_tag=CleRT_02080
NZ_CP011126.1	GeneMarkS+	CDS	223402	223722	.	+	0	ID=cds232;Parent=gene234;Dbxref=Genbank:WP_048874870.1;Name=WP_048874870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874870.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	223753	224478	.	-	.	ID=gene235;Name=CleRt_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01060;old_locus_tag=CleRT_02090
NZ_CP011126.1	Protein Homology	CDS	223753	224478	.	-	0	ID=cds233;Parent=gene235;Dbxref=Genbank:WP_048874871.1;Name=WP_048874871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007543747.1;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_048874871.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	224475	225059	.	-	.	ID=gene236;Name=CleRt_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01065;old_locus_tag=CleRT_02100
NZ_CP011126.1	Protein Homology	CDS	224475	225059	.	-	0	ID=cds234;Parent=gene236;Dbxref=Genbank:WP_048874872.1;Name=WP_048874872.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252695.1;product=superoxide dismutase;protein_id=WP_048874872.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	225386	225991	.	+	.	ID=gene237;Name=CleRt_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01070;old_locus_tag=CleRT_02110
NZ_CP011126.1	Protein Homology	CDS	225386	225991	.	+	0	ID=cds235;Parent=gene237;Dbxref=Genbank:WP_048874873.1;Name=WP_048874873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569570.1;product=peroxiredoxin;protein_id=WP_048874873.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	226215	226907	.	-	.	ID=gene238;Name=CleRt_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01075;old_locus_tag=CleRT_02120
NZ_CP011126.1	Protein Homology	CDS	226215	226907	.	-	0	ID=cds236;Parent=gene238;Dbxref=Genbank:WP_048874874.1;Name=WP_048874874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010652162.1;product=ribonuclease T;protein_id=WP_048874874.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	226931	227977	.	-	.	ID=gene239;Name=CleRt_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01080;old_locus_tag=CleRT_02130
NZ_CP011126.1	Protein Homology	CDS	226931	227977	.	-	0	ID=cds237;Parent=gene239;Dbxref=Genbank:WP_048874875.1;Name=WP_048874875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010640075.1;product=dihydroorotase;protein_id=WP_048874875.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	229232	229732	.	+	.	ID=gene240;Name=CleRt_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08165
NZ_CP011126.1	GeneMarkS+	CDS	229232	229732	.	+	0	ID=cds238;Parent=gene240;Dbxref=Genbank:WP_053097815.1;Name=WP_053097815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097815.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	229841	230272	.	-	.	ID=gene241;Name=CleRt_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01090;old_locus_tag=CleRT_02150
NZ_CP011126.1	Protein Homology	CDS	229841	230272	.	-	0	ID=cds239;Parent=gene241;Dbxref=Genbank:WP_082160493.1;Name=WP_082160493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019215791.1;product=DUF1841 domain-containing protein;protein_id=WP_082160493.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	230272	230910	.	-	.	ID=gene242;Name=CleRt_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01095;old_locus_tag=CleRT_02160
NZ_CP011126.1	Protein Homology	CDS	230272	230910	.	-	0	ID=cds240;Parent=gene242;Dbxref=Genbank:WP_048874877.1;Name=WP_048874877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006035237.1;product=endonuclease III;protein_id=WP_048874877.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	230907	231539	.	-	.	ID=gene243;Name=CleRt_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01100;old_locus_tag=CleRT_02170
NZ_CP011126.1	Protein Homology	CDS	230907	231539	.	-	0	ID=cds241;Parent=gene243;Dbxref=Genbank:WP_048874878.1;Name=WP_048874878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772219.1;product=4Fe-4S ferredoxin;protein_id=WP_048874878.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	231536	233173	.	-	.	ID=gene244;Name=CleRt_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01105;old_locus_tag=CleRT_02180
NZ_CP011126.1	Protein Homology	CDS	231536	233173	.	-	0	ID=cds242;Parent=gene244;Dbxref=Genbank:WP_048874879.1;Name=WP_048874879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569713.1;product=methionine--tRNA ligase;protein_id=WP_048874879.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	233310	234197	.	+	.	ID=gene245;Name=CleRt_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01110;old_locus_tag=CleRT_02190
NZ_CP011126.1	Protein Homology	CDS	233310	234197	.	+	0	ID=cds243;Parent=gene245;Dbxref=Genbank:WP_048874880.1;Name=WP_048874880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770555.1;product=ATP-binding protein;protein_id=WP_048874880.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	234197	234763	.	+	.	ID=gene246;Name=CleRt_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01115;old_locus_tag=CleRT_02200
NZ_CP011126.1	Protein Homology	CDS	234197	234763	.	+	0	ID=cds244;Parent=gene246;Dbxref=Genbank:WP_048874881.1;Name=WP_048874881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770557.1;product=dCTP deaminase;protein_id=WP_048874881.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	235011	236678	.	+	.	ID=gene247;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=CleRt_RS01120;old_locus_tag=CleRT_02210
NZ_CP011126.1	Protein Homology	CDS	235011	236678	.	+	0	ID=cds245;Parent=gene247;Dbxref=Genbank:WP_048874882.1;Name=WP_048874882.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009286776.1;product=CTP synthase;protein_id=WP_048874882.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	236826	237683	.	+	.	ID=gene248;Name=CleRt_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01125;old_locus_tag=CleRT_02220
NZ_CP011126.1	Protein Homology	CDS	236826	237683	.	+	0	ID=cds246;Parent=gene248;Dbxref=Genbank:WP_048874883.1;Name=WP_048874883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020562890.1;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_048874883.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	237778	239052	.	+	.	ID=gene249;Name=CleRt_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01130;old_locus_tag=CleRT_02230
NZ_CP011126.1	Protein Homology	CDS	237778	239052	.	+	0	ID=cds247;Parent=gene249;Dbxref=Genbank:WP_048874884.1;Name=WP_048874884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996523.1;product=phosphopyruvate hydratase;protein_id=WP_048874884.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	239071	239343	.	+	.	ID=gene250;Name=CleRt_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01135;old_locus_tag=CleRT_02240
NZ_CP011126.1	Protein Homology	CDS	239071	239343	.	+	0	ID=cds248;Parent=gene250;Dbxref=Genbank:WP_048874885.1;Name=WP_048874885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770584.1;product=cell division protein FtsB;protein_id=WP_048874885.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	239518	240294	.	+	.	ID=gene251;Name=CleRt_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01140;old_locus_tag=CleRT_02250
NZ_CP011126.1	Protein Homology	CDS	239518	240294	.	+	0	ID=cds249;Parent=gene251;Dbxref=Genbank:WP_082160394.1;Name=WP_082160394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770587.1;product=5'/3'-nucleotidase SurE;protein_id=WP_082160394.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	240353	241024	.	+	.	ID=gene252;Name=CleRt_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01145;old_locus_tag=CleRT_02260
NZ_CP011126.1	Protein Homology	CDS	240353	241024	.	+	0	ID=cds250;Parent=gene252;Dbxref=Genbank:WP_048875754.1;Name=WP_048875754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013716394.1;product=peptidase;protein_id=WP_048875754.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	241062	242135	.	+	.	ID=gene253;Name=CleRt_RS01155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01155;old_locus_tag=CleRT_02270;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	241062	242135	.	+	0	ID=cds251;Parent=gene253;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958362.1;product=RNA polymerase sigma factor RpoS;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	242171	242724	.	-	.	ID=gene254;Name=CleRt_RS01160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01160;old_locus_tag=CleRT_02280;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	242171	242724	.	-	0	ID=cds252;Parent=gene254;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252868.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	242902	243126	.	+	.	ID=gene255;Name=CleRt_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01165;old_locus_tag=CleRT_02290
NZ_CP011126.1	Protein Homology	CDS	242902	243126	.	+	0	ID=cds253;Parent=gene255;Dbxref=Genbank:WP_048875755.1;Name=WP_048875755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996529.1;product=zinc-finger domain-containing protein;protein_id=WP_048875755.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	243130	244170	.	+	.	ID=gene256;Name=CleRt_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01170;old_locus_tag=CleRT_02300
NZ_CP011126.1	Protein Homology	CDS	243130	244170	.	+	0	ID=cds254;Parent=gene256;Dbxref=Genbank:WP_048874887.1;Name=WP_048874887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770604.1;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_048874887.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	244137	244350	.	-	.	ID=gene257;Name=CleRt_RS08730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08730;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	244137	244350	.	-	0	ID=cds255;Parent=gene257;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004582198.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	245292	245492	.	+	.	ID=gene258;Name=CleRt_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01175
NZ_CP011126.1	Protein Homology	CDS	245292	245492	.	+	0	ID=cds256;Parent=gene258;Dbxref=Genbank:WP_048874888.1;Name=WP_048874888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01149.22;product=hypothetical protein;protein_id=WP_048874888.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	245473	245757	.	+	.	ID=gene259;Name=CleRt_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01180
NZ_CP011126.1	Protein Homology	CDS	245473	245757	.	+	0	ID=cds257;Parent=gene259;Dbxref=Genbank:WP_082160395.1;Name=WP_082160395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01149.22;product=hypothetical protein;protein_id=WP_082160395.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	245813	246115	.	+	.	ID=gene260;Name=CleRt_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01185
NZ_CP011126.1	Protein Homology	CDS	245813	246115	.	+	0	ID=cds258;Parent=gene260;Dbxref=Genbank:WP_082160396.1;Name=WP_082160396.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06831.12;product=hypothetical protein;protein_id=WP_082160396.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	246169	247374	.	-	.	ID=gene261;Name=CleRt_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01190;old_locus_tag=CleRT_02330
NZ_CP011126.1	Protein Homology	CDS	246169	247374	.	-	0	ID=cds259;Parent=gene261;Dbxref=Genbank:WP_048874891.1;Name=WP_048874891.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04932.13;product=ligase;protein_id=WP_048874891.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	247450	248544	.	+	.	ID=gene262;Name=CleRt_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01195;old_locus_tag=CleRT_02340
NZ_CP011126.1	Protein Homology	CDS	247450	248544	.	+	0	ID=cds260;Parent=gene262;Dbxref=Genbank:WP_048874892.1;Name=WP_048874892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569725.1;product=glycosyltransferase family 1 protein;protein_id=WP_048874892.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	248559	249338	.	+	.	ID=gene263;Name=CleRt_RS01200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01200;old_locus_tag=CleRT_02350;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	248559	249338	.	+	0	ID=cds261;Parent=gene263;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016209921.1;product=alpha-L-glycero-D-manno-heptose beta-1%2C4-glucosyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	249392	249667	.	-	.	ID=gene264;Name=CleRt_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01205;old_locus_tag=CleRT_02360
NZ_CP011126.1	Protein Homology	CDS	249392	249667	.	-	0	ID=cds262;Parent=gene264;Dbxref=Genbank:WP_048874893.1;Name=WP_048874893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771880.1;product=hypothetical protein;protein_id=WP_048874893.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	250107	250532	.	-	.	ID=gene265;Name=CleRt_RS08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08735;old_locus_tag=CleRT_02370;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	250107	250532	.	-	0	ID=cds263;Parent=gene265;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957720.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	250785	252221	.	+	.	ID=gene266;Name=CleRt_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01210;old_locus_tag=CleRT_02380
NZ_CP011126.1	Protein Homology	CDS	250785	252221	.	+	0	ID=cds264;Parent=gene266;Dbxref=Genbank:WP_048874894.1;Name=WP_048874894.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220737.1;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_048874894.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	252218	253201	.	+	.	ID=gene267;Name=CleRt_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01215;old_locus_tag=CleRT_02390
NZ_CP011126.1	Protein Homology	CDS	252218	253201	.	+	0	ID=cds265;Parent=gene267;Dbxref=Genbank:WP_048874895.1;Name=WP_048874895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019934493.1;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_048874895.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	253448	253696	.	-	.	ID=gene268;Name=CleRt_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01220
NZ_CP011126.1	GeneMarkS+	CDS	253448	253696	.	-	0	ID=cds266;Parent=gene268;Dbxref=Genbank:WP_048874896.1;Name=WP_048874896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874896.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	253813	254958	.	-	.	ID=gene269;Name=CleRt_RS01225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01225;old_locus_tag=CleRT_02410;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	253813	254958	.	-	0	ID=cds267;Parent=gene269;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769552.1;product=phosphoesterase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	255224	255421	.	-	.	ID=gene270;Name=CleRt_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01230
NZ_CP011126.1	GeneMarkS+	CDS	255224	255421	.	-	0	ID=cds268;Parent=gene270;Dbxref=Genbank:WP_048874897.1;Name=WP_048874897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874897.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	255418	255896	.	-	.	ID=gene271;Name=CleRt_RS01235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01235;old_locus_tag=CleRT_02430;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	255418	255896	.	-	0	ID=cds269;Parent=gene271;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569732.1;product=phosphoesterase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	256119	256562	.	+	.	ID=gene272;Name=CleRt_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01240;old_locus_tag=CleRT_02440
NZ_CP011126.1	Protein Homology	CDS	256119	256562	.	+	0	ID=cds270;Parent=gene272;Dbxref=Genbank:WP_048874898.1;Name=WP_048874898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769562.1;product=hypothetical protein;protein_id=WP_048874898.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	257040	257306	.	+	.	ID=gene273;Name=CleRt_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08170
NZ_CP011126.1	GeneMarkS+	CDS	257040	257306	.	+	0	ID=cds271;Parent=gene273;Dbxref=Genbank:WP_053097817.1;Name=WP_053097817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097817.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	257335	257652	.	+	.	ID=gene274;Name=CleRt_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08175
NZ_CP011126.1	GeneMarkS+	CDS	257335	257652	.	+	0	ID=cds272;Parent=gene274;Dbxref=Genbank:WP_053097819.1;Name=WP_053097819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097819.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	258165	258467	.	+	.	ID=gene275;Name=CleRt_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08180
NZ_CP011126.1	GeneMarkS+	CDS	258165	258467	.	+	0	ID=cds273;Parent=gene275;Dbxref=Genbank:WP_053097821.1;Name=WP_053097821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097821.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	258791	259057	.	-	.	ID=gene276;Name=CleRt_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01250
NZ_CP011126.1	GeneMarkS+	CDS	258791	259057	.	-	0	ID=cds274;Parent=gene276;Dbxref=Genbank:WP_048874899.1;Name=WP_048874899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874899.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	259615	259983	.	-	.	ID=gene277;Name=CleRt_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01255
NZ_CP011126.1	GeneMarkS+	CDS	259615	259983	.	-	0	ID=cds275;Parent=gene277;Dbxref=Genbank:WP_048874900.1;Name=WP_048874900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874900.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	261024	262144	.	-	.	ID=gene278;Name=CleRt_RS01260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01260;old_locus_tag=CleRT_02470;partial=true;pseudo=true;start_range=.,261024
NZ_CP011126.1	Protein Homology	CDS	261024	262144	.	-	0	ID=cds276;Parent=gene278;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769572.1;partial=true;product=Dot/Icm secretion system ATPase DotB;pseudo=true;start_range=.,261024;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	262255	263084	.	-	.	ID=gene279;Name=CleRt_RS01265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01265;old_locus_tag=CleRT_02480;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	262255	263084	.	-	0	ID=cds277;Parent=gene279;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569735.1;product=type IV secretion system protein DotC;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	263117	263504	.	-	.	ID=gene280;Name=CleRt_RS08185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08185;old_locus_tag=CleRT_02490;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	263117	263504	.	-	0	ID=cds278;Parent=gene280;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769575.1;product=LuxR family transcriptional regulator;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	263668	264004	.	-	.	ID=gene281;Name=CleRt_RS01275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01275;old_locus_tag=CleRT_02500;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	263668	264004	.	-	0	ID=cds279;Parent=gene281;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569736.1;product=type IV secretion protein IcmS;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	264571	265294	.	+	.	ID=gene282;Name=CleRt_RS01280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01280;old_locus_tag=CleRT_02520;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	264571	265294	.	+	0	ID=cds280;Parent=gene282;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772730.1;product=Dot/Icm secretion system protein IcmQ;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	265294	266470	.	+	.	ID=gene283;Name=CleRt_RS01285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01285;old_locus_tag=CleRT_02530;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	265294	266470	.	+	0	ID=cds281;Parent=gene283;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996542.1;product=phosphoesterase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	266446	268468	.	+	.	ID=gene284;Name=CleRt_RS01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01290;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	266446	268468	.	+	0	ID=cds282;Parent=gene284;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769598.1;product=phosphoesterase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	268622	269133	.	+	.	ID=gene285;Name=CleRt_RS01300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01300;old_locus_tag=CleRT_02550;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	268622	269133	.	+	0	ID=cds283;Parent=gene285;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769601.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	269142	269757	.	+	.	ID=gene286;Name=CleRt_RS01305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01305;old_locus_tag=CleRT_02560;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	269142	269757	.	+	0	ID=cds284;Parent=gene286;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769604.1;product=type IV secretion protein IcmL;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	269771	270443	.	+	.	ID=gene287;Name=CleRt_RS01310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01310;old_locus_tag=CleRT_02570;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	269771	270443	.	+	0	ID=cds285;Parent=gene287;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958336.1;product=type IV secretion protein IcmL;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	270487	271542	.	+	.	ID=gene288;Name=CleRt_RS08190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08190;old_locus_tag=CleRT_02580;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	270487	271542	.	+	0	ID=cds286;Parent=gene288;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220727.1;product=type IV secretion protein IcmK;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	271529	273381	.	+	.	ID=gene289;Name=CleRt_RS08740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08740;old_locus_tag=CleRT_02590;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	271529	273381	.	+	0	ID=cds287;Parent=gene289;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958334.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	273409	274124	.	+	.	ID=gene290;Name=CleRt_RS01335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01335;old_locus_tag=CleRT_02600;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	273409	274124	.	+	0	ID=cds288;Parent=gene290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958333.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	274243	274737	.	+	.	ID=gene291;Name=CleRt_RS08745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08745;old_locus_tag=CleRT_02610;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	274243	274737	.	+	0	ID=cds289;Parent=gene291;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958332.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	275080	275319	.	+	.	ID=gene292;Name=CleRt_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01340
NZ_CP011126.1	GeneMarkS+	CDS	275080	275319	.	+	0	ID=cds290;Parent=gene292;Dbxref=Genbank:WP_048874905.1;Name=WP_048874905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874905.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	275470	276150	.	+	.	ID=gene293;Name=CleRt_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01345;old_locus_tag=CleRT_02620
NZ_CP011126.1	GeneMarkS+	CDS	275470	276150	.	+	0	ID=cds291;Parent=gene293;Dbxref=Genbank:WP_048874906.1;Name=WP_048874906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874906.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	277070	277435	.	+	.	ID=gene294;Name=CleRt_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01350;old_locus_tag=CleRT_02630
NZ_CP011126.1	GeneMarkS+	CDS	277070	277435	.	+	0	ID=cds292;Parent=gene294;Dbxref=Genbank:WP_048874907.1;Name=WP_048874907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874907.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	278178	278590	.	+	.	ID=gene295;Name=CleRt_RS01355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01355;old_locus_tag=CleRT_02640;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	278178	278590	.	+	0	ID=cds293;Parent=gene295;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996546.1;product=type IV secretion protein IcmD;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	278626	279163	.	+	.	ID=gene296;Name=CleRt_RS01360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01360;old_locus_tag=CleRT_02650;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	278626	279163	.	+	0	ID=cds294;Parent=gene296;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769617.1;product=HNH endonuclease;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	279169	281856	.	+	.	ID=gene297;Name=CleRt_RS01365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01365;old_locus_tag=CleRT_02660;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	279169	281856	.	+	0	ID=cds295;Parent=gene297;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958330.1;product=type IV secretion protein IcmB;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	282069	282257	.	-	.	ID=gene298;Name=CleRt_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08750
NZ_CP011126.1	Protein Homology	CDS	282069	282257	.	-	0	ID=cds296;Parent=gene298;Dbxref=Genbank:WP_082160494.1;Name=WP_082160494.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00550.23;product=hypothetical protein;protein_id=WP_082160494.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	284452	284667	.	-	.	ID=gene299;Name=CleRt_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01370
NZ_CP011126.1	GeneMarkS+	CDS	284452	284667	.	-	0	ID=cds297;Parent=gene299;Dbxref=Genbank:WP_048874908.1;Name=WP_048874908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874908.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	284657	285094	.	-	.	ID=gene300;Name=CleRt_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01375
NZ_CP011126.1	Protein Homology	CDS	284657	285094	.	-	0	ID=cds298;Parent=gene300;Dbxref=Genbank:WP_082160397.1;Name=WP_082160397.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00155.19;product=hypothetical protein;protein_id=WP_082160397.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	285713	287837	.	-	.	ID=gene301;Name=CleRt_RS01380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01380;old_locus_tag=CleRT_02690;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	285713	287837	.	-	0	ID=cds299;Parent=gene301;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769640.1;product=mechanosensitive ion channel protein MscS;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	288308	288499	.	+	.	ID=gene302;Name=CleRt_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01385
NZ_CP011126.1	GeneMarkS+	CDS	288308	288499	.	+	0	ID=cds300;Parent=gene302;Dbxref=Genbank:WP_048874910.1;Name=WP_048874910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874910.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	288713	288922	.	+	.	ID=gene303;Name=CleRt_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08755
NZ_CP011126.1	GeneMarkS+	CDS	288713	288922	.	+	0	ID=cds301;Parent=gene303;Dbxref=Genbank:WP_082160398.1;Name=WP_082160398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160398.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	288863	289074	.	-	.	ID=gene304;Name=CleRt_RS01390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01390;old_locus_tag=CleRT_02710;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	288863	289074	.	-	0	ID=cds302;Parent=gene304;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570890.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	290033	290106	.	+	.	ID=gene305;Name=CleRt_RS01395;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS01395;old_locus_tag=CleRT_t003
NZ_CP011126.1	tRNAscan-SE	tRNA	290033	290106	.	+	.	ID=rna2;Parent=gene305;anticodon=(pos:290067..290069);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Met
NZ_CP011126.1	tRNAscan-SE	exon	290033	290106	.	+	.	ID=id3;Parent=rna2;anticodon=(pos:290067..290069);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Met
NZ_CP011126.1	RefSeq	pseudogene	290229	291289	.	+	.	ID=gene306;Name=CleRt_RS08760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08760;old_locus_tag=CleRT_02730;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	290229	291289	.	+	0	ID=cds303;Parent=gene306;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013452059.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	291334	293451	.	-	.	ID=gene307;Name=CleRt_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01410;old_locus_tag=CleRT_02740
NZ_CP011126.1	Protein Homology	CDS	291334	293451	.	-	0	ID=cds304;Parent=gene307;Dbxref=Genbank:WP_048874914.1;Name=WP_048874914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772130.1;product=RNA polymerase sigma factor RpoD;protein_id=WP_048874914.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	293599	295302	.	-	.	ID=gene308;Name=CleRt_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01415;old_locus_tag=CleRT_02750
NZ_CP011126.1	Protein Homology	CDS	293599	295302	.	-	0	ID=cds305;Parent=gene308;Dbxref=Genbank:WP_048874915.1;Name=WP_048874915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772129.1;product=DNA primase;protein_id=WP_048874915.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	295654	295770	.	-	.	ID=gene309;Name=CleRt_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08765
NZ_CP011126.1	Protein Homology	CDS	295654	295770	.	-	0	ID=cds306;Parent=gene309;Dbxref=Genbank:WP_082160495.1;Name=WP_082160495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09424.8;product=hypothetical protein;protein_id=WP_082160495.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	295915	296139	.	-	.	ID=gene310;Name=CleRt_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01420;old_locus_tag=CleRT_02770
NZ_CP011126.1	Protein Homology	CDS	295915	296139	.	-	0	ID=cds307;Parent=gene310;Dbxref=Genbank:WP_048874916.1;Name=WP_048874916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772127.1;product=30S ribosomal protein S21;protein_id=WP_048874916.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	296371	296693	.	+	.	ID=gene311;Name=CleRt_RS01425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01425;old_locus_tag=CleRT_02780;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	296371	296693	.	+	0	ID=cds308;Parent=gene311;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220714.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	296791	297987	.	+	.	ID=gene312;Name=CleRt_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01430;old_locus_tag=CleRT_02790
NZ_CP011126.1	Protein Homology	CDS	296791	297987	.	+	0	ID=cds309;Parent=gene312;Dbxref=Genbank:WP_048874917.1;Name=WP_048874917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514438.1;product=Na+/H+ antiporter NhaA;protein_id=WP_048874917.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	297944	299036	.	-	.	ID=gene313;Name=CleRt_RS01435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01435;old_locus_tag=CleRT_02800;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	297944	299036	.	-	0	ID=cds310;Parent=gene313;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569757.1;product=cell division protein ZapE;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	299033	299629	.	-	.	ID=gene314;Name=CleRt_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01440;old_locus_tag=CleRT_02810
NZ_CP011126.1	Protein Homology	CDS	299033	299629	.	-	0	ID=cds311;Parent=gene314;Dbxref=Genbank:WP_048874918.1;Name=WP_048874918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005223841.1;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_048874918.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	299824	300675	.	+	.	ID=gene315;Name=CleRt_RS01445;end_range=300675,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01445;old_locus_tag=CleRT_02820;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	299824	300675	.	+	0	ID=cds312;Parent=gene315;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=300675,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252888.1;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	300713	301639	.	+	.	ID=gene316;Name=CleRt_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01450;old_locus_tag=CleRT_02830
NZ_CP011126.1	Protein Homology	CDS	300713	301639	.	+	0	ID=cds313;Parent=gene316;Dbxref=Genbank:WP_048874919.1;Name=WP_048874919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772111.1;product=peptidase M23B;protein_id=WP_048874919.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	302298	302678	.	-	.	ID=gene317;Name=CleRt_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01455
NZ_CP011126.1	GeneMarkS+	CDS	302298	302678	.	-	0	ID=cds314;Parent=gene317;Dbxref=Genbank:WP_048874920.1;Name=WP_048874920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874920.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	302901	303104	.	+	.	ID=gene318;Name=CleRt_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01460
NZ_CP011126.1	GeneMarkS+	CDS	302901	303104	.	+	0	ID=cds315;Parent=gene318;Dbxref=Genbank:WP_048874921.1;Name=WP_048874921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874921.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	303108	303428	.	-	.	ID=gene319;Name=CleRt_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01465
NZ_CP011126.1	GeneMarkS+	CDS	303108	303428	.	-	0	ID=cds316;Parent=gene319;Dbxref=Genbank:WP_048874922.1;Name=WP_048874922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874922.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	303425	303874	.	-	.	ID=gene320;Name=CleRt_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01470
NZ_CP011126.1	GeneMarkS+	CDS	303425	303874	.	-	0	ID=cds317;Parent=gene320;Dbxref=Genbank:WP_048874923.1;Name=WP_048874923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874923.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	304201	304623	.	-	.	ID=gene321;Name=CleRt_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01475;old_locus_tag=CleRT_02850
NZ_CP011126.1	Protein Homology	CDS	304201	304623	.	-	0	ID=cds318;Parent=gene321;Dbxref=Genbank:WP_048874924.1;Name=WP_048874924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569760.1;product=protein TolR;protein_id=WP_048874924.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	304601	305305	.	-	.	ID=gene322;Name=CleRt_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01480;old_locus_tag=CleRT_02860
NZ_CP011126.1	Protein Homology	CDS	304601	305305	.	-	0	ID=cds319;Parent=gene322;Dbxref=Genbank:WP_048874925.1;Name=WP_048874925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958307.1;product=protein TolQ;protein_id=WP_048874925.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	305371	306617	.	-	.	ID=gene323;Name=CleRt_RS01485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01485;old_locus_tag=CleRT_02870;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	305371	306617	.	-	0	ID=cds320;Parent=gene323;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569761.1;product=MFS transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	306764	307798	.	-	.	ID=gene324;Name=CleRt_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01490;old_locus_tag=CleRT_02880
NZ_CP011126.1	Protein Homology	CDS	306764	307798	.	-	0	ID=cds321;Parent=gene324;Dbxref=Genbank:WP_048874926.1;Name=WP_048874926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020558939.1;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_048874926.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	307802	308401	.	-	.	ID=gene325;Name=CleRt_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01495;old_locus_tag=CleRT_02890
NZ_CP011126.1	Protein Homology	CDS	307802	308401	.	-	0	ID=cds322;Parent=gene325;Dbxref=Genbank:WP_048874927.1;Name=WP_048874927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008090213.1;product=Holliday junction branch migration protein RuvA;protein_id=WP_048874927.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	308512	309015	.	-	.	ID=gene326;Name=CleRt_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01500;old_locus_tag=CleRT_02900
NZ_CP011126.1	Protein Homology	CDS	308512	309015	.	-	0	ID=cds323;Parent=gene326;Dbxref=Genbank:WP_048874928.1;Name=WP_048874928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772101.1;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_048874928.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	309020	309757	.	-	.	ID=gene327;Name=CleRt_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01505;old_locus_tag=CleRT_02910
NZ_CP011126.1	Protein Homology	CDS	309020	309757	.	-	0	ID=cds324;Parent=gene327;Dbxref=Genbank:WP_048874929.1;Name=WP_048874929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018955063.1;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_048874929.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	309765	311537	.	-	.	ID=gene328;Name=CleRt_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01510;old_locus_tag=CleRT_02920
NZ_CP011126.1	Protein Homology	CDS	309765	311537	.	-	0	ID=cds325;Parent=gene328;Dbxref=Genbank:WP_048874930.1;Name=WP_048874930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772641.1;product=aspartate--tRNA ligase;protein_id=WP_048874930.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	311675	312472	.	-	.	ID=gene329;Name=CleRt_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01515;old_locus_tag=CleRT_02930
NZ_CP011126.1	Protein Homology	CDS	311675	312472	.	-	0	ID=cds326;Parent=gene329;Dbxref=Genbank:WP_048874931.1;Name=WP_048874931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220709.1;product=hypothetical protein;protein_id=WP_048874931.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	312540	313184	.	-	.	ID=gene330;Name=CleRt_RS08770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08770;old_locus_tag=CleRT_02940;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	312540	313184	.	-	0	ID=cds327;Parent=gene330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252983.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	313181	313468	.	-	.	ID=gene331;Name=CleRt_RS01520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01520;old_locus_tag=CleRT_02950;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	313181	313468	.	-	0	ID=cds328;Parent=gene331;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772089.1;product=FmdB family transcriptional regulator;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	313660	313881	.	-	.	ID=gene332;Name=CleRt_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01525
NZ_CP011126.1	GeneMarkS+	CDS	313660	313881	.	-	0	ID=cds329;Parent=gene332;Dbxref=Genbank:WP_048874932.1;Name=WP_048874932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874932.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	316521	316727	.	-	.	ID=gene333;Name=CleRt_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01530
NZ_CP011126.1	GeneMarkS+	CDS	316521	316727	.	-	0	ID=cds330;Parent=gene333;Dbxref=Genbank:WP_048874933.1;Name=WP_048874933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874933.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	317051	317233	.	-	.	ID=gene334;Name=CleRt_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01535
NZ_CP011126.1	GeneMarkS+	CDS	317051	317233	.	-	0	ID=cds331;Parent=gene334;Dbxref=Genbank:WP_048874934.1;Name=WP_048874934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874934.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	318265	319500	.	-	.	ID=gene335;Name=CleRt_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01540;old_locus_tag=CleRT_02980
NZ_CP011126.1	Protein Homology	CDS	318265	319500	.	-	0	ID=cds332;Parent=gene335;Dbxref=Genbank:WP_082160399.1;Name=WP_082160399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958298.1;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_082160399.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	319629	322451	.	-	.	ID=gene336;Name=CleRt_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01545;old_locus_tag=CleRT_02990
NZ_CP011126.1	Protein Homology	CDS	319629	322451	.	-	0	ID=cds333;Parent=gene336;Dbxref=Genbank:WP_048874935.1;Name=WP_048874935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772083.1;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_048874935.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	322830	323270	.	+	.	ID=gene337;Name=CleRt_RS01550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01550;old_locus_tag=CleRT_03000;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	322830	323270	.	+	0	ID=cds334;Parent=gene337;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008736131.1;product=RNA pyrophosphohydrolase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	323270	325543	.	+	.	ID=gene338;Name=CleRt_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01555;old_locus_tag=CleRT_03010
NZ_CP011126.1	Protein Homology	CDS	323270	325543	.	+	0	ID=cds335;Parent=gene338;Dbxref=Genbank:WP_048874936.1;Name=WP_048874936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019232814.1;product=phosphoenolpyruvate-protein phosphotransferase PtsP;protein_id=WP_048874936.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	325616	326401	.	+	.	ID=gene339;Name=CleRt_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01560;old_locus_tag=CleRT_03020
NZ_CP011126.1	Protein Homology	CDS	325616	326401	.	+	0	ID=cds336;Parent=gene339;Dbxref=Genbank:WP_048874937.1;Name=WP_048874937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006035007.1;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_048874937.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	326414	326804	.	+	.	ID=gene340;Name=CleRt_RS01565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01565;old_locus_tag=CleRT_03030;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	326414	326804	.	+	0	ID=cds337;Parent=gene340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772079.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	326804	327598	.	+	.	ID=gene341;Name=CleRt_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01570;old_locus_tag=CleRT_03040
NZ_CP011126.1	Protein Homology	CDS	326804	327598	.	+	0	ID=cds338;Parent=gene341;Dbxref=Genbank:WP_048875757.1;Name=WP_048875757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019232811.1;product=thymidylate synthase;protein_id=WP_048875757.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	327576	327806	.	-	.	ID=gene342;Name=CleRt_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01575
NZ_CP011126.1	GeneMarkS+	CDS	327576	327806	.	-	0	ID=cds339;Parent=gene342;Dbxref=Genbank:WP_048874938.1;Name=WP_048874938.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874938.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	328790	328987	.	+	.	ID=gene343;Name=CleRt_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01580
NZ_CP011126.1	GeneMarkS+	CDS	328790	328987	.	+	0	ID=cds340;Parent=gene343;Dbxref=Genbank:WP_048874939.1;Name=WP_048874939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874939.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	329085	330482	.	-	.	ID=gene344;Name=CleRt_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01585;old_locus_tag=CleRT_03050
NZ_CP011126.1	Protein Homology	CDS	329085	330482	.	-	0	ID=cds341;Parent=gene344;Dbxref=Genbank:WP_048874940.1;Name=WP_048874940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569778.1;product=S41 family peptidase;protein_id=WP_048874940.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	330507	331055	.	-	.	ID=gene345;Name=CleRt_RS01590;end_range=331055,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01590;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	330507	331055	.	-	0	ID=cds342;Parent=gene345;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;end_range=331055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569779.1;partial=true;product=peptidase M23;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	331438	333033	.	-	.	ID=gene346;Name=CleRt_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01595;old_locus_tag=CleRT_03070
NZ_CP011126.1	Protein Homology	CDS	331438	333033	.	-	0	ID=cds343;Parent=gene346;Dbxref=Genbank:WP_048874941.1;Name=WP_048874941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772067.1;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_048874941.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	333176	335113	.	+	.	ID=gene347;Name=CleRt_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01600;old_locus_tag=CleRT_03080
NZ_CP011126.1	Protein Homology	CDS	333176	335113	.	+	0	ID=cds344;Parent=gene347;Dbxref=Genbank:WP_048875758.1;Name=WP_048875758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011611061.1;product=S9 family peptidase;protein_id=WP_048875758.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	335119	335973	.	+	.	ID=gene348;Name=CleRt_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01605;old_locus_tag=CleRT_03090
NZ_CP011126.1	Protein Homology	CDS	335119	335973	.	+	0	ID=cds345;Parent=gene348;Dbxref=Genbank:WP_048874942.1;Name=WP_048874942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10727.7%2CHMM:PF10728.7;product=DUF2520 domain-containing protein;protein_id=WP_048874942.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	336073	336504	.	+	.	ID=gene349;Name=CleRt_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01610;old_locus_tag=CleRT_03100
NZ_CP011126.1	Protein Homology	CDS	336073	336504	.	+	0	ID=cds346;Parent=gene349;Dbxref=Genbank:WP_048874943.1;Name=WP_048874943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772053.1;product=rhodanese-like domain-containing protein;protein_id=WP_048874943.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	336506	336781	.	+	.	ID=gene350;Name=CleRt_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01615;old_locus_tag=CleRT_03110
NZ_CP011126.1	Protein Homology	CDS	336506	336781	.	+	0	ID=cds347;Parent=gene350;Dbxref=Genbank:WP_048874944.1;Name=WP_048874944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019478010.1;product=glutaredoxin 3;protein_id=WP_048874944.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	336781	337257	.	+	.	ID=gene351;Name=CleRt_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01620;old_locus_tag=CleRT_03120
NZ_CP011126.1	Protein Homology	CDS	336781	337257	.	+	0	ID=cds348;Parent=gene351;Dbxref=Genbank:WP_048874945.1;Name=WP_048874945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013816993.1;product=protein-export chaperone SecB;protein_id=WP_048874945.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	337260	338261	.	+	.	ID=gene352;Name=CleRt_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01625;old_locus_tag=CleRT_03130
NZ_CP011126.1	Protein Homology	CDS	337260	338261	.	+	0	ID=cds349;Parent=gene352;Dbxref=Genbank:WP_048874946.1;Name=WP_048874946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958277.1;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_048874946.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	338295	338809	.	-	.	ID=gene353;Name=CleRt_RS01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01630;old_locus_tag=CleRT_03140;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	338295	338809	.	-	0	ID=cds350;Parent=gene353;Note=member of the SPOUT superfamily of RNA methyltransferases%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569789.1;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	339262	339570	.	-	.	ID=gene354;Name=CleRt_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01635;old_locus_tag=CleRT_03150
NZ_CP011126.1	GeneMarkS+	CDS	339262	339570	.	-	0	ID=cds351;Parent=gene354;Dbxref=Genbank:WP_048874947.1;Name=WP_048874947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874947.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	340220	340549	.	-	.	ID=gene355;Name=CleRt_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01640
NZ_CP011126.1	Protein Homology	CDS	340220	340549	.	-	0	ID=cds352;Parent=gene355;Dbxref=Genbank:WP_082160400.1;Name=WP_082160400.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04333.11;product=hypothetical protein;protein_id=WP_082160400.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	340706	341493	.	+	.	ID=gene356;Name=CleRt_RS01645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01645;old_locus_tag=CleRT_03170;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	340706	341493	.	+	0	ID=cds353;Parent=gene356;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012842674.1;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	341493	342200	.	+	.	ID=gene357;Name=CleRt_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01650;old_locus_tag=CleRT_03180
NZ_CP011126.1	Protein Homology	CDS	341493	342200	.	+	0	ID=cds354;Parent=gene357;Dbxref=Genbank:WP_048874949.1;Name=WP_048874949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958273.1;product=hypothetical protein;protein_id=WP_048874949.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	342224	342997	.	-	.	ID=gene358;Name=CleRt_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01655;old_locus_tag=CleRT_03190
NZ_CP011126.1	Protein Homology	CDS	342224	342997	.	-	0	ID=cds355;Parent=gene358;Dbxref=Genbank:WP_048874950.1;Name=WP_048874950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772043.1;product=zinc transporter;protein_id=WP_048874950.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	343070	344020	.	+	.	ID=gene359;Name=CleRt_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01660;old_locus_tag=CleRT_03200
NZ_CP011126.1	Protein Homology	CDS	343070	344020	.	+	0	ID=cds356;Parent=gene359;Dbxref=Genbank:WP_048874951.1;Name=WP_048874951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772042.1;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_048874951.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	343996	345353	.	+	.	ID=gene360;Name=CleRt_RS01665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01665;old_locus_tag=CleRT_03210;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	343996	345353	.	+	0	ID=cds357;Parent=gene360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220688.1;product=tRNA lysidine(34) synthetase TilS;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	345405	345763	.	+	.	ID=gene361;Name=CleRt_RS08775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08775;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	345405	345763	.	+	0	ID=cds358;Parent=gene361;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220687.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	345887	346529	.	+	.	ID=gene362;Name=CleRt_RS08780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08780;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	345887	346529	.	+	0	ID=cds359;Parent=gene362;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253408.1;product=haloacid dehalogenase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	346628	347045	.	+	.	ID=gene363;Name=CleRt_RS08785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08785;old_locus_tag=CleRT_03230;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	346628	347045	.	+	0	ID=cds360;Parent=gene363;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958270.1;product=thioesterase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	347133	348944	.	+	.	ID=gene364;Name=CleRt_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01680;old_locus_tag=CleRT_03240
NZ_CP011126.1	Protein Homology	CDS	347133	348944	.	+	0	ID=cds361;Parent=gene364;Dbxref=Genbank:WP_048874954.1;Name=WP_048874954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043880837.1;product=elongation factor 4;protein_id=WP_048874954.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	348934	349712	.	+	.	ID=gene365;Name=CleRt_RS01685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01685;old_locus_tag=CleRT_03250;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	348934	349712	.	+	0	ID=cds362;Parent=gene365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996595.1;product=signal peptidase I;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	349745	350410	.	+	.	ID=gene366;Name=CleRt_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01690;old_locus_tag=CleRT_03260
NZ_CP011126.1	Protein Homology	CDS	349745	350410	.	+	0	ID=cds363;Parent=gene366;Dbxref=Genbank:WP_048874955.1;Name=WP_048874955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010628032.1;product=ribonuclease III;protein_id=WP_048874955.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	350403	351296	.	+	.	ID=gene367;Name=CleRt_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01695;old_locus_tag=CleRT_03270
NZ_CP011126.1	Protein Homology	CDS	350403	351296	.	+	0	ID=cds364;Parent=gene367;Dbxref=Genbank:WP_048874956.1;Name=WP_048874956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011330969.1;product=GTPase Era;protein_id=WP_048874956.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	351293	351988	.	+	.	ID=gene368;Name=CleRt_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01700;old_locus_tag=CleRT_03280
NZ_CP011126.1	Protein Homology	CDS	351293	351988	.	+	0	ID=cds365;Parent=gene368;Dbxref=Genbank:WP_048874957.1;Name=WP_048874957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772032.1;product=DNA repair protein RecO;protein_id=WP_048874957.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	352018	352740	.	+	.	ID=gene369;Name=CleRt_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01705;old_locus_tag=CleRT_03290
NZ_CP011126.1	Protein Homology	CDS	352018	352740	.	+	0	ID=cds366;Parent=gene369;Dbxref=Genbank:WP_048874958.1;Name=WP_048874958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772027.1;product=pyridoxine 5'-phosphate synthase;protein_id=WP_048874958.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	352821	353546	.	-	.	ID=gene370;Name=CleRt_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01710;old_locus_tag=CleRT_03300
NZ_CP011126.1	Protein Homology	CDS	352821	353546	.	-	0	ID=cds367;Parent=gene370;Dbxref=Genbank:WP_048874959.1;Name=WP_048874959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569802.1;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_048874959.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	353763	355169	.	+	.	ID=gene371;Name=CleRt_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01715;old_locus_tag=CleRT_03310
NZ_CP011126.1	Protein Homology	CDS	353763	355169	.	+	0	ID=cds368;Parent=gene371;Dbxref=Genbank:WP_048874960.1;Name=WP_048874960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772712.1;product=glutamate--tRNA ligase;protein_id=WP_048874960.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	355144	356535	.	+	.	ID=gene372;Name=CleRt_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01720;old_locus_tag=CleRT_03320
NZ_CP011126.1	Protein Homology	CDS	355144	356535	.	+	0	ID=cds369;Parent=gene372;Dbxref=Genbank:WP_048874961.1;Name=WP_048874961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009603476.1;product=cysteine--tRNA ligase;protein_id=WP_048874961.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	356961	357275	.	+	.	ID=gene373;Name=CleRt_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01725
NZ_CP011126.1	Protein Homology	CDS	356961	357275	.	+	0	ID=cds370;Parent=gene373;Dbxref=Genbank:WP_048874962.1;Name=WP_048874962.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08613.9;product=hypothetical protein;protein_id=WP_048874962.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	357891	359180	.	-	.	ID=gene374;Name=CleRt_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01730;old_locus_tag=CleRT_03350
NZ_CP011126.1	Protein Homology	CDS	357891	359180	.	-	0	ID=cds371;Parent=gene374;Dbxref=Genbank:WP_048874963.1;Name=WP_048874963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772018.1;product=MFS transporter;protein_id=WP_048874963.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	359350	360439	.	+	.	ID=gene375;Name=CleRt_RS08790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08790;old_locus_tag=CleRT_03360;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	359350	360439	.	+	0	ID=cds372;Parent=gene375;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569805.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	360492	361165	.	+	.	ID=gene376;Name=CleRt_RS01745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01745;old_locus_tag=CleRT_03370;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	360492	361165	.	+	0	ID=cds373;Parent=gene376;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011216798.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	361734	362120	.	+	.	ID=gene377;Name=CleRt_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08795
NZ_CP011126.1	GeneMarkS+	CDS	361734	362120	.	+	0	ID=cds374;Parent=gene377;Dbxref=Genbank:WP_082160401.1;Name=WP_082160401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160401.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	362123	362416	.	+	.	ID=gene378;Name=CleRt_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08800
NZ_CP011126.1	GeneMarkS+	CDS	362123	362416	.	+	0	ID=cds375;Parent=gene378;Dbxref=Genbank:WP_082160402.1;Name=WP_082160402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160402.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	363416	363670	.	-	.	ID=gene379;Name=CleRt_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01755
NZ_CP011126.1	GeneMarkS+	CDS	363416	363670	.	-	0	ID=cds376;Parent=gene379;Dbxref=Genbank:WP_048874966.1;Name=WP_048874966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874966.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	364640	366042	.	-	.	ID=gene380;Name=CleRt_RS01765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01765;old_locus_tag=CleRT_03430;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	364640	366042	.	-	0	ID=cds377;Parent=gene380;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958052.1;product=deoxyribodipyrimidine photolyase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	366851	367141	.	+	.	ID=gene381;Name=CleRt_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01770;old_locus_tag=CleRT_03450
NZ_CP011126.1	GeneMarkS+	CDS	366851	367141	.	+	0	ID=cds378;Parent=gene381;Dbxref=Genbank:WP_048874967.1;Name=WP_048874967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874967.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	367381	367913	.	-	.	ID=gene382;Name=CleRt_RS01775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01775;old_locus_tag=CleRT_03460;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	367381	367913	.	-	0	ID=cds379;Parent=gene382;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220673.1;product=alkyl hydroperoxide reductase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	367924	368433	.	-	.	ID=gene383;Name=CleRt_RS01780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01780;old_locus_tag=CleRT_03470;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	367924	368433	.	-	0	ID=cds380;Parent=gene383;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020556551.1;product=alkyl hydroperoxide reductase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	368600	370033	.	-	.	ID=gene384;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=CleRt_RS01785;old_locus_tag=CleRT_03480
NZ_CP011126.1	Protein Homology	CDS	368600	370033	.	-	0	ID=cds381;Parent=gene384;Dbxref=Genbank:WP_048874968.1;Name=WP_048874968.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958250.1;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_048874968.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	370041	371495	.	-	.	ID=gene385;Name=CleRt_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01790;old_locus_tag=CleRT_03490
NZ_CP011126.1	Protein Homology	CDS	370041	371495	.	-	0	ID=cds382;Parent=gene385;Dbxref=Genbank:WP_048874969.1;Name=WP_048874969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772005.1;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_048874969.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	371507	371806	.	-	.	ID=gene386;Name=CleRt_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01795;old_locus_tag=CleRT_03500
NZ_CP011126.1	Protein Homology	CDS	371507	371806	.	-	0	ID=cds383;Parent=gene386;Dbxref=Genbank:WP_048874970.1;Name=WP_048874970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569811.1;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_048874970.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	371976	373022	.	+	.	ID=gene387;Name=CleRt_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01800;old_locus_tag=CleRT_03510
NZ_CP011126.1	Protein Homology	CDS	371976	373022	.	+	0	ID=cds384;Parent=gene387;Dbxref=Genbank:WP_048874971.1;Name=WP_048874971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018577556.1;product=rod shape-determining protein;protein_id=WP_048874971.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	373064	373960	.	+	.	ID=gene388;Name=CleRt_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01805;old_locus_tag=CleRT_03520
NZ_CP011126.1	Protein Homology	CDS	373064	373960	.	+	0	ID=cds385;Parent=gene388;Dbxref=Genbank:WP_048874972.1;Name=WP_048874972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220672.1;product=rod shape-determining protein MreC;protein_id=WP_048874972.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	373950	374438	.	+	.	ID=gene389;Name=CleRt_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01810;old_locus_tag=CleRT_03530
NZ_CP011126.1	Protein Homology	CDS	373950	374438	.	+	0	ID=cds386;Parent=gene389;Dbxref=Genbank:WP_048874973.1;Name=WP_048874973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772000.1;product=rod shape-determining protein MreD;protein_id=WP_048874973.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	374438	378034	.	+	.	ID=gene390;Name=CleRt_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08195;old_locus_tag=CleRT_03540
NZ_CP011126.1	Protein Homology	CDS	374438	378034	.	+	0	ID=cds387;Parent=gene390;Dbxref=Genbank:WP_053097825.1;Name=WP_053097825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13116.4%2CHMM:PF13502.4;product=DUF3971 domain-containing protein;protein_id=WP_053097825.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	378044	379477	.	+	.	ID=gene391;Name=CleRt_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01825;old_locus_tag=CleRT_03550
NZ_CP011126.1	Protein Homology	CDS	378044	379477	.	+	0	ID=cds388;Parent=gene391;Dbxref=Genbank:WP_048874974.1;Name=WP_048874974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996603.1;product=metalloprotease TldD;protein_id=WP_048874974.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	379805	380089	.	+	.	ID=gene392;Name=CleRt_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01830;old_locus_tag=CleRT_03560
NZ_CP011126.1	Protein Homology	CDS	379805	380089	.	+	0	ID=cds389;Parent=gene392;Dbxref=Genbank:WP_048874975.1;Name=WP_048874975.1;Note=histone-like DNA-binding protein;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772706.1;product=HU family DNA-binding protein;protein_id=WP_048874975.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	380259	380331	.	+	.	ID=gene393;Name=CleRt_RS01835;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS01835;old_locus_tag=CleRT_t004
NZ_CP011126.1	tRNAscan-SE	tRNA	380259	380331	.	+	.	ID=rna3;Parent=gene393;anticodon=(pos:380292..380294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Val
NZ_CP011126.1	tRNAscan-SE	exon	380259	380331	.	+	.	ID=id4;Parent=rna3;anticodon=(pos:380292..380294);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Val
NZ_CP011126.1	RefSeq	gene	380440	380516	.	+	.	ID=gene394;Name=CleRt_RS01840;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS01840;old_locus_tag=CleRT_t005
NZ_CP011126.1	tRNAscan-SE	tRNA	380440	380516	.	+	.	ID=rna4;Parent=gene394;anticodon=(pos:380474..380476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Asp
NZ_CP011126.1	tRNAscan-SE	exon	380440	380516	.	+	.	ID=id5;Parent=rna4;anticodon=(pos:380474..380476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Asp
NZ_CP011126.1	RefSeq	gene	380674	380886	.	+	.	ID=gene395;Name=CleRt_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01845
NZ_CP011126.1	GeneMarkS+	CDS	380674	380886	.	+	0	ID=cds390;Parent=gene395;Dbxref=Genbank:WP_048874976.1;Name=WP_048874976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874976.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	381036	381419	.	+	.	ID=gene396;Name=CleRt_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01850
NZ_CP011126.1	GeneMarkS+	CDS	381036	381419	.	+	0	ID=cds391;Parent=gene396;Dbxref=Genbank:WP_048874977.1;Name=WP_048874977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874977.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	382768	383535	.	+	.	ID=gene397;Name=CleRt_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01855;old_locus_tag=CleRT_03580
NZ_CP011126.1	Protein Homology	CDS	382768	383535	.	+	0	ID=cds392;Parent=gene397;Dbxref=Genbank:WP_048874978.1;Name=WP_048874978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769081.1;product=triose-phosphate isomerase;protein_id=WP_048874978.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	383517	383798	.	+	.	ID=gene398;Name=CleRt_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01860;old_locus_tag=CleRT_03590
NZ_CP011126.1	Protein Homology	CDS	383517	383798	.	+	0	ID=cds393;Parent=gene398;Dbxref=Genbank:WP_048874979.1;Name=WP_048874979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769079.1;product=preprotein translocase subunit SecG;protein_id=WP_048874979.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	383841	383925	.	+	.	ID=gene399;Name=CleRt_RS01865;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS01865;old_locus_tag=CleRT_t006
NZ_CP011126.1	tRNAscan-SE	tRNA	383841	383925	.	+	.	ID=rna5;Parent=gene399;anticodon=(pos:383875..383877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	tRNAscan-SE	exon	383841	383925	.	+	.	ID=id6;Parent=rna5;anticodon=(pos:383875..383877);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	RefSeq	gene	384056	384412	.	+	.	ID=gene400;Name=CleRt_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01870;old_locus_tag=CleRT_03600
NZ_CP011126.1	Protein Homology	CDS	384056	384412	.	+	0	ID=cds394;Parent=gene400;Dbxref=Genbank:WP_048874980.1;Name=WP_048874980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012971612.1;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_048874980.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	384413	384913	.	+	.	ID=gene401;Name=CleRt_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01875;old_locus_tag=CleRT_03610
NZ_CP011126.1	Protein Homology	CDS	384413	384913	.	+	0	ID=cds395;Parent=gene401;Dbxref=Genbank:WP_048874981.1;Name=WP_048874981.1;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769074.1;product=NADH dehydrogenase;protein_id=WP_048874981.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	384906	385577	.	+	.	ID=gene402;Name=CleRt_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01880;old_locus_tag=CleRT_03620
NZ_CP011126.1	Protein Homology	CDS	384906	385577	.	+	0	ID=cds396;Parent=gene402;Dbxref=Genbank:WP_048874982.1;Name=WP_048874982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958234.1;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_048874982.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	385578	386831	.	+	.	ID=gene403;Name=CleRt_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01885;old_locus_tag=CleRT_03630
NZ_CP011126.1	Protein Homology	CDS	385578	386831	.	+	0	ID=cds397;Parent=gene403;Dbxref=Genbank:WP_048874983.1;Name=WP_048874983.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012971609.1;product=NADH-quinone oxidoreductase subunit NuoD;protein_id=WP_048874983.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	386831	387358	.	+	.	ID=gene404;Name=CleRt_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01890;old_locus_tag=CleRT_03640
NZ_CP011126.1	Protein Homology	CDS	386831	387358	.	+	0	ID=cds398;Parent=gene404;Dbxref=Genbank:WP_048874984.1;Name=WP_048874984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006035151.1;product=NAD(P)H-dependent oxidoreductase subunit E;protein_id=WP_048874984.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	387348	388619	.	+	.	ID=gene405;Name=CleRt_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01895;old_locus_tag=CleRT_03650
NZ_CP011126.1	Protein Homology	CDS	387348	388619	.	+	0	ID=cds399;Parent=gene405;Dbxref=Genbank:WP_048874985.1;Name=WP_048874985.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014708018.1;product=NADH oxidoreductase (quinone) subunit F;protein_id=WP_048874985.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	388643	391054	.	+	.	ID=gene406;Name=CleRt_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01900;old_locus_tag=CleRT_03660
NZ_CP011126.1	Protein Homology	CDS	388643	391054	.	+	0	ID=cds400;Parent=gene406;Dbxref=Genbank:WP_048874986.1;Name=WP_048874986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958230.1;product=NADH-quinone oxidoreductase subunit G;protein_id=WP_048874986.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	391054	392076	.	+	.	ID=gene407;Name=CleRt_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01905;old_locus_tag=CleRT_03670
NZ_CP011126.1	Protein Homology	CDS	391054	392076	.	+	0	ID=cds401;Parent=gene407;Dbxref=Genbank:WP_048874987.1;Name=WP_048874987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006035930.1;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_048874987.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	392080	392571	.	+	.	ID=gene408;Name=CleRt_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01910;old_locus_tag=CleRT_03680
NZ_CP011126.1	Protein Homology	CDS	392080	392571	.	+	0	ID=cds402;Parent=gene408;Dbxref=Genbank:WP_048874988.1;Name=WP_048874988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010948470.1;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_048874988.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	392591	393196	.	+	.	ID=gene409;Name=CleRt_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01915;old_locus_tag=CleRT_03690
NZ_CP011126.1	Protein Homology	CDS	392591	393196	.	+	0	ID=cds403;Parent=gene409;Dbxref=Genbank:WP_082160403.1;Name=WP_082160403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569822.1;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_082160403.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	393193	393498	.	+	.	ID=gene410;Name=CleRt_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01920;old_locus_tag=CleRT_03700
NZ_CP011126.1	Protein Homology	CDS	393193	393498	.	+	0	ID=cds404;Parent=gene410;Dbxref=Genbank:WP_048874989.1;Name=WP_048874989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769056.1;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_048874989.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	393506	395461	.	+	.	ID=gene411;Name=CleRt_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01925;old_locus_tag=CleRT_03710
NZ_CP011126.1	Protein Homology	CDS	393506	395461	.	+	0	ID=cds405;Parent=gene411;Dbxref=Genbank:WP_048874990.1;Name=WP_048874990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007146550.1;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_048874990.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	395466	396986	.	+	.	ID=gene412;Name=CleRt_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01930;old_locus_tag=CleRT_03720
NZ_CP011126.1	Protein Homology	CDS	395466	396986	.	+	0	ID=cds406;Parent=gene412;Dbxref=Genbank:WP_082160404.1;Name=WP_082160404.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769050.1;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_082160404.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	396999	398447	.	+	.	ID=gene413;Name=CleRt_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01935;old_locus_tag=CleRT_03730
NZ_CP011126.1	Protein Homology	CDS	396999	398447	.	+	0	ID=cds407;Parent=gene413;Dbxref=Genbank:WP_048874992.1;Name=WP_048874992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996622.1;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_048874992.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	399303	399379	.	+	.	ID=gene414;Name=CleRt_RS01940;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS01940;old_locus_tag=CleRT_t007
NZ_CP011126.1	tRNAscan-SE	tRNA	399303	399379	.	+	.	ID=rna6;Parent=gene414;anticodon=(pos:399337..399339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Met
NZ_CP011126.1	tRNAscan-SE	exon	399303	399379	.	+	.	ID=id7;Parent=rna6;anticodon=(pos:399337..399339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Met
NZ_CP011126.1	RefSeq	pseudogene	399474	399933	.	+	.	ID=gene415;Name=CleRt_RS01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01945;old_locus_tag=CleRT_03740;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	399474	399933	.	+	0	ID=cds408;Parent=gene415;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996623.1;product=ribosome maturation factor RimP;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	399944	401437	.	+	.	ID=gene416;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=CleRt_RS01950;old_locus_tag=CleRT_03750
NZ_CP011126.1	Protein Homology	CDS	399944	401437	.	+	0	ID=cds409;Parent=gene416;Dbxref=Genbank:WP_048874993.1;Name=WP_048874993.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958224.1;product=transcription termination/antitermination protein NusA;protein_id=WP_048874993.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	401456	403867	.	+	.	ID=gene417;Name=CleRt_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01955;old_locus_tag=CleRT_03760
NZ_CP011126.1	Protein Homology	CDS	401456	403867	.	+	0	ID=cds410;Parent=gene417;Dbxref=Genbank:WP_048874994.1;Name=WP_048874994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569826.1;product=translation initiation factor IF-2;protein_id=WP_048874994.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	403870	404223	.	+	.	ID=gene418;Name=CleRt_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01960;old_locus_tag=CleRT_03770
NZ_CP011126.1	Protein Homology	CDS	403870	404223	.	+	0	ID=cds411;Parent=gene418;Dbxref=Genbank:WP_048874995.1;Name=WP_048874995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569827.1;product=30S ribosome-binding factor RbfA;protein_id=WP_048874995.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	404207	405139	.	+	.	ID=gene419;Name=CleRt_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01965;old_locus_tag=CleRT_03780
NZ_CP011126.1	Protein Homology	CDS	404207	405139	.	+	0	ID=cds412;Parent=gene419;Dbxref=Genbank:WP_048874996.1;Name=WP_048874996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015879310.1;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_048874996.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	405560	405772	.	-	.	ID=gene420;Name=CleRt_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08200
NZ_CP011126.1	GeneMarkS+	CDS	405560	405772	.	-	0	ID=cds413;Parent=gene420;Dbxref=Genbank:WP_053097828.1;Name=WP_053097828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=DUF962 domain-containing protein;protein_id=WP_053097828.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	405955	406382	.	+	.	ID=gene421;Name=CleRt_RS01975;end_range=406382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01975;old_locus_tag=CleRT_03800;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	405955	406382	.	+	0	ID=cds414;Parent=gene421;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=406382,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771746.1;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	406476	407416	.	+	.	ID=gene422;Name=CleRt_RS01980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS01980;old_locus_tag=CleRT_03810;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	406476	407416	.	+	0	ID=cds415;Parent=gene422;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006870227.1;product=delta-aminolevulinic acid dehydratase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	407484	408839	.	+	.	ID=gene423;Name=CleRt_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01985;old_locus_tag=CleRT_03820
NZ_CP011126.1	Protein Homology	CDS	407484	408839	.	+	0	ID=cds416;Parent=gene423;Dbxref=Genbank:WP_048874997.1;Name=WP_048874997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002555235.1;product=DNA repair protein RadA;protein_id=WP_048874997.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	409250	409522	.	+	.	ID=gene424;Name=CleRt_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01990
NZ_CP011126.1	GeneMarkS+	CDS	409250	409522	.	+	0	ID=cds417;Parent=gene424;Dbxref=Genbank:WP_048874998.1;Name=WP_048874998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874998.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	409500	409781	.	+	.	ID=gene425;Name=CleRt_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS01995;old_locus_tag=CleRT_03830
NZ_CP011126.1	GeneMarkS+	CDS	409500	409781	.	+	0	ID=cds418;Parent=gene425;Dbxref=Genbank:WP_048874999.1;Name=WP_048874999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874999.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	409955	410557	.	+	.	ID=gene426;Name=CleRt_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02000;old_locus_tag=CleRT_03840
NZ_CP011126.1	GeneMarkS+	CDS	409955	410557	.	+	0	ID=cds419;Parent=gene426;Dbxref=Genbank:WP_048875000.1;Name=WP_048875000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875000.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	410757	412025	.	+	.	ID=gene427;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=CleRt_RS02005;old_locus_tag=CleRT_03850
NZ_CP011126.1	Protein Homology	CDS	410757	412025	.	+	0	ID=cds420;Parent=gene427;Dbxref=Genbank:WP_048875001.1;Name=WP_048875001.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002682925.1;product=serine hydroxymethyltransferase;protein_id=WP_048875001.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	412029	412484	.	+	.	ID=gene428;Name=CleRt_RS02010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02010;old_locus_tag=CleRT_03860;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	412029	412484	.	+	0	ID=cds421;Parent=gene428;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007144710.1;product=transcriptional regulator NrdR;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	412490	412906	.	+	.	ID=gene429;Name=CleRt_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02015;old_locus_tag=CleRT_03870
NZ_CP011126.1	Protein Homology	CDS	412490	412906	.	+	0	ID=cds422;Parent=gene429;Dbxref=Genbank:WP_048875002.1;Name=WP_048875002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771734.1;product=transcription antitermination factor NusB;protein_id=WP_048875002.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	413293	413942	.	-	.	ID=gene430;Name=CleRt_RS02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02020;old_locus_tag=CleRT_03890;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	413293	413942	.	-	0	ID=cds423;Parent=gene430;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220648.1;product=transcriptional regulator;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	414153	415103	.	+	.	ID=gene431;Name=CleRt_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02025;old_locus_tag=CleRT_03900
NZ_CP011126.1	Protein Homology	CDS	414153	415103	.	+	0	ID=cds424;Parent=gene431;Dbxref=Genbank:WP_048875003.1;Name=WP_048875003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996634.1;product=thiamine-phosphate kinase;protein_id=WP_048875003.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	415090	415614	.	+	.	ID=gene432;Name=CleRt_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02030;old_locus_tag=CleRT_03910
NZ_CP011126.1	Protein Homology	CDS	415090	415614	.	+	0	ID=cds425;Parent=gene432;Dbxref=Genbank:WP_048875004.1;Name=WP_048875004.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04608.11;product=phosphatidylglycerophosphatase A;protein_id=WP_048875004.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	415664	415891	.	+	.	ID=gene433;Name=CleRt_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02035
NZ_CP011126.1	GeneMarkS+	CDS	415664	415891	.	+	0	ID=cds426;Parent=gene433;Dbxref=Genbank:WP_048875005.1;Name=WP_048875005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875005.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	415892	416113	.	+	.	ID=gene434;Name=CleRt_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02040
NZ_CP011126.1	GeneMarkS+	CDS	415892	416113	.	+	0	ID=cds427;Parent=gene434;Dbxref=Genbank:WP_048875006.1;Name=WP_048875006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875006.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	417708	418994	.	-	.	ID=gene435;Name=CleRt_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02045;old_locus_tag=CleRT_03950
NZ_CP011126.1	Protein Homology	CDS	417708	418994	.	-	0	ID=cds428;Parent=gene435;Dbxref=Genbank:WP_048875007.1;Name=WP_048875007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958208.1;product=citrate (Si)-synthase;protein_id=WP_048875007.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	419250	419636	.	+	.	ID=gene436;Name=CleRt_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02050;old_locus_tag=CleRT_03960
NZ_CP011126.1	Protein Homology	CDS	419250	419636	.	+	0	ID=cds429;Parent=gene436;Dbxref=Genbank:WP_048875008.1;Name=WP_048875008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771715.1;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_048875008.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	419630	419971	.	+	.	ID=gene437;Name=CleRt_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02055;old_locus_tag=CleRT_03970
NZ_CP011126.1	Protein Homology	CDS	419630	419971	.	+	0	ID=cds430;Parent=gene437;Dbxref=Genbank:WP_048875009.1;Name=WP_048875009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771714.1;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_048875009.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	419983	421746	.	+	.	ID=gene438;Name=CleRt_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02060;old_locus_tag=CleRT_03980
NZ_CP011126.1	Protein Homology	CDS	419983	421746	.	+	0	ID=cds431;Parent=gene438;Dbxref=Genbank:WP_048875010.1;Name=WP_048875010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958202.1;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_048875010.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	421750	422478	.	+	.	ID=gene439;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=CleRt_RS02065;old_locus_tag=CleRT_03990
NZ_CP011126.1	Protein Homology	CDS	421750	422478	.	+	0	ID=cds432;Parent=gene439;Dbxref=Genbank:WP_082160405.1;Name=WP_082160405.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771712.1;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_082160405.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	422546	425359	.	+	.	ID=gene440;Name=CleRt_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02070;old_locus_tag=CleRT_04000
NZ_CP011126.1	Protein Homology	CDS	422546	425359	.	+	0	ID=cds433;Parent=gene440;Dbxref=Genbank:WP_048875011.1;Name=WP_048875011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996643.1;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_048875011.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	425361	426578	.	+	.	ID=gene441;Name=CleRt_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02075;old_locus_tag=CleRT_04010
NZ_CP011126.1	Protein Homology	CDS	425361	426578	.	+	0	ID=cds434;Parent=gene441;Dbxref=Genbank:WP_048875012.1;Name=WP_048875012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010652497.1;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_048875012.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	426648	427817	.	+	.	ID=gene442;Name=CleRt_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02080;old_locus_tag=CleRT_04020
NZ_CP011126.1	Protein Homology	CDS	426648	427817	.	+	0	ID=cds435;Parent=gene442;Dbxref=Genbank:WP_048875763.1;Name=WP_048875763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772545.1;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_048875763.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	427817	428689	.	+	.	ID=gene443;Name=CleRt_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02085;old_locus_tag=CleRT_04030
NZ_CP011126.1	Protein Homology	CDS	427817	428689	.	+	0	ID=cds436;Parent=gene443;Dbxref=Genbank:WP_048875013.1;Name=WP_048875013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019234556.1;product=succinate--CoA ligase subunit alpha;protein_id=WP_048875013.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	428807	429148	.	+	.	ID=gene444;Name=CleRt_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02090;old_locus_tag=CleRT_04040
NZ_CP011126.1	Protein Homology	CDS	428807	429148	.	+	0	ID=cds437;Parent=gene444;Dbxref=Genbank:WP_082160496.1;Name=WP_082160496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996647.1;product=hypothetical protein;protein_id=WP_082160496.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	429426	429674	.	+	.	ID=gene445;Name=CleRt_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08205
NZ_CP011126.1	GeneMarkS+	CDS	429426	429674	.	+	0	ID=cds438;Parent=gene445;Dbxref=Genbank:WP_053097830.1;Name=WP_053097830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097830.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	430695	430991	.	-	.	ID=gene446;Name=CleRt_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02100
NZ_CP011126.1	GeneMarkS+	CDS	430695	430991	.	-	0	ID=cds439;Parent=gene446;Dbxref=Genbank:WP_048875014.1;Name=WP_048875014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875014.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	431582	432367	.	-	.	ID=gene447;Name=CleRt_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02105;old_locus_tag=CleRT_04060
NZ_CP011126.1	Protein Homology	CDS	431582	432367	.	-	0	ID=cds440;Parent=gene447;Dbxref=Genbank:WP_048875015.1;Name=WP_048875015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014293061.1;product=type I methionyl aminopeptidase;protein_id=WP_048875015.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	432617	433573	.	+	.	ID=gene448;Name=CleRt_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02110;old_locus_tag=CleRT_04070
NZ_CP011126.1	Protein Homology	CDS	432617	433573	.	+	0	ID=cds441;Parent=gene448;Dbxref=Genbank:WP_053097832.1;Name=WP_053097832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220631.1;product=30S ribosomal protein S2;protein_id=WP_053097832.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	433584	434474	.	+	.	ID=gene449;Name=CleRt_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02115;old_locus_tag=CleRT_04080
NZ_CP011126.1	Protein Homology	CDS	433584	434474	.	+	0	ID=cds442;Parent=gene449;Dbxref=Genbank:WP_048875016.1;Name=WP_048875016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772548.1;product=elongation factor Ts;protein_id=WP_048875016.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	434474	435196	.	+	.	ID=gene450;Name=CleRt_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02120;old_locus_tag=CleRT_04090
NZ_CP011126.1	Protein Homology	CDS	434474	435196	.	+	0	ID=cds443;Parent=gene450;Dbxref=Genbank:WP_048875017.1;Name=WP_048875017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771682.1;product=UMP kinase;protein_id=WP_048875017.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	435288	435845	.	+	.	ID=gene451;Name=CleRt_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02125;old_locus_tag=CleRT_04100
NZ_CP011126.1	Protein Homology	CDS	435288	435845	.	+	0	ID=cds444;Parent=gene451;Dbxref=Genbank:WP_048875018.1;Name=WP_048875018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958191.1;product=ribosome recycling factor;protein_id=WP_048875018.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	435882	436652	.	+	.	ID=gene452;Name=CleRt_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02130;old_locus_tag=CleRT_04110
NZ_CP011126.1	Protein Homology	CDS	435882	436652	.	+	0	ID=cds445;Parent=gene452;Dbxref=Genbank:WP_082160406.1;Name=WP_082160406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017840439.1;product=isoprenyl transferase;protein_id=WP_082160406.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	436645	437454	.	+	.	ID=gene453;Name=CleRt_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02135;old_locus_tag=CleRT_04120
NZ_CP011126.1	Protein Homology	CDS	436645	437454	.	+	0	ID=cds446;Parent=gene453;Dbxref=Genbank:WP_048875019.1;Name=WP_048875019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771679.1;product=phosphatidate cytidylyltransferase;protein_id=WP_048875019.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	437501	439042	.	-	.	ID=gene454;Name=CleRt_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02140;old_locus_tag=CleRT_04130
NZ_CP011126.1	Protein Homology	CDS	437501	439042	.	-	0	ID=cds447;Parent=gene454;Dbxref=Genbank:WP_048875020.1;Name=WP_048875020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772541.1;product=dihydrofolate reductase;protein_id=WP_048875020.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	439032	439943	.	-	.	ID=gene455;Name=CleRt_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02145;old_locus_tag=CleRT_04140
NZ_CP011126.1	Protein Homology	CDS	439032	439943	.	-	0	ID=cds448;Parent=gene455;Dbxref=Genbank:WP_048875767.1;Name=WP_048875767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772552.1;product=mevalonate kinase;protein_id=WP_048875767.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	439966	440985	.	-	.	ID=gene456;Name=CleRt_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02150;old_locus_tag=CleRT_04150
NZ_CP011126.1	Protein Homology	CDS	439966	440985	.	-	0	ID=cds449;Parent=gene456;Dbxref=Genbank:WP_048875021.1;Name=WP_048875021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996656.1;product=mevalonate kinase;protein_id=WP_048875021.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	440996	442066	.	-	.	ID=gene457;Name=CleRt_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02155;old_locus_tag=CleRT_04160
NZ_CP011126.1	Protein Homology	CDS	440996	442066	.	-	0	ID=cds450;Parent=gene457;Dbxref=Genbank:WP_048875768.1;Name=WP_048875768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020285083.1;product=hydroxymethylglutaryl-CoA reductase;protein_id=WP_048875768.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	442593	442820	.	+	.	ID=gene458;Name=CleRt_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02160
NZ_CP011126.1	GeneMarkS+	CDS	442593	442820	.	+	0	ID=cds451;Parent=gene458;Dbxref=Genbank:WP_048875022.1;Name=WP_048875022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875022.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	442839	443138	.	-	.	ID=gene459;Name=CleRt_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02165;old_locus_tag=CleRT_04170
NZ_CP011126.1	GeneMarkS+	CDS	442839	443138	.	-	0	ID=cds452;Parent=gene459;Dbxref=Genbank:WP_048875023.1;Name=WP_048875023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875023.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	443637	443990	.	+	.	ID=gene460;Name=CleRt_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08210
NZ_CP011126.1	GeneMarkS+	CDS	443637	443990	.	+	0	ID=cds453;Parent=gene460;Dbxref=Genbank:WP_048875133.1;Name=WP_048875133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875133.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	444131	444679	.	-	.	ID=gene461;Name=CleRt_RS02175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02175;old_locus_tag=CleRT_04190;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	444131	444679	.	-	0	ID=cds454;Parent=gene461;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771664.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	444967	445191	.	-	.	ID=gene462;Name=CleRt_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02180
NZ_CP011126.1	GeneMarkS+	CDS	444967	445191	.	-	0	ID=cds455;Parent=gene462;Dbxref=Genbank:WP_048875024.1;Name=WP_048875024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875024.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	445827	446039	.	-	.	ID=gene463;Name=CleRt_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08805
NZ_CP011126.1	Protein Homology	CDS	445827	446039	.	-	0	ID=cds456;Parent=gene463;Dbxref=Genbank:WP_082160407.1;Name=WP_082160407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00069.23;product=hypothetical protein;protein_id=WP_082160407.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	446761	449166	.	+	.	ID=gene464;Name=CleRt_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02190;old_locus_tag=CleRT_04210
NZ_CP011126.1	Protein Homology	CDS	446761	449166	.	+	0	ID=cds457;Parent=gene464;Dbxref=Genbank:WP_048875025.1;Name=WP_048875025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252732.1;product=outer membrane protein assembly factor BamA;protein_id=WP_048875025.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	449245	449742	.	+	.	ID=gene465;Name=CleRt_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02195;old_locus_tag=CleRT_04220
NZ_CP011126.1	Protein Homology	CDS	449245	449742	.	+	0	ID=cds458;Parent=gene465;Dbxref=Genbank:WP_048875026.1;Name=WP_048875026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771662.1;product=membrane protein;protein_id=WP_048875026.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	449757	450809	.	+	.	ID=gene466;Name=CleRt_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02200;old_locus_tag=CleRT_04230
NZ_CP011126.1	Protein Homology	CDS	449757	450809	.	+	0	ID=cds459;Parent=gene466;Dbxref=Genbank:WP_082160497.1;Name=WP_082160497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016985090.1;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_082160497.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	450781	451227	.	+	.	ID=gene467;Name=CleRt_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02205;old_locus_tag=CleRT_04240
NZ_CP011126.1	Protein Homology	CDS	450781	451227	.	+	0	ID=cds460;Parent=gene467;Dbxref=Genbank:WP_048875027.1;Name=WP_048875027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015279716.1;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;protein_id=WP_048875027.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	451220	452032	.	+	.	ID=gene468;Name=CleRt_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02210;old_locus_tag=CleRT_04250
NZ_CP011126.1	Protein Homology	CDS	451220	452032	.	+	0	ID=cds461;Parent=gene468;Dbxref=Genbank:WP_048875028.1;Name=WP_048875028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771657.1;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_048875028.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	453155	453382	.	-	.	ID=gene469;Name=CleRt_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08215
NZ_CP011126.1	GeneMarkS+	CDS	453155	453382	.	-	0	ID=cds462;Parent=gene469;Dbxref=Genbank:WP_053097834.1;Name=WP_053097834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097834.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	453388	453738	.	-	.	ID=gene470;Name=CleRt_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08220
NZ_CP011126.1	GeneMarkS+	CDS	453388	453738	.	-	0	ID=cds463;Parent=gene470;Dbxref=Genbank:WP_053097836.1;Name=WP_053097836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097836.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	453716	453787	.	-	.	ID=gene471;Name=CleRt_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08810
NZ_CP011126.1	Protein Homology	CDS	453716	453787	.	-	0	ID=cds464;Parent=gene471;Dbxref=Genbank:WP_082160498.1;Name=WP_082160498.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13645.4;product=hypothetical protein;protein_id=WP_082160498.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	454110	454292	.	-	.	ID=gene472;Name=CleRt_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08225
NZ_CP011126.1	GeneMarkS+	CDS	454110	454292	.	-	0	ID=cds465;Parent=gene472;Dbxref=Genbank:WP_053097838.1;Name=WP_053097838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097838.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	454419	455555	.	-	.	ID=gene473;Name=CleRt_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02220;old_locus_tag=CleRT_04280
NZ_CP011126.1	Protein Homology	CDS	454419	455555	.	-	0	ID=cds466;Parent=gene473;Dbxref=Genbank:WP_048875029.1;Name=WP_048875029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570233.1;product=lipid-A-disaccharide synthase;protein_id=WP_048875029.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	455557	456531	.	-	.	ID=gene474;Name=CleRt_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02225;old_locus_tag=CleRT_04290
NZ_CP011126.1	Protein Homology	CDS	455557	456531	.	-	0	ID=cds467;Parent=gene474;Dbxref=Genbank:WP_048875030.1;Name=WP_048875030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252731.1;product=gfo/Idh/MocA family oxidoreductase;protein_id=WP_048875030.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	456741	457231	.	+	.	ID=gene475;Name=CleRt_RS02230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02230;old_locus_tag=CleRT_04300;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	456741	457231	.	+	0	ID=cds468;Parent=gene475;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019232076.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	457238	457384	.	-	.	ID=gene476;Name=CleRt_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02235;old_locus_tag=CleRT_04310
NZ_CP011126.1	Protein Homology	CDS	457238	457384	.	-	0	ID=cds469;Parent=gene476;Dbxref=Genbank:WP_048875031.1;Name=WP_048875031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769376.1;product=entericidin%2C EcnA/B family;protein_id=WP_048875031.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	457541	457987	.	+	.	ID=gene477;Name=CleRt_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02240;old_locus_tag=CleRT_04320
NZ_CP011126.1	Protein Homology	CDS	457541	457987	.	+	0	ID=cds470;Parent=gene477;Dbxref=Genbank:WP_048875032.1;Name=WP_048875032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771930.1;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_048875032.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	459399	459926	.	+	.	ID=gene478;Name=CleRt_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02245;old_locus_tag=CleRT_04330
NZ_CP011126.1	Protein Homology	CDS	459399	459926	.	+	0	ID=cds471;Parent=gene478;Dbxref=Genbank:WP_048875033.1;Name=WP_048875033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019642017.1;product=inorganic diphosphatase;protein_id=WP_048875033.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	459941	463084	.	+	.	ID=gene479;Name=CleRt_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02250;old_locus_tag=CleRT_04340
NZ_CP011126.1	Protein Homology	CDS	459941	463084	.	+	0	ID=cds472;Parent=gene479;Dbxref=Genbank:WP_048875034.1;Name=WP_048875034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771924.1;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_048875034.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	463222	463913	.	+	.	ID=gene480;Name=CleRt_RS02255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02255;old_locus_tag=CleRT_04350;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	463222	463913	.	+	0	ID=cds473;Parent=gene480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957701.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	464061	467903	.	+	.	ID=gene481;Name=CleRt_RS02260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02260;old_locus_tag=CleRT_04360;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	464061	467903	.	+	0	ID=cds474;Parent=gene481;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220297.1;product=phosphoribosylformylglycinamidine synthase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	468087	468392	.	+	.	ID=gene482;Name=CleRt_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02265
NZ_CP011126.1	GeneMarkS+	CDS	468087	468392	.	+	0	ID=cds475;Parent=gene482;Dbxref=Genbank:WP_048875035.1;Name=WP_048875035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875035.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	470381	470782	.	+	.	ID=gene483;Name=CleRt_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02270;old_locus_tag=CleRT_04380
NZ_CP011126.1	GeneMarkS+	CDS	470381	470782	.	+	0	ID=cds476;Parent=gene483;Dbxref=Genbank:WP_048875036.1;Name=WP_048875036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875036.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	471254	471616	.	+	.	ID=gene484;Name=CleRt_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02275
NZ_CP011126.1	Protein Homology	CDS	471254	471616	.	+	0	ID=cds477;Parent=gene484;Dbxref=Genbank:WP_082160408.1;Name=WP_082160408.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08448.8;product=hypothetical protein;protein_id=WP_082160408.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	471971	472291	.	+	.	ID=gene485;Name=CleRt_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02280
NZ_CP011126.1	Protein Homology	CDS	471971	472291	.	+	0	ID=cds478;Parent=gene485;Dbxref=Genbank:WP_048875038.1;Name=WP_048875038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02518.24;product=ATP-binding protein;protein_id=WP_048875038.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	473048	473233	.	-	.	ID=gene486;Name=CleRt_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02285;old_locus_tag=CleRT_04400
NZ_CP011126.1	Protein Homology	CDS	473048	473233	.	-	0	ID=cds479;Parent=gene486;Dbxref=Genbank:WP_048875039.1;Name=WP_048875039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771921.1;product=hypothetical protein;protein_id=WP_048875039.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	473349	474485	.	-	.	ID=gene487;Name=CleRt_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02290;old_locus_tag=CleRT_04410
NZ_CP011126.1	Protein Homology	CDS	473349	474485	.	-	0	ID=cds480;Parent=gene487;Dbxref=Genbank:WP_048875040.1;Name=WP_048875040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570223.1;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_048875040.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	474485	475465	.	-	.	ID=gene488;Name=CleRt_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02295;old_locus_tag=CleRT_04420
NZ_CP011126.1	Protein Homology	CDS	474485	475465	.	-	0	ID=cds481;Parent=gene488;Dbxref=Genbank:WP_048875041.1;Name=WP_048875041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771912.1;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_048875041.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	475462	476544	.	-	.	ID=gene489;Name=CleRt_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02300;old_locus_tag=CleRT_04430
NZ_CP011126.1	Protein Homology	CDS	475462	476544	.	-	0	ID=cds482;Parent=gene489;Dbxref=Genbank:WP_048875042.1;Name=WP_048875042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771911.1;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_048875042.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	476541	477641	.	-	.	ID=gene490;Name=CleRt_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02305;old_locus_tag=CleRT_04440
NZ_CP011126.1	Protein Homology	CDS	476541	477641	.	-	0	ID=cds483;Parent=gene490;Dbxref=Genbank:WP_048875043.1;Name=WP_048875043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771910.1;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_048875043.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	477703	478464	.	+	.	ID=gene491;Name=CleRt_RS02310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02310;old_locus_tag=CleRT_04450;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	477703	478464	.	+	0	ID=cds484;Parent=gene491;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570221.1;product=glycerophosphoryl diester phosphodiesterase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	478464	479528	.	+	.	ID=gene492;Name=CleRt_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02315;old_locus_tag=CleRT_04460
NZ_CP011126.1	Protein Homology	CDS	478464	479528	.	+	0	ID=cds485;Parent=gene492;Dbxref=Genbank:WP_048875044.1;Name=WP_048875044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570220.1;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_048875044.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	479887	480495	.	+	.	ID=gene493;Name=CleRt_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02320;old_locus_tag=CleRT_04470
NZ_CP011126.1	Protein Homology	CDS	479887	480495	.	+	0	ID=cds486;Parent=gene493;Dbxref=Genbank:WP_048875045.1;Name=WP_048875045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771896.1;product=riboflavin synthase;protein_id=WP_048875045.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	480479	481714	.	+	.	ID=gene494;Name=CleRt_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02325;old_locus_tag=CleRT_04480
NZ_CP011126.1	Protein Homology	CDS	480479	481714	.	+	0	ID=cds487;Parent=gene494;Dbxref=Genbank:WP_048875046.1;Name=WP_048875046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996676.1;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_048875046.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	481698	482147	.	+	.	ID=gene495;Name=CleRt_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02330;old_locus_tag=CleRT_04490
NZ_CP011126.1	Protein Homology	CDS	481698	482147	.	+	0	ID=cds488;Parent=gene495;Dbxref=Genbank:WP_048875047.1;Name=WP_048875047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771892.1;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_048875047.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	482140	483273	.	+	.	ID=gene496;Name=CleRt_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02335;old_locus_tag=CleRT_04500
NZ_CP011126.1	Protein Homology	CDS	482140	483273	.	+	0	ID=cds489;Parent=gene496;Dbxref=Genbank:WP_082160409.1;Name=WP_082160409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957716.1;product=AI-2E family transporter;protein_id=WP_082160409.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	483299	483637	.	-	.	ID=gene497;Name=CleRt_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02340;old_locus_tag=CleRT_04510
NZ_CP011126.1	Protein Homology	CDS	483299	483637	.	-	0	ID=cds490;Parent=gene497;Dbxref=Genbank:WP_048875048.1;Name=WP_048875048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771886.1;product=nucleoid-associated protein%2C YbaB/EbfC family;protein_id=WP_048875048.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	483653	484261	.	-	.	ID=gene498;Name=CleRt_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02345;old_locus_tag=CleRT_04520
NZ_CP011126.1	Protein Homology	CDS	483653	484261	.	-	0	ID=cds491;Parent=gene498;Dbxref=Genbank:WP_048875049.1;Name=WP_048875049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570215.1;product=recombination protein RecR;protein_id=WP_048875049.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	484273	484681	.	-	.	ID=gene499;Name=CleRt_RS02350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02350;old_locus_tag=CleRT_04530;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	484273	484681	.	-	0	ID=cds492;Parent=gene499;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771884.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	484729	486267	.	-	.	ID=gene500;Name=CleRt_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02355;old_locus_tag=CleRT_04540
NZ_CP011126.1	Protein Homology	CDS	484729	486267	.	-	0	ID=cds493;Parent=gene500;Dbxref=Genbank:WP_048875050.1;Name=WP_048875050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771883.1;product=DNA polymerase III subunit gamma/tau;protein_id=WP_048875050.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	486292	486386	.	-	.	ID=gene501;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CleRt_RS08815
NZ_CP011126.1	cmsearch	SRP_RNA	486292	486386	.	-	.	ID=rna7;Parent=gene501;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;product=signal recognition particle sRNA small type
NZ_CP011126.1	cmsearch	exon	486292	486386	.	-	.	ID=id8;Parent=rna7;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;product=signal recognition particle sRNA small type
NZ_CP011126.1	RefSeq	gene	486495	486585	.	-	.	ID=gene502;Name=CleRt_RS02365;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS02365;old_locus_tag=CleRT_t008
NZ_CP011126.1	tRNAscan-SE	tRNA	486495	486585	.	-	.	ID=rna8;Parent=gene502;anticodon=(pos:complement(486549..486551));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	tRNAscan-SE	exon	486495	486585	.	-	.	ID=id9;Parent=rna8;anticodon=(pos:complement(486549..486551));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	RefSeq	pseudogene	486827	487955	.	-	.	ID=gene503;Name=CleRt_RS02370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02370;old_locus_tag=CleRT_04550;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	486827	487955	.	-	0	ID=cds494;Parent=gene503;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015780939.1;product=succinyl-diaminopimelate desuccinylase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	487957	488775	.	-	.	ID=gene504;Name=CleRt_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02375;old_locus_tag=CleRT_04560
NZ_CP011126.1	Protein Homology	CDS	487957	488775	.	-	0	ID=cds495;Parent=gene504;Dbxref=Genbank:WP_048875052.1;Name=WP_048875052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003632517.1;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_048875052.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	488953	489026	.	+	.	ID=gene505;Name=CleRt_RS02380;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS02380;old_locus_tag=CleRT_t009
NZ_CP011126.1	tRNAscan-SE	tRNA	488953	489026	.	+	.	ID=rna9;Parent=gene505;anticodon=(pos:488987..488989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Pro
NZ_CP011126.1	tRNAscan-SE	exon	488953	489026	.	+	.	ID=id10;Parent=rna9;anticodon=(pos:488987..488989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Pro
NZ_CP011126.1	RefSeq	gene	489117	489190	.	+	.	ID=gene506;Name=CleRt_RS02385;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS02385;old_locus_tag=CleRT_t010
NZ_CP011126.1	tRNAscan-SE	tRNA	489117	489190	.	+	.	ID=rna10;Parent=gene506;anticodon=(pos:489151..489153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	tRNAscan-SE	exon	489117	489190	.	+	.	ID=id11;Parent=rna10;anticodon=(pos:489151..489153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	RefSeq	gene	489274	489351	.	+	.	ID=gene507;Name=CleRt_RS02390;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS02390;old_locus_tag=CleRT_t011
NZ_CP011126.1	tRNAscan-SE	tRNA	489274	489351	.	+	.	ID=rna11;Parent=gene507;anticodon=(pos:489307..489309);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-His
NZ_CP011126.1	tRNAscan-SE	exon	489274	489351	.	+	.	ID=id12;Parent=rna11;anticodon=(pos:489307..489309);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-His
NZ_CP011126.1	RefSeq	gene	489398	490828	.	+	.	ID=gene508;Name=CleRt_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02395;old_locus_tag=CleRT_04570
NZ_CP011126.1	Protein Homology	CDS	489398	490828	.	+	0	ID=cds496;Parent=gene508;Dbxref=Genbank:WP_048875053.1;Name=WP_048875053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996682.1;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_048875053.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	490882	492807	.	-	.	ID=gene509;Name=CleRt_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02400;old_locus_tag=CleRT_04580
NZ_CP011126.1	Protein Homology	CDS	490882	492807	.	-	0	ID=cds497;Parent=gene509;Dbxref=Genbank:WP_048875054.1;Name=WP_048875054.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00534.18;product=hypothetical protein;protein_id=WP_048875054.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	492830	494608	.	-	.	ID=gene510;Name=CleRt_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02405;old_locus_tag=CleRT_04590
NZ_CP011126.1	Protein Homology	CDS	492830	494608	.	-	0	ID=cds498;Parent=gene510;Dbxref=Genbank:WP_082160410.1;Name=WP_082160410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01536;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_082160410.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	494760	495122	.	-	.	ID=gene511;Name=CleRt_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02410;old_locus_tag=CleRT_04600
NZ_CP011126.1	GeneMarkS+	CDS	494760	495122	.	-	0	ID=cds499;Parent=gene511;Dbxref=Genbank:WP_048875056.1;Name=WP_048875056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875056.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	495196	495696	.	-	.	ID=gene512;Name=CleRt_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02415;old_locus_tag=CleRT_04610
NZ_CP011126.1	GeneMarkS+	CDS	495196	495696	.	-	0	ID=cds500;Parent=gene512;Dbxref=Genbank:WP_048875057.1;Name=WP_048875057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875057.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	495954	496172	.	+	.	ID=gene513;Name=CleRt_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02420
NZ_CP011126.1	GeneMarkS+	CDS	495954	496172	.	+	0	ID=cds501;Parent=gene513;Dbxref=Genbank:WP_048875058.1;Name=WP_048875058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875058.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	497296	499329	.	-	.	ID=gene514;Name=CleRt_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02425;old_locus_tag=CleRT_04630
NZ_CP011126.1	GeneMarkS+	CDS	497296	499329	.	-	0	ID=cds502;Parent=gene514;Dbxref=Genbank:WP_048875059.1;Name=WP_048875059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875059.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	499354	500121	.	-	.	ID=gene515;Name=CleRt_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02430;old_locus_tag=CleRT_04640
NZ_CP011126.1	Protein Homology	CDS	499354	500121	.	-	0	ID=cds503;Parent=gene515;Dbxref=Genbank:WP_048875060.1;Name=WP_048875060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009458572.1;product=hypothetical protein;protein_id=WP_048875060.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	500140	500931	.	-	.	ID=gene516;Name=CleRt_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02435;old_locus_tag=CleRT_04650
NZ_CP011126.1	Protein Homology	CDS	500140	500931	.	-	0	ID=cds504;Parent=gene516;Dbxref=Genbank:WP_048875061.1;Name=WP_048875061.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01061.22;product=hypothetical protein;protein_id=WP_048875061.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	502356	502634	.	+	.	ID=gene517;Name=CleRt_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02440;old_locus_tag=CleRT_04670
NZ_CP011126.1	GeneMarkS+	CDS	502356	502634	.	+	0	ID=cds505;Parent=gene517;Dbxref=Genbank:WP_048875062.1;Name=WP_048875062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875062.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	502641	503180	.	-	.	ID=gene518;Name=CleRt_RS08820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08820;old_locus_tag=CleRT_04680;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	502641	503180	.	-	0	ID=cds506;Parent=gene518;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017018365.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	503868	504173	.	+	.	ID=gene519;Name=CleRt_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02450
NZ_CP011126.1	Protein Homology	CDS	503868	504173	.	+	0	ID=cds507;Parent=gene519;Dbxref=Genbank:WP_048875063.1;Name=WP_048875063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02679.13;product=hypothetical protein;protein_id=WP_048875063.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	504169	504387	.	+	.	ID=gene520;Name=CleRt_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08825
NZ_CP011126.1	Protein Homology	CDS	504169	504387	.	+	0	ID=cds508;Parent=gene520;Dbxref=Genbank:WP_082160411.1;Name=WP_082160411.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02679.13;product=hypothetical protein;protein_id=WP_082160411.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	504377	505165	.	+	.	ID=gene521;Name=CleRt_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02455
NZ_CP011126.1	GeneMarkS+	CDS	504377	505165	.	+	0	ID=cds509;Parent=gene521;Dbxref=Genbank:WP_048875064.1;Name=WP_048875064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875064.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	505514	505798	.	+	.	ID=gene522;Name=CleRt_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02460
NZ_CP011126.1	Protein Homology	CDS	505514	505798	.	+	0	ID=cds510;Parent=gene522;Dbxref=Genbank:WP_082160412.1;Name=WP_082160412.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14698.4;product=hypothetical protein;protein_id=WP_082160412.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	507143	507298	.	+	.	ID=gene523;Name=CleRt_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08830
NZ_CP011126.1	Protein Homology	CDS	507143	507298	.	+	0	ID=cds511;Parent=gene523;Dbxref=Genbank:WP_082160413.1;Name=WP_082160413.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00881.22;product=hypothetical protein;protein_id=WP_082160413.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	507650	507859	.	+	.	ID=gene524;Name=CleRt_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02465
NZ_CP011126.1	GeneMarkS+	CDS	507650	507859	.	+	0	ID=cds512;Parent=gene524;Dbxref=Genbank:WP_048875066.1;Name=WP_048875066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875066.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	508660	508857	.	-	.	ID=gene525;Name=CleRt_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02470
NZ_CP011126.1	GeneMarkS+	CDS	508660	508857	.	-	0	ID=cds513;Parent=gene525;Dbxref=Genbank:WP_048875067.1;Name=WP_048875067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875067.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	512613	512822	.	+	.	ID=gene526;Name=CleRt_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02475
NZ_CP011126.1	Protein Homology	CDS	512613	512822	.	+	0	ID=cds514;Parent=gene526;Dbxref=Genbank:WP_048875068.1;Name=WP_048875068.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03060.13;product=hypothetical protein;protein_id=WP_048875068.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	512963	513196	.	+	.	ID=gene527;Name=CleRt_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02480
NZ_CP011126.1	GeneMarkS+	CDS	512963	513196	.	+	0	ID=cds515;Parent=gene527;Dbxref=Genbank:WP_048875069.1;Name=WP_048875069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875069.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	513178	513438	.	+	.	ID=gene528;Name=CleRt_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02485
NZ_CP011126.1	Protein Homology	CDS	513178	513438	.	+	0	ID=cds516;Parent=gene528;Dbxref=Genbank:WP_082160414.1;Name=WP_082160414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03060.13;product=nitronate monooxygenase;protein_id=WP_082160414.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	513644	514044	.	-	.	ID=gene529;Name=CleRt_RS08835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08835;old_locus_tag=CleRT_04760;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	513644	514044	.	-	0	ID=cds517;Parent=gene529;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771201.1;product=glyoxalase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	514664	514999	.	+	.	ID=gene530;Name=CleRt_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02490;old_locus_tag=CleRT_04770
NZ_CP011126.1	GeneMarkS+	CDS	514664	514999	.	+	0	ID=cds518;Parent=gene530;Dbxref=Genbank:WP_048875071.1;Name=WP_048875071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875071.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	515618	515690	.	+	.	ID=gene531;Name=CleRt_RS02495;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS02495;old_locus_tag=CleRT_t012
NZ_CP011126.1	tRNAscan-SE	tRNA	515618	515690	.	+	.	ID=rna12;Parent=gene531;anticodon=(pos:515651..515653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Lys
NZ_CP011126.1	tRNAscan-SE	exon	515618	515690	.	+	.	ID=id13;Parent=rna12;anticodon=(pos:515651..515653);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Lys
NZ_CP011126.1	RefSeq	gene	515764	516066	.	-	.	ID=gene532;Name=CleRt_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02500
NZ_CP011126.1	Protein Homology	CDS	515764	516066	.	-	0	ID=cds519;Parent=gene532;Dbxref=Genbank:WP_082160415.1;Name=WP_082160415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019349936.1;product=site-specific integrase;protein_id=WP_082160415.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	516053	516343	.	-	.	ID=gene533;Name=CleRt_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02505
NZ_CP011126.1	GeneMarkS+	CDS	516053	516343	.	-	0	ID=cds520;Parent=gene533;Dbxref=Genbank:WP_048875072.1;Name=WP_048875072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875072.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	516369	516641	.	-	.	ID=gene534;Name=CleRt_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02510
NZ_CP011126.1	GeneMarkS+	CDS	516369	516641	.	-	0	ID=cds521;Parent=gene534;Dbxref=Genbank:WP_048875073.1;Name=WP_048875073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875073.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	518224	518499	.	-	.	ID=gene535;Name=CleRt_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02515;old_locus_tag=CleRT_04800
NZ_CP011126.1	GeneMarkS+	CDS	518224	518499	.	-	0	ID=cds522;Parent=gene535;Dbxref=Genbank:WP_048875074.1;Name=WP_048875074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875074.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	518471	518875	.	-	.	ID=gene536;Name=CleRt_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02520;old_locus_tag=CleRT_04810
NZ_CP011126.1	Protein Homology	CDS	518471	518875	.	-	0	ID=cds523;Parent=gene536;Dbxref=Genbank:WP_048875075.1;Name=WP_048875075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220330.1;product=DUF3775 domain-containing protein;protein_id=WP_048875075.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	519146	520336	.	+	.	ID=gene537;Name=CleRt_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02525;old_locus_tag=CleRT_04820
NZ_CP011126.1	Protein Homology	CDS	519146	520336	.	+	0	ID=cds524;Parent=gene537;Dbxref=Genbank:WP_048875076.1;Name=WP_048875076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771800.1;product=type III PLP-dependent enzyme;protein_id=WP_048875076.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	520365	521414	.	+	.	ID=gene538;Name=CleRt_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02530;old_locus_tag=CleRT_04830
NZ_CP011126.1	Protein Homology	CDS	520365	521414	.	+	0	ID=cds525;Parent=gene538;Dbxref=Genbank:WP_048875077.1;Name=WP_048875077.1;Note=transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771799.1;product=deoxyhypusine synthase;protein_id=WP_048875077.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	521423	522304	.	+	.	ID=gene539;Name=CleRt_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02535;old_locus_tag=CleRT_04840
NZ_CP011126.1	Protein Homology	CDS	521423	522304	.	+	0	ID=cds526;Parent=gene539;Dbxref=Genbank:WP_048875078.1;Name=WP_048875078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006997704.1;product=agmatinase;protein_id=WP_048875078.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	523218	523601	.	-	.	ID=gene540;Name=CleRt_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02540
NZ_CP011126.1	GeneMarkS+	CDS	523218	523601	.	-	0	ID=cds527;Parent=gene540;Dbxref=Genbank:WP_048875079.1;Name=WP_048875079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875079.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	523801	524118	.	-	.	ID=gene541;Name=CleRt_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02545
NZ_CP011126.1	Protein Homology	CDS	523801	524118	.	-	0	ID=cds528;Parent=gene541;Dbxref=Genbank:WP_082160416.1;Name=WP_082160416.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02776.16;product=hypothetical protein;protein_id=WP_082160416.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	524613	525402	.	+	.	ID=gene542;Name=CleRt_RS08235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08235;old_locus_tag=CleRT_04870;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	524613	525402	.	+	0	ID=cds529;Parent=gene542;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996714.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	525402	526202	.	+	.	ID=gene543;Name=CleRt_RS02555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02555;old_locus_tag=CleRT_04880;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	525402	526202	.	+	0	ID=cds530;Parent=gene543;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771788.1;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	526214	526639	.	+	.	ID=gene544;Name=CleRt_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02560
NZ_CP011126.1	Protein Homology	CDS	526214	526639	.	+	0	ID=cds531;Parent=gene544;Dbxref=Genbank:WP_082160417.1;Name=WP_082160417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02470.18;product=MCE family protein;protein_id=WP_082160417.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	527732	528167	.	-	.	ID=gene545;Name=CleRt_RS08840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08840;old_locus_tag=CleRT_04910;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	527732	528167	.	-	0	ID=cds532;Parent=gene545;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570847.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	528454	528672	.	+	.	ID=gene546;Name=CleRt_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08240
NZ_CP011126.1	GeneMarkS+	CDS	528454	528672	.	+	0	ID=cds533;Parent=gene546;Dbxref=Genbank:WP_053097844.1;Name=WP_053097844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097844.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	528873	529334	.	-	.	ID=gene547;Name=CleRt_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02570;old_locus_tag=CleRT_04930
NZ_CP011126.1	GeneMarkS+	CDS	528873	529334	.	-	0	ID=cds534;Parent=gene547;Dbxref=Genbank:WP_053097847.1;Name=WP_053097847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097847.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	529585	529670	.	+	.	ID=gene548;Name=CleRt_RS02575;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS02575;old_locus_tag=CleRT_t013
NZ_CP011126.1	tRNAscan-SE	tRNA	529585	529670	.	+	.	ID=rna13;Parent=gene548;anticodon=(pos:529619..529621);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	tRNAscan-SE	exon	529585	529670	.	+	.	ID=id14;Parent=rna13;anticodon=(pos:529619..529621);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	RefSeq	gene	529786	531102	.	+	.	ID=gene549;Name=CleRt_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02580;old_locus_tag=CleRT_04940
NZ_CP011126.1	Protein Homology	CDS	529786	531102	.	+	0	ID=cds535;Parent=gene549;Dbxref=Genbank:WP_048875082.1;Name=WP_048875082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772899.1;product=trigger factor;protein_id=WP_048875082.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	531105	531692	.	+	.	ID=gene550;Name=CleRt_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02585;old_locus_tag=CleRT_04950
NZ_CP011126.1	Protein Homology	CDS	531105	531692	.	+	0	ID=cds536;Parent=gene550;Dbxref=Genbank:WP_048875772.1;Name=WP_048875772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771772.1;product=ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP;protein_id=WP_048875772.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	531748	533010	.	+	.	ID=gene551;Name=CleRt_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02590;old_locus_tag=CleRT_04960
NZ_CP011126.1	Protein Homology	CDS	531748	533010	.	+	0	ID=cds537;Parent=gene551;Dbxref=Genbank:WP_048875083.1;Name=WP_048875083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017701334.1;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_048875083.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	533024	535477	.	+	.	ID=gene552;Name=CleRt_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02595;old_locus_tag=CleRT_04970
NZ_CP011126.1	Protein Homology	CDS	533024	535477	.	+	0	ID=cds538;Parent=gene552;Dbxref=Genbank:WP_048875084.1;Name=WP_048875084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957770.1;product=endopeptidase La;protein_id=WP_048875084.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	535493	536815	.	+	.	ID=gene553;Name=CleRt_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02600;old_locus_tag=CleRT_04980
NZ_CP011126.1	Protein Homology	CDS	535493	536815	.	+	0	ID=cds539;Parent=gene553;Dbxref=Genbank:WP_048875773.1;Name=WP_048875773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570184.1;product=metalloprotease PmbA;protein_id=WP_048875773.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	537587	537829	.	+	.	ID=gene554;Name=CleRt_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02605;old_locus_tag=CleRT_05000
NZ_CP011126.1	GeneMarkS+	CDS	537587	537829	.	+	0	ID=cds540;Parent=gene554;Dbxref=Genbank:WP_048875085.1;Name=WP_048875085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875085.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	538866	539135	.	-	.	ID=gene555;Name=CleRt_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02610;old_locus_tag=CleRT_05020
NZ_CP011126.1	Protein Homology	CDS	538866	539135	.	-	0	ID=cds541;Parent=gene555;Dbxref=Genbank:WP_048875086.1;Name=WP_048875086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007883792.1;product=HPr family phosphocarrier protein;protein_id=WP_048875086.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	539145	539678	.	-	.	ID=gene556;Name=CleRt_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02615;old_locus_tag=CleRT_05030
NZ_CP011126.1	Protein Homology	CDS	539145	539678	.	-	0	ID=cds542;Parent=gene556;Dbxref=Genbank:WP_048875774.1;Name=WP_048875774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771767.1;product=serine kinase;protein_id=WP_048875774.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	539702	539992	.	-	.	ID=gene557;Name=CleRt_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02620;old_locus_tag=CleRT_05040
NZ_CP011126.1	Protein Homology	CDS	539702	539992	.	-	0	ID=cds543;Parent=gene557;Dbxref=Genbank:WP_048875087.1;Name=WP_048875087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771766.1;product=ribosomal subunit interface protein;protein_id=WP_048875087.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	540059	540781	.	-	.	ID=gene558;Name=CleRt_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02625;old_locus_tag=CleRT_05050
NZ_CP011126.1	Protein Homology	CDS	540059	540781	.	-	0	ID=cds544;Parent=gene558;Dbxref=Genbank:WP_048875088.1;Name=WP_048875088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091254.1;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_048875088.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	540787	541240	.	-	.	ID=gene559;Name=CleRt_RS02630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02630;old_locus_tag=CleRT_05060;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	540787	541240	.	-	0	ID=cds545;Parent=gene559;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957774.1;product=lipopolysaccharide transport periplasmic protein LptA;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	541289	541873	.	-	.	ID=gene560;Name=CleRt_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02635;old_locus_tag=CleRT_05070
NZ_CP011126.1	Protein Homology	CDS	541289	541873	.	-	0	ID=cds546;Parent=gene560;Dbxref=Genbank:WP_048875089.1;Name=WP_048875089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772879.1;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_048875089.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	541870	542367	.	-	.	ID=gene561;Name=CleRt_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02640;old_locus_tag=CleRT_05080
NZ_CP011126.1	Protein Homology	CDS	541870	542367	.	-	0	ID=cds547;Parent=gene561;Dbxref=Genbank:WP_048875090.1;Name=WP_048875090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372086.1;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=WP_048875090.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	542373	543347	.	-	.	ID=gene562;Name=CleRt_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02645;old_locus_tag=CleRT_05090
NZ_CP011126.1	Protein Homology	CDS	542373	543347	.	-	0	ID=cds548;Parent=gene562;Dbxref=Genbank:WP_048875091.1;Name=WP_048875091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771757.1;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_048875091.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	543421	544209	.	+	.	ID=gene563;Name=CleRt_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02650;old_locus_tag=CleRT_05100
NZ_CP011126.1	Protein Homology	CDS	543421	544209	.	+	0	ID=cds549;Parent=gene563;Dbxref=Genbank:WP_048875092.1;Name=WP_048875092.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003094343.1;product=ABC transporter ATP-binding protein;protein_id=WP_048875092.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	544206	544988	.	+	.	ID=gene564;Name=CleRt_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02655;old_locus_tag=CleRT_05110
NZ_CP011126.1	Protein Homology	CDS	544206	544988	.	+	0	ID=cds550;Parent=gene564;Dbxref=Genbank:WP_048875093.1;Name=WP_048875093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010946578.1;product=ABC transporter permease;protein_id=WP_048875093.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	545014	545445	.	+	.	ID=gene565;Name=CleRt_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02660;old_locus_tag=CleRT_05120
NZ_CP011126.1	Protein Homology	CDS	545014	545445	.	+	0	ID=cds551;Parent=gene565;Dbxref=Genbank:WP_048875775.1;Name=WP_048875775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010597852.1;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_048875775.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	545483	546136	.	+	.	ID=gene566;Name=CleRt_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02665;old_locus_tag=CleRT_05130
NZ_CP011126.1	Protein Homology	CDS	545483	546136	.	+	0	ID=cds552;Parent=gene566;Dbxref=Genbank:WP_048875094.1;Name=WP_048875094.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05494.10;product=hypothetical protein;protein_id=WP_048875094.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	546136	546411	.	+	.	ID=gene567;Name=CleRt_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02670;old_locus_tag=CleRT_05140
NZ_CP011126.1	Protein Homology	CDS	546136	546411	.	+	0	ID=cds553;Parent=gene567;Dbxref=Genbank:WP_048875095.1;Name=WP_048875095.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01740.19;product=anti-sigma factor antagonist;protein_id=WP_048875095.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	546418	547722	.	+	.	ID=gene568;Name=CleRt_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02675;old_locus_tag=CleRT_05150
NZ_CP011126.1	Protein Homology	CDS	546418	547722	.	+	0	ID=cds554;Parent=gene568;Dbxref=Genbank:WP_048875096.1;Name=WP_048875096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771755.1;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_048875096.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	547729	548613	.	-	.	ID=gene569;Name=CleRt_RS08845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08845;old_locus_tag=CleRT_05160;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	547729	548613	.	-	0	ID=cds555;Parent=gene569;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771678.1;product=quinol oxidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	548870	550290	.	-	.	ID=gene570;Name=CleRt_RS08850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08850;old_locus_tag=CleRT_05170;partial=true;pseudo=true;start_range=.,548870
NZ_CP011126.1	Protein Homology	CDS	548870	550290	.	-	0	ID=cds556;Parent=gene570;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769021.1;partial=true;product=multidrug transporter AcrB;pseudo=true;start_range=.,548870;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	550389	551339	.	-	.	ID=gene571;Name=CleRt_RS02685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02685;old_locus_tag=CleRT_05180;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	550389	551339	.	-	0	ID=cds557;Parent=gene571;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957780.1;product=efflux transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	551349	552701	.	-	.	ID=gene572;Name=CleRt_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02690;old_locus_tag=CleRT_05190
NZ_CP011126.1	Protein Homology	CDS	551349	552701	.	-	0	ID=cds558;Parent=gene572;Dbxref=Genbank:WP_048875097.1;Name=WP_048875097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570176.1;product=endopeptidase;protein_id=WP_048875097.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	552760	553484	.	-	.	ID=gene573;Name=CleRt_RS02695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02695;old_locus_tag=CleRT_05200;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	552760	553484	.	-	0	ID=cds559;Parent=gene573;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018054066.1;product=polyphenol oxidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	553468	554433	.	-	.	ID=gene574;Name=CleRt_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02700;old_locus_tag=CleRT_05210
NZ_CP011126.1	Protein Homology	CDS	553468	554433	.	-	0	ID=cds560;Parent=gene574;Dbxref=Genbank:WP_048875098.1;Name=WP_048875098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220490.1;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_048875098.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	554594	555364	.	+	.	ID=gene575;Name=CleRt_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02705;old_locus_tag=CleRT_05220
NZ_CP011126.1	Protein Homology	CDS	554594	555364	.	+	0	ID=cds561;Parent=gene575;Dbxref=Genbank:WP_048875099.1;Name=WP_048875099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769012.1;product=outer membrane protein assembly factor BamD;protein_id=WP_048875099.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	555378	555782	.	-	.	ID=gene576;Name=CleRt_RS02710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02710;old_locus_tag=CleRT_05230;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	555378	555782	.	-	0	ID=cds562;Parent=gene576;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769009.1;product=two-component system response regulator;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	556167	556786	.	+	.	ID=gene577;Name=CleRt_RS08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08855;old_locus_tag=CleRT_05250;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	556167	556786	.	+	0	ID=cds563;Parent=gene577;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957786.1;product=transcriptional regulator;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	556831	557430	.	+	.	ID=gene578;Name=CleRt_RS02715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02715;old_locus_tag=CleRT_05260;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	556831	557430	.	+	0	ID=cds564;Parent=gene578;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220486.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	558004	558201	.	+	.	ID=gene579;Name=CleRt_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08860
NZ_CP011126.1	Protein Homology	CDS	558004	558201	.	+	0	ID=cds565;Parent=gene579;Dbxref=Genbank:WP_082160418.1;Name=WP_082160418.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02771.14;product=hypothetical protein;protein_id=WP_082160418.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	558589	558768	.	+	.	ID=gene580;Name=CleRt_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02725
NZ_CP011126.1	GeneMarkS+	CDS	558589	558768	.	+	0	ID=cds566;Parent=gene580;Dbxref=Genbank:WP_048875101.1;Name=WP_048875101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875101.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	559049	559228	.	+	.	ID=gene581;Name=CleRt_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08865
NZ_CP011126.1	Protein Homology	CDS	559049	559228	.	+	0	ID=cds567;Parent=gene581;Dbxref=Genbank:WP_082160419.1;Name=WP_082160419.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09317.9;product=DUF1974 domain-containing protein;protein_id=WP_082160419.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	559182	559556	.	+	.	ID=gene582;Name=CleRt_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02730
NZ_CP011126.1	Protein Homology	CDS	559182	559556	.	+	0	ID=cds568;Parent=gene582;Dbxref=Genbank:WP_048875102.1;Name=WP_048875102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09317.9;product=DUF1974 domain-containing protein;protein_id=WP_048875102.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	560029	560352	.	+	.	ID=gene583;Name=CleRt_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02735
NZ_CP011126.1	GeneMarkS+	CDS	560029	560352	.	+	0	ID=cds569;Parent=gene583;Dbxref=Genbank:WP_048875103.1;Name=WP_048875103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875103.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	561119	561361	.	+	.	ID=gene584;Name=CleRt_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02740
NZ_CP011126.1	Protein Homology	CDS	561119	561361	.	+	0	ID=cds570;Parent=gene584;Dbxref=Genbank:WP_048875104.1;Name=WP_048875104.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13193.4;product=hypothetical protein;protein_id=WP_048875104.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	561433	561618	.	-	.	ID=gene585;Name=CleRt_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08255
NZ_CP011126.1	GeneMarkS+	CDS	561433	561618	.	-	0	ID=cds571;Parent=gene585;Dbxref=Genbank:WP_053097852.1;Name=WP_053097852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097852.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	562407	562670	.	-	.	ID=gene586;Name=CleRt_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08260
NZ_CP011126.1	GeneMarkS+	CDS	562407	562670	.	-	0	ID=cds572;Parent=gene586;Dbxref=Genbank:WP_053097854.1;Name=WP_053097854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097854.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	563210	563284	.	+	.	ID=gene587;Name=CleRt_RS02750;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS02750;old_locus_tag=CleRT_t014
NZ_CP011126.1	tRNAscan-SE	tRNA	563210	563284	.	+	.	ID=rna14;Parent=gene587;anticodon=(pos:563242..563244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Val
NZ_CP011126.1	tRNAscan-SE	exon	563210	563284	.	+	.	ID=id15;Parent=rna14;anticodon=(pos:563242..563244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Val
NZ_CP011126.1	RefSeq	gene	563544	563978	.	-	.	ID=gene588;Name=CleRt_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02755;old_locus_tag=CleRT_05300
NZ_CP011126.1	GeneMarkS+	CDS	563544	563978	.	-	0	ID=cds573;Parent=gene588;Dbxref=Genbank:WP_048875105.1;Name=WP_048875105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875105.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	564354	564578	.	+	.	ID=gene589;Name=CleRt_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02760
NZ_CP011126.1	GeneMarkS+	CDS	564354	564578	.	+	0	ID=cds574;Parent=gene589;Dbxref=Genbank:WP_048875106.1;Name=WP_048875106.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875106.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	565307	565558	.	+	.	ID=gene590;Name=CleRt_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02765
NZ_CP011126.1	GeneMarkS+	CDS	565307	565558	.	+	0	ID=cds575;Parent=gene590;Dbxref=Genbank:WP_048875107.1;Name=WP_048875107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875107.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	565555	566421	.	-	.	ID=gene591;Name=CleRt_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02770;old_locus_tag=CleRT_05320
NZ_CP011126.1	Protein Homology	CDS	565555	566421	.	-	0	ID=cds576;Parent=gene591;Dbxref=Genbank:WP_048875108.1;Name=WP_048875108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253433.1;product=aminodeoxychorismate lyase;protein_id=WP_048875108.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	566393	566986	.	-	.	ID=gene592;Name=CleRt_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02775;old_locus_tag=CleRT_05330
NZ_CP011126.1	Protein Homology	CDS	566393	566986	.	-	0	ID=cds577;Parent=gene592;Dbxref=Genbank:WP_048875109.1;Name=WP_048875109.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010279319.1;product=type 1 glutamine amidotransferase;protein_id=WP_048875109.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	567093	568505	.	+	.	ID=gene593;Name=CleRt_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02780;old_locus_tag=CleRT_05340
NZ_CP011126.1	Protein Homology	CDS	567093	568505	.	+	0	ID=cds578;Parent=gene593;Dbxref=Genbank:WP_048875110.1;Name=WP_048875110.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00553;product=aminodeoxychorismate synthase%2C component I;protein_id=WP_048875110.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	568683	568922	.	+	.	ID=gene594;Name=CleRt_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02785;old_locus_tag=CleRT_05350
NZ_CP011126.1	GeneMarkS+	CDS	568683	568922	.	+	0	ID=cds579;Parent=gene594;Dbxref=Genbank:WP_048875111.1;Name=WP_048875111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875111.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	569464	569826	.	-	.	ID=gene595;Name=CleRt_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02790;old_locus_tag=CleRT_05370
NZ_CP011126.1	GeneMarkS+	CDS	569464	569826	.	-	0	ID=cds580;Parent=gene595;Dbxref=Genbank:WP_048875112.1;Name=WP_048875112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875112.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	569887	570174	.	-	.	ID=gene596;Name=CleRt_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02795;old_locus_tag=CleRT_05380
NZ_CP011126.1	GeneMarkS+	CDS	569887	570174	.	-	0	ID=cds581;Parent=gene596;Dbxref=Genbank:WP_048875113.1;Name=WP_048875113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875113.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	570778	571008	.	-	.	ID=gene597;Name=CleRt_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02800;old_locus_tag=CleRT_05390
NZ_CP011126.1	GeneMarkS+	CDS	570778	571008	.	-	0	ID=cds582;Parent=gene597;Dbxref=Genbank:WP_048875114.1;Name=WP_048875114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875114.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	571447	573390	.	+	.	ID=gene598;Name=CleRt_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02805;old_locus_tag=CleRT_05400
NZ_CP011126.1	Protein Homology	CDS	571447	573390	.	+	0	ID=cds583;Parent=gene598;Dbxref=Genbank:WP_048875115.1;Name=WP_048875115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_040948163.1;product=threonine--tRNA ligase;protein_id=WP_048875115.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	573402	573959	.	+	.	ID=gene599;Name=CleRt_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02810;old_locus_tag=CleRT_05410
NZ_CP011126.1	Protein Homology	CDS	573402	573959	.	+	0	ID=cds584;Parent=gene599;Dbxref=Genbank:WP_048875116.1;Name=WP_048875116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013647985.1;product=translation initiation factor IF-3;protein_id=WP_048875116.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	573940	574134	.	+	.	ID=gene600;Name=CleRt_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02815;old_locus_tag=CleRT_05420
NZ_CP011126.1	Protein Homology	CDS	573940	574134	.	+	0	ID=cds585;Parent=gene600;Dbxref=Genbank:WP_048875117.1;Name=WP_048875117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220603.1;product=50S ribosomal protein L35;protein_id=WP_048875117.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	574170	574529	.	+	.	ID=gene601;Name=CleRt_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02820;old_locus_tag=CleRT_05430
NZ_CP011126.1	Protein Homology	CDS	574170	574529	.	+	0	ID=cds586;Parent=gene601;Dbxref=Genbank:WP_048875118.1;Name=WP_048875118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011759881.1;product=50S ribosomal protein L20;protein_id=WP_048875118.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	574543	575529	.	+	.	ID=gene602;Name=CleRt_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02825;old_locus_tag=CleRT_05440
NZ_CP011126.1	Protein Homology	CDS	574543	575529	.	+	0	ID=cds587;Parent=gene602;Dbxref=Genbank:WP_048875776.1;Name=WP_048875776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569882.1;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_048875776.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	575533	577914	.	+	.	ID=gene603;Name=CleRt_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02830;old_locus_tag=CleRT_05450
NZ_CP011126.1	Protein Homology	CDS	575533	577914	.	+	0	ID=cds588;Parent=gene603;Dbxref=Genbank:WP_048875119.1;Name=WP_048875119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770929.1;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_048875119.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	577918	578226	.	+	.	ID=gene604;Name=CleRt_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02835;old_locus_tag=CleRT_05460
NZ_CP011126.1	Protein Homology	CDS	577918	578226	.	+	0	ID=cds589;Parent=gene604;Dbxref=Genbank:WP_048875120.1;Name=WP_048875120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770927.1;product=integration host factor subunit alpha;protein_id=WP_048875120.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	578198	578575	.	+	.	ID=gene605;Name=CleRt_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02840;old_locus_tag=CleRT_05470
NZ_CP011126.1	Protein Homology	CDS	578198	578575	.	+	0	ID=cds590;Parent=gene605;Dbxref=Genbank:WP_048875121.1;Name=WP_048875121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770926.1;product=MerR family transcriptional regulator;protein_id=WP_048875121.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	578963	579036	.	+	.	ID=gene606;Name=CleRt_RS02845;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS02845;old_locus_tag=CleRT_t015
NZ_CP011126.1	tRNAscan-SE	tRNA	578963	579036	.	+	.	ID=rna15;Parent=gene606;anticodon=(pos:578997..578999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Pro
NZ_CP011126.1	tRNAscan-SE	exon	578963	579036	.	+	.	ID=id16;Parent=rna15;anticodon=(pos:578997..578999);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Pro
NZ_CP011126.1	RefSeq	gene	579325	579549	.	+	.	ID=gene607;Name=CleRt_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02850
NZ_CP011126.1	GeneMarkS+	CDS	579325	579549	.	+	0	ID=cds591;Parent=gene607;Dbxref=Genbank:WP_048875122.1;Name=WP_048875122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875122.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	579849	580049	.	+	.	ID=gene608;Name=CleRt_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02855;old_locus_tag=CleRT_05500
NZ_CP011126.1	Protein Homology	CDS	579849	580049	.	+	0	ID=cds592;Parent=gene608;Dbxref=Genbank:WP_082160420.1;Name=WP_082160420.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01439;product=hypothetical protein;protein_id=WP_082160420.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	580153	580428	.	+	.	ID=gene609;Name=CleRt_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02860;old_locus_tag=CleRT_05510
NZ_CP011126.1	GeneMarkS+	CDS	580153	580428	.	+	0	ID=cds593;Parent=gene609;Dbxref=Genbank:WP_048875124.1;Name=WP_048875124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875124.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	580735	580956	.	+	.	ID=gene610;Name=CleRt_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02865;old_locus_tag=CleRT_05520
NZ_CP011126.1	GeneMarkS+	CDS	580735	580956	.	+	0	ID=cds594;Parent=gene610;Dbxref=Genbank:WP_048875125.1;Name=WP_048875125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875125.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	582024	582275	.	+	.	ID=gene611;Name=CleRt_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02870;old_locus_tag=CleRT_05530
NZ_CP011126.1	GeneMarkS+	CDS	582024	582275	.	+	0	ID=cds595;Parent=gene611;Dbxref=Genbank:WP_048875126.1;Name=WP_048875126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875126.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	583425	583646	.	-	.	ID=gene612;Name=CleRt_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02875
NZ_CP011126.1	GeneMarkS+	CDS	583425	583646	.	-	0	ID=cds596;Parent=gene612;Dbxref=Genbank:WP_048875127.1;Name=WP_048875127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875127.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	585310	585897	.	-	.	ID=gene613;Name=CleRt_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02880
NZ_CP011126.1	GeneMarkS+	CDS	585310	585897	.	-	0	ID=cds597;Parent=gene613;Dbxref=Genbank:WP_048875128.1;Name=WP_048875128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875128.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	585967	586269	.	+	.	ID=gene614;Name=CleRt_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02885
NZ_CP011126.1	GeneMarkS+	CDS	585967	586269	.	+	0	ID=cds598;Parent=gene614;Dbxref=Genbank:WP_048875129.1;Name=WP_048875129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875129.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	586647	586832	.	+	.	ID=gene615;Name=CleRt_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02890
NZ_CP011126.1	GeneMarkS+	CDS	586647	586832	.	+	0	ID=cds599;Parent=gene615;Dbxref=Genbank:WP_048875130.1;Name=WP_048875130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875130.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	587178	587537	.	+	.	ID=gene616;Name=CleRt_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02895
NZ_CP011126.1	Protein Homology	CDS	587178	587537	.	+	0	ID=cds600;Parent=gene616;Dbxref=Genbank:WP_082160421.1;Name=WP_082160421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01244.19;product=hypothetical protein;protein_id=WP_082160421.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	588260	588376	.	-	.	ID=gene617;Name=CleRt_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08870
NZ_CP011126.1	Protein Homology	CDS	588260	588376	.	-	0	ID=cds601;Parent=gene617;Dbxref=Genbank:WP_082160422.1;Name=WP_082160422.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00196.17;product=hypothetical protein;protein_id=WP_082160422.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	589536	589752	.	-	.	ID=gene618;Name=CleRt_RS08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08875;old_locus_tag=CleRT_05590;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	589536	589752	.	-	0	ID=cds602;Parent=gene618;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011947063.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	589928	590101	.	+	.	ID=gene619;Name=CleRt_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08880;old_locus_tag=CleRT_05600
NZ_CP011126.1	Protein Homology	CDS	589928	590101	.	+	0	ID=cds603;Parent=gene619;Dbxref=Genbank:WP_082160423.1;Name=WP_082160423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997173.1;product=hypothetical protein;protein_id=WP_082160423.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	590103	590855	.	+	.	ID=gene620;Name=CleRt_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02900;old_locus_tag=CleRT_05610
NZ_CP011126.1	Protein Homology	CDS	590103	590855	.	+	0	ID=cds604;Parent=gene620;Dbxref=Genbank:WP_048875132.1;Name=WP_048875132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772753.1;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_048875132.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	591116	591469	.	+	.	ID=gene621;Name=CleRt_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02905
NZ_CP011126.1	GeneMarkS+	CDS	591116	591469	.	+	0	ID=cds605;Parent=gene621;Dbxref=Genbank:WP_048875133.1;Name=WP_048875133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875133.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	591610	592158	.	-	.	ID=gene622;Name=CleRt_RS02910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02910;old_locus_tag=CleRT_05630;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	591610	592158	.	-	0	ID=cds606;Parent=gene622;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771664.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	592446	592670	.	-	.	ID=gene623;Name=CleRt_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02915
NZ_CP011126.1	GeneMarkS+	CDS	592446	592670	.	-	0	ID=cds607;Parent=gene623;Dbxref=Genbank:WP_048875024.1;Name=WP_048875024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875024.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	593306	593518	.	-	.	ID=gene624;Name=CleRt_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08885
NZ_CP011126.1	Protein Homology	CDS	593306	593518	.	-	0	ID=cds608;Parent=gene624;Dbxref=Genbank:WP_082160407.1;Name=WP_082160407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00069.23;product=hypothetical protein;protein_id=WP_082160407.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	594240	596645	.	+	.	ID=gene625;Name=CleRt_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02925;old_locus_tag=CleRT_05650
NZ_CP011126.1	Protein Homology	CDS	594240	596645	.	+	0	ID=cds609;Parent=gene625;Dbxref=Genbank:WP_048875025.1;Name=WP_048875025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252732.1;product=outer membrane protein assembly factor BamA;protein_id=WP_048875025.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	596724	597221	.	+	.	ID=gene626;Name=CleRt_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02930;old_locus_tag=CleRT_05660
NZ_CP011126.1	Protein Homology	CDS	596724	597221	.	+	0	ID=cds610;Parent=gene626;Dbxref=Genbank:WP_048875026.1;Name=WP_048875026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771662.1;product=membrane protein;protein_id=WP_048875026.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	597236	598288	.	+	.	ID=gene627;Name=CleRt_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02935;old_locus_tag=CleRT_05670
NZ_CP011126.1	Protein Homology	CDS	597236	598288	.	+	0	ID=cds611;Parent=gene627;Dbxref=Genbank:WP_082160497.1;Name=WP_082160497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016985090.1;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_082160497.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	598260	598706	.	+	.	ID=gene628;Name=CleRt_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02940;old_locus_tag=CleRT_05680
NZ_CP011126.1	Protein Homology	CDS	598260	598706	.	+	0	ID=cds612;Parent=gene628;Dbxref=Genbank:WP_048875027.1;Name=WP_048875027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015279716.1;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;protein_id=WP_048875027.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	598699	599511	.	+	.	ID=gene629;Name=CleRt_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02945;old_locus_tag=CleRT_05690
NZ_CP011126.1	Protein Homology	CDS	598699	599511	.	+	0	ID=cds613;Parent=gene629;Dbxref=Genbank:WP_048875028.1;Name=WP_048875028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771657.1;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_048875028.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	600634	600861	.	-	.	ID=gene630;Name=CleRt_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08265
NZ_CP011126.1	GeneMarkS+	CDS	600634	600861	.	-	0	ID=cds614;Parent=gene630;Dbxref=Genbank:WP_053097834.1;Name=WP_053097834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097834.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	600867	601217	.	-	.	ID=gene631;Name=CleRt_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08270
NZ_CP011126.1	GeneMarkS+	CDS	600867	601217	.	-	0	ID=cds615;Parent=gene631;Dbxref=Genbank:WP_053097836.1;Name=WP_053097836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097836.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	601195	601266	.	-	.	ID=gene632;Name=CleRt_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08890
NZ_CP011126.1	Protein Homology	CDS	601195	601266	.	-	0	ID=cds616;Parent=gene632;Dbxref=Genbank:WP_082160498.1;Name=WP_082160498.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13645.4;product=hypothetical protein;protein_id=WP_082160498.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	601589	601771	.	-	.	ID=gene633;Name=CleRt_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08275
NZ_CP011126.1	GeneMarkS+	CDS	601589	601771	.	-	0	ID=cds617;Parent=gene633;Dbxref=Genbank:WP_053097838.1;Name=WP_053097838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097838.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	601898	603034	.	-	.	ID=gene634;Name=CleRt_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02955;old_locus_tag=CleRT_05720
NZ_CP011126.1	Protein Homology	CDS	601898	603034	.	-	0	ID=cds618;Parent=gene634;Dbxref=Genbank:WP_048875029.1;Name=WP_048875029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570233.1;product=lipid-A-disaccharide synthase;protein_id=WP_048875029.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	603036	604010	.	-	.	ID=gene635;Name=CleRt_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02960;old_locus_tag=CleRT_05730
NZ_CP011126.1	Protein Homology	CDS	603036	604010	.	-	0	ID=cds619;Parent=gene635;Dbxref=Genbank:WP_048875030.1;Name=WP_048875030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252731.1;product=gfo/Idh/MocA family oxidoreductase;protein_id=WP_048875030.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	604220	604710	.	+	.	ID=gene636;Name=CleRt_RS02965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02965;old_locus_tag=CleRT_05740;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	604220	604710	.	+	0	ID=cds620;Parent=gene636;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019232076.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	604717	604863	.	-	.	ID=gene637;Name=CleRt_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02970;old_locus_tag=CleRT_05750
NZ_CP011126.1	Protein Homology	CDS	604717	604863	.	-	0	ID=cds621;Parent=gene637;Dbxref=Genbank:WP_048875031.1;Name=WP_048875031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769376.1;product=entericidin%2C EcnA/B family;protein_id=WP_048875031.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	605020	605466	.	+	.	ID=gene638;Name=CleRt_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02975;old_locus_tag=CleRT_05760
NZ_CP011126.1	Protein Homology	CDS	605020	605466	.	+	0	ID=cds622;Parent=gene638;Dbxref=Genbank:WP_048875032.1;Name=WP_048875032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771930.1;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_048875032.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	606878	607405	.	+	.	ID=gene639;Name=CleRt_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02980;old_locus_tag=CleRT_05770
NZ_CP011126.1	Protein Homology	CDS	606878	607405	.	+	0	ID=cds623;Parent=gene639;Dbxref=Genbank:WP_048875033.1;Name=WP_048875033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019642017.1;product=inorganic diphosphatase;protein_id=WP_048875033.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	607420	610563	.	+	.	ID=gene640;Name=CleRt_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS02985;old_locus_tag=CleRT_05780
NZ_CP011126.1	Protein Homology	CDS	607420	610563	.	+	0	ID=cds624;Parent=gene640;Dbxref=Genbank:WP_048875034.1;Name=WP_048875034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771924.1;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_048875034.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	610701	611392	.	+	.	ID=gene641;Name=CleRt_RS02990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02990;old_locus_tag=CleRT_05790;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	610701	611392	.	+	0	ID=cds625;Parent=gene641;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957701.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	611540	615382	.	+	.	ID=gene642;Name=CleRt_RS02995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS02995;old_locus_tag=CleRT_05800;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	611540	615382	.	+	0	ID=cds626;Parent=gene642;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220297.1;product=phosphoribosylformylglycinamidine synthase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	615566	615871	.	+	.	ID=gene643;Name=CleRt_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03000
NZ_CP011126.1	GeneMarkS+	CDS	615566	615871	.	+	0	ID=cds627;Parent=gene643;Dbxref=Genbank:WP_048875035.1;Name=WP_048875035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875035.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	617860	618261	.	+	.	ID=gene644;Name=CleRt_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03005;old_locus_tag=CleRT_05820
NZ_CP011126.1	GeneMarkS+	CDS	617860	618261	.	+	0	ID=cds628;Parent=gene644;Dbxref=Genbank:WP_048875036.1;Name=WP_048875036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875036.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	618733	619095	.	+	.	ID=gene645;Name=CleRt_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03010
NZ_CP011126.1	Protein Homology	CDS	618733	619095	.	+	0	ID=cds629;Parent=gene645;Dbxref=Genbank:WP_082160408.1;Name=WP_082160408.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08448.8;product=hypothetical protein;protein_id=WP_082160408.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	619450	619770	.	+	.	ID=gene646;Name=CleRt_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03015
NZ_CP011126.1	Protein Homology	CDS	619450	619770	.	+	0	ID=cds630;Parent=gene646;Dbxref=Genbank:WP_048875038.1;Name=WP_048875038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02518.24;product=ATP-binding protein;protein_id=WP_048875038.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	620527	620712	.	-	.	ID=gene647;Name=CleRt_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03020;old_locus_tag=CleRT_05840
NZ_CP011126.1	Protein Homology	CDS	620527	620712	.	-	0	ID=cds631;Parent=gene647;Dbxref=Genbank:WP_048875039.1;Name=WP_048875039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771921.1;product=hypothetical protein;protein_id=WP_048875039.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	620828	621964	.	-	.	ID=gene648;Name=CleRt_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03025;old_locus_tag=CleRT_05850
NZ_CP011126.1	Protein Homology	CDS	620828	621964	.	-	0	ID=cds632;Parent=gene648;Dbxref=Genbank:WP_048875040.1;Name=WP_048875040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570223.1;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_048875040.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	621964	622944	.	-	.	ID=gene649;Name=CleRt_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03030;old_locus_tag=CleRT_05860
NZ_CP011126.1	Protein Homology	CDS	621964	622944	.	-	0	ID=cds633;Parent=gene649;Dbxref=Genbank:WP_048875041.1;Name=WP_048875041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771912.1;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_048875041.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	622941	624023	.	-	.	ID=gene650;Name=CleRt_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03035;old_locus_tag=CleRT_05870
NZ_CP011126.1	Protein Homology	CDS	622941	624023	.	-	0	ID=cds634;Parent=gene650;Dbxref=Genbank:WP_048875042.1;Name=WP_048875042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771911.1;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_048875042.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	624020	625120	.	-	.	ID=gene651;Name=CleRt_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03040;old_locus_tag=CleRT_05880
NZ_CP011126.1	Protein Homology	CDS	624020	625120	.	-	0	ID=cds635;Parent=gene651;Dbxref=Genbank:WP_048875043.1;Name=WP_048875043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771910.1;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_048875043.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	625182	625943	.	+	.	ID=gene652;Name=CleRt_RS03045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03045;old_locus_tag=CleRT_05890;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	625182	625943	.	+	0	ID=cds636;Parent=gene652;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570221.1;product=glycerophosphoryl diester phosphodiesterase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	625943	627007	.	+	.	ID=gene653;Name=CleRt_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03050;old_locus_tag=CleRT_05900
NZ_CP011126.1	Protein Homology	CDS	625943	627007	.	+	0	ID=cds637;Parent=gene653;Dbxref=Genbank:WP_048875044.1;Name=WP_048875044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570220.1;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_048875044.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	627366	627974	.	+	.	ID=gene654;Name=CleRt_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03055;old_locus_tag=CleRT_05910
NZ_CP011126.1	Protein Homology	CDS	627366	627974	.	+	0	ID=cds638;Parent=gene654;Dbxref=Genbank:WP_048875045.1;Name=WP_048875045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771896.1;product=riboflavin synthase;protein_id=WP_048875045.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	627958	629193	.	+	.	ID=gene655;Name=CleRt_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03060;old_locus_tag=CleRT_05920
NZ_CP011126.1	Protein Homology	CDS	627958	629193	.	+	0	ID=cds639;Parent=gene655;Dbxref=Genbank:WP_048875046.1;Name=WP_048875046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996676.1;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_048875046.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	629177	629626	.	+	.	ID=gene656;Name=CleRt_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03065;old_locus_tag=CleRT_05930
NZ_CP011126.1	Protein Homology	CDS	629177	629626	.	+	0	ID=cds640;Parent=gene656;Dbxref=Genbank:WP_048875047.1;Name=WP_048875047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771892.1;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_048875047.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	629619	630752	.	+	.	ID=gene657;Name=CleRt_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03070;old_locus_tag=CleRT_05940
NZ_CP011126.1	Protein Homology	CDS	629619	630752	.	+	0	ID=cds641;Parent=gene657;Dbxref=Genbank:WP_082160409.1;Name=WP_082160409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957716.1;product=AI-2E family transporter;protein_id=WP_082160409.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	630778	631116	.	-	.	ID=gene658;Name=CleRt_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03075;old_locus_tag=CleRT_05950
NZ_CP011126.1	Protein Homology	CDS	630778	631116	.	-	0	ID=cds642;Parent=gene658;Dbxref=Genbank:WP_048875048.1;Name=WP_048875048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771886.1;product=nucleoid-associated protein%2C YbaB/EbfC family;protein_id=WP_048875048.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	631132	631740	.	-	.	ID=gene659;Name=CleRt_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03080;old_locus_tag=CleRT_05960
NZ_CP011126.1	Protein Homology	CDS	631132	631740	.	-	0	ID=cds643;Parent=gene659;Dbxref=Genbank:WP_048875049.1;Name=WP_048875049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570215.1;product=recombination protein RecR;protein_id=WP_048875049.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	631752	632160	.	-	.	ID=gene660;Name=CleRt_RS03085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03085;old_locus_tag=CleRT_05970;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	631752	632160	.	-	0	ID=cds644;Parent=gene660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771884.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	632208	633746	.	-	.	ID=gene661;Name=CleRt_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03090;old_locus_tag=CleRT_05980
NZ_CP011126.1	Protein Homology	CDS	632208	633746	.	-	0	ID=cds645;Parent=gene661;Dbxref=Genbank:WP_048875050.1;Name=WP_048875050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771883.1;product=DNA polymerase III subunit gamma/tau;protein_id=WP_048875050.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	633771	633865	.	-	.	ID=gene662;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=CleRt_RS08895
NZ_CP011126.1	cmsearch	SRP_RNA	633771	633865	.	-	.	ID=rna16;Parent=gene662;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;product=signal recognition particle sRNA small type
NZ_CP011126.1	cmsearch	exon	633771	633865	.	-	.	ID=id17;Parent=rna16;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;product=signal recognition particle sRNA small type
NZ_CP011126.1	RefSeq	gene	633974	634064	.	-	.	ID=gene663;Name=CleRt_RS03100;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS03100;old_locus_tag=CleRT_t016
NZ_CP011126.1	tRNAscan-SE	tRNA	633974	634064	.	-	.	ID=rna17;Parent=gene663;anticodon=(pos:complement(634028..634030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	tRNAscan-SE	exon	633974	634064	.	-	.	ID=id18;Parent=rna17;anticodon=(pos:complement(634028..634030));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	RefSeq	pseudogene	634306	635434	.	-	.	ID=gene664;Name=CleRt_RS03105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03105;old_locus_tag=CleRT_05990;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	634306	635434	.	-	0	ID=cds646;Parent=gene664;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015780939.1;product=succinyl-diaminopimelate desuccinylase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	635436	636254	.	-	.	ID=gene665;Name=CleRt_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03110;old_locus_tag=CleRT_06000
NZ_CP011126.1	Protein Homology	CDS	635436	636254	.	-	0	ID=cds647;Parent=gene665;Dbxref=Genbank:WP_048875052.1;Name=WP_048875052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003632517.1;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_048875052.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	636432	636505	.	+	.	ID=gene666;Name=CleRt_RS03115;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS03115;old_locus_tag=CleRT_t017
NZ_CP011126.1	tRNAscan-SE	tRNA	636432	636505	.	+	.	ID=rna18;Parent=gene666;anticodon=(pos:636466..636468);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Pro
NZ_CP011126.1	tRNAscan-SE	exon	636432	636505	.	+	.	ID=id19;Parent=rna18;anticodon=(pos:636466..636468);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Pro
NZ_CP011126.1	RefSeq	gene	636596	636669	.	+	.	ID=gene667;Name=CleRt_RS03120;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS03120;old_locus_tag=CleRT_t018
NZ_CP011126.1	tRNAscan-SE	tRNA	636596	636669	.	+	.	ID=rna19;Parent=gene667;anticodon=(pos:636630..636632);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	tRNAscan-SE	exon	636596	636669	.	+	.	ID=id20;Parent=rna19;anticodon=(pos:636630..636632);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	RefSeq	gene	636753	636830	.	+	.	ID=gene668;Name=CleRt_RS03125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS03125;old_locus_tag=CleRT_t019
NZ_CP011126.1	tRNAscan-SE	tRNA	636753	636830	.	+	.	ID=rna20;Parent=gene668;anticodon=(pos:636786..636788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-His
NZ_CP011126.1	tRNAscan-SE	exon	636753	636830	.	+	.	ID=id21;Parent=rna20;anticodon=(pos:636786..636788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-His
NZ_CP011126.1	RefSeq	gene	636877	638307	.	+	.	ID=gene669;Name=CleRt_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03130;old_locus_tag=CleRT_06010
NZ_CP011126.1	Protein Homology	CDS	636877	638307	.	+	0	ID=cds648;Parent=gene669;Dbxref=Genbank:WP_048875053.1;Name=WP_048875053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996682.1;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_048875053.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	638361	640286	.	-	.	ID=gene670;Name=CleRt_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03135;old_locus_tag=CleRT_06020
NZ_CP011126.1	Protein Homology	CDS	638361	640286	.	-	0	ID=cds649;Parent=gene670;Dbxref=Genbank:WP_048875054.1;Name=WP_048875054.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00534.18;product=hypothetical protein;protein_id=WP_048875054.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	640309	642087	.	-	.	ID=gene671;Name=CleRt_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03140;old_locus_tag=CleRT_06030
NZ_CP011126.1	Protein Homology	CDS	640309	642087	.	-	0	ID=cds650;Parent=gene671;Dbxref=Genbank:WP_082160410.1;Name=WP_082160410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01536;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_082160410.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	642239	642601	.	-	.	ID=gene672;Name=CleRt_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03145;old_locus_tag=CleRT_06040
NZ_CP011126.1	GeneMarkS+	CDS	642239	642601	.	-	0	ID=cds651;Parent=gene672;Dbxref=Genbank:WP_048875056.1;Name=WP_048875056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875056.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	642675	643175	.	-	.	ID=gene673;Name=CleRt_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03150;old_locus_tag=CleRT_06050
NZ_CP011126.1	GeneMarkS+	CDS	642675	643175	.	-	0	ID=cds652;Parent=gene673;Dbxref=Genbank:WP_048875057.1;Name=WP_048875057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875057.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	643433	643651	.	+	.	ID=gene674;Name=CleRt_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03155
NZ_CP011126.1	GeneMarkS+	CDS	643433	643651	.	+	0	ID=cds653;Parent=gene674;Dbxref=Genbank:WP_048875058.1;Name=WP_048875058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875058.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	644775	646808	.	-	.	ID=gene675;Name=CleRt_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03160;old_locus_tag=CleRT_06070
NZ_CP011126.1	GeneMarkS+	CDS	644775	646808	.	-	0	ID=cds654;Parent=gene675;Dbxref=Genbank:WP_048875059.1;Name=WP_048875059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875059.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	646833	647600	.	-	.	ID=gene676;Name=CleRt_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03165;old_locus_tag=CleRT_06080
NZ_CP011126.1	Protein Homology	CDS	646833	647600	.	-	0	ID=cds655;Parent=gene676;Dbxref=Genbank:WP_048875060.1;Name=WP_048875060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009458572.1;product=hypothetical protein;protein_id=WP_048875060.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	647619	648410	.	-	.	ID=gene677;Name=CleRt_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03170;old_locus_tag=CleRT_06090
NZ_CP011126.1	Protein Homology	CDS	647619	648410	.	-	0	ID=cds656;Parent=gene677;Dbxref=Genbank:WP_048875061.1;Name=WP_048875061.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01061.22;product=hypothetical protein;protein_id=WP_048875061.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	649835	650113	.	+	.	ID=gene678;Name=CleRt_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03175;old_locus_tag=CleRT_06110
NZ_CP011126.1	GeneMarkS+	CDS	649835	650113	.	+	0	ID=cds657;Parent=gene678;Dbxref=Genbank:WP_048875062.1;Name=WP_048875062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875062.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	650120	650659	.	-	.	ID=gene679;Name=CleRt_RS08900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08900;old_locus_tag=CleRT_06120;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	650120	650659	.	-	0	ID=cds658;Parent=gene679;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017018365.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	651347	651652	.	+	.	ID=gene680;Name=CleRt_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03185
NZ_CP011126.1	Protein Homology	CDS	651347	651652	.	+	0	ID=cds659;Parent=gene680;Dbxref=Genbank:WP_048875063.1;Name=WP_048875063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02679.13;product=hypothetical protein;protein_id=WP_048875063.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	651648	651866	.	+	.	ID=gene681;Name=CleRt_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08905
NZ_CP011126.1	Protein Homology	CDS	651648	651866	.	+	0	ID=cds660;Parent=gene681;Dbxref=Genbank:WP_082160411.1;Name=WP_082160411.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02679.13;product=hypothetical protein;protein_id=WP_082160411.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	651856	652644	.	+	.	ID=gene682;Name=CleRt_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03190
NZ_CP011126.1	GeneMarkS+	CDS	651856	652644	.	+	0	ID=cds661;Parent=gene682;Dbxref=Genbank:WP_048875064.1;Name=WP_048875064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875064.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	652993	653277	.	+	.	ID=gene683;Name=CleRt_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03195
NZ_CP011126.1	Protein Homology	CDS	652993	653277	.	+	0	ID=cds662;Parent=gene683;Dbxref=Genbank:WP_082160412.1;Name=WP_082160412.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14698.4;product=hypothetical protein;protein_id=WP_082160412.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	654622	654777	.	+	.	ID=gene684;Name=CleRt_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08910
NZ_CP011126.1	Protein Homology	CDS	654622	654777	.	+	0	ID=cds663;Parent=gene684;Dbxref=Genbank:WP_082160413.1;Name=WP_082160413.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00881.22;product=hypothetical protein;protein_id=WP_082160413.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	655129	655338	.	+	.	ID=gene685;Name=CleRt_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03200
NZ_CP011126.1	GeneMarkS+	CDS	655129	655338	.	+	0	ID=cds664;Parent=gene685;Dbxref=Genbank:WP_048875066.1;Name=WP_048875066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875066.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	656139	656336	.	-	.	ID=gene686;Name=CleRt_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03205
NZ_CP011126.1	GeneMarkS+	CDS	656139	656336	.	-	0	ID=cds665;Parent=gene686;Dbxref=Genbank:WP_048875067.1;Name=WP_048875067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875067.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	660092	660301	.	+	.	ID=gene687;Name=CleRt_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03210
NZ_CP011126.1	Protein Homology	CDS	660092	660301	.	+	0	ID=cds666;Parent=gene687;Dbxref=Genbank:WP_048875068.1;Name=WP_048875068.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03060.13;product=hypothetical protein;protein_id=WP_048875068.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	660442	660675	.	+	.	ID=gene688;Name=CleRt_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03215
NZ_CP011126.1	GeneMarkS+	CDS	660442	660675	.	+	0	ID=cds667;Parent=gene688;Dbxref=Genbank:WP_048875069.1;Name=WP_048875069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875069.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	660657	660917	.	+	.	ID=gene689;Name=CleRt_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03220
NZ_CP011126.1	Protein Homology	CDS	660657	660917	.	+	0	ID=cds668;Parent=gene689;Dbxref=Genbank:WP_082160414.1;Name=WP_082160414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03060.13;product=nitronate monooxygenase;protein_id=WP_082160414.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	661123	661523	.	-	.	ID=gene690;Name=CleRt_RS08915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08915;old_locus_tag=CleRT_06200;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	661123	661523	.	-	0	ID=cds669;Parent=gene690;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771201.1;product=glyoxalase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	662143	662478	.	+	.	ID=gene691;Name=CleRt_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03225;old_locus_tag=CleRT_06210
NZ_CP011126.1	GeneMarkS+	CDS	662143	662478	.	+	0	ID=cds670;Parent=gene691;Dbxref=Genbank:WP_048875071.1;Name=WP_048875071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875071.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	663097	663169	.	+	.	ID=gene692;Name=CleRt_RS03230;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS03230;old_locus_tag=CleRT_t020
NZ_CP011126.1	tRNAscan-SE	tRNA	663097	663169	.	+	.	ID=rna21;Parent=gene692;anticodon=(pos:663130..663132);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Lys
NZ_CP011126.1	tRNAscan-SE	exon	663097	663169	.	+	.	ID=id22;Parent=rna21;anticodon=(pos:663130..663132);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Lys
NZ_CP011126.1	RefSeq	gene	663243	663545	.	-	.	ID=gene693;Name=CleRt_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03235
NZ_CP011126.1	Protein Homology	CDS	663243	663545	.	-	0	ID=cds671;Parent=gene693;Dbxref=Genbank:WP_082160415.1;Name=WP_082160415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019349936.1;product=site-specific integrase;protein_id=WP_082160415.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	663532	663822	.	-	.	ID=gene694;Name=CleRt_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03240
NZ_CP011126.1	GeneMarkS+	CDS	663532	663822	.	-	0	ID=cds672;Parent=gene694;Dbxref=Genbank:WP_048875072.1;Name=WP_048875072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875072.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	663848	664120	.	-	.	ID=gene695;Name=CleRt_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03245
NZ_CP011126.1	GeneMarkS+	CDS	663848	664120	.	-	0	ID=cds673;Parent=gene695;Dbxref=Genbank:WP_048875073.1;Name=WP_048875073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875073.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	665703	665978	.	-	.	ID=gene696;Name=CleRt_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03250;old_locus_tag=CleRT_06240
NZ_CP011126.1	GeneMarkS+	CDS	665703	665978	.	-	0	ID=cds674;Parent=gene696;Dbxref=Genbank:WP_048875074.1;Name=WP_048875074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875074.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	665950	666354	.	-	.	ID=gene697;Name=CleRt_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03255;old_locus_tag=CleRT_06250
NZ_CP011126.1	Protein Homology	CDS	665950	666354	.	-	0	ID=cds675;Parent=gene697;Dbxref=Genbank:WP_048875075.1;Name=WP_048875075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220330.1;product=DUF3775 domain-containing protein;protein_id=WP_048875075.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	666625	667815	.	+	.	ID=gene698;Name=CleRt_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03260;old_locus_tag=CleRT_06260
NZ_CP011126.1	Protein Homology	CDS	666625	667815	.	+	0	ID=cds676;Parent=gene698;Dbxref=Genbank:WP_048875076.1;Name=WP_048875076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771800.1;product=type III PLP-dependent enzyme;protein_id=WP_048875076.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	667844	668893	.	+	.	ID=gene699;Name=CleRt_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03265;old_locus_tag=CleRT_06270
NZ_CP011126.1	Protein Homology	CDS	667844	668893	.	+	0	ID=cds677;Parent=gene699;Dbxref=Genbank:WP_048875077.1;Name=WP_048875077.1;Note=transforms a conserved lysine residue of initiation factor 5A into deoxyhypusine;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771799.1;product=deoxyhypusine synthase;protein_id=WP_048875077.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	668902	669783	.	+	.	ID=gene700;Name=CleRt_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03270;old_locus_tag=CleRT_06280
NZ_CP011126.1	Protein Homology	CDS	668902	669783	.	+	0	ID=cds678;Parent=gene700;Dbxref=Genbank:WP_048875078.1;Name=WP_048875078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006997704.1;product=agmatinase;protein_id=WP_048875078.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	670697	671080	.	-	.	ID=gene701;Name=CleRt_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03275
NZ_CP011126.1	GeneMarkS+	CDS	670697	671080	.	-	0	ID=cds679;Parent=gene701;Dbxref=Genbank:WP_048875079.1;Name=WP_048875079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875079.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	671280	671597	.	-	.	ID=gene702;Name=CleRt_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03280
NZ_CP011126.1	Protein Homology	CDS	671280	671597	.	-	0	ID=cds680;Parent=gene702;Dbxref=Genbank:WP_082160416.1;Name=WP_082160416.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02776.16;product=hypothetical protein;protein_id=WP_082160416.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	672092	672881	.	+	.	ID=gene703;Name=CleRt_RS08285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08285;old_locus_tag=CleRT_06310;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	672092	672881	.	+	0	ID=cds681;Parent=gene703;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996714.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	672881	673681	.	+	.	ID=gene704;Name=CleRt_RS03290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03290;old_locus_tag=CleRT_06320;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	672881	673681	.	+	0	ID=cds682;Parent=gene704;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771788.1;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	673693	674118	.	+	.	ID=gene705;Name=CleRt_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03295
NZ_CP011126.1	Protein Homology	CDS	673693	674118	.	+	0	ID=cds683;Parent=gene705;Dbxref=Genbank:WP_082160417.1;Name=WP_082160417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02470.18;product=MCE family protein;protein_id=WP_082160417.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	675211	675646	.	-	.	ID=gene706;Name=CleRt_RS08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08920;old_locus_tag=CleRT_06350;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	675211	675646	.	-	0	ID=cds684;Parent=gene706;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570847.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	675933	676151	.	+	.	ID=gene707;Name=CleRt_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08290
NZ_CP011126.1	GeneMarkS+	CDS	675933	676151	.	+	0	ID=cds685;Parent=gene707;Dbxref=Genbank:WP_053097844.1;Name=WP_053097844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097844.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	676352	676813	.	-	.	ID=gene708;Name=CleRt_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03305;old_locus_tag=CleRT_06370
NZ_CP011126.1	GeneMarkS+	CDS	676352	676813	.	-	0	ID=cds686;Parent=gene708;Dbxref=Genbank:WP_053097847.1;Name=WP_053097847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097847.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	677064	677149	.	+	.	ID=gene709;Name=CleRt_RS03310;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS03310;old_locus_tag=CleRT_t021
NZ_CP011126.1	tRNAscan-SE	tRNA	677064	677149	.	+	.	ID=rna22;Parent=gene709;anticodon=(pos:677098..677100);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	tRNAscan-SE	exon	677064	677149	.	+	.	ID=id23;Parent=rna22;anticodon=(pos:677098..677100);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	RefSeq	gene	677265	678581	.	+	.	ID=gene710;Name=CleRt_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03315;old_locus_tag=CleRT_06380
NZ_CP011126.1	Protein Homology	CDS	677265	678581	.	+	0	ID=cds687;Parent=gene710;Dbxref=Genbank:WP_048875082.1;Name=WP_048875082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772899.1;product=trigger factor;protein_id=WP_048875082.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	678584	679171	.	+	.	ID=gene711;Name=CleRt_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03320;old_locus_tag=CleRT_06390
NZ_CP011126.1	Protein Homology	CDS	678584	679171	.	+	0	ID=cds688;Parent=gene711;Dbxref=Genbank:WP_048875772.1;Name=WP_048875772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771772.1;product=ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP;protein_id=WP_048875772.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	679227	680489	.	+	.	ID=gene712;Name=CleRt_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03325;old_locus_tag=CleRT_06400
NZ_CP011126.1	Protein Homology	CDS	679227	680489	.	+	0	ID=cds689;Parent=gene712;Dbxref=Genbank:WP_048875083.1;Name=WP_048875083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017701334.1;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_048875083.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	680503	682956	.	+	.	ID=gene713;Name=CleRt_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03330;old_locus_tag=CleRT_06410
NZ_CP011126.1	Protein Homology	CDS	680503	682956	.	+	0	ID=cds690;Parent=gene713;Dbxref=Genbank:WP_048875084.1;Name=WP_048875084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957770.1;product=endopeptidase La;protein_id=WP_048875084.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	682972	684294	.	+	.	ID=gene714;Name=CleRt_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03335;old_locus_tag=CleRT_06420
NZ_CP011126.1	Protein Homology	CDS	682972	684294	.	+	0	ID=cds691;Parent=gene714;Dbxref=Genbank:WP_048875773.1;Name=WP_048875773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570184.1;product=metalloprotease PmbA;protein_id=WP_048875773.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	685066	685308	.	+	.	ID=gene715;Name=CleRt_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03340;old_locus_tag=CleRT_06440
NZ_CP011126.1	GeneMarkS+	CDS	685066	685308	.	+	0	ID=cds692;Parent=gene715;Dbxref=Genbank:WP_048875085.1;Name=WP_048875085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875085.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	686345	686614	.	-	.	ID=gene716;Name=CleRt_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03345;old_locus_tag=CleRT_06460
NZ_CP011126.1	Protein Homology	CDS	686345	686614	.	-	0	ID=cds693;Parent=gene716;Dbxref=Genbank:WP_048875086.1;Name=WP_048875086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007883792.1;product=HPr family phosphocarrier protein;protein_id=WP_048875086.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	686624	687157	.	-	.	ID=gene717;Name=CleRt_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03350;old_locus_tag=CleRT_06470
NZ_CP011126.1	Protein Homology	CDS	686624	687157	.	-	0	ID=cds694;Parent=gene717;Dbxref=Genbank:WP_048875774.1;Name=WP_048875774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771767.1;product=serine kinase;protein_id=WP_048875774.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	687181	687471	.	-	.	ID=gene718;Name=CleRt_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03355;old_locus_tag=CleRT_06480
NZ_CP011126.1	Protein Homology	CDS	687181	687471	.	-	0	ID=cds695;Parent=gene718;Dbxref=Genbank:WP_048875087.1;Name=WP_048875087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771766.1;product=ribosomal subunit interface protein;protein_id=WP_048875087.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	687538	688260	.	-	.	ID=gene719;Name=CleRt_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03360;old_locus_tag=CleRT_06490
NZ_CP011126.1	Protein Homology	CDS	687538	688260	.	-	0	ID=cds696;Parent=gene719;Dbxref=Genbank:WP_048875088.1;Name=WP_048875088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091254.1;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_048875088.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	688266	688719	.	-	.	ID=gene720;Name=CleRt_RS03365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03365;old_locus_tag=CleRT_06500;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	688266	688719	.	-	0	ID=cds697;Parent=gene720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957774.1;product=lipopolysaccharide transport periplasmic protein LptA;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	688768	689352	.	-	.	ID=gene721;Name=CleRt_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03370;old_locus_tag=CleRT_06510
NZ_CP011126.1	Protein Homology	CDS	688768	689352	.	-	0	ID=cds698;Parent=gene721;Dbxref=Genbank:WP_048875089.1;Name=WP_048875089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772879.1;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_048875089.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	689349	689846	.	-	.	ID=gene722;Name=CleRt_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03375;old_locus_tag=CleRT_06520
NZ_CP011126.1	Protein Homology	CDS	689349	689846	.	-	0	ID=cds699;Parent=gene722;Dbxref=Genbank:WP_048875090.1;Name=WP_048875090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004372086.1;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=WP_048875090.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	689852	690826	.	-	.	ID=gene723;Name=CleRt_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03380;old_locus_tag=CleRT_06530
NZ_CP011126.1	Protein Homology	CDS	689852	690826	.	-	0	ID=cds700;Parent=gene723;Dbxref=Genbank:WP_048875091.1;Name=WP_048875091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771757.1;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_048875091.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	690900	691688	.	+	.	ID=gene724;Name=CleRt_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03385;old_locus_tag=CleRT_06540
NZ_CP011126.1	Protein Homology	CDS	690900	691688	.	+	0	ID=cds701;Parent=gene724;Dbxref=Genbank:WP_048875092.1;Name=WP_048875092.1;Note=ABC transporter maintaining outer membrane lipid asymmetry;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003094343.1;product=ABC transporter ATP-binding protein;protein_id=WP_048875092.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	691685	692467	.	+	.	ID=gene725;Name=CleRt_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03390;old_locus_tag=CleRT_06550
NZ_CP011126.1	Protein Homology	CDS	691685	692467	.	+	0	ID=cds702;Parent=gene725;Dbxref=Genbank:WP_048875093.1;Name=WP_048875093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010946578.1;product=ABC transporter permease;protein_id=WP_048875093.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	692493	692924	.	+	.	ID=gene726;Name=CleRt_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03395;old_locus_tag=CleRT_06560
NZ_CP011126.1	Protein Homology	CDS	692493	692924	.	+	0	ID=cds703;Parent=gene726;Dbxref=Genbank:WP_048875775.1;Name=WP_048875775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010597852.1;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_048875775.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	692962	693615	.	+	.	ID=gene727;Name=CleRt_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03400;old_locus_tag=CleRT_06570
NZ_CP011126.1	Protein Homology	CDS	692962	693615	.	+	0	ID=cds704;Parent=gene727;Dbxref=Genbank:WP_048875094.1;Name=WP_048875094.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05494.10;product=hypothetical protein;protein_id=WP_048875094.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	693615	693890	.	+	.	ID=gene728;Name=CleRt_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03405;old_locus_tag=CleRT_06580
NZ_CP011126.1	Protein Homology	CDS	693615	693890	.	+	0	ID=cds705;Parent=gene728;Dbxref=Genbank:WP_048875095.1;Name=WP_048875095.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01740.19;product=anti-sigma factor antagonist;protein_id=WP_048875095.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	693897	695201	.	+	.	ID=gene729;Name=CleRt_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03410;old_locus_tag=CleRT_06590
NZ_CP011126.1	Protein Homology	CDS	693897	695201	.	+	0	ID=cds706;Parent=gene729;Dbxref=Genbank:WP_048875096.1;Name=WP_048875096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771755.1;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_048875096.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	695208	696092	.	-	.	ID=gene730;Name=CleRt_RS08925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08925;old_locus_tag=CleRT_06600;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	695208	696092	.	-	0	ID=cds707;Parent=gene730;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771678.1;product=quinol oxidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	696349	697769	.	-	.	ID=gene731;Name=CleRt_RS08930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08930;old_locus_tag=CleRT_06610;partial=true;pseudo=true;start_range=.,696349
NZ_CP011126.1	Protein Homology	CDS	696349	697769	.	-	0	ID=cds708;Parent=gene731;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769021.1;partial=true;product=multidrug transporter AcrB;pseudo=true;start_range=.,696349;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	697868	698818	.	-	.	ID=gene732;Name=CleRt_RS03420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03420;old_locus_tag=CleRT_06620;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	697868	698818	.	-	0	ID=cds709;Parent=gene732;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957780.1;product=efflux transporter periplasmic adaptor subunit;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	698828	700180	.	-	.	ID=gene733;Name=CleRt_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03425;old_locus_tag=CleRT_06630
NZ_CP011126.1	Protein Homology	CDS	698828	700180	.	-	0	ID=cds710;Parent=gene733;Dbxref=Genbank:WP_048875097.1;Name=WP_048875097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570176.1;product=endopeptidase;protein_id=WP_048875097.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	700239	700963	.	-	.	ID=gene734;Name=CleRt_RS03430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03430;old_locus_tag=CleRT_06640;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	700239	700963	.	-	0	ID=cds711;Parent=gene734;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018054066.1;product=polyphenol oxidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	700947	701912	.	-	.	ID=gene735;Name=CleRt_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03435;old_locus_tag=CleRT_06650
NZ_CP011126.1	Protein Homology	CDS	700947	701912	.	-	0	ID=cds712;Parent=gene735;Dbxref=Genbank:WP_048875098.1;Name=WP_048875098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220490.1;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_048875098.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	702073	702843	.	+	.	ID=gene736;Name=CleRt_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03440;old_locus_tag=CleRT_06660
NZ_CP011126.1	Protein Homology	CDS	702073	702843	.	+	0	ID=cds713;Parent=gene736;Dbxref=Genbank:WP_048875099.1;Name=WP_048875099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769012.1;product=outer membrane protein assembly factor BamD;protein_id=WP_048875099.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	702857	703261	.	-	.	ID=gene737;Name=CleRt_RS03445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03445;old_locus_tag=CleRT_06670;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	702857	703261	.	-	0	ID=cds714;Parent=gene737;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769009.1;product=two-component system response regulator;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	703646	704265	.	+	.	ID=gene738;Name=CleRt_RS08935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08935;old_locus_tag=CleRT_06690;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	703646	704265	.	+	0	ID=cds715;Parent=gene738;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957786.1;product=transcriptional regulator;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	704310	704909	.	+	.	ID=gene739;Name=CleRt_RS03450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03450;old_locus_tag=CleRT_06700;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	704310	704909	.	+	0	ID=cds716;Parent=gene739;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220486.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	705483	705680	.	+	.	ID=gene740;Name=CleRt_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08940
NZ_CP011126.1	Protein Homology	CDS	705483	705680	.	+	0	ID=cds717;Parent=gene740;Dbxref=Genbank:WP_082160418.1;Name=WP_082160418.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02771.14;product=hypothetical protein;protein_id=WP_082160418.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	706068	706247	.	+	.	ID=gene741;Name=CleRt_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03460
NZ_CP011126.1	GeneMarkS+	CDS	706068	706247	.	+	0	ID=cds718;Parent=gene741;Dbxref=Genbank:WP_048875101.1;Name=WP_048875101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875101.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	706528	706707	.	+	.	ID=gene742;Name=CleRt_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08945
NZ_CP011126.1	Protein Homology	CDS	706528	706707	.	+	0	ID=cds719;Parent=gene742;Dbxref=Genbank:WP_082160419.1;Name=WP_082160419.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09317.9;product=DUF1974 domain-containing protein;protein_id=WP_082160419.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	706661	707035	.	+	.	ID=gene743;Name=CleRt_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03465
NZ_CP011126.1	Protein Homology	CDS	706661	707035	.	+	0	ID=cds720;Parent=gene743;Dbxref=Genbank:WP_048875102.1;Name=WP_048875102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09317.9;product=DUF1974 domain-containing protein;protein_id=WP_048875102.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	707508	707831	.	+	.	ID=gene744;Name=CleRt_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03470
NZ_CP011126.1	GeneMarkS+	CDS	707508	707831	.	+	0	ID=cds721;Parent=gene744;Dbxref=Genbank:WP_048875103.1;Name=WP_048875103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875103.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	708598	708840	.	+	.	ID=gene745;Name=CleRt_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03475
NZ_CP011126.1	Protein Homology	CDS	708598	708840	.	+	0	ID=cds722;Parent=gene745;Dbxref=Genbank:WP_048875104.1;Name=WP_048875104.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13193.4;product=hypothetical protein;protein_id=WP_048875104.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	708912	709097	.	-	.	ID=gene746;Name=CleRt_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08305
NZ_CP011126.1	GeneMarkS+	CDS	708912	709097	.	-	0	ID=cds723;Parent=gene746;Dbxref=Genbank:WP_053097852.1;Name=WP_053097852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097852.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	709886	710149	.	-	.	ID=gene747;Name=CleRt_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08310
NZ_CP011126.1	GeneMarkS+	CDS	709886	710149	.	-	0	ID=cds724;Parent=gene747;Dbxref=Genbank:WP_053097854.1;Name=WP_053097854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097854.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	710689	710763	.	+	.	ID=gene748;Name=CleRt_RS03485;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS03485;old_locus_tag=CleRT_t022
NZ_CP011126.1	tRNAscan-SE	tRNA	710689	710763	.	+	.	ID=rna23;Parent=gene748;anticodon=(pos:710721..710723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Val
NZ_CP011126.1	tRNAscan-SE	exon	710689	710763	.	+	.	ID=id24;Parent=rna23;anticodon=(pos:710721..710723);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Val
NZ_CP011126.1	RefSeq	gene	711023	711457	.	-	.	ID=gene749;Name=CleRt_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03490;old_locus_tag=CleRT_06740
NZ_CP011126.1	GeneMarkS+	CDS	711023	711457	.	-	0	ID=cds725;Parent=gene749;Dbxref=Genbank:WP_048875105.1;Name=WP_048875105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875105.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	711833	712057	.	+	.	ID=gene750;Name=CleRt_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03495
NZ_CP011126.1	GeneMarkS+	CDS	711833	712057	.	+	0	ID=cds726;Parent=gene750;Dbxref=Genbank:WP_048875106.1;Name=WP_048875106.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875106.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	712786	713037	.	+	.	ID=gene751;Name=CleRt_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03500
NZ_CP011126.1	GeneMarkS+	CDS	712786	713037	.	+	0	ID=cds727;Parent=gene751;Dbxref=Genbank:WP_048875107.1;Name=WP_048875107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875107.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	713034	713900	.	-	.	ID=gene752;Name=CleRt_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03505;old_locus_tag=CleRT_06760
NZ_CP011126.1	Protein Homology	CDS	713034	713900	.	-	0	ID=cds728;Parent=gene752;Dbxref=Genbank:WP_048875108.1;Name=WP_048875108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253433.1;product=aminodeoxychorismate lyase;protein_id=WP_048875108.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	713872	714465	.	-	.	ID=gene753;Name=CleRt_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03510;old_locus_tag=CleRT_06770
NZ_CP011126.1	Protein Homology	CDS	713872	714465	.	-	0	ID=cds729;Parent=gene753;Dbxref=Genbank:WP_048875109.1;Name=WP_048875109.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010279319.1;product=type 1 glutamine amidotransferase;protein_id=WP_048875109.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	714572	715984	.	+	.	ID=gene754;Name=CleRt_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03515;old_locus_tag=CleRT_06780
NZ_CP011126.1	Protein Homology	CDS	714572	715984	.	+	0	ID=cds730;Parent=gene754;Dbxref=Genbank:WP_048875110.1;Name=WP_048875110.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00553;product=aminodeoxychorismate synthase%2C component I;protein_id=WP_048875110.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	716162	716401	.	+	.	ID=gene755;Name=CleRt_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03520;old_locus_tag=CleRT_06790
NZ_CP011126.1	GeneMarkS+	CDS	716162	716401	.	+	0	ID=cds731;Parent=gene755;Dbxref=Genbank:WP_048875111.1;Name=WP_048875111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875111.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	716943	717305	.	-	.	ID=gene756;Name=CleRt_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03525;old_locus_tag=CleRT_06810
NZ_CP011126.1	GeneMarkS+	CDS	716943	717305	.	-	0	ID=cds732;Parent=gene756;Dbxref=Genbank:WP_048875112.1;Name=WP_048875112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875112.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	717366	717653	.	-	.	ID=gene757;Name=CleRt_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03530;old_locus_tag=CleRT_06820
NZ_CP011126.1	GeneMarkS+	CDS	717366	717653	.	-	0	ID=cds733;Parent=gene757;Dbxref=Genbank:WP_048875113.1;Name=WP_048875113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875113.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	718257	718487	.	-	.	ID=gene758;Name=CleRt_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03535;old_locus_tag=CleRT_06830
NZ_CP011126.1	GeneMarkS+	CDS	718257	718487	.	-	0	ID=cds734;Parent=gene758;Dbxref=Genbank:WP_048875114.1;Name=WP_048875114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875114.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	718926	720869	.	+	.	ID=gene759;Name=CleRt_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03540;old_locus_tag=CleRT_06840
NZ_CP011126.1	Protein Homology	CDS	718926	720869	.	+	0	ID=cds735;Parent=gene759;Dbxref=Genbank:WP_048875115.1;Name=WP_048875115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_040948163.1;product=threonine--tRNA ligase;protein_id=WP_048875115.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	720881	721438	.	+	.	ID=gene760;Name=CleRt_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03545;old_locus_tag=CleRT_06850
NZ_CP011126.1	Protein Homology	CDS	720881	721438	.	+	0	ID=cds736;Parent=gene760;Dbxref=Genbank:WP_048875116.1;Name=WP_048875116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013647985.1;product=translation initiation factor IF-3;protein_id=WP_048875116.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	721419	721613	.	+	.	ID=gene761;Name=CleRt_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03550;old_locus_tag=CleRT_06860
NZ_CP011126.1	Protein Homology	CDS	721419	721613	.	+	0	ID=cds737;Parent=gene761;Dbxref=Genbank:WP_048875117.1;Name=WP_048875117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220603.1;product=50S ribosomal protein L35;protein_id=WP_048875117.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	721649	722008	.	+	.	ID=gene762;Name=CleRt_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03555;old_locus_tag=CleRT_06870
NZ_CP011126.1	Protein Homology	CDS	721649	722008	.	+	0	ID=cds738;Parent=gene762;Dbxref=Genbank:WP_048875118.1;Name=WP_048875118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011759881.1;product=50S ribosomal protein L20;protein_id=WP_048875118.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	722022	723008	.	+	.	ID=gene763;Name=CleRt_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03560;old_locus_tag=CleRT_06880
NZ_CP011126.1	Protein Homology	CDS	722022	723008	.	+	0	ID=cds739;Parent=gene763;Dbxref=Genbank:WP_048875776.1;Name=WP_048875776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569882.1;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_048875776.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	723012	725393	.	+	.	ID=gene764;Name=CleRt_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03565;old_locus_tag=CleRT_06890
NZ_CP011126.1	Protein Homology	CDS	723012	725393	.	+	0	ID=cds740;Parent=gene764;Dbxref=Genbank:WP_048875119.1;Name=WP_048875119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770929.1;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_048875119.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	725397	725705	.	+	.	ID=gene765;Name=CleRt_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03570;old_locus_tag=CleRT_06900
NZ_CP011126.1	Protein Homology	CDS	725397	725705	.	+	0	ID=cds741;Parent=gene765;Dbxref=Genbank:WP_048875120.1;Name=WP_048875120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770927.1;product=integration host factor subunit alpha;protein_id=WP_048875120.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	725677	726054	.	+	.	ID=gene766;Name=CleRt_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03575;old_locus_tag=CleRT_06910
NZ_CP011126.1	Protein Homology	CDS	725677	726054	.	+	0	ID=cds742;Parent=gene766;Dbxref=Genbank:WP_048875121.1;Name=WP_048875121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770926.1;product=MerR family transcriptional regulator;protein_id=WP_048875121.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	726442	726515	.	+	.	ID=gene767;Name=CleRt_RS03580;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS03580;old_locus_tag=CleRT_t023
NZ_CP011126.1	tRNAscan-SE	tRNA	726442	726515	.	+	.	ID=rna24;Parent=gene767;anticodon=(pos:726476..726478);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Pro
NZ_CP011126.1	tRNAscan-SE	exon	726442	726515	.	+	.	ID=id25;Parent=rna24;anticodon=(pos:726476..726478);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Pro
NZ_CP011126.1	RefSeq	gene	726804	727028	.	+	.	ID=gene768;Name=CleRt_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03585
NZ_CP011126.1	GeneMarkS+	CDS	726804	727028	.	+	0	ID=cds743;Parent=gene768;Dbxref=Genbank:WP_048875122.1;Name=WP_048875122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875122.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	727328	727528	.	+	.	ID=gene769;Name=CleRt_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03590;old_locus_tag=CleRT_06940
NZ_CP011126.1	Protein Homology	CDS	727328	727528	.	+	0	ID=cds744;Parent=gene769;Dbxref=Genbank:WP_082160420.1;Name=WP_082160420.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01439;product=hypothetical protein;protein_id=WP_082160420.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	727632	727907	.	+	.	ID=gene770;Name=CleRt_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03595;old_locus_tag=CleRT_06950
NZ_CP011126.1	GeneMarkS+	CDS	727632	727907	.	+	0	ID=cds745;Parent=gene770;Dbxref=Genbank:WP_048875124.1;Name=WP_048875124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875124.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	728214	728435	.	+	.	ID=gene771;Name=CleRt_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03600;old_locus_tag=CleRT_06960
NZ_CP011126.1	GeneMarkS+	CDS	728214	728435	.	+	0	ID=cds746;Parent=gene771;Dbxref=Genbank:WP_048875125.1;Name=WP_048875125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875125.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	729503	729754	.	+	.	ID=gene772;Name=CleRt_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03605;old_locus_tag=CleRT_06970
NZ_CP011126.1	GeneMarkS+	CDS	729503	729754	.	+	0	ID=cds747;Parent=gene772;Dbxref=Genbank:WP_048875126.1;Name=WP_048875126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875126.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	730904	731125	.	-	.	ID=gene773;Name=CleRt_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03610
NZ_CP011126.1	GeneMarkS+	CDS	730904	731125	.	-	0	ID=cds748;Parent=gene773;Dbxref=Genbank:WP_048875127.1;Name=WP_048875127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875127.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	732789	733376	.	-	.	ID=gene774;Name=CleRt_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03615
NZ_CP011126.1	GeneMarkS+	CDS	732789	733376	.	-	0	ID=cds749;Parent=gene774;Dbxref=Genbank:WP_048875128.1;Name=WP_048875128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875128.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	733446	733748	.	+	.	ID=gene775;Name=CleRt_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03620
NZ_CP011126.1	GeneMarkS+	CDS	733446	733748	.	+	0	ID=cds750;Parent=gene775;Dbxref=Genbank:WP_048875129.1;Name=WP_048875129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875129.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	734126	734311	.	+	.	ID=gene776;Name=CleRt_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03625
NZ_CP011126.1	GeneMarkS+	CDS	734126	734311	.	+	0	ID=cds751;Parent=gene776;Dbxref=Genbank:WP_048875130.1;Name=WP_048875130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875130.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	734657	735016	.	+	.	ID=gene777;Name=CleRt_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03630
NZ_CP011126.1	Protein Homology	CDS	734657	735016	.	+	0	ID=cds752;Parent=gene777;Dbxref=Genbank:WP_082160421.1;Name=WP_082160421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01244.19;product=hypothetical protein;protein_id=WP_082160421.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	735739	735855	.	-	.	ID=gene778;Name=CleRt_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08950
NZ_CP011126.1	Protein Homology	CDS	735739	735855	.	-	0	ID=cds753;Parent=gene778;Dbxref=Genbank:WP_082160422.1;Name=WP_082160422.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00196.17;product=hypothetical protein;protein_id=WP_082160422.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	737015	737231	.	-	.	ID=gene779;Name=CleRt_RS08955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08955;old_locus_tag=CleRT_07030;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	737015	737231	.	-	0	ID=cds754;Parent=gene779;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011947063.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	737407	737580	.	+	.	ID=gene780;Name=CleRt_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08960;old_locus_tag=CleRT_07040
NZ_CP011126.1	Protein Homology	CDS	737407	737580	.	+	0	ID=cds755;Parent=gene780;Dbxref=Genbank:WP_082160423.1;Name=WP_082160423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997173.1;product=hypothetical protein;protein_id=WP_082160423.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	737582	738334	.	+	.	ID=gene781;Name=CleRt_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03635;old_locus_tag=CleRT_07050
NZ_CP011126.1	Protein Homology	CDS	737582	738334	.	+	0	ID=cds756;Parent=gene781;Dbxref=Genbank:WP_048875132.1;Name=WP_048875132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772753.1;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_048875132.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	738680	738922	.	+	.	ID=gene782;Name=CleRt_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08315
NZ_CP011126.1	GeneMarkS+	CDS	738680	738922	.	+	0	ID=cds757;Parent=gene782;Dbxref=Genbank:WP_053097856.1;Name=WP_053097856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097856.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	739063	739611	.	-	.	ID=gene783;Name=CleRt_RS03645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03645;old_locus_tag=CleRT_07070;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	739063	739611	.	-	0	ID=cds758;Parent=gene783;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771664.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	739899	740123	.	-	.	ID=gene784;Name=CleRt_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03650
NZ_CP011126.1	GeneMarkS+	CDS	739899	740123	.	-	0	ID=cds759;Parent=gene784;Dbxref=Genbank:WP_048875134.1;Name=WP_048875134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875134.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	740786	740998	.	-	.	ID=gene785;Name=CleRt_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08965
NZ_CP011126.1	Protein Homology	CDS	740786	740998	.	-	0	ID=cds760;Parent=gene785;Dbxref=Genbank:WP_082160407.1;Name=WP_082160407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00069.23;product=hypothetical protein;protein_id=WP_082160407.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	741750	743922	.	-	.	ID=gene786;Name=CleRt_RS03665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03665;old_locus_tag=CleRT_07090;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	741750	743922	.	-	0	ID=cds761;Parent=gene786;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220234.1;product=ribonuclease E;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	744318	745238	.	+	.	ID=gene787;Name=CleRt_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03670;old_locus_tag=CleRT_07100
NZ_CP011126.1	Protein Homology	CDS	744318	745238	.	+	0	ID=cds762;Parent=gene787;Dbxref=Genbank:WP_048875136.1;Name=WP_048875136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253138.1;product=RluA family pseudouridine synthase;protein_id=WP_048875136.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	745339	746018	.	+	.	ID=gene788;Name=CleRt_RS08970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08970;old_locus_tag=CleRT_07110;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	745339	746018	.	+	0	ID=cds763;Parent=gene788;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772758.1;product=serine/threonine protein phosphatase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	746095	747163	.	-	.	ID=gene789;Name=CleRt_RS03675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03675;old_locus_tag=CleRT_07120;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	746095	747163	.	-	0	ID=cds764;Parent=gene789;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957610.1;product=phospholipase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	747200	748936	.	-	.	ID=gene790;Name=CleRt_RS03680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03680;old_locus_tag=CleRT_07130;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	747200	748936	.	-	0	ID=cds765;Parent=gene790;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771288.1;product=DNA polymerase III;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	749196	749375	.	+	.	ID=gene791;Name=CleRt_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03685
NZ_CP011126.1	GeneMarkS+	CDS	749196	749375	.	+	0	ID=cds766;Parent=gene791;Dbxref=Genbank:WP_048875137.1;Name=WP_048875137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875137.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	749527	749721	.	+	.	ID=gene792;Name=CleRt_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03690;old_locus_tag=CleRT_07140
NZ_CP011126.1	Protein Homology	CDS	749527	749721	.	+	0	ID=cds767;Parent=gene792;Dbxref=Genbank:WP_048875778.1;Name=WP_048875778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771287.1;product=50S ribosomal protein L32;protein_id=WP_048875778.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	749728	750753	.	+	.	ID=gene793;Name=CleRt_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03695;old_locus_tag=CleRT_07150
NZ_CP011126.1	Protein Homology	CDS	749728	750753	.	+	0	ID=cds768;Parent=gene793;Dbxref=Genbank:WP_048875138.1;Name=WP_048875138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570298.1;product=phosphate acyltransferase PlsX;protein_id=WP_048875138.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	750753	751715	.	+	.	ID=gene794;Name=CleRt_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03700;old_locus_tag=CleRT_07160
NZ_CP011126.1	Protein Homology	CDS	750753	751715	.	+	0	ID=cds769;Parent=gene794;Dbxref=Genbank:WP_048875139.1;Name=WP_048875139.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018509432.1;product=ketoacyl-ACP synthase III;protein_id=WP_048875139.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	751734	752672	.	+	.	ID=gene795;Name=CleRt_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03705;old_locus_tag=CleRT_07170
NZ_CP011126.1	Protein Homology	CDS	751734	752672	.	+	0	ID=cds770;Parent=gene795;Dbxref=Genbank:WP_048875140.1;Name=WP_048875140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771270.1;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=WP_048875140.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	752710	753453	.	+	.	ID=gene796;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=CleRt_RS03710;old_locus_tag=CleRT_07180
NZ_CP011126.1	Protein Homology	CDS	752710	753453	.	+	0	ID=cds771;Parent=gene796;Dbxref=Genbank:WP_048875141.1;Name=WP_048875141.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012769347.1;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_048875141.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	753530	753781	.	+	.	ID=gene797;Name=CleRt_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03715;old_locus_tag=CleRT_07190
NZ_CP011126.1	Protein Homology	CDS	753530	753781	.	+	0	ID=cds772;Parent=gene797;Dbxref=Genbank:WP_048875142.1;Name=WP_048875142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771263.1;product=acyl carrier protein;protein_id=WP_048875142.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	753836	755074	.	+	.	ID=gene798;Name=CleRt_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03720;old_locus_tag=CleRT_07200
NZ_CP011126.1	Protein Homology	CDS	753836	755074	.	+	0	ID=cds773;Parent=gene798;Dbxref=Genbank:WP_048875143.1;Name=WP_048875143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771261.1;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=WP_048875143.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	755080	756216	.	+	.	ID=gene799;Name=CleRt_RS03725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03725;old_locus_tag=CleRT_07210;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	755080	756216	.	+	0	ID=cds774;Parent=gene799;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570296.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	756165	756812	.	+	.	ID=gene800;Name=CleRt_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03730;old_locus_tag=CleRT_07220
NZ_CP011126.1	Protein Homology	CDS	756165	756812	.	+	0	ID=cds775;Parent=gene800;Dbxref=Genbank:WP_048875144.1;Name=WP_048875144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997163.1;product=dTMP kinase;protein_id=WP_048875144.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	756833	757807	.	+	.	ID=gene801;Name=CleRt_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03735;old_locus_tag=CleRT_07230
NZ_CP011126.1	Protein Homology	CDS	756833	757807	.	+	0	ID=cds776;Parent=gene801;Dbxref=Genbank:WP_048875145.1;Name=WP_048875145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772605.1;product=DNA polymerase III subunit delta';protein_id=WP_048875145.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	757801	758574	.	+	.	ID=gene802;Name=CleRt_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03740;old_locus_tag=CleRT_07240
NZ_CP011126.1	Protein Homology	CDS	757801	758574	.	+	0	ID=cds777;Parent=gene802;Dbxref=Genbank:WP_048875146.1;Name=WP_048875146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002683059.1;product=TatD family deoxyribonuclease;protein_id=WP_048875146.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	758699	759786	.	-	.	ID=gene803;Name=CleRt_RS03745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03745;old_locus_tag=CleRT_07250;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	758699	759786	.	-	0	ID=cds778;Parent=gene803;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771244.1;product=glutamine synthetase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	759808	761247	.	-	.	ID=gene804;Name=CleRt_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03750;old_locus_tag=CleRT_07260
NZ_CP011126.1	Protein Homology	CDS	759808	761247	.	-	0	ID=cds779;Parent=gene804;Dbxref=Genbank:WP_048875147.1;Name=WP_048875147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957619.1;product=MFS transporter;protein_id=WP_048875147.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	761377	761916	.	-	.	ID=gene805;Name=CleRt_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03755;old_locus_tag=CleRT_07270
NZ_CP011126.1	Protein Homology	CDS	761377	761916	.	-	0	ID=cds780;Parent=gene805;Dbxref=Genbank:WP_048875148.1;Name=WP_048875148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772606.1;product=N-acetyltransferase;protein_id=WP_048875148.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	762336	764069	.	+	.	ID=gene806;Name=CleRt_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03760;old_locus_tag=CleRT_07280
NZ_CP011126.1	Protein Homology	CDS	762336	764069	.	+	0	ID=cds781;Parent=gene806;Dbxref=Genbank:WP_082160424.1;Name=WP_082160424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220239.1;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_082160424.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	764169	764464	.	+	.	ID=gene807;Name=CleRt_RS03765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03765;old_locus_tag=CleRT_07290;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	764169	764464	.	+	0	ID=cds782;Parent=gene807;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013943359.1;product=Trp operon repressor;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	764467	764721	.	+	.	ID=gene808;Name=CleRt_RS03770;end_range=764721,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03770;old_locus_tag=CleRT_07300;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	764467	764721	.	+	0	ID=cds783;Parent=gene808;Note=incomplete%3B partial in the middle of a contig%3B missing stop;end_range=764721,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997157.1;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	764840	766143	.	-	.	ID=gene809;Name=CleRt_RS03775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03775;old_locus_tag=CleRT_07310;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	764840	766143	.	-	0	ID=cds784;Parent=gene809;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997156.1;product=MFS transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	766160	767149	.	-	.	ID=gene810;Name=CleRt_RS03780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03780;old_locus_tag=CleRT_07320;partial=true;pseudo=true;start_range=.,766160
NZ_CP011126.1	Protein Homology	CDS	766160	767149	.	-	0	ID=cds785;Parent=gene810;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570290.1;partial=true;product=peptidase M14;pseudo=true;start_range=.,766160;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	767387	768578	.	+	.	ID=gene811;Name=CleRt_RS03785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03785;old_locus_tag=CleRT_07330;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	767387	768578	.	+	0	ID=cds786;Parent=gene811;Note=catalyzes the formation of fructose-6-phosphate from fructose-1%2C6-bisphosphate%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957626.1;product=fructose 1%2C6-bisphosphatase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	769216	769558	.	+	.	ID=gene812;Name=CleRt_RS08975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08975;old_locus_tag=CleRT_07350;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	769216	769558	.	+	0	ID=cds787;Parent=gene812;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019748818.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	769652	769937	.	-	.	ID=gene813;Name=CleRt_RS08980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08980;old_locus_tag=CleRT_07360;partial=true;pseudo=true;start_range=.,769652
NZ_CP011126.1	Protein Homology	CDS	769652	769937	.	-	0	ID=cds788;Parent=gene813;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997322.1;partial=true;product=hypothetical protein;pseudo=true;start_range=.,769652;transl_table=11
NZ_CP011126.1	RefSeq	gene	771003	771209	.	-	.	ID=gene814;Name=CleRt_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03795
NZ_CP011126.1	Protein Homology	CDS	771003	771209	.	-	0	ID=cds789;Parent=gene814;Dbxref=Genbank:WP_048875150.1;Name=WP_048875150.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13419.4;product=hypothetical protein;protein_id=WP_048875150.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	772648	772923	.	+	.	ID=gene815;Name=CleRt_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03800
NZ_CP011126.1	Protein Homology	CDS	772648	772923	.	+	0	ID=cds790;Parent=gene815;Dbxref=Genbank:WP_048875151.1;Name=WP_048875151.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00614.20;product=hypothetical protein;protein_id=WP_048875151.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	773834	773909	.	-	.	ID=gene816;Name=CleRt_RS03805;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS03805;old_locus_tag=CleRT_t024
NZ_CP011126.1	tRNAscan-SE	tRNA	773834	773909	.	-	.	ID=rna25;Parent=gene816;anticodon=(pos:complement(773874..773876));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Asn
NZ_CP011126.1	tRNAscan-SE	exon	773834	773909	.	-	.	ID=id26;Parent=rna25;anticodon=(pos:complement(773874..773876));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Asn
NZ_CP011126.1	RefSeq	gene	774032	775216	.	-	.	ID=gene817;Name=CleRt_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03810;old_locus_tag=CleRT_07390
NZ_CP011126.1	Protein Homology	CDS	774032	775216	.	-	0	ID=cds791;Parent=gene817;Dbxref=Genbank:WP_048875152.1;Name=WP_048875152.1;Note=catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220244.1;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_048875152.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	775323	777359	.	+	.	ID=gene818;Name=CleRt_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03815;old_locus_tag=CleRT_07400
NZ_CP011126.1	Protein Homology	CDS	775323	777359	.	+	0	ID=cds792;Parent=gene818;Dbxref=Genbank:WP_048875153.1;Name=WP_048875153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772603.1;product=excinuclease ABC subunit UvrB;protein_id=WP_048875153.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	777355	777979	.	+	.	ID=gene819;Name=CleRt_RS08985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08985;old_locus_tag=CleRT_07410;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	777355	777979	.	+	0	ID=cds793;Parent=gene819;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957632.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	778046	778963	.	-	.	ID=gene820;Name=CleRt_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03820;old_locus_tag=CleRT_07420
NZ_CP011126.1	Protein Homology	CDS	778046	778963	.	-	0	ID=cds794;Parent=gene820;Dbxref=Genbank:WP_048875154.1;Name=WP_048875154.1;Note=catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997140.1;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_048875154.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	778963	780312	.	-	.	ID=gene821;Name=CleRt_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03825;old_locus_tag=CleRT_07430
NZ_CP011126.1	Protein Homology	CDS	778963	780312	.	-	0	ID=cds795;Parent=gene821;Dbxref=Genbank:WP_048875155.1;Name=WP_048875155.1;Note=Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771177.1;product=N-ethylammeline chlorohydrolase;protein_id=WP_048875155.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	780503	783046	.	+	.	ID=gene822;Name=CleRt_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03830;old_locus_tag=CleRT_07440
NZ_CP011126.1	Protein Homology	CDS	780503	783046	.	+	0	ID=cds796;Parent=gene822;Dbxref=Genbank:WP_048875156.1;Name=WP_048875156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011946431.1;product=DNA gyrase subunit A;protein_id=WP_048875156.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	783077	784159	.	+	.	ID=gene823;Name=CleRt_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03835;old_locus_tag=CleRT_07450
NZ_CP011126.1	Protein Homology	CDS	783077	784159	.	+	0	ID=cds797;Parent=gene823;Dbxref=Genbank:WP_048875157.1;Name=WP_048875157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957636.1;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_048875157.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	784164	785462	.	+	.	ID=gene824;Name=CleRt_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03840;old_locus_tag=CleRT_07460
NZ_CP011126.1	Protein Homology	CDS	784164	785462	.	+	0	ID=cds798;Parent=gene824;Dbxref=Genbank:WP_048875158.1;Name=WP_048875158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871806.1;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_048875158.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	785504	786199	.	+	.	ID=gene825;Name=CleRt_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03845;old_locus_tag=CleRT_07470
NZ_CP011126.1	Protein Homology	CDS	785504	786199	.	+	0	ID=cds799;Parent=gene825;Dbxref=Genbank:WP_048875159.1;Name=WP_048875159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570274.1;product=(d)CMP kinase;protein_id=WP_048875159.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	786291	787940	.	+	.	ID=gene826;Name=CleRt_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03850;old_locus_tag=CleRT_07480
NZ_CP011126.1	Protein Homology	CDS	786291	787940	.	+	0	ID=cds800;Parent=gene826;Dbxref=Genbank:WP_048875160.1;Name=WP_048875160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220248.1;product=30S ribosomal protein S1;protein_id=WP_048875160.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	788167	788457	.	+	.	ID=gene827;Name=CleRt_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03855;old_locus_tag=CleRT_07490
NZ_CP011126.1	Protein Homology	CDS	788167	788457	.	+	0	ID=cds801;Parent=gene827;Dbxref=Genbank:WP_048875781.1;Name=WP_048875781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220249.1;product=DUF1049 domain-containing protein;protein_id=WP_048875781.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	788457	789623	.	+	.	ID=gene828;Name=CleRt_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03860;old_locus_tag=CleRT_07500
NZ_CP011126.1	Protein Homology	CDS	788457	789623	.	+	0	ID=cds802;Parent=gene828;Dbxref=Genbank:WP_048875161.1;Name=WP_048875161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771153.1;product=lipopolysaccharide assembly protein LapB;protein_id=WP_048875161.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	789625	790341	.	+	.	ID=gene829;Name=CleRt_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03865;old_locus_tag=CleRT_07510
NZ_CP011126.1	Protein Homology	CDS	789625	790341	.	+	0	ID=cds803;Parent=gene829;Dbxref=Genbank:WP_048875162.1;Name=WP_048875162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771152.1;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_048875162.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	790413	790749	.	+	.	ID=gene830;Name=CleRt_RS08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08990;old_locus_tag=CleRT_07520;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	790413	790749	.	+	0	ID=cds804;Parent=gene830;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771150.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	790852	791922	.	+	.	ID=gene831;Name=CleRt_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03870;old_locus_tag=CleRT_07530
NZ_CP011126.1	Protein Homology	CDS	790852	791922	.	+	0	ID=cds805;Parent=gene831;Dbxref=Genbank:WP_048875163.1;Name=WP_048875163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957641.1;product=undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=WP_048875163.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	792549	793819	.	-	.	ID=gene832;Name=CleRt_RS08995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08995;old_locus_tag=CleRT_07540;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	792549	793819	.	-	0	ID=cds806;Parent=gene832;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569858.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	794068	794331	.	-	.	ID=gene833;Name=CleRt_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03885
NZ_CP011126.1	Protein Homology	CDS	794068	794331	.	-	0	ID=cds807;Parent=gene833;Dbxref=Genbank:WP_048875166.1;Name=WP_048875166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05958.9;product=hypothetical protein;protein_id=WP_048875166.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	794774	794986	.	-	.	ID=gene834;Name=CleRt_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03890
NZ_CP011126.1	GeneMarkS+	CDS	794774	794986	.	-	0	ID=cds808;Parent=gene834;Dbxref=Genbank:WP_048875167.1;Name=WP_048875167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875167.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	795079	796449	.	+	.	ID=gene835;Name=CleRt_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03895;old_locus_tag=CleRT_07560
NZ_CP011126.1	Protein Homology	CDS	795079	796449	.	+	0	ID=cds809;Parent=gene835;Dbxref=Genbank:WP_048875168.1;Name=WP_048875168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958186.1;product=RIP metalloprotease RseP;protein_id=WP_048875168.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	797338	797517	.	+	.	ID=gene836;Name=CleRt_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03900
NZ_CP011126.1	GeneMarkS+	CDS	797338	797517	.	+	0	ID=cds810;Parent=gene836;Dbxref=Genbank:WP_053097860.1;Name=WP_053097860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097860.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	797824	798069	.	+	.	ID=gene837;Name=CleRt_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03905
NZ_CP011126.1	GeneMarkS+	CDS	797824	798069	.	+	0	ID=cds811;Parent=gene837;Dbxref=Genbank:WP_048875169.1;Name=WP_048875169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875169.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	798160	799683	.	+	.	ID=gene838;Name=tppB;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;locus_tag=CleRt_RS03910;old_locus_tag=CleRT_07580
NZ_CP011126.1	Protein Homology	CDS	798160	799683	.	+	0	ID=cds812;Parent=gene838;Dbxref=Genbank:WP_048875170.1;Name=WP_048875170.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220253.1;product=MFS transporter;protein_id=WP_048875170.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	799790	803302	.	+	.	ID=gene839;Name=CleRt_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03915;old_locus_tag=CleRT_07590
NZ_CP011126.1	Protein Homology	CDS	799790	803302	.	+	0	ID=cds813;Parent=gene839;Dbxref=Genbank:WP_048875171.1;Name=WP_048875171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997132.1;product=chromosome segregation protein SMC;protein_id=WP_048875171.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	803486	803848	.	+	.	ID=gene840;Name=CleRt_RS09000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09000;old_locus_tag=CleRT_07600;partial=true;pseudo=true;start_range=.,803486
NZ_CP011126.1	Protein Homology	CDS	803486	803848	.	+	0	ID=cds814;Parent=gene840;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957647.1;partial=true;product=cell division protein ZipA;pseudo=true;start_range=.,803486;transl_table=11
NZ_CP011126.1	RefSeq	gene	803881	805893	.	+	.	ID=gene841;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=CleRt_RS03925;old_locus_tag=CleRT_07610
NZ_CP011126.1	Protein Homology	CDS	803881	805893	.	+	0	ID=cds815;Parent=gene841;Dbxref=Genbank:WP_048875173.1;Name=WP_048875173.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772828.1;product=NAD-dependent DNA ligase LigA;protein_id=WP_048875173.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	806862	807125	.	+	.	ID=gene842;Name=CleRt_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03930
NZ_CP011126.1	GeneMarkS+	CDS	806862	807125	.	+	0	ID=cds816;Parent=gene842;Dbxref=Genbank:WP_048875174.1;Name=WP_048875174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875174.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	807155	807568	.	+	.	ID=gene843;Name=CleRt_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03935
NZ_CP011126.1	GeneMarkS+	CDS	807155	807568	.	+	0	ID=cds817;Parent=gene843;Dbxref=Genbank:WP_048875175.1;Name=WP_048875175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875175.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	808082	808330	.	+	.	ID=gene844;Name=CleRt_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03940
NZ_CP011126.1	GeneMarkS+	CDS	808082	808330	.	+	0	ID=cds818;Parent=gene844;Dbxref=Genbank:WP_048875176.1;Name=WP_048875176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875176.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	808493	808735	.	+	.	ID=gene845;Name=CleRt_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03945
NZ_CP011126.1	GeneMarkS+	CDS	808493	808735	.	+	0	ID=cds819;Parent=gene845;Dbxref=Genbank:WP_048875177.1;Name=WP_048875177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875177.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	808750	809067	.	+	.	ID=gene846;Name=CleRt_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03950;old_locus_tag=CleRT_07620
NZ_CP011126.1	GeneMarkS+	CDS	808750	809067	.	+	0	ID=cds820;Parent=gene846;Dbxref=Genbank:WP_048875178.1;Name=WP_048875178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875178.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	809572	810150	.	+	.	ID=gene847;Name=CleRt_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03955;old_locus_tag=CleRT_07630
NZ_CP011126.1	Protein Homology	CDS	809572	810150	.	+	0	ID=cds821;Parent=gene847;Dbxref=Genbank:WP_048875179.1;Name=WP_048875179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771138.1;product=LemA family protein;protein_id=WP_048875179.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	810159	811199	.	+	.	ID=gene848;Name=CleRt_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03960;old_locus_tag=CleRT_07640
NZ_CP011126.1	Protein Homology	CDS	810159	811199	.	+	0	ID=cds822;Parent=gene848;Dbxref=Genbank:WP_048875180.1;Name=WP_048875180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771137.1;product=zinc metalloprotease HtpX;protein_id=WP_048875180.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	811229	812941	.	-	.	ID=gene849;Name=CleRt_RS03965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03965;old_locus_tag=CleRT_07650;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	811229	812941	.	-	0	ID=cds823;Parent=gene849;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570265.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	812922	813923	.	-	.	ID=gene850;Name=CleRt_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03970;old_locus_tag=CleRT_07660
NZ_CP011126.1	Protein Homology	CDS	812922	813923	.	-	0	ID=cds824;Parent=gene850;Dbxref=Genbank:WP_048875181.1;Name=WP_048875181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570264.1;product=lytic murein transglycosylase B;protein_id=WP_048875181.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	813992	815140	.	-	.	ID=gene851;Name=CleRt_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03975;old_locus_tag=CleRT_07670
NZ_CP011126.1	Protein Homology	CDS	813992	815140	.	-	0	ID=cds825;Parent=gene851;Dbxref=Genbank:WP_048875182.1;Name=WP_048875182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005962793.1;product=rod shape-determining protein RodA;protein_id=WP_048875182.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	815137	816978	.	-	.	ID=gene852;Name=CleRt_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03980;old_locus_tag=CleRT_07680
NZ_CP011126.1	Protein Homology	CDS	815137	816978	.	-	0	ID=cds826;Parent=gene852;Dbxref=Genbank:WP_048875783.1;Name=WP_048875783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220261.1;product=penicillin-binding protein 2;protein_id=WP_048875783.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	816996	817447	.	-	.	ID=gene853;Name=CleRt_RS03985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS03985;old_locus_tag=CleRT_07690;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	816996	817447	.	-	0	ID=cds827;Parent=gene853;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013052671.1;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	817452	817787	.	-	.	ID=gene854;Name=CleRt_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03990;old_locus_tag=CleRT_07700
NZ_CP011126.1	Protein Homology	CDS	817452	817787	.	-	0	ID=cds828;Parent=gene854;Dbxref=Genbank:WP_048875183.1;Name=WP_048875183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957657.1;product=ribosome silencing factor;protein_id=WP_048875183.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	818477	819118	.	-	.	ID=gene855;Name=CleRt_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS03995;old_locus_tag=CleRT_07720
NZ_CP011126.1	Protein Homology	CDS	818477	819118	.	-	0	ID=cds829;Parent=gene855;Dbxref=Genbank:WP_048875184.1;Name=WP_048875184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771122.1;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_048875184.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	819115	820128	.	-	.	ID=gene856;Name=CleRt_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04000;old_locus_tag=CleRT_07730
NZ_CP011126.1	Protein Homology	CDS	819115	820128	.	-	0	ID=cds830;Parent=gene856;Dbxref=Genbank:WP_048875185.1;Name=WP_048875185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771120.1;product=DNA polymerase III subunit delta;protein_id=WP_048875185.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	820189	820713	.	-	.	ID=gene857;Name=CleRt_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04005;old_locus_tag=CleRT_07740
NZ_CP011126.1	Protein Homology	CDS	820189	820713	.	-	0	ID=cds831;Parent=gene857;Dbxref=Genbank:WP_048875186.1;Name=WP_048875186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570807.1;product=lipoprotein;protein_id=WP_048875186.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	820719	823181	.	-	.	ID=gene858;Name=CleRt_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04010;old_locus_tag=CleRT_07750
NZ_CP011126.1	Protein Homology	CDS	820719	823181	.	-	0	ID=cds832;Parent=gene858;Dbxref=Genbank:WP_048875187.1;Name=WP_048875187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957661.1;product=leucine--tRNA ligase;protein_id=WP_048875187.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	823438	824664	.	+	.	ID=gene859;Name=CleRt_RS04015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04015;old_locus_tag=CleRT_07760;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	823438	824664	.	+	0	ID=cds833;Parent=gene859;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772601.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	824636	826105	.	-	.	ID=gene860;Name=CleRt_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04020;old_locus_tag=CleRT_07770
NZ_CP011126.1	Protein Homology	CDS	824636	826105	.	-	0	ID=cds834;Parent=gene860;Dbxref=Genbank:WP_048875188.1;Name=WP_048875188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220270.1;product=apolipoprotein N-acyltransferase;protein_id=WP_048875188.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	826098	826906	.	-	.	ID=gene861;Name=CleRt_RS04025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04025;old_locus_tag=CleRT_07780;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	826098	826906	.	-	0	ID=cds835;Parent=gene861;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220271.1;product=magnesium/cobalt efflux protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	826951	827430	.	-	.	ID=gene862;Name=CleRt_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04030;old_locus_tag=CleRT_07790
NZ_CP011126.1	Protein Homology	CDS	826951	827430	.	-	0	ID=cds836;Parent=gene862;Dbxref=Genbank:WP_048875189.1;Name=WP_048875189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012638846.1;product=rRNA maturation RNase YbeY;protein_id=WP_048875189.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	827414	828401	.	-	.	ID=gene863;Name=CleRt_RS04035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04035;old_locus_tag=CleRT_07800;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	827414	828401	.	-	0	ID=cds837;Parent=gene863;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771100.1;product=phosphate starvation-inducible protein PhoH;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	828412	829731	.	-	.	ID=gene864;Name=CleRt_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04040;old_locus_tag=CleRT_07810
NZ_CP011126.1	Protein Homology	CDS	828412	829731	.	-	0	ID=cds838;Parent=gene864;Dbxref=Genbank:WP_048875190.1;Name=WP_048875190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997114.1;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_048875190.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	829837	831486	.	-	.	ID=gene865;Name=CleRt_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04045;old_locus_tag=CleRT_07820
NZ_CP011126.1	Protein Homology	CDS	829837	831486	.	-	0	ID=cds839;Parent=gene865;Dbxref=Genbank:WP_048875191.1;Name=WP_048875191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220273.1;product=APC family permease;protein_id=WP_048875191.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	832283	832691	.	+	.	ID=gene866;Name=CleRt_RS09005;end_range=832691,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09005;old_locus_tag=CleRT_07830;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	832283	832691	.	+	0	ID=cds840;Parent=gene866;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=832691,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997111.1;partial=true;product=acetyl-CoA acetyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	832722	834599	.	+	.	ID=gene867;Name=CleRt_RS04050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04050;old_locus_tag=CleRT_07840;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	832722	834599	.	+	0	ID=cds841;Parent=gene867;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771084.1;product=crotonase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	834761	835099	.	+	.	ID=gene868;Name=CleRt_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09010
NZ_CP011126.1	GeneMarkS+	CDS	834761	835099	.	+	0	ID=cds842;Parent=gene868;Dbxref=Genbank:WP_082160425.1;Name=WP_082160425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160425.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	836177	836512	.	-	.	ID=gene869;Name=CleRt_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04060;old_locus_tag=CleRT_07870
NZ_CP011126.1	Protein Homology	CDS	836177	836512	.	-	0	ID=cds843;Parent=gene869;Dbxref=Genbank:WP_048875192.1;Name=WP_048875192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771072.1;product=ferredoxin family protein;protein_id=WP_048875192.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	836628	836873	.	+	.	ID=gene870;Name=CleRt_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04065;old_locus_tag=CleRT_07880
NZ_CP011126.1	Protein Homology	CDS	836628	836873	.	+	0	ID=cds844;Parent=gene870;Dbxref=Genbank:WP_048875193.1;Name=WP_048875193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771070.1;product=BolA family transcriptional regulator;protein_id=WP_048875193.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	837006	837314	.	+	.	ID=gene871;Name=CleRt_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04070;old_locus_tag=CleRT_07890
NZ_CP011126.1	Protein Homology	CDS	837006	837314	.	+	0	ID=cds845;Parent=gene871;Dbxref=Genbank:WP_048875194.1;Name=WP_048875194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019916790.1;product=monothiol glutaredoxin%2C Grx4 family;protein_id=WP_048875194.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	837318	837518	.	-	.	ID=gene872;Name=CleRt_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04075;old_locus_tag=CleRT_07900
NZ_CP011126.1	Protein Homology	CDS	837318	837518	.	-	0	ID=cds846;Parent=gene872;Dbxref=Genbank:WP_048875195.1;Name=WP_048875195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570245.1;product=hypothetical protein;protein_id=WP_048875195.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	837576	841094	.	+	.	ID=gene873;Name=CleRt_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04080;old_locus_tag=CleRT_07910
NZ_CP011126.1	Protein Homology	CDS	837576	841094	.	+	0	ID=cds847;Parent=gene873;Dbxref=Genbank:WP_082160426.1;Name=WP_082160426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570800.1;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=WP_082160426.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	841140	841431	.	+	.	ID=gene874;Name=CleRt_RS09015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09015;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	841140	841431	.	+	0	ID=cds848;Parent=gene874;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957677.1;product=thiosulfate sulfurtransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	841431	842366	.	+	.	ID=gene875;Name=CleRt_RS04085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04085;old_locus_tag=CleRT_07920;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	841431	842366	.	+	0	ID=cds849;Parent=gene875;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570244.1;product=quinolinate synthase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	842353	842704	.	+	.	ID=gene876;Name=CleRt_RS04090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04090;old_locus_tag=CleRT_07930;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	842353	842704	.	+	0	ID=cds850;Parent=gene876;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771057.1;product=ferredoxin;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	842727	843551	.	+	.	ID=gene877;Name=CleRt_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04095;old_locus_tag=CleRT_07940
NZ_CP011126.1	Protein Homology	CDS	842727	843551	.	+	0	ID=cds851;Parent=gene877;Dbxref=Genbank:WP_048875784.1;Name=WP_048875784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771055.1;product=DUF2797 domain-containing protein;protein_id=WP_048875784.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	843552	843848	.	+	.	ID=gene878;Name=CleRt_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04100;old_locus_tag=CleRT_07950
NZ_CP011126.1	Protein Homology	CDS	843552	843848	.	+	0	ID=cds852;Parent=gene878;Dbxref=Genbank:WP_048875197.1;Name=WP_048875197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997102.1;product=hypothetical protein;protein_id=WP_048875197.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	844899	845388	.	-	.	ID=gene879;Name=CleRt_RS09020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09020;old_locus_tag=CleRT_07960;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	844899	845388	.	-	0	ID=cds853;Parent=gene879;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958609.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	846230	846424	.	-	.	ID=gene880;Name=CleRt_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04105
NZ_CP011126.1	GeneMarkS+	CDS	846230	846424	.	-	0	ID=cds854;Parent=gene880;Dbxref=Genbank:WP_048875198.1;Name=WP_048875198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875198.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	847543	847776	.	-	.	ID=gene881;Name=CleRt_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04110
NZ_CP011126.1	GeneMarkS+	CDS	847543	847776	.	-	0	ID=cds855;Parent=gene881;Dbxref=Genbank:WP_048875199.1;Name=WP_048875199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875199.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	849408	850531	.	-	.	ID=gene882;Name=CleRt_RS04115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04115;old_locus_tag=CleRT_08000;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	849408	850531	.	-	0	ID=cds856;Parent=gene882;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253060.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	850765	851088	.	+	.	ID=gene883;Name=CleRt_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08320
NZ_CP011126.1	GeneMarkS+	CDS	850765	851088	.	+	0	ID=cds857;Parent=gene883;Dbxref=Genbank:WP_053097862.1;Name=WP_053097862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097862.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	851123	851416	.	+	.	ID=gene884;Name=CleRt_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08325
NZ_CP011126.1	GeneMarkS+	CDS	851123	851416	.	+	0	ID=cds858;Parent=gene884;Dbxref=Genbank:WP_053097864.1;Name=WP_053097864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097864.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	851638	852778	.	-	.	ID=gene885;Name=CleRt_RS04125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04125;old_locus_tag=CleRT_08020;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	851638	852778	.	-	0	ID=cds859;Parent=gene885;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772850.1;product=YggW family oxidoreductase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	852828	853370	.	+	.	ID=gene886;Name=CleRt_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04130;old_locus_tag=CleRT_08030
NZ_CP011126.1	Protein Homology	CDS	852828	853370	.	+	0	ID=cds860;Parent=gene886;Dbxref=Genbank:WP_048875200.1;Name=WP_048875200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771049.1;product=ADP compounds hydrolase NudE;protein_id=WP_048875200.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	853363	854196	.	+	.	ID=gene887;Name=CleRt_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04135;old_locus_tag=CleRT_08040
NZ_CP011126.1	Protein Homology	CDS	853363	854196	.	+	0	ID=cds861;Parent=gene887;Dbxref=Genbank:WP_048875201.1;Name=WP_048875201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570239.1;product=3'(2')%2C5'-bisphosphate nucleotidase;protein_id=WP_048875201.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	854193	855185	.	+	.	ID=gene888;Name=CleRt_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04140;old_locus_tag=CleRT_08050
NZ_CP011126.1	Protein Homology	CDS	854193	855185	.	+	0	ID=cds862;Parent=gene888;Dbxref=Genbank:WP_048875202.1;Name=WP_048875202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958098.1;product=malate dehydrogenase;protein_id=WP_048875202.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	855959	856984	.	+	.	ID=gene889;Name=CleRt_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04145;old_locus_tag=CleRT_08060
NZ_CP011126.1	Protein Homology	CDS	855959	856984	.	+	0	ID=cds863;Parent=gene889;Dbxref=Genbank:WP_048875203.1;Name=WP_048875203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015939987.1;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_048875203.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	856981	857565	.	-	.	ID=gene890;Name=CleRt_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04150;old_locus_tag=CleRT_08070
NZ_CP011126.1	Protein Homology	CDS	856981	857565	.	-	0	ID=cds864;Parent=gene890;Dbxref=Genbank:WP_048875204.1;Name=WP_048875204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770791.1;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=WP_048875204.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	857654	858199	.	-	.	ID=gene891;Name=CleRt_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04155;old_locus_tag=CleRT_08080
NZ_CP011126.1	Protein Homology	CDS	857654	858199	.	-	0	ID=cds865;Parent=gene891;Dbxref=Genbank:WP_048875205.1;Name=WP_048875205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770781.1;product=oligoribonuclease;protein_id=WP_048875205.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	858292	859191	.	-	.	ID=gene892;Name=CleRt_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04160;old_locus_tag=CleRT_08090
NZ_CP011126.1	Protein Homology	CDS	858292	859191	.	-	0	ID=cds866;Parent=gene892;Dbxref=Genbank:WP_048875206.1;Name=WP_048875206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009669215.1;product=5'-nucleotidase;protein_id=WP_048875206.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	859203	862553	.	-	.	ID=gene893;Name=CleRt_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04165;old_locus_tag=CleRT_08100
NZ_CP011126.1	Protein Homology	CDS	859203	862553	.	-	0	ID=cds867;Parent=gene893;Dbxref=Genbank:WP_048875207.1;Name=WP_048875207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958091.1;product=ATP-dependent helicase;protein_id=WP_048875207.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	862550	865093	.	-	.	ID=gene894;Name=CleRt_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04170;old_locus_tag=CleRT_08110
NZ_CP011126.1	Protein Homology	CDS	862550	865093	.	-	0	ID=cds868;Parent=gene894;Dbxref=Genbank:WP_048875208.1;Name=WP_048875208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220563.1;product=ATP-dependent helicase;protein_id=WP_048875208.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	865444	866320	.	-	.	ID=gene895;Name=CleRt_RS04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04175;old_locus_tag=CleRT_08120;partial=true;pseudo=true;start_range=.,865444
NZ_CP011126.1	Protein Homology	CDS	865444	866320	.	-	0	ID=cds869;Parent=gene895;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770760.1;partial=true;product=two-component sensor histidine kinase;pseudo=true;start_range=.,865444;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	866235	866919	.	-	.	ID=gene896;Name=CleRt_RS04180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04180;old_locus_tag=CleRT_08130;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	866235	866919	.	-	0	ID=cds870;Parent=gene896;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537923.1;product=DNA-binding response regulator;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	867155	871960	.	+	.	ID=gene897;Name=CleRt_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04185;old_locus_tag=CleRT_08140
NZ_CP011126.1	Protein Homology	CDS	867155	871960	.	+	0	ID=cds871;Parent=gene897;Dbxref=Genbank:WP_048875785.1;Name=WP_048875785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017377008.1;product=NAD-glutamate dehydrogenase;protein_id=WP_048875785.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	871970	872815	.	+	.	ID=gene898;Name=CleRt_RS04190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04190;old_locus_tag=CleRT_08150;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	871970	872815	.	+	0	ID=cds872;Parent=gene898;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220560.1;product=haloalkane dehalogenase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	872920	873117	.	+	.	ID=gene899;Name=CleRt_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04195;old_locus_tag=CleRT_08160
NZ_CP011126.1	Protein Homology	CDS	872920	873117	.	+	0	ID=cds873;Parent=gene899;Dbxref=Genbank:WP_048875209.1;Name=WP_048875209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770752.1;product=hypothetical protein;protein_id=WP_048875209.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	873274	874530	.	-	.	ID=gene900;Name=CleRt_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04200;old_locus_tag=CleRT_08170
NZ_CP011126.1	Protein Homology	CDS	873274	874530	.	-	0	ID=cds874;Parent=gene900;Dbxref=Genbank:WP_082160499.1;Name=WP_082160499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958086.1;product=DNA recombination protein RmuC;protein_id=WP_082160499.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	874566	875322	.	+	.	ID=gene901;Name=CleRt_RS09025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09025;old_locus_tag=CleRT_08180;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	874566	875322	.	+	0	ID=cds875;Parent=gene901;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569936.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	875914	876795	.	+	.	ID=gene902;Name=CleRt_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04210;old_locus_tag=CleRT_08190
NZ_CP011126.1	Protein Homology	CDS	875914	876795	.	+	0	ID=cds876;Parent=gene902;Dbxref=Genbank:WP_048875786.1;Name=WP_048875786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007145178.1;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_048875786.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	876809	877402	.	+	.	ID=gene903;Name=CleRt_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04215;old_locus_tag=CleRT_08200
NZ_CP011126.1	Protein Homology	CDS	876809	877402	.	+	0	ID=cds877;Parent=gene903;Dbxref=Genbank:WP_048875211.1;Name=WP_048875211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220557.1;product=outer membrane protein assembly factor BamC;protein_id=WP_048875211.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	877414	878025	.	+	.	ID=gene904;Name=CleRt_RS04220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04220;old_locus_tag=CleRT_08210;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	877414	878025	.	+	0	ID=cds878;Parent=gene904;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011398660.1;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	878133	878225	.	+	.	ID=gene905;Name=CleRt_RS04225;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04225;old_locus_tag=CleRT_t025
NZ_CP011126.1	tRNAscan-SE	tRNA	878133	878225	.	+	.	ID=rna26;Parent=gene905;anticodon=(pos:878168..878170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	tRNAscan-SE	exon	878133	878225	.	+	.	ID=id27;Parent=rna26;anticodon=(pos:878168..878170);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	RefSeq	gene	878466	878744	.	-	.	ID=gene906;Name=CleRt_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04230
NZ_CP011126.1	GeneMarkS+	CDS	878466	878744	.	-	0	ID=cds879;Parent=gene906;Dbxref=Genbank:WP_048875212.1;Name=WP_048875212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875212.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	879749	879935	.	+	.	ID=gene907;Name=CleRt_RS09030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09030;old_locus_tag=CleRT_08220;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	879749	879935	.	+	0	ID=cds880;Parent=gene907;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020182297.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	880171	880323	.	-	.	ID=gene908;Name=CleRt_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09035
NZ_CP011126.1	Protein Homology	CDS	880171	880323	.	-	0	ID=cds881;Parent=gene908;Dbxref=Genbank:WP_082160500.1;Name=WP_082160500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000679416.1;product=hypothetical protein;protein_id=WP_082160500.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	880337	881301	.	-	.	ID=gene909;Name=CleRt_RS09040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09040;old_locus_tag=CleRT_08240;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	880337	881301	.	-	0	ID=cds882;Parent=gene909;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772565.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	881314	882773	.	-	.	ID=gene910;Name=CleRt_RS04235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04235;old_locus_tag=CleRT_08250;partial=true;pseudo=true;start_range=.,881314
NZ_CP011126.1	Protein Homology	CDS	881314	882773	.	-	0	ID=cds883;Parent=gene910;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770730.1;partial=true;product=FMN-binding glutamate synthase family protein;pseudo=true;start_range=.,881314;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	882934	883975	.	+	.	ID=gene911;Name=CleRt_RS04240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04240;old_locus_tag=CleRT_08260;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	882934	883975	.	+	0	ID=cds884;Parent=gene911;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770726.1;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	884031	885287	.	+	.	ID=gene912;Name=CleRt_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04245;old_locus_tag=CleRT_08270
NZ_CP011126.1	Protein Homology	CDS	884031	885287	.	+	0	ID=cds885;Parent=gene912;Dbxref=Genbank:WP_048875213.1;Name=WP_048875213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018952427.1;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_048875213.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	886176	887682	.	+	.	ID=gene913;Name=CleRt_RS09045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09045;old_locus_tag=CleRT_08280;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	886176	887682	.	+	0	ID=cds886;Parent=gene913;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220547.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	887750	887995	.	-	.	ID=gene914;Name=CleRt_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04255;old_locus_tag=CleRT_08290
NZ_CP011126.1	Protein Homology	CDS	887750	887995	.	-	0	ID=cds887;Parent=gene914;Dbxref=Genbank:WP_048875214.1;Name=WP_048875214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770719.1;product=translation initiation factor IF-1;protein_id=WP_048875214.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	888417	889376	.	-	.	ID=gene915;Name=CleRt_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04260;old_locus_tag=CleRT_08300
NZ_CP011126.1	Protein Homology	CDS	888417	889376	.	-	0	ID=cds888;Parent=gene915;Dbxref=Genbank:WP_048875215.1;Name=WP_048875215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770716.1;product=thioredoxin-disulfide reductase;protein_id=WP_048875215.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	889543	891882	.	+	.	ID=gene916;Name=CleRt_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04265;old_locus_tag=CleRT_08310
NZ_CP011126.1	Protein Homology	CDS	889543	891882	.	+	0	ID=cds889;Parent=gene916;Dbxref=Genbank:WP_048875216.1;Name=WP_048875216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569953.1;product=DNA translocase FtsK;protein_id=WP_048875216.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	891952	892674	.	+	.	ID=gene917;Name=CleRt_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04270;old_locus_tag=CleRT_08320
NZ_CP011126.1	Protein Homology	CDS	891952	892674	.	+	0	ID=cds890;Parent=gene917;Dbxref=Genbank:WP_082160501.1;Name=WP_082160501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958062.1;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_082160501.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	892610	893687	.	+	.	ID=gene918;Name=CleRt_RS04275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04275;old_locus_tag=CleRT_08330;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	892610	893687	.	+	0	ID=cds891;Parent=gene918;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770708.1;product=recombination factor protein RarA;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	893779	894153	.	+	.	ID=gene919;Name=CleRt_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04280;old_locus_tag=CleRT_08340
NZ_CP011126.1	Protein Homology	CDS	893779	894153	.	+	0	ID=cds892;Parent=gene919;Dbxref=Genbank:WP_048875217.1;Name=WP_048875217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02537.13;product=CrcB family protein;protein_id=WP_048875217.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	894147	895421	.	+	.	ID=gene920;Name=CleRt_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04285;old_locus_tag=CleRT_08350
NZ_CP011126.1	Protein Homology	CDS	894147	895421	.	+	0	ID=cds893;Parent=gene920;Dbxref=Genbank:WP_048875218.1;Name=WP_048875218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011396325.1;product=serine--tRNA ligase;protein_id=WP_048875218.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	896011	896099	.	+	.	ID=gene921;Name=CleRt_RS04290;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04290;old_locus_tag=CleRT_t026
NZ_CP011126.1	tRNAscan-SE	tRNA	896011	896099	.	+	.	ID=rna27;Parent=gene921;anticodon=(pos:896045..896047);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	tRNAscan-SE	exon	896011	896099	.	+	.	ID=id28;Parent=rna27;anticodon=(pos:896045..896047);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	RefSeq	gene	896114	897982	.	+	.	ID=gene922;Name=CleRt_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04295;old_locus_tag=CleRT_08370
NZ_CP011126.1	Protein Homology	CDS	896114	897982	.	+	0	ID=cds894;Parent=gene922;Dbxref=Genbank:WP_048875219.1;Name=WP_048875219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253450.1;product=excinuclease ABC subunit UvrC;protein_id=WP_048875219.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	897979	898539	.	+	.	ID=gene923;Name=CleRt_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04300;old_locus_tag=CleRT_08380
NZ_CP011126.1	Protein Homology	CDS	897979	898539	.	+	0	ID=cds895;Parent=gene923;Dbxref=Genbank:WP_048875220.1;Name=WP_048875220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220362.1;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_048875220.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	898655	898730	.	+	.	ID=gene924;Name=CleRt_RS04305;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04305;old_locus_tag=CleRT_t027
NZ_CP011126.1	tRNAscan-SE	tRNA	898655	898730	.	+	.	ID=rna28;Parent=gene924;anticodon=(pos:898688..898690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Gly
NZ_CP011126.1	tRNAscan-SE	exon	898655	898730	.	+	.	ID=id29;Parent=rna28;anticodon=(pos:898688..898690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Gly
NZ_CP011126.1	RefSeq	gene	898727	899005	.	-	.	ID=gene925;Name=CleRt_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04310;old_locus_tag=CleRT_08390
NZ_CP011126.1	GeneMarkS+	CDS	898727	899005	.	-	0	ID=cds896;Parent=gene925;Dbxref=Genbank:WP_048875221.1;Name=WP_048875221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875221.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	900107	900439	.	-	.	ID=gene926;Name=CleRt_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04315;old_locus_tag=CleRT_08410
NZ_CP011126.1	GeneMarkS+	CDS	900107	900439	.	-	0	ID=cds897;Parent=gene926;Dbxref=Genbank:WP_048875222.1;Name=WP_048875222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875222.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	901105	901461	.	-	.	ID=gene927;Name=CleRt_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04320
NZ_CP011126.1	GeneMarkS+	CDS	901105	901461	.	-	0	ID=cds898;Parent=gene927;Dbxref=Genbank:WP_048875223.1;Name=WP_048875223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875223.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	901612	901839	.	+	.	ID=gene928;Name=CleRt_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04325
NZ_CP011126.1	GeneMarkS+	CDS	901612	901839	.	+	0	ID=cds899;Parent=gene928;Dbxref=Genbank:WP_048875224.1;Name=WP_048875224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875224.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	901890	902093	.	-	.	ID=gene929;Name=CleRt_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04330
NZ_CP011126.1	GeneMarkS+	CDS	901890	902093	.	-	0	ID=cds900;Parent=gene929;Dbxref=Genbank:WP_048875225.1;Name=WP_048875225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875225.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	902422	902778	.	+	.	ID=gene930;Name=CleRt_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04335;old_locus_tag=CleRT_08430
NZ_CP011126.1	GeneMarkS+	CDS	902422	902778	.	+	0	ID=cds901;Parent=gene930;Dbxref=Genbank:WP_048875226.1;Name=WP_048875226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875226.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	902801	903037	.	+	.	ID=gene931;Name=CleRt_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04340
NZ_CP011126.1	GeneMarkS+	CDS	902801	903037	.	+	0	ID=cds902;Parent=gene931;Dbxref=Genbank:WP_048875227.1;Name=WP_048875227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875227.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	903182	903442	.	+	.	ID=gene932;Name=CleRt_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04345;old_locus_tag=CleRT_08440
NZ_CP011126.1	Protein Homology	CDS	903182	903442	.	+	0	ID=cds903;Parent=gene932;Dbxref=Genbank:WP_048875228.1;Name=WP_048875228.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13274.4;product=DUF4065 domain-containing protein;protein_id=WP_048875228.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	905099	906430	.	-	.	ID=gene933;Name=CleRt_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04350;old_locus_tag=CleRT_08450
NZ_CP011126.1	Protein Homology	CDS	905099	906430	.	-	0	ID=cds904;Parent=gene933;Dbxref=Genbank:WP_048875229.1;Name=WP_048875229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768249.1;product=MFS transporter;protein_id=WP_048875229.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	907134	907799	.	-	.	ID=gene934;Name=CleRt_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04355;old_locus_tag=CleRT_08470
NZ_CP011126.1	Protein Homology	CDS	907134	907799	.	-	0	ID=cds905;Parent=gene934;Dbxref=Genbank:WP_048875230.1;Name=WP_048875230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008235822.1;product=SAM-dependent methyltransferase;protein_id=WP_048875230.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	908127	908717	.	-	.	ID=gene935;Name=CleRt_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04360;old_locus_tag=CleRT_08480
NZ_CP011126.1	Protein Homology	CDS	908127	908717	.	-	0	ID=cds906;Parent=gene935;Dbxref=Genbank:WP_048875231.1;Name=WP_048875231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768240.1;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_048875231.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	908735	909418	.	-	.	ID=gene936;Name=CleRt_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04365;old_locus_tag=CleRT_08490
NZ_CP011126.1	Protein Homology	CDS	908735	909418	.	-	0	ID=cds907;Parent=gene936;Dbxref=Genbank:WP_048875232.1;Name=WP_048875232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005012554.1;product=DNA-3-methyladenine glycosylase;protein_id=WP_048875232.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	909446	909703	.	-	.	ID=gene937;Name=CleRt_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04370
NZ_CP011126.1	GeneMarkS+	CDS	909446	909703	.	-	0	ID=cds908;Parent=gene937;Dbxref=Genbank:WP_048875233.1;Name=WP_048875233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875233.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	910590	911369	.	-	.	ID=gene938;Name=CleRt_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04375;old_locus_tag=CleRT_08510
NZ_CP011126.1	Protein Homology	CDS	910590	911369	.	-	0	ID=cds909;Parent=gene938;Dbxref=Genbank:WP_048875234.1;Name=WP_048875234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772497.1;product=ABC transporter permease;protein_id=WP_048875234.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	911369	912280	.	-	.	ID=gene939;Name=CleRt_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04380;old_locus_tag=CleRT_08520
NZ_CP011126.1	Protein Homology	CDS	911369	912280	.	-	0	ID=cds910;Parent=gene939;Dbxref=Genbank:WP_048875235.1;Name=WP_048875235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768225.1;product=ABC transporter ATP-binding protein;protein_id=WP_048875235.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	912277	912663	.	-	.	ID=gene940;Name=CleRt_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04385;old_locus_tag=CleRT_08530
NZ_CP011126.1	Protein Homology	CDS	912277	912663	.	-	0	ID=cds911;Parent=gene940;Dbxref=Genbank:WP_048875236.1;Name=WP_048875236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253206.1;product=RNA-binding protein;protein_id=WP_048875236.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	912788	913000	.	-	.	ID=gene941;Name=CleRt_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04390
NZ_CP011126.1	GeneMarkS+	CDS	912788	913000	.	-	0	ID=cds912;Parent=gene941;Dbxref=Genbank:WP_048875237.1;Name=WP_048875237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875237.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	913412	914866	.	+	.	ID=gene942;Name=CleRt_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04395;old_locus_tag=CleRT_08550
NZ_CP011126.1	Protein Homology	CDS	913412	914866	.	+	0	ID=cds913;Parent=gene942;Dbxref=Genbank:WP_048875238.1;Name=WP_048875238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253207.1;product=hypothetical protein;protein_id=WP_048875238.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	915243	915383	.	-	.	ID=gene943;Name=CleRt_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09050
NZ_CP011126.1	Protein Homology	CDS	915243	915383	.	-	0	ID=cds914;Parent=gene943;Dbxref=Genbank:WP_082160427.1;Name=WP_082160427.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02390.15;product=hypothetical protein;protein_id=WP_082160427.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	915720	915790	.	+	.	ID=gene944;Name=CleRt_RS04400;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04400;old_locus_tag=CleRT_t028
NZ_CP011126.1	tRNAscan-SE	tRNA	915720	915790	.	+	.	ID=rna29;Parent=gene944;anticodon=(pos:915752..915754);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Gly
NZ_CP011126.1	tRNAscan-SE	exon	915720	915790	.	+	.	ID=id30;Parent=rna29;anticodon=(pos:915752..915754);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Gly
NZ_CP011126.1	RefSeq	pseudogene	915820	916531	.	+	.	ID=gene945;Name=CleRt_RS09055;end_range=916531,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09055;old_locus_tag=CleRT_08570;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	915820	916531	.	+	0	ID=cds915;Parent=gene945;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=916531,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772812.1;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	916550	917608	.	+	.	ID=gene946;Name=CleRt_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04410;old_locus_tag=CleRT_08580
NZ_CP011126.1	Protein Homology	CDS	916550	917608	.	+	0	ID=cds916;Parent=gene946;Dbxref=Genbank:WP_048875788.1;Name=WP_048875788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768498.1;product=adenine DNA glycosylase;protein_id=WP_048875788.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	917610	917882	.	+	.	ID=gene947;Name=CleRt_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04415;old_locus_tag=CleRT_08590
NZ_CP011126.1	Protein Homology	CDS	917610	917882	.	+	0	ID=cds917;Parent=gene947;Dbxref=Genbank:WP_048875240.1;Name=WP_048875240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768500.1;product=oxidative damage protection protein;protein_id=WP_048875240.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	917879	918281	.	-	.	ID=gene948;Name=CleRt_RS09060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09060;old_locus_tag=CleRT_08600;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	917879	918281	.	-	0	ID=cds918;Parent=gene948;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957905.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	918428	918794	.	+	.	ID=gene949;Name=CleRt_RS04420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04420;old_locus_tag=CleRT_08610;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	918428	918794	.	+	0	ID=cds919;Parent=gene949;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768504.1;product=rhodanese;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	918840	918915	.	+	.	ID=gene950;Name=CleRt_RS04425;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04425;old_locus_tag=CleRT_t029
NZ_CP011126.1	tRNAscan-SE	tRNA	918840	918915	.	+	.	ID=rna30;Parent=gene950;anticodon=(pos:918873..918875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Phe
NZ_CP011126.1	tRNAscan-SE	exon	918840	918915	.	+	.	ID=id31;Parent=rna30;anticodon=(pos:918873..918875);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Phe
NZ_CP011126.1	RefSeq	pseudogene	920343	920866	.	-	.	ID=gene951;Name=CleRt_RS09065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09065;old_locus_tag=CleRT_08630;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	920343	920866	.	-	0	ID=cds920;Parent=gene951;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220193.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	920895	921567	.	-	.	ID=gene952;Name=CleRt_RS04430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04430;old_locus_tag=CleRT_08640;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	920895	921567	.	-	0	ID=cds921;Parent=gene952;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006340289.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	921796	922062	.	-	.	ID=gene953;Name=CleRt_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04435;old_locus_tag=CleRT_08650
NZ_CP011126.1	GeneMarkS+	CDS	921796	922062	.	-	0	ID=cds922;Parent=gene953;Dbxref=Genbank:WP_048875241.1;Name=WP_048875241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875241.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	923472	923666	.	+	.	ID=gene954;Name=CleRt_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04440
NZ_CP011126.1	GeneMarkS+	CDS	923472	923666	.	+	0	ID=cds923;Parent=gene954;Dbxref=Genbank:WP_048875242.1;Name=WP_048875242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875242.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	924941	925473	.	-	.	ID=gene955;Name=CleRt_RS09070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09070;old_locus_tag=CleRT_08680;partial=true;pseudo=true;start_range=.,924941
NZ_CP011126.1	Protein Homology	CDS	924941	925473	.	-	0	ID=cds924;Parent=gene955;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768256.1;partial=true;product=hypothetical protein;pseudo=true;start_range=.,924941;transl_table=11
NZ_CP011126.1	RefSeq	gene	925580	926797	.	+	.	ID=gene956;Name=CleRt_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04450;old_locus_tag=CleRT_08690
NZ_CP011126.1	Protein Homology	CDS	925580	926797	.	+	0	ID=cds925;Parent=gene956;Dbxref=Genbank:WP_048875244.1;Name=WP_048875244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010947587.1;product=integrase;protein_id=WP_048875244.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	926786	926986	.	-	.	ID=gene957;Name=CleRt_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04455
NZ_CP011126.1	GeneMarkS+	CDS	926786	926986	.	-	0	ID=cds926;Parent=gene957;Dbxref=Genbank:WP_048875245.1;Name=WP_048875245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875245.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	927160	927339	.	+	.	ID=gene958;Name=CleRt_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04460
NZ_CP011126.1	GeneMarkS+	CDS	927160	927339	.	+	0	ID=cds927;Parent=gene958;Dbxref=Genbank:WP_048875246.1;Name=WP_048875246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875246.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	929690	929956	.	+	.	ID=gene959;Name=CleRt_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04465
NZ_CP011126.1	GeneMarkS+	CDS	929690	929956	.	+	0	ID=cds928;Parent=gene959;Dbxref=Genbank:WP_048875247.1;Name=WP_048875247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875247.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	930556	930846	.	-	.	ID=gene960;Name=CleRt_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04470;old_locus_tag=CleRT_08710
NZ_CP011126.1	Protein Homology	CDS	930556	930846	.	-	0	ID=cds929;Parent=gene960;Dbxref=Genbank:WP_048875248.1;Name=WP_048875248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005220224.1;product=hypothetical protein;protein_id=WP_048875248.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	931273	931602	.	+	.	ID=gene961;Name=CleRt_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08355
NZ_CP011126.1	GeneMarkS+	CDS	931273	931602	.	+	0	ID=cds930;Parent=gene961;Dbxref=Genbank:WP_053097883.1;Name=WP_053097883.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097883.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	932707	933444	.	-	.	ID=gene962;Name=CleRt_RS04480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04480;old_locus_tag=CleRT_08740;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	932707	933444	.	-	0	ID=cds931;Parent=gene962;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996946.1;product=tRNA 2-thiocytidine(32) synthetase TtcA;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	933633	934049	.	-	.	ID=gene963;Name=CleRt_RS04485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04485;old_locus_tag=CleRT_08750;partial=true;pseudo=true;start_range=.,933633
NZ_CP011126.1	Protein Homology	CDS	933633	934049	.	-	0	ID=cds932;Parent=gene963;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570007.1;partial=true;product=hypothetical protein;pseudo=true;start_range=.,933633;transl_table=11
NZ_CP011126.1	RefSeq	gene	934281	934577	.	+	.	ID=gene964;Name=CleRt_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09075
NZ_CP011126.1	Protein Homology	CDS	934281	934577	.	+	0	ID=cds933;Parent=gene964;Dbxref=Genbank:WP_082160428.1;Name=WP_082160428.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00449;product=hypothetical protein;protein_id=WP_082160428.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	934863	935087	.	+	.	ID=gene965;Name=CleRt_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09080
NZ_CP011126.1	GeneMarkS+	CDS	934863	935087	.	+	0	ID=cds934;Parent=gene965;Dbxref=Genbank:WP_082160429.1;Name=WP_082160429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160429.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	935294	935500	.	+	.	ID=gene966;Name=CleRt_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04495
NZ_CP011126.1	GeneMarkS+	CDS	935294	935500	.	+	0	ID=cds935;Parent=gene966;Dbxref=Genbank:WP_048875249.1;Name=WP_048875249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875249.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	935844	936404	.	-	.	ID=gene967;Name=CleRt_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04500;old_locus_tag=CleRT_08780
NZ_CP011126.1	Protein Homology	CDS	935844	936404	.	-	0	ID=cds936;Parent=gene967;Dbxref=Genbank:WP_048875250.1;Name=WP_048875250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957989.1;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_048875250.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	936391	937548	.	-	.	ID=gene968;Name=CleRt_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04505;old_locus_tag=CleRT_08790
NZ_CP011126.1	Protein Homology	CDS	936391	937548	.	-	0	ID=cds937;Parent=gene968;Dbxref=Genbank:WP_048875789.1;Name=WP_048875789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957990.1;product=mechanosensitive ion channel family protein;protein_id=WP_048875789.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	937734	938654	.	-	.	ID=gene969;Name=CleRt_RS04510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04510;old_locus_tag=CleRT_08800;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	937734	938654	.	-	0	ID=cds938;Parent=gene969;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957992.1;product=beta-N-acetylhexosaminidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	938660	938998	.	-	.	ID=gene970;Name=CleRt_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04515;old_locus_tag=CleRT_08810
NZ_CP011126.1	Protein Homology	CDS	938660	938998	.	-	0	ID=cds939;Parent=gene970;Dbxref=Genbank:WP_048875251.1;Name=WP_048875251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768322.1;product=DUF1820 domain-containing protein;protein_id=WP_048875251.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	939006	939561	.	-	.	ID=gene971;Name=CleRt_RS09085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09085;old_locus_tag=CleRT_08820;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	939006	939561	.	-	0	ID=cds940;Parent=gene971;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768324.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	939570	940071	.	-	.	ID=gene972;Name=CleRt_RS04525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04525;old_locus_tag=CleRT_08830;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	939570	940071	.	-	0	ID=cds941;Parent=gene972;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570000.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	940143	940361	.	-	.	ID=gene973;Name=CleRt_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04530
NZ_CP011126.1	Protein Homology	CDS	940143	940361	.	-	0	ID=cds942;Parent=gene973;Dbxref=Genbank:WP_048875252.1;Name=WP_048875252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220336.1;product=hypothetical protein;protein_id=WP_048875252.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	940368	941294	.	-	.	ID=gene974;Name=CleRt_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04535;old_locus_tag=CleRT_08840
NZ_CP011126.1	Protein Homology	CDS	940368	941294	.	-	0	ID=cds943;Parent=gene974;Dbxref=Genbank:WP_048875253.1;Name=WP_048875253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252775.1;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_048875253.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	941296	943044	.	-	.	ID=gene975;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=CleRt_RS04540;old_locus_tag=CleRT_08850
NZ_CP011126.1	Protein Homology	CDS	941296	943044	.	-	0	ID=cds944;Parent=gene975;Dbxref=Genbank:WP_048875254.1;Name=WP_048875254.1;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;gbkey=CDS;gene=mutL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220334.1;product=DNA mismatch repair protein MutL;protein_id=WP_048875254.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	943060	943383	.	+	.	ID=gene976;Name=CleRt_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04545
NZ_CP011126.1	GeneMarkS+	CDS	943060	943383	.	+	0	ID=cds945;Parent=gene976;Dbxref=Genbank:WP_048875255.1;Name=WP_048875255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875255.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	944686	945939	.	-	.	ID=gene977;Name=CleRt_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04550;old_locus_tag=CleRT_08870
NZ_CP011126.1	Protein Homology	CDS	944686	945939	.	-	0	ID=cds946;Parent=gene977;Dbxref=Genbank:WP_082160430.1;Name=WP_082160430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220332.1;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_082160430.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	946060	946440	.	-	.	ID=gene978;Name=CleRt_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04555;old_locus_tag=CleRT_08880
NZ_CP011126.1	Protein Homology	CDS	946060	946440	.	-	0	ID=cds947;Parent=gene978;Dbxref=Genbank:WP_048875791.1;Name=WP_048875791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220500.1;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_048875791.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	946501	947970	.	-	.	ID=gene979;Name=CleRt_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04560;old_locus_tag=CleRT_08890
NZ_CP011126.1	Protein Homology	CDS	946501	947970	.	-	0	ID=cds948;Parent=gene979;Dbxref=Genbank:WP_048875256.1;Name=WP_048875256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569995.1;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_048875256.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	948004	950166	.	-	.	ID=gene980;Name=CleRt_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04565;old_locus_tag=CleRT_08900
NZ_CP011126.1	Protein Homology	CDS	948004	950166	.	-	0	ID=cds949;Parent=gene980;Dbxref=Genbank:WP_048875257.1;Name=WP_048875257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220501.1;product=ribonuclease R;protein_id=WP_048875257.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	950253	950478	.	+	.	ID=gene981;Name=CleRt_RS09090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09090;old_locus_tag=CleRT_08910;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	950253	950478	.	+	0	ID=cds950;Parent=gene981;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958003.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	950707	950973	.	-	.	ID=gene982;Name=CleRt_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04570
NZ_CP011126.1	GeneMarkS+	CDS	950707	950973	.	-	0	ID=cds951;Parent=gene982;Dbxref=Genbank:WP_048875258.1;Name=WP_048875258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875258.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	952363	952641	.	-	.	ID=gene983;Name=CleRt_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08365
NZ_CP011126.1	GeneMarkS+	CDS	952363	952641	.	-	0	ID=cds952;Parent=gene983;Dbxref=Genbank:WP_053097887.1;Name=WP_053097887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097887.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	953038	953115	.	+	.	ID=gene984;Name=CleRt_RS04580;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04580;old_locus_tag=CleRT_t030
NZ_CP011126.1	tRNAscan-SE	tRNA	953038	953115	.	+	.	ID=rna31;Parent=gene984;anticodon=(pos:953073..953075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	tRNAscan-SE	exon	953038	953115	.	+	.	ID=id32;Parent=rna31;anticodon=(pos:953073..953075);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	RefSeq	gene	953146	954531	.	+	.	ID=gene985;Name=CleRt_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04585;old_locus_tag=CleRT_08940
NZ_CP011126.1	Protein Homology	CDS	953146	954531	.	+	0	ID=cds953;Parent=gene985;Dbxref=Genbank:WP_048875259.1;Name=WP_048875259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014561583.1;product=class II fumarate hydratase;protein_id=WP_048875259.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	954538	955317	.	-	.	ID=gene986;Name=CleRt_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04590;old_locus_tag=CleRT_08950
NZ_CP011126.1	Protein Homology	CDS	954538	955317	.	-	0	ID=cds954;Parent=gene986;Dbxref=Genbank:WP_048875260.1;Name=WP_048875260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996965.1;product=signal peptidase I;protein_id=WP_048875260.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	955333	955752	.	-	.	ID=gene987;Name=CleRt_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04595;old_locus_tag=CleRT_08960
NZ_CP011126.1	Protein Homology	CDS	955333	955752	.	-	0	ID=cds955;Parent=gene987;Dbxref=Genbank:WP_048875261.1;Name=WP_048875261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996966.1;product=hypothetical protein;protein_id=WP_048875261.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	957041	957220	.	-	.	ID=gene988;Name=CleRt_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04605
NZ_CP011126.1	GeneMarkS+	CDS	957041	957220	.	-	0	ID=cds956;Parent=gene988;Dbxref=Genbank:WP_048875262.1;Name=WP_048875262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875262.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	957698	958012	.	-	.	ID=gene989;Name=CleRt_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04610;old_locus_tag=CleRT_08980
NZ_CP011126.1	GeneMarkS+	CDS	957698	958012	.	-	0	ID=cds957;Parent=gene989;Dbxref=Genbank:WP_048875263.1;Name=WP_048875263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875263.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	958523	959124	.	+	.	ID=gene990;Name=CleRt_RS04615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04615;old_locus_tag=CleRT_08990;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	958523	959124	.	+	0	ID=cds958;Parent=gene990;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770292.1;product=queuosine biosynthesis protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	959491	959619	.	+	.	ID=gene991;Name=CleRt_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09095
NZ_CP011126.1	Protein Homology	CDS	959491	959619	.	+	0	ID=cds959;Parent=gene991;Dbxref=Genbank:WP_082160502.1;Name=WP_082160502.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01227.20;product=hypothetical protein;protein_id=WP_082160502.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	959903	960145	.	+	.	ID=gene992;Name=CleRt_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04620;old_locus_tag=CleRT_09010
NZ_CP011126.1	Protein Homology	CDS	959903	960145	.	+	0	ID=cds960;Parent=gene992;Dbxref=Genbank:WP_048875264.1;Name=WP_048875264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768394.1;product=hypothetical protein;protein_id=WP_048875264.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	960142	961254	.	-	.	ID=gene993;Name=CleRt_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04625;old_locus_tag=CleRT_09020
NZ_CP011126.1	Protein Homology	CDS	960142	961254	.	-	0	ID=cds961;Parent=gene993;Dbxref=Genbank:WP_048875265.1;Name=WP_048875265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996974.1;product=alanine dehydrogenase;protein_id=WP_048875265.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	961269	962221	.	-	.	ID=gene994;Name=CleRt_RS04630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04630;old_locus_tag=CleRT_09030;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	961269	962221	.	-	0	ID=cds962;Parent=gene994;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768398.1;product=electron transfer flavoprotein subunit alpha;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	962260	962990	.	-	.	ID=gene995;Name=CleRt_RS04635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04635;old_locus_tag=CleRT_09040;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	962260	962990	.	-	0	ID=cds963;Parent=gene995;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005668874.1;product=electron transfer flavoprotein subunit beta;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	962987	963706	.	-	.	ID=gene996;Name=CleRt_RS04640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04640;old_locus_tag=CleRT_09050;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	962987	963706	.	-	0	ID=cds964;Parent=gene996;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220515.1;product=carboxymethylenebutenolidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	963857	965488	.	+	.	ID=gene997;Name=CleRt_RS04645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04645;old_locus_tag=CleRT_09060;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	963857	965488	.	+	0	ID=cds965;Parent=gene997;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768403.1;product=electron transfer flavoprotein-ubiquinone oxidoreductase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	965611	966561	.	+	.	ID=gene998;Name=CleRt_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04650;old_locus_tag=CleRT_09070
NZ_CP011126.1	Protein Homology	CDS	965611	966561	.	+	0	ID=cds966;Parent=gene998;Dbxref=Genbank:WP_048875266.1;Name=WP_048875266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768408.1;product=cytochrome c biogenesis protein;protein_id=WP_048875266.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	966558	966872	.	+	.	ID=gene999;Name=CleRt_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04655;old_locus_tag=CleRT_09080
NZ_CP011126.1	Protein Homology	CDS	966558	966872	.	+	0	ID=cds967;Parent=gene999;Dbxref=Genbank:WP_048875267.1;Name=WP_048875267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768409.1;product=chaperone modulatory protein CbpM;protein_id=WP_048875267.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	967885	968353	.	-	.	ID=gene1000;Name=CleRt_RS04660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04660;old_locus_tag=CleRT_09100;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	967885	968353	.	-	0	ID=cds968;Parent=gene1000;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569981.1;product=HPP family protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	968417	968782	.	-	.	ID=gene1001;Name=CleRt_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04665;old_locus_tag=CleRT_09110
NZ_CP011126.1	Protein Homology	CDS	968417	968782	.	-	0	ID=cds969;Parent=gene1001;Dbxref=Genbank:WP_048875268.1;Name=WP_048875268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768410.1;product=hypothetical protein;protein_id=WP_048875268.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	968791	969981	.	-	.	ID=gene1002;Name=CleRt_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04670;old_locus_tag=CleRT_09120
NZ_CP011126.1	Protein Homology	CDS	968791	969981	.	-	0	ID=cds970;Parent=gene1002;Dbxref=Genbank:WP_048875792.1;Name=WP_048875792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900428.1;product=IscS subfamily cysteine desulfurase;protein_id=WP_048875792.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	969981	972011	.	-	.	ID=gene1003;Name=CleRt_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04675;old_locus_tag=CleRT_09130
NZ_CP011126.1	Protein Homology	CDS	969981	972011	.	-	0	ID=cds971;Parent=gene1003;Dbxref=Genbank:WP_048875269.1;Name=WP_048875269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220521.1;product=oligopeptide transporter%2C OPT family;protein_id=WP_048875269.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	972060	972776	.	-	.	ID=gene1004;Name=CleRt_RS04680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04680;old_locus_tag=CleRT_09140;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	972060	972776	.	-	0	ID=cds972;Parent=gene1004;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996981.1;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	972944	973765	.	+	.	ID=gene1005;Name=CleRt_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04685;old_locus_tag=CleRT_09150
NZ_CP011126.1	Protein Homology	CDS	972944	973765	.	+	0	ID=cds973;Parent=gene1005;Dbxref=Genbank:WP_048875270.1;Name=WP_048875270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013031673.1;product=inositol monophosphatase;protein_id=WP_048875270.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	973746	976791	.	-	.	ID=gene1006;Name=CleRt_RS04690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04690;old_locus_tag=CleRT_09160;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	973746	976791	.	-	0	ID=cds974;Parent=gene1006;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569976.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	976822	977294	.	-	.	ID=gene1007;Name=CleRt_RS09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09100;old_locus_tag=CleRT_09170;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	976822	977294	.	-	0	ID=cds975;Parent=gene1007;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768423.1;product=enhanced entry protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	977349	978101	.	-	.	ID=gene1008;Name=CleRt_RS04700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04700;old_locus_tag=CleRT_09180;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	977349	978101	.	-	0	ID=cds976;Parent=gene1008;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996986.1;product=L%2CD-transpeptidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	978321	979235	.	-	.	ID=gene1009;Name=CleRt_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04705;old_locus_tag=CleRT_09190
NZ_CP011126.1	Protein Homology	CDS	978321	979235	.	-	0	ID=cds977;Parent=gene1009;Dbxref=Genbank:WP_048875793.1;Name=WP_048875793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569975.1;product=protein translocase subunit SecF;protein_id=WP_048875793.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	979235	981106	.	-	.	ID=gene1010;Name=CleRt_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04710;old_locus_tag=CleRT_09200
NZ_CP011126.1	Protein Homology	CDS	979235	981106	.	-	0	ID=cds978;Parent=gene1010;Dbxref=Genbank:WP_048875272.1;Name=WP_048875272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768438.1;product=protein translocase subunit SecD;protein_id=WP_048875272.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	981130	981483	.	-	.	ID=gene1011;Name=CleRt_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04715;old_locus_tag=CleRT_09210
NZ_CP011126.1	Protein Homology	CDS	981130	981483	.	-	0	ID=cds979;Parent=gene1011;Dbxref=Genbank:WP_048875273.1;Name=WP_048875273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958034.1;product=preprotein translocase subunit YajC;protein_id=WP_048875273.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	981639	982748	.	+	.	ID=gene1012;Name=CleRt_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04720;old_locus_tag=CleRT_09220
NZ_CP011126.1	Protein Homology	CDS	981639	982748	.	+	0	ID=cds980;Parent=gene1012;Dbxref=Genbank:WP_048875274.1;Name=WP_048875274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013784397.1;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_048875274.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	982812	983056	.	+	.	ID=gene1013;Name=CleRt_RS09105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09105;old_locus_tag=CleRT_09230;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	982812	983056	.	+	0	ID=cds981;Parent=gene1013;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019640808.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	983072	983365	.	+	.	ID=gene1014;Name=CleRt_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08370
NZ_CP011126.1	GeneMarkS+	CDS	983072	983365	.	+	0	ID=cds982;Parent=gene1014;Dbxref=Genbank:WP_053097888.1;Name=WP_053097888.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097888.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	983602	983820	.	+	.	ID=gene1015;Name=CleRt_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08375
NZ_CP011126.1	GeneMarkS+	CDS	983602	983820	.	+	0	ID=cds983;Parent=gene1015;Dbxref=Genbank:WP_053097890.1;Name=WP_053097890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097890.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	984043	984324	.	+	.	ID=gene1016;Name=CleRt_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08380
NZ_CP011126.1	GeneMarkS+	CDS	984043	984324	.	+	0	ID=cds984;Parent=gene1016;Dbxref=Genbank:WP_053097892.1;Name=WP_053097892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097892.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	985411	985515	.	+	.	ID=gene1017;Name=CleRt_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09110
NZ_CP011126.1	Protein Homology	CDS	985411	985515	.	+	0	ID=cds985;Parent=gene1017;Dbxref=Genbank:WP_082160503.1;Name=WP_082160503.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00218.19;product=hypothetical protein;protein_id=WP_082160503.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	986452	987545	.	+	.	ID=gene1018;Name=CleRt_RS04730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04730;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	986452	987545	.	+	0	ID=cds986;Parent=gene1018;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009873061.1;product=tryptophan synthase subunit beta;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	987532	988258	.	+	.	ID=gene1019;Name=CleRt_RS04735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04735;old_locus_tag=CleRT_09270;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	987532	988258	.	+	0	ID=cds987;Parent=gene1019;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768469.1;product=tryptophan synthase subunit alpha;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	988325	988965	.	-	.	ID=gene1020;Name=CleRt_RS04740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04740;old_locus_tag=CleRT_09280;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	988325	988965	.	-	0	ID=cds988;Parent=gene1020;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569967.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	989194	990546	.	+	.	ID=gene1021;Name=CleRt_RS09115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09115;old_locus_tag=CleRT_09290;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	989194	990546	.	+	0	ID=cds989;Parent=gene1021;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770662.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	990942	992073	.	+	.	ID=gene1022;Name=CleRt_RS09120;end_range=992073,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09120;old_locus_tag=CleRT_09300;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	990942	992073	.	+	0	ID=cds990;Parent=gene1022;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=992073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958046.1;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	992166	992621	.	-	.	ID=gene1023;Name=CleRt_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08385
NZ_CP011126.1	GeneMarkS+	CDS	992166	992621	.	-	0	ID=cds991;Parent=gene1023;Dbxref=Genbank:WP_053097894.1;Name=WP_053097894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097894.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	995523	996434	.	-	.	ID=gene1024;Name=CleRt_RS04750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04750;old_locus_tag=CleRT_09320;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	995523	996434	.	-	0	ID=cds992;Parent=gene1024;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570351.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	996784	996860	.	-	.	ID=gene1025;Name=CleRt_RS04755;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04755;old_locus_tag=CleRT_t031
NZ_CP011126.1	tRNAscan-SE	tRNA	996784	996860	.	-	.	ID=rna32;Parent=gene1025;anticodon=(pos:complement(996824..996826));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	tRNAscan-SE	exon	996784	996860	.	-	.	ID=id33;Parent=rna32;anticodon=(pos:complement(996824..996826));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	RefSeq	gene	997052	997510	.	+	.	ID=gene1026;Name=CleRt_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04760;old_locus_tag=CleRT_09330
NZ_CP011126.1	Protein Homology	CDS	997052	997510	.	+	0	ID=cds993;Parent=gene1026;Dbxref=Genbank:WP_048875275.1;Name=WP_048875275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770670.1;product=Hsp20/alpha crystallin family protein;protein_id=WP_048875275.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	997798	998235	.	-	.	ID=gene1027;Name=CleRt_RS04765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04765;old_locus_tag=CleRT_09340;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	997798	998235	.	-	0	ID=cds994;Parent=gene1027;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958049.1;product=secondary thiamine-phosphate synthase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	998232	999575	.	-	.	ID=gene1028;Name=CleRt_RS04770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04770;old_locus_tag=CleRT_09350;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	998232	999575	.	-	0	ID=cds995;Parent=gene1028;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770676.1;product=RNA-splicing ligase RtcB;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	999612	1000027	.	-	.	ID=gene1029;Name=CleRt_RS04775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04775;old_locus_tag=CleRT_09360;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	999612	1000027	.	-	0	ID=cds996;Parent=gene1029;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997005.1;product=archease;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1000212	1000634	.	-	.	ID=gene1030;Name=CleRt_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04780
NZ_CP011126.1	Protein Homology	CDS	1000212	1000634	.	-	0	ID=cds997;Parent=gene1030;Dbxref=Genbank:WP_082160431.1;Name=WP_082160431.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01327.19;product=hypothetical protein;protein_id=WP_082160431.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1000923	1001144	.	+	.	ID=gene1031;Name=CleRt_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04785
NZ_CP011126.1	GeneMarkS+	CDS	1000923	1001144	.	+	0	ID=cds998;Parent=gene1031;Dbxref=Genbank:WP_048875277.1;Name=WP_048875277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875277.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1002759	1003019	.	+	.	ID=gene1032;Name=CleRt_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04790
NZ_CP011126.1	GeneMarkS+	CDS	1002759	1003019	.	+	0	ID=cds999;Parent=gene1032;Dbxref=Genbank:WP_048875278.1;Name=WP_048875278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875278.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1004648	1004965	.	+	.	ID=gene1033;Name=CleRt_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04795;old_locus_tag=CleRT_09380
NZ_CP011126.1	GeneMarkS+	CDS	1004648	1004965	.	+	0	ID=cds1000;Parent=gene1033;Dbxref=Genbank:WP_048875279.1;Name=WP_048875279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875279.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1005065	1005340	.	+	.	ID=gene1034;Name=CleRt_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04800;old_locus_tag=CleRT_09390
NZ_CP011126.1	GeneMarkS+	CDS	1005065	1005340	.	+	0	ID=cds1001;Parent=gene1034;Dbxref=Genbank:WP_048875280.1;Name=WP_048875280.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875280.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1006423	1006659	.	+	.	ID=gene1035;Name=CleRt_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04805
NZ_CP011126.1	GeneMarkS+	CDS	1006423	1006659	.	+	0	ID=cds1002;Parent=gene1035;Dbxref=Genbank:WP_048875281.1;Name=WP_048875281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875281.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1007950	1009125	.	+	.	ID=gene1036;Name=CleRt_RS04810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04810;old_locus_tag=CleRT_09400;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1007950	1009125	.	+	0	ID=cds1003;Parent=gene1036;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770685.1;product=Bcr/CflA family drug resistance efflux transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1009211	1009543	.	-	.	ID=gene1037;Name=CleRt_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09125
NZ_CP011126.1	Protein Homology	CDS	1009211	1009543	.	-	0	ID=cds1004;Parent=gene1037;Dbxref=Genbank:WP_082160432.1;Name=WP_082160432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF02568.12;product=hypothetical protein;protein_id=WP_082160432.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1010022	1010210	.	-	.	ID=gene1038;Name=CleRt_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09130
NZ_CP011126.1	GeneMarkS+	CDS	1010022	1010210	.	-	0	ID=cds1005;Parent=gene1038;Dbxref=Genbank:WP_082160433.1;Name=WP_082160433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160433.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1010361	1011510	.	-	.	ID=gene1039;Name=CleRt_RS04820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04820;old_locus_tag=CleRT_09420;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1010361	1011510	.	-	0	ID=cds1006;Parent=gene1039;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770689.1;product=class V aminotransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1011732	1012049	.	+	.	ID=gene1040;Name=CleRt_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04825;old_locus_tag=CleRT_09430
NZ_CP011126.1	Protein Homology	CDS	1011732	1012049	.	+	0	ID=cds1007;Parent=gene1040;Dbxref=Genbank:WP_082160434.1;Name=WP_082160434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220542.1;product=RNA-binding protein;protein_id=WP_082160434.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1013080	1013298	.	-	.	ID=gene1041;Name=CleRt_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04830
NZ_CP011126.1	GeneMarkS+	CDS	1013080	1013298	.	-	0	ID=cds1008;Parent=gene1041;Dbxref=Genbank:WP_048875283.1;Name=WP_048875283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875283.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1013734	1013943	.	-	.	ID=gene1042;Name=CleRt_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04835
NZ_CP011126.1	GeneMarkS+	CDS	1013734	1013943	.	-	0	ID=cds1009;Parent=gene1042;Dbxref=Genbank:WP_048875284.1;Name=WP_048875284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875284.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1014003	1014182	.	-	.	ID=gene1043;Name=CleRt_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04840
NZ_CP011126.1	GeneMarkS+	CDS	1014003	1014182	.	-	0	ID=cds1010;Parent=gene1043;Dbxref=Genbank:WP_048875285.1;Name=WP_048875285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875285.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1014890	1015532	.	-	.	ID=gene1044;Name=CleRt_RS09135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09135;old_locus_tag=CleRT_09460;partial=true;pseudo=true;start_range=.,1014890
NZ_CP011126.1	Protein Homology	CDS	1014890	1015532	.	-	0	ID=cds1011;Parent=gene1044;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770694.1;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1014890;transl_table=11
NZ_CP011126.1	RefSeq	gene	1016211	1017647	.	+	.	ID=gene1045;Name=CleRt_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04855;old_locus_tag=CleRT_09470
NZ_CP011126.1	Protein Homology	CDS	1016211	1017647	.	+	0	ID=cds1012;Parent=gene1045;Dbxref=Genbank:WP_048875288.1;Name=WP_048875288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012978885.1;product=nicotinate phosphoribosyltransferase;protein_id=WP_048875288.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1017613	1018142	.	+	.	ID=gene1046;Name=CleRt_RS04860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04860;old_locus_tag=CleRT_09480;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1017613	1018142	.	+	0	ID=cds1013;Parent=gene1046;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014840919.1;product=nicotinamidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1019027	1019230	.	-	.	ID=gene1047;Name=CleRt_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08390
NZ_CP011126.1	GeneMarkS+	CDS	1019027	1019230	.	-	0	ID=cds1014;Parent=gene1047;Dbxref=Genbank:WP_053097895.1;Name=WP_053097895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097895.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1020529	1020605	.	-	.	ID=gene1048;Name=CleRt_RS04870;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04870;old_locus_tag=CleRT_t032
NZ_CP011126.1	tRNAscan-SE	tRNA	1020529	1020605	.	-	.	ID=rna33;Parent=gene1048;anticodon=(pos:complement(1020569..1020571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	tRNAscan-SE	exon	1020529	1020605	.	-	.	ID=id34;Parent=rna33;anticodon=(pos:complement(1020569..1020571));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Arg
NZ_CP011126.1	RefSeq	gene	1024057	1024353	.	+	.	ID=gene1049;Name=CleRt_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08395
NZ_CP011126.1	Protein Homology	CDS	1024057	1024353	.	+	0	ID=cds1015;Parent=gene1049;Dbxref=Genbank:WP_082160435.1;Name=WP_082160435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00873.17;product=hypothetical protein;protein_id=WP_082160435.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1024484	1024789	.	+	.	ID=gene1050;Name=CleRt_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04880;old_locus_tag=CleRT_09540
NZ_CP011126.1	GeneMarkS+	CDS	1024484	1024789	.	+	0	ID=cds1016;Parent=gene1050;Dbxref=Genbank:WP_048875289.1;Name=WP_048875289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875289.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1025476	1025715	.	+	.	ID=gene1051;Name=CleRt_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04885
NZ_CP011126.1	GeneMarkS+	CDS	1025476	1025715	.	+	0	ID=cds1017;Parent=gene1051;Dbxref=Genbank:WP_048875290.1;Name=WP_048875290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875290.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1026429	1026659	.	+	.	ID=gene1052;Name=CleRt_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04890
NZ_CP011126.1	GeneMarkS+	CDS	1026429	1026659	.	+	0	ID=cds1018;Parent=gene1052;Dbxref=Genbank:WP_048875291.1;Name=WP_048875291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875291.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1027474	1027809	.	-	.	ID=gene1053;Name=CleRt_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04895;old_locus_tag=CleRT_09560
NZ_CP011126.1	Protein Homology	CDS	1027474	1027809	.	-	0	ID=cds1019;Parent=gene1053;Dbxref=Genbank:WP_048875292.1;Name=WP_048875292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957966.1;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_048875292.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1027802	1028413	.	-	.	ID=gene1054;Name=CleRt_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04900;old_locus_tag=CleRT_09570
NZ_CP011126.1	Protein Homology	CDS	1027802	1028413	.	-	0	ID=cds1020;Parent=gene1054;Dbxref=Genbank:WP_048875293.1;Name=WP_048875293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016211348.1;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_048875293.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1028410	1030416	.	-	.	ID=gene1055;Name=CleRt_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04905;old_locus_tag=CleRT_09580
NZ_CP011126.1	Protein Homology	CDS	1028410	1030416	.	-	0	ID=cds1021;Parent=gene1055;Dbxref=Genbank:WP_048875294.1;Name=WP_048875294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570021.1;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_048875294.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1030438	1031340	.	-	.	ID=gene1056;Name=CleRt_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04910;old_locus_tag=CleRT_09590
NZ_CP011126.1	Protein Homology	CDS	1030438	1031340	.	-	0	ID=cds1022;Parent=gene1056;Dbxref=Genbank:WP_048875794.1;Name=WP_048875794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570020.1;product=cytochrome ubiquinol oxidase subunit II;protein_id=WP_048875794.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1031507	1031911	.	+	.	ID=gene1057;Name=CleRt_RS09140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09140;old_locus_tag=CleRT_09600;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1031507	1031911	.	+	0	ID=cds1023;Parent=gene1057;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768686.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1036268	1036495	.	-	.	ID=gene1058;Name=CleRt_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04915
NZ_CP011126.1	GeneMarkS+	CDS	1036268	1036495	.	-	0	ID=cds1024;Parent=gene1058;Dbxref=Genbank:WP_048875295.1;Name=WP_048875295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875295.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1037235	1037532	.	-	.	ID=gene1059;Name=CleRt_RS04920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04920;old_locus_tag=CleRT_09640;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1037235	1037532	.	-	0	ID=cds1025;Parent=gene1059;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957958.1;product=nucleotidyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1037525	1037933	.	-	.	ID=gene1060;Name=CleRt_RS09145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09145;old_locus_tag=CleRT_09650;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1037525	1037933	.	-	0	ID=cds1026;Parent=gene1060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768636.1;product=nucleotidyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1037952	1038039	.	-	.	ID=gene1061;Name=CleRt_RS04925;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04925;old_locus_tag=CleRT_t033
NZ_CP011126.1	tRNAscan-SE	tRNA	1037952	1038039	.	-	.	ID=rna34;Parent=gene1061;anticodon=(pos:complement(1038003..1038005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	tRNAscan-SE	exon	1037952	1038039	.	-	.	ID=id35;Parent=rna34;anticodon=(pos:complement(1038003..1038005));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	RefSeq	gene	1038079	1038149	.	-	.	ID=gene1062;Name=CleRt_RS04930;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS04930;old_locus_tag=CleRT_t034
NZ_CP011126.1	tRNAscan-SE	tRNA	1038079	1038149	.	-	.	ID=rna35;Parent=gene1062;anticodon=(pos:complement(1038115..1038117));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Cys
NZ_CP011126.1	tRNAscan-SE	exon	1038079	1038149	.	-	.	ID=id36;Parent=rna35;anticodon=(pos:complement(1038115..1038117));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Cys
NZ_CP011126.1	RefSeq	gene	1038201	1038422	.	-	.	ID=gene1063;Name=CleRt_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04935
NZ_CP011126.1	GeneMarkS+	CDS	1038201	1038422	.	-	0	ID=cds1027;Parent=gene1063;Dbxref=Genbank:WP_048875296.1;Name=WP_048875296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875296.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1041858	1042094	.	-	.	ID=gene1064;Name=CleRt_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04940
NZ_CP011126.1	GeneMarkS+	CDS	1041858	1042094	.	-	0	ID=cds1028;Parent=gene1064;Dbxref=Genbank:WP_048875297.1;Name=WP_048875297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875297.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1042225	1042407	.	-	.	ID=gene1065;Name=CleRt_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04945
NZ_CP011126.1	GeneMarkS+	CDS	1042225	1042407	.	-	0	ID=cds1029;Parent=gene1065;Dbxref=Genbank:WP_048875298.1;Name=WP_048875298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875298.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1043117	1043338	.	-	.	ID=gene1066;Name=CleRt_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04950
NZ_CP011126.1	GeneMarkS+	CDS	1043117	1043338	.	-	0	ID=cds1030;Parent=gene1066;Dbxref=Genbank:WP_048875299.1;Name=WP_048875299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875299.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1043920	1044195	.	-	.	ID=gene1067;Name=CleRt_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04955;old_locus_tag=CleRT_09680
NZ_CP011126.1	GeneMarkS+	CDS	1043920	1044195	.	-	0	ID=cds1031;Parent=gene1067;Dbxref=Genbank:WP_048875300.1;Name=WP_048875300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875300.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1045476	1046492	.	-	.	ID=gene1068;Name=CleRt_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04960;old_locus_tag=CleRT_09690
NZ_CP011126.1	Protein Homology	CDS	1045476	1046492	.	-	0	ID=cds1032;Parent=gene1068;Dbxref=Genbank:WP_048875795.1;Name=WP_048875795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768550.1;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_048875795.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1046489	1047209	.	-	.	ID=gene1069;Name=CleRt_RS04965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04965;old_locus_tag=CleRT_09700;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1046489	1047209	.	-	0	ID=cds1033;Parent=gene1069;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253218.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1047357	1048520	.	+	.	ID=gene1070;Name=CleRt_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04970;old_locus_tag=CleRT_09710
NZ_CP011126.1	Protein Homology	CDS	1047357	1048520	.	+	0	ID=cds1034;Parent=gene1070;Dbxref=Genbank:WP_048875301.1;Name=WP_048875301.1;Note=catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768554.1;product=isovaleryl-CoA dehydrogenase;protein_id=WP_048875301.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1048520	1049736	.	+	.	ID=gene1071;Name=CleRt_RS04975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04975;old_locus_tag=CleRT_09720;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1048520	1049736	.	+	0	ID=cds1035;Parent=gene1071;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996896.1;product=acetyl-CoA acetyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1049818	1051425	.	+	.	ID=gene1072;Name=CleRt_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04980;old_locus_tag=CleRT_09730
NZ_CP011126.1	Protein Homology	CDS	1049818	1051425	.	+	0	ID=cds1036;Parent=gene1072;Dbxref=Genbank:WP_048875302.1;Name=WP_048875302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011575689.1;product=methylcrotonoyl-CoA carboxylase;protein_id=WP_048875302.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1051442	1052209	.	+	.	ID=gene1073;Name=CleRt_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04985;old_locus_tag=CleRT_09740
NZ_CP011126.1	Protein Homology	CDS	1051442	1052209	.	+	0	ID=cds1037;Parent=gene1073;Dbxref=Genbank:WP_048875303.1;Name=WP_048875303.1;Note=Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772351.1;product=enoyl-CoA hydratase;protein_id=WP_048875303.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1052237	1054214	.	+	.	ID=gene1074;Name=CleRt_RS04990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS04990;old_locus_tag=CleRT_09750;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1052237	1054214	.	+	0	ID=cds1038;Parent=gene1074;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570047.1;product=biotin carboxylase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1055215	1056294	.	+	.	ID=gene1075;Name=CleRt_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS04995;old_locus_tag=CleRT_09780
NZ_CP011126.1	Protein Homology	CDS	1055215	1056294	.	+	0	ID=cds1039;Parent=gene1075;Dbxref=Genbank:WP_048875304.1;Name=WP_048875304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570043.1;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_048875304.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1056328	1056540	.	+	.	ID=gene1076;Name=CleRt_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05000
NZ_CP011126.1	Protein Homology	CDS	1056328	1056540	.	+	0	ID=cds1040;Parent=gene1076;Dbxref=Genbank:WP_082160436.1;Name=WP_082160436.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01817.19;product=hypothetical protein;protein_id=WP_082160436.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1056587	1057163	.	+	.	ID=gene1077;Name=CleRt_RS05005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05005;old_locus_tag=CleRT_09790;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1056587	1057163	.	+	0	ID=cds1041;Parent=gene1077;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768572.1;product=prephenate dehydratase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1058247	1058633	.	+	.	ID=gene1078;Name=CleRt_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09150
NZ_CP011126.1	GeneMarkS+	CDS	1058247	1058633	.	+	0	ID=cds1042;Parent=gene1078;Dbxref=Genbank:WP_082160437.1;Name=WP_082160437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160437.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1058683	1059438	.	-	.	ID=gene1079;Name=CleRt_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05015;old_locus_tag=CleRT_09820
NZ_CP011126.1	Protein Homology	CDS	1058683	1059438	.	-	0	ID=cds1043;Parent=gene1079;Dbxref=Genbank:WP_082160438.1;Name=WP_082160438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006990576.1;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_082160438.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1059538	1060368	.	+	.	ID=gene1080;Name=CleRt_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05020;old_locus_tag=CleRT_09830
NZ_CP011126.1	Protein Homology	CDS	1059538	1060368	.	+	0	ID=cds1044;Parent=gene1080;Dbxref=Genbank:WP_048875307.1;Name=WP_048875307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768576.1;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_048875307.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1060372	1061079	.	+	.	ID=gene1081;Name=CleRt_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05025;old_locus_tag=CleRT_09840
NZ_CP011126.1	Protein Homology	CDS	1060372	1061079	.	+	0	ID=cds1045;Parent=gene1081;Dbxref=Genbank:WP_082160439.1;Name=WP_082160439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570038.1;product=uracil-DNA glycosylase;protein_id=WP_082160439.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1061176	1061259	.	+	.	ID=gene1082;Name=CleRt_RS05030;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS05030;old_locus_tag=CleRT_t035
NZ_CP011126.1	tRNAscan-SE	tRNA	1061176	1061259	.	+	.	ID=rna36;Parent=gene1082;anticodon=(pos:1061210..1061212);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	tRNAscan-SE	exon	1061176	1061259	.	+	.	ID=id37;Parent=rna36;anticodon=(pos:1061210..1061212);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	RefSeq	gene	1061280	1061810	.	+	.	ID=gene1083;Name=CleRt_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05035;old_locus_tag=CleRT_09850
NZ_CP011126.1	Protein Homology	CDS	1061280	1061810	.	+	0	ID=cds1046;Parent=gene1083;Dbxref=Genbank:WP_048875309.1;Name=WP_048875309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957939.1;product=peptide deformylase;protein_id=WP_048875309.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1061810	1062721	.	+	.	ID=gene1084;Name=CleRt_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05040;old_locus_tag=CleRT_09860
NZ_CP011126.1	Protein Homology	CDS	1061810	1062721	.	+	0	ID=cds1047;Parent=gene1084;Dbxref=Genbank:WP_048875310.1;Name=WP_048875310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768584.1;product=protoheme IX farnesyltransferase;protein_id=WP_048875310.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1062773	1064107	.	-	.	ID=gene1085;Name=CleRt_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05045;old_locus_tag=CleRT_09870
NZ_CP011126.1	Protein Homology	CDS	1062773	1064107	.	-	0	ID=cds1048;Parent=gene1085;Dbxref=Genbank:WP_048875311.1;Name=WP_048875311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957943.1;product=adenylosuccinate synthase;protein_id=WP_048875311.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1064284	1064976	.	-	.	ID=gene1086;Name=CleRt_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05050;old_locus_tag=CleRT_09880
NZ_CP011126.1	Protein Homology	CDS	1064284	1064976	.	-	0	ID=cds1049;Parent=gene1086;Dbxref=Genbank:WP_048875312.1;Name=WP_048875312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768591.1;product=lipoprotein ABC transporter ATP-binding protein;protein_id=WP_048875312.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1064969	1066213	.	-	.	ID=gene1087;Name=CleRt_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05055;old_locus_tag=CleRT_09890
NZ_CP011126.1	Protein Homology	CDS	1064969	1066213	.	-	0	ID=cds1050;Parent=gene1087;Dbxref=Genbank:WP_048875313.1;Name=WP_048875313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768593.1;product=lipoprotein-releasing system transmembrane subunit LolC;protein_id=WP_048875313.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1066289	1067262	.	+	.	ID=gene1088;Name=CleRt_RS05060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05060;old_locus_tag=CleRT_09900;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1066289	1067262	.	+	0	ID=cds1051;Parent=gene1088;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768595.1;product=biotin--[acetyl-CoA-carboxylase] ligase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1067319	1068014	.	-	.	ID=gene1089;Name=CleRt_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05065;old_locus_tag=CleRT_09910
NZ_CP011126.1	Protein Homology	CDS	1067319	1068014	.	-	0	ID=cds1052;Parent=gene1089;Dbxref=Genbank:WP_048875796.1;Name=WP_048875796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957946.1;product=dethiobiotin synthase;protein_id=WP_048875796.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1068023	1068763	.	-	.	ID=gene1090;Name=CleRt_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05070;old_locus_tag=CleRT_09920
NZ_CP011126.1	Protein Homology	CDS	1068023	1068763	.	-	0	ID=cds1053;Parent=gene1090;Dbxref=Genbank:WP_048875314.1;Name=WP_048875314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957947.1;product=hypothetical protein;protein_id=WP_048875314.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1068756	1069463	.	-	.	ID=gene1091;Name=CleRt_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05075;old_locus_tag=CleRT_09930
NZ_CP011126.1	Protein Homology	CDS	1068756	1069463	.	-	0	ID=cds1054;Parent=gene1091;Dbxref=Genbank:WP_048875315.1;Name=WP_048875315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957948.1;product=carboxylesterase;protein_id=WP_048875315.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1069457	1070614	.	-	.	ID=gene1092;Name=CleRt_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05080;old_locus_tag=CleRT_09940
NZ_CP011126.1	Protein Homology	CDS	1069457	1070614	.	-	0	ID=cds1055;Parent=gene1092;Dbxref=Genbank:WP_048875316.1;Name=WP_048875316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768602.1;product=8-amino-7-oxononanoate synthase;protein_id=WP_048875316.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1070621	1071574	.	-	.	ID=gene1093;Name=CleRt_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05085;old_locus_tag=CleRT_09950
NZ_CP011126.1	Protein Homology	CDS	1070621	1071574	.	-	0	ID=cds1056;Parent=gene1093;Dbxref=Genbank:WP_048875317.1;Name=WP_048875317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768604.1;product=biotin synthase BioB;protein_id=WP_048875317.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1071662	1073002	.	+	.	ID=gene1094;Name=CleRt_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05090;old_locus_tag=CleRT_09960
NZ_CP011126.1	Protein Homology	CDS	1071662	1073002	.	+	0	ID=cds1057;Parent=gene1094;Dbxref=Genbank:WP_048875318.1;Name=WP_048875318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996884.1;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_048875318.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1073097	1073676	.	-	.	ID=gene1095;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=pseudogene;locus_tag=CleRt_RS05095;old_locus_tag=CleRT_09970;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1073097	1073676	.	-	0	ID=cds1058;Parent=gene1095;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system%3B frameshifted%3B internal stop;gbkey=CDS;gene=sirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768514.1;product=two-component system response regulator UvrY;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1076111	1076299	.	-	.	ID=gene1096;Name=CleRt_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09155
NZ_CP011126.1	Protein Homology	CDS	1076111	1076299	.	-	0	ID=cds1059;Parent=gene1096;Dbxref=Genbank:WP_082160440.1;Name=WP_082160440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03632.13;product=hypothetical protein;protein_id=WP_082160440.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1076715	1076909	.	-	.	ID=gene1097;Name=CleRt_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05100
NZ_CP011126.1	GeneMarkS+	CDS	1076715	1076909	.	-	0	ID=cds1060;Parent=gene1097;Dbxref=Genbank:WP_048875319.1;Name=WP_048875319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875319.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1077453	1077635	.	-	.	ID=gene1098;Name=CleRt_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05105
NZ_CP011126.1	Protein Homology	CDS	1077453	1077635	.	-	0	ID=cds1061;Parent=gene1098;Dbxref=Genbank:WP_048875320.1;Name=WP_048875320.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03636.13;product=hypothetical protein;protein_id=WP_048875320.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1078437	1078682	.	-	.	ID=gene1099;Name=CleRt_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05110
NZ_CP011126.1	GeneMarkS+	CDS	1078437	1078682	.	-	0	ID=cds1062;Parent=gene1099;Dbxref=Genbank:WP_048875321.1;Name=WP_048875321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875321.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1078809	1079132	.	-	.	ID=gene1100;Name=CleRt_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05115
NZ_CP011126.1	GeneMarkS+	CDS	1078809	1079132	.	-	0	ID=cds1063;Parent=gene1100;Dbxref=Genbank:WP_048875322.1;Name=WP_048875322.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875322.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1079693	1080381	.	-	.	ID=gene1101;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=pseudogene;locus_tag=CleRt_RS05120;old_locus_tag=CleRT_10000;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1079693	1080381	.	-	0	ID=cds1064;Parent=gene1101;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system%3B frameshifted%3B internal stop;gbkey=CDS;gene=sirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768514.1;product=two-component system response regulator UvrY;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1080903	1081166	.	+	.	ID=gene1102;Name=CleRt_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05125;old_locus_tag=CleRT_10010
NZ_CP011126.1	GeneMarkS+	CDS	1080903	1081166	.	+	0	ID=cds1065;Parent=gene1102;Dbxref=Genbank:WP_048875323.1;Name=WP_048875323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875323.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1081541	1081927	.	+	.	ID=gene1103;Name=CleRt_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05130;old_locus_tag=CleRT_10020
NZ_CP011126.1	GeneMarkS+	CDS	1081541	1081927	.	+	0	ID=cds1066;Parent=gene1103;Dbxref=Genbank:WP_048875324.1;Name=WP_048875324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875324.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1081920	1082126	.	-	.	ID=gene1104;Name=CleRt_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05135
NZ_CP011126.1	GeneMarkS+	CDS	1081920	1082126	.	-	0	ID=cds1067;Parent=gene1104;Dbxref=Genbank:WP_048875325.1;Name=WP_048875325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875325.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1087781	1088026	.	+	.	ID=gene1105;Name=CleRt_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05140
NZ_CP011126.1	GeneMarkS+	CDS	1087781	1088026	.	+	0	ID=cds1068;Parent=gene1105;Dbxref=Genbank:WP_048875326.1;Name=WP_048875326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875326.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1088990	1089082	.	-	.	ID=gene1106;Name=CleRt_RS05145;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS05145;old_locus_tag=CleRT_t036
NZ_CP011126.1	tRNAscan-SE	tRNA	1088990	1089082	.	-	.	ID=rna37;Parent=gene1106;anticodon=(pos:complement(1089045..1089047));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	tRNAscan-SE	exon	1088990	1089082	.	-	.	ID=id38;Parent=rna37;anticodon=(pos:complement(1089045..1089047));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ser
NZ_CP011126.1	RefSeq	gene	1089338	1089556	.	-	.	ID=gene1107;Name=CleRt_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05150;old_locus_tag=CleRT_10040
NZ_CP011126.1	Protein Homology	CDS	1089338	1089556	.	-	0	ID=cds1069;Parent=gene1107;Dbxref=Genbank:WP_048875327.1;Name=WP_048875327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768705.1;product=carbon storage regulator;protein_id=WP_048875327.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1089698	1090927	.	-	.	ID=gene1108;Name=CleRt_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05155;old_locus_tag=CleRT_10050
NZ_CP011126.1	Protein Homology	CDS	1089698	1090927	.	-	0	ID=cds1070;Parent=gene1108;Dbxref=Genbank:WP_048875328.1;Name=WP_048875328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957971.1;product=aspartate kinase;protein_id=WP_048875328.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1090974	1093592	.	-	.	ID=gene1109;Name=CleRt_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05160;old_locus_tag=CleRT_10060
NZ_CP011126.1	Protein Homology	CDS	1090974	1093592	.	-	0	ID=cds1071;Parent=gene1109;Dbxref=Genbank:WP_048875329.1;Name=WP_048875329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220353.1;product=alanine--tRNA ligase;protein_id=WP_048875329.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1093589	1094038	.	-	.	ID=gene1110;Name=CleRt_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05165;old_locus_tag=CleRT_10070
NZ_CP011126.1	Protein Homology	CDS	1093589	1094038	.	-	0	ID=cds1072;Parent=gene1110;Dbxref=Genbank:WP_048875330.1;Name=WP_048875330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957973.1;product=regulatory protein RecX;protein_id=WP_048875330.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1094035	1095069	.	-	.	ID=gene1111;Name=CleRt_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05170;old_locus_tag=CleRT_10080
NZ_CP011126.1	Protein Homology	CDS	1094035	1095069	.	-	0	ID=cds1073;Parent=gene1111;Dbxref=Genbank:WP_048875331.1;Name=WP_048875331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005958888.1;product=recombinase RecA;protein_id=WP_048875331.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1095184	1095672	.	-	.	ID=gene1112;Name=CleRt_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05175;old_locus_tag=CleRT_10090
NZ_CP011126.1	Protein Homology	CDS	1095184	1095672	.	-	0	ID=cds1074;Parent=gene1112;Dbxref=Genbank:WP_048875332.1;Name=WP_048875332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768715.1;product=CinA family protein;protein_id=WP_048875332.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1095766	1098342	.	+	.	ID=gene1113;Name=CleRt_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05180;old_locus_tag=CleRT_10100
NZ_CP011126.1	Protein Homology	CDS	1095766	1098342	.	+	0	ID=cds1075;Parent=gene1113;Dbxref=Genbank:WP_048875333.1;Name=WP_048875333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768717.1;product=DNA mismatch repair protein MutS;protein_id=WP_048875333.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1098339	1099096	.	+	.	ID=gene1114;Name=CleRt_RS05185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05185;old_locus_tag=CleRT_10110;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1098339	1099096	.	+	0	ID=cds1076;Parent=gene1114;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957975.1;product=glycosyl transferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1099243	1099752	.	+	.	ID=gene1115;Name=CleRt_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05190
NZ_CP011126.1	Protein Homology	CDS	1099243	1099752	.	+	0	ID=cds1077;Parent=gene1115;Dbxref=Genbank:WP_048875334.1;Name=WP_048875334.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00854.19;product=MFS transporter;protein_id=WP_048875334.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1099715	1100071	.	+	.	ID=gene1116;Name=CleRt_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05195
NZ_CP011126.1	Protein Homology	CDS	1099715	1100071	.	+	0	ID=cds1078;Parent=gene1116;Dbxref=Genbank:WP_048875335.1;Name=WP_048875335.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00854.19;product=hypothetical protein;protein_id=WP_048875335.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1100185	1100694	.	+	.	ID=gene1117;Name=CleRt_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05200
NZ_CP011126.1	Protein Homology	CDS	1100185	1100694	.	+	0	ID=cds1079;Parent=gene1117;Dbxref=Genbank:WP_082160441.1;Name=WP_082160441.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00854.19;product=hypothetical protein;protein_id=WP_082160441.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1100733	1101992	.	+	.	ID=gene1118;Name=CleRt_RS05205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05205;old_locus_tag=CleRT_10130;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1100733	1101992	.	+	0	ID=cds1080;Parent=gene1118;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220351.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1101963	1102697	.	-	.	ID=gene1119;Name=CleRt_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05210;old_locus_tag=CleRT_10140
NZ_CP011126.1	Protein Homology	CDS	1101963	1102697	.	-	0	ID=cds1081;Parent=gene1119;Dbxref=Genbank:WP_048875337.1;Name=WP_048875337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957977.1;product=23S rRNA pseudouridylate synthase B;protein_id=WP_048875337.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1102703	1103350	.	-	.	ID=gene1120;Name=CleRt_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05215;old_locus_tag=CleRT_10150
NZ_CP011126.1	Protein Homology	CDS	1102703	1103350	.	-	0	ID=cds1082;Parent=gene1120;Dbxref=Genbank:WP_048875338.1;Name=WP_048875338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570013.1;product=SMC-Scp complex subunit ScpB;protein_id=WP_048875338.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1103356	1104153	.	-	.	ID=gene1121;Name=CleRt_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05220;old_locus_tag=CleRT_10160
NZ_CP011126.1	Protein Homology	CDS	1103356	1104153	.	-	0	ID=cds1083;Parent=gene1121;Dbxref=Genbank:WP_048875339.1;Name=WP_048875339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_040933466.1;product=segregation/condensation protein A;protein_id=WP_048875339.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1105130	1105741	.	-	.	ID=gene1122;Name=CleRt_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05225;old_locus_tag=CleRT_10180
NZ_CP011126.1	Protein Homology	CDS	1105130	1105741	.	-	0	ID=cds1084;Parent=gene1122;Dbxref=Genbank:WP_048875340.1;Name=WP_048875340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570087.1;product=threonylcarbamoyl-AMP synthase;protein_id=WP_048875340.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1105796	1106340	.	+	.	ID=gene1123;Name=CleRt_RS05230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05230;old_locus_tag=CleRT_10190;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1105796	1106340	.	+	0	ID=cds1085;Parent=gene1123;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768731.1;product=septation protein A;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1106343	1106642	.	+	.	ID=gene1124;Name=CleRt_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05235
NZ_CP011126.1	Protein Homology	CDS	1106343	1106642	.	+	0	ID=cds1086;Parent=gene1124;Dbxref=Genbank:WP_048875341.1;Name=WP_048875341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005964652.1;product=BolA family transcriptional regulator;protein_id=WP_048875341.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1106654	1106923	.	+	.	ID=gene1125;Name=CleRt_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05240
NZ_CP011126.1	Protein Homology	CDS	1106654	1106923	.	+	0	ID=cds1087;Parent=gene1125;Dbxref=Genbank:WP_048875342.1;Name=WP_048875342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015006199.1;product=BolA family transcriptional regulator;protein_id=WP_048875342.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1106905	1108250	.	-	.	ID=gene1126;Name=CleRt_RS05245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05245;old_locus_tag=CleRT_10210;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1106905	1108250	.	-	0	ID=cds1088;Parent=gene1126;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957878.1;product=MFS transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1108395	1108628	.	+	.	ID=gene1127;Name=CleRt_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05250;old_locus_tag=CleRT_10220
NZ_CP011126.1	Protein Homology	CDS	1108395	1108628	.	+	0	ID=cds1089;Parent=gene1127;Dbxref=Genbank:WP_048875343.1;Name=WP_048875343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768737.1;product=50S ribosomal protein L31;protein_id=WP_048875343.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1108700	1109505	.	-	.	ID=gene1128;Name=CleRt_RS05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05255;old_locus_tag=CleRT_10230;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1108700	1109505	.	-	0	ID=cds1090;Parent=gene1128;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220418.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1109584	1110035	.	-	.	ID=gene1129;Name=CleRt_RS05260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05260;old_locus_tag=CleRT_10240;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1109584	1110035	.	-	0	ID=cds1091;Parent=gene1129;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768749.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1110047	1110379	.	-	.	ID=gene1130;Name=CleRt_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05265;old_locus_tag=CleRT_10250
NZ_CP011126.1	Protein Homology	CDS	1110047	1110379	.	-	0	ID=cds1092;Parent=gene1130;Dbxref=Genbank:WP_048875344.1;Name=WP_048875344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996853.1;product=hypothetical protein;protein_id=WP_048875344.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1110390	1111875	.	-	.	ID=gene1131;Name=CleRt_RS05270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05270;old_locus_tag=CleRT_10260;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1110390	1111875	.	-	0	ID=cds1093;Parent=gene1131;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005369122.1;product=amidophosphoribosyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1111882	1112430	.	-	.	ID=gene1132;Name=CleRt_RS05275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05275;old_locus_tag=CleRT_10270;partial=true;pseudo=true;start_range=.,1111882
NZ_CP011126.1	Protein Homology	CDS	1111882	1112430	.	-	0	ID=cds1094;Parent=gene1132;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768755.1;partial=true;product=colicin V synthesis protein;pseudo=true;start_range=.,1111882;transl_table=11
NZ_CP011126.1	RefSeq	gene	1112461	1112988	.	-	.	ID=gene1133;Name=CleRt_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05280;old_locus_tag=CleRT_10280
NZ_CP011126.1	Protein Homology	CDS	1112461	1112988	.	-	0	ID=cds1095;Parent=gene1133;Dbxref=Genbank:WP_082160504.1;Name=WP_082160504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768757.1;product=hypothetical protein;protein_id=WP_082160504.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1113170	1114408	.	-	.	ID=gene1134;Name=CleRt_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05285;old_locus_tag=CleRT_10290
NZ_CP011126.1	Protein Homology	CDS	1113170	1114408	.	-	0	ID=cds1096;Parent=gene1134;Dbxref=Genbank:WP_048875798.1;Name=WP_048875798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957872.1;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_048875798.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1114519	1115394	.	-	.	ID=gene1135;Name=CleRt_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05290;old_locus_tag=CleRT_10300
NZ_CP011126.1	Protein Homology	CDS	1114519	1115394	.	-	0	ID=cds1097;Parent=gene1135;Dbxref=Genbank:WP_048875346.1;Name=WP_048875346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768761.1;product=acetyl-CoA carboxylase carboxyltransferase subunit beta;protein_id=WP_048875346.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1115411	1116199	.	-	.	ID=gene1136;Name=CleRt_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05295;old_locus_tag=CleRT_10310
NZ_CP011126.1	Protein Homology	CDS	1115411	1116199	.	-	0	ID=cds1098;Parent=gene1136;Dbxref=Genbank:WP_048875347.1;Name=WP_048875347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768766.1;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_048875347.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1116204	1117151	.	-	.	ID=gene1137;Name=CleRt_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05300;old_locus_tag=CleRT_10320
NZ_CP011126.1	Protein Homology	CDS	1116204	1117151	.	-	0	ID=cds1099;Parent=gene1137;Dbxref=Genbank:WP_048875348.1;Name=WP_048875348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772332.1;product=hypothetical protein;protein_id=WP_048875348.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1117624	1118210	.	+	.	ID=gene1138;Name=CleRt_RS05305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05305;old_locus_tag=CleRT_10340;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1117624	1118210	.	+	0	ID=cds1100;Parent=gene1138;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957869.1;product=dihydromonapterin reductase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1118617	1119819	.	-	.	ID=gene1139;Name=CleRt_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05310;old_locus_tag=CleRT_10360
NZ_CP011126.1	Protein Homology	CDS	1118617	1119819	.	-	0	ID=cds1101;Parent=gene1139;Dbxref=Genbank:WP_048875349.1;Name=WP_048875349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220427.1;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_048875349.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1120060	1120254	.	-	.	ID=gene1140;Name=CleRt_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05315
NZ_CP011126.1	GeneMarkS+	CDS	1120060	1120254	.	-	0	ID=cds1102;Parent=gene1140;Dbxref=Genbank:WP_048875350.1;Name=WP_048875350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875350.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1120974	1121207	.	-	.	ID=gene1141;Name=CleRt_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05320
NZ_CP011126.1	GeneMarkS+	CDS	1120974	1121207	.	-	0	ID=cds1103;Parent=gene1141;Dbxref=Genbank:WP_048875351.1;Name=WP_048875351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875351.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1121414	1123244	.	-	.	ID=gene1142;Name=CleRt_RS05325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05325;old_locus_tag=CleRT_10370;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1121414	1123244	.	-	0	ID=cds1104;Parent=gene1142;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996846.1;product=GTP-binding protein TypA;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1123347	1124393	.	-	.	ID=gene1143;Name=CleRt_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05330;old_locus_tag=CleRT_10380
NZ_CP011126.1	Protein Homology	CDS	1123347	1124393	.	-	0	ID=cds1105;Parent=gene1143;Dbxref=Genbank:WP_048875352.1;Name=WP_048875352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768800.1;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_048875352.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1124413	1125471	.	-	.	ID=gene1144;Name=CleRt_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05335;old_locus_tag=CleRT_10390
NZ_CP011126.1	Protein Homology	CDS	1124413	1125471	.	-	0	ID=cds1106;Parent=gene1144;Dbxref=Genbank:WP_048875353.1;Name=WP_048875353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005961306.1;product=chorismate synthase;protein_id=WP_048875353.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1125615	1126139	.	+	.	ID=gene1145;Name=CleRt_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05340;old_locus_tag=CleRT_10400
NZ_CP011126.1	Protein Homology	CDS	1125615	1126139	.	+	0	ID=cds1107;Parent=gene1145;Dbxref=Genbank:WP_048875354.1;Name=WP_048875354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220435.1;product=DNA mismatch repair protein MutS;protein_id=WP_048875354.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1126150	1126719	.	+	.	ID=gene1146;Name=CleRt_RS05345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05345;old_locus_tag=CleRT_10410;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1126150	1126719	.	+	0	ID=cds1108;Parent=gene1146;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010653302.1;product=uridine kinase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1126911	1127399	.	+	.	ID=gene1147;Name=CleRt_RS05350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05350;old_locus_tag=CleRT_10420;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1126911	1127399	.	+	0	ID=cds1109;Parent=gene1147;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768809.1;product=deacylase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1127376	1127615	.	-	.	ID=gene1148;Name=CleRt_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05355;old_locus_tag=CleRT_10430
NZ_CP011126.1	Protein Homology	CDS	1127376	1127615	.	-	0	ID=cds1110;Parent=gene1148;Dbxref=Genbank:WP_048875355.1;Name=WP_048875355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768810.1;product=succinate dehydrogenase assembly factor 2;protein_id=WP_048875355.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1127617	1128690	.	-	.	ID=gene1149;Name=CleRt_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05360;old_locus_tag=CleRT_10440
NZ_CP011126.1	Protein Homology	CDS	1127617	1128690	.	-	0	ID=cds1111;Parent=gene1149;Dbxref=Genbank:WP_048875356.1;Name=WP_048875356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768812.1;product=alanine racemase;protein_id=WP_048875356.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1128687	1130075	.	-	.	ID=gene1150;Name=CleRt_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05365;old_locus_tag=CleRT_10450
NZ_CP011126.1	Protein Homology	CDS	1128687	1130075	.	-	0	ID=cds1112;Parent=gene1150;Dbxref=Genbank:WP_048875357.1;Name=WP_048875357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252821.1;product=replicative DNA helicase;protein_id=WP_048875357.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1130713	1131159	.	-	.	ID=gene1151;Name=CleRt_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05370;old_locus_tag=CleRT_10460
NZ_CP011126.1	Protein Homology	CDS	1130713	1131159	.	-	0	ID=cds1113;Parent=gene1151;Dbxref=Genbank:WP_048875799.1;Name=WP_048875799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007154916.1;product=50S ribosomal protein L9;protein_id=WP_048875799.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1131180	1132079	.	-	.	ID=gene1152;Name=CleRt_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05375;old_locus_tag=CleRT_10470
NZ_CP011126.1	Protein Homology	CDS	1131180	1132079	.	-	0	ID=cds1114;Parent=gene1152;Dbxref=Genbank:WP_048875800.1;Name=WP_048875800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957858.1;product=membrane protein;protein_id=WP_048875800.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1132144	1132365	.	-	.	ID=gene1153;Name=CleRt_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05380;old_locus_tag=CleRT_10480
NZ_CP011126.1	Protein Homology	CDS	1132144	1132365	.	-	0	ID=cds1115;Parent=gene1153;Dbxref=Genbank:WP_048875358.1;Name=WP_048875358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768821.1;product=30S ribosomal protein S18;protein_id=WP_048875358.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1132376	1132768	.	-	.	ID=gene1154;Name=CleRt_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05385;old_locus_tag=CleRT_10490
NZ_CP011126.1	Protein Homology	CDS	1132376	1132768	.	-	0	ID=cds1116;Parent=gene1154;Dbxref=Genbank:WP_048875359.1;Name=WP_048875359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772317.1;product=30S ribosomal protein S6;protein_id=WP_048875359.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1132822	1133013	.	+	.	ID=gene1155;Name=CleRt_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05390
NZ_CP011126.1	GeneMarkS+	CDS	1132822	1133013	.	+	0	ID=cds1117;Parent=gene1155;Dbxref=Genbank:WP_048875360.1;Name=WP_048875360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875360.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1133000	1133380	.	+	.	ID=gene1156;Name=CleRt_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05395;old_locus_tag=CleRT_10500
NZ_CP011126.1	Protein Homology	CDS	1133000	1133380	.	+	0	ID=cds1118;Parent=gene1156;Dbxref=Genbank:WP_048875361.1;Name=WP_048875361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996831.1;product=membrane protein;protein_id=WP_048875361.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1133377	1135008	.	+	.	ID=gene1157;Name=CleRt_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05400;old_locus_tag=CleRT_10510
NZ_CP011126.1	Protein Homology	CDS	1133377	1135008	.	+	0	ID=cds1119;Parent=gene1157;Dbxref=Genbank:WP_048875362.1;Name=WP_048875362.1;Note=NH(3)-dependent%3B catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996830.1;product=NAD+ synthase;protein_id=WP_048875362.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1134980	1135957	.	-	.	ID=gene1158;Name=CleRt_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05405;old_locus_tag=CleRT_10520
NZ_CP011126.1	Protein Homology	CDS	1134980	1135957	.	-	0	ID=cds1120;Parent=gene1158;Dbxref=Genbank:WP_048875363.1;Name=WP_048875363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957852.1;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_048875363.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1135957	1137726	.	-	.	ID=gene1159;Name=CleRt_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05410;old_locus_tag=CleRT_10530
NZ_CP011126.1	Protein Homology	CDS	1135957	1137726	.	-	0	ID=cds1121;Parent=gene1159;Dbxref=Genbank:WP_048875364.1;Name=WP_048875364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_040948128.1;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_048875364.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1139238	1139336	.	-	.	ID=gene1160;Name=CleRt_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09160
NZ_CP011126.1	Protein Homology	CDS	1139238	1139336	.	-	0	ID=cds1122;Parent=gene1160;Dbxref=Genbank:WP_082160505.1;Name=WP_082160505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03772.14;product=hypothetical protein;protein_id=WP_082160505.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1139364	1139711	.	-	.	ID=gene1161;Name=CleRt_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05415
NZ_CP011126.1	Protein Homology	CDS	1139364	1139711	.	-	0	ID=cds1123;Parent=gene1161;Dbxref=Genbank:WP_082160442.1;Name=WP_082160442.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13567.4;product=DUF4131 domain-containing protein;protein_id=WP_082160442.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1139724	1140030	.	-	.	ID=gene1162;Name=CleRt_RS09165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09165;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1139724	1140030	.	-	0	ID=cds1124;Parent=gene1162;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768837.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1141089	1141358	.	-	.	ID=gene1163;Name=CleRt_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05420;old_locus_tag=CleRT_10550
NZ_CP011126.1	GeneMarkS+	CDS	1141089	1141358	.	-	0	ID=cds1125;Parent=gene1163;Dbxref=Genbank:WP_048875366.1;Name=WP_048875366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875366.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1141515	1141953	.	+	.	ID=gene1164;Name=CleRt_RS09170;end_range=1141953,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09170;old_locus_tag=CleRT_10560;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1141515	1141953	.	+	0	ID=cds1126;Parent=gene1164;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=1141953,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220445.1;partial=true;product=methylglyoxal synthase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1141938	1144055	.	-	.	ID=gene1165;Name=CleRt_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05425;old_locus_tag=CleRT_10570
NZ_CP011126.1	Protein Homology	CDS	1141938	1144055	.	-	0	ID=cds1127;Parent=gene1165;Dbxref=Genbank:WP_048875367.1;Name=WP_048875367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008932040.1;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_048875367.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1144069	1144338	.	-	.	ID=gene1166;Name=CleRt_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05430;old_locus_tag=CleRT_10580
NZ_CP011126.1	Protein Homology	CDS	1144069	1144338	.	-	0	ID=cds1128;Parent=gene1166;Dbxref=Genbank:WP_048875368.1;Name=WP_048875368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768842.1;product=30S ribosomal protein S15;protein_id=WP_048875368.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1145486	1146367	.	-	.	ID=gene1167;Name=CleRt_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05435;old_locus_tag=CleRT_10600
NZ_CP011126.1	Protein Homology	CDS	1145486	1146367	.	-	0	ID=cds1129;Parent=gene1167;Dbxref=Genbank:WP_048875369.1;Name=WP_048875369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772523.1;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=WP_048875369.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1146364	1148022	.	-	.	ID=gene1168;Name=CleRt_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05440;old_locus_tag=CleRT_10610
NZ_CP011126.1	Protein Homology	CDS	1146364	1148022	.	-	0	ID=cds1130;Parent=gene1168;Dbxref=Genbank:WP_048875370.1;Name=WP_048875370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957846.1;product=glucose-6-phosphate isomerase;protein_id=WP_048875370.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1148438	1148932	.	-	.	ID=gene1169;Name=CleRt_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05445
NZ_CP011126.1	Protein Homology	CDS	1148438	1148932	.	-	0	ID=cds1131;Parent=gene1169;Dbxref=Genbank:WP_048875371.1;Name=WP_048875371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00483.21;product=hypothetical protein;protein_id=WP_048875371.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1148953	1149699	.	-	.	ID=gene1170;Name=CleRt_RS05450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05450;old_locus_tag=CleRT_10630;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1148953	1149699	.	-	0	ID=cds1132;Parent=gene1170;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957845.1;product=3-hydroxyacyl-CoA dehydrogenase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1149727	1151082	.	-	.	ID=gene1171;Name=CleRt_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05455;old_locus_tag=CleRT_10640
NZ_CP011126.1	Protein Homology	CDS	1149727	1151082	.	-	0	ID=cds1133;Parent=gene1171;Dbxref=Genbank:WP_048875372.1;Name=WP_048875372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957844.1;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_048875372.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1151142	1152431	.	+	.	ID=gene1172;Name=CleRt_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05460;old_locus_tag=CleRT_10650
NZ_CP011126.1	Protein Homology	CDS	1151142	1152431	.	+	0	ID=cds1134;Parent=gene1172;Dbxref=Genbank:WP_048875373.1;Name=WP_048875373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768856.1;product=nucleotide sugar dehydrogenase;protein_id=WP_048875373.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1152432	1153439	.	+	.	ID=gene1173;Name=CleRt_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05465;old_locus_tag=CleRT_10660
NZ_CP011126.1	Protein Homology	CDS	1152432	1153439	.	+	0	ID=cds1135;Parent=gene1173;Dbxref=Genbank:WP_048875374.1;Name=WP_048875374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004582563.1;product=NAD-dependent epimerase;protein_id=WP_048875374.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1153396	1154547	.	-	.	ID=gene1174;Name=CleRt_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05470;old_locus_tag=CleRT_10670
NZ_CP011126.1	Protein Homology	CDS	1153396	1154547	.	-	0	ID=cds1136;Parent=gene1174;Dbxref=Genbank:WP_048875801.1;Name=WP_048875801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768863.1;product=glycosyltransferase family 1 protein;protein_id=WP_048875801.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1154544	1156454	.	-	.	ID=gene1175;Name=CleRt_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05475;old_locus_tag=CleRT_10680
NZ_CP011126.1	Protein Homology	CDS	1154544	1156454	.	-	0	ID=cds1137;Parent=gene1175;Dbxref=Genbank:WP_048875375.1;Name=WP_048875375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020592919.1;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_048875375.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1156456	1157664	.	-	.	ID=gene1176;Name=CleRt_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05480;old_locus_tag=CleRT_10690
NZ_CP011126.1	Protein Homology	CDS	1156456	1157664	.	-	0	ID=cds1138;Parent=gene1176;Dbxref=Genbank:WP_082160506.1;Name=WP_082160506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768867.1;product=glycosyl transferase;protein_id=WP_082160506.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1157805	1158920	.	-	.	ID=gene1177;Name=CleRt_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05485;old_locus_tag=CleRT_10700
NZ_CP011126.1	Protein Homology	CDS	1157805	1158920	.	-	0	ID=cds1139;Parent=gene1177;Dbxref=Genbank:WP_048875376.1;Name=WP_048875376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768870.1;product=glycosyltransferase family 4 protein;protein_id=WP_048875376.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1158941	1160631	.	-	.	ID=gene1178;Name=CleRt_RS09175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09175;old_locus_tag=CleRT_10710;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1158941	1160631	.	-	0	ID=cds1140;Parent=gene1178;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570128.1;product=ABC transporter permease;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1160628	1161818	.	-	.	ID=gene1179;Name=CleRt_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05490;old_locus_tag=CleRT_10720
NZ_CP011126.1	Protein Homology	CDS	1160628	1161818	.	-	0	ID=cds1141;Parent=gene1179;Dbxref=Genbank:WP_048875377.1;Name=WP_048875377.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13524.4;product=glycosyltransferase family 1 protein;protein_id=WP_048875377.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1161825	1162895	.	-	.	ID=gene1180;Name=CleRt_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05495;old_locus_tag=CleRT_10730
NZ_CP011126.1	Protein Homology	CDS	1161825	1162895	.	-	0	ID=cds1142;Parent=gene1180;Dbxref=Genbank:WP_048875378.1;Name=WP_048875378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009737023.1;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_048875378.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1162914	1164004	.	-	.	ID=gene1181;Name=CleRt_RS05500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05500;old_locus_tag=CleRT_10740;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1162914	1164004	.	-	0	ID=cds1143;Parent=gene1181;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003818384.1;product=nucleotide sugar epimerase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1164007	1164951	.	-	.	ID=gene1182;Name=CleRt_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05505;old_locus_tag=CleRT_10750
NZ_CP011126.1	Protein Homology	CDS	1164007	1164951	.	-	0	ID=cds1144;Parent=gene1182;Dbxref=Genbank:WP_048875379.1;Name=WP_048875379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003807090.1;product=nucleotide sugar epimerase;protein_id=WP_048875379.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1164981	1166927	.	-	.	ID=gene1183;Name=CleRt_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05510;old_locus_tag=CleRT_10760
NZ_CP011126.1	Protein Homology	CDS	1164981	1166927	.	-	0	ID=cds1145;Parent=gene1183;Dbxref=Genbank:WP_048875380.1;Name=WP_048875380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006340632.1;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_048875380.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1166928	1168535	.	-	.	ID=gene1184;Name=CleRt_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05515;old_locus_tag=CleRT_10770
NZ_CP011126.1	Protein Homology	CDS	1166928	1168535	.	-	0	ID=cds1146;Parent=gene1184;Dbxref=Genbank:WP_048875381.1;Name=WP_048875381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304061.1;product=oxidoreductase;protein_id=WP_048875381.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1168697	1169794	.	-	.	ID=gene1185;Name=CleRt_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05520;old_locus_tag=CleRT_10780
NZ_CP011126.1	Protein Homology	CDS	1168697	1169794	.	-	0	ID=cds1147;Parent=gene1185;Dbxref=Genbank:WP_048875382.1;Name=WP_048875382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768894.1;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_048875382.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1169781	1169972	.	-	.	ID=gene1186;Name=CleRt_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05525
NZ_CP011126.1	GeneMarkS+	CDS	1169781	1169972	.	-	0	ID=cds1148;Parent=gene1186;Dbxref=Genbank:WP_048875383.1;Name=WP_048875383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875383.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1170038	1171423	.	+	.	ID=gene1187;Name=CleRt_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05530;old_locus_tag=CleRT_10790
NZ_CP011126.1	Protein Homology	CDS	1170038	1171423	.	+	0	ID=cds1149;Parent=gene1187;Dbxref=Genbank:WP_048875384.1;Name=WP_048875384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957828.1;product=adenylosuccinate lyase;protein_id=WP_048875384.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1171447	1173200	.	+	.	ID=gene1188;Name=CleRt_RS05535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05535;old_locus_tag=CleRT_10800;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1171447	1173200	.	+	0	ID=cds1150;Parent=gene1188;Note=malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996809.1;product=NAD-dependent malic enzyme;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1177430	1178576	.	-	.	ID=gene1189;Name=CleRt_RS05540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05540;old_locus_tag=CleRT_10830;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1177430	1178576	.	-	0	ID=cds1151;Parent=gene1189;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957821.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1178647	1180224	.	-	.	ID=gene1190;Name=CleRt_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05545;old_locus_tag=CleRT_10840
NZ_CP011126.1	Protein Homology	CDS	1178647	1180224	.	-	0	ID=cds1152;Parent=gene1190;Dbxref=Genbank:WP_082160443.1;Name=WP_082160443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772589.1;product=peptide chain release factor 3;protein_id=WP_082160443.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1180261	1181325	.	-	.	ID=gene1191;Name=CleRt_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05550;old_locus_tag=CleRT_10850
NZ_CP011126.1	Protein Homology	CDS	1180261	1181325	.	-	0	ID=cds1153;Parent=gene1191;Dbxref=Genbank:WP_048875386.1;Name=WP_048875386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957820.1;product=LPS export ABC transporter permease LptG;protein_id=WP_048875386.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1181313	1182437	.	-	.	ID=gene1192;Name=CleRt_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05555;old_locus_tag=CleRT_10860
NZ_CP011126.1	Protein Homology	CDS	1181313	1182437	.	-	0	ID=cds1154;Parent=gene1192;Dbxref=Genbank:WP_048875387.1;Name=WP_048875387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570697.1;product=LPS export ABC transporter permease LptF;protein_id=WP_048875387.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1182512	1185277	.	+	.	ID=gene1193;Name=CleRt_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05560;old_locus_tag=CleRT_10870
NZ_CP011126.1	Protein Homology	CDS	1182512	1185277	.	+	0	ID=cds1155;Parent=gene1193;Dbxref=Genbank:WP_048875388.1;Name=WP_048875388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996800.1;product=valine--tRNA ligase;protein_id=WP_048875388.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1185305	1186444	.	-	.	ID=gene1194;Name=CleRt_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05565;old_locus_tag=CleRT_10880
NZ_CP011126.1	Protein Homology	CDS	1185305	1186444	.	-	0	ID=cds1156;Parent=gene1194;Dbxref=Genbank:WP_048875389.1;Name=WP_048875389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253293.1;product=serine hydrolase;protein_id=WP_048875389.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1186517	1189582	.	-	.	ID=gene1195;Name=CleRt_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05570;old_locus_tag=CleRT_10890
NZ_CP011126.1	Protein Homology	CDS	1186517	1189582	.	-	0	ID=cds1157;Parent=gene1195;Dbxref=Genbank:WP_048875390.1;Name=WP_048875390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996798.1;product=AcrB/AcrD/AcrF family protein;protein_id=WP_048875390.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1189617	1190675	.	-	.	ID=gene1196;Name=CleRt_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05575;old_locus_tag=CleRT_10900
NZ_CP011126.1	Protein Homology	CDS	1189617	1190675	.	-	0	ID=cds1158;Parent=gene1196;Dbxref=Genbank:WP_048875391.1;Name=WP_048875391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253295.1;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_048875391.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1190910	1191158	.	+	.	ID=gene1197;Name=CleRt_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05580
NZ_CP011126.1	GeneMarkS+	CDS	1190910	1191158	.	+	0	ID=cds1159;Parent=gene1197;Dbxref=Genbank:WP_048875392.1;Name=WP_048875392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875392.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1191421	1191750	.	+	.	ID=gene1198;Name=CleRt_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05585
NZ_CP011126.1	GeneMarkS+	CDS	1191421	1191750	.	+	0	ID=cds1160;Parent=gene1198;Dbxref=Genbank:WP_048875393.1;Name=WP_048875393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875393.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1192300	1192821	.	-	.	ID=gene1199;Name=CleRt_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05590
NZ_CP011126.1	GeneMarkS+	CDS	1192300	1192821	.	-	0	ID=cds1161;Parent=gene1199;Dbxref=Genbank:WP_048875394.1;Name=WP_048875394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=cytochrome P450;protein_id=WP_048875394.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1193931	1194371	.	-	.	ID=gene1200;Name=CleRt_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05595
NZ_CP011126.1	GeneMarkS+	CDS	1193931	1194371	.	-	0	ID=cds1162;Parent=gene1200;Dbxref=Genbank:WP_048875395.1;Name=WP_048875395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875395.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1194862	1195095	.	-	.	ID=gene1201;Name=CleRt_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05600
NZ_CP011126.1	GeneMarkS+	CDS	1194862	1195095	.	-	0	ID=cds1163;Parent=gene1201;Dbxref=Genbank:WP_048875396.1;Name=WP_048875396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875396.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1195693	1196076	.	-	.	ID=gene1202;Name=CleRt_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05605;old_locus_tag=CleRT_10960
NZ_CP011126.1	Protein Homology	CDS	1195693	1196076	.	-	0	ID=cds1164;Parent=gene1202;Dbxref=Genbank:WP_048875397.1;Name=WP_048875397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957811.1;product=hypothetical protein;protein_id=WP_048875397.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1196266	1197261	.	+	.	ID=gene1203;Name=CleRt_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05610;old_locus_tag=CleRT_10970
NZ_CP011126.1	Protein Homology	CDS	1196266	1197261	.	+	0	ID=cds1165;Parent=gene1203;Dbxref=Genbank:WP_048875398.1;Name=WP_048875398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957810.1;product=HlyD family secretion protein;protein_id=WP_048875398.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1197283	1198821	.	+	.	ID=gene1204;Name=CleRt_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05615;old_locus_tag=CleRT_10980
NZ_CP011126.1	Protein Homology	CDS	1197283	1198821	.	+	0	ID=cds1166;Parent=gene1204;Dbxref=Genbank:WP_048875399.1;Name=WP_048875399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772588.1;product=MFS transporter;protein_id=WP_048875399.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1198835	1199173	.	+	.	ID=gene1205;Name=CleRt_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05620;old_locus_tag=CleRT_10990
NZ_CP011126.1	Protein Homology	CDS	1198835	1199173	.	+	0	ID=cds1167;Parent=gene1205;Dbxref=Genbank:WP_048875400.1;Name=WP_048875400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012070673.1;product=histidine triad nucleotide-binding protein;protein_id=WP_048875400.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1199239	1199796	.	+	.	ID=gene1206;Name=CleRt_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05625;old_locus_tag=CleRT_11000
NZ_CP011126.1	Protein Homology	CDS	1199239	1199796	.	+	0	ID=cds1168;Parent=gene1206;Dbxref=Genbank:WP_048875401.1;Name=WP_048875401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008172758.1;product=GTP cyclohydrolase I FolE;protein_id=WP_048875401.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1199822	1199905	.	+	.	ID=gene1207;Name=CleRt_RS05630;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS05630;old_locus_tag=CleRT_t037
NZ_CP011126.1	tRNAscan-SE	tRNA	1199822	1199905	.	+	.	ID=rna38;Parent=gene1207;anticodon=(pos:1199856..1199858);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	tRNAscan-SE	exon	1199822	1199905	.	+	.	ID=id39;Parent=rna38;anticodon=(pos:1199856..1199858);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Leu
NZ_CP011126.1	RefSeq	gene	1200244	1200513	.	+	.	ID=gene1208;Name=CleRt_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05635
NZ_CP011126.1	GeneMarkS+	CDS	1200244	1200513	.	+	0	ID=cds1169;Parent=gene1208;Dbxref=Genbank:WP_048875402.1;Name=WP_048875402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875402.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1200773	1200988	.	+	.	ID=gene1209;Name=CleRt_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09180
NZ_CP011126.1	Protein Homology	CDS	1200773	1200988	.	+	0	ID=cds1170;Parent=gene1209;Dbxref=Genbank:WP_082160444.1;Name=WP_082160444.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00004.27;product=hypothetical protein;protein_id=WP_082160444.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1201095	1201310	.	+	.	ID=gene1210;Name=CleRt_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09185
NZ_CP011126.1	GeneMarkS+	CDS	1201095	1201310	.	+	0	ID=cds1171;Parent=gene1210;Dbxref=Genbank:WP_082160445.1;Name=WP_082160445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160445.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1203374	1203559	.	+	.	ID=gene1211;Name=CleRt_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05645
NZ_CP011126.1	GeneMarkS+	CDS	1203374	1203559	.	+	0	ID=cds1172;Parent=gene1211;Dbxref=Genbank:WP_048875404.1;Name=WP_048875404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875404.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1204064	1204349	.	-	.	ID=gene1212;Name=CleRt_RS05650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05650;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1204064	1204349	.	-	0	ID=cds1173;Parent=gene1212;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005768967.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1204365	1204655	.	-	.	ID=gene1213;Name=CleRt_RS05655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05655;partial=true;pseudo=true;start_range=.,1204365
NZ_CP011126.1	Protein Homology	CDS	1204365	1204655	.	-	0	ID=cds1174;Parent=gene1213;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957794.1;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1204365;transl_table=11
NZ_CP011126.1	RefSeq	gene	1204960	1205283	.	-	.	ID=gene1214;Name=CleRt_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09190
NZ_CP011126.1	GeneMarkS+	CDS	1204960	1205283	.	-	0	ID=cds1175;Parent=gene1214;Dbxref=Genbank:WP_082160446.1;Name=WP_082160446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160446.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1205359	1205553	.	-	.	ID=gene1215;Name=CleRt_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09195
NZ_CP011126.1	GeneMarkS+	CDS	1205359	1205553	.	-	0	ID=cds1176;Parent=gene1215;Dbxref=Genbank:WP_082160447.1;Name=WP_082160447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160447.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1205663	1206046	.	-	.	ID=gene1216;Name=CleRt_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05665;old_locus_tag=CleRT_11050
NZ_CP011126.1	GeneMarkS+	CDS	1205663	1206046	.	-	0	ID=cds1177;Parent=gene1216;Dbxref=Genbank:WP_048875405.1;Name=WP_048875405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875405.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1206913	1208326	.	-	.	ID=gene1217;Name=CleRt_RS05670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05670;old_locus_tag=CleRT_11060;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1206913	1208326	.	-	0	ID=cds1178;Parent=gene1217;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996771.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1208395	1209046	.	-	.	ID=gene1218;Name=sirA;gbkey=Gene;gene=sirA;gene_biotype=pseudogene;locus_tag=CleRt_RS05675;old_locus_tag=CleRT_11070;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1208395	1209046	.	-	0	ID=cds1179;Parent=gene1218;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system%3B frameshifted%3B internal stop;gbkey=CDS;gene=sirA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252917.1;product=two-component system response regulator UvrY;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1209229	1209679	.	+	.	ID=gene1219;Name=CleRt_RS05680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05680;old_locus_tag=CleRT_11080;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1209229	1209679	.	+	0	ID=cds1180;Parent=gene1219;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770949.1;product=inosine-5-monophosphate dehydrogenase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1209875	1210659	.	+	.	ID=gene1220;Name=CleRt_RS05685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05685;old_locus_tag=CleRT_11090;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1209875	1210659	.	+	0	ID=cds1181;Parent=gene1220;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220606.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1210648	1211748	.	-	.	ID=gene1221;Name=CleRt_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05690;old_locus_tag=CleRT_11100
NZ_CP011126.1	Protein Homology	CDS	1210648	1211748	.	-	0	ID=cds1182;Parent=gene1221;Dbxref=Genbank:WP_048875406.1;Name=WP_048875406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772955.1;product=FUSC family protein;protein_id=WP_048875406.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1211781	1212653	.	-	.	ID=gene1222;Name=CleRt_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05695;old_locus_tag=CleRT_11110
NZ_CP011126.1	Protein Homology	CDS	1211781	1212653	.	-	0	ID=cds1183;Parent=gene1222;Dbxref=Genbank:WP_048875407.1;Name=WP_048875407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958159.1;product=EamA/RhaT family transporter;protein_id=WP_048875407.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1212734	1216147	.	-	.	ID=gene1223;Name=CleRt_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05700;old_locus_tag=CleRT_11120
NZ_CP011126.1	Protein Homology	CDS	1212734	1216147	.	-	0	ID=cds1184;Parent=gene1223;Dbxref=Genbank:WP_048875408.1;Name=WP_048875408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013033609.1;product=DNA polymerase III subunit alpha;protein_id=WP_048875408.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1216235	1217347	.	-	.	ID=gene1224;Name=CleRt_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05705;old_locus_tag=CleRT_11130
NZ_CP011126.1	Protein Homology	CDS	1216235	1217347	.	-	0	ID=cds1185;Parent=gene1224;Dbxref=Genbank:WP_048875409.1;Name=WP_048875409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772895.1;product=D-alanine--D-alanine ligase A;protein_id=WP_048875409.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1218507	1218860	.	-	.	ID=gene1225;Name=CleRt_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05710;old_locus_tag=CleRT_11150
NZ_CP011126.1	GeneMarkS+	CDS	1218507	1218860	.	-	0	ID=cds1186;Parent=gene1225;Dbxref=Genbank:WP_048875410.1;Name=WP_048875410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875410.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1219640	1219918	.	-	.	ID=gene1226;Name=CleRt_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05715
NZ_CP011126.1	GeneMarkS+	CDS	1219640	1219918	.	-	0	ID=cds1187;Parent=gene1226;Dbxref=Genbank:WP_048875411.1;Name=WP_048875411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875411.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1221274	1221886	.	-	.	ID=gene1227;Name=CleRt_RS05720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05720;old_locus_tag=CleRT_11170;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1221274	1221886	.	-	0	ID=cds1188;Parent=gene1227;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004301438.1;product=ribonuclease HII;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1222237	1223811	.	-	.	ID=gene1228;Name=CleRt_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05725;old_locus_tag=CleRT_11180
NZ_CP011126.1	Protein Homology	CDS	1222237	1223811	.	-	0	ID=cds1189;Parent=gene1228;Dbxref=Genbank:WP_048875412.1;Name=WP_048875412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958163.1;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_048875412.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1223876	1225345	.	-	.	ID=gene1229;Name=CleRt_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05730;old_locus_tag=CleRT_11190
NZ_CP011126.1	Protein Homology	CDS	1223876	1225345	.	-	0	ID=cds1190;Parent=gene1229;Dbxref=Genbank:WP_048875804.1;Name=WP_048875804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770973.1;product=IMP dehydrogenase;protein_id=WP_048875804.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1225348	1225617	.	-	.	ID=gene1230;Name=CleRt_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05735
NZ_CP011126.1	GeneMarkS+	CDS	1225348	1225617	.	-	0	ID=cds1191;Parent=gene1230;Dbxref=Genbank:WP_048875413.1;Name=WP_048875413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875413.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1225610	1226212	.	-	.	ID=gene1231;Name=CleRt_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05740;old_locus_tag=CleRT_11200
NZ_CP011126.1	GeneMarkS+	CDS	1225610	1226212	.	-	0	ID=cds1192;Parent=gene1231;Dbxref=Genbank:WP_048875000.1;Name=WP_048875000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875000.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1226386	1226667	.	-	.	ID=gene1232;Name=CleRt_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05745;old_locus_tag=CleRT_11210
NZ_CP011126.1	GeneMarkS+	CDS	1226386	1226667	.	-	0	ID=cds1193;Parent=gene1232;Dbxref=Genbank:WP_048874999.1;Name=WP_048874999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874999.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1226645	1226917	.	-	.	ID=gene1233;Name=CleRt_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05750
NZ_CP011126.1	GeneMarkS+	CDS	1226645	1226917	.	-	0	ID=cds1194;Parent=gene1233;Dbxref=Genbank:WP_048874998.1;Name=WP_048874998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048874998.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1227707	1227943	.	-	.	ID=gene1234;Name=CleRt_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05755
NZ_CP011126.1	GeneMarkS+	CDS	1227707	1227943	.	-	0	ID=cds1195;Parent=gene1234;Dbxref=Genbank:WP_048875414.1;Name=WP_048875414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875414.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1228314	1228571	.	-	.	ID=gene1235;Name=CleRt_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05760
NZ_CP011126.1	GeneMarkS+	CDS	1228314	1228571	.	-	0	ID=cds1196;Parent=gene1235;Dbxref=Genbank:WP_048875415.1;Name=WP_048875415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875415.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1229233	1229661	.	+	.	ID=gene1236;Name=CleRt_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08400
NZ_CP011126.1	GeneMarkS+	CDS	1229233	1229661	.	+	0	ID=cds1197;Parent=gene1236;Dbxref=Genbank:WP_053097900.1;Name=WP_053097900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097900.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1230891	1231202	.	+	.	ID=gene1237;Name=CleRt_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08405
NZ_CP011126.1	GeneMarkS+	CDS	1230891	1231202	.	+	0	ID=cds1198;Parent=gene1237;Dbxref=Genbank:WP_053097902.1;Name=WP_053097902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097902.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1231655	1232481	.	+	.	ID=gene1238;Name=CleRt_RS09200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09200;old_locus_tag=CleRT_11250;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1231655	1232481	.	+	0	ID=cds1199;Parent=gene1238;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958166.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1232535	1233233	.	-	.	ID=gene1239;Name=CleRt_RS05780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05780;old_locus_tag=CleRT_11260;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1232535	1233233	.	-	0	ID=cds1200;Parent=gene1239;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011996977.1;product=L%2CD-transpeptidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1233310	1234762	.	-	.	ID=gene1240;Name=CleRt_RS05785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05785;old_locus_tag=CleRT_11270;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1233310	1234762	.	-	0	ID=cds1201;Parent=gene1240;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772897.1;product=transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1234799	1236175	.	-	.	ID=gene1241;Name=CleRt_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05790;old_locus_tag=CleRT_11280
NZ_CP011126.1	Protein Homology	CDS	1234799	1236175	.	-	0	ID=cds1202;Parent=gene1241;Dbxref=Genbank:WP_048875416.1;Name=WP_048875416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008931992.1;product=phosphoglucosamine mutase;protein_id=WP_048875416.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1236200	1237069	.	-	.	ID=gene1242;Name=CleRt_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05795;old_locus_tag=CleRT_11290
NZ_CP011126.1	Protein Homology	CDS	1236200	1237069	.	-	0	ID=cds1203;Parent=gene1242;Dbxref=Genbank:WP_048875417.1;Name=WP_048875417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770994.1;product=dihydropteroate synthase;protein_id=WP_048875417.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1237130	1239073	.	-	.	ID=gene1243;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;locus_tag=CleRt_RS05800;old_locus_tag=CleRT_11300
NZ_CP011126.1	Protein Homology	CDS	1237130	1239073	.	-	0	ID=cds1204;Parent=gene1243;Dbxref=Genbank:WP_048875418.1;Name=WP_048875418.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997087.1;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_048875418.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1239093	1239731	.	-	.	ID=gene1244;Name=CleRt_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05805;old_locus_tag=CleRT_11310
NZ_CP011126.1	Protein Homology	CDS	1239093	1239731	.	-	0	ID=cds1205;Parent=gene1244;Dbxref=Genbank:WP_048875419.1;Name=WP_048875419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958173.1;product=RlmE family RNA methyltransferase;protein_id=WP_048875419.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1239776	1240333	.	-	.	ID=gene1245;Name=CleRt_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05810;old_locus_tag=CleRT_11320
NZ_CP011126.1	Protein Homology	CDS	1239776	1240333	.	-	0	ID=cds1206;Parent=gene1245;Dbxref=Genbank:WP_048875420.1;Name=WP_048875420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018002627.1;product=putative Fe-S cluster assembly protein SufT;protein_id=WP_048875420.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1240320	1240691	.	-	.	ID=gene1246;Name=CleRt_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05815
NZ_CP011126.1	Protein Homology	CDS	1240320	1240691	.	-	0	ID=cds1207;Parent=gene1246;Dbxref=Genbank:WP_048875805.1;Name=WP_048875805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771000.1;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_048875805.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1240734	1241144	.	-	.	ID=gene1247;Name=CleRt_RS05820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05820;partial=true;pseudo=true;start_range=.,1240734
NZ_CP011126.1	Protein Homology	CDS	1240734	1241144	.	-	0	ID=cds1208;Parent=gene1247;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770556.1;partial=true;product=iron-sulfur cluster assembly scaffold protein;pseudo=true;start_range=.,1240734;transl_table=11
NZ_CP011126.1	RefSeq	gene	1241149	1242387	.	-	.	ID=gene1248;Name=CleRt_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05825;old_locus_tag=CleRT_11340
NZ_CP011126.1	Protein Homology	CDS	1241149	1242387	.	-	0	ID=cds1209;Parent=gene1248;Dbxref=Genbank:WP_048875421.1;Name=WP_048875421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958175.1;product=cysteine desulfurase;protein_id=WP_048875421.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1242380	1243669	.	-	.	ID=gene1249;Name=CleRt_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05830;old_locus_tag=CleRT_11350
NZ_CP011126.1	Protein Homology	CDS	1242380	1243669	.	-	0	ID=cds1210;Parent=gene1249;Dbxref=Genbank:WP_048875422.1;Name=WP_048875422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569866.1;product=Fe-S cluster assembly protein SufD;protein_id=WP_048875422.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1243672	1244406	.	-	.	ID=gene1250;Name=CleRt_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05835;old_locus_tag=CleRT_11360
NZ_CP011126.1	Protein Homology	CDS	1243672	1244406	.	-	0	ID=cds1211;Parent=gene1250;Dbxref=Genbank:WP_048875807.1;Name=WP_048875807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772924.1;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_048875807.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1244439	1245881	.	-	.	ID=gene1251;Name=CleRt_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05840;old_locus_tag=CleRT_11370
NZ_CP011126.1	Protein Homology	CDS	1244439	1245881	.	-	0	ID=cds1212;Parent=gene1251;Dbxref=Genbank:WP_048875423.1;Name=WP_048875423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810842.1;product=Fe-S cluster assembly protein SufB;protein_id=WP_048875423.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1245928	1246386	.	-	.	ID=gene1252;Name=CleRt_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05845;old_locus_tag=CleRT_11380
NZ_CP011126.1	Protein Homology	CDS	1245928	1246386	.	-	0	ID=cds1213;Parent=gene1252;Dbxref=Genbank:WP_048875424.1;Name=WP_048875424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958178.1;product=SUF system Fe-S cluster assembly regulator;protein_id=WP_048875424.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1246565	1247707	.	+	.	ID=gene1253;Name=CleRt_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05850;old_locus_tag=CleRT_11390
NZ_CP011126.1	Protein Homology	CDS	1246565	1247707	.	+	0	ID=cds1214;Parent=gene1253;Dbxref=Genbank:WP_048875425.1;Name=WP_048875425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771020.1;product=cation transporter;protein_id=WP_048875425.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1247704	1249161	.	+	.	ID=gene1254;Name=CleRt_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05855;old_locus_tag=CleRT_11400
NZ_CP011126.1	Protein Homology	CDS	1247704	1249161	.	+	0	ID=cds1215;Parent=gene1254;Dbxref=Genbank:WP_048875426.1;Name=WP_048875426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569863.1;product=exodeoxyribonuclease I;protein_id=WP_048875426.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1249245	1249490	.	+	.	ID=gene1255;Name=CleRt_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05860
NZ_CP011126.1	Protein Homology	CDS	1249245	1249490	.	+	0	ID=cds1216;Parent=gene1255;Dbxref=Genbank:WP_082160448.1;Name=WP_082160448.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03306.11;product=hypothetical protein;protein_id=WP_082160448.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1249647	1249835	.	+	.	ID=gene1256;Name=CleRt_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09205
NZ_CP011126.1	Protein Homology	CDS	1249647	1249835	.	+	0	ID=cds1217;Parent=gene1256;Dbxref=Genbank:WP_082160449.1;Name=WP_082160449.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03306.11;product=hypothetical protein;protein_id=WP_082160449.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1250607	1250774	.	+	.	ID=gene1257;Name=CleRt_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09210
NZ_CP011126.1	Protein Homology	CDS	1250607	1250774	.	+	0	ID=cds1218;Parent=gene1257;Dbxref=Genbank:WP_082160450.1;Name=WP_082160450.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13744.4;product=hypothetical protein;protein_id=WP_082160450.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1250812	1251249	.	-	.	ID=gene1258;Name=CleRt_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05865;old_locus_tag=CleRT_11440
NZ_CP011126.1	GeneMarkS+	CDS	1250812	1251249	.	-	0	ID=cds1219;Parent=gene1258;Dbxref=Genbank:WP_048875428.1;Name=WP_048875428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875428.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1251608	1252030	.	-	.	ID=gene1259;Name=CleRt_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05870
NZ_CP011126.1	Protein Homology	CDS	1251608	1252030	.	-	0	ID=cds1220;Parent=gene1259;Dbxref=Genbank:WP_048875429.1;Name=WP_048875429.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08548.9;product=hypothetical protein;protein_id=WP_048875429.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1252274	1252600	.	-	.	ID=gene1260;Name=CleRt_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05875
NZ_CP011126.1	GeneMarkS+	CDS	1252274	1252600	.	-	0	ID=cds1221;Parent=gene1260;Dbxref=Genbank:WP_048875430.1;Name=WP_048875430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875430.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1253989	1254666	.	-	.	ID=gene1261;Name=CleRt_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05880;old_locus_tag=CleRT_11460
NZ_CP011126.1	Protein Homology	CDS	1253989	1254666	.	-	0	ID=cds1222;Parent=gene1261;Dbxref=Genbank:WP_048875431.1;Name=WP_048875431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253444.1;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_048875431.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1254644	1255216	.	-	.	ID=gene1262;Name=CleRt_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05885;old_locus_tag=CleRT_11470
NZ_CP011126.1	Protein Homology	CDS	1254644	1255216	.	-	0	ID=cds1223;Parent=gene1262;Dbxref=Genbank:WP_048875432.1;Name=WP_048875432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569860.1;product=hypothetical protein;protein_id=WP_048875432.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1255534	1255653	.	+	.	ID=gene1263;Name=CleRt_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09215
NZ_CP011126.1	Protein Homology	CDS	1255534	1255653	.	+	0	ID=cds1224;Parent=gene1263;Dbxref=Genbank:WP_082160507.1;Name=WP_082160507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01927.14;product=hypothetical protein;protein_id=WP_082160507.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1255684	1255782	.	+	.	ID=gene1264;Name=CleRt_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09220
NZ_CP011126.1	Protein Homology	CDS	1255684	1255782	.	+	0	ID=cds1225;Parent=gene1264;Dbxref=Genbank:WP_082160451.1;Name=WP_082160451.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01927.14;product=hypothetical protein;protein_id=WP_082160451.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1255819	1256298	.	+	.	ID=gene1265;Name=CleRt_RS05890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05890;old_locus_tag=CleRT_11490;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1255819	1256298	.	+	0	ID=cds1226;Parent=gene1265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771036.1;product=tRNA-specific adenosine deaminase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1256391	1257652	.	+	.	ID=gene1266;Name=CleRt_RS05895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05895;old_locus_tag=CleRT_11500;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1256391	1257652	.	+	0	ID=cds1227;Parent=gene1266;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958100.1;product=exodeoxyribonuclease VII large subunit;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1257745	1259244	.	+	.	ID=gene1267;Name=CleRt_RS05900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05900;old_locus_tag=CleRT_11510;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1257745	1259244	.	+	0	ID=cds1228;Parent=gene1267;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772783.1;product=MFS transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1259261	1260598	.	-	.	ID=gene1268;Name=CleRt_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05905;old_locus_tag=CleRT_11520
NZ_CP011126.1	Protein Homology	CDS	1259261	1260598	.	-	0	ID=cds1229;Parent=gene1268;Dbxref=Genbank:WP_048875434.1;Name=WP_048875434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018624420.1;product=ribosome biogenesis GTPase Der;protein_id=WP_048875434.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1260786	1261175	.	-	.	ID=gene1269;Name=CleRt_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05910;old_locus_tag=CleRT_11530
NZ_CP011126.1	Protein Homology	CDS	1260786	1261175	.	-	0	ID=cds1230;Parent=gene1269;Dbxref=Genbank:WP_053097908.1;Name=WP_053097908.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF09976.7;product=hypothetical protein;protein_id=WP_053097908.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1261225	1262550	.	-	.	ID=gene1270;Name=CleRt_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05915;old_locus_tag=CleRT_11540
NZ_CP011126.1	Protein Homology	CDS	1261225	1262550	.	-	0	ID=cds1231;Parent=gene1270;Dbxref=Genbank:WP_082160452.1;Name=WP_082160452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008900503.1;product=histidine--tRNA ligase;protein_id=WP_082160452.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1262547	1263143	.	-	.	ID=gene1271;Name=CleRt_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05920;old_locus_tag=CleRT_11550
NZ_CP011126.1	Protein Homology	CDS	1262547	1263143	.	-	0	ID=cds1232;Parent=gene1271;Dbxref=Genbank:WP_053097911.1;Name=WP_053097911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770807.1;product=transcriptional regulator;protein_id=WP_053097911.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1263242	1264409	.	-	.	ID=gene1272;Name=CleRt_RS05925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05925;old_locus_tag=CleRT_11560;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1263242	1264409	.	-	0	ID=cds1233;Parent=gene1272;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011635190.1;product=23S rRNA (adenine(2503)-C(2))-methyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1264775	1265068	.	+	.	ID=gene1273;Name=CleRt_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05930
NZ_CP011126.1	GeneMarkS+	CDS	1264775	1265068	.	+	0	ID=cds1234;Parent=gene1273;Dbxref=Genbank:WP_048875435.1;Name=WP_048875435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875435.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1266066	1266287	.	+	.	ID=gene1274;Name=CleRt_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05935
NZ_CP011126.1	GeneMarkS+	CDS	1266066	1266287	.	+	0	ID=cds1235;Parent=gene1274;Dbxref=Genbank:WP_048875436.1;Name=WP_048875436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875436.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1266284	1266526	.	+	.	ID=gene1275;Name=CleRt_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05940
NZ_CP011126.1	GeneMarkS+	CDS	1266284	1266526	.	+	0	ID=cds1236;Parent=gene1275;Dbxref=Genbank:WP_048875437.1;Name=WP_048875437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875437.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1267198	1267989	.	-	.	ID=gene1276;Name=CleRt_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05945;old_locus_tag=CleRT_11590
NZ_CP011126.1	Protein Homology	CDS	1267198	1267989	.	-	0	ID=cds1237;Parent=gene1276;Dbxref=Genbank:WP_048875438.1;Name=WP_048875438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770818.1;product=polyprenyl synthetase family protein;protein_id=WP_048875438.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1267990	1268418	.	-	.	ID=gene1277;Name=CleRt_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05950;old_locus_tag=CleRT_11600
NZ_CP011126.1	Protein Homology	CDS	1267990	1268418	.	-	0	ID=cds1238;Parent=gene1277;Dbxref=Genbank:WP_048875439.1;Name=WP_048875439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958107.1;product=nucleoside-diphosphate kinase;protein_id=WP_048875439.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1268542	1270246	.	+	.	ID=gene1278;Name=CleRt_RS05955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS05955;old_locus_tag=CleRT_11610;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1268542	1270246	.	+	0	ID=cds1239;Parent=gene1278;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770826.1;product=Na+/H+ antiporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1270414	1271130	.	+	.	ID=gene1279;Name=CleRt_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05960;old_locus_tag=CleRT_11620
NZ_CP011126.1	Protein Homology	CDS	1270414	1271130	.	+	0	ID=cds1240;Parent=gene1279;Dbxref=Genbank:WP_048875440.1;Name=WP_048875440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569916.1;product=hypothetical protein;protein_id=WP_048875440.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1271242	1272501	.	+	.	ID=gene1280;Name=CleRt_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05965;old_locus_tag=CleRT_11630
NZ_CP011126.1	Protein Homology	CDS	1271242	1272501	.	+	0	ID=cds1241;Parent=gene1280;Dbxref=Genbank:WP_048875441.1;Name=WP_048875441.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569915.1;product=D-alanyl-D-alanine carboxypeptidase;protein_id=WP_048875441.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1273142	1273486	.	-	.	ID=gene1281;Name=CleRt_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05970
NZ_CP011126.1	GeneMarkS+	CDS	1273142	1273486	.	-	0	ID=cds1242;Parent=gene1281;Dbxref=Genbank:WP_048875442.1;Name=WP_048875442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875442.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1274781	1275135	.	+	.	ID=gene1282;Name=CleRt_RS09225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09225;old_locus_tag=CleRT_11660;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1274781	1275135	.	+	0	ID=cds1243;Parent=gene1282;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569912.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1275357	1276022	.	+	.	ID=gene1283;Name=CleRt_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05980;old_locus_tag=CleRT_11670
NZ_CP011126.1	Protein Homology	CDS	1275357	1276022	.	+	0	ID=cds1244;Parent=gene1283;Dbxref=Genbank:WP_082160453.1;Name=WP_082160453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958111.1;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_082160453.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1276015	1276962	.	+	.	ID=gene1284;Name=CleRt_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05985;old_locus_tag=CleRT_11680
NZ_CP011126.1	Protein Homology	CDS	1276015	1276962	.	+	0	ID=cds1245;Parent=gene1284;Dbxref=Genbank:WP_048875445.1;Name=WP_048875445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770840.1;product=lipoyl synthase;protein_id=WP_048875445.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1277002	1279074	.	+	.	ID=gene1285;Name=CleRt_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05990;old_locus_tag=CleRT_11690
NZ_CP011126.1	Protein Homology	CDS	1277002	1279074	.	+	0	ID=cds1246;Parent=gene1285;Dbxref=Genbank:WP_048875446.1;Name=WP_048875446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958113.1;product=membrane protein;protein_id=WP_048875446.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1279166	1279441	.	-	.	ID=gene1286;Name=CleRt_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS05995
NZ_CP011126.1	GeneMarkS+	CDS	1279166	1279441	.	-	0	ID=cds1247;Parent=gene1286;Dbxref=Genbank:WP_048875447.1;Name=WP_048875447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875447.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1280292	1280801	.	-	.	ID=gene1287;Name=CleRt_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06000;old_locus_tag=CleRT_11710
NZ_CP011126.1	Protein Homology	CDS	1280292	1280801	.	-	0	ID=cds1248;Parent=gene1287;Dbxref=Genbank:WP_048875448.1;Name=WP_048875448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006034986.1;product=acyl-CoA thioesterase;protein_id=WP_048875448.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1281063	1281386	.	+	.	ID=gene1288;Name=CleRt_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06005
NZ_CP011126.1	GeneMarkS+	CDS	1281063	1281386	.	+	0	ID=cds1249;Parent=gene1288;Dbxref=Genbank:WP_048875449.1;Name=WP_048875449.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875449.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1281634	1281873	.	+	.	ID=gene1289;Name=CleRt_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06010
NZ_CP011126.1	Protein Homology	CDS	1281634	1281873	.	+	0	ID=cds1250;Parent=gene1289;Dbxref=Genbank:WP_048875450.1;Name=WP_048875450.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF08338.9;product=DUF1731 domain-containing protein;protein_id=WP_048875450.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1281937	1283202	.	+	.	ID=gene1290;Name=CleRt_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06015;old_locus_tag=CleRT_11730
NZ_CP011126.1	Protein Homology	CDS	1281937	1283202	.	+	0	ID=cds1251;Parent=gene1290;Dbxref=Genbank:WP_048875451.1;Name=WP_048875451.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220581.1;product=6-phosphofructokinase;protein_id=WP_048875451.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1283376	1283567	.	-	.	ID=gene1291;Name=CleRt_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08420
NZ_CP011126.1	GeneMarkS+	CDS	1283376	1283567	.	-	0	ID=cds1252;Parent=gene1291;Dbxref=Genbank:WP_053097913.1;Name=WP_053097913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097913.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1283774	1284637	.	-	.	ID=gene1292;Name=CleRt_RS06025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06025;old_locus_tag=CleRT_11750;partial=true;pseudo=true;start_range=.,1283774
NZ_CP011126.1	Protein Homology	CDS	1283774	1284637	.	-	0	ID=cds1253;Parent=gene1292;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770856.1;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1283774;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1284696	1285497	.	-	.	ID=gene1293;Name=CleRt_RS09230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09230;old_locus_tag=CleRT_11760;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1284696	1285497	.	-	0	ID=cds1254;Parent=gene1293;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220582.1;product=short-chain dehydrogenase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1285612	1286253	.	+	.	ID=gene1294;Name=CleRt_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06030;old_locus_tag=CleRT_11770
NZ_CP011126.1	Protein Homology	CDS	1285612	1286253	.	+	0	ID=cds1255;Parent=gene1294;Dbxref=Genbank:WP_082160508.1;Name=WP_082160508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770860.1;product=2-dehydro-3-deoxyphosphogluconate aldolase;protein_id=WP_082160508.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1286253	1286813	.	+	.	ID=gene1295;Name=CleRt_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06035;old_locus_tag=CleRT_11780
NZ_CP011126.1	Protein Homology	CDS	1286253	1286813	.	+	0	ID=cds1256;Parent=gene1295;Dbxref=Genbank:WP_048875453.1;Name=WP_048875453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770862.1;product=thioredoxin family protein;protein_id=WP_048875453.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1286883	1287475	.	+	.	ID=gene1296;Name=CleRt_RS06040;end_range=1287475,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06040;old_locus_tag=CleRT_11790;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1286883	1287475	.	+	0	ID=cds1257;Parent=gene1296;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=1287475,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010946834.1;partial=true;product=sugar transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1287488	1287967	.	-	.	ID=gene1297;Name=CleRt_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06045;old_locus_tag=CleRT_11800
NZ_CP011126.1	Protein Homology	CDS	1287488	1287967	.	-	0	ID=cds1258;Parent=gene1297;Dbxref=Genbank:WP_082160454.1;Name=WP_082160454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770866.1;product=transcription elongation factor GreA;protein_id=WP_082160454.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1288151	1288336	.	+	.	ID=gene1298;Name=CleRt_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06050
NZ_CP011126.1	GeneMarkS+	CDS	1288151	1288336	.	+	0	ID=cds1259;Parent=gene1298;Dbxref=Genbank:WP_048875455.1;Name=WP_048875455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875455.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1288443	1291670	.	-	.	ID=gene1299;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=CleRt_RS06055;old_locus_tag=CleRT_11810
NZ_CP011126.1	Protein Homology	CDS	1288443	1291670	.	-	0	ID=cds1260;Parent=gene1299;Dbxref=Genbank:WP_048875456.1;Name=WP_048875456.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013034578.1;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_048875456.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1291677	1292831	.	-	.	ID=gene1300;Name=CleRt_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06060;old_locus_tag=CleRT_11820
NZ_CP011126.1	Protein Homology	CDS	1291677	1292831	.	-	0	ID=cds1261;Parent=gene1300;Dbxref=Genbank:WP_048875810.1;Name=WP_048875810.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772527.1;product=carbamoyl-phosphate synthase small subunit;protein_id=WP_048875810.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1293003	1294127	.	-	.	ID=gene1301;Name=CleRt_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06065;old_locus_tag=CleRT_11830
NZ_CP011126.1	Protein Homology	CDS	1293003	1294127	.	-	0	ID=cds1262;Parent=gene1301;Dbxref=Genbank:WP_048875457.1;Name=WP_048875457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770880.1;product=molecular chaperone DnaJ;protein_id=WP_048875457.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1294308	1296251	.	-	.	ID=gene1302;Name=CleRt_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06070;old_locus_tag=CleRT_11840
NZ_CP011126.1	Protein Homology	CDS	1294308	1296251	.	-	0	ID=cds1263;Parent=gene1302;Dbxref=Genbank:WP_048875458.1;Name=WP_048875458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569898.1;product=molecular chaperone DnaK;protein_id=WP_048875458.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1296352	1296582	.	-	.	ID=gene1303;Name=CleRt_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06075
NZ_CP011126.1	GeneMarkS+	CDS	1296352	1296582	.	-	0	ID=cds1264;Parent=gene1303;Dbxref=Genbank:WP_048875459.1;Name=WP_048875459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875459.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1296775	1297389	.	-	.	ID=gene1304;Name=CleRt_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06080;old_locus_tag=CleRT_11850
NZ_CP011126.1	Protein Homology	CDS	1296775	1297389	.	-	0	ID=cds1265;Parent=gene1304;Dbxref=Genbank:WP_048875460.1;Name=WP_048875460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220589.1;product=nucleotide exchange factor GrpE;protein_id=WP_048875460.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1297520	1298407	.	+	.	ID=gene1305;Name=CleRt_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06085;old_locus_tag=CleRT_11860
NZ_CP011126.1	Protein Homology	CDS	1297520	1298407	.	+	0	ID=cds1266;Parent=gene1305;Dbxref=Genbank:WP_048875461.1;Name=WP_048875461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006035146.1;product=NAD(+) kinase;protein_id=WP_048875461.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1298409	1299945	.	+	.	ID=gene1306;Name=CleRt_RS06090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06090;old_locus_tag=CleRT_11870;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1298409	1299945	.	+	0	ID=cds1267;Parent=gene1306;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770895.1;product=DNA repair protein RecN;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1300021	1300449	.	-	.	ID=gene1307;Name=CleRt_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06095;old_locus_tag=CleRT_11880
NZ_CP011126.1	Protein Homology	CDS	1300021	1300449	.	-	0	ID=cds1268;Parent=gene1307;Dbxref=Genbank:WP_048875462.1;Name=WP_048875462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958136.1;product=ferric iron uptake transcriptional regulator;protein_id=WP_048875462.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1300683	1301021	.	+	.	ID=gene1308;Name=CleRt_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06100;old_locus_tag=CleRT_11890
NZ_CP011126.1	Protein Homology	CDS	1300683	1301021	.	+	0	ID=cds1269;Parent=gene1308;Dbxref=Genbank:WP_048875463.1;Name=WP_048875463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770900.1;product=outer membrane protein assembly factor BamE;protein_id=WP_048875463.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1301023	1301319	.	-	.	ID=gene1309;Name=CleRt_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06105;old_locus_tag=CleRT_11900
NZ_CP011126.1	Protein Homology	CDS	1301023	1301319	.	-	0	ID=cds1270;Parent=gene1309;Dbxref=Genbank:WP_048875464.1;Name=WP_048875464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770901.1;product=RnfH family protein;protein_id=WP_048875464.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1301316	1301756	.	-	.	ID=gene1310;Name=CleRt_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06110;old_locus_tag=CleRT_11910
NZ_CP011126.1	Protein Homology	CDS	1301316	1301756	.	-	0	ID=cds1271;Parent=gene1310;Dbxref=Genbank:WP_048875465.1;Name=WP_048875465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005773021.1;product=ubiquinone-binding protein;protein_id=WP_048875465.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1301783	1302262	.	+	.	ID=gene1311;Name=CleRt_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06115;old_locus_tag=CleRT_11920
NZ_CP011126.1	Protein Homology	CDS	1301783	1302262	.	+	0	ID=cds1272;Parent=gene1311;Dbxref=Genbank:WP_048875466.1;Name=WP_048875466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005773019.1;product=SsrA-binding protein SmpB;protein_id=WP_048875466.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1302263	1303112	.	+	.	ID=gene1312;Name=CleRt_RS06120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06120;old_locus_tag=CleRT_11930;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1302263	1303112	.	+	0	ID=cds1273;Parent=gene1312;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569891.1;product=peptide-methionine (S)-S-oxide reductase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1303192	1303549	.	+	.	ID=gene1313;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=CleRt_RS09235
NZ_CP011126.1	cmsearch	tmRNA	1303192	1303549	.	+	.	ID=rna39;Parent=gene1313;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;product=transfer-messenger RNA
NZ_CP011126.1	cmsearch	exon	1303192	1303549	.	+	.	ID=id40;Parent=rna39;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;product=transfer-messenger RNA
NZ_CP011126.1	RefSeq	pseudogene	1303576	1304667	.	-	.	ID=gene1314;Name=CleRt_RS06125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06125;old_locus_tag=CleRT_11940;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1303576	1304667	.	-	0	ID=cds1274;Parent=gene1314;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008963106.1;product=cell filamentation protein Fic;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1305675	1305905	.	-	.	ID=gene1315;Name=CleRt_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06130
NZ_CP011126.1	GeneMarkS+	CDS	1305675	1305905	.	-	0	ID=cds1275;Parent=gene1315;Dbxref=Genbank:WP_048875467.1;Name=WP_048875467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875467.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1306519	1306776	.	-	.	ID=gene1316;Name=CleRt_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06135
NZ_CP011126.1	GeneMarkS+	CDS	1306519	1306776	.	-	0	ID=cds1276;Parent=gene1316;Dbxref=Genbank:WP_048875468.1;Name=WP_048875468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875468.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1306789	1306980	.	-	.	ID=gene1317;Name=CleRt_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06140
NZ_CP011126.1	GeneMarkS+	CDS	1306789	1306980	.	-	0	ID=cds1277;Parent=gene1317;Dbxref=Genbank:WP_048875469.1;Name=WP_048875469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875469.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1306984	1307202	.	-	.	ID=gene1318;Name=CleRt_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06145
NZ_CP011126.1	GeneMarkS+	CDS	1306984	1307202	.	-	0	ID=cds1278;Parent=gene1318;Dbxref=Genbank:WP_048875470.1;Name=WP_048875470.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875470.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1309115	1309342	.	-	.	ID=gene1319;Name=CleRt_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06150
NZ_CP011126.1	GeneMarkS+	CDS	1309115	1309342	.	-	0	ID=cds1279;Parent=gene1319;Dbxref=Genbank:WP_048875471.1;Name=WP_048875471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875471.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1313957	1314079	.	+	.	ID=gene1320;Name=CleRt_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09240
NZ_CP011126.1	Protein Homology	CDS	1313957	1314079	.	+	0	ID=cds1280;Parent=gene1320;Dbxref=Genbank:WP_082160509.1;Name=WP_082160509.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF10142.7;product=hypothetical protein;protein_id=WP_082160509.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1315573	1315803	.	-	.	ID=gene1321;Name=CleRt_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06155
NZ_CP011126.1	GeneMarkS+	CDS	1315573	1315803	.	-	0	ID=cds1281;Parent=gene1321;Dbxref=Genbank:WP_048875472.1;Name=WP_048875472.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875472.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1316278	1316553	.	+	.	ID=gene1322;Name=CleRt_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06160;old_locus_tag=CleRT_12020
NZ_CP011126.1	GeneMarkS+	CDS	1316278	1316553	.	+	0	ID=cds1282;Parent=gene1322;Dbxref=Genbank:WP_048875473.1;Name=WP_048875473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875473.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1316786	1318809	.	-	.	ID=gene1323;Name=CleRt_RS09245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09245;old_locus_tag=CleRT_12040;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1316786	1318809	.	-	0	ID=cds1283;Parent=gene1323;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013849538.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1318847	1319308	.	-	.	ID=gene1324;Name=CleRt_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06175;old_locus_tag=CleRT_12050
NZ_CP011126.1	Protein Homology	CDS	1318847	1319308	.	-	0	ID=cds1284;Parent=gene1324;Dbxref=Genbank:WP_048875474.1;Name=WP_048875474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015588099.1;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_048875474.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1320266	1320646	.	+	.	ID=gene1325;Name=CleRt_RS06180;end_range=1320646,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06180;old_locus_tag=CleRT_12070;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1320266	1320646	.	+	0	ID=cds1285;Parent=gene1325;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=1320646,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772212.1;partial=true;product=spermidine acetyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1320890	1321156	.	-	.	ID=gene1326;Name=CleRt_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06185;old_locus_tag=CleRT_12080
NZ_CP011126.1	Protein Homology	CDS	1320890	1321156	.	-	0	ID=cds1286;Parent=gene1326;Dbxref=Genbank:WP_048875475.1;Name=WP_048875475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220228.1;product=hypothetical protein;protein_id=WP_048875475.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1321170	1321547	.	-	.	ID=gene1327;Name=CleRt_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06190;old_locus_tag=CleRT_12090
NZ_CP011126.1	Protein Homology	CDS	1321170	1321547	.	-	0	ID=cds1287;Parent=gene1327;Dbxref=Genbank:WP_048875476.1;Name=WP_048875476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771322.1;product=DNA-binding protein;protein_id=WP_048875476.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1322019	1322630	.	+	.	ID=gene1328;Name=CleRt_RS06195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06195;old_locus_tag=CleRT_12100;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1322019	1322630	.	+	0	ID=cds1288;Parent=gene1328;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570310.1;product=phosphoribosyl transferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1322937	1323179	.	+	.	ID=gene1329;Name=CleRt_RS09250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09250;old_locus_tag=CleRT_12110;partial=true;pseudo=true;start_range=.,1322937
NZ_CP011126.1	Protein Homology	CDS	1322937	1323179	.	+	0	ID=cds1289;Parent=gene1329;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771337.1;partial=true;product=exodeoxyribonuclease VII small subunit;pseudo=true;start_range=.,1322937;transl_table=11
NZ_CP011126.1	RefSeq	gene	1323336	1324220	.	-	.	ID=gene1330;Name=CleRt_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06200;old_locus_tag=CleRT_12120
NZ_CP011126.1	Protein Homology	CDS	1323336	1324220	.	-	0	ID=cds1290;Parent=gene1330;Dbxref=Genbank:WP_048875477.1;Name=WP_048875477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220224.1;product=methyltransferase domain-containing protein;protein_id=WP_048875477.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1324413	1325004	.	+	.	ID=gene1331;Name=CleRt_RS09255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09255;old_locus_tag=CleRT_12130;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1324413	1325004	.	+	0	ID=cds1291;Parent=gene1331;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220223.1;product=amidophosphoribosyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1325133	1326545	.	-	.	ID=gene1332;Name=CleRt_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06205;old_locus_tag=CleRT_12140
NZ_CP011126.1	Protein Homology	CDS	1325133	1326545	.	-	0	ID=cds1292;Parent=gene1332;Dbxref=Genbank:WP_048875478.1;Name=WP_048875478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957594.1;product=dihydrolipoyl dehydrogenase;protein_id=WP_048875478.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1326628	1327944	.	-	.	ID=gene1333;Name=CleRt_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06210;old_locus_tag=CleRT_12150
NZ_CP011126.1	Protein Homology	CDS	1326628	1327944	.	-	0	ID=cds1293;Parent=gene1333;Dbxref=Genbank:WP_048875811.1;Name=WP_048875811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220222.1;product=branched-chain alpha-keto acid dehydrogenase subunit E2;protein_id=WP_048875811.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1327958	1330612	.	-	.	ID=gene1334;Name=CleRt_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06215;old_locus_tag=CleRT_12160
NZ_CP011126.1	Protein Homology	CDS	1327958	1330612	.	-	0	ID=cds1294;Parent=gene1334;Dbxref=Genbank:WP_048875479.1;Name=WP_048875479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007039632.1;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_048875479.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1330682	1331460	.	-	.	ID=gene1335;Name=CleRt_RS06220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06220;old_locus_tag=CleRT_12170;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1330682	1331460	.	-	0	ID=cds1295;Parent=gene1335;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771347.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1331555	1332721	.	-	.	ID=gene1336;Name=CleRt_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06225;old_locus_tag=CleRT_12180
NZ_CP011126.1	Protein Homology	CDS	1331555	1332721	.	-	0	ID=cds1296;Parent=gene1336;Dbxref=Genbank:WP_048875480.1;Name=WP_048875480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006035398.1;product=sodium:hydrogen antiporter;protein_id=WP_048875480.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1332952	1333358	.	+	.	ID=gene1337;Name=CleRt_RS06230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06230;old_locus_tag=CleRT_12190;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1332952	1333358	.	+	0	ID=cds1297;Parent=gene1337;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771358.1;product=nucleoid-structuring protein H-NS;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1333470	1334156	.	-	.	ID=gene1338;Name=CleRt_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06235;old_locus_tag=CleRT_12200
NZ_CP011126.1	Protein Homology	CDS	1333470	1334156	.	-	0	ID=cds1298;Parent=gene1338;Dbxref=Genbank:WP_048875481.1;Name=WP_048875481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009455661.1;product=adenylate kinase;protein_id=WP_048875481.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1334546	1335549	.	-	.	ID=gene1339;Name=CleRt_RS06240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06240;old_locus_tag=CleRT_12220;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1334546	1335549	.	-	0	ID=cds1299;Parent=gene1339;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570319.1;product=magnesium/cobalt efflux protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1335794	1336289	.	-	.	ID=gene1340;Name=CleRt_RS06245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06245;old_locus_tag=CleRT_12230;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1335794	1336289	.	-	0	ID=cds1300;Parent=gene1340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771367.1;product=cytochrome C assembly protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1336322	1337706	.	+	.	ID=gene1341;Name=CleRt_RS06250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06250;old_locus_tag=CleRT_12240;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1336322	1337706	.	+	0	ID=cds1301;Parent=gene1341;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220220.1;product=signal recognition particle protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1337875	1338270	.	+	.	ID=gene1342;Name=CleRt_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06255;old_locus_tag=CleRT_12250
NZ_CP011126.1	Protein Homology	CDS	1337875	1338270	.	+	0	ID=cds1302;Parent=gene1342;Dbxref=Genbank:WP_048875482.1;Name=WP_048875482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010507015.1;product=30S ribosomal protein S16;protein_id=WP_048875482.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1338285	1338788	.	+	.	ID=gene1343;Name=CleRt_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06260;old_locus_tag=CleRT_12260
NZ_CP011126.1	Protein Homology	CDS	1338285	1338788	.	+	0	ID=cds1303;Parent=gene1343;Dbxref=Genbank:WP_048875483.1;Name=WP_048875483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220219.1;product=ribosome maturation factor RimM;protein_id=WP_048875483.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1338775	1339533	.	+	.	ID=gene1344;Name=CleRt_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06265;old_locus_tag=CleRT_12270
NZ_CP011126.1	Protein Homology	CDS	1338775	1339533	.	+	0	ID=cds1304;Parent=gene1344;Dbxref=Genbank:WP_048875484.1;Name=WP_048875484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007145958.1;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_048875484.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1339530	1339877	.	+	.	ID=gene1345;Name=CleRt_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06270;old_locus_tag=CleRT_12280
NZ_CP011126.1	Protein Homology	CDS	1339530	1339877	.	+	0	ID=cds1305;Parent=gene1345;Dbxref=Genbank:WP_048875485.1;Name=WP_048875485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771383.1;product=50S ribosomal protein L19;protein_id=WP_048875485.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1339899	1340390	.	+	.	ID=gene1346;Name=CleRt_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06275;old_locus_tag=CleRT_12290
NZ_CP011126.1	Protein Homology	CDS	1339899	1340390	.	+	0	ID=cds1306;Parent=gene1346;Dbxref=Genbank:WP_048875486.1;Name=WP_048875486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771385.1;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_048875486.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1340417	1341718	.	-	.	ID=gene1347;Name=CleRt_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06280;old_locus_tag=CleRT_12300
NZ_CP011126.1	Protein Homology	CDS	1340417	1341718	.	-	0	ID=cds1307;Parent=gene1347;Dbxref=Genbank:WP_048875487.1;Name=WP_048875487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997192.1;product=MFS transporter;protein_id=WP_048875487.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1341801	1342559	.	+	.	ID=gene1348;Name=CleRt_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06285;old_locus_tag=CleRT_12310
NZ_CP011126.1	Protein Homology	CDS	1341801	1342559	.	+	0	ID=cds1308;Parent=gene1348;Dbxref=Genbank:WP_048875812.1;Name=WP_048875812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771649.1;product=folate-binding protein;protein_id=WP_048875812.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1342753	1344264	.	-	.	ID=gene1349;Name=CleRt_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06290;old_locus_tag=CleRT_12320
NZ_CP011126.1	Protein Homology	CDS	1342753	1344264	.	-	0	ID=cds1309;Parent=gene1349;Dbxref=Genbank:WP_082160455.1;Name=WP_082160455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771651.1;product=lysine--tRNA ligase;protein_id=WP_082160455.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1344330	1345394	.	-	.	ID=gene1350;Name=CleRt_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06295;old_locus_tag=CleRT_12330
NZ_CP011126.1	Protein Homology	CDS	1344330	1345394	.	-	0	ID=cds1310;Parent=gene1350;Dbxref=Genbank:WP_082160456.1;Name=WP_082160456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017377814.1;product=peptide chain release factor 2;protein_id=WP_082160456.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1345438	1345638	.	-	.	ID=gene1351;Name=CleRt_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06300;old_locus_tag=CleRT_12340
NZ_CP011126.1	Protein Homology	CDS	1345438	1345638	.	-	0	ID=cds1311;Parent=gene1351;Dbxref=Genbank:WP_048875814.1;Name=WP_048875814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771938.1;product=DUF1289 domain-containing protein;protein_id=WP_048875814.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1346219	1346590	.	+	.	ID=gene1352;Name=CleRt_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06305
NZ_CP011126.1	GeneMarkS+	CDS	1346219	1346590	.	+	0	ID=cds1312;Parent=gene1352;Dbxref=Genbank:WP_048875489.1;Name=WP_048875489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875489.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1346587	1346853	.	+	.	ID=gene1353;Name=CleRt_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06310
NZ_CP011126.1	GeneMarkS+	CDS	1346587	1346853	.	+	0	ID=cds1313;Parent=gene1353;Dbxref=Genbank:WP_048875490.1;Name=WP_048875490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=APC family permease;protein_id=WP_048875490.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1347344	1348132	.	+	.	ID=gene1354;Name=CleRt_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06315;old_locus_tag=CleRT_12360
NZ_CP011126.1	Protein Homology	CDS	1347344	1348132	.	+	0	ID=cds1314;Parent=gene1354;Dbxref=Genbank:WP_048875491.1;Name=WP_048875491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220211.1;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_048875491.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1348146	1348913	.	+	.	ID=gene1355;Name=CleRt_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06320;old_locus_tag=CleRT_12370
NZ_CP011126.1	Protein Homology	CDS	1348146	1348913	.	+	0	ID=cds1315;Parent=gene1355;Dbxref=Genbank:WP_048875492.1;Name=WP_048875492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997198.1;product=pantoate--beta-alanine ligase;protein_id=WP_048875492.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1348922	1349402	.	+	.	ID=gene1356;Name=CleRt_RS09260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09260;old_locus_tag=CleRT_12380;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1348922	1349402	.	+	0	ID=cds1316;Parent=gene1356;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771942.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1349588	1349731	.	+	.	ID=gene1357;Name=CleRt_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09265
NZ_CP011126.1	Protein Homology	CDS	1349588	1349731	.	+	0	ID=cds1317;Parent=gene1357;Dbxref=Genbank:WP_082160457.1;Name=WP_082160457.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03309.12;product=type III pantothenate kinase;protein_id=WP_082160457.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1349774	1350070	.	+	.	ID=gene1358;Name=CleRt_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06330
NZ_CP011126.1	Protein Homology	CDS	1349774	1350070	.	+	0	ID=cds1318;Parent=gene1358;Dbxref=Genbank:WP_048875494.1;Name=WP_048875494.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00671;product=type III pantothenate kinase;protein_id=WP_048875494.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1350338	1350490	.	+	.	ID=gene1359;Name=CleRt_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09270
NZ_CP011126.1	Protein Homology	CDS	1350338	1350490	.	+	0	ID=cds1319;Parent=gene1359;Dbxref=Genbank:WP_082160510.1;Name=WP_082160510.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04183.10;product=hypothetical protein;protein_id=WP_082160510.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1350857	1351198	.	+	.	ID=gene1360;Name=CleRt_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09275
NZ_CP011126.1	Protein Homology	CDS	1350857	1351198	.	+	0	ID=cds1320;Parent=gene1360;Dbxref=Genbank:WP_082160458.1;Name=WP_082160458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04183.10;product=hypothetical protein;protein_id=WP_082160458.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1351164	1351325	.	+	.	ID=gene1361;Name=CleRt_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09280
NZ_CP011126.1	Protein Homology	CDS	1351164	1351325	.	+	0	ID=cds1321;Parent=gene1361;Dbxref=Genbank:WP_082160511.1;Name=WP_082160511.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF06276.10;product=ferric iron reductase;protein_id=WP_082160511.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1351911	1352392	.	+	.	ID=gene1362;Name=CleRt_RS06340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06340;old_locus_tag=CleRT_12410;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1351911	1352392	.	+	0	ID=cds1322;Parent=gene1362;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570335.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1353451	1353774	.	-	.	ID=gene1363;Name=CleRt_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09285
NZ_CP011126.1	Protein Homology	CDS	1353451	1353774	.	-	0	ID=cds1323;Parent=gene1363;Dbxref=Genbank:WP_082160459.1;Name=WP_082160459.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00155.19;product=hypothetical protein;protein_id=WP_082160459.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1353850	1354245	.	-	.	ID=gene1364;Name=CleRt_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06345
NZ_CP011126.1	Protein Homology	CDS	1353850	1354245	.	-	0	ID=cds1324;Parent=gene1364;Dbxref=Genbank:WP_082160460.1;Name=WP_082160460.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00155.19;product=hypothetical protein;protein_id=WP_082160460.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1354540	1354615	.	-	.	ID=gene1365;Name=CleRt_RS06350;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS06350;old_locus_tag=CleRT_t038
NZ_CP011126.1	tRNAscan-SE	tRNA	1354540	1354615	.	-	.	ID=rna40;Parent=gene1365;anticodon=(pos:complement(1354580..1354582));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Lys
NZ_CP011126.1	tRNAscan-SE	exon	1354540	1354615	.	-	.	ID=id41;Parent=rna40;anticodon=(pos:complement(1354580..1354582));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Lys
NZ_CP011126.1	RefSeq	gene	1355164	1355658	.	-	.	ID=gene1366;Name=CleRt_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06355;old_locus_tag=CleRT_12450
NZ_CP011126.1	Protein Homology	CDS	1355164	1355658	.	-	0	ID=cds1325;Parent=gene1366;Dbxref=Genbank:WP_048875497.1;Name=WP_048875497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772479.1;product=lipoprotein signal peptidase;protein_id=WP_048875497.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1355722	1358532	.	-	.	ID=gene1367;Name=CleRt_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06360;old_locus_tag=CleRT_12460
NZ_CP011126.1	Protein Homology	CDS	1355722	1358532	.	-	0	ID=cds1326;Parent=gene1367;Dbxref=Genbank:WP_048875498.1;Name=WP_048875498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957549.1;product=isoleucine--tRNA ligase;protein_id=WP_048875498.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1358525	1359196	.	-	.	ID=gene1368;Name=CleRt_RS06365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06365;old_locus_tag=CleRT_12470;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1358525	1359196	.	-	0	ID=cds1327;Parent=gene1368;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220200.1;product=DUF2807 domain-containing protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1359308	1360234	.	-	.	ID=gene1369;Name=CleRt_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06370;old_locus_tag=CleRT_12480
NZ_CP011126.1	Protein Homology	CDS	1359308	1360234	.	-	0	ID=cds1328;Parent=gene1369;Dbxref=Genbank:WP_048875815.1;Name=WP_048875815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771967.1;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_048875815.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1360239	1361786	.	-	.	ID=gene1370;Name=CleRt_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06375;old_locus_tag=CleRT_12490
NZ_CP011126.1	Protein Homology	CDS	1360239	1361786	.	-	0	ID=cds1329;Parent=gene1370;Dbxref=Genbank:WP_048875499.1;Name=WP_048875499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957545.1;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_048875499.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1361905	1362171	.	+	.	ID=gene1371;Name=CleRt_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06380;old_locus_tag=CleRT_12500
NZ_CP011126.1	Protein Homology	CDS	1361905	1362171	.	+	0	ID=cds1330;Parent=gene1371;Dbxref=Genbank:WP_048875500.1;Name=WP_048875500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771970.1;product=30S ribosomal protein S20;protein_id=WP_048875500.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1362223	1363245	.	-	.	ID=gene1372;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=CleRt_RS06385;old_locus_tag=CleRT_12510
NZ_CP011126.1	Protein Homology	CDS	1362223	1363245	.	-	0	ID=cds1331;Parent=gene1372;Dbxref=Genbank:WP_048875501.1;Name=WP_048875501.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012486140.1;product=GTPase ObgE;protein_id=WP_048875501.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1363388	1363654	.	-	.	ID=gene1373;Name=CleRt_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06390;old_locus_tag=CleRT_12520
NZ_CP011126.1	Protein Homology	CDS	1363388	1363654	.	-	0	ID=cds1332;Parent=gene1373;Dbxref=Genbank:WP_048875502.1;Name=WP_048875502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010598161.1;product=50S ribosomal protein L27;protein_id=WP_048875502.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1363644	1363997	.	-	.	ID=gene1374;Name=CleRt_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06395;old_locus_tag=CleRT_12530
NZ_CP011126.1	Protein Homology	CDS	1363644	1363997	.	-	0	ID=cds1333;Parent=gene1374;Dbxref=Genbank:WP_048875503.1;Name=WP_048875503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220194.1;product=50S ribosomal protein L21;protein_id=WP_048875503.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1364140	1365144	.	+	.	ID=gene1375;Name=CleRt_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06400;old_locus_tag=CleRT_12540
NZ_CP011126.1	Protein Homology	CDS	1364140	1365144	.	+	0	ID=cds1334;Parent=gene1375;Dbxref=Genbank:WP_048875504.1;Name=WP_048875504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570349.1;product=octaprenyl diphosphate synthase;protein_id=WP_048875504.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1368525	1369621	.	-	.	ID=gene1376;Name=CleRt_RS09290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09290;old_locus_tag=CleRT_12580;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1368525	1369621	.	-	0	ID=cds1335;Parent=gene1376;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220185.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1369764	1370462	.	+	.	ID=gene1377;Name=CleRt_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06410;old_locus_tag=CleRT_12590
NZ_CP011126.1	Protein Homology	CDS	1369764	1370462	.	+	0	ID=cds1336;Parent=gene1377;Dbxref=Genbank:WP_048875506.1;Name=WP_048875506.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020207585.1;product=DNA-binding response regulator;protein_id=WP_048875506.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1370446	1371198	.	+	.	ID=gene1378;Name=CleRt_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06415;old_locus_tag=CleRT_12600
NZ_CP011126.1	Protein Homology	CDS	1370446	1371198	.	+	0	ID=cds1337;Parent=gene1378;Dbxref=Genbank:WP_048875507.1;Name=WP_048875507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769133.1;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_048875507.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1371321	1372685	.	+	.	ID=gene1379;Name=CleRt_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06420;old_locus_tag=CleRT_12610
NZ_CP011126.1	Protein Homology	CDS	1371321	1372685	.	+	0	ID=cds1338;Parent=gene1379;Dbxref=Genbank:WP_048875508.1;Name=WP_048875508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012812084.1;product=MFS transporter;protein_id=WP_048875508.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1372744	1374269	.	-	.	ID=gene1380;Name=CleRt_RS06425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06425;old_locus_tag=CleRT_12620;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1372744	1374269	.	-	0	ID=cds1339;Parent=gene1380;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769158.1;product=amino acid permease;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1375352	1376190	.	+	.	ID=gene1381;Name=CleRt_RS06430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06430;old_locus_tag=CleRT_12640;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1375352	1376190	.	+	0	ID=cds1340;Parent=gene1381;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570365.1;product=protease SohB;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1376359	1377252	.	+	.	ID=gene1382;Name=CleRt_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06435;old_locus_tag=CleRT_12650
NZ_CP011126.1	Protein Homology	CDS	1376359	1377252	.	+	0	ID=cds1341;Parent=gene1382;Dbxref=Genbank:WP_048875509.1;Name=WP_048875509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997240.1;product=cation transporter;protein_id=WP_048875509.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1377366	1377661	.	+	.	ID=gene1383;Name=CleRt_RS06440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06440;old_locus_tag=CleRT_12660;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1377366	1377661	.	+	0	ID=cds1342;Parent=gene1383;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772416.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1377624	1378370	.	+	.	ID=gene1384;Name=CleRt_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06445;old_locus_tag=CleRT_12670
NZ_CP011126.1	Protein Homology	CDS	1377624	1378370	.	+	0	ID=cds1343;Parent=gene1384;Dbxref=Genbank:WP_082160461.1;Name=WP_082160461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997241.1;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_082160461.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1378363	1379031	.	+	.	ID=gene1385;Name=CleRt_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06450;old_locus_tag=CleRT_12680
NZ_CP011126.1	Protein Homology	CDS	1378363	1379031	.	+	0	ID=cds1344;Parent=gene1385;Dbxref=Genbank:WP_048875511.1;Name=WP_048875511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570368.1;product=phosphoglycolate phosphatase;protein_id=WP_048875511.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1379152	1380275	.	+	.	ID=gene1386;Name=CleRt_RS06455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06455;old_locus_tag=CleRT_12690;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1379152	1380275	.	+	0	ID=cds1345;Parent=gene1386;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772424.1;product=MFS transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1380327	1381309	.	+	.	ID=gene1387;Name=CleRt_RS06460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06460;old_locus_tag=CleRT_12700;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1380327	1381309	.	+	0	ID=cds1346;Parent=gene1387;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772401.1;product=6-phosphofructokinase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1381325	1383958	.	-	.	ID=gene1388;Name=CleRt_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06465;old_locus_tag=CleRT_12710
NZ_CP011126.1	Protein Homology	CDS	1381325	1383958	.	-	0	ID=cds1347;Parent=gene1388;Dbxref=Genbank:WP_048875512.1;Name=WP_048875512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220172.1;product=aminopeptidase N;protein_id=WP_048875512.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1384228	1384536	.	+	.	ID=gene1389;Name=CleRt_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06470;old_locus_tag=CleRT_12720
NZ_CP011126.1	Protein Homology	CDS	1384228	1384536	.	+	0	ID=cds1348;Parent=gene1389;Dbxref=Genbank:WP_053097921.1;Name=WP_053097921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957513.1;product=DNA-binding transcriptional regulator Fis;protein_id=WP_053097921.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1384588	1385943	.	+	.	ID=gene1390;Name=CleRt_RS09295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09295;old_locus_tag=CleRT_12730;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1384588	1385943	.	+	0	ID=cds1349;Parent=gene1390;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220171.1;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1385991	1386486	.	-	.	ID=gene1391;Name=CleRt_RS09300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09300;old_locus_tag=CleRT_12740;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1385991	1386486	.	-	0	ID=cds1350;Parent=gene1391;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769199.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1386584	1386820	.	-	.	ID=gene1392;Name=CleRt_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06480
NZ_CP011126.1	GeneMarkS+	CDS	1386584	1386820	.	-	0	ID=cds1351;Parent=gene1392;Dbxref=Genbank:WP_048875513.1;Name=WP_048875513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875513.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1387130	1388537	.	-	.	ID=gene1393;Name=CleRt_RS06485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06485;old_locus_tag=CleRT_12750;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1387130	1388537	.	-	0	ID=cds1352;Parent=gene1393;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957510.1;product=thiamine-phosphate pyrophosphorylase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1388554	1389194	.	-	.	ID=gene1394;Name=CleRt_RS09305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09305;old_locus_tag=CleRT_12760;partial=true;pseudo=true;start_range=.,1388554
NZ_CP011126.1	Protein Homology	CDS	1388554	1389194	.	-	0	ID=cds1353;Parent=gene1394;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769203.1;partial=true;product=thiazole synthase;pseudo=true;start_range=.,1388554;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1389366	1390434	.	-	.	ID=gene1395;Name=CleRt_RS06495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06495;old_locus_tag=CleRT_12770;partial=true;pseudo=true;start_range=.,1389366
NZ_CP011126.1	Protein Homology	CDS	1389366	1390434	.	-	0	ID=cds1354;Parent=gene1395;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957508.1;partial=true;product=glycine oxidase ThiO;pseudo=true;start_range=.,1389366;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1390517	1392058	.	-	.	ID=gene1396;Name=CleRt_RS06500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06500;old_locus_tag=CleRT_12780;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1390517	1392058	.	-	0	ID=cds1355;Parent=gene1396;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019364029.1;product=phosphomethylpyrimidine synthase;pseudo=true;transl_table=11
NZ_CP011126.1	cmsearch	riboswitch	1392098	1392193	.	-	.	ID=id42;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch
NZ_CP011126.1	RefSeq	gene	1392820	1393032	.	-	.	ID=gene1397;Name=CleRt_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06510
NZ_CP011126.1	GeneMarkS+	CDS	1392820	1393032	.	-	0	ID=cds1356;Parent=gene1397;Dbxref=Genbank:WP_048875515.1;Name=WP_048875515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875515.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1393291	1394552	.	+	.	ID=gene1398;Name=CleRt_RS06515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06515;old_locus_tag=CleRT_12800;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1393291	1394552	.	+	0	ID=cds1357;Parent=gene1398;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769216.1;product=phosphoribosylamine--glycine ligase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1394574	1396262	.	-	.	ID=gene1399;Name=CleRt_RS06520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06520;old_locus_tag=CleRT_12810;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1394574	1396262	.	-	0	ID=cds1358;Parent=gene1399;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570666.1;product=acyl-CoA synthetase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1396278	1396526	.	-	.	ID=gene1400;Name=CleRt_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06525;old_locus_tag=CleRT_12820
NZ_CP011126.1	Protein Homology	CDS	1396278	1396526	.	-	0	ID=cds1359;Parent=gene1400;Dbxref=Genbank:WP_048875817.1;Name=WP_048875817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769222.1;product=acyl carrier protein;protein_id=WP_048875817.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1396530	1397400	.	-	.	ID=gene1401;Name=CleRt_RS06530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06530;old_locus_tag=CleRT_12830;partial=true;pseudo=true;start_range=.,1396530
NZ_CP011126.1	Protein Homology	CDS	1396530	1397400	.	-	0	ID=cds1360;Parent=gene1401;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769224.1;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1396530;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1397636	1398400	.	+	.	ID=gene1402;Name=CleRt_RS09310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09310;old_locus_tag=CleRT_12840;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1397636	1398400	.	+	0	ID=cds1361;Parent=gene1402;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570380.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1398582	1398836	.	+	.	ID=gene1403;Name=CleRt_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06545
NZ_CP011126.1	GeneMarkS+	CDS	1398582	1398836	.	+	0	ID=cds1362;Parent=gene1403;Dbxref=Genbank:WP_048875518.1;Name=WP_048875518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875518.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1399119	1399307	.	+	.	ID=gene1404;Name=CleRt_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09315
NZ_CP011126.1	Protein Homology	CDS	1399119	1399307	.	+	0	ID=cds1363;Parent=gene1404;Dbxref=Genbank:WP_082160462.1;Name=WP_082160462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF14331.4;product=hypothetical protein;protein_id=WP_082160462.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1399441	1399764	.	+	.	ID=gene1405;Name=CleRt_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06550
NZ_CP011126.1	GeneMarkS+	CDS	1399441	1399764	.	+	0	ID=cds1364;Parent=gene1405;Dbxref=Genbank:WP_048875519.1;Name=WP_048875519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875519.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1400284	1400481	.	+	.	ID=gene1406;Name=CleRt_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06555
NZ_CP011126.1	GeneMarkS+	CDS	1400284	1400481	.	+	0	ID=cds1365;Parent=gene1406;Dbxref=Genbank:WP_048875520.1;Name=WP_048875520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875520.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1401511	1402166	.	+	.	ID=gene1407;Name=CleRt_RS09320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09320;old_locus_tag=CleRT_12860;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1401511	1402166	.	+	0	ID=cds1366;Parent=gene1407;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570381.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1402174	1402881	.	-	.	ID=gene1408;Name=CleRt_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06560;old_locus_tag=CleRT_12870
NZ_CP011126.1	Protein Homology	CDS	1402174	1402881	.	-	0	ID=cds1367;Parent=gene1408;Dbxref=Genbank:WP_048875521.1;Name=WP_048875521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769234.1;product=DNA polymerase III subunit epsilon;protein_id=WP_048875521.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1402898	1403350	.	-	.	ID=gene1409;Name=CleRt_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06565;old_locus_tag=CleRT_12880
NZ_CP011126.1	Protein Homology	CDS	1402898	1403350	.	-	0	ID=cds1368;Parent=gene1409;Dbxref=Genbank:WP_082160463.1;Name=WP_082160463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769237.1;product=ribonuclease HI;protein_id=WP_082160463.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1403344	1404075	.	-	.	ID=gene1410;Name=CleRt_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06570;old_locus_tag=CleRT_12890
NZ_CP011126.1	Protein Homology	CDS	1403344	1404075	.	-	0	ID=cds1369;Parent=gene1410;Dbxref=Genbank:WP_048875818.1;Name=WP_048875818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220164.1;product=class I SAM-dependent methyltransferase;protein_id=WP_048875818.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1404849	1406303	.	+	.	ID=gene1411;Name=CleRt_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06580;old_locus_tag=CleRT_12910
NZ_CP011126.1	Protein Homology	CDS	1404849	1406303	.	+	0	ID=cds1370;Parent=gene1411;Dbxref=Genbank:WP_048875523.1;Name=WP_048875523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769245.1;product=lytic transglycosylase;protein_id=WP_048875523.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1406364	1407215	.	+	.	ID=gene1412;Name=CleRt_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06585;old_locus_tag=CleRT_12920
NZ_CP011126.1	Protein Homology	CDS	1406364	1407215	.	+	0	ID=cds1371;Parent=gene1412;Dbxref=Genbank:WP_048875524.1;Name=WP_048875524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013715273.1;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_048875524.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1407291	1408056	.	-	.	ID=gene1413;Name=CleRt_RS09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09325;old_locus_tag=CleRT_12930;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1407291	1408056	.	-	0	ID=cds1372;Parent=gene1413;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957496.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1408299	1410194	.	-	.	ID=gene1414;Name=CleRt_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06595;old_locus_tag=CleRT_12940
NZ_CP011126.1	Protein Homology	CDS	1408299	1410194	.	-	0	ID=cds1373;Parent=gene1414;Dbxref=Genbank:WP_048875526.1;Name=WP_048875526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997264.1;product=molecular chaperone HtpG;protein_id=WP_048875526.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1410303	1410977	.	-	.	ID=gene1415;Name=CleRt_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06600;old_locus_tag=CleRT_12950
NZ_CP011126.1	Protein Homology	CDS	1410303	1410977	.	-	0	ID=cds1374;Parent=gene1415;Dbxref=Genbank:WP_048875527.1;Name=WP_048875527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570389.1;product=membrane protein;protein_id=WP_048875527.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1411404	1413485	.	-	.	ID=gene1416;Name=CleRt_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06605;old_locus_tag=CleRT_12960
NZ_CP011126.1	Protein Homology	CDS	1411404	1413485	.	-	0	ID=cds1375;Parent=gene1416;Dbxref=Genbank:WP_048875528.1;Name=WP_048875528.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007021767.1;product=DNA helicase RecG;protein_id=WP_048875528.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1413492	1413875	.	-	.	ID=gene1417;Name=CleRt_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06610;old_locus_tag=CleRT_12970
NZ_CP011126.1	Protein Homology	CDS	1413492	1413875	.	-	0	ID=cds1376;Parent=gene1417;Dbxref=Genbank:WP_048875529.1;Name=WP_048875529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220159.1;product=endoribonuclease;protein_id=WP_048875529.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1413900	1416023	.	-	.	ID=gene1418;Name=CleRt_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06615;old_locus_tag=CleRT_12980
NZ_CP011126.1	Protein Homology	CDS	1413900	1416023	.	-	0	ID=cds1377;Parent=gene1418;Dbxref=Genbank:WP_048875530.1;Name=WP_048875530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957490.1;product=(p)ppGpp synthetase;protein_id=WP_048875530.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1416057	1416344	.	-	.	ID=gene1419;Name=CleRt_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06620;old_locus_tag=CleRT_12990
NZ_CP011126.1	Protein Homology	CDS	1416057	1416344	.	-	0	ID=cds1378;Parent=gene1419;Dbxref=Genbank:WP_048875531.1;Name=WP_048875531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010132103.1;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_048875531.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1416399	1417028	.	-	.	ID=gene1420;Name=CleRt_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06625;old_locus_tag=CleRT_13000
NZ_CP011126.1	Protein Homology	CDS	1416399	1417028	.	-	0	ID=cds1379;Parent=gene1420;Dbxref=Genbank:WP_048875532.1;Name=WP_048875532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771415.1;product=guanylate kinase;protein_id=WP_048875532.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1417040	1417369	.	-	.	ID=gene1421;Name=CleRt_RS09330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09330;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1417040	1417369	.	-	0	ID=cds1380;Parent=gene1421;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007161417.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1417554	1417778	.	-	.	ID=gene1422;Name=CleRt_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09335
NZ_CP011126.1	Protein Homology	CDS	1417554	1417778	.	-	0	ID=cds1381;Parent=gene1422;Dbxref=Genbank:WP_082160464.1;Name=WP_082160464.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF03755.11;product=hypothetical protein;protein_id=WP_082160464.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1418082	1418801	.	+	.	ID=gene1423;Name=CleRt_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06635;old_locus_tag=CleRT_13020
NZ_CP011126.1	Protein Homology	CDS	1418082	1418801	.	+	0	ID=cds1382;Parent=gene1423;Dbxref=Genbank:WP_048875533.1;Name=WP_048875533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020582125.1;product=ribonuclease PH;protein_id=WP_048875533.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1418855	1419643	.	+	.	ID=gene1424;Name=CleRt_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06640;old_locus_tag=CleRT_13030
NZ_CP011126.1	Protein Homology	CDS	1418855	1419643	.	+	0	ID=cds1383;Parent=gene1424;Dbxref=Genbank:WP_048875819.1;Name=WP_048875819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997269.1;product=glutamate racemase;protein_id=WP_048875819.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1419699	1420466	.	-	.	ID=gene1425;Name=CleRt_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06645;old_locus_tag=CleRT_13040
NZ_CP011126.1	Protein Homology	CDS	1419699	1420466	.	-	0	ID=cds1384;Parent=gene1425;Dbxref=Genbank:WP_048875534.1;Name=WP_048875534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020158161.1;product=exodeoxyribonuclease III;protein_id=WP_048875534.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1420565	1421191	.	+	.	ID=gene1426;Name=CleRt_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06650;old_locus_tag=CleRT_13050
NZ_CP011126.1	Protein Homology	CDS	1420565	1421191	.	+	0	ID=cds1385;Parent=gene1426;Dbxref=Genbank:WP_048875535.1;Name=WP_048875535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771427.1;product=orotate phosphoribosyltransferase;protein_id=WP_048875535.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1421188	1422588	.	-	.	ID=gene1427;Name=CleRt_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06655;old_locus_tag=CleRT_13060
NZ_CP011126.1	Protein Homology	CDS	1421188	1422588	.	-	0	ID=cds1386;Parent=gene1427;Dbxref=Genbank:WP_048875820.1;Name=WP_048875820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003242532.1;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_048875820.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1422584	1423042	.	-	.	ID=gene1428;Name=CleRt_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06660;old_locus_tag=CleRT_13070
NZ_CP011126.1	Protein Homology	CDS	1422584	1423042	.	-	0	ID=cds1387;Parent=gene1428;Dbxref=Genbank:WP_048875536.1;Name=WP_048875536.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771437.1;product=dUTP diphosphatase;protein_id=WP_048875536.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1423397	1423669	.	+	.	ID=gene1429;Name=CleRt_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09340
NZ_CP011126.1	GeneMarkS+	CDS	1423397	1423669	.	+	0	ID=cds1388;Parent=gene1429;Dbxref=Genbank:WP_082160465.1;Name=WP_082160465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160465.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1423657	1423920	.	+	.	ID=gene1430;Name=CleRt_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09345
NZ_CP011126.1	Protein Homology	CDS	1423657	1423920	.	+	0	ID=cds1389;Parent=gene1430;Dbxref=Genbank:WP_082160466.1;Name=WP_082160466.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04002.13;product=hypothetical protein;protein_id=WP_082160466.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1424067	1424303	.	+	.	ID=gene1431;Name=CleRt_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06670;old_locus_tag=CleRT_13090
NZ_CP011126.1	Protein Homology	CDS	1424067	1424303	.	+	0	ID=cds1390;Parent=gene1431;Dbxref=Genbank:WP_048875537.1;Name=WP_048875537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771445.1;product=50S ribosomal protein L28;protein_id=WP_048875537.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1424324	1424536	.	+	.	ID=gene1432;Name=CleRt_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06675;old_locus_tag=CleRT_13100
NZ_CP011126.1	Protein Homology	CDS	1424324	1424536	.	+	0	ID=cds1391;Parent=gene1432;Dbxref=Genbank:WP_048875538.1;Name=WP_048875538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771448.1;product=50S ribosomal protein L33;protein_id=WP_048875538.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1424588	1424836	.	-	.	ID=gene1433;Name=CleRt_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06680;old_locus_tag=CleRT_13110
NZ_CP011126.1	Protein Homology	CDS	1424588	1424836	.	-	0	ID=cds1392;Parent=gene1433;Dbxref=Genbank:WP_048875539.1;Name=WP_048875539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015422074.1;product=ferredoxin;protein_id=WP_048875539.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1424848	1425333	.	-	.	ID=gene1434;Name=CleRt_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06685;old_locus_tag=CleRT_13120
NZ_CP011126.1	Protein Homology	CDS	1424848	1425333	.	-	0	ID=cds1393;Parent=gene1434;Dbxref=Genbank:WP_048875540.1;Name=WP_048875540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771452.1;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_048875540.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1425426	1425929	.	-	.	ID=gene1435;Name=CleRt_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06690;old_locus_tag=CleRT_13130
NZ_CP011126.1	Protein Homology	CDS	1425426	1425929	.	-	0	ID=cds1394;Parent=gene1435;Dbxref=Genbank:WP_048875541.1;Name=WP_048875541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005343268.1;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_048875541.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1425932	1427248	.	-	.	ID=gene1436;Name=CleRt_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06695;old_locus_tag=CleRT_13140
NZ_CP011126.1	Protein Homology	CDS	1425932	1427248	.	-	0	ID=cds1395;Parent=gene1436;Dbxref=Genbank:WP_048875542.1;Name=WP_048875542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771456.1;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_048875542.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1427318	1427393	.	+	.	ID=gene1437;Name=CleRt_RS06700;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS06700;old_locus_tag=CleRT_t039
NZ_CP011126.1	tRNAscan-SE	tRNA	1427318	1427393	.	+	.	ID=rna41;Parent=gene1437;anticodon=(pos:1427352..1427354);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Glu
NZ_CP011126.1	tRNAscan-SE	exon	1427318	1427393	.	+	.	ID=id43;Parent=rna41;anticodon=(pos:1427352..1427354);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Glu
NZ_CP011126.1	RefSeq	pseudogene	1427454	1427813	.	-	.	ID=gene1438;Name=CleRt_RS06705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06705;old_locus_tag=CleRT_13150;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1427454	1427813	.	-	0	ID=cds1396;Parent=gene1438;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957481.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1428259	1428518	.	+	.	ID=gene1439;Name=CleRt_RS09350;end_range=1428518,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09350;old_locus_tag=CleRT_13160;partial=true;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1428259	1428518	.	+	0	ID=cds1397;Parent=gene1439;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;end_range=1428518,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220512.1;partial=true;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1428625	1429379	.	-	.	ID=gene1440;Name=CleRt_RS06710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06710;old_locus_tag=CleRT_13170;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1428625	1429379	.	-	0	ID=cds1398;Parent=gene1440;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771470.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1429554	1430405	.	+	.	ID=gene1441;Name=CleRt_RS06715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06715;old_locus_tag=CleRT_13180;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1429554	1430405	.	+	0	ID=cds1399;Parent=gene1441;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220150.1;product=amidinotransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1430417	1431808	.	+	.	ID=gene1442;Name=CleRt_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06720;old_locus_tag=CleRT_13190
NZ_CP011126.1	GeneMarkS+	CDS	1430417	1431808	.	+	0	ID=cds1400;Parent=gene1442;Dbxref=Genbank:WP_048875543.1;Name=WP_048875543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875543.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1431747	1432340	.	-	.	ID=gene1443;Name=CleRt_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06725;old_locus_tag=CleRT_13200
NZ_CP011126.1	Protein Homology	CDS	1431747	1432340	.	-	0	ID=cds1401;Parent=gene1443;Dbxref=Genbank:WP_048875544.1;Name=WP_048875544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220149.1;product=MarC family protein;protein_id=WP_048875544.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1432426	1433574	.	-	.	ID=gene1444;Name=CleRt_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06730;old_locus_tag=CleRT_13210
NZ_CP011126.1	Protein Homology	CDS	1432426	1433574	.	-	0	ID=cds1402;Parent=gene1444;Dbxref=Genbank:WP_048875545.1;Name=WP_048875545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220148.1;product=FAD-dependent oxidoreductase;protein_id=WP_048875545.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1433543	1434626	.	-	.	ID=gene1445;Name=CleRt_RS06735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06735;old_locus_tag=CleRT_13220;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1433543	1434626	.	-	0	ID=cds1403;Parent=gene1445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957475.1;product=uroporphyrinogen decarboxylase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1434932	1437787	.	-	.	ID=gene1446;Name=CleRt_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06740;old_locus_tag=CleRT_13230
NZ_CP011126.1	Protein Homology	CDS	1434932	1437787	.	-	0	ID=cds1404;Parent=gene1446;Dbxref=Genbank:WP_048875546.1;Name=WP_048875546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771479.1;product=excinuclease ABC subunit UvrA;protein_id=WP_048875546.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1437885	1438319	.	-	.	ID=gene1447;Name=CleRt_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06745;old_locus_tag=CleRT_13240
NZ_CP011126.1	GeneMarkS+	CDS	1437885	1438319	.	-	0	ID=cds1405;Parent=gene1447;Dbxref=Genbank:WP_048875547.1;Name=WP_048875547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875547.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1439205	1439698	.	-	.	ID=gene1448;Name=CleRt_RS09355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09355;old_locus_tag=CleRT_13260;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1439205	1439698	.	-	0	ID=cds1406;Parent=gene1448;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012569678.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1440320	1441726	.	+	.	ID=gene1449;Name=CleRt_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06750;old_locus_tag=CleRT_13270
NZ_CP011126.1	Protein Homology	CDS	1440320	1441726	.	+	0	ID=cds1407;Parent=gene1449;Dbxref=Genbank:WP_048875548.1;Name=WP_048875548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957472.1;product=MFS transporter;protein_id=WP_048875548.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1441754	1442218	.	+	.	ID=gene1450;Name=CleRt_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06755;old_locus_tag=CleRT_13280
NZ_CP011126.1	Protein Homology	CDS	1441754	1442218	.	+	0	ID=cds1408;Parent=gene1450;Dbxref=Genbank:WP_048875549.1;Name=WP_048875549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771486.1;product=single-stranded DNA-binding protein;protein_id=WP_048875549.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1442679	1443872	.	-	.	ID=gene1451;Name=CleRt_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06760;old_locus_tag=CleRT_13290
NZ_CP011126.1	Protein Homology	CDS	1442679	1443872	.	-	0	ID=cds1409;Parent=gene1451;Dbxref=Genbank:WP_048875550.1;Name=WP_048875550.1;Note=enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957471.1;product=enoyl-[acyl-carrier-protein] reductase FabV;protein_id=WP_048875550.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1444141	1444494	.	+	.	ID=gene1452;Name=CleRt_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06765
NZ_CP011126.1	GeneMarkS+	CDS	1444141	1444494	.	+	0	ID=cds1410;Parent=gene1452;Dbxref=Genbank:WP_048875551.1;Name=WP_048875551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875551.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1445928	1446215	.	+	.	ID=gene1453;Name=CleRt_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06770;old_locus_tag=CleRT_13310
NZ_CP011126.1	GeneMarkS+	CDS	1445928	1446215	.	+	0	ID=cds1411;Parent=gene1453;Dbxref=Genbank:WP_048875552.1;Name=WP_048875552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875552.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1447011	1448296	.	-	.	ID=gene1454;Name=CleRt_RS06775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06775;old_locus_tag=CleRT_13320;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1447011	1448296	.	-	0	ID=cds1412;Parent=gene1454;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771492.1;product=glucose/galactose MFS transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1448300	1448686	.	-	.	ID=gene1455;Name=CleRt_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06780;old_locus_tag=CleRT_13330
NZ_CP011126.1	Protein Homology	CDS	1448300	1448686	.	-	0	ID=cds1413;Parent=gene1455;Dbxref=Genbank:WP_048875553.1;Name=WP_048875553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013331017.1;product=50S ribosomal protein L17;protein_id=WP_048875553.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1448690	1449673	.	-	.	ID=gene1456;Name=CleRt_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06785;old_locus_tag=CleRT_13340
NZ_CP011126.1	Protein Homology	CDS	1448690	1449673	.	-	0	ID=cds1414;Parent=gene1456;Dbxref=Genbank:WP_048875554.1;Name=WP_048875554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901544.1;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_048875554.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1449686	1450306	.	-	.	ID=gene1457;Name=CleRt_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06790;old_locus_tag=CleRT_13350
NZ_CP011126.1	Protein Homology	CDS	1449686	1450306	.	-	0	ID=cds1415;Parent=gene1457;Dbxref=Genbank:WP_048875555.1;Name=WP_048875555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004580768.1;product=30S ribosomal protein S4;protein_id=WP_048875555.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1450321	1450692	.	-	.	ID=gene1458;Name=CleRt_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06795;old_locus_tag=CleRT_13360
NZ_CP011126.1	Protein Homology	CDS	1450321	1450692	.	-	0	ID=cds1416;Parent=gene1458;Dbxref=Genbank:WP_048875556.1;Name=WP_048875556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771499.1;product=30S ribosomal protein S11;protein_id=WP_048875556.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1450714	1451073	.	-	.	ID=gene1459;Name=CleRt_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06800;old_locus_tag=CleRT_13370
NZ_CP011126.1	Protein Homology	CDS	1450714	1451073	.	-	0	ID=cds1417;Parent=gene1459;Dbxref=Genbank:WP_048875557.1;Name=WP_048875557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771503.1;product=30S ribosomal protein S13;protein_id=WP_048875557.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1451253	1451375	.	-	.	ID=gene1460;Name=CleRt_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09360;old_locus_tag=CleRT_13380
NZ_CP011126.1	Protein Homology	CDS	1451253	1451375	.	-	0	ID=cds1418;Parent=gene1460;Dbxref=Genbank:WP_082160467.1;Name=WP_082160467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771506.1;product=50S ribosomal protein L36;protein_id=WP_082160467.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1451396	1452724	.	-	.	ID=gene1461;Name=CleRt_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06805;old_locus_tag=CleRT_13390
NZ_CP011126.1	Protein Homology	CDS	1451396	1452724	.	-	0	ID=cds1419;Parent=gene1461;Dbxref=Genbank:WP_048875558.1;Name=WP_048875558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771508.1;product=preprotein translocase subunit SecY;protein_id=WP_048875558.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1452717	1453151	.	-	.	ID=gene1462;Name=CleRt_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06810;old_locus_tag=CleRT_13400
NZ_CP011126.1	Protein Homology	CDS	1452717	1453151	.	-	0	ID=cds1420;Parent=gene1462;Dbxref=Genbank:WP_048875559.1;Name=WP_048875559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011217143.1;product=50S ribosomal protein L15;protein_id=WP_048875559.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1453153	1453341	.	-	.	ID=gene1463;Name=CleRt_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06815;old_locus_tag=CleRT_13410
NZ_CP011126.1	Protein Homology	CDS	1453153	1453341	.	-	0	ID=cds1421;Parent=gene1463;Dbxref=Genbank:WP_048875560.1;Name=WP_048875560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771513.1;product=50S ribosomal protein L30;protein_id=WP_048875560.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1453345	1453851	.	-	.	ID=gene1464;Name=CleRt_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06820;old_locus_tag=CleRT_13420
NZ_CP011126.1	Protein Homology	CDS	1453345	1453851	.	-	0	ID=cds1422;Parent=gene1464;Dbxref=Genbank:WP_048875561.1;Name=WP_048875561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771515.1;product=30S ribosomal protein S5;protein_id=WP_048875561.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1453863	1454213	.	-	.	ID=gene1465;Name=CleRt_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06825;old_locus_tag=CleRT_13430
NZ_CP011126.1	Protein Homology	CDS	1453863	1454213	.	-	0	ID=cds1423;Parent=gene1465;Dbxref=Genbank:WP_048875562.1;Name=WP_048875562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002215441.1;product=50S ribosomal protein L18;protein_id=WP_048875562.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1454213	1454749	.	-	.	ID=gene1466;Name=CleRt_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06830;old_locus_tag=CleRT_13440
NZ_CP011126.1	Protein Homology	CDS	1454213	1454749	.	-	0	ID=cds1424;Parent=gene1466;Dbxref=Genbank:WP_048875563.1;Name=WP_048875563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253064.1;product=50S ribosomal protein L6;protein_id=WP_048875563.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1454762	1455157	.	-	.	ID=gene1467;Name=CleRt_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06835;old_locus_tag=CleRT_13450
NZ_CP011126.1	Protein Homology	CDS	1454762	1455157	.	-	0	ID=cds1425;Parent=gene1467;Dbxref=Genbank:WP_048875564.1;Name=WP_048875564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020655689.1;product=30S ribosomal protein S8;protein_id=WP_048875564.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1455159	1455458	.	-	.	ID=gene1468;Name=CleRt_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06840;old_locus_tag=CleRT_13460
NZ_CP011126.1	Protein Homology	CDS	1455159	1455458	.	-	0	ID=cds1426;Parent=gene1468;Dbxref=Genbank:WP_048875565.1;Name=WP_048875565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;product=30S ribosomal protein S14;protein_id=WP_048875565.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1455469	1456008	.	-	.	ID=gene1469;Name=CleRt_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06845;old_locus_tag=CleRT_13470
NZ_CP011126.1	Protein Homology	CDS	1455469	1456008	.	-	0	ID=cds1427;Parent=gene1469;Dbxref=Genbank:WP_048875566.1;Name=WP_048875566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220137.1;product=50S ribosomal protein L5;protein_id=WP_048875566.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1456019	1456342	.	-	.	ID=gene1470;Name=CleRt_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06850;old_locus_tag=CleRT_13480
NZ_CP011126.1	Protein Homology	CDS	1456019	1456342	.	-	0	ID=cds1428;Parent=gene1470;Dbxref=Genbank:WP_082160468.1;Name=WP_082160468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771523.1;product=50S ribosomal protein L24;protein_id=WP_082160468.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1456353	1456721	.	-	.	ID=gene1471;Name=CleRt_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06855;old_locus_tag=CleRT_13490
NZ_CP011126.1	Protein Homology	CDS	1456353	1456721	.	-	0	ID=cds1429;Parent=gene1471;Dbxref=Genbank:WP_048875567.1;Name=WP_048875567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;product=50S ribosomal protein L14;protein_id=WP_048875567.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1456732	1456998	.	-	.	ID=gene1472;Name=CleRt_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06860;old_locus_tag=CleRT_13500
NZ_CP011126.1	Protein Homology	CDS	1456732	1456998	.	-	0	ID=cds1430;Parent=gene1472;Dbxref=Genbank:WP_048875568.1;Name=WP_048875568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020290702.1;product=30S ribosomal protein S17;protein_id=WP_048875568.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1456995	1457189	.	-	.	ID=gene1473;Name=CleRt_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06865;old_locus_tag=CleRT_13510
NZ_CP011126.1	Protein Homology	CDS	1456995	1457189	.	-	0	ID=cds1431;Parent=gene1473;Dbxref=Genbank:WP_048875569.1;Name=WP_048875569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771530.1;product=50S ribosomal protein L29;protein_id=WP_048875569.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1457189	1457602	.	-	.	ID=gene1474;Name=CleRt_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06870;old_locus_tag=CleRT_13520
NZ_CP011126.1	Protein Homology	CDS	1457189	1457602	.	-	0	ID=cds1432;Parent=gene1474;Dbxref=Genbank:WP_048875570.1;Name=WP_048875570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003448731.1;product=50S ribosomal protein L16;protein_id=WP_048875570.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1457616	1458308	.	-	.	ID=gene1475;Name=CleRt_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06875;old_locus_tag=CleRT_13530
NZ_CP011126.1	Protein Homology	CDS	1457616	1458308	.	-	0	ID=cds1433;Parent=gene1475;Dbxref=Genbank:WP_048875571.1;Name=WP_048875571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771534.1;product=30S ribosomal protein S3;protein_id=WP_048875571.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1458323	1458658	.	-	.	ID=gene1476;Name=CleRt_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06880;old_locus_tag=CleRT_13540
NZ_CP011126.1	Protein Homology	CDS	1458323	1458658	.	-	0	ID=cds1434;Parent=gene1476;Dbxref=Genbank:WP_048875572.1;Name=WP_048875572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957457.1;product=50S ribosomal protein L22;protein_id=WP_048875572.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1458661	1458942	.	-	.	ID=gene1477;Name=CleRt_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06885;old_locus_tag=CleRT_13550
NZ_CP011126.1	Protein Homology	CDS	1458661	1458942	.	-	0	ID=cds1435;Parent=gene1477;Dbxref=Genbank:WP_048875573.1;Name=WP_048875573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771538.1;product=30S ribosomal protein S19;protein_id=WP_048875573.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1458959	1459783	.	-	.	ID=gene1478;Name=CleRt_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06890;old_locus_tag=CleRT_13560
NZ_CP011126.1	Protein Homology	CDS	1458959	1459783	.	-	0	ID=cds1436;Parent=gene1478;Dbxref=Genbank:WP_048875574.1;Name=WP_048875574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253061.1;product=50S ribosomal protein L2;protein_id=WP_048875574.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1459804	1460091	.	-	.	ID=gene1479;Name=CleRt_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06895;old_locus_tag=CleRT_13570
NZ_CP011126.1	Protein Homology	CDS	1459804	1460091	.	-	0	ID=cds1437;Parent=gene1479;Dbxref=Genbank:WP_048875575.1;Name=WP_048875575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771542.1;product=50S ribosomal protein L23;protein_id=WP_048875575.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1460088	1460705	.	-	.	ID=gene1480;Name=CleRt_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06900;old_locus_tag=CleRT_13580
NZ_CP011126.1	Protein Homology	CDS	1460088	1460705	.	-	0	ID=cds1438;Parent=gene1480;Dbxref=Genbank:WP_048875576.1;Name=WP_048875576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771544.1;product=50S ribosomal protein L4;protein_id=WP_048875576.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1460705	1461358	.	-	.	ID=gene1481;Name=CleRt_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06905;old_locus_tag=CleRT_13590
NZ_CP011126.1	Protein Homology	CDS	1460705	1461358	.	-	0	ID=cds1439;Parent=gene1481;Dbxref=Genbank:WP_048875577.1;Name=WP_048875577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997290.1;product=50S ribosomal protein L3;protein_id=WP_048875577.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1461408	1461743	.	-	.	ID=gene1482;Name=CleRt_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06910;old_locus_tag=CleRT_13600
NZ_CP011126.1	Protein Homology	CDS	1461408	1461743	.	-	0	ID=cds1440;Parent=gene1482;Dbxref=Genbank:WP_048875578.1;Name=WP_048875578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957452.1;product=30S ribosomal protein S10;protein_id=WP_048875578.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1461759	1462952	.	-	.	ID=gene1483;Name=CleRt_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06915;old_locus_tag=CleRT_13610
NZ_CP011126.1	Protein Homology	CDS	1461759	1462952	.	-	0	ID=cds1441;Parent=gene1483;Dbxref=Genbank:WP_048875579.1;Name=WP_048875579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011634842.1;product=elongation factor Tu;protein_id=WP_048875579.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1462972	1465071	.	-	.	ID=gene1484;Name=CleRt_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06920;old_locus_tag=CleRT_13620
NZ_CP011126.1	Protein Homology	CDS	1462972	1465071	.	-	0	ID=cds1442;Parent=gene1484;Dbxref=Genbank:WP_048875580.1;Name=WP_048875580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957451.1;product=elongation factor G;protein_id=WP_048875580.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1465081	1465665	.	-	.	ID=gene1485;Name=CleRt_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06925;old_locus_tag=CleRT_13630
NZ_CP011126.1	Protein Homology	CDS	1465081	1465665	.	-	0	ID=cds1443;Parent=gene1485;Dbxref=Genbank:WP_048875581.1;Name=WP_048875581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771622.1;product=30S ribosomal protein S7;protein_id=WP_048875581.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1465682	1466056	.	-	.	ID=gene1486;Name=CleRt_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06930;old_locus_tag=CleRT_13640
NZ_CP011126.1	Protein Homology	CDS	1465682	1466056	.	-	0	ID=cds1444;Parent=gene1486;Dbxref=Genbank:WP_048875822.1;Name=WP_048875822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012071941.1;product=30S ribosomal protein S12;protein_id=WP_048875822.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1466272	1470492	.	-	.	ID=gene1487;Name=CleRt_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06935;old_locus_tag=CleRT_13650
NZ_CP011126.1	Protein Homology	CDS	1466272	1470492	.	-	0	ID=cds1445;Parent=gene1487;Dbxref=Genbank:WP_048875582.1;Name=WP_048875582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010654838.1;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_048875582.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1470513	1474634	.	-	.	ID=gene1488;Name=CleRt_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06940;old_locus_tag=CleRT_13660
NZ_CP011126.1	Protein Homology	CDS	1470513	1474634	.	-	0	ID=cds1446;Parent=gene1488;Dbxref=Genbank:WP_048875583.1;Name=WP_048875583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771618.1;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_048875583.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1474814	1475197	.	-	.	ID=gene1489;Name=CleRt_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06945;old_locus_tag=CleRT_13670
NZ_CP011126.1	Protein Homology	CDS	1474814	1475197	.	-	0	ID=cds1447;Parent=gene1489;Dbxref=Genbank:WP_048875584.1;Name=WP_048875584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771617.1;product=50S ribosomal protein L7/L12;protein_id=WP_048875584.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1475233	1475760	.	-	.	ID=gene1490;Name=CleRt_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06950;old_locus_tag=CleRT_13680
NZ_CP011126.1	Protein Homology	CDS	1475233	1475760	.	-	0	ID=cds1448;Parent=gene1490;Dbxref=Genbank:WP_048875585.1;Name=WP_048875585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012983541.1;product=50S ribosomal protein L10;protein_id=WP_048875585.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1476035	1476727	.	-	.	ID=gene1491;Name=CleRt_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06955;old_locus_tag=CleRT_13690
NZ_CP011126.1	Protein Homology	CDS	1476035	1476727	.	-	0	ID=cds1449;Parent=gene1491;Dbxref=Genbank:WP_048875586.1;Name=WP_048875586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010960363.1;product=50S ribosomal protein L1;protein_id=WP_048875586.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1476727	1477164	.	-	.	ID=gene1492;Name=CleRt_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06960;old_locus_tag=CleRT_13700
NZ_CP011126.1	Protein Homology	CDS	1476727	1477164	.	-	0	ID=cds1450;Parent=gene1492;Dbxref=Genbank:WP_048875587.1;Name=WP_048875587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014707503.1;product=50S ribosomal protein L11;protein_id=WP_048875587.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1477240	1477950	.	-	.	ID=gene1493;Name=CleRt_RS06965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS06965;old_locus_tag=CleRT_13710;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1477240	1477950	.	-	0	ID=cds1451;Parent=gene1493;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005360293.1;product=transcription termination/antitermination protein NusG;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1478212	1478287	.	-	.	ID=gene1494;Name=CleRt_RS06975;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS06975;old_locus_tag=CleRT_t040
NZ_CP011126.1	tRNAscan-SE	tRNA	1478212	1478287	.	-	.	ID=rna42;Parent=gene1494;anticodon=(pos:complement(1478252..1478254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Trp
NZ_CP011126.1	tRNAscan-SE	exon	1478212	1478287	.	-	.	ID=id44;Parent=rna42;anticodon=(pos:complement(1478252..1478254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Trp
NZ_CP011126.1	RefSeq	gene	1478329	1479522	.	-	.	ID=gene1495;Name=CleRt_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS06980;old_locus_tag=CleRT_13730
NZ_CP011126.1	Protein Homology	CDS	1478329	1479522	.	-	0	ID=cds1452;Parent=gene1495;Dbxref=Genbank:WP_048875579.1;Name=WP_048875579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011634842.1;product=elongation factor Tu;protein_id=WP_048875579.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1479577	1479652	.	-	.	ID=gene1496;Name=CleRt_RS06985;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS06985;old_locus_tag=CleRT_t041
NZ_CP011126.1	tRNAscan-SE	tRNA	1479577	1479652	.	-	.	ID=rna43;Parent=gene1496;anticodon=(pos:complement(1479617..1479619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Thr
NZ_CP011126.1	tRNAscan-SE	exon	1479577	1479652	.	-	.	ID=id45;Parent=rna43;anticodon=(pos:complement(1479617..1479619));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Thr
NZ_CP011126.1	RefSeq	gene	1479652	1479725	.	-	.	ID=gene1497;Name=CleRt_RS06990;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS06990;old_locus_tag=CleRT_t042
NZ_CP011126.1	tRNAscan-SE	tRNA	1479652	1479725	.	-	.	ID=rna44;Parent=gene1497;anticodon=(pos:complement(1479691..1479693));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Gly
NZ_CP011126.1	tRNAscan-SE	exon	1479652	1479725	.	-	.	ID=id46;Parent=rna44;anticodon=(pos:complement(1479691..1479693));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Gly
NZ_CP011126.1	RefSeq	gene	1479833	1479914	.	-	.	ID=gene1498;Name=CleRt_RS06995;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS06995;old_locus_tag=CleRT_t043
NZ_CP011126.1	tRNAscan-SE	tRNA	1479833	1479914	.	-	.	ID=rna45;Parent=gene1498;anticodon=(pos:complement(1479878..1479880));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Tyr
NZ_CP011126.1	tRNAscan-SE	exon	1479833	1479914	.	-	.	ID=id47;Parent=rna45;anticodon=(pos:complement(1479878..1479880));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Tyr
NZ_CP011126.1	RefSeq	gene	1480135	1480884	.	-	.	ID=gene1499;Name=CleRt_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07000;old_locus_tag=CleRT_13740
NZ_CP011126.1	Protein Homology	CDS	1480135	1480884	.	-	0	ID=cds1453;Parent=gene1499;Dbxref=Genbank:WP_048875590.1;Name=WP_048875590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570417.1;product=phosphopantetheine-protein transferase;protein_id=WP_048875590.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1481161	1481436	.	-	.	ID=gene1500;Name=CleRt_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08450
NZ_CP011126.1	GeneMarkS+	CDS	1481161	1481436	.	-	0	ID=cds1454;Parent=gene1500;Dbxref=Genbank:WP_053097927.1;Name=WP_053097927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097927.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1481503	1481733	.	+	.	ID=gene1501;Name=CleRt_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08455
NZ_CP011126.1	GeneMarkS+	CDS	1481503	1481733	.	+	0	ID=cds1455;Parent=gene1501;Dbxref=Genbank:WP_053097929.1;Name=WP_053097929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097929.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1481924	1483414	.	-	.	ID=gene1502;Name=CleRt_RS09365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09365;old_locus_tag=CleRT_13760;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1481924	1483414	.	-	0	ID=cds1456;Parent=gene1502;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252827.1;product=cytochrome d terminal oxidase subunit 1;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1483575	1484297	.	+	.	ID=gene1503;Name=CleRt_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07015;old_locus_tag=CleRT_13770
NZ_CP011126.1	Protein Homology	CDS	1483575	1484297	.	+	0	ID=cds1457;Parent=gene1503;Dbxref=Genbank:WP_048875592.1;Name=WP_048875592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570421.1;product=BAX inhibitor (BI)-1/YccA family protein;protein_id=WP_048875592.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1484799	1484984	.	-	.	ID=gene1504;Name=CleRt_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07020
NZ_CP011126.1	GeneMarkS+	CDS	1484799	1484984	.	-	0	ID=cds1458;Parent=gene1504;Dbxref=Genbank:WP_048875593.1;Name=WP_048875593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875593.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1485219	1485455	.	-	.	ID=gene1505;Name=CleRt_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07025
NZ_CP011126.1	GeneMarkS+	CDS	1485219	1485455	.	-	0	ID=cds1459;Parent=gene1505;Dbxref=Genbank:WP_048875594.1;Name=WP_048875594.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875594.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1486824	1487078	.	+	.	ID=gene1506;Name=CleRt_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07030
NZ_CP011126.1	GeneMarkS+	CDS	1486824	1487078	.	+	0	ID=cds1460;Parent=gene1506;Dbxref=Genbank:WP_048875595.1;Name=WP_048875595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875595.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1488479	1488682	.	+	.	ID=gene1507;Name=CleRt_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09370
NZ_CP011126.1	Protein Homology	CDS	1488479	1488682	.	+	0	ID=cds1461;Parent=gene1507;Dbxref=Genbank:WP_082160469.1;Name=WP_082160469.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00550.23;product=acyl carrier protein;protein_id=WP_082160469.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1489016	1489279	.	+	.	ID=gene1508;Name=CleRt_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07035
NZ_CP011126.1	Protein Homology	CDS	1489016	1489279	.	+	0	ID=cds1462;Parent=gene1508;Dbxref=Genbank:WP_048875596.1;Name=WP_048875596.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13444.4;product=GNAT family N-acetyltransferase;protein_id=WP_048875596.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1490611	1490683	.	-	.	ID=gene1509;Name=CleRt_RS07040;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS07040;old_locus_tag=CleRT_t044
NZ_CP011126.1	tRNAscan-SE	tRNA	1490611	1490683	.	-	.	ID=rna46;Parent=gene1509;anticodon=(pos:complement(1490648..1490650));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Thr
NZ_CP011126.1	tRNAscan-SE	exon	1490611	1490683	.	-	.	ID=id48;Parent=rna46;anticodon=(pos:complement(1490648..1490650));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Thr
NZ_CP011126.1	RefSeq	gene	1493325	1493564	.	-	.	ID=gene1510;Name=CleRt_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07045
NZ_CP011126.1	GeneMarkS+	CDS	1493325	1493564	.	-	0	ID=cds1463;Parent=gene1510;Dbxref=Genbank:WP_048875597.1;Name=WP_048875597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875597.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1494646	1494948	.	+	.	ID=gene1511;Name=CleRt_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07050;old_locus_tag=CleRT_13820
NZ_CP011126.1	GeneMarkS+	CDS	1494646	1494948	.	+	0	ID=cds1464;Parent=gene1511;Dbxref=Genbank:WP_048875598.1;Name=WP_048875598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875598.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1496162	1496569	.	-	.	ID=gene1512;Name=CleRt_RS09375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09375;old_locus_tag=CleRT_13830;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1496162	1496569	.	-	0	ID=cds1465;Parent=gene1512;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771586.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1496621	1498045	.	-	.	ID=gene1513;Name=CleRt_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07060;old_locus_tag=CleRT_13840
NZ_CP011126.1	Protein Homology	CDS	1496621	1498045	.	-	0	ID=cds1466;Parent=gene1513;Dbxref=Genbank:WP_048875823.1;Name=WP_048875823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220127.1;product=glutamate--tRNA ligase;protein_id=WP_048875823.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1498115	1498413	.	+	.	ID=gene1514;Name=CleRt_RS07065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07065;old_locus_tag=CleRT_13850;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1498115	1498413	.	+	0	ID=cds1467;Parent=gene1514;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771581.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1499148	1500104	.	-	.	ID=gene1515;Name=CleRt_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07075;old_locus_tag=CleRT_13870
NZ_CP011126.1	Protein Homology	CDS	1499148	1500104	.	-	0	ID=cds1468;Parent=gene1515;Dbxref=Genbank:WP_048875600.1;Name=WP_048875600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957432.1;product=type I pantothenate kinase;protein_id=WP_048875600.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1500232	1501965	.	+	.	ID=gene1516;Name=CleRt_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07080;old_locus_tag=CleRT_13880
NZ_CP011126.1	Protein Homology	CDS	1500232	1501965	.	+	0	ID=cds1469;Parent=gene1516;Dbxref=Genbank:WP_048875601.1;Name=WP_048875601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957431.1;product=membrane protein;protein_id=WP_048875601.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1501965	1504805	.	+	.	ID=gene1517;Name=CleRt_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07085;old_locus_tag=CleRT_13890
NZ_CP011126.1	Protein Homology	CDS	1501965	1504805	.	+	0	ID=cds1470;Parent=gene1517;Dbxref=Genbank:WP_048875824.1;Name=WP_048875824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220125.1;product=translocation/assembly module TamB;protein_id=WP_048875824.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1505221	1505427	.	-	.	ID=gene1518;Name=CleRt_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07090
NZ_CP011126.1	GeneMarkS+	CDS	1505221	1505427	.	-	0	ID=cds1471;Parent=gene1518;Dbxref=Genbank:WP_048875602.1;Name=WP_048875602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875602.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1505428	1505808	.	-	.	ID=gene1519;Name=CleRt_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07095;old_locus_tag=CleRT_13900
NZ_CP011126.1	GeneMarkS+	CDS	1505428	1505808	.	-	0	ID=cds1472;Parent=gene1519;Dbxref=Genbank:WP_048875603.1;Name=WP_048875603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875603.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1506013	1506213	.	-	.	ID=gene1520;Name=CleRt_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07100
NZ_CP011126.1	GeneMarkS+	CDS	1506013	1506213	.	-	0	ID=cds1473;Parent=gene1520;Dbxref=Genbank:WP_048875604.1;Name=WP_048875604.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875604.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1506213	1507098	.	-	.	ID=gene1521;Name=CleRt_RS09380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09380;old_locus_tag=CleRT_13910;partial=true;pseudo=true;start_range=.,1506213
NZ_CP011126.1	Protein Homology	CDS	1506213	1507098	.	-	0	ID=cds1474;Parent=gene1521;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771568.1;partial=true;product=MFS transporter;pseudo=true;start_range=.,1506213;transl_table=11
NZ_CP011126.1	RefSeq	gene	1507242	1508615	.	+	.	ID=gene1522;Name=CleRt_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07110;old_locus_tag=CleRT_13920
NZ_CP011126.1	Protein Homology	CDS	1507242	1508615	.	+	0	ID=cds1475;Parent=gene1522;Dbxref=Genbank:WP_048875605.1;Name=WP_048875605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771566.1;product=L-serine ammonia-lyase;protein_id=WP_048875605.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1509175	1509289	.	-	.	ID=gene1523;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=CleRt_RS07115;old_locus_tag=CleRT_r10
NZ_CP011126.1	cmsearch	rRNA	1509175	1509289	.	-	.	ID=rna47;Parent=gene1523;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;product=5S ribosomal RNA
NZ_CP011126.1	cmsearch	exon	1509175	1509289	.	-	.	ID=id49;Parent=rna47;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;product=5S ribosomal RNA
NZ_CP011126.1	RefSeq	gene	1509319	1512963	.	-	.	ID=gene1524;Name=CleRt_RS07120;gbkey=Gene;gene_biotype=rRNA;locus_tag=CleRt_RS07120;old_locus_tag=CleRT_r20
NZ_CP011126.1	RefSeq	rRNA	1509319	1512963	.	-	.	ID=rna48;Parent=gene1524;gbkey=rRNA;product=23S ribosomal RNA
NZ_CP011126.1	RefSeq	exon	1509319	1512963	.	-	.	ID=id50;Parent=rna48;gbkey=rRNA;product=23S ribosomal RNA
NZ_CP011126.1	RefSeq	gene	1513206	1513278	.	-	.	ID=gene1525;Name=CleRt_RS07125;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS07125;old_locus_tag=CleRT_t045
NZ_CP011126.1	tRNAscan-SE	tRNA	1513206	1513278	.	-	.	ID=rna49;Parent=gene1525;anticodon=(pos:complement(1513243..1513245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ala
NZ_CP011126.1	tRNAscan-SE	exon	1513206	1513278	.	-	.	ID=id51;Parent=rna49;anticodon=(pos:complement(1513243..1513245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ala
NZ_CP011126.1	RefSeq	gene	1513284	1513360	.	-	.	ID=gene1526;Name=CleRt_RS07130;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS07130;old_locus_tag=CleRT_t046
NZ_CP011126.1	tRNAscan-SE	tRNA	1513284	1513360	.	-	.	ID=rna50;Parent=gene1526;anticodon=(pos:complement(1513324..1513326));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ile
NZ_CP011126.1	tRNAscan-SE	exon	1513284	1513360	.	-	.	ID=id52;Parent=rna50;anticodon=(pos:complement(1513324..1513326));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Ile
NZ_CP011126.1	RefSeq	gene	1513506	1515057	.	-	.	ID=gene1527;Name=CleRt_RS07135;gbkey=Gene;gene_biotype=rRNA;locus_tag=CleRt_RS07135;old_locus_tag=CleRT_r30
NZ_CP011126.1	RefSeq	rRNA	1513506	1515057	.	-	.	ID=rna51;Parent=gene1527;gbkey=rRNA;product=16S ribosomal RNA
NZ_CP011126.1	RefSeq	exon	1513506	1515057	.	-	.	ID=id53;Parent=rna51;gbkey=rRNA;product=16S ribosomal RNA
NZ_CP011126.1	RefSeq	gene	1517278	1517502	.	-	.	ID=gene1528;Name=CleRt_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07140
NZ_CP011126.1	GeneMarkS+	CDS	1517278	1517502	.	-	0	ID=cds1476;Parent=gene1528;Dbxref=Genbank:WP_048875606.1;Name=WP_048875606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875606.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1518211	1518465	.	+	.	ID=gene1529;Name=CleRt_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07145
NZ_CP011126.1	GeneMarkS+	CDS	1518211	1518465	.	+	0	ID=cds1477;Parent=gene1529;Dbxref=Genbank:WP_048875607.1;Name=WP_048875607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875607.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1519014	1519286	.	-	.	ID=gene1530;Name=CleRt_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07150
NZ_CP011126.1	GeneMarkS+	CDS	1519014	1519286	.	-	0	ID=cds1478;Parent=gene1530;Dbxref=Genbank:WP_048875608.1;Name=WP_048875608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875608.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1520150	1520560	.	+	.	ID=gene1531;Name=CleRt_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07155;old_locus_tag=CleRT_13940
NZ_CP011126.1	GeneMarkS+	CDS	1520150	1520560	.	+	0	ID=cds1479;Parent=gene1531;Dbxref=Genbank:WP_048875609.1;Name=WP_048875609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875609.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1520806	1522005	.	-	.	ID=gene1532;Name=CleRt_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07160;old_locus_tag=CleRT_13950
NZ_CP011126.1	Protein Homology	CDS	1520806	1522005	.	-	0	ID=cds1480;Parent=gene1532;Dbxref=Genbank:WP_048875610.1;Name=WP_048875610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772944.1;product=tyrosine--tRNA ligase;protein_id=WP_048875610.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1522017	1523371	.	+	.	ID=gene1533;Name=CleRt_RS07165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07165;old_locus_tag=CleRT_13960;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1522017	1523371	.	+	0	ID=cds1481;Parent=gene1533;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997318.1;product=peptidase M23;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1523386	1524467	.	+	.	ID=gene1534;Name=CleRt_RS07170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07170;old_locus_tag=CleRT_13970;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1523386	1524467	.	+	0	ID=cds1482;Parent=gene1534;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770633.1;product=anhydro-N-acetylmuramic acid kinase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1524510	1524881	.	-	.	ID=gene1535;Name=CleRt_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07175
NZ_CP011126.1	GeneMarkS+	CDS	1524510	1524881	.	-	0	ID=cds1483;Parent=gene1535;Dbxref=Genbank:WP_048875611.1;Name=WP_048875611.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=SET domain-containing protein;protein_id=WP_048875611.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1525282	1525479	.	-	.	ID=gene1536;Name=CleRt_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09385
NZ_CP011126.1	Protein Homology	CDS	1525282	1525479	.	-	0	ID=cds1484;Parent=gene1536;Dbxref=Genbank:WP_082160470.1;Name=WP_082160470.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07313.10;product=DUF1460 domain-containing protein;protein_id=WP_082160470.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1525452	1525688	.	-	.	ID=gene1537;Name=CleRt_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07180
NZ_CP011126.1	GeneMarkS+	CDS	1525452	1525688	.	-	0	ID=cds1485;Parent=gene1537;Dbxref=Genbank:WP_048875612.1;Name=WP_048875612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875612.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1525924	1526157	.	-	.	ID=gene1538;Name=CleRt_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07185
NZ_CP011126.1	Protein Homology	CDS	1525924	1526157	.	-	0	ID=cds1486;Parent=gene1538;Dbxref=Genbank:WP_082160471.1;Name=WP_082160471.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF07313.10;product=DUF1460 domain-containing protein;protein_id=WP_082160471.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1526270	1526991	.	+	.	ID=gene1539;Name=CleRt_RS07190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07190;old_locus_tag=CleRT_14000;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1526270	1526991	.	+	0	ID=cds1487;Parent=gene1539;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772946.1;product=glycine/betaine ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1527042	1527662	.	+	.	ID=gene1540;Name=CleRt_RS09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09390;old_locus_tag=CleRT_14010;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1527042	1527662	.	+	0	ID=cds1488;Parent=gene1540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003389558.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1527940	1528618	.	-	.	ID=gene1541;Name=CleRt_RS07200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07200;old_locus_tag=CleRT_14020;partial=true;pseudo=true;start_range=.,1527940
NZ_CP011126.1	Protein Homology	CDS	1527940	1528618	.	-	0	ID=cds1489;Parent=gene1541;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772950.1;partial=true;product=serine/threonine protein kinase;pseudo=true;start_range=.,1527940;transl_table=11
NZ_CP011126.1	RefSeq	gene	1529253	1529489	.	+	.	ID=gene1542;Name=CleRt_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07205
NZ_CP011126.1	GeneMarkS+	CDS	1529253	1529489	.	+	0	ID=cds1490;Parent=gene1542;Dbxref=Genbank:WP_048875614.1;Name=WP_048875614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875614.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1529540	1529791	.	+	.	ID=gene1543;Name=CleRt_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07210
NZ_CP011126.1	GeneMarkS+	CDS	1529540	1529791	.	+	0	ID=cds1491;Parent=gene1543;Dbxref=Genbank:WP_048875615.1;Name=WP_048875615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875615.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1530089	1530313	.	+	.	ID=gene1544;Name=CleRt_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07215
NZ_CP011126.1	GeneMarkS+	CDS	1530089	1530313	.	+	0	ID=cds1492;Parent=gene1544;Dbxref=Genbank:WP_048875616.1;Name=WP_048875616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875616.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1531113	1531322	.	+	.	ID=gene1545;Name=CleRt_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07220
NZ_CP011126.1	Protein Homology	CDS	1531113	1531322	.	+	0	ID=cds1493;Parent=gene1545;Dbxref=Genbank:WP_048875617.1;Name=WP_048875617.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF13443.4;product=XRE family transcriptional regulator;protein_id=WP_048875617.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1533755	1534078	.	+	.	ID=gene1546;Name=CleRt_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09395
NZ_CP011126.1	Protein Homology	CDS	1533755	1534078	.	+	0	ID=cds1494;Parent=gene1546;Dbxref=Genbank:WP_082160472.1;Name=WP_082160472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014628936.1;product=hypothetical protein;protein_id=WP_082160472.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1539013	1540215	.	+	.	ID=gene1547;Name=CleRt_RS07230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07230;old_locus_tag=CleRT_14100;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1539013	1540215	.	+	0	ID=cds1495;Parent=gene1547;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015081724.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1540394	1540469	.	-	.	ID=gene1548;Name=CleRt_RS07235;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS07235;old_locus_tag=CleRT_t047
NZ_CP011126.1	tRNAscan-SE	tRNA	1540394	1540469	.	-	.	ID=rna52;Parent=gene1548;anticodon=(pos:complement(1540434..1540436));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Thr
NZ_CP011126.1	tRNAscan-SE	exon	1540394	1540469	.	-	.	ID=id54;Parent=rna52;anticodon=(pos:complement(1540434..1540436));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Thr
NZ_CP011126.1	RefSeq	pseudogene	1540750	1541187	.	+	.	ID=gene1549;Name=CleRt_RS09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09400;old_locus_tag=CleRT_14110;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1540750	1541187	.	+	0	ID=cds1496;Parent=gene1549;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769527.1;product=pilus assembly protein PilA;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1541177	1542733	.	+	.	ID=gene1550;Name=CleRt_RS07240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07240;old_locus_tag=CleRT_14120;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1541177	1542733	.	+	0	ID=cds1497;Parent=gene1550;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769525.1;product=type 4 pili biogenesis protein (nuleotide-binding protein);pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1543400	1543618	.	+	.	ID=gene1551;Name=CleRt_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07245
NZ_CP011126.1	GeneMarkS+	CDS	1543400	1543618	.	+	0	ID=cds1498;Parent=gene1551;Dbxref=Genbank:WP_048875618.1;Name=WP_048875618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875618.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1543605	1543802	.	+	.	ID=gene1552;Name=CleRt_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07250
NZ_CP011126.1	GeneMarkS+	CDS	1543605	1543802	.	+	0	ID=cds1499;Parent=gene1552;Dbxref=Genbank:WP_048875619.1;Name=WP_048875619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875619.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1543819	1544674	.	+	.	ID=gene1553;Name=CleRt_RS09405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09405;old_locus_tag=CleRT_14140;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1543819	1544674	.	+	0	ID=cds1500;Parent=gene1553;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997345.1;product=prepilin peptidase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1544684	1545280	.	+	.	ID=gene1554;Name=CleRt_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07255;old_locus_tag=CleRT_14150
NZ_CP011126.1	Protein Homology	CDS	1544684	1545280	.	+	0	ID=cds1501;Parent=gene1554;Dbxref=Genbank:WP_048875620.1;Name=WP_048875620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772796.1;product=dephospho-CoA kinase;protein_id=WP_048875620.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1545466	1546245	.	+	.	ID=gene1555;Name=CleRt_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07260;old_locus_tag=CleRT_14160
NZ_CP011126.1	Protein Homology	CDS	1545466	1546245	.	+	0	ID=cds1502;Parent=gene1555;Dbxref=Genbank:WP_048875621.1;Name=WP_048875621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772795.1;product=cell division protein ZapD;protein_id=WP_048875621.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1546225	1546629	.	-	.	ID=gene1556;Name=CleRt_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07265;old_locus_tag=CleRT_14170
NZ_CP011126.1	Protein Homology	CDS	1546225	1546629	.	-	0	ID=cds1503;Parent=gene1556;Dbxref=Genbank:WP_048875622.1;Name=WP_048875622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769513.1;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_048875622.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1546638	1549379	.	-	.	ID=gene1557;Name=CleRt_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07270;old_locus_tag=CleRT_14180
NZ_CP011126.1	Protein Homology	CDS	1546638	1549379	.	-	0	ID=cds1504;Parent=gene1557;Dbxref=Genbank:WP_048875826.1;Name=WP_048875826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772793.1;product=preprotein translocase subunit SecA;protein_id=WP_048875826.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1549428	1549736	.	+	.	ID=gene1558;Name=CleRt_RS07275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07275;old_locus_tag=CleRT_14190;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1549428	1549736	.	+	0	ID=cds1505;Parent=gene1558;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769510.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1550248	1550442	.	-	.	ID=gene1559;Name=CleRt_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07280
NZ_CP011126.1	GeneMarkS+	CDS	1550248	1550442	.	-	0	ID=cds1506;Parent=gene1559;Dbxref=Genbank:WP_048875624.1;Name=WP_048875624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875624.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1551860	1552771	.	-	.	ID=gene1560;Name=CleRt_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07285;old_locus_tag=CleRT_14200
NZ_CP011126.1	Protein Homology	CDS	1551860	1552771	.	-	0	ID=cds1507;Parent=gene1560;Dbxref=Genbank:WP_048875827.1;Name=WP_048875827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769498.1;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_048875827.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1552880	1554040	.	-	.	ID=gene1561;Name=CleRt_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07290;old_locus_tag=CleRT_14210
NZ_CP011126.1	Protein Homology	CDS	1552880	1554040	.	-	0	ID=cds1508;Parent=gene1561;Dbxref=Genbank:WP_048875625.1;Name=WP_048875625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769496.1;product=cell division protein FtsZ;protein_id=WP_048875625.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1554051	1555283	.	-	.	ID=gene1562;Name=CleRt_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07295;old_locus_tag=CleRT_14220
NZ_CP011126.1	Protein Homology	CDS	1554051	1555283	.	-	0	ID=cds1509;Parent=gene1562;Dbxref=Genbank:WP_048875626.1;Name=WP_048875626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769493.1;product=cell division protein FtsA;protein_id=WP_048875626.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1555686	1555952	.	+	.	ID=gene1563;Name=CleRt_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07300;old_locus_tag=CleRT_14230
NZ_CP011126.1	GeneMarkS+	CDS	1555686	1555952	.	+	0	ID=cds1510;Parent=gene1563;Dbxref=Genbank:WP_048875627.1;Name=WP_048875627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875627.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1556101	1556376	.	+	.	ID=gene1564;Name=CleRt_RS09410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09410;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1556101	1556376	.	+	0	ID=cds1511;Parent=gene1564;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013441317.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1557910	1558653	.	-	.	ID=gene1565;Name=CleRt_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07305;old_locus_tag=CleRT_14260
NZ_CP011126.1	Protein Homology	CDS	1557910	1558653	.	-	0	ID=cds1512;Parent=gene1565;Dbxref=Genbank:WP_048875828.1;Name=WP_048875828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769491.1;product=cell division protein FtsQ;protein_id=WP_048875828.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1558634	1559545	.	-	.	ID=gene1566;Name=CleRt_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07310;old_locus_tag=CleRT_14270
NZ_CP011126.1	Protein Homology	CDS	1558634	1559545	.	-	0	ID=cds1513;Parent=gene1566;Dbxref=Genbank:WP_048875628.1;Name=WP_048875628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018954236.1;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=WP_048875628.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1559560	1560972	.	-	.	ID=gene1567;Name=CleRt_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07315;old_locus_tag=CleRT_14280
NZ_CP011126.1	Protein Homology	CDS	1559560	1560972	.	-	0	ID=cds1514;Parent=gene1567;Dbxref=Genbank:WP_048875629.1;Name=WP_048875629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957397.1;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_048875629.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1560969	1562036	.	-	.	ID=gene1568;Name=CleRt_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07320;old_locus_tag=CleRT_14290
NZ_CP011126.1	Protein Homology	CDS	1560969	1562036	.	-	0	ID=cds1515;Parent=gene1568;Dbxref=Genbank:WP_048875630.1;Name=WP_048875630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769484.1;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_048875630.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1562118	1563272	.	-	.	ID=gene1569;Name=CleRt_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07325;old_locus_tag=CleRT_14300
NZ_CP011126.1	Protein Homology	CDS	1562118	1563272	.	-	0	ID=cds1516;Parent=gene1569;Dbxref=Genbank:WP_048875631.1;Name=WP_048875631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957396.1;product=putative lipid II flippase FtsW;protein_id=WP_048875631.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1563272	1564600	.	-	.	ID=gene1570;Name=CleRt_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07330;old_locus_tag=CleRT_14310
NZ_CP011126.1	Protein Homology	CDS	1563272	1564600	.	-	0	ID=cds1517;Parent=gene1570;Dbxref=Genbank:WP_048875632.1;Name=WP_048875632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769470.1;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_048875632.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1564602	1565687	.	-	.	ID=gene1571;Name=CleRt_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07335;old_locus_tag=CleRT_14320
NZ_CP011126.1	Protein Homology	CDS	1564602	1565687	.	-	0	ID=cds1518;Parent=gene1571;Dbxref=Genbank:WP_048875633.1;Name=WP_048875633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008045924.1;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_048875633.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1565690	1567030	.	-	.	ID=gene1572;Name=CleRt_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07340;old_locus_tag=CleRT_14330
NZ_CP011126.1	Protein Homology	CDS	1565690	1567030	.	-	0	ID=cds1519;Parent=gene1572;Dbxref=Genbank:WP_048875634.1;Name=WP_048875634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769456.1;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_048875634.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1567027	1568502	.	-	.	ID=gene1573;Name=CleRt_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07345;old_locus_tag=CleRT_14340
NZ_CP011126.1	Protein Homology	CDS	1567027	1568502	.	-	0	ID=cds1520;Parent=gene1573;Dbxref=Genbank:WP_048875635.1;Name=WP_048875635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769454.1;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_048875635.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1568709	1570370	.	-	.	ID=gene1574;Name=CleRt_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07350;old_locus_tag=CleRT_14350
NZ_CP011126.1	Protein Homology	CDS	1568709	1570370	.	-	0	ID=cds1521;Parent=gene1574;Dbxref=Genbank:WP_048875636.1;Name=WP_048875636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769448.1;product=penicillin-binding protein 2;protein_id=WP_048875636.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1570371	1570727	.	-	.	ID=gene1575;Name=CleRt_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07355;old_locus_tag=CleRT_14360
NZ_CP011126.1	Protein Homology	CDS	1570371	1570727	.	-	0	ID=cds1522;Parent=gene1575;Dbxref=Genbank:WP_048875637.1;Name=WP_048875637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769447.1;product=cell division protein FtsL;protein_id=WP_048875637.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1570724	1571644	.	-	.	ID=gene1576;Name=CleRt_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07360;old_locus_tag=CleRT_14370
NZ_CP011126.1	Protein Homology	CDS	1570724	1571644	.	-	0	ID=cds1523;Parent=gene1576;Dbxref=Genbank:WP_048875638.1;Name=WP_048875638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769446.1;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_048875638.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1571646	1571993	.	-	.	ID=gene1577;Name=CleRt_RS07365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07365;old_locus_tag=CleRT_14380;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1571646	1571993	.	-	0	ID=cds1524;Parent=gene1577;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957389.1;product=cell division/cell wall cluster transcriptional repressor MraZ;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1572294	1572745	.	-	.	ID=gene1578;Name=CleRt_RS07370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07370;old_locus_tag=CleRT_14390;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1572294	1572745	.	-	0	ID=cds1525;Parent=gene1578;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772268.1;product=YajQ family cyclic di-GMP-binding protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1573131	1574156	.	-	.	ID=gene1579;Name=CleRt_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07375;old_locus_tag=CleRT_14400
NZ_CP011126.1	Protein Homology	CDS	1573131	1574156	.	-	0	ID=cds1526;Parent=gene1579;Dbxref=Genbank:WP_048875639.1;Name=WP_048875639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769439.1;product=L-threonine 3-dehydrogenase;protein_id=WP_048875639.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1574162	1575352	.	-	.	ID=gene1580;Name=CleRt_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07380;old_locus_tag=CleRT_14410
NZ_CP011126.1	Protein Homology	CDS	1574162	1575352	.	-	0	ID=cds1527;Parent=gene1580;Dbxref=Genbank:WP_048875640.1;Name=WP_048875640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772253.1;product=glycine C-acetyltransferase;protein_id=WP_048875640.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1576146	1576463	.	-	.	ID=gene1581;Name=CleRt_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07385;old_locus_tag=CleRT_14430
NZ_CP011126.1	GeneMarkS+	CDS	1576146	1576463	.	-	0	ID=cds1528;Parent=gene1581;Dbxref=Genbank:WP_048875641.1;Name=WP_048875641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875641.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1576529	1576978	.	-	.	ID=gene1582;Name=CleRt_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07390;old_locus_tag=CleRT_14440
NZ_CP011126.1	GeneMarkS+	CDS	1576529	1576978	.	-	0	ID=cds1529;Parent=gene1582;Dbxref=Genbank:WP_048875642.1;Name=WP_048875642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875642.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1577572	1577796	.	-	.	ID=gene1583;Name=CleRt_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07395
NZ_CP011126.1	GeneMarkS+	CDS	1577572	1577796	.	-	0	ID=cds1530;Parent=gene1583;Dbxref=Genbank:WP_048875643.1;Name=WP_048875643.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875643.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1578930	1579118	.	-	.	ID=gene1584;Name=CleRt_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07400
NZ_CP011126.1	GeneMarkS+	CDS	1578930	1579118	.	-	0	ID=cds1531;Parent=gene1584;Dbxref=Genbank:WP_048875644.1;Name=WP_048875644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875644.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1579255	1579600	.	-	.	ID=gene1585;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=CleRt_RS08530
NZ_CP011126.1	cmsearch	RNase_P_RNA	1579255	1579600	.	-	.	ID=rna53;Parent=gene1585;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;product=RNase P RNA component class A
NZ_CP011126.1	cmsearch	exon	1579255	1579600	.	-	.	ID=id55;Parent=rna53;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;product=RNase P RNA component class A
NZ_CP011126.1	RefSeq	pseudogene	1579608	1580331	.	-	.	ID=gene1586;Name=CleRt_RS09415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09415;old_locus_tag=CleRT_14450;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1579608	1580331	.	-	0	ID=cds1532;Parent=gene1586;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018575906.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1580483	1581140	.	-	.	ID=gene1587;Name=CleRt_RS07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07410;old_locus_tag=CleRT_14460;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1580483	1581140	.	-	0	ID=cds1533;Parent=gene1587;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769429.1;product=methionine ABC transporter permease;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1581109	1581848	.	-	.	ID=gene1588;Name=CleRt_RS09420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09420;old_locus_tag=CleRT_14470;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1581109	1581848	.	-	0	ID=cds1534;Parent=gene1588;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220094.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1582116	1583558	.	+	.	ID=gene1589;Name=CleRt_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07420;old_locus_tag=CleRT_14480
NZ_CP011126.1	Protein Homology	CDS	1582116	1583558	.	+	0	ID=cds1535;Parent=gene1589;Dbxref=Genbank:WP_048875646.1;Name=WP_048875646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769423.1;product=peptidase M20;protein_id=WP_048875646.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1584481	1586063	.	+	.	ID=gene1590;Name=CleRt_RS09425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09425;old_locus_tag=CleRT_14500;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1584481	1586063	.	+	0	ID=cds1536;Parent=gene1590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772257.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1586288	1586767	.	-	.	ID=gene1591;Name=CleRt_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07430;old_locus_tag=CleRT_14520
NZ_CP011126.1	Protein Homology	CDS	1586288	1586767	.	-	0	ID=cds1537;Parent=gene1591;Dbxref=Genbank:WP_048875647.1;Name=WP_048875647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220091.1;product=phosphohistidine phosphatase SixA;protein_id=WP_048875647.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1587235	1587310	.	+	.	ID=gene1592;Name=CleRt_RS07435;gbkey=Gene;gene_biotype=tRNA;locus_tag=CleRt_RS07435;old_locus_tag=CleRT_t048
NZ_CP011126.1	tRNAscan-SE	tRNA	1587235	1587310	.	+	.	ID=rna54;Parent=gene1592;anticodon=(pos:1587269..1587271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Glu
NZ_CP011126.1	tRNAscan-SE	exon	1587235	1587310	.	+	.	ID=id56;Parent=rna54;anticodon=(pos:1587269..1587271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;product=tRNA-Glu
NZ_CP011126.1	RefSeq	gene	1589266	1589451	.	-	.	ID=gene1593;Name=CleRt_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07440
NZ_CP011126.1	GeneMarkS+	CDS	1589266	1589451	.	-	0	ID=cds1538;Parent=gene1593;Dbxref=Genbank:WP_048875648.1;Name=WP_048875648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875648.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1590138	1590977	.	-	.	ID=gene1594;Name=CleRt_RS07445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07445;old_locus_tag=CleRT_14570;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1590138	1590977	.	-	0	ID=cds1539;Parent=gene1594;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957378.1;product=nicotinate-nucleotide diphosphorylase (carboxylating);pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1590974	1591738	.	-	.	ID=gene1595;Name=CleRt_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07450;old_locus_tag=CleRT_14590
NZ_CP011126.1	Protein Homology	CDS	1590974	1591738	.	-	0	ID=cds1540;Parent=gene1595;Dbxref=Genbank:WP_048875649.1;Name=WP_048875649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957377.1;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_048875649.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1591829	1592107	.	+	.	ID=gene1596;Name=CleRt_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07455;old_locus_tag=CleRT_14600
NZ_CP011126.1	Protein Homology	CDS	1591829	1592107	.	+	0	ID=cds1541;Parent=gene1596;Dbxref=Genbank:WP_048875650.1;Name=WP_048875650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769408.1;product=DUF3579 domain-containing protein;protein_id=WP_048875650.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1592108	1593280	.	+	.	ID=gene1597;Name=CleRt_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07460;old_locus_tag=CleRT_14610
NZ_CP011126.1	Protein Homology	CDS	1592108	1593280	.	+	0	ID=cds1542;Parent=gene1597;Dbxref=Genbank:WP_048875651.1;Name=WP_048875651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769406.1;product=cardiolipin synthase B;protein_id=WP_048875651.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1593387	1594158	.	-	.	ID=gene1598;Name=CleRt_RS09430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09430;old_locus_tag=CleRT_14620;partial=true;pseudo=true;start_range=.,1593387
NZ_CP011126.1	Protein Homology	CDS	1593387	1594158	.	-	0	ID=cds1543;Parent=gene1598;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570914.1;partial=true;product=sodium:calcium exchanger;pseudo=true;start_range=.,1593387;transl_table=11
NZ_CP011126.1	RefSeq	gene	1594155	1596734	.	-	.	ID=gene1599;Name=CleRt_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07470;old_locus_tag=CleRT_14630
NZ_CP011126.1	Protein Homology	CDS	1594155	1596734	.	-	0	ID=cds1544;Parent=gene1599;Dbxref=Genbank:WP_048875652.1;Name=WP_048875652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010957374.1;product=ATP-dependent chaperone ClpB;protein_id=WP_048875652.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1596983	1597270	.	+	.	ID=gene1600;Name=CleRt_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07475
NZ_CP011126.1	GeneMarkS+	CDS	1596983	1597270	.	+	0	ID=cds1545;Parent=gene1600;Dbxref=Genbank:WP_048875653.1;Name=WP_048875653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875653.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1597476	1598092	.	-	.	ID=gene1601;Name=CleRt_RS07480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07480;old_locus_tag=CleRT_14650;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1597476	1598092	.	-	0	ID=cds1546;Parent=gene1601;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769397.1;product=7-carboxy-7-deazaguanine synthase QueE;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1598089	1599006	.	-	.	ID=gene1602;Name=CleRt_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07485;old_locus_tag=CleRT_14660
NZ_CP011126.1	Protein Homology	CDS	1598089	1599006	.	-	0	ID=cds1547;Parent=gene1602;Dbxref=Genbank:WP_048875654.1;Name=WP_048875654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769394.1;product=tol-pal system protein YbgF;protein_id=WP_048875654.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1599009	1599599	.	-	.	ID=gene1603;Name=CleRt_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07490;old_locus_tag=CleRT_14670
NZ_CP011126.1	Protein Homology	CDS	1599009	1599599	.	-	0	ID=cds1548;Parent=gene1603;Dbxref=Genbank:WP_048875655.1;Name=WP_048875655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570479.1;product=peptidoglycan-binding protein;protein_id=WP_048875655.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1599629	1600933	.	-	.	ID=gene1604;Name=CleRt_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07495;old_locus_tag=CleRT_14680
NZ_CP011126.1	Protein Homology	CDS	1599629	1600933	.	-	0	ID=cds1549;Parent=gene1604;Dbxref=Genbank:WP_082160473.1;Name=WP_082160473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769388.1;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_082160473.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1601002	1601811	.	-	.	ID=gene1605;Name=CleRt_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07500;old_locus_tag=CleRT_14690
NZ_CP011126.1	Protein Homology	CDS	1601002	1601811	.	-	0	ID=cds1550;Parent=gene1605;Dbxref=Genbank:WP_048875656.1;Name=WP_048875656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769385.1;product=cell envelope integrity protein TolA;protein_id=WP_048875656.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1601841	1603859	.	-	.	ID=gene1606;Name=CleRt_RS07505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07505;old_locus_tag=CleRT_14700;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1601841	1603859	.	-	0	ID=cds1551;Parent=gene1606;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772273.1;product=phosphoglycerol transferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1604262	1605550	.	-	.	ID=gene1607;Name=CleRt_RS09435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09435;old_locus_tag=CleRT_14710;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1604262	1605550	.	-	0	ID=cds1552;Parent=gene1607;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220083.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1605798	1607510	.	-	.	ID=gene1608;Name=CleRt_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07515;old_locus_tag=CleRT_14720
NZ_CP011126.1	Protein Homology	CDS	1605798	1607510	.	-	0	ID=cds1553;Parent=gene1608;Dbxref=Genbank:WP_048875658.1;Name=WP_048875658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004129145.1;product=proline--tRNA ligase;protein_id=WP_048875658.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1608452	1609672	.	-	.	ID=gene1609;Name=CleRt_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07520;old_locus_tag=CleRT_14730
NZ_CP011126.1	Protein Homology	CDS	1608452	1609672	.	-	0	ID=cds1554;Parent=gene1609;Dbxref=Genbank:WP_048875830.1;Name=WP_048875830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769362.1;product=ubiquinone biosynthesis protein UbiH;protein_id=WP_048875830.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1609669	1610904	.	-	.	ID=gene1610;Name=CleRt_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07525;old_locus_tag=CleRT_14740
NZ_CP011126.1	Protein Homology	CDS	1609669	1610904	.	-	0	ID=cds1555;Parent=gene1610;Dbxref=Genbank:WP_048875831.1;Name=WP_048875831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997380.1;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_048875831.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1610997	1612823	.	+	.	ID=gene1611;Name=CleRt_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07530;old_locus_tag=CleRT_14750
NZ_CP011126.1	Protein Homology	CDS	1610997	1612823	.	+	0	ID=cds1556;Parent=gene1611;Dbxref=Genbank:WP_048875832.1;Name=WP_048875832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253070.1;product=aminopeptidase P family protein;protein_id=WP_048875832.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1612930	1613142	.	+	.	ID=gene1612;Name=CleRt_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07535;old_locus_tag=CleRT_14760
NZ_CP011126.1	Protein Homology	CDS	1612930	1613142	.	+	0	ID=cds1557;Parent=gene1612;Dbxref=Genbank:WP_048875659.1;Name=WP_048875659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769306.1;product=TIGR02449 family protein;protein_id=WP_048875659.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1613139	1613459	.	+	.	ID=gene1613;Name=CleRt_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07540;old_locus_tag=CleRT_14770
NZ_CP011126.1	Protein Homology	CDS	1613139	1613459	.	+	0	ID=cds1558;Parent=gene1613;Dbxref=Genbank:WP_048875660.1;Name=WP_048875660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769307.1;product=cell division protein ZapA;protein_id=WP_048875660.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1613664	1614254	.	+	.	ID=gene1614;Name=CleRt_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07545;old_locus_tag=CleRT_14780
NZ_CP011126.1	Protein Homology	CDS	1613664	1614254	.	+	0	ID=cds1559;Parent=gene1614;Dbxref=Genbank:WP_048875661.1;Name=WP_048875661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570929.1;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_048875661.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1614265	1614699	.	-	.	ID=gene1615;Name=CleRt_RS07550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07550;old_locus_tag=CleRT_14790;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1614265	1614699	.	-	0	ID=cds1560;Parent=gene1615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005771996.1;product=EVE domain-containing protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1614700	1615041	.	-	.	ID=gene1616;Name=CleRt_RS07555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07555;old_locus_tag=CleRT_14800;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1614700	1615041	.	-	0	ID=cds1561;Parent=gene1616;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220060.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1615114	1615491	.	-	.	ID=gene1617;Name=CleRt_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07560;old_locus_tag=CleRT_14810
NZ_CP011126.1	Protein Homology	CDS	1615114	1615491	.	-	0	ID=cds1562;Parent=gene1617;Dbxref=Genbank:WP_048875662.1;Name=WP_048875662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002645300.1;product=sulfurtransferase;protein_id=WP_048875662.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1615505	1617421	.	-	.	ID=gene1618;Name=CleRt_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07565;old_locus_tag=CleRT_14820
NZ_CP011126.1	Protein Homology	CDS	1615505	1617421	.	-	0	ID=cds1563;Parent=gene1618;Dbxref=Genbank:WP_048875663.1;Name=WP_048875663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769312.1;product=DNA topoisomerase IV subunit B;protein_id=WP_048875663.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1617568	1618881	.	+	.	ID=gene1619;Name=CleRt_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07570;old_locus_tag=CleRT_14830
NZ_CP011126.1	Protein Homology	CDS	1617568	1618881	.	+	0	ID=cds1564;Parent=gene1619;Dbxref=Genbank:WP_048875664.1;Name=WP_048875664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769313.1;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_048875664.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1619034	1620794	.	-	.	ID=gene1620;Name=CleRt_RS07575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07575;old_locus_tag=CleRT_14840;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1619034	1620794	.	-	0	ID=cds1565;Parent=gene1620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769324.1;product=channel protein TolC;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1620918	1621781	.	-	.	ID=gene1621;Name=CleRt_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07580;old_locus_tag=CleRT_14850
NZ_CP011126.1	Protein Homology	CDS	1620918	1621781	.	-	0	ID=cds1566;Parent=gene1621;Dbxref=Genbank:WP_048875833.1;Name=WP_048875833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769326.1;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_048875833.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1621774	1621941	.	-	.	ID=gene1622;Name=CleRt_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09440
NZ_CP011126.1	Protein Homology	CDS	1621774	1621941	.	-	0	ID=cds1567;Parent=gene1622;Dbxref=Genbank:WP_082160512.1;Name=WP_082160512.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04345.11;product=chorismate lyase;protein_id=WP_082160512.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1622041	1622259	.	-	.	ID=gene1623;Name=CleRt_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07585
NZ_CP011126.1	GeneMarkS+	CDS	1622041	1622259	.	-	0	ID=cds1568;Parent=gene1623;Dbxref=Genbank:WP_048875665.1;Name=WP_048875665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875665.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1622959	1623162	.	-	.	ID=gene1624;Name=CleRt_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08490
NZ_CP011126.1	GeneMarkS+	CDS	1622959	1623162	.	-	0	ID=cds1569;Parent=gene1624;Dbxref=Genbank:WP_053097944.1;Name=WP_053097944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097944.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1623385	1623681	.	+	.	ID=gene1625;Name=CleRt_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07595;old_locus_tag=CleRT_14880
NZ_CP011126.1	GeneMarkS+	CDS	1623385	1623681	.	+	0	ID=cds1570;Parent=gene1625;Dbxref=Genbank:WP_053097947.1;Name=WP_053097947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097947.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1623778	1624333	.	+	.	ID=gene1626;Name=CleRt_RS07600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07600;old_locus_tag=CleRT_14890;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1623778	1624333	.	+	0	ID=cds1571;Parent=gene1626;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570493.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1624732	1624914	.	-	.	ID=gene1627;Name=CleRt_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07605
NZ_CP011126.1	GeneMarkS+	CDS	1624732	1624914	.	-	0	ID=cds1572;Parent=gene1627;Dbxref=Genbank:WP_048875666.1;Name=WP_048875666.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875666.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1625251	1625430	.	+	.	ID=gene1628;Name=CleRt_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09445
NZ_CP011126.1	Protein Homology	CDS	1625251	1625430	.	+	0	ID=cds1573;Parent=gene1628;Dbxref=Genbank:WP_082160474.1;Name=WP_082160474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00437.18;product=hypothetical protein;protein_id=WP_082160474.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1625408	1625587	.	-	.	ID=gene1629;Name=CleRt_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07610
NZ_CP011126.1	GeneMarkS+	CDS	1625408	1625587	.	-	0	ID=cds1574;Parent=gene1629;Dbxref=Genbank:WP_048875667.1;Name=WP_048875667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875667.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1626256	1626450	.	+	.	ID=gene1630;Name=CleRt_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07615
NZ_CP011126.1	GeneMarkS+	CDS	1626256	1626450	.	+	0	ID=cds1575;Parent=gene1630;Dbxref=Genbank:WP_048875668.1;Name=WP_048875668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875668.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1627544	1627633	.	+	.	ID=gene1631;Name=CleRt_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09450
NZ_CP011126.1	Protein Homology	CDS	1627544	1627633	.	+	0	ID=cds1576;Parent=gene1631;Dbxref=Genbank:WP_082160513.1;Name=WP_082160513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_082160513.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1628485	1628733	.	+	.	ID=gene1632;Name=CleRt_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07620
NZ_CP011126.1	GeneMarkS+	CDS	1628485	1628733	.	+	0	ID=cds1577;Parent=gene1632;Dbxref=Genbank:WP_048875669.1;Name=WP_048875669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875669.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1630174	1630455	.	+	.	ID=gene1633;Name=CleRt_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07625
NZ_CP011126.1	GeneMarkS+	CDS	1630174	1630455	.	+	0	ID=cds1578;Parent=gene1633;Dbxref=Genbank:WP_048875670.1;Name=WP_048875670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875670.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1631942	1632295	.	+	.	ID=gene1634;Name=CleRt_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07630
NZ_CP011126.1	GeneMarkS+	CDS	1631942	1632295	.	+	0	ID=cds1579;Parent=gene1634;Dbxref=Genbank:WP_048875671.1;Name=WP_048875671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875671.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1633963	1634163	.	+	.	ID=gene1635;Name=CleRt_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07635
NZ_CP011126.1	GeneMarkS+	CDS	1633963	1634163	.	+	0	ID=cds1580;Parent=gene1635;Dbxref=Genbank:WP_048875672.1;Name=WP_048875672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875672.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1634573	1634833	.	+	.	ID=gene1636;Name=CleRt_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08495
NZ_CP011126.1	GeneMarkS+	CDS	1634573	1634833	.	+	0	ID=cds1581;Parent=gene1636;Dbxref=Genbank:WP_053097949.1;Name=WP_053097949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097949.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1635554	1636367	.	+	.	ID=gene1637;Name=CleRt_RS07645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07645;old_locus_tag=CleRT_14970;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1635554	1636367	.	+	0	ID=cds1582;Parent=gene1637;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769338.1;product=multidrug ABC transporter ATP-binding protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1636451	1637436	.	+	.	ID=gene1638;Name=CleRt_RS07650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07650;old_locus_tag=CleRT_14990;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1636451	1637436	.	+	0	ID=cds1583;Parent=gene1638;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012351698.1;product=mannose-1-phosphate guanyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1637690	1638150	.	+	.	ID=gene1639;Name=CleRt_RS09455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09455;old_locus_tag=CleRT_15000;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1637690	1638150	.	+	0	ID=cds1584;Parent=gene1639;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769342.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1638347	1638529	.	-	.	ID=gene1640;Name=CleRt_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09460
NZ_CP011126.1	GeneMarkS+	CDS	1638347	1638529	.	-	0	ID=cds1585;Parent=gene1640;Dbxref=Genbank:WP_082160475.1;Name=WP_082160475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_082160475.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1639141	1639743	.	-	.	ID=gene1641;Name=CleRt_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07665;old_locus_tag=CleRT_15020
NZ_CP011126.1	Protein Homology	CDS	1639141	1639743	.	-	0	ID=cds1586;Parent=gene1641;Dbxref=Genbank:WP_048875673.1;Name=WP_048875673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769347.1;product=non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family;protein_id=WP_048875673.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1640106	1641138	.	-	.	ID=gene1642;Name=CleRt_RS07670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07670;old_locus_tag=CleRT_15030;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1640106	1641138	.	-	0	ID=cds1587;Parent=gene1642;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220074.1;product=ferrochelatase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1641149	1641982	.	-	.	ID=gene1643;Name=CleRt_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07675;old_locus_tag=CleRT_15040
NZ_CP011126.1	Protein Homology	CDS	1641149	1641982	.	-	0	ID=cds1588;Parent=gene1643;Dbxref=Genbank:WP_048875834.1;Name=WP_048875834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958568.1;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_048875834.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1642002	1643087	.	-	.	ID=gene1644;Name=CleRt_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07680;old_locus_tag=CleRT_15050
NZ_CP011126.1	Protein Homology	CDS	1642002	1643087	.	-	0	ID=cds1589;Parent=gene1644;Dbxref=Genbank:WP_048875674.1;Name=WP_048875674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570503.1;product=peptide chain release factor 1;protein_id=WP_048875674.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1643145	1643318	.	-	.	ID=gene1645;Name=CleRt_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09465
NZ_CP011126.1	Protein Homology	CDS	1643145	1643318	.	-	0	ID=cds1590;Parent=gene1645;Dbxref=Genbank:WP_082160476.1;Name=WP_082160476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05201.13;product=hypothetical protein;protein_id=WP_082160476.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1643315	1643509	.	-	.	ID=gene1646;Name=CleRt_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07685
NZ_CP011126.1	Protein Homology	CDS	1643315	1643509	.	-	0	ID=cds1591;Parent=gene1646;Dbxref=Genbank:WP_048875675.1;Name=WP_048875675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF05201.13;product=hypothetical protein;protein_id=WP_048875675.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1643787	1644170	.	-	.	ID=gene1647;Name=CleRt_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07690;old_locus_tag=CleRT_15070
NZ_CP011126.1	Protein Homology	CDS	1643787	1644170	.	-	0	ID=cds1592;Parent=gene1647;Dbxref=Genbank:WP_048875676.1;Name=WP_048875676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769675.1;product=dihydroneopterin aldolase;protein_id=WP_048875676.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1644163	1644612	.	-	.	ID=gene1648;Name=CleRt_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07695;old_locus_tag=CleRT_15080
NZ_CP011126.1	Protein Homology	CDS	1644163	1644612	.	-	0	ID=cds1593;Parent=gene1648;Dbxref=Genbank:WP_048875677.1;Name=WP_048875677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769678.1;product=RNA polymerase-binding protein DksA;protein_id=WP_048875677.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1644744	1645574	.	-	.	ID=gene1649;Name=CleRt_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07700;old_locus_tag=CleRT_15090
NZ_CP011126.1	Protein Homology	CDS	1644744	1645574	.	-	0	ID=cds1594;Parent=gene1649;Dbxref=Genbank:WP_082160477.1;Name=WP_082160477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769680.1;product=diaminopimelate epimerase;protein_id=WP_082160477.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1645774	1646445	.	+	.	ID=gene1650;Name=CleRt_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07705;old_locus_tag=CleRT_15100
NZ_CP011126.1	Protein Homology	CDS	1645774	1646445	.	+	0	ID=cds1595;Parent=gene1650;Dbxref=Genbank:WP_048875678.1;Name=WP_048875678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772443.1;product=carboxylesterase;protein_id=WP_048875678.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1646425	1647041	.	-	.	ID=gene1651;Name=CleRt_RS07710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07710;old_locus_tag=CleRT_15110;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1646425	1647041	.	-	0	ID=cds1596;Parent=gene1651;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958576.1;product=mannose-1-phosphate guanylyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1647076	1647963	.	-	.	ID=gene1652;Name=CleRt_RS07715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07715;old_locus_tag=CleRT_15120;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1647076	1647963	.	-	0	ID=cds1597;Parent=gene1652;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220052.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1648067	1650676	.	+	.	ID=gene1653;Name=CleRt_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07720;old_locus_tag=CleRT_15130
NZ_CP011126.1	Protein Homology	CDS	1648067	1650676	.	+	0	ID=cds1598;Parent=gene1653;Dbxref=Genbank:WP_048875679.1;Name=WP_048875679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769696.1;product=LPS-assembly protein LptD;protein_id=WP_048875679.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1650682	1651650	.	+	.	ID=gene1654;Name=CleRt_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07725;old_locus_tag=CleRT_15140
NZ_CP011126.1	Protein Homology	CDS	1650682	1651650	.	+	0	ID=cds1599;Parent=gene1654;Dbxref=Genbank:WP_048875680.1;Name=WP_048875680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570509.1;product=peptidylprolyl isomerase;protein_id=WP_048875680.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1651650	1652573	.	+	.	ID=gene1655;Name=CleRt_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07730;old_locus_tag=CleRT_15150
NZ_CP011126.1	Protein Homology	CDS	1651650	1652573	.	+	0	ID=cds1600;Parent=gene1655;Dbxref=Genbank:WP_048875681.1;Name=WP_048875681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000093012.1;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_048875681.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1652570	1653358	.	+	.	ID=gene1656;Name=CleRt_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07735;old_locus_tag=CleRT_15160
NZ_CP011126.1	Protein Homology	CDS	1652570	1653358	.	+	0	ID=cds1601;Parent=gene1656;Dbxref=Genbank:WP_048875682.1;Name=WP_048875682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769704.1;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_048875682.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1653396	1653809	.	+	.	ID=gene1657;Name=CleRt_RS09470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09470;old_locus_tag=CleRT_15170;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1653396	1653809	.	+	0	ID=cds1602;Parent=gene1657;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570510.1;product=universal stress protein UspA;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1654663	1655040	.	+	.	ID=gene1658;Name=CleRt_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08505
NZ_CP011126.1	GeneMarkS+	CDS	1654663	1655040	.	+	0	ID=cds1603;Parent=gene1658;Dbxref=Genbank:WP_053097952.1;Name=WP_053097952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097952.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1655059	1655994	.	+	.	ID=gene1659;Name=CleRt_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07745;old_locus_tag=CleRT_15200
NZ_CP011126.1	Protein Homology	CDS	1655059	1655994	.	+	0	ID=cds1604;Parent=gene1659;Dbxref=Genbank:WP_048875683.1;Name=WP_048875683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220048.1;product=S49 family peptidase;protein_id=WP_048875683.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1656007	1656831	.	+	.	ID=gene1660;Name=CleRt_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07750;old_locus_tag=CleRT_15210
NZ_CP011126.1	Protein Homology	CDS	1656007	1656831	.	+	0	ID=cds1605;Parent=gene1660;Dbxref=Genbank:WP_048875684.1;Name=WP_048875684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006034676.1;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_048875684.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1656891	1657083	.	+	.	ID=gene1661;Name=CleRt_RS09475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09475;old_locus_tag=CleRT_15220;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1656891	1657083	.	+	0	ID=cds1606;Parent=gene1661;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769716.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1657083	1657334	.	+	.	ID=gene1662;Name=CleRt_RS09480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09480;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1657083	1657334	.	+	0	ID=cds1607;Parent=gene1662;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769718.1;product=toxin YoeB;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1657345	1657848	.	-	.	ID=gene1663;Name=CleRt_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07755;old_locus_tag=CleRT_15230
NZ_CP011126.1	Protein Homology	CDS	1657345	1657848	.	-	0	ID=cds1608;Parent=gene1663;Dbxref=Genbank:WP_048875685.1;Name=WP_048875685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010506592.1;product=type 3 dihydrofolate reductase;protein_id=WP_048875685.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1657859	1658355	.	-	.	ID=gene1664;Name=CleRt_RS07760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07760;old_locus_tag=CleRT_15240;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1657859	1658355	.	-	0	ID=cds1609;Parent=gene1664;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343912.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1658743	1658993	.	+	.	ID=gene1665;Name=CleRt_RS09485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09485;old_locus_tag=CleRT_15250;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1658743	1658993	.	+	0	ID=cds1610;Parent=gene1665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769730.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1659014	1659562	.	-	.	ID=gene1666;Name=CleRt_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07770;old_locus_tag=CleRT_15260
NZ_CP011126.1	Protein Homology	CDS	1659014	1659562	.	-	0	ID=cds1611;Parent=gene1666;Dbxref=Genbank:WP_048875687.1;Name=WP_048875687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769732.1;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_048875687.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1659595	1660536	.	-	.	ID=gene1667;Name=CleRt_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07775;old_locus_tag=CleRT_15270
NZ_CP011126.1	Protein Homology	CDS	1659595	1660536	.	-	0	ID=cds1612;Parent=gene1667;Dbxref=Genbank:WP_048875688.1;Name=WP_048875688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958586.1;product=methionyl-tRNA formyltransferase;protein_id=WP_048875688.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1660687	1661609	.	+	.	ID=gene1668;Name=CleRt_RS09490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09490;old_locus_tag=CleRT_15280;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1660687	1661609	.	+	0	ID=cds1613;Parent=gene1668;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220045.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1661609	1662085	.	+	.	ID=gene1669;Name=CleRt_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07780;old_locus_tag=CleRT_15290
NZ_CP011126.1	Protein Homology	CDS	1661609	1662085	.	+	0	ID=cds1614;Parent=gene1669;Dbxref=Genbank:WP_048875689.1;Name=WP_048875689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220044.1;product=DUF494 domain-containing protein;protein_id=WP_048875689.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1662089	1664392	.	+	.	ID=gene1670;Name=CleRt_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07785;old_locus_tag=CleRT_15300
NZ_CP011126.1	Protein Homology	CDS	1662089	1664392	.	+	0	ID=cds1615;Parent=gene1670;Dbxref=Genbank:WP_048875690.1;Name=WP_048875690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769743.1;product=DNA topoisomerase I;protein_id=WP_048875690.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1664385	1664883	.	+	.	ID=gene1671;Name=CleRt_RS09495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09495;old_locus_tag=CleRT_15310;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1664385	1664883	.	+	0	ID=cds1616;Parent=gene1671;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769750.1;product=5-(carboxyamino)imidazole ribonucleotide mutase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1664886	1665449	.	+	.	ID=gene1672;Name=CleRt_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07790;old_locus_tag=CleRT_15320
NZ_CP011126.1	Protein Homology	CDS	1664886	1665449	.	+	0	ID=cds1617;Parent=gene1672;Dbxref=Genbank:WP_048875836.1;Name=WP_048875836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220042.1;product=threonylcarbamoyl-AMP synthase;protein_id=WP_048875836.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1665495	1666559	.	-	.	ID=gene1673;Name=CleRt_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07795;old_locus_tag=CleRT_15330
NZ_CP011126.1	Protein Homology	CDS	1665495	1666559	.	-	0	ID=cds1618;Parent=gene1673;Dbxref=Genbank:WP_048875691.1;Name=WP_048875691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997417.1;product=lipopolysaccharide heptosyltransferase family protein;protein_id=WP_048875691.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1666571	1667833	.	-	.	ID=gene1674;Name=CleRt_RS07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07800;old_locus_tag=CleRT_15340;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1666571	1667833	.	-	0	ID=cds1619;Parent=gene1674;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769757.1;product=two-component sensor histidine kinase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1667833	1668571	.	-	.	ID=gene1675;Name=CleRt_RS07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07805;old_locus_tag=CleRT_15350;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1667833	1668571	.	-	0	ID=cds1620;Parent=gene1675;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958593.1;product=DNA-binding response regulator;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1668700	1668969	.	-	.	ID=gene1676;Name=CleRt_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07810
NZ_CP011126.1	GeneMarkS+	CDS	1668700	1668969	.	-	0	ID=cds1621;Parent=gene1676;Dbxref=Genbank:WP_048875692.1;Name=WP_048875692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875692.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1669678	1669935	.	+	.	ID=gene1677;Name=CleRt_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07815
NZ_CP011126.1	GeneMarkS+	CDS	1669678	1669935	.	+	0	ID=cds1622;Parent=gene1677;Dbxref=Genbank:WP_048875693.1;Name=WP_048875693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875693.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1669968	1671722	.	+	.	ID=gene1678;Name=CleRt_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07820;old_locus_tag=CleRT_15370
NZ_CP011126.1	Protein Homology	CDS	1669968	1671722	.	+	0	ID=cds1623;Parent=gene1678;Dbxref=Genbank:WP_048875694.1;Name=WP_048875694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769763.1;product=arginine--tRNA ligase;protein_id=WP_048875694.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1672756	1672956	.	+	.	ID=gene1679;Name=CleRt_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07825
NZ_CP011126.1	GeneMarkS+	CDS	1672756	1672956	.	+	0	ID=cds1624;Parent=gene1679;Dbxref=Genbank:WP_048875695.1;Name=WP_048875695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875695.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1673093	1673284	.	-	.	ID=gene1680;Name=CleRt_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07830
NZ_CP011126.1	GeneMarkS+	CDS	1673093	1673284	.	-	0	ID=cds1625;Parent=gene1680;Dbxref=Genbank:WP_048875696.1;Name=WP_048875696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875696.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1673725	1674270	.	+	.	ID=gene1681;Name=CleRt_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07835;old_locus_tag=CleRT_15400
NZ_CP011126.1	Protein Homology	CDS	1673725	1674270	.	+	0	ID=cds1626;Parent=gene1681;Dbxref=Genbank:WP_048875697.1;Name=WP_048875697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769770.1;product=ATP-dependent protease subunit HslV;protein_id=WP_048875697.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1674346	1675695	.	+	.	ID=gene1682;Name=CleRt_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07840;old_locus_tag=CleRT_15410
NZ_CP011126.1	Protein Homology	CDS	1674346	1675695	.	+	0	ID=cds1627;Parent=gene1682;Dbxref=Genbank:WP_048875837.1;Name=WP_048875837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010488535.1;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_048875837.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1675935	1676135	.	-	.	ID=gene1683;Name=CleRt_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08510
NZ_CP011126.1	GeneMarkS+	CDS	1675935	1676135	.	-	0	ID=cds1628;Parent=gene1683;Dbxref=Genbank:WP_053097954.1;Name=WP_053097954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097954.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1676467	1676670	.	-	.	ID=gene1684;Name=CleRt_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08515
NZ_CP011126.1	GeneMarkS+	CDS	1676467	1676670	.	-	0	ID=cds1629;Parent=gene1684;Dbxref=Genbank:WP_053097957.1;Name=WP_053097957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097957.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1676919	1677209	.	+	.	ID=gene1685;Name=CleRt_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07850
NZ_CP011126.1	GeneMarkS+	CDS	1676919	1677209	.	+	0	ID=cds1630;Parent=gene1685;Dbxref=Genbank:WP_048875698.1;Name=WP_048875698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875698.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1677406	1677612	.	+	.	ID=gene1686;Name=CleRt_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07855
NZ_CP011126.1	GeneMarkS+	CDS	1677406	1677612	.	+	0	ID=cds1631;Parent=gene1686;Dbxref=Genbank:WP_048875699.1;Name=WP_048875699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875699.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1678558	1679307	.	+	.	ID=gene1687;Name=CleRt_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07860;old_locus_tag=CleRT_15440
NZ_CP011126.1	Protein Homology	CDS	1678558	1679307	.	+	0	ID=cds1632;Parent=gene1687;Dbxref=Genbank:WP_048875700.1;Name=WP_048875700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769782.1;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_048875700.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1679307	1679921	.	+	.	ID=gene1688;Name=CleRt_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07865;old_locus_tag=CleRT_15450
NZ_CP011126.1	Protein Homology	CDS	1679307	1679921	.	+	0	ID=cds1633;Parent=gene1688;Dbxref=Genbank:WP_048875701.1;Name=WP_048875701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769785.1;product=hypothetical protein;protein_id=WP_048875701.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1679918	1681540	.	+	.	ID=gene1689;Name=CleRt_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07870;old_locus_tag=CleRT_15460
NZ_CP011126.1	Protein Homology	CDS	1679918	1681540	.	+	0	ID=cds1634;Parent=gene1689;Dbxref=Genbank:WP_048875702.1;Name=WP_048875702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220031.1;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_048875702.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1681872	1682084	.	+	.	ID=gene1690;Name=CleRt_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09500
NZ_CP011126.1	Protein Homology	CDS	1681872	1682084	.	+	0	ID=cds1635;Parent=gene1690;Dbxref=Genbank:WP_082160407.1;Name=WP_082160407.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00069.23;product=hypothetical protein;protein_id=WP_082160407.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1682507	1683001	.	-	.	ID=gene1691;Name=CleRt_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08520
NZ_CP011126.1	Protein Homology	CDS	1682507	1683001	.	-	0	ID=cds1636;Parent=gene1691;Dbxref=Genbank:WP_082160478.1;Name=WP_082160478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF01078.19;product=hypothetical protein;protein_id=WP_082160478.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1683029	1683352	.	-	.	ID=gene1692;Name=CleRt_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08525
NZ_CP011126.1	GeneMarkS+	CDS	1683029	1683352	.	-	0	ID=cds1637;Parent=gene1692;Dbxref=Genbank:WP_053097961.1;Name=WP_053097961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_053097961.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1683376	1683669	.	-	.	ID=gene1693;Name=CleRt_RS09505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09505;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1683376	1683669	.	-	0	ID=cds1638;Parent=gene1693;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017252741.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1683691	1683936	.	-	.	ID=gene1694;Name=CleRt_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07885;old_locus_tag=CleRT_15490
NZ_CP011126.1	Protein Homology	CDS	1683691	1683936	.	-	0	ID=cds1639;Parent=gene1694;Dbxref=Genbank:WP_048875703.1;Name=WP_048875703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006890914.1;product=hypothetical protein;protein_id=WP_048875703.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1684143	1685037	.	+	.	ID=gene1695;Name=CleRt_RS07890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07890;old_locus_tag=CleRT_15500;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1684143	1685037	.	+	0	ID=cds1640;Parent=gene1695;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011216794.1;product=cystathionine beta-lyase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1685072	1686207	.	+	.	ID=gene1696;Name=CleRt_RS07895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07895;old_locus_tag=CleRT_15510;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1685072	1686207	.	+	0	ID=cds1641;Parent=gene1696;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008027244.1;product=cystathionine beta-lyase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1686292	1686942	.	-	.	ID=gene1697;Name=CleRt_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07900;old_locus_tag=CleRT_15520
NZ_CP011126.1	Protein Homology	CDS	1686292	1686942	.	-	0	ID=cds1642;Parent=gene1697;Dbxref=Genbank:WP_048875704.1;Name=WP_048875704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958612.1;product=SH3 domain-containing protein;protein_id=WP_048875704.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1687486	1687707	.	-	.	ID=gene1698;Name=CleRt_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07905
NZ_CP011126.1	GeneMarkS+	CDS	1687486	1687707	.	-	0	ID=cds1643;Parent=gene1698;Dbxref=Genbank:WP_048875705.1;Name=WP_048875705.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875705.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1687709	1687891	.	-	.	ID=gene1699;Name=CleRt_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07910
NZ_CP011126.1	GeneMarkS+	CDS	1687709	1687891	.	-	0	ID=cds1644;Parent=gene1699;Dbxref=Genbank:WP_048875706.1;Name=WP_048875706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875706.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1688592	1689782	.	+	.	ID=gene1700;Name=CleRt_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07915;old_locus_tag=CleRT_15550
NZ_CP011126.1	Protein Homology	CDS	1688592	1689782	.	+	0	ID=cds1645;Parent=gene1700;Dbxref=Genbank:WP_048875707.1;Name=WP_048875707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769816.1;product=methionine adenosyltransferase;protein_id=WP_048875707.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1689809	1691104	.	+	.	ID=gene1701;Name=CleRt_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07920;old_locus_tag=CleRT_15560
NZ_CP011126.1	Protein Homology	CDS	1689809	1691104	.	+	0	ID=cds1646;Parent=gene1701;Dbxref=Genbank:WP_048875708.1;Name=WP_048875708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008283721.1;product=adenosylhomocysteinase;protein_id=WP_048875708.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1691111	1692063	.	+	.	ID=gene1702;Name=CleRt_RS07925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07925;old_locus_tag=CleRT_15570;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1691111	1692063	.	+	0	ID=cds1647;Parent=gene1702;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997438.1;product=sensor domain-containing diguanylate cyclase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1692410	1692592	.	-	.	ID=gene1703;Name=CleRt_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07930
NZ_CP011126.1	GeneMarkS+	CDS	1692410	1692592	.	-	0	ID=cds1648;Parent=gene1703;Dbxref=Genbank:WP_048875709.1;Name=WP_048875709.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875709.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1692793	1692984	.	+	.	ID=gene1704;Name=CleRt_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07935
NZ_CP011126.1	GeneMarkS+	CDS	1692793	1692984	.	+	0	ID=cds1649;Parent=gene1704;Dbxref=Genbank:WP_048875710.1;Name=WP_048875710.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875710.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1693169	1693928	.	+	.	ID=gene1705;Name=CleRt_RS09510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09510;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1693169	1693928	.	+	0	ID=cds1650;Parent=gene1705;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017253111.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1694015	1694269	.	+	.	ID=gene1706;Name=CleRt_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07940
NZ_CP011126.1	GeneMarkS+	CDS	1694015	1694269	.	+	0	ID=cds1651;Parent=gene1706;Dbxref=Genbank:WP_048875711.1;Name=WP_048875711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875711.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1694381	1694605	.	+	.	ID=gene1707;Name=CleRt_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09515
NZ_CP011126.1	Protein Homology	CDS	1694381	1694605	.	+	0	ID=cds1652;Parent=gene1707;Dbxref=Genbank:WP_082160514.1;Name=WP_082160514.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;product=ABC transporter ATP-binding protein;protein_id=WP_082160514.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1696219	1696326	.	+	.	ID=gene1708;Name=CleRt_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09520
NZ_CP011126.1	Protein Homology	CDS	1696219	1696326	.	+	0	ID=cds1653;Parent=gene1708;Dbxref=Genbank:WP_082160479.1;Name=WP_082160479.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00005.25;product=hypothetical protein;protein_id=WP_082160479.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1696842	1698179	.	+	.	ID=gene1709;Name=CleRt_RS07945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07945;old_locus_tag=CleRT_15600;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1696842	1698179	.	+	0	ID=cds1654;Parent=gene1709;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958618.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1698241	1698390	.	+	.	ID=gene1710;Name=CleRt_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09525
NZ_CP011126.1	Protein Homology	CDS	1698241	1698390	.	+	0	ID=cds1655;Parent=gene1710;Dbxref=Genbank:WP_082160480.1;Name=WP_082160480.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF00563.18;product=hypothetical protein;protein_id=WP_082160480.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1698959	1699756	.	-	.	ID=gene1711;Name=CleRt_RS07950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07950;old_locus_tag=CleRT_15620;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1698959	1699756	.	-	0	ID=cds1656;Parent=gene1711;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769837.1;product=methylenetetrahydrofolate reductase [NAD(P)H];pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1699843	1702026	.	-	.	ID=gene1712;Name=CleRt_RS07955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07955;old_locus_tag=CleRT_15630;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1699843	1702026	.	-	0	ID=cds1657;Parent=gene1712;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011588145.1;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1702335	1703408	.	-	.	ID=gene1713;Name=CleRt_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07960;old_locus_tag=CleRT_15640
NZ_CP011126.1	Protein Homology	CDS	1702335	1703408	.	-	0	ID=cds1658;Parent=gene1713;Dbxref=Genbank:WP_048875712.1;Name=WP_048875712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006035831.1;product=tryptophan--tRNA ligase;protein_id=WP_048875712.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1703465	1705648	.	+	.	ID=gene1714;Name=CleRt_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07965;old_locus_tag=CleRT_15650
NZ_CP011126.1	Protein Homology	CDS	1703465	1705648	.	+	0	ID=cds1659;Parent=gene1714;Dbxref=Genbank:WP_082160481.1;Name=WP_082160481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958624.1;product=DNA helicase II;protein_id=WP_082160481.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1705645	1706378	.	+	.	ID=gene1715;Name=CleRt_RS07970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS07970;old_locus_tag=CleRT_15660;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1705645	1706378	.	+	0	ID=cds1660;Parent=gene1715;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769852.1;product=zinc transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1706492	1706809	.	-	.	ID=gene1716;Name=CleRt_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS09530
NZ_CP011126.1	Protein Homology	CDS	1706492	1706809	.	-	0	ID=cds1661;Parent=gene1716;Dbxref=Genbank:WP_082160482.1;Name=WP_082160482.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF11308.6;product=hypothetical protein;protein_id=WP_082160482.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1707116	1707628	.	-	.	ID=gene1717;Name=CleRt_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07975
NZ_CP011126.1	GeneMarkS+	CDS	1707116	1707628	.	-	0	ID=cds1662;Parent=gene1717;Dbxref=Genbank:WP_048875713.1;Name=WP_048875713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875713.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1707969	1708151	.	-	.	ID=gene1718;Name=CleRt_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07980
NZ_CP011126.1	GeneMarkS+	CDS	1707969	1708151	.	-	0	ID=cds1663;Parent=gene1718;Dbxref=Genbank:WP_048875714.1;Name=WP_048875714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875714.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1708338	1708571	.	-	.	ID=gene1719;Name=CleRt_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07985
NZ_CP011126.1	GeneMarkS+	CDS	1708338	1708571	.	-	0	ID=cds1664;Parent=gene1719;Dbxref=Genbank:WP_048875715.1;Name=WP_048875715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875715.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1708836	1709021	.	+	.	ID=gene1720;Name=CleRt_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07990
NZ_CP011126.1	GeneMarkS+	CDS	1708836	1709021	.	+	0	ID=cds1665;Parent=gene1720;Dbxref=Genbank:WP_048875716.1;Name=WP_048875716.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875716.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1709173	1710489	.	-	.	ID=gene1721;Name=CleRt_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS07995;old_locus_tag=CleRT_15690
NZ_CP011126.1	Protein Homology	CDS	1709173	1710489	.	-	0	ID=cds1666;Parent=gene1721;Dbxref=Genbank:WP_048875717.1;Name=WP_048875717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997459.1;product=MFS transporter;protein_id=WP_048875717.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1710511	1711854	.	-	.	ID=gene1722;Name=CleRt_RS08000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08000;old_locus_tag=CleRT_15700;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1710511	1711854	.	-	0	ID=cds1667;Parent=gene1722;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769868.1;product=MFS transporter;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1712089	1712910	.	+	.	ID=gene1723;Name=CleRt_RS08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08005;old_locus_tag=CleRT_15710;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1712089	1712910	.	+	0	ID=cds1668;Parent=gene1723;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016859210.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1712954	1713148	.	+	.	ID=gene1724;Name=CleRt_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08010
NZ_CP011126.1	GeneMarkS+	CDS	1712954	1713148	.	+	0	ID=cds1669;Parent=gene1724;Dbxref=Genbank:WP_048875718.1;Name=WP_048875718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875718.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1713145	1713384	.	-	.	ID=gene1725;Name=CleRt_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08015;old_locus_tag=CleRT_15720
NZ_CP011126.1	Protein Homology	CDS	1713145	1713384	.	-	0	ID=cds1670;Parent=gene1725;Dbxref=Genbank:WP_048875719.1;Name=WP_048875719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006341780.1;product=hypothetical protein;protein_id=WP_048875719.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1713519	1714103	.	-	.	ID=gene1726;Name=CleRt_RS08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08020;old_locus_tag=CleRT_15730;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1713519	1714103	.	-	0	ID=cds1671;Parent=gene1726;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570549.1;product=thymidine kinase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1715755	1716232	.	+	.	ID=gene1727;Name=CleRt_RS08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08025;old_locus_tag=CleRT_15750;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1715755	1716232	.	+	0	ID=cds1672;Parent=gene1727;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012570551.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1716250	1717140	.	+	.	ID=gene1728;Name=CleRt_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08030;old_locus_tag=CleRT_15760
NZ_CP011126.1	Protein Homology	CDS	1716250	1717140	.	+	0	ID=cds1673;Parent=gene1728;Dbxref=Genbank:WP_048875720.1;Name=WP_048875720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005770350.1;product=acyltransferase;protein_id=WP_048875720.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1717140	1718079	.	+	.	ID=gene1729;Name=CleRt_RS08035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08035;old_locus_tag=CleRT_15770;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1717140	1718079	.	+	0	ID=cds1674;Parent=gene1729;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220008.1;product=hydroxymethylbilane synthase;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1718073	1718759	.	+	.	ID=gene1730;Name=CleRt_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08040;old_locus_tag=CleRT_15780
NZ_CP011126.1	Protein Homology	CDS	1718073	1718759	.	+	0	ID=cds1675;Parent=gene1730;Dbxref=Genbank:WP_048875721.1;Name=WP_048875721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769885.1;product=type I 3-dehydroquinate dehydratase;protein_id=WP_048875721.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1718824	1719165	.	+	.	ID=gene1731;Name=CleRt_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08045;old_locus_tag=CleRT_15790
NZ_CP011126.1	Protein Homology	CDS	1718824	1719165	.	+	0	ID=cds1676;Parent=gene1731;Dbxref=Genbank:WP_048875722.1;Name=WP_048875722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011997461.1;product=NGG1p interacting factor 3 protein%2C NIF3;protein_id=WP_048875722.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1719947	1720903	.	+	.	ID=gene1732;Name=CleRt_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08050;old_locus_tag=CleRT_15810
NZ_CP011126.1	Protein Homology	CDS	1719947	1720903	.	+	0	ID=cds1677;Parent=gene1732;Dbxref=Genbank:WP_048875723.1;Name=WP_048875723.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:PF04375.12;product=hypothetical protein;protein_id=WP_048875723.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1720900	1722078	.	+	.	ID=gene1733;Name=CleRt_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08055;old_locus_tag=CleRT_15820
NZ_CP011126.1	Protein Homology	CDS	1720900	1722078	.	+	0	ID=cds1678;Parent=gene1733;Dbxref=Genbank:WP_048875724.1;Name=WP_048875724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005772915.1;product=heme biosynthesis protein HemY;protein_id=WP_048875724.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1722088	1722880	.	+	.	ID=gene1734;Name=CleRt_RS08060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS08060;old_locus_tag=CleRT_15830;pseudo=true
NZ_CP011126.1	Protein Homology	CDS	1722088	1722880	.	+	0	ID=cds1679;Parent=gene1734;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769907.1;product=hypothetical protein;pseudo=true;transl_table=11
NZ_CP011126.1	RefSeq	gene	1722987	1723193	.	-	.	ID=gene1735;Name=CleRt_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08065;old_locus_tag=CleRT_15840
NZ_CP011126.1	GeneMarkS+	CDS	1722987	1723193	.	-	0	ID=cds1680;Parent=gene1735;Dbxref=Genbank:WP_048875725.1;Name=WP_048875725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875725.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1723787	1725043	.	-	.	ID=gene1736;Name=CleRt_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08070;old_locus_tag=CleRT_15850
NZ_CP011126.1	Protein Homology	CDS	1723787	1725043	.	-	0	ID=cds1681;Parent=gene1736;Dbxref=Genbank:WP_048875726.1;Name=WP_048875726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007192252.1;product=transcription termination factor Rho;protein_id=WP_048875726.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1725225	1725560	.	-	.	ID=gene1737;Name=CleRt_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08075;old_locus_tag=CleRT_15860
NZ_CP011126.1	Protein Homology	CDS	1725225	1725560	.	-	0	ID=cds1682;Parent=gene1737;Dbxref=Genbank:WP_048875727.1;Name=WP_048875727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958643.1;product=thioredoxin TrxA;protein_id=WP_048875727.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1725617	1726189	.	-	.	ID=gene1738;Name=CleRt_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08080;old_locus_tag=CleRT_15870
NZ_CP011126.1	Protein Homology	CDS	1725617	1726189	.	-	0	ID=cds1683;Parent=gene1738;Dbxref=Genbank:WP_048875728.1;Name=WP_048875728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769922.1;product=YggT family protein;protein_id=WP_048875728.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1727068	1727259	.	-	.	ID=gene1739;Name=CleRt_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08085
NZ_CP011126.1	GeneMarkS+	CDS	1727068	1727259	.	-	0	ID=cds1684;Parent=gene1739;Dbxref=Genbank:WP_048875729.1;Name=WP_048875729.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;product=hypothetical protein;protein_id=WP_048875729.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1727523	1728353	.	-	.	ID=gene1740;Name=CleRt_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08090;old_locus_tag=CleRT_15890
NZ_CP011126.1	Protein Homology	CDS	1727523	1728353	.	-	0	ID=cds1685;Parent=gene1740;Dbxref=Genbank:WP_048875730.1;Name=WP_048875730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769923.1;product=pyrroline-5-carboxylate reductase;protein_id=WP_048875730.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1728399	1729079	.	-	.	ID=gene1741;Name=CleRt_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08095;old_locus_tag=CleRT_15900
NZ_CP011126.1	Protein Homology	CDS	1728399	1729079	.	-	0	ID=cds1686;Parent=gene1741;Dbxref=Genbank:WP_048875731.1;Name=WP_048875731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769924.1;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_048875731.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1729106	1730656	.	-	.	ID=gene1742;Name=CleRt_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08100;old_locus_tag=CleRT_15910
NZ_CP011126.1	Protein Homology	CDS	1729106	1730656	.	-	0	ID=cds1687;Parent=gene1742;Dbxref=Genbank:WP_048875732.1;Name=WP_048875732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007017965.1;product=phosphoenolpyruvate carboxykinase;protein_id=WP_048875732.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1730761	1731312	.	+	.	ID=gene1743;Name=CleRt_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08105;old_locus_tag=CleRT_15920
NZ_CP011126.1	Protein Homology	CDS	1730761	1731312	.	+	0	ID=cds1688;Parent=gene1743;Dbxref=Genbank:WP_048875733.1;Name=WP_048875733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005769927.1;product=YqgE/AlgH family protein;protein_id=WP_048875733.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1731342	1731797	.	+	.	ID=gene1744;Name=CleRt_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08110;old_locus_tag=CleRT_15930
NZ_CP011126.1	Protein Homology	CDS	1731342	1731797	.	+	0	ID=cds1689;Parent=gene1744;Dbxref=Genbank:WP_048875839.1;Name=WP_048875839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011073217.1;product=Holliday junction resolvase RuvX;protein_id=WP_048875839.1;transl_table=11
NZ_CP011126.1	RefSeq	gene	1731790	1732740	.	+	.	ID=gene1745;Name=CleRt_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=CleRt_RS08115;old_locus_tag=CleRT_15940
NZ_CP011126.1	Protein Homology	CDS	1731790	1732740	.	+	0	ID=cds1690;Parent=gene1745;Dbxref=Genbank:WP_048875734.1;Name=WP_048875734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010958650.1;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_048875734.1;transl_table=11
NZ_CP011126.1	RefSeq	pseudogene	1732773	1733555	.	-	.	ID=gene1746;Name=CleRt_RS09535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=CleRt_RS09535;old_locus_tag=CleRT_15950;partial=true;pseudo=true;start_range=.,1732773
NZ_CP011126.1	Protein Homology	CDS	1732773	1733555	.	-	0	ID=cds1691;Parent=gene1746;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220366.1;partial=true;product=ATPase;pseudo=true;start_range=.,1732773;transl_table=11
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