locus strain_id interpro function go others RSDT_RS00005 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR024633 Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|DnaA N-terminal domain|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00308|PF08299|PF11638|PR00051|PS01008|SM00760|SSF48295 RSDT_RS00010 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003099|IPR008927|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 G3DSA:1.10.3660.10|G3DSA:3.40.50.720|PF02153|SSF48179|SSF51735 RSDT_RS00015 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001986|IPR006264|IPR013792 3-phosphoshikimate 1-carboxyvinyltransferase|Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0003866|GO:0009073|GO:0016765 G3DSA:3.65.10.10|MF_00210|PF00275|PIRSF000505|SSF55205 RSDT_RS00020 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001086|IPR002701|IPR002912|IPR008242|IPR020822 ACT domain|Bifunctional P-protein, chorismate mutase/prephenate dehydratase|Chorismate mutase|Chorismate mutase, type II|Prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094|GO:0046417 G3DSA:1.20.59.10|G3DSA:3.30.70.260|G3DSA:3.40.190.10|PF00800|PF01817|PF01842|PIRSF001500|SM00830|SSF48600|SSF53850|SSF55021 RSDT_RS00025 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002812|IPR013785 3-dehydroquinate synthase|Aldolase-type TIM barrel GO:0003824|GO:0003856|GO:0009073|GO:0016491|GO:0055114 G3DSA:3.20.20.70|PD017907|PF01959 RSDT_RS00030 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002915|IPR010210|IPR013785 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase|Aldolase-type TIM barrel|DeoC/FbaB/ lacD aldolase GO:0003824|GO:0009073|GO:0016829|GO:0016836 G3DSA:3.20.20.70|MF_00960|PF01791|PIRSF038992|SM01133|SSF51569|TIGR01949 RSDT_RS00035 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000897|IPR003593|IPR004125|IPR004780|IPR013822|IPR022941|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle protein Ffh|Signal recognition particle, SRP54 subunit|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, M-domain|Signal recognition particle, SRP54 subunit, helical bundle GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500 G3DSA:1.10.260.30|G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00306|PF00448|PF02881|PF02978|PS00300|SM00382|SM00962|SM00963|SSF47446|SSF52540|TIGR00959 RSDT_RS00040 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025877|IPR029044 MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF12804|SSF53448 RSDT_RS00045 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC TIGR03172 RSDT_RS00070 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002586|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236 G3DSA:3.40.50.300|G3DSA:3.40.50.880|PF01656|PF07685|SSF52317|SSF52540 RSDT_RS00075 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 G3DSA:3.40.50.10230|PF02570|SSF63965 RSDT_RS00080 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR021139|IPR029060 NYN domain, limkain-b1-type|PIN domain-like G3DSA:3.40.50.1010|PF01936 RSDT_RS00085 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001091|IPR002941|IPR029063 DNA methylase N-4/N-6|Restriction/modification DNA-methylase|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|PF01555|PR00508|SSF53335 RSDT_RS00100 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002052|IPR012327|IPR029063 D12 class N6 adenine-specific DNA methyltransferase|DNA methylase, N-6 adenine-specific, conserved site|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0009007|GO:0032259|GO:0032775 G3DSA:3.40.50.150|PF02086|PS00092|SSF53335 RSDT_RS00105 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR012327|IPR023095|IPR029063 Adenine-specific methyltransferase, domain 2|D12 class N6 adenine-specific DNA methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0009007|GO:0032775 G3DSA:1.10.1020.10|PF02086|SSF53335 RSDT_RS00120 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007197|IPR010722|IPR012726|IPR013785 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Radical SAM|Thiazole biosynthesis ThiH GO:0003824|GO:0005506|GO:0009228|GO:0051536|GO:0051539 G3DSA:3.20.20.70|PF04055|PF06968|SM00876|SSF102114|TIGR02351 RSDT_RS00130 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025166 Integrase, DNA-binding domain PF13356 RSDT_RS00135 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011991 Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13412|SSF46785 RSDT_RS00150 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PD968187|PF03601 RSDT_RS00160 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729 RSDT_RS00165 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001920|IPR004391|IPR015942|IPR018187|IPR033134 Asp/Glu racemase|Asp/Glu racemase, active site 1|Asp/Glu racemase, active site 2|Asp/Glu/hydantoin racemase|Glutamate racemase GO:0006807|GO:0008152|GO:0008881|GO:0009252|GO:0016855|GO:0036361 G3DSA:3.40.50.1860|MF_00258|PF01177|PS00923|PS00924|SSF53681|TIGR00067 RSDT_RS00170 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 RSDT_RS00175 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010139|IPR017926|IPR029062 Class I glutamine amidotransferase-like|Glutamine amidotransferase|Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 G3DSA:3.40.50.880|MF_00278|PF00117|PIRSF000495|SSF52317|TIGR01855 RSDT_RS00180 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004651|IPR006062|IPR011060|IPR013785 Aldolase-type TIM barrel|Histidine biosynthesis|Histidine biosynthesis, HisF|Ribulose-phosphate binding barrel GO:0000105|GO:0000107|GO:0003824|GO:0005737|GO:0008152 G3DSA:3.20.20.70|MF_01013|PF00977|SSF51366|TIGR00735 RSDT_RS00185 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain G3DSA:2.20.28.10|PF09723|SM00834|TIGR02605 RSDT_RS00190 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000362|IPR004769|IPR008948|IPR019468|IPR020557|IPR022761|IPR024083 Adenylosuccinate lyase|Adenylosuccinate lyase C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004018|GO:0009152 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10397|PR00145|PR00149|PS00163|SM00998|SSF48557|TIGR00928 RSDT_RS00195 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004467|IPR023031|IPR029057 Orotate phosphoribosyl transferase domain|Orotate phosphoribosyltransferase|Phosphoribosyltransferase-like GO:0004588|GO:0006221 G3DSA:3.40.50.2020|MF_01208|SSF53271|TIGR00336 RSDT_RS00205 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003728|IPR028989 Ribosome maturation factor RimP|Ribosome maturation factor RimP, N-terminal GO:0042274 G3DSA:3.30.300.70|MF_01077|PF02576|SSF75420 RSDT_RS00210 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003029|IPR004087|IPR009019|IPR010213|IPR012340|IPR013735|IPR015946|IPR022967|IPR025249|IPR030842 K Homology domain|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|KH domain, NusA-like|Nucleic acid-binding, OB-fold|RNA-binding domain, S1|S1 domain|Transcription factor NusA, N-terminal|Transcription termination factor NusA|Transcription termination/antitermination protein NusA, bacterial GO:0003676|GO:0003700|GO:0003723|GO:0006353|GO:0031554|GO:0031564 G3DSA:1.10.150.20|G3DSA:2.40.50.140|G3DSA:3.30.1480.10|G3DSA:3.30.300.20|MF_00945_B|PF00575|PF08529|PF13184|SM00316|SM00322|SSF50249|SSF54814|SSF69705|TIGR01953 RSDT_RS00215 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007393 Domain of unknown function DUF448 G3DSA:3.30.1230.10|PF04296|SSF64376 RSDT_RS00220 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000178|IPR000795|IPR005225|IPR006847|IPR009000|IPR023115|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation initiation factor IF- 2, domain 3|Translation initiation factor IF-2, N-terminal|Translation initiation factor aIF-2, bacterial-like|Translation protein, beta-barrel domain GO:0003743|GO:0003924|GO:0005525|GO:0005622|GO:0006413 G3DSA:2.40.30.10|G3DSA:3.30.56.50|G3DSA:3.40.50.10050|G3DSA:3.40.50.300|MF_00100_B|PF00009|PF04760|PF11987|PS01176|SSF50447|SSF52156|SSF52540|TIGR00231|TIGR00487 RSDT_RS00230 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001667|IPR003156 DDH domain|DHHA1 domain GO:0003676 G3DSA:3.90.1640.10|PF01368|PF02272|SSF64182 RSDT_RS00240 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006315|IPR011250|IPR027385 Outer membrane autotransporter barrel|Outer membrane protein beta-barrel|Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021|GO:0019867 G3DSA:2.40.128.130|PF13505|SSF56925|TIGR01414 RSDT_RS00245 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002478|IPR002501|IPR014780|IPR020103 PUA domain|Pseudouridine synthase II, N-terminal|Pseudouridine synthase, catalytic domain|tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0006396|GO:0009451|GO:0009982 G3DSA:2.30.130.10|G3DSA:3.30.2350.10|MF_01080|PF01509|SSF55120|TIGR00431 RSDT_RS00250 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000589|IPR005290|IPR009068 Ribosomal protein S15|Ribosomal protein S15, bacterial-type|S15/NS1, RNA-binding GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.10|MF_01343_B|PD157043|PF00312|PS00362|SM01387|SSF47060|TIGR00952 RSDT_RS00255 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001247|IPR003029|IPR004087|IPR004088|IPR012162|IPR012340|IPR015847|IPR015848|IPR020568|IPR022967|IPR027408 Exoribonuclease, phosphorolytic domain 1|Exoribonuclease, phosphorolytic domain 2|K Homology domain|K Homology domain, type 1|Nucleic acid-binding, OB-fold|PNPase/RNase PH domain|Polyribonucleotide nucleotidyltransferase|Polyribonucleotide nucleotidyltransferase, RNA-binding domain|RNA-binding domain, S1|Ribosomal protein S5 domain 2-type fold|S1 domain GO:0000175|GO:0003676|GO:0003723|GO:0004654|GO:0006396|GO:0006402 G3DSA:1.10.10.400|G3DSA:2.40.50.140|G3DSA:3.30.1370.10|G3DSA:3.30.230.70|MF_01595|PF00013|PF00575|PF01138|PF03725|PF03726|PIRSF005499|SM00316|SM00322|SSF50249|SSF54211|SSF54791|SSF55666|TIGR03591 RSDT_RS00265 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000352|IPR004373|IPR005139 Peptide chain release factor|Peptide chain release factor 1|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|MF_00093|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00019 RSDT_RS00270 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010787 Protein of unknown function DUF1385 PD131510|PF07136 RSDT_RS00275 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002150|IPR027491|IPR034704 L28p-like|Ribosomal protein L31|Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00501|PF01197|PR01249|PS01143|SSF143800|TIGR00105 RSDT_RS00280 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000644|IPR002550|IPR013785 Aldolase-type TIM barrel|CBS domain|Domain of unknown function DUF21 GO:0003824 G3DSA:3.20.20.70|PF00571|PF01595|SSF54631 RSDT_RS00285 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|SSF53738|SSF55957 RSDT_RS00290 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 RSDT_RS00300 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005900|IPR006148 6-phosphogluconolactonase, DevB-type|Glucosamine/galactosamine-6-phosphate isomerase GO:0005975|GO:0006098|GO:0017057 G3DSA:3.40.50.1360|PF01182|SSF100950|TIGR01198 RSDT_RS00305 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003418|IPR034804 Fumarate reductase, subunit D|Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0006106|GO:0016020 G3DSA:1.20.1300.10|PD015693|PF02313|SSF81343 RSDT_RS00310 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003510|IPR034804 Fumarate reductase, subunit C|Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 G3DSA:1.20.1300.10|PD015900|PF02300|PIRSF000180|SSF81343 RSDT_RS00315 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001041|IPR004489|IPR006058|IPR009051|IPR012675|IPR017896|IPR017900|IPR025192 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Beta-grasp domain|Succinate dehydogenase/fumarate reductase N-terminal|Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0009055|GO:0016491|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.10.20.30|PF13085|PF13183|PS00197|PS00198|SSF46548|SSF54292|TIGR00384 RSDT_RS00320 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003952|IPR003953|IPR005884|IPR014006|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase, flavoprotein subunit|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Fumarate reductase/succinate dehydrogenase, FAD-binding site|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain|Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0016627|GO:0022900|GO:0050660|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:4.10.80.40|PF00890|PF02910|PIRSF000171|PR00368|PR00411|PS00504|SSF46977|SSF51905|SSF56425|TIGR01176|TIGR01812 RSDT_RS00325 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018657 LarA-like, N-terminal G3DSA:3.40.50.720|PF09861 RSDT_RS00330 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001898|IPR030676 Citrate carrier CitT-related|Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 PF00939|PIRSF002457|TIGR00785 RSDT_RS00335 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 G3DSA:3.20.130.10|PF05683|SSF117457|TIGR00723 RSDT_RS00340 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 PF05681|TIGR00722 RSDT_RS00345 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001036|IPR004763|IPR027463 Acriflavin resistance protein|Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0006812|GO:0008324|GO:0016020|GO:0016021 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00914 RSDT_RS00350 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0005215|GO:0016020|GO:0055085 G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 RSDT_RS00355 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR021647 Copper binding periplasmic protein CusF PF11604 RSDT_RS00360 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01845 RSDT_RS00375 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001098|IPR002298|IPR002421|IPR008918|IPR012337|IPR019760|IPR020045|IPR020046|IPR029060 5'-3' exonuclease, C-terminal domain|5'-3' exonuclease, N-terminal|5'-3' exonuclease, alpha-helical arch, N-terminal|DNA polymerase A|DNA-directed DNA polymerase, family A, conserved site|DNA-directed DNA polymerase, family A, palm domain|Helix-hairpin-helix motif, class 2|PIN domain-like|Ribonuclease H-like domain GO:0003676|GO:0003677|GO:0003824|GO:0003887|GO:0006260|GO:0006261 G3DSA:1.10.150.20|G3DSA:1.20.1060.10|G3DSA:3.30.420.10|G3DSA:3.30.70.370|G3DSA:3.40.50.1010|PF00476|PF01367|PF02739|PR00868|PS00447|SM00279|SM00475|SM00482|SSF47807|SSF56672|SSF88723 RSDT_RS00380 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003798 DNA recombination RmuC G3DSA:1.20.5.1230|PF02646 RSDT_RS00385 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 PF01914|TIGR00427 RSDT_RS00395 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003812 Fido domain G3DSA:1.10.3290.10|PF02661|SSF140931 RSDT_RS00400 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000962|IPR012784 RNA polymerase-binding transcription factor DksA|Zinc finger, DksA/TraR C4-type GO:0008270 MF_00926|PF01258|SSF109635|SSF57716|TIGR02420 RSDT_RS00405 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005771|IPR005835|IPR029044 Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011|GO:0009058|GO:0016779 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR01099 RSDT_RS00410 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018711 Phosphodiester glycosidase PF09992 RSDT_RS00425 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003770 Endolytic murein transglycosylase G3DSA:3.30.160.60|MF_02065|PF02618|TIGR00247 RSDT_RS00430 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005227|IPR006641|IPR012337 Putative pre-16S rRNA nuclease|Ribonuclease H-like domain|YqgF/RNase H-like domain GO:0003676|GO:0006139|GO:0006364 G3DSA:3.30.420.140|MF_00651|PF03652|SM00732|SSF53098|TIGR00250 RSDT_RS00435 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001412|IPR002305|IPR002306|IPR014729 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|Rossmann-like alpha/beta/alpha sandwich fold|Tryptophan-tRNA ligase GO:0000166|GO:0004812|GO:0004830|GO:0005524|GO:0005737|GO:0006418|GO:0006436 G3DSA:1.10.240.10|G3DSA:3.40.50.620|PF00579|PR01039|PS00178|SSF52374|TIGR00233 RSDT_RS00440 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008915 Peptidase M50 GO:0004222|GO:0006508 PF02163 RSDT_RS00445 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000891|IPR002034|IPR005675|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Citramalate synthase|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|PF00682|PF08502|PS00815|SM00917|SSF110921|SSF51569|TIGR00977 RSDT_RS00450 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002810 NfeD-like, C-terminal domain G3DSA:2.40.50.140|PF01957|SSF141322 RSDT_RS00455 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001107|IPR001972|IPR032435 Band 7 domain|Band 7, C-terminal extension|Stomatin family GO:0016020 PF01145|PF16200|PR00721|SM00244|SSF117892 RSDT_RS00465 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005300|IPR009009|IPR010611|IPR026044 3D domain|Lytic transglycosylase MltA, domain B|Membrane-bound lytic murein transglycosylase A|RlpA-like protein, double-psi beta-barrel domain GO:0004553|GO:0009254|GO:0019867 G3DSA:2.40.240.50|PF03562|PF06725|PIRSF019422|SM00925|SSF50685 RSDT_RS00470 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002322|IPR011031|IPR020942 Class III cytochrome C|Cytochrome c, class III|Multihaem cytochrome GO:0009055|GO:0020037 G3DSA:3.90.10.10|PF02085|PR00609|SSF48695 RSDT_RS00475 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000878|IPR006363|IPR014776|IPR014777 Precorrin-3B C17-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|SSF53790|TIGR01466 RSDT_RS00480 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002750|IPR021744 CobE/GbiG C-terminal domain|Cobalamin synthesis G, N-terminal GO:0009236 G3DSA:3.30.420.180|PF01890|PF11760|SSF159664|SSF159672 RSDT_RS00485 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004639|IPR005814|IPR015421|IPR015422|IPR015424 Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2|Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0003824|GO:0008483|GO:0030170|GO:0033014|GO:0042286 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00375|PF00202|PS00600|SSF53383|TIGR00713 RSDT_RS00490 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006190|IPR013132|IPR013785|IPR013974 Aldolase-type TIM barrel|Antifreeze-like/N-acetylneuraminic acid synthase C-terminal|N-acetylneuraminic acid synthase, N-terminal|SAF domain GO:0003824|GO:0016051 G3DSA:3.20.20.70|G3DSA:3.90.1210.10|PF03102|PF08666|SM00858|SSF51269|SSF51569 RSDT_RS00495 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR027603 Putative transferase, LIC12162 family G3DSA:3.40.50.2000|TIGR04331 RSDT_RS00500 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006597 Sel1-like repeat G3DSA:2.60.40.1180|PF08238|SM00671|SSF81901 RSDT_RS00505 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002820|IPR023045 Molybdenum cofactor biosynthesis C|Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 G3DSA:3.30.70.640|MF_01224_B|PF01967|SSF55040|TIGR00581 RSDT_RS00510 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 MF_01147|PF01790|PS01311|TIGR00544 RSDT_RS00515 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000184|IPR010827|IPR023707 Bacterial surface antigen (D15)|Outer membrane protein assembly factor BamA|POTRA domain, BamA/TamA-like GO:0019867|GO:0071709 G3DSA:2.40.160.50|G3DSA:3.10.20.310|G3DSA:3.40.50.10070|PF01103|PF07244|PIRSF006076|TIGR03303 RSDT_RS00520 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS00525 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003838|IPR011925|IPR025857 ABC transporter permease protein domain|Lipoprotein-releasing system transmembrane protein LolC/E|MacB-like periplasmic core domain GO:0016020|GO:0016021|GO:0042953|GO:0042954 PF02687|PF12704|TIGR02212 RSDT_RS00530 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002313|IPR004364|IPR004365|IPR012340|IPR018149 Aminoacyl-tRNA synthetase, class II (D/K/N)|Lysine-tRNA ligase, class II|Lysyl-tRNA synthetase, class II, C-terminal|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004824|GO:0005524|GO:0005737|GO:0006418|GO:0006430 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00252|PF00152|PF01336|PR00982|SSF50249|SSF55681|TIGR00499 RSDT_RS00535 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001852|IPR011060|IPR013785|IPR033755 Aldolase-type TIM barrel|PdxS/SNZ N-terminal domain|Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ|Ribulose-phosphate binding barrel GO:0003824|GO:0008152|GO:0042819|GO:0042823 G3DSA:3.20.20.70|MF_01824|PF01680|PIRSF029271|PS01235|SSF51366|TIGR00343 RSDT_RS00540 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002161|IPR021196|IPR029062 Class I glutamine amidotransferase-like|PdxT/SNO family, conserved site|Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 G3DSA:3.40.50.880|MF_01615|PF01174|PIRSF005639|PS01236|SSF52317|TIGR03800 RSDT_RS00550 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002830|IPR012349 FMN-binding split barrel|UbiD decarboxylyase family GO:0016831|GO:0048037 G3DSA:3.40.1670.10|PF01977|SSF143968|SSF50475 RSDT_RS00555 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011051|IPR013096|IPR014710 Cupin 2, conserved barrel|RmlC-like cupin domain|RmlC-like jelly roll fold G3DSA:2.60.120.10|PF07883|SSF51182 RSDT_RS00570 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000891|IPR013785|IPR029151|IPR033479 Aldolase-type TIM barrel|Double Cache domain 1|Periplasmic sensor domain-like|Pyruvate carboxyltransferase GO:0003824 G3DSA:3.20.20.70|G3DSA:3.30.450.20|PF00682|PF02743|SSF103190|SSF51569 RSDT_RS00575 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|PF00180|PS00470|SM01329|SSF53659 RSDT_RS00580 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001030|IPR015928|IPR015931|IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Aconitase/3-isopropylmalate dehydratase, swivel GO:0008152 G3DSA:3.20.19.10|G3DSA:3.30.499.10|G3DSA:3.40.1060.10|PF00330|PR00415|SSF52016|SSF53732 RSDT_RS00590 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 RSDT_RS00595 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004843|IPR029052 Calcineurin-like phosphoesterase domain, ApaH type|Metallo-dependent phosphatase-like GO:0016787 G3DSA:3.60.21.10|PF00149|SSF56300 RSDT_RS00600 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR015421|IPR015422|IPR015424 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|SSF53383 RSDT_RS00605 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR015421|IPR015422|IPR015424|IPR020581|IPR023010 Glycine cleavage system P protein|Probable glycine dehydrogenase (decarboxylating) subunit 1|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0004375|GO:0006546|GO:0009116|GO:0055114 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00712|PF02347|PIRSF006815|SSF53383 RSDT_RS00610 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002930|IPR003016|IPR011053|IPR017453|IPR033753 2-oxo acid dehydrogenase, lipoyl-binding site|Glycine cleavage system H-protein|Glycine cleavage system H-protein, subgroup|Glycine cleavage system H-protein/Simiate|Single hybrid motif GO:0005960|GO:0019464 G3DSA:2.40.50.100|MF_00272|PF01597|PS00189|SSF51230|TIGR00527 RSDT_RS00615 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006222|IPR006223|IPR013977|IPR029043 Glycine cleavage T-protein, C-terminal barrel domain|Glycine cleavage T-protein-like, N-terminal|Glycine cleavage T-protein/YgfZ, C-terminal domain|Glycine cleavage system T protein GO:0004047|GO:0006546 G3DSA:2.40.30.110|G3DSA:3.30.1360.120|G3DSA:4.10.1250.10|PF01571|PF08669|PIRSF006487|SSF101790|SSF103025|TIGR00528 RSDT_RS00620 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004143|IPR004562|IPR019491 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain|Lipoate protein ligase, C-terminal|Lipoyltransferase/lipoate-protein ligase GO:0006464|GO:0009249 G3DSA:3.30.390.50|G3DSA:3.30.930.10|PF03099|PF10437|SSF55681|SSF82649|TIGR00545 RSDT_RS00625 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001130|IPR015991|IPR018228|IPR032466 Deoxyribonuclease, TatD-related, conserved site|Metal-dependent hydrolase|TatD family|Uncharacterised hydrolase TatD-type GO:0004536|GO:0016788|GO:0016888 G3DSA:3.20.20.140|PF01026|PIRSF005902|PS01090|PS01091|SSF51556|TIGR00010 RSDT_RS00635 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR016040 NAD(P)-binding domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|SSF51735 RSDT_RS00650 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000581|IPR004404|IPR015928|IPR020558 Aconitase/3-isopropylmalate dehydratase, swivel|Dihydroxy-acid dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase|Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0004160|GO:0008152|GO:0009082 MF_00012|PF00920|PS00886|PS00887|SSF143975|SSF52016|TIGR00110 RSDT_RS00655 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000924|IPR004514|IPR011035|IPR014729|IPR020056|IPR020058|IPR020059|IPR020061|IPR022861 Glutamine-tRNA ligase, bacterial|Glutamine-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004819|GO:0005524|GO:0005737|GO:0006412|GO:0006418|GO:0006425|GO:0016876|GO:0043039 G3DSA:1.10.1160.10|G3DSA:2.40.240.10|G3DSA:3.40.50.620|MF_00126|PF00749|PF03950|PR00987|SSF50715|SSF52374|TIGR00440 RSDT_RS00665 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001977|IPR002942|IPR006145|IPR006224|IPR006225|IPR020103|IPR027417 Dephospho-CoA kinase|P-loop containing nucleoside triphosphate hydrolase|Pseudouridine synthase, RluC/RluD|Pseudouridine synthase, RluC/RluD, conserved site|Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0004140|GO:0005524|GO:0009451|GO:0009982|GO:0015937 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|G3DSA:3.40.50.300|MF_00376|PF00849|PF01121|PS01129|SM00363|SSF52540|SSF55120|SSF55174|TIGR00005 RSDT_RS00670 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000064|IPR025606|IPR027017 Endopeptidase, NLPC/P60 domain|NLPC/P60, N-terminal domain|Uncharacterised peptidase with NlpC/P60 domain, YkfC type G3DSA:3.90.1720.10|PF00877|PF12912|PF12913|PIRSF019015|SSF54001 RSDT_RS00675 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001584|IPR012337 Integrase, catalytic core|Ribonuclease H-like domain GO:0003676|GO:0015074 G3DSA:3.30.420.10|PF13683|SSF53098 RSDT_RS00680 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013974 SAF domain SM00858 RSDT_RS00685 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 PF04295 RSDT_RS00695 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005064 Bordetella uptake gene GO:0030288 G3DSA:3.40.190.10|PF03401|PIRSF017082|SSF53850 RSDT_RS00700 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002823|IPR009936 Protein of unknown function DUF112, transmembrane|Protein of unknown function DUF1468 PF01970|PF07331 RSDT_RS00705 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1530.10|PF02615|SSF89733 RSDT_RS00710 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 G3DSA:3.30.1370.60|PF02615|SSF89733 RSDT_RS00715 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR020846 Major facilitator superfamily domain SSF103473 RSDT_RS00720 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 RSDT_RS00725 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005586 ABC-type transport auxiliary lipoprotein component G3DSA:3.40.50.10610|PF03886|SSF159594 RSDT_RS00730 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003399 Mce/MlaD PF02470 RSDT_RS00735 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS00740 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 PF02405 RSDT_RS00755 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006638|IPR007197|IPR013785|IPR018768|IPR023862 Aldolase-type TIM barrel|Conserved hypothetical protein CHP03960, radical SAM|Domain of unknown function DUF2344|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF10105|SM00729|SSF102114|TIGR03936|TIGR03960 RSDT_RS00760 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:2.30.30.100 RSDT_RS00765 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000999|IPR011907|IPR014720 Double-stranded RNA-binding domain|Ribonuclease III|Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396|GO:0016075 G3DSA:1.10.1520.10|G3DSA:3.30.160.20|MF_00104|PF00035|PF14622|PS00517|SM00358|SM00535|SSF54768|SSF69065|TIGR02191 RSDT_RS00775 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027417|IPR027543 AAA+ ATPase domain|ATPase, AAA-type, core|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|Lon, substrate-binding domain|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon proteolytic domain|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 G3DSA:1.10.4060.10|G3DSA:1.10.8.60|G3DSA:2.30.130.40|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 RSDT_RS00780 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003593|IPR003959|IPR004487|IPR010603|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp protease, ATP-binding subunit ClpX|P-loop containing nucleoside triphosphate hydrolase|Zinc finger, ClpX C4-type GO:0005524|GO:0006457|GO:0008270|GO:0046983|GO:0051082 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00175|PF06689|PF07724|PF10431|SM00382|SM00994|SM01086|SSF52540|SSF57716|TIGR00382 RSDT_RS00785 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001907|IPR018215|IPR023562|IPR029045|IPR033135 ATP-dependent Clp protease proteolytic subunit|Clp protease proteolytic subunit /Translocation-enhancing protein TepA|ClpP, Ser active site|ClpP, histidine active site|ClpP/crotonase-like domain GO:0004252|GO:0006508 G3DSA:3.90.226.10|MF_00444|PF00574|PR00127|PS00381|PS00382|SSF52096 RSDT_RS00790 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005215|IPR008880|IPR008881|IPR027304 Trigger factor|Trigger factor, C-terminal|Trigger factor, ribosome-binding, bacterial|Trigger factor/SurA domain GO:0006457|GO:0015031 G3DSA:1.10.3120.10|G3DSA:3.30.70.1050|MF_00303|PF05697|PF05698|PIRSF003095|SSF102735|SSF109998|SSF54534|TIGR00115 RSDT_RS00800 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001544|IPR005785|IPR018300 Aminotransferase class IV|Aminotransferase, class IV, conserved site|Branched-chain amino acid aminotransferase I GO:0003824|GO:0004084|GO:0008152|GO:0009081 G3DSA:3.20.10.10|G3DSA:3.30.470.10|PF01063|PS00770|SSF56752|TIGR01122 RSDT_RS00805 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003593|IPR008921|IPR012763|IPR022754|IPR027417 AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|DNA polymerase III, gamma subunit, domain III|DNA polymerase III, subunit gamma/ tau|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0005524|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF12169|PF13177|SM00382|SSF48019|SSF52540|TIGR02397 RSDT_RS00810 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004401 Nucleoid-associated protein YbaB/EbfC family G3DSA:3.30.1310.10|MF_00274|PF02575|PIRSF004555|SSF82607|TIGR00103 RSDT_RS00815 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000093|IPR006171|IPR023627|IPR023628 DNA recombination protein RecR|Recombination protein RecR|Recombination protein RecR, C4-type zinc finger|TOPRIM domain GO:0003677|GO:0006281|GO:0006310 G3DSA:3.40.1360.10|MF_00017|PF02132|PF13662|SSF111304|TIGR00615 RSDT_RS00820 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|SSF54001 RSDT_RS00825 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic PF13358 RSDT_RS00830 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001412|IPR002305|IPR002307|IPR002942|IPR014729|IPR024108 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ic|RNA-binding S4 domain|Rossmann-like alpha/beta/alpha sandwich fold|Tyrosine-tRNA ligase|Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0000166|GO:0003723|GO:0004812|GO:0004831|GO:0005524|GO:0005737|GO:0006418|GO:0006437 G3DSA:1.10.240.10|G3DSA:3.10.290.10|G3DSA:3.40.50.620|MF_02007|PF00579|PF01479|PR01040|PS00178|SM00363|SSF52374|SSF55174|TIGR00234 RSDT_RS00835 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007160|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Domain of unknown function DUF362 G3DSA:1.10.1060.10|G3DSA:3.30.70.20|PF04015|PF13237|PS00198|SSF54862 RSDT_RS00840 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR016181|IPR016732|IPR024320 Acyl-CoA N-acyltransferase|Phosphatidylglycerol lysyltransferase, C-terminal|Uncharacterised conserved protein UCP018688 G3DSA:3.40.630.30|PF09924|PIRSF018688|SSF55729 RSDT_RS00845 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 RSDT_RS00850 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003200|IPR017846|IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic|Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009163|GO:0009236 G3DSA:1.10.1610.10|G3DSA:3.40.50.10210|MF_00230|PF02277|SSF52733|TIGR03160 RSDT_RS00855 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001478|IPR001940|IPR009003 PDZ domain|Peptidase S1, PA clan|Peptidase S1C GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494 RSDT_RS00860 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13237|PS00198|SSF54862 RSDT_RS00865 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005358 Putative zinc- or iron-chelating domain containing protein PF03692 RSDT_RS00875 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|PF14559|SM00028|SSF48452 RSDT_RS00880 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002941|IPR029063 DNA methylase N-4/N-6|S-adenosyl-L-methionine-dependent methyltransferase GO:0003677|GO:0006306|GO:0008170 G3DSA:3.40.50.150|PF01555|SSF53335 RSDT_RS00885 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR019045 Restriction endonuclease, type II, TdeIII GO:0003677|GO:0009036|GO:0009307 PF09520 RSDT_RS00890 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004383|IPR007197|IPR013785|IPR027492 Aldolase-type TIM barrel|Dual-specificity RNA methyltransferase RlmN|Radical SAM|Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0003824|GO:0005737|GO:0006364|GO:0008173|GO:0030488|GO:0051536|GO:0070475 G3DSA:3.20.20.70|MF_01849|PF04055|PIRSF006004|SSF102114|TIGR00048 RSDT_RS00895 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001667 DDH domain G3DSA:3.90.1640.10|PF01368|SSF64182 RSDT_RS00905 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007863|IPR011249|IPR011765|IPR013578 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal|Peptidase M16C associated GO:0003824|GO:0006508|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|PF08367|SM01264|SSF63411 RSDT_RS00910 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004136|IPR013785 Aldolase-type TIM barrel|Nitronate monooxygenase GO:0003824|GO:0018580|GO:0055114 G3DSA:3.20.20.70|PF03060|SSF51412 RSDT_RS00920 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002591|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824|GO:0008152 G3DSA:3.40.720.10|PF01663|SSF53649 RSDT_RS00925 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.20.370|SSF88713 RSDT_RS00930 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006839|IPR023153 PSPTO4464-like domain|Ribosome-associated, YjgA G3DSA:1.10.60.30|PF04751|SSF158710 RSDT_RS00935 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000537|IPR006371 4-hydroxybenzoate polyprenyltransferase-related|UbiA prenyltransferase family GO:0016021|GO:0016765 PF01040|TIGR01475 RSDT_RS00940 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001453 MoaB/Mog domain G3DSA:3.40.980.10|PF00994|SM00852|SSF53218 RSDT_RS00945 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR016856|IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF|NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0033739|GO:0046857|GO:0055114 G3DSA:3.30.1130.10|MF_00818|PF14489|PIRSF027377|SSF55620|TIGR03139 RSDT_RS00950 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000897|IPR003593|IPR004390|IPR013822|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|Signal recognition particle, SRP54 subunit, GTPase domain|Signal recognition particle, SRP54 subunit, helical bundle|Signal-recognition particle receptor FtsY GO:0005525|GO:0006614 G3DSA:1.20.120.140|G3DSA:3.40.50.300|MF_00920|PF00448|PF02881|SM00382|SM00962|SM00963|SSF47364|SSF52540|TIGR00064 RSDT_RS00965 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:3.30.2310.20 RSDT_RS00970 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001915|IPR022919 Peptidase M48|Peptidase M48, protease HtpX, putative GO:0004222|GO:0006508 G3DSA:3.30.2010.10|MF_00188|PF01435 RSDT_RS00980 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001509|IPR005886|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase|UDP-glucose 4-epimerase GO:0003824|GO:0003978|GO:0006012|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735|TIGR01179 RSDT_RS00990 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008523 Protein of unknown function DUF805 GO:0016021 PF05656 RSDT_RS01000 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|SSF56954 RSDT_RS01005 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001279|IPR001587|IPR004613|IPR011108|IPR030854 Metallo-beta-lactamase|Ribonuclease J|Ribonuclease J, bacteria|Ribonuclease J, conserved site|Zn-dependent metallo-hydrolase, RNA specificity domain GO:0003723|GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0046872|GO:0090501 G3DSA:3.60.15.10|MF_01491|PF07521|PF12706|PIRSF004803|PS01292|SM00849|SSF56281|TIGR00649 RSDT_RS01015 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR021139|IPR029060 NYN domain, limkain-b1-type|PIN domain-like G3DSA:3.40.50.1010|PF01936 RSDT_RS01020 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 G3DSA:3.40.50.10800|PF02445|SSF142754 RSDT_RS01025 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003772 Large ribosomal RNA subunit accumulation protein YceD PF02620 RSDT_RS01030 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 MF_00024|PF03186 RSDT_RS01035 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001537|IPR016914|IPR029026|IPR029028 Alpha/beta knot methyltransferases|tRNA (cytidine/uridine-2'-O-)-methyltransferase|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0001510|GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.40.1280.10|MF_01885|PF00588|PIRSF029256|SSF75217 RSDT_RS01040 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002821|IPR008040 Hydantoinase/oxoprolinase|Hydantoinaseoxoprolinase, N-terminal GO:0016787 G3DSA:3.30.420.40|PF01968|PF05378|SSF53067 RSDT_RS01045 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003136|IPR011994|IPR027417 Cytidylate kinase|Cytidylate kinase domain|P-loop containing nucleoside triphosphate hydrolase GO:0004127|GO:0005524|GO:0006139 G3DSA:3.40.50.300|MF_00238|PF02224|SSF52540|TIGR00017 RSDT_RS01050 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001917|IPR004839|IPR005861|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Histidinol-phosphate aminotransferase family|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0000105|GO:0003824|GO:0004400|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01023|PF00155|PS00599|SSF53383|TIGR01141 RSDT_RS01055 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006015|IPR006016|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|Universal stress protein A|UspA GO:0006950 G3DSA:3.40.50.620|PF00582|PIRSF006276|PR01438|SSF52402 RSDT_RS01060 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001412|IPR002300|IPR002303|IPR009008|IPR009080|IPR010978|IPR013155|IPR014729|IPR019499 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valine-tRNA ligase|Valyl-tRNA synthetase, tRNA-binding arm|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|tRNA-binding arm GO:0000166|GO:0002161|GO:0004812|GO:0004832|GO:0005524|GO:0005737|GO:0006418|GO:0006438 G3DSA:1.10.287.380|G3DSA:1.10.730.10|G3DSA:3.40.50.620|MF_02004|PF00133|PF08264|PF10458|PR00986|PS00178|SSF46589|SSF47323|SSF50677|SSF52374|TIGR00422 RSDT_RS01065 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR029062 Class I glutamine amidotransferase-like G3DSA:3.40.50.880|SSF52317 RSDT_RS01075 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR019302 Nucleotide-binding protein, predicted, TIR-like domain PF10137 RSDT_RS01080 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000623|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|SSF52540 RSDT_RS01085 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MF_01398|PF00430 RSDT_RS01090 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 MF_01398|PF00430 RSDT_RS01095 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000711|IPR026015 ATPase, OSCP/delta subunit|F1F0 ATP synthase OSCP/delta subunit, N-terminal domain GO:0015986|GO:0046933 G3DSA:1.10.520.20|MF_01416|PF00213|PR00125|SSF47928|TIGR01145 RSDT_RS01100 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000194|IPR000793|IPR004100|IPR005294|IPR020003|IPR023366|IPR027417 ATP synthase subunit alpha-like domain|ATP synthase, F1 complex, alpha subunit|ATP synthase, alpha subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015992|GO:0045261|GO:0046034|GO:0046933 G3DSA:1.20.150.20|G3DSA:2.40.30.20|G3DSA:3.40.50.300|MF_01346|PF00006|PF00306|PF02874|PIRSF039088|PS00152|SSF47917|SSF50615|SSF52540|TIGR00962 RSDT_RS01105 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000131|IPR023632 ATP synthase, F1 complex, gamma subunit|ATP synthase, F1 complex, gamma subunit conserved site GO:0015986|GO:0045261|GO:0046933 G3DSA:1.10.287.80|MF_00815|PF00231|PR00126|PS00153|SSF52943|TIGR01146 RSDT_RS01110 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000194|IPR003593|IPR004100|IPR005722|IPR020003|IPR024034|IPR027417 AAA+ ATPase domain|ATP synthase, F1 complex, beta subunit|ATPase, F1/V1 complex, beta/alpha subunit, C-terminal|ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|ATPase, alpha/beta subunit, nucleotide-binding domain, active site|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0015986|GO:0015992|GO:0045261|GO:0046034|GO:0046933 G3DSA:1.10.1140.10|G3DSA:2.40.10.170|G3DSA:3.40.50.300|MF_01347|PF00006|PF02874|PIRSF039072|PS00152|SM00382|SSF47917|SSF50615|SSF52540|TIGR01039 RSDT_RS01115 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001469|IPR020546|IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain|ATP synthase, F1 complex, delta/epsilon subunit|ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933 G3DSA:1.20.5.440|G3DSA:2.60.15.10|MF_00530|PD000944|PF00401|PF02823|SSF46604|SSF51344|TIGR01216 RSDT_RS01120 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002562|IPR012337 3'-5' exonuclease domain|Ribonuclease H-like domain GO:0003676|GO:0006139|GO:0008408 G3DSA:3.30.420.10|PF01612|SM00474|SSF53098 RSDT_RS01125 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004520|IPR005225|IPR006073|IPR018948|IPR025867|IPR027417 GTP binding domain|GTP-binding protein TrmE, N-terminal|MnmE, helical domain|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 G3DSA:1.20.120.430|G3DSA:3.30.1360.120|MF_00379|PF01926|PF10396|PF12631|SSF103025|SSF52540|TIGR00231|TIGR00450 RSDT_RS01130 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001374|IPR015946|IPR032782 Jag, N-terminal|K homology domain-like, alpha/beta|R3H domain GO:0003676 G3DSA:3.30.1370.50|G3DSA:3.30.30.80|G3DSA:3.30.300.20|PF01424|PF13083|PF14804|SM00393|SM01245|SSF82708 RSDT_RS01135 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001708|IPR019998|IPR028053|IPR028055 Membrane insertase OXA1/ALB3/YidC|Membrane insertase YidC|Membrane insertase YidC, N-terminal|Membrane insertase YidC/Oxa1, C-terminal GO:0016021|GO:0051205 MF_01810|PF02096|PF14849|PR00701|PR01900|TIGR03592|TIGR03593 RSDT_RS01140 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002696 Putative membrane protein insertion efficiency factor MF_00386|PD004225|PF01809|SM01234|TIGR00278 RSDT_RS01145 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000100|IPR014721|IPR020539|IPR020568 Ribonuclease P|Ribonuclease P, conserved site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0000049|GO:0004526|GO:0008033 G3DSA:3.30.230.10|MF_00227|PD003629|PF00825|PS00648|SSF54211|TIGR00188 RSDT_RS01150 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000271|IPR020939 Ribosomal protein L34|Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00391|PD003101|PF00468|PS00784|TIGR01030 RSDT_RS01165 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003716|IPR006110|IPR012293 DNA-directed RNA polymerase, omega subunit|RNA polymerase subunit, RPB6/omega|RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 G3DSA:3.90.940.10|MF_00366|PF01192|SM01409|SSF63562|TIGR00690 RSDT_RS01170 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001305|IPR001623|IPR002939|IPR008971|IPR012724|IPR018253 Chaperone DnaJ|Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding|Heat shock protein DnaJ, cysteine-rich domain GO:0005524|GO:0006457|GO:0009408|GO:0031072|GO:0051082 G3DSA:1.10.287.110|G3DSA:2.10.230.10|G3DSA:2.60.260.20|MF_01152|PF00226|PF00684|PF01556|PR00625|PS00636|SM00271|SSF46565|SSF49493|SSF57938|TIGR02349 RSDT_RS01175 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001757|IPR006121|IPR008250|IPR017969|IPR018303|IPR023214|IPR023298|IPR023299|IPR027256 HAD-like domain|Heavy metal-associated domain, HMA|Heavy-metal-associated, conserved site|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829|GO:0030001|GO:0046872 G3DSA:1.20.1110.10|G3DSA:3.30.70.100|G3DSA:3.40.1110.10|G3DSA:3.40.50.1000|PF00122|PF00403|PF00702|PR00119|PR00943|PS00154|PS01047|SSF55008|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01525 RSDT_RS01190 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002474|IPR006274|IPR017926|IPR029062 Carbamoyl-phosphate synthase small subunit, N-terminal domain|Carbamoyl-phosphate synthase, small subunit|Class I glutamine amidotransferase-like|Glutamine amidotransferase GO:0004088|GO:0006207|GO:0006541 G3DSA:3.40.50.880|G3DSA:3.50.30.20|MF_01209|PF00117|PF00988|PR00096|PR00097|PR00099|SM01097|SSF52021|SSF52317|TIGR01368 RSDT_RS01195 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005479|IPR005480|IPR005483|IPR006275|IPR011607|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|Carbamoyl-phosphate synthase large subunit, CPSase domain|Carbamoyl-phosphate synthase, large subunit|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carbamoyl-phosphate synthetase, large subunit oligomerisation domain|Methylglyoxal synthase-like domain|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0006807 G3DSA:1.10.1030.10|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.1380|G3DSA:3.40.50.20|MF_01210_A|MF_01210_B|PF02142|PF02786|PF02787|PR00098|PS00867|SM00851|SM01096|SSF48108|SSF52335|SSF52440|SSF56059|TIGR01369 RSDT_RS01205 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006439|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain GO:0008152|GO:0016787 G3DSA:3.40.50.1000|PF13419|SSF56784|TIGR01549 RSDT_RS01210 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003425 CCB3/YggT GO:0016020 PF02325 RSDT_RS01215 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007420 Protein of unknown function DUF465 PF04325 RSDT_RS01220 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000399|IPR011766|IPR012000|IPR012001|IPR012846|IPR029035|IPR029061 Acetolactate synthase, large subunit, biosynthetic|DHS-like NAD/FAD-binding domain|TPP-binding enzyme, conserved site|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain|Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0003824|GO:0003984|GO:0009082|GO:0030976|GO:0050660 G3DSA:3.40.50.1220|G3DSA:3.40.50.970|PF00205|PF02775|PF02776|PS00187|SSF52467|SSF52518|TIGR00118 RSDT_RS01225 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004789|IPR019455 Acetolactate synthase, small subunit|Acetolactate synthase, small subunit, C-terminal GO:0003984|GO:0009082 G3DSA:3.30.70.1150|G3DSA:3.30.70.260|PD002844|PF10369|PF13710|SSF55021|TIGR00119 RSDT_RS01230 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000506|IPR008927|IPR013023|IPR013116|IPR013328|IPR014359|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Acetohydroxy acid isomeroreductase C-terminal|Acetohydroxy acid isomeroreductase, NADPH-binding domain|Ketol-acid reductoisomerase|Ketol-acid reductoisomerase, prokaryotic|NAD(P)-binding domain GO:0004455|GO:0009082|GO:0016491|GO:0050661|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.90.180.10|MF_00435|PF01450|PF07991|PIRSF000116|SSF48179|SSF51735|TIGR00465 RSDT_RS01235 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000850|IPR027417|IPR033690 Adenylate kinase, conserved site|Adenylate kinase/UMP-CMP kinase|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006139|GO:0019205 G3DSA:3.40.50.300|MF_00235|PF00406|PR00094|PS00113|SSF52540 RSDT_RS01240 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|SM00869|SSF103515 RSDT_RS01245 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007160 Domain of unknown function DUF362 PF04015 RSDT_RS01250 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF00037|PF12801|PF12838|PS00198|SSF54862 RSDT_RS01260 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001626|IPR029022|IPR035568 ABC transporter, BtuC-like|ABC transporter, FecCD/TroCD-like|ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 G3DSA:1.10.3470.10|PF00950|SSF81345 RSDT_RS01265 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS01270 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 G3DSA:3.40.50.1980|PF01297|SSF53807 RSDT_RS01275 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006070|IPR017945 DHBP synthase RibB-like alpha/beta domain|YrdC-like domain GO:0003725 G3DSA:3.90.870.10|PF01300|SSF55821 RSDT_RS01285 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003682|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 G3DSA:3.40.50.150|MF_00074|PF02527|SSF53335 RSDT_RS01290 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR014043|IPR016035|IPR016036|IPR020801|IPR024925 Acyl transferase|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl CoA-acyl carrier protein transacylase|Malonyl-CoA ACP transacylase, ACP-binding|Polyketide synthase, acyl transferase domain GO:0003824|GO:0008152 G3DSA:3.40.366.10|PF00698|PIRSF000446|SM00827|SSF52151|SSF55048 RSDT_RS01295 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001278|IPR001412|IPR005148|IPR008909|IPR009080|IPR014729|IPR035684 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Arginine-tRNA ligase|Arginyl tRNA synthetase N-terminal domain|Arginyl-tRNA synthetase, catalytic core domain|DALR anticodon binding|Rossmann-like alpha/beta/alpha sandwich fold GO:0000166|GO:0004812|GO:0004814|GO:0005524|GO:0005737|GO:0006418|GO:0006420 G3DSA:1.10.730.10|G3DSA:3.30.1360.70|G3DSA:3.40.50.620|MF_00123|PF00750|PF03485|PF05746|PR01038|PS00178|SM00836|SM01016|SSF47323|SSF52374|SSF55190|TIGR00456 RSDT_RS01300 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 RSDT_RS01305 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003453|IPR030802 ABC transport permease subunit MlaE, Proteobacteria|ABC transporter permease MalE GO:0006810|GO:0043190 PF02405|TIGR00056 RSDT_RS01310 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS01315 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003399|IPR030970 Mce/MlaD|Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 PF02470|TIGR04430 RSDT_RS01320 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC G3DSA:1.10.10.640|G3DSA:3.10.450.50|PF05494|PIRSF004649 RSDT_RS01325 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007428 MlaA lipoprotein GO:0016020 PF04333|PR01805 RSDT_RS01330 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR013563|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|Oligopeptide/dipeptide ABC transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0005524|GO:0015833|GO:0016887 G3DSA:3.40.50.300|PF00005|PF08352|PS00211|SM00382|SSF52540|TIGR01727 RSDT_RS01335 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001498|IPR015269|IPR020568|IPR020569|IPR035647 EF-G domain III/V-like|Impact, N-terminal|Ribosomal protein S5 domain 2-type fold|Uncharacterised domain UPF0029, Impact, C-terminal|Uncharacterised protein family UPF0029, Impact, conserved site G3DSA:3.30.230.30|G3DSA:3.30.70.240|PF01205|PF09186|PS00910|SSF54211|SSF54980 RSDT_RS01350 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000754|IPR014721|IPR020568|IPR020574|IPR023035 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S9|Ribosomal protein S9, bacterial/plastid|Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.230.10|MF_00532_B|PF00380|PS00360|SSF54211 RSDT_RS01355 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005822|IPR005823|IPR023563 Ribosomal protein L13|Ribosomal protein L13, bacterial-type|Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 G3DSA:3.90.1180.10|MF_01366|PF00572|PIRSF002181|PS00783|SSF52161|TIGR01066 RSDT_RS01360 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000846|IPR016040|IPR022663|IPR022664|IPR023940 Dihydrodipicolinate reductase|Dihydrodipicolinate reductase, C-terminal|Dihydrodipicolinate reductase, N-terminal|Dihydrodipicolinate reductase, conserved site|NAD(P)-binding domain GO:0008839|GO:0009089|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00102|PF01113|PF05173|PIRSF000161|PS01298|SSF51735|SSF55347|TIGR00036 RSDT_RS01365 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001357|IPR001679|IPR003583|IPR004149|IPR004150|IPR010994|IPR012340|IPR013839|IPR013840 BRCT domain|Helix-hairpin-helix DNA-binding motif, class 1|NAD-dependent DNA ligase|NAD-dependent DNA ligase, N-terminal|NAD-dependent DNA ligase, OB-fold|NAD-dependent DNA ligase, adenylation|Nucleic acid-binding, OB-fold|RuvA domain 2-like|Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003677|GO:0003911|GO:0006260|GO:0006281 G3DSA:1.10.150.20|G3DSA:1.10.287.610|G3DSA:2.40.50.140|G3DSA:3.30.470.30|G3DSA:3.40.50.10190|MF_01588|PF01653|PF03119|PF03120|PF12826|PF14520|PIRSF001604|SM00278|SM00292|SM00532|SSF47781|SSF50249|SSF52113|SSF56091|TIGR00575 RSDT_RS01370 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003721|IPR014729 Pantoate-beta-alanine ligase|Rossmann-like alpha/beta/alpha sandwich fold GO:0004592|GO:0015940 G3DSA:3.30.1300.10|G3DSA:3.40.50.620|MF_00158|PF02569|SSF52374|TIGR00018 RSDT_RS01375 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002133|IPR022628|IPR022629|IPR022630|IPR022631|IPR022636 S-adenosylmethionine synthetase|S-adenosylmethionine synthetase superfamily|S-adenosylmethionine synthetase, C-terminal|S-adenosylmethionine synthetase, N-terminal|S-adenosylmethionine synthetase, central domain|S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0005524|GO:0006556 G3DSA:3.30.300.10|MF_00086|PF00438|PF02772|PF02773|PIRSF000497|PS00376|PS00377|SSF55973|TIGR01034 RSDT_RS01380 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000453|IPR020541 Chorismate synthase|Chorismate synthase, conserved site GO:0004107|GO:0009073 G3DSA:3.60.150.10|MF_00300|PF01264|PIRSF001456|PS00787|PS00788|SSF103263|TIGR00033 RSDT_RS01385 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003593|IPR006345|IPR010994|IPR027417|IPR027785|IPR029493 AAA+ ATPase domain|DNA helicase, RecD-like|P-loop containing nucleoside triphosphate hydrolase|RecD helicase-like helix-hairpin-helix domain|RuvA domain 2-like|UvrD-like helicase C-terminal domain GO:0003677|GO:0032508|GO:0043141 G3DSA:1.10.150.20|G3DSA:3.40.50.300|MF_01488|PF13538|PF13604|PF14490|PF14520|SM00382|SSF47781|SSF52540|TIGR01448 RSDT_RS01400 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001537|IPR013123|IPR029026|IPR029028|IPR029064 50S ribosomal protein L30e-like|Alpha/beta knot methyltransferases|RNA 2-O ribose methyltransferase, substrate binding|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173 G3DSA:3.30.1330.30|G3DSA:3.40.1280.10|PF00588|PF08032|SM00967|SSF55315|SSF75217 RSDT_RS01405 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR027613 Surface carbohydrate biosynthesis protein, LIC13510 family TIGR04326 RSDT_RS01410 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004559|IPR006638|IPR007197|IPR010723|IPR013785 Aldolase-type TIM barrel|Coproporphyrinogen III oxidase, oxygen-independent related|Elongator protein 3/MiaB/NifB|HemN, C-terminal|Radical SAM GO:0003824|GO:0004109|GO:0005737|GO:0006779|GO:0051536|GO:0055114 G3DSA:3.20.20.70|PF04055|PF06969|SM00729|SSF102114|TIGR00539 RSDT_RS01420 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000454|IPR002379|IPR005953|IPR020537 ATP synthase, F0 complex, subunit C|ATP synthase, F0 complex, subunit C, DCCD-binding site|ATP synthase, F0 complex, subunit C, bacterial/chloroplast|V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015986|GO:0015991|GO:0033177|GO:0045263 G3DSA:1.20.20.10|MF_01396|PF00137|PR00124|PS00605|SSF81333|TIGR01260 RSDT_RS01425 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000568|IPR023011 ATP synthase, F0 complex, subunit A|ATP synthase, F0 complex, subunit A, active site GO:0015078|GO:0015986|GO:0045263 G3DSA:1.20.120.220|MF_01393|PF00119|PR00123|PS00449|SSF81336|TIGR01131 RSDT_RS01435 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter PF09527 RSDT_RS01445 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|SSF54862 RSDT_RS01450 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000688|IPR020538 Hydrogenase nickel incorporation protein HypA/HybF|Hydrogenase nickel incorporation protein HypA/HybF, conserved site GO:0006464|GO:0016151 G3DSA:2.20.28.10|MF_00213|PF01155|PIRSF004761|PS01249 RSDT_RS01455 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001135|IPR001501|IPR029014 NADH-quinone oxidoreductase, subunit D|NiFe hydrogenase-like|Nickel-dependent hydrogenase, large subunit GO:0016151|GO:0016651|GO:0048038|GO:0051287|GO:0055114 G3DSA:1.10.645.10|PF00346|PF00374|SSF56762 RSDT_RS01460 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 PD001581|PF00329|SSF143243 RSDT_RS01470 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 G3DSA:3.40.50.700|PF01058|SSF56770 RSDT_RS01475 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001694|IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site|NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PF00146|PS00668 RSDT_RS01480 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001516|IPR001750 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal|NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit PF00361|PF00662|PR01434 RSDT_RS01490 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001433|IPR012165|IPR017938|IPR019480 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Oxidoreductase FAD/NAD(P)-binding|Riboflavin synthase-like beta-barrel GO:0006221|GO:0016491|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF10418|PIRSF006816|SSF52343|SSF63380 RSDT_RS01495 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006004|IPR009051|IPR023753|IPR028261 Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase (NADPH), homotetrameric GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PF14691|PR00419|SSF46548|SSF51971|TIGR01316 RSDT_RS01505 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011576|IPR012349 FMN-binding split barrel|Pyridoxamine 5'-phosphate oxidase, putative GO:0048037 G3DSA:2.30.110.10|PF01243|SSF50475 RSDT_RS01515 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006139|IPR006140|IPR016040|IPR029752|IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site|D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1|D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain|NAD(P)-binding domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF00389|PF02826|PS00065|PS00671|SSF51735|SSF52283 RSDT_RS01525 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000223|IPR015927|IPR019757|IPR019758 Peptidase S24/S26A/S26B/S26C|Peptidase S26A, signal peptidase I|Peptidase S26A, signal peptidase I, conserved site|Peptidase S26A, signal peptidase I, lysine active site GO:0006508|GO:0008236|GO:0016020|GO:0016021 G3DSA:2.10.109.10|PF00717|PR00727|PS00760|PS00761|SSF51306|TIGR02227 RSDT_RS01535 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001451|IPR005881|IPR011004 Hexapeptide repeat|Serine O-acetyltransferase|Trimeric LpxA-like GO:0005737|GO:0006535|GO:0009001 G3DSA:1.10.3130.10|G3DSA:2.160.10.10|PF00132|PIRSF000441|SSF51161 RSDT_RS01540 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000534|IPR000706|IPR012280|IPR016040 N-acetyl-gamma-glutamyl-phosphate reductase, type 1|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0006526|GO:0008652|GO:0016620|GO:0046983|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_00150|PF01118|PF02774|SM00859|SSF51735|SSF55347|TIGR01850 RSDT_RS01545 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR014995 Protein of unknown function DUF1844 PF08899 RSDT_RS01550 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR020578|IPR024169 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2|Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF000524|PS00595|SSF53383 RSDT_RS01555 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003953|IPR005288|IPR015939|IPR023753|IPR027477 FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|L-aspartate oxidase|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0005737|GO:0008734|GO:0009435|GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|PF00890|PR00368|SSF46977|SSF51905|SSF56425|TIGR00551 RSDT_RS01560 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002638|IPR004393|IPR013785|IPR022412|IPR027277 Aldolase-type TIM barrel|Nicotinate-nucleotide pyrophosphorylase|Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD|Quinolinate phosphoribosyl transferase, C-terminal|Quinolinate phosphoribosyl transferase, N-terminal GO:0003824|GO:0004514|GO:0009435|GO:0016763|GO:0019363 G3DSA:3.20.20.70|G3DSA:3.90.1170.20|PF01729|PF02749|PIRSF006250|SSF51690|SSF54675|TIGR00078 RSDT_RS01565 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000644|IPR006667|IPR006668|IPR006669 CBS domain|Magnesium transporter MgtE|Magnesium transporter, MgtE intracellular domain|SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324|GO:0015095|GO:0015693|GO:0016020 G3DSA:1.10.357.20|G3DSA:1.25.60.10|G3DSA:3.10.580.10|PF00571|PF01769|PF03448|SM00116|SM00924|SSF158791|SSF161093|SSF54631|TIGR00400 RSDT_RS01575 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003382|IPR005252|IPR007085 Coenzyme A biosynthesis bifunctional protein CoaBC|DNA/pantothenate metabolism flavoprotein, C-terminal|Flavoprotein GO:0003824|GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 G3DSA:3.40.50.10300|G3DSA:3.40.50.1950|PF02441|PF04127|SSF102645|SSF52507|TIGR00521 RSDT_RS01585 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR035108 LarC/UPF0272 G3DSA:3.30.70.1380|PF01969 RSDT_RS01590 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR012893 HipA-like, C-terminal PF07804 RSDT_RS01595 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|SSF47413 RSDT_RS01600 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 RSDT_RS01605 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001041|IPR012675|IPR027980 2Fe-2S ferredoxin-type iron-sulfur binding domain|Beta-grasp domain|Protein of unknown function DUF4445 GO:0009055|GO:0051536 G3DSA:3.10.20.30|G3DSA:3.30.420.40|PF14574|SSF54292 RSDT_RS01610 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR015324 Ribosomal protein Rsm22-like GO:0006412|GO:0008168 PF09243 RSDT_RS01615 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000788|IPR008926|IPR013344|IPR013509 Ribonucleotide reductase R1 subunit, N-terminal|Ribonucleotide reductase large subunit, C-terminal|Ribonucleotide reductase large subunit, N-terminal|Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0005524|GO:0006260|GO:0031419|GO:0055114 G3DSA:3.20.70.20|PF00317|PF02867|PR01183|SSF48168|SSF51998|TIGR02504 RSDT_RS01625 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004268 Peptidoglycan biosynthesis protein MurJ PF03023|PR01806 RSDT_RS01630 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006214 Bax inhibitor 1-related PF01027 RSDT_RS01635 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR014729 Rossmann-like alpha/beta/alpha sandwich fold G3DSA:3.40.50.620|SSF52402 RSDT_RS01640 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004506|IPR014729|IPR023382 Adenine nucleotide alpha hydrolase-like domains|Rossmann-like alpha/beta/alpha sandwich fold|tRNA-specific 2-thiouridylase GO:0008033|GO:0016740|GO:0016783 G3DSA:2.30.30.280|G3DSA:2.40.30.10|G3DSA:3.40.50.620|MF_00144|PF03054|SSF52402|TIGR00420 RSDT_RS01645 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000594|IPR001763 Rhodanese-like domain|THIF-type NAD/FAD binding fold GO:0008641 G3DSA:3.40.250.10|G3DSA:3.40.50.720|PF00581|PF00899|SM00450|SSF69572 RSDT_RS01650 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001216|IPR001926|IPR005856|IPR005859 Cysteine synthase|Cysteine synthase CysK|Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0004124|GO:0006535 G3DSA:3.40.50.1100|PF00291|PS00901|SSF53686|TIGR01136|TIGR01139 RSDT_RS01655 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000944|IPR011991 Transcription regulator Rrf2-type|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF02082|SSF46785|TIGR00738 RSDT_RS01675 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002052|IPR004556|IPR007848|IPR019874|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|Methyltransferase small domain|Modification methylase HemK|Protein-(glutamine-N5) methyltransferase, release factor-specific|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0006479|GO:0008168|GO:0008276|GO:0032259 G3DSA:1.10.8.10|G3DSA:3.40.50.150|MF_02126|PF05175|PS00092|SSF53335|TIGR00536|TIGR03534 RSDT_RS01685 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007403 Protein of unknown function DUF456 PF04306 RSDT_RS01690 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013408 CRISPR-associated protein Csm1 G3DSA:1.10.3210.10|TIGR02578 RSDT_RS01695 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011335|IPR015093 Protein of unknown function DUF1887|Restriction endonuclease type II-like G3DSA:1.10.10.680|G3DSA:3.40.1350.10|PF09002|SSF52980 RSDT_RS01700 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011335|IPR015093 Protein of unknown function DUF1887|Restriction endonuclease type II-like G3DSA:3.40.50.10770|PF09002|SSF52980 RSDT_RS01705 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013443 Putative CRISPR-associated protein, VVA1548 family PF09652|TIGR02620 RSDT_RS01710 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001737|IPR011530|IPR020596|IPR020598|IPR023165|IPR029063 Ribosomal RNA adenine dimethylase|Ribosomal RNA adenine methylase transferase, N-terminal|Ribosomal RNA adenine methylase transferase, conserved site|Ribosomal RNA adenine methyltransferase KsgA/Erm|S-adenosyl-L-methionine-dependent methyltransferase|rRNA adenine dimethylase-like GO:0000154|GO:0000179|GO:0006364|GO:0008649 G3DSA:1.10.8.100|G3DSA:3.40.50.150|MF_00607|PF00398|PS01131|SM00650|SSF53335|TIGR00755 RSDT_RS01715 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000640|IPR005517|IPR014721|IPR020568|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Translation elongation factor EFG/EF2, domain IV GO:0005525 G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|PF00679|PF03764|PF14492|SM00838|SM00889|SSF54211|SSF54980 RSDT_RS01725 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002695|IPR011607 AICARFT/IMPCHase bienzyme|Methylglyoxal synthase-like domain GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.50.1380|PF01808|PF02142|SM00851|SSF52335 RSDT_RS01730 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003018|IPR029016 GAF domain|GAF domain-like GO:0005515 G3DSA:3.30.450.40|PF13185|SM00065|SSF55781 RSDT_RS01735 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004753 Cell shape determining protein MreB GO:0000902 G3DSA:3.30.420.40|G3DSA:3.90.640.10|PF06723|PR01652|SSF53067|TIGR00904 RSDT_RS01740 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR015797 NUDIX hydrolase domain-like GO:0016787 G3DSA:3.90.79.10|SSF55811 RSDT_RS01745 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000182|IPR006464|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain|N-acetyltransferase RimI/Ard1 GO:0006474|GO:0008080|GO:0016407 G3DSA:3.40.630.30|PF00583|SSF55729|TIGR01575 RSDT_RS01750 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000652|IPR013785|IPR020861|IPR022896 Aldolase-type TIM barrel|Triosephosphate isomerase|Triosephosphate isomerase, active site|Triosephosphate isomerase, bacterial/eukaryotic GO:0003824|GO:0004807|GO:0006096|GO:0008152 G3DSA:3.20.20.70|MF_00147_B|PF00121|PS00171|SSF51351|TIGR00419 RSDT_RS01755 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PF03840|PR01651|TIGR00810 RSDT_RS01760 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002625 Smr domain PF01713|SM00463|SSF160443 RSDT_RS01765 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain PF09350 RSDT_RS01770 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000432|IPR005748|IPR007695|IPR007696|IPR007860|IPR007861|IPR016151|IPR017261|IPR027417 DNA mismatch repair protein MutS|DNA mismatch repair protein MutS, C-terminal|DNA mismatch repair protein MutS, N-terminal|DNA mismatch repair protein MutS, clamp|DNA mismatch repair protein MutS, connector domain|DNA mismatch repair protein MutS, core|DNA mismatch repair protein MutS-like, N-terminal|DNA mismatch repair protein MutS/MSH|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006298|GO:0030983 G3DSA:1.10.1420.10|G3DSA:3.30.420.110|G3DSA:3.40.1170.10|G3DSA:3.40.50.300|MF_00096|PF00488|PF01624|PF05188|PF05190|PF05192|PIRSF037677|PS00486|SM00533|SM00534|SSF48334|SSF52540|SSF53150|SSF55271|TIGR01070 RSDT_RS01775 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 PF06305 RSDT_RS01780 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001310|IPR011146 HIT-like domain|Histidine triad (HIT) protein GO:0003824 G3DSA:3.30.428.10|PF01230|SSF54197 RSDT_RS01785 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007337 RelB antitoxin/Antitoxin DinJ PF04221|TIGR02384 RSDT_RS01800 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006143|IPR032317 RND efflux pump, membrane fusion protein|RND efflux pump, membrane fusion protein, barrel-sandwich domain GO:0005215|GO:0016020|GO:0055085 G3DSA:1.10.287.470|G3DSA:2.40.50.100|PF16576|SSF111369|TIGR01730 RSDT_RS01805 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001036|IPR004764|IPR027463 Acriflavin resistance protein|Hydrophobe/amphiphile efflux-1 HAE1|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020|GO:0016021 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1320|G3DSA:3.30.70.1430|G3DSA:3.30.70.1440|PF00873|PR00702|SSF82693|SSF82714|SSF82866|TIGR00915 RSDT_RS01810 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003423|IPR010131 Outer membrane efflux protein|RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 G3DSA:1.20.1600.10|PF02321|SSF56954|TIGR01845 RSDT_RS01820 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000722|IPR006592|IPR007066|IPR007080|IPR007081|IPR007083|IPR012754 DNA-directed RNA polymerase, subunit beta-prime|RNA polymerase Rpb1, domain 1|RNA polymerase Rpb1, domain 3|RNA polymerase Rpb1, domain 4|RNA polymerase Rpb1, domain 5|RNA polymerase, N-terminal|RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.40.20|G3DSA:2.40.50.100|MF_01322|PF00623|PF04983|PF04997|PF04998|PF05000|SM00663|SSF64484|TIGR02386 RSDT_RS01825 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007120|IPR007121|IPR007641|IPR007642|IPR007644|IPR007645|IPR010243|IPR014724|IPR019462 DNA-directed RNA polymerase beta subunit, bacterial-type|DNA-directed RNA polymerase, beta subunit, external 1 domain|DNA-directed RNA polymerase, subunit 2, domain 6|RNA polymerase Rpb2, OB-fold|RNA polymerase Rpb2, domain 2|RNA polymerase Rpb2, domain 3|RNA polymerase Rpb2, domain 7|RNA polymerase, beta subunit, conserved site|RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 G3DSA:2.40.270.10|G3DSA:2.40.50.100|G3DSA:2.40.50.150|G3DSA:3.90.1100.10|G3DSA:3.90.1110.10|G3DSA:3.90.1800.10|MF_01321|PF00562|PF04560|PF04561|PF04563|PF04565|PF10385|PS01166|SSF64484|TIGR02013 RSDT_RS01830 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000206|IPR008932|IPR013823|IPR014719 Ribosomal protein L7/L12|Ribosomal protein L7/L12, C-terminal|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like|Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.710|G3DSA:3.30.1390.10|MF_00368|PD001326|PF00542|PF16320|SSF48300|SSF54736|TIGR00855 RSDT_RS01835 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001790|IPR002363|IPR022973 Ribosomal protein L10|Ribosomal protein L10, eubacterial, conserved site|Ribosomal protein L10P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0042254 MF_00362|PF00466|PS01109|SSF160369 RSDT_RS01840 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002143|IPR005878|IPR023674|IPR028364 Ribosomal protein L1|Ribosomal protein L1, bacterial-type|Ribosomal protein L1-like|Ribosomal protein L1/ribosomal biogenesis protein GO:0003723|GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.190.20|MF_01318_B|PF00687|PIRSF002155|SSF56808|TIGR01169 RSDT_RS01845 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000911|IPR006519|IPR020783|IPR020784 Ribosomal protein L11, C-terminal|Ribosomal protein L11, N-terminal|Ribosomal protein L11, bacterial-type|Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 G3DSA:1.10.10.250|G3DSA:3.30.1550.10|MF_00736|PD001367|PF00298|PF03946|SM00649|SSF46906|SSF54747|TIGR01632 RSDT_RS01850 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001062|IPR005824|IPR006645|IPR008991|IPR014722|IPR015869 KOW|NusG, N-terminal|Ribosomal protein L2 domain 2|Transcription antitermination protein, NusG|Transcription antitermination protein, NusG, bacteria, conserved site|Translation protein SH3-like domain GO:0006355|GO:0032784 G3DSA:2.30.30.30|G3DSA:3.30.70.940|MF_00948|PF00467|PF02357|PR00338|PS01014|SM00738|SM00739|SSF50104|SSF82679|TIGR00922 RSDT_RS01855 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001901|IPR005807|IPR022943 Preprotein translocase subunit SecE|Protein translocase complex, SecE/Sec61-gamma subunit|SecE subunit of protein translocation complex GO:0006605|GO:0006886|GO:0009306|GO:0015450|GO:0016020|GO:0016021 G3DSA:1.20.5.1030|MF_00422|PF00584|PS01067|TIGR00964 RSDT_RS01865 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001705|IPR011332|IPR018264 Ribosomal protein L33|Ribosomal protein L33, conserved site|Zinc-binding ribosomal protein GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00294|PF00471|PS00582|SSF57829|TIGR01023 RSDT_RS01870 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000795|IPR004160|IPR004161|IPR004541|IPR005225|IPR009000|IPR009001|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Transcription factor, GTP-binding domain|Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal|Translation elongation factor EFTu-like, domain 2|Translation elongation factor EFTu/EF1A, C-terminal|Translation elongation factor EFTu/EF1A, bacterial/organelle|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.40.50.300|MF_00118_B|PF00009|PF03143|PF03144|PR00315|SSF50447|SSF50465|SSF52540|TIGR00231|TIGR00485 RSDT_RS01885 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000064 Endopeptidase, NLPC/P60 domain G3DSA:3.90.1720.10|PF00877|SSF54001 RSDT_RS01890 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010930 Flagellar basal-body/hook protein, C-terminal domain PF06429 RSDT_RS01895 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003801|IPR022838 GTP cyclohydrolase FolE2|GTP cyclohydrolase FolE2/MptA GO:0003933|GO:0003934|GO:0035998 G3DSA:3.10.270.10|MF_01527_B|PF02649 RSDT_RS01900 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002145|IPR010985|IPR013321|IPR014864|IPR022988 Arc-type ribbon-helix-helix|Nickel-responsive transcriptional regulator NikR|Ribbon-helix-helix|Ribbon-helix-helix protein, CopG|Transcription factor, NikR, nickel binding C-terminal GO:0003677|GO:0006355|GO:0010045|GO:0016151 G3DSA:1.10.1220.10|G3DSA:3.30.70.1150|MF_00476|PF01402|PF08753|SSF47598|SSF55021 RSDT_RS01905 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PF02674 RSDT_RS01910 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004518|IPR011551 NTP pyrophosphohydrolase MazG|NTP pyrophosphohydrolase MazG, putative catalytic core G3DSA:1.10.287.1080|PF03819|SSF101386|TIGR00444 RSDT_RS01915 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017853 Glycoside hydrolase superfamily G3DSA:2.60.40.1180|G3DSA:3.20.20.80|SSF51445 RSDT_RS01930 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000873|IPR028154 AMP-dependent ligase, C-terminal|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:3.40.50.980|PF00501|PF14535|SSF56801 RSDT_RS01935 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001347|IPR005855|IPR029055 Glucosamine-fructose-6-phosphate aminotransferase, isomerising|Nucleophile aminohydrolases, N-terminal|Sugar isomerase (SIS) GO:0004360|GO:0097367|GO:1901135|GO:1901137 G3DSA:3.40.50.10490|G3DSA:3.60.20.10|MF_00164|PF01380|PF13522|SSF53697|SSF56235|TIGR01135 RSDT_RS01940 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR027304 Trigger factor/SurA domain G3DSA:1.10.4030.10|G3DSA:3.10.50.40|PF13624|SSF109998 RSDT_RS01945 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000194|IPR003593|IPR004665|IPR011112|IPR011113|IPR011129|IPR012340|IPR027417 AAA+ ATPase domain|ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain|Cold shock domain|Nucleic acid-binding, OB-fold|P-loop containing nucleoside triphosphate hydrolase|Rho termination factor, N-terminal|Rho termination factor, RNA-binding domain|Transcription termination factor Rho GO:0003676|GO:0003723|GO:0005524|GO:0006353|GO:0008186 G3DSA:1.10.720.10|G3DSA:2.40.50.140|G3DSA:3.40.50.300|MF_01884|PF00006|PF07497|PF07498|SM00357|SM00382|SM00959|SSF50249|SSF52540|SSF68912|TIGR00767 RSDT_RS01950 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003711 CarD-like/TRCF domain PF02559|SM01058|SSF141259 RSDT_RS01955 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001328|IPR018171 Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase, conserved site GO:0004045 G3DSA:3.40.50.1470|MF_00083|PF01195|PS01196|SSF53178|TIGR00447 RSDT_RS01960 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000073|IPR029058 Alpha/Beta hydrolase fold|Alpha/beta hydrolase fold-1 G3DSA:3.40.50.1820|PF12697|SSF53474 RSDT_RS01965 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001021|IPR011035|IPR020056|IPR020057|IPR029751 Ribosomal protein L25|Ribosomal protein L25, beta domain|Ribosomal protein L25, long-form|Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain|Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain GO:0003735|GO:0005840|GO:0006412|GO:0008097 G3DSA:2.170.120.20|G3DSA:2.40.240.10|MF_01334|PD012503|PF01386|PF14693|SSF50715|TIGR00731 RSDT_RS01970 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000842|IPR005946|IPR029057|IPR029099 Phosphoribosyl pyrophosphate synthetase, conserved site|Phosphoribosyltransferase-like|Ribose-phosphate diphosphokinase|Ribose-phosphate pyrophosphokinase, N-terminal domain GO:0000287|GO:0004749|GO:0009156|GO:0009165|GO:0044249 G3DSA:3.40.50.2020|MF_00583_B|PF13793|PF14572|PS00114|SM01400|SSF53271|TIGR01251 RSDT_RS01980 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004424|IPR006204|IPR013750|IPR014721|IPR020568 4-diphosphocytidyl-2C-methyl-D-erythritol kinase|GHMP kinase N-terminal domain|GHMP kinase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0016114|GO:0050515 G3DSA:3.30.230.10|G3DSA:3.30.70.890|MF_00061|PF00288|PF08544|PIRSF010376|SSF54211|SSF55060|TIGR00154 RSDT_RS01985 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001353|IPR022281|IPR029055 ATP-dependent protease, HslV subunit|Nucleophile aminohydrolases, N-terminal|Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0006508|GO:0009376|GO:0051603 G3DSA:3.60.20.10|MF_00248|PF00227|PIRSF039093|SSF56235|TIGR03692 RSDT_RS01990 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001915|IPR011990|IPR019734 Peptidase M48|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0004222|GO:0005515|GO:0006508 G3DSA:1.25.40.10|G3DSA:3.30.2010.10|PF01435|PF13432|SM00028|SSF48452 RSDT_RS01995 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009080|IPR014729|IPR015273|IPR015803|IPR024909|IPR032678 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Cysteine-tRNA ligase|Cysteinyl-tRNA synthetase, class Ia, DALR|Cysteinyl-tRNA synthetase/mycothiol ligase|Rossmann-like alpha/beta/alpha sandwich fold|tRNA synthetases class I, catalytic domain GO:0000166|GO:0004812|GO:0004817|GO:0005524|GO:0005737|GO:0006418|GO:0006423 G3DSA:1.20.120.640|G3DSA:3.40.50.620|MF_00041|PF01406|PF09190|PR00983|SM00840|SSF47323|SSF52374|TIGR00435 RSDT_RS02000 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003500|IPR004785 Ribose 5-phosphate isomerase B|Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0004751|GO:0005975|GO:0006098|GO:0016853 G3DSA:3.40.1400.10|PF02502|PIRSF005384|SSF89623|TIGR00689|TIGR01120 RSDT_RS02005 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:2.50.20.10 RSDT_RS02010 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13432|SM00028|SSF48452 RSDT_RS02015 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000943|IPR007627|IPR007630|IPR009042|IPR011991|IPR013324|IPR013325|IPR014284 RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|PF00140|PF04542|PF04545|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02937 RSDT_RS02020 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000489|IPR003726|IPR003759|IPR006158|IPR011005|IPR017215 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial|Cobalamin (vitamin B12)-binding domain|Cobalamin (vitamin B12)-binding module, cap domain|Dihydropteroate synthase-like|Homocysteine-binding domain|Pterin-binding domain GO:0031419|GO:0042558|GO:0044237|GO:0046872 G3DSA:1.10.1240.10|G3DSA:3.20.20.20|G3DSA:3.20.20.330|G3DSA:3.40.50.280|PF00809|PF02310|PF02574|PF02607|PIRSF037472|SM01018|SSF47644|SSF51717|SSF52242|SSF82282 RSDT_RS02025 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000182|IPR016181 Acyl-CoA N-acyltransferase|GNAT domain GO:0008080 G3DSA:3.40.630.30|PF00583|SSF55729 RSDT_RS02035 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011723|IPR021834 Protein of unknown function DUF3426|Zinc finger/thioredoxin putative PF11906|PF13717|TIGR02098 RSDT_RS02040 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004564|IPR018323|IPR029046 Lipoprotein localisation LolA/LolB/LppX|Outer membrane lipoprotein carrier protein LolA, Proteobacteria|Outer membrane lipoprotein carrier protein LolA-like GO:0042597|GO:0042953|GO:0042954 G3DSA:2.50.20.10|PF03548|SSF89392|TIGR00547 RSDT_RS02045 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002543|IPR011991|IPR018541|IPR025199|IPR027417 DNA translocase FtsK, 4TM region|FtsK domain|FtsK gamma domain|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0000166|GO:0003677|GO:0005524 G3DSA:1.10.10.10|G3DSA:3.40.50.300|PF01580|PF09397|PF13491|SM00843|SSF46785|SSF52540 RSDT_RS02050 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001059|IPR008991|IPR011768|IPR012340|IPR013185|IPR013852|IPR014722|IPR015365|IPR020599 Elongation factor P, C-terminal|Nucleic acid-binding, OB-fold|Ribosomal protein L2 domain 2|Translation elongation factor P|Translation elongation factor P/YeiP|Translation elongation factor P/YeiP, central|Translation elongation factor P/YeiP, conserved site|Translation elongation factor, KOW-like|Translation protein SH3-like domain GO:0003746|GO:0005737|GO:0006414|GO:0043043 G3DSA:2.30.30.30|G3DSA:2.40.50.140|MF_00141|PF01132|PF08207|PF09285|PIRSF005901|PS01275|SM00841|SM01185|SSF50104|SSF50249|TIGR00038 RSDT_RS02055 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006073|IPR019987|IPR027417 GTP binding domain|GTP-binding protein, ribosome biogenesis, YsxC|P-loop containing nucleoside triphosphate hydrolase GO:0005525 G3DSA:3.40.50.300|MF_00321|PF01926|SSF52540|TIGR03598 RSDT_RS02065 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011990|IPR017689 Outer membrane protein assembly factor BamD|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|MF_00922|PF13525|SSF48452|TIGR03302 RSDT_RS02070 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000103|IPR005982|IPR008255|IPR023753 FAD/NAD(P)-binding domain|Pyridine nucleotide-disulphide oxidoreductase, class-II|Pyridine nucleotide-disulphide oxidoreductase, class-II, active site|Thioredoxin reductase GO:0004791|GO:0005737|GO:0016491|GO:0019430|GO:0055114 G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF07992|PR00368|PR00469|PS00573|SSF51905|TIGR01292 RSDT_RS02075 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005746|IPR012336|IPR013766|IPR017937 Thioredoxin|Thioredoxin domain|Thioredoxin, conserved site|Thioredoxin-like fold GO:0006662|GO:0015035|GO:0045454 G3DSA:3.40.30.10|PF00085|PIRSF000077|PR00421|PS00194|SSF52833|TIGR01068 RSDT_RS02080 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000905|IPR017861|IPR022450 Gcp-like domain|Kae1/TsaD family|tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 G3DSA:3.30.420.40|MF_01445|PF00814|PR00789|SSF53067|TIGR00329|TIGR03723 RSDT_RS02085 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000146|IPR028343|IPR033391 Fructose-1,6-bisphosphatase|Fructose-1,6-bisphosphatase class 1|Fructose-1-6-bisphosphatase class I, N-terminal GO:0005975|GO:0016791|GO:0042132 G3DSA:3.30.540.10|G3DSA:3.40.190.80|MF_01855|PF00316|PIRSF000904|PIRSF500210|PR00115|SSF56655 RSDT_RS02095 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 RSDT_RS02100 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 PF04977 RSDT_RS02110 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000462|IPR004570 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016020|GO:0016021|GO:0016780 PF01066|PIRSF000847|PS00379|TIGR00560 RSDT_RS02115 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000682|IPR029063 Protein-L-isoaspartate(D-aspartate) O-methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase GO:0004719|GO:0006464 G3DSA:3.40.50.150|MF_00090|PF01135|SSF53335|TIGR00080 RSDT_RS02120 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 RSDT_RS02125 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007029 YHS domain G3DSA:1.10.620.20|PF04945 RSDT_RS02130 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 G3DSA:3.30.70.560|PF01288|SSF55083|TIGR01498 RSDT_RS02135 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004604|IPR027417 DNA recombination/repair protein RecN|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006281|GO:0006310 G3DSA:3.40.50.300|PF13476|PIRSF003128|SSF52540 RSDT_RS02140 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 RSDT_RS02145 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 RSDT_RS02160 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000748|IPR002942|IPR006145|IPR018496|IPR020103 Pseudouridine synthase, RsuA/RluB/C/D/E/F|Pseudouridine synthase, RsuA/RluB/E/F|Pseudouridine synthase, RsuA/RluB/E/F, conserved site|Pseudouridine synthase, catalytic domain|RNA-binding S4 domain GO:0001522|GO:0003723|GO:0009451|GO:0009982|GO:0016866 G3DSA:3.10.290.10|G3DSA:3.30.2350.10|PF00849|PF01479|PS01149|SM00363|SSF55120|SSF55174|TIGR00093 RSDT_RS02165 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site GO:0000287|GO:0005975|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|SSF53738|SSF55957 RSDT_RS02170 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001478|IPR001940|IPR009003|IPR011782 PDZ domain|Peptidase S1, PA clan|Peptidase S1C|Peptidase S1C, Do GO:0004252|GO:0005515|GO:0006508 G3DSA:2.30.42.10|G3DSA:2.40.10.10|PF13180|PF13365|PR00834|SM00228|SSF50156|SSF50494|TIGR02037 RSDT_RS02175 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002104|IPR004107|IPR011010|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|SSF56349 RSDT_RS02195 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 RSDT_RS02210 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000158|IPR003008|IPR008280|IPR018316|IPR020805|IPR024757 Cell division protein FtsZ|Cell division protein FtsZ, C-terminal|Cell division protein FtsZ, conserved site|Tubulin/FtsZ, 2-layer sandwich domain|Tubulin/FtsZ, C-terminal|Tubulin/FtsZ, GTPase domain GO:0003924|GO:0005525|GO:0005737 G3DSA:3.30.1330.20|G3DSA:3.40.50.1440|MF_00909|PF00091|PF12327|PR00423|PS01134|PS01135|SM00864|SM00865|SSF52490|SSF55307|TIGR00065 RSDT_RS02215 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003494|IPR020823 Cell division protein FtsA|SHS2 domain inserted in FtsA GO:0005515|GO:0007049 G3DSA:3.30.420.40|G3DSA:3.90.640.10|MF_02033|PF02491|PF14450|PIRSF003101|SM00842|SSF53067|TIGR01174 RSDT_RS02220 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005548|IPR013685 Cell division protein FtsQ/DivIB|POTRA domain, FtsQ-type PF03799|PF08478 RSDT_RS02225 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003170|IPR006094|IPR011601|IPR016166|IPR016167|IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|UDP-N-acetylenolpyruvoylglucosamine reductase|UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0003824|GO:0008762|GO:0016491|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.30.43.10|G3DSA:3.30.465.10|G3DSA:3.90.78.10|MF_00037|PF01565|PF02873|SSF56176|SSF56194|TIGR00179 RSDT_RS02230 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000713|IPR004101|IPR005758|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramate--L-alanine ligase GO:0005524|GO:0008763|GO:0009058|GO:0009252|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00046|PF01225|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01082 RSDT_RS02235 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004276|IPR006009|IPR007235 Glycosyl transferase, family 28, C-terminal|Glycosyltransferase family 28, N-terminal domain|N-acetylglucosaminyltransferase, MurG GO:0005975|GO:0009252|GO:0016758|GO:0030259|GO:0050511 G3DSA:3.40.50.2000|MF_00033|PF03033|PF04101|SSF53756|TIGR01133 RSDT_RS02240 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001182|IPR013437 Cell division protein FtsW|Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0009252|GO:0016021|GO:0051301 PF01098|TIGR02614 RSDT_RS02245 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004101|IPR005762|IPR013221 Mur ligase, C-terminal|Mur ligase, central|UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0009058|GO:0016874|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.50.720|G3DSA:3.90.190.20|MF_00639|PF02875|PF08245|SSF51984|SSF53244|SSF53623|TIGR01087 RSDT_RS02250 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000715|IPR003524|IPR018480 Glycosyl transferase, family 4|Phospho-N-acetylmuramoyl-pentapeptide transferase|Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site GO:0008963|GO:0016020|GO:0016021 MF_00038|PF00953|PF10555|PS01347|PS01348|TIGR00445 RSDT_RS02255 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000713|IPR004101|IPR005863|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0009058|GO:0016874|GO:0047480|GO:0071555 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|PF01225|PF02875|PF08245|SSF53244|SSF53623|SSF63418|TIGR01143 RSDT_RS02260 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000713|IPR004101|IPR005761|IPR013221 Mur ligase, C-terminal|Mur ligase, N-terminal catalytic domain|Mur ligase, central|UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0009058|GO:0016874|GO:0016881|GO:0051301 G3DSA:3.40.1190.10|G3DSA:3.40.1390.10|G3DSA:3.90.190.20|MF_00208|PF01225|PF02875|PF08245|SSF53244|SSF53623|SSF63418|TIGR01085 RSDT_RS02265 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001460|IPR005311|IPR005543|IPR012338 Beta-lactamase/transpeptidase-like|PASTA domain|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|PF03793|SSF54184|SSF56519|SSF56601 RSDT_RS02275 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002903|IPR023397|IPR029063 Ribosomal RNA small subunit methyltransferase H|S-adenosyl-L-methionine-dependent methyltransferase|S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 G3DSA:1.10.150.170|G3DSA:3.40.50.150|MF_01007|PF01795|PIRSF004486|SSF53335|SSF81799|TIGR00006 RSDT_RS02280 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003444|IPR020603 MraZ domain|Transcriptional regulator MraZ GO:0003700|GO:0006355 G3DSA:2.10.260.10|MF_01008|PD006745|PF02381|SSF89447 RSDT_RS02290 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002742|IPR004462|IPR004793 Desulfoferrodoxin|Desulfoferrodoxin, ferrous iron-binding domain|Desulforodoxin domain GO:0005506|GO:0016491|GO:0019430|GO:0055114 G3DSA:2.60.40.730|PF01880|PF06397|SSF49367|SSF57802|TIGR00319|TIGR00320|TIGR00332 RSDT_RS02295 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018527|IPR024935 Rubredoxin domain|Rubredoxin, iron-binding site GO:0005506|GO:0046872 G3DSA:2.20.28.10|PF00301|PR00163|PS00202|SSF57802 RSDT_RS02305 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:1.20.5.320 RSDT_RS02310 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009051|IPR017896|IPR017900|IPR023234 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|NarG-like domain GO:0051536 G3DSA:1.10.1060.10|G3DSA:1.20.950.20|PF02665|PF13183|PS00198|SSF103501|SSF46548 RSDT_RS02315 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003813|IPR017896|IPR017900|IPR023753 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|FAD/NAD(P)-binding domain|Methyl-viologen-reducing hydrogenase, delta subunit GO:0015948|GO:0016491|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.50.50.60|PF02662|PF07992|PF13187|PR00411|PS00198|SSF51905|SSF54862 RSDT_RS02320 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.50.50.60|PF07992|PR00368|SSF51905 RSDT_RS02325 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003953|IPR011803|IPR015939|IPR023753|IPR027477 Adenylylsulphate reductase, alpha subunit|FAD-dependent oxidoreductase 2, FAD binding domain|FAD/NAD(P)-binding domain|Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal|Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain GO:0016491|GO:0055114 G3DSA:1.20.58.100|G3DSA:3.50.50.60|G3DSA:3.90.700.10|PF00890|PIRSF000171|SSF46977|SSF51905|SSF56425|TIGR02061 RSDT_RS02330 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011802|IPR017896|IPR017900|IPR022738 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Adenylylsulphate reductase, beta subunit|Adenylylsulphate reductase, beta subunit, C-terminal G3DSA:3.30.70.20|PF12139|PF13187|PS00198|SSF54862|TIGR02060 RSDT_RS02335 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001986|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824|GO:0016765 G3DSA:3.65.10.10|PF00275|SSF55205 RSDT_RS02340 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000121|IPR002192|IPR008279|IPR013815|IPR015813|IPR023151 ATP-grasp fold, subdomain 1|PEP-utilising enzyme, C-terminal|PEP-utilising enzyme, conserved site|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0005524|GO:0016301|GO:0016310|GO:0016772 G3DSA:3.20.20.60|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|PF02896|PS00742|SSF51621|SSF52009|SSF56059 RSDT_RS02345 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000089|IPR000891|IPR003379|IPR005479|IPR005481|IPR005482|IPR011053|IPR011054|IPR013785|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|Aldolase-type TIM barrel|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Biotin/lipoyl attachment|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Carboxylase, conserved domain|Pre-ATP-grasp domain|Pyruvate carboxyltransferase|Rudiment single hybrid motif|Single hybrid motif GO:0003824|GO:0005524 G3DSA:2.40.50.100|G3DSA:3.20.20.70|G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF00364|PF00682|PF02436|PF02785|PF02786|PS00867|SM00878|SSF51230|SSF51246|SSF51569|SSF52440|SSF56059|SSF89000 RSDT_RS02350 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004143|IPR004408 Biotin--acetyl-CoA-carboxylase ligase|Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0004077|GO:0006464 G3DSA:3.30.930.10|PF03099|SSF55681|TIGR00121 RSDT_RS02355 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002036|IPR023091 Endoribonuclease YbeY|Metalloprotease catalytic domain, predicted GO:0004222|GO:0006364 G3DSA:3.40.390.30|PF02130|SSF55486|TIGR00043 RSDT_RS02360 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003607|IPR006674|IPR006675|IPR011621|IPR011624 HD domain|HD/PDEase domain|HDIG domain|Metal-dependent phosphohydrolase, 7TM extracellular domain|Metal-dependent phosphohydrolase, 7TM intracellular domain G3DSA:1.10.3210.10|PF01966|PF07697|PF07698|SM00471|SSF109604|TIGR00277 RSDT_RS02380 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003111|IPR003593|IPR003959|IPR004815|IPR008268|IPR008269|IPR014721|IPR015947|IPR020568|IPR027417|IPR027543 AAA+ ATPase domain|ATPase, AAA-type, core|Lon protease, bacterial|Lon protease, bacterial/eukaryotic-type|Lon, substrate-binding domain|P-loop containing nucleoside triphosphate hydrolase|PUA-like domain|Peptidase S16, Lon proteolytic domain|Peptidase S16, active site|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 G3DSA:1.10.4060.10|G3DSA:1.10.8.60|G3DSA:2.30.130.40|G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01973|PF00004|PF02190|PF05362|PIRSF001174|PR00830|PS01046|SM00382|SM00464|SSF52540|SSF54211|SSF88697|TIGR00763 RSDT_RS02395 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005065|IPR016986|IPR029058 Alpha/Beta hydrolase fold|Platelet-activating factor acetylhydrolase-like|Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL GO:0003847|GO:0016042 G3DSA:3.40.50.1820|PF03403|PIRSF031982|SSF53474 RSDT_RS02400 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR032816 SNARE associated Golgi protein PF09335 RSDT_RS02405 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS02410 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010140|IPR016195 Histidinol phosphate phosphatase, HisJ|Polymerase/histidinol phosphatase-like GO:0000105|GO:0003824|GO:0004401 G3DSA:3.20.20.140|SSF89550|TIGR01856 RSDT_RS02415 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000836|IPR023050|IPR029057 Bifunctional protein PyrR|Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|MF_01219|PF00156|SSF53271 RSDT_RS02425 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006674 HD domain G3DSA:1.10.3210.10|PF13023|SSF109604 RSDT_RS02435 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR014017|IPR027417|IPR034739 P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00580|PF13361|SSF52540 RSDT_RS02440 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011604|IPR027417 Exonuclease, phage-type/RecB, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0004518 G3DSA:3.40.50.300|G3DSA:3.90.320.10|PF12705|SSF52540 RSDT_RS02445 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000110|IPR003029|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|Ribosomal protein S1|S1 domain GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412 G3DSA:2.40.50.140|PF00575|PIRSF002111|PR00681|SM00316|SSF50249|TIGR00717 RSDT_RS02450 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009080|IPR015944 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004812|GO:0004820|GO:0005524|GO:0005737|GO:0006418|GO:0006426 G3DSA:1.10.730.10|MF_00255|PF02092|PR01045|SSF109604|TIGR00211 RSDT_RS02455 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 G3DSA:1.20.58.180|G3DSA:3.30.930.10|MF_00254|PF02091|PR01044|SSF55681|TIGR00388 RSDT_RS02460 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003717|IPR012340|IPR022572 DNA replication/recombination mediator RecO, N-terminal|Nucleic acid-binding, OB-fold|Recombination protein O, RecO GO:0006281|GO:0006310 G3DSA:2.40.50.140|MF_00201|PF02565|PF11967|SSF50249|SSF57863 RSDT_RS02465 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010982|IPR025194 Domain of unknown function DUF4115|Lambda repressor-like, DNA-binding domain GO:0003677 G3DSA:1.10.260.40|PF13413|PF13464|SSF47413 RSDT_RS02470 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000297|IPR027304 Peptidyl-prolyl cis-trans isomerase, PpiC-type|Trigger factor/SurA domain GO:0016853 G3DSA:1.10.4030.10|G3DSA:3.10.50.40|PF13145|PF13624|SSF109998|SSF54534 RSDT_RS02475 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001650|IPR003711|IPR004576|IPR005118|IPR011545|IPR014001|IPR027417 CarD-like/TRCF domain|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Transcription-repair coupling factor|Transcription-repair-coupling factor, C-terminal domain GO:0003676|GO:0003684|GO:0005524|GO:0006281 G3DSA:3.40.50.300|MF_00969|PF00270|PF00271|PF02559|PF03461|SM00487|SM00490|SM00982|SM01058|SSF141259|SSF143517|SSF52540|TIGR00580 RSDT_RS02490 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006118|IPR006119 Recombinase, conserved site|Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 G3DSA:1.10.10.60|G3DSA:3.40.50.1390|PF00239|PS00397|SM00857|SSF53041 RSDT_RS02495 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006367|IPR016040 NAD(P)-binding domain|Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 G3DSA:3.30.160.110|G3DSA:3.40.50.720|PF13241|SSF51735|SSF75615|TIGR01470 RSDT_RS02500 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PF01578 RSDT_RS02505 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000343|IPR006151|IPR015895|IPR015896|IPR016040|IPR018214 Glutamyl-tRNA reductase, conserved site|NAD(P)-binding domain|Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal|Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 G3DSA:1.10.1200.70|G3DSA:3.40.50.720|MF_00087|PF00745|PF01488|PF05201|PIRSF000445|PS00747|SSF51735|SSF69075|SSF69742|TIGR01035 RSDT_RS02510 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011063|IPR012094|IPR012795|IPR014729 Rossmann-like alpha/beta/alpha sandwich fold|tRNA(Ile)-lysidine synthase|tRNA(Ile)-lysidine synthase, N-terminal|tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 G3DSA:3.40.50.620|MF_01161|PF01171|SSF52402|SSF82829|TIGR02432 RSDT_RS02520 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002489|IPR017896|IPR017900|IPR023753|IPR028261 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain|Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 G3DSA:1.10.1060.10|G3DSA:2.160.20.60|G3DSA:3.30.70.20|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF01493|PF07992|PF12838|PF14691|PR00368|PS00198|SSF51905|SSF54862|SSF69336 RSDT_RS02525 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002932|IPR013785|IPR017896|IPR017900|IPR024188 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Aldolase-type TIM barrel|Glutamate synthase domain|Glutamate synthase large subunit-like protein GO:0003824|GO:0006537|GO:0015930|GO:0016638|GO:0055114 G3DSA:3.20.20.70|G3DSA:3.30.70.20|PF00037|PF01645|PIRSF006429|PS00198|SSF51395|SSF54862 RSDT_RS02530 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR029055 Nucleophile aminohydrolases, N-terminal G3DSA:3.60.20.10|SSF56235 RSDT_RS02550 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004839|IPR015421|IPR015422|IPR015424|IPR019942 Aminotransferase, class I/classII|LL-diaminopimelate aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0009058|GO:0009089|GO:0010285|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01642|PF00155|SSF53383|TIGR03542 RSDT_RS02555 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001653|IPR018510 Diaminopimelate epimerase, DapF|Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 G3DSA:3.10.310.10|MF_00197|PF01678|PS01326|SSF54506|TIGR00652 RSDT_RS02560 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008146|IPR014746|IPR022147|IPR027303 Glutamine synthetase type III N-terminal|Glutamine synthetase, catalytic domain|Glutamine synthetase, glycine-rich site|Glutamine synthetase/guanido kinase, catalytic domain GO:0003824|GO:0004356|GO:0006807 G3DSA:3.30.590.10|PF00120|PF12437|PS00181|SM01230|SSF55931 RSDT_RS02565 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002187|IPR011322|IPR015867|IPR017918 Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII|Nitrogen regulatory protein PII, conserved site|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0006808|GO:0030234 G3DSA:3.30.70.120|PF00543|PS00638|SM00938|SSF54913 RSDT_RS02575 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001404|IPR003594|IPR019805|IPR020568|IPR020575 Heat shock protein Hsp90 family|Heat shock protein Hsp90, N-terminal|Heat shock protein Hsp90, conserved site|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold GO:0005524|GO:0006457|GO:0006950|GO:0051082 G3DSA:3.30.565.10|MF_00505|PF00183|PF13589|PIRSF002583|PR00775|PS00298|SSF110942|SSF54211|SSF55874 RSDT_RS02585 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 G3DSA:3.30.540.10|PF03320|PIRSF004532|SSF56655|TIGR00330 RSDT_RS02590 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008181|IPR029054 Deoxyuridine triphosphate nucleotidohydrolase|dUTPase-like GO:0004170|GO:0046080 G3DSA:2.70.40.10|PF00692|SSF51283|TIGR00576 RSDT_RS02595 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004636|IPR005814|IPR015421|IPR015422|IPR015424 Acetylornithine/Succinylornithine transaminase family|Aminotransferase class-III|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0006525|GO:0008483|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_01107|PF00202|PIRSF000521|PS00600|SSF53383|TIGR00707 RSDT_RS02615 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|SSF52540 RSDT_RS02625 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 PF03239 RSDT_RS02630 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018470 Periplasmic metal-binding protein Tp34-type PF10634|PIRSF017018 RSDT_RS02635 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018758 Domain of unknown function DUF2318, membrane G3DSA:1.20.1300.10|PF10080 RSDT_RS02640 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003838 ABC transporter permease protein domain GO:0016020 PF02687 RSDT_RS02645 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704 RSDT_RS02650 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS02655 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002220|IPR005263|IPR013785|IPR020624|IPR020625 4-hydroxy-tetrahydrodipicolinate synthase, DapA|Aldolase-type TIM barrel|DapA-like|Schiff base-forming aldolase, active site|Schiff base-forming aldolase, conserved site GO:0003824|GO:0008152|GO:0008840|GO:0009089|GO:0016829 G3DSA:3.20.20.70|MF_00418|PF00701|PIRSF001365|PR00146|PS00665|PS00666|SM01130|SSF51569|TIGR00674 RSDT_RS02660 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000119|IPR010992 Histone-like DNA-binding protein|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|SM00411|SSF47729 RSDT_RS02665 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000352|IPR004374|IPR005139 Peptide chain release factor|Peptide chain release factor 2|Peptide chain release factor class I/class II GO:0003747|GO:0005737|GO:0006415|GO:0016149 G3DSA:1.20.58.410|G3DSA:3.30.160.20|PF00472|PF03462|PS00745|SM00937|SSF75620|TIGR00020 RSDT_RS02670 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003010|IPR004563 Apolipoprotein N-acyltransferase|Carbon-nitrogen hydrolase GO:0006807|GO:0016021|GO:0016410|GO:0016810|GO:0042158 G3DSA:3.60.110.10|MF_01148|PF00795|SSF56317|TIGR00546 RSDT_RS02675 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000644|IPR005170|IPR016166|IPR016169 CBS domain|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|FAD-binding, type 2|Transporter-associated domain GO:0003824|GO:0016614|GO:0050660|GO:0055114 G3DSA:3.10.580.10|G3DSA:3.30.465.10|PF00571|PF03471|SM00116|SM01091|SSF54631|SSF56176 RSDT_RS02680 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002218|IPR004416|IPR020595|IPR023753|IPR026904 FAD/NAD(P)-binding domain|GidA associated domain 3|MnmG-related, conserved site|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0002098|GO:0008033|GO:0016491|GO:0050660|GO:0055114 G3DSA:3.50.50.60|MF_00129|PF01134|PF13932|PS01280|SM01228|SSF51905|TIGR00136 RSDT_RS02700 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001279|IPR022877 Metallo-beta-lactamase|Protein of unknown funcion UPF0173 G3DSA:3.60.15.10|MF_00457|PF13483|SM00849|SSF56281 RSDT_RS02705 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003382|IPR004507 Flavin prenyltransferase UbiX/Pad1|Flavoprotein GO:0003824 G3DSA:3.40.50.1950|PF02441|SSF52507|TIGR00421 RSDT_RS02710 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR027417 AAA+ ATPase domain|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|SM00382|SSF52540 RSDT_RS02715 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003838|IPR025857 ABC transporter permease protein domain|MacB-like periplasmic core domain GO:0016020 PF02687|PF12704 RSDT_RS02725 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 G3DSA:3.40.50.1400|PF06180|PIRSF033579|SSF53800 RSDT_RS02730 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000522|IPR029022|IPR035568 ABC transporter, BtuC-like|ABC transporter, FecCD-like|ABC transporter, FecCD/TroCD-like GO:0005215|GO:0016020 G3DSA:1.10.3470.10|PF01032|SSF81345 RSDT_RS02735 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS02740 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002491 ABC transporter periplasmic binding domain GO:0005488 G3DSA:3.40.50.1980|PF01497|SSF53807 RSDT_RS02745 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000878|IPR006364|IPR012382|IPR014776|IPR014777 Precorrin-2 C(20)-methyltransferase|Precorrin-2 C(20)-methyltransferase domain|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0008757|GO:0009236|GO:0030788 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PIRSF036427|SSF53790|TIGR01467 RSDT_RS02755 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009270 Domain of unknown function DUF927 PF06048 RSDT_RS02760 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025522 Protein of unknown function DUF4410 PF14366 RSDT_RS02770 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000873|IPR020845|IPR025110 AMP-binding enzyme, C-terminal domain|AMP-binding, conserved site|AMP-dependent synthetase/ligase GO:0003824|GO:0008152 G3DSA:2.30.38.10|G3DSA:3.30.300.30|G3DSA:3.40.50.980|PF00501|PF13193|PS00455|SSF56801 RSDT_RS02775 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001387|IPR010982|IPR011051|IPR013096|IPR014710 Cro/C1-type helix-turn-helix domain|Cupin 2, conserved barrel|Lambda repressor-like, DNA-binding domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0003677|GO:0043565 G3DSA:1.10.260.40|G3DSA:2.60.120.10|PF07883|PF13560|SM00530|SSF47413|SSF51182 RSDT_RS02780 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002695|IPR016193|IPR024051 AICAR transformylase domain|AICARFT/IMPCHase bienzyme|Cytidine deaminase-like GO:0003824|GO:0003937|GO:0004643|GO:0006164 G3DSA:3.40.140.20|PF01808|PIRSF000414|SM00798|SSF53927 RSDT_RS02785 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002586|IPR004484|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyrinic acid a,c-diamide synthase CbiA|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236|GO:0042242 G3DSA:3.40.50.300|G3DSA:3.40.50.880|PF01656|PF07685|SSF52317|SSF52540|TIGR00379 RSDT_RS02795 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002684|IPR006638|IPR007197|IPR010722|IPR013785|IPR024177 Aldolase-type TIM barrel|Biotin and thiamin synthesis-associated domain|Biotin synthase|Biotin synthase/Biotin biosynthesis bifunctional protein BioAB|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0004076|GO:0009102|GO:0051536 G3DSA:3.20.20.70|MF_01694|PF04055|PF06968|PIRSF001619|SM00729|SM00876|SSF102114|TIGR00433 RSDT_RS02800 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 PF05443 RSDT_RS02805 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR032323 Protein of unknown function DUF4851 PF16143 RSDT_RS02815 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007730|IPR009009|IPR012997|IPR034718 Endolytic peptidoglycan transglycosylase RlpA|Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain|Sporulation-related domain GO:0016829|GO:0042834 G3DSA:2.40.40.10|G3DSA:3.30.70.1070|MF_02071|PF03330|PF05036|SSF110997|SSF50685|TIGR00413 RSDT_RS02825 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002218|IPR004417|IPR023753 FAD/NAD(P)-binding domain|Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO|tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0005737|GO:0008033|GO:0016491|GO:0047151|GO:0050660|GO:0055114 G3DSA:3.40.50.720|MF_01037|PF01134|SSF51905|TIGR00137 RSDT_RS02830 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001787|IPR028909 Ribosomal protein L21|Ribosomal protein L21-like GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_01363|PF00829|SSF141091|TIGR00061 RSDT_RS02835 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.100|MF_00539|PD003114|PF01016|PR00063|SSF110324|TIGR00062 RSDT_RS02840 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:3.40.50.2000|PF13528|SSF53756 RSDT_RS02850 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004399|IPR013749|IPR029056 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase|Pyridoxamine kinase/Phosphomethylpyrimidine kinase|Ribokinase-like GO:0008972|GO:0009228 G3DSA:3.40.1190.20|PF08543|SSF53613|TIGR00097 RSDT_RS02855 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007863|IPR011249|IPR011765 Metalloenzyme, LuxS/M16 peptidase-like|Peptidase M16, C-terminal|Peptidase M16, N-terminal GO:0003824|GO:0046872 G3DSA:3.30.830.10|PF00675|PF05193|SSF63411 RSDT_RS02885 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011053|IPR033753 Glycine cleavage system H-protein/Simiate|Single hybrid motif G3DSA:2.40.50.100|PF01597|SSF51230 RSDT_RS02890 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004099|IPR006258|IPR012999|IPR016156|IPR023753 Dihydrolipoamide dehydrogenase|FAD/NAD(P)-binding domain|FAD/NAD-linked reductase, dimerisation domain|Pyridine nucleotide-disulphide oxidoreductase, class I, active site|Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0004148|GO:0016491|GO:0016668|GO:0045454|GO:0050660|GO:0055114 G3DSA:3.30.390.30|G3DSA:3.40.50.720|G3DSA:3.50.50.60|PF02852|PF07992|PIRSF000350|PR00368|PR00411|PS00076|SSF51905|SSF55424|TIGR01350 RSDT_RS02900 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR020846 Major facilitator superfamily domain G3DSA:1.20.1250.20|SSF103473 RSDT_RS02915 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004412|IPR023631 Amidase signature domain|Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 G3DSA:3.90.1300.10|MF_00120|PF01425|SSF75304|TIGR00132 RSDT_RS02920 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 MF_00122|PF02686|SSF141000|TIGR00135 RSDT_RS02925 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR012725|IPR013126|IPR018181|IPR029047|IPR029048 Chaperone DnaK|Heat shock protein 70 family|Heat shock protein 70, conserved site|Heat shock protein 70kD, C-terminal domain|Heat shock protein 70kD, peptide-binding domain GO:0005524|GO:0006457|GO:0051082 G3DSA:1.20.1270.10|G3DSA:2.60.34.10|G3DSA:3.30.420.40|MF_00332|PF00012|PR00301|PS00297|PS00329|PS01036|SSF100920|SSF100934|SSF53067|TIGR02350 RSDT_RS02930 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR018449|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|NIL domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.30.70.260|G3DSA:3.40.50.300|PF00005|PF09383|PS00211|SM00382|SM00930|SSF52540|SSF55021 RSDT_RS02935 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 G3DSA:1.10.3720.10|PF00528|SSF161098 RSDT_RS02940 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004872 Lipoprotein NlpA family G3DSA:3.40.190.10|PF03180|PIRSF002854|SSF53850 RSDT_RS02945 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR024654|IPR029052 Calcineurin-like phosphoesterase domain, lpxH type|Metallo-dependent phosphatase-like G3DSA:3.60.21.10|PF12850|SSF56300 RSDT_RS02950 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002698 5-formyltetrahydrofolate cyclo-ligase G3DSA:3.40.50.10420|PF01812|PIRSF006806|SSF100950|TIGR02727 RSDT_RS02960 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004033|IPR023576|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|UbiE/COQ5 methyltransferase|UbiE/COQ5 methyltransferase, conserved site GO:0008168 G3DSA:3.40.50.150|MF_01813|PF01209|PS01183|PS01184|SSF53335|TIGR01934 RSDT_RS02965 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028359 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0016616|GO:0016628|GO:0051287|GO:0055114 G3DSA:1.20.5.170|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500136|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 RSDT_RS02970 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000845|IPR019963 Futalosine hydrolase|Nucleoside phosphorylase domain GO:0003824|GO:0009116|GO:0009234|GO:0016799 G3DSA:3.40.50.1580|MF_00991|PF01048|SSF53167|TIGR03664 RSDT_RS02975 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000092|IPR008949|IPR033749 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase, conserved site GO:0008299 G3DSA:1.10.600.10|PF00348|PS00723|SSF48576 RSDT_RS02980 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003850|IPR010074|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine subunit PurL|Phosphoribosylformylglycinamidine synthase subunit PurS|PurM-like, N-terminal domain GO:0004642|GO:0005737|GO:0006189 G3DSA:3.30.1280.10|G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00420|PF00586|PF02769|SSF55326|SSF56042 RSDT_RS02985 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003362|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PF02397|TIGR03025 RSDT_RS02990 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF13477|PF13692|SSF53756 RSDT_RS03000 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000740|IPR009012|IPR013805 GrpE nucleotide exchange factor|GrpE nucleotide exchange factor, coiled-coil|GrpE nucleotide exchange factor, head GO:0000774|GO:0006457|GO:0042803|GO:0051087 G3DSA:2.30.22.10|G3DSA:3.90.20.20|MF_01151|PF01025|PR00773|PS01071|SSF51064|SSF58014 RSDT_RS03010 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR015889|IPR019613 Intradiol ring-cleavage dioxygenase, core|Protein of unknown function DUF4198 GO:0005506|GO:0016702|GO:0055114 G3DSA:2.60.130.10|PF10670 RSDT_RS03015 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 PF01891 RSDT_RS03025 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003339 ABC/ECF transporter, transmembrane component PF02361 RSDT_RS03030 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS03040 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.58.110|MF_00500|PD004231|PF01649|SSF46992|TIGR00029 RSDT_RS03045 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003593|IPR004605|IPR008823|IPR008824|IPR011991|IPR027417 AAA+ ATPase domain|DNA helicase, Holliday junction RuvB type|DNA helicase, Holliday junction RuvB type, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00016|PD005323|PF05491|PF05496|SM00382|SSF46785|SSF52540|TIGR00635 RSDT_RS03050 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000085|IPR003583|IPR010994|IPR011114|IPR012340|IPR013849 Bacterial DNA recombination protein RuvA|DNA helicase, Holliday junction RuvA type, domain I, bacterial|Helix-hairpin-helix DNA-binding motif, class 1|Holliday junction DNA helicase RuvA, C-terminal|Nucleic acid-binding, OB-fold|RuvA domain 2-like GO:0003677|GO:0003678|GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 G3DSA:1.10.150.20|G3DSA:1.10.8.10|G3DSA:2.40.50.140|MF_00031|PF01330|PF07499|PF14520|SM00278|SSF46929|SSF47781|SSF50249|TIGR00084 RSDT_RS03055 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000385|IPR006638|IPR007197|IPR010505|IPR013483|IPR013785 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|MoaA/nifB/pqqE, iron-sulphur binding, conserved site|Molybdenum cofactor biosynthesis protein A|Molybdenum cofactor synthesis C-terminal|Radical SAM GO:0003824|GO:0006777|GO:0019008|GO:0046872|GO:0051536|GO:0051539 G3DSA:3.20.20.70|PF04055|PF06463|PF13394|PS01305|SM00729|SSF102114|TIGR02666 RSDT_RS03060 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR035160 Protein of unknown function DUF5334 PF17268 RSDT_RS03075 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005839|IPR006638|IPR007197|IPR013848|IPR020612|IPR023404 Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Radical SAM|Radical SAM, alpha/beta horseshoe GO:0003824|GO:0006400|GO:0016740|GO:0051536|GO:0051539 G3DSA:3.80.30.20|PF00919|PF04055|PS01278|SM00729|SSF102114|TIGR00089|TIGR01574 RSDT_RS03080 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 RSDT_RS03090 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001437|IPR006359|IPR018151|IPR022691|IPR023459|IPR028624 Transcription elongation factor GreA|Transcription elongation factor GreA/GreB|Transcription elongation factor GreA/GreB family|Transcription elongation factor, GreA/GreB, C-terminal|Transcription elongation factor, GreA/GreB, N-terminal|Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784|GO:0070063 G3DSA:1.10.287.180|G3DSA:3.10.50.30|MF_00105|PF01272|PF03449|PIRSF006092|PS00829|PS00830|SSF46557|SSF54534|TIGR01462 RSDT_RS03095 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002549 Transmembrane protein TqsA-like PF01594 RSDT_RS03100 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001967|IPR012338|IPR018044 Beta-lactamase/transpeptidase-like|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A|Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 G3DSA:3.40.710.10|PF00768|PR00725|SSF56601 RSDT_RS03105 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|SM00869|SSF103515 RSDT_RS03115 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005835|IPR013446|IPR029044 Glucose-1-phosphate cytidylyltransferase|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain GO:0009058|GO:0016779|GO:0047343 G3DSA:3.90.550.10|PF00483|SSF53448|TIGR02623 RSDT_RS03120 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013445|IPR016040 CDP-glucose 4,6-dehydratase|NAD(P)-binding domain G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|SSF51735|TIGR02622 RSDT_RS03125 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000888|IPR011051|IPR014710 RmlC-like cupin domain|RmlC-like jelly roll fold|dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 G3DSA:2.60.120.10|PD001462|PF00908|SSF51182 RSDT_RS03130 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005697|IPR029062|IPR033752 Class I glutamine amidotransferase-like|Homoserine O-succinyltransferase MetA|MetA family GO:0005737|GO:0008899|GO:0019281 G3DSA:3.40.50.880|MF_00295|PD037892|PF04204|PIRSF000450|SSF52317|TIGR01001 RSDT_RS03135 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001075|IPR002871|IPR007419|IPR010238|IPR016217|IPR034904 BFD-like [2Fe-2S]-binding domain|Fe-S cluster assembly domain|NIF system FeS cluster assembly, NifU|NIF system FeS cluster assembly, NifU, C-terminal|NIF system FeS cluster assembly, NifU, N-terminal|Nitrogen fixation, NifU GO:0005506|GO:0016226|GO:0051536 G3DSA:3.30.300.130|G3DSA:3.90.1010.10|PD002830|PF01106|PF01592|PF04324|PIRSF000375|SSF117916|SSF82649|TIGR02000 RSDT_RS03140 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000192|IPR015421|IPR015422|IPR015424|IPR016454|IPR017772|IPR020578 Aminotransferase class V domain|Aminotransferase class-V, pyridoxal-phosphate binding site|Cysteine desulfurase|Cysteine desulfurase NifS, bacterial/archaeal|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0006520|GO:0030170|GO:0031071 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00266|PIRSF005572|PS00595|SSF53383|TIGR03402 RSDT_RS03150 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005614 NrfD family G3DSA:1.20.1630.10|PF03916 RSDT_RS03155 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13247|PS00198|SSF54862 RSDT_RS03160 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002322|IPR011031|IPR020942 Class III cytochrome C|Cytochrome c, class III|Multihaem cytochrome GO:0009055|GO:0020037 G3DSA:3.90.10.10|PF02085|PR00609|SSF48695 RSDT_RS03165 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001406|IPR020095|IPR020097|IPR020103 Pseudouridine synthase I, TruA|Pseudouridine synthase I, TruA, C-terminal|Pseudouridine synthase I, TruA, alpha/beta domain|Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 G3DSA:3.30.70.580|G3DSA:3.30.70.660|MF_00171|PF01416|PIRSF001430|SSF55120|TIGR00071 RSDT_RS03170 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 MF_01006|PF02673|TIGR00753 RSDT_RS03185 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007557 PSP1, C-terminal PF04468 RSDT_RS03190 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001518|IPR014729|IPR018223|IPR023434|IPR024074 Argininosuccinate synthase|Argininosuccinate synthase, conserved site|Argininosuccinate synthase, type 1 subfamily|Argininosuccinate synthetase, catalytic/multimerisation domain body|Rossmann-like alpha/beta/alpha sandwich fold GO:0004055|GO:0005524|GO:0006526 G3DSA:1.20.5.470|G3DSA:3.40.50.620|G3DSA:3.90.1260.10|MF_00005|PF00764|PS00564|PS00565|SSF52402|SSF69864|TIGR00032 RSDT_RS03195 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000362|IPR008948|IPR009049|IPR020557|IPR022761|IPR024083|IPR029419 Argininosuccinate lyase|Argininosuccinate lyase, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0004056|GO:0042450 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|MF_00006|PF00206|PF14698|PR00145|PR00149|PS00163|SSF48557|TIGR00838 RSDT_RS03205 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001911|IPR018278 Ribosomal protein S21|Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.20.5.1150|MF_00358|PD005521|PF01165|PR00976|PS01181|TIGR00030 RSDT_RS03210 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003789|IPR019004|IPR023168 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Uncharacterised domain YOR215C, mitochondrial GO:0016884 G3DSA:1.10.10.410|G3DSA:1.10.1510.10|PF09424|SSF89095 RSDT_RS03215 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002625 Smr domain PF01713|SM00463|SSF160443 RSDT_RS03220 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002694|IPR006171|IPR006295|IPR013264|IPR030846 DNA primase DnaG, bacteria|DNA primase, DnaG|DNA primase, catalytic core, N-terminal|TOPRIM domain|Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0006269|GO:0008270 G3DSA:3.40.1360.10|G3DSA:3.90.580.10|G3DSA:3.90.980.10|MF_00974|PF01807|PF08275|PF13155|PIRSF002811|SM00400|SM00493|SSF56731|SSF57783|TIGR01391 RSDT_RS03225 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000943|IPR007127|IPR007624|IPR007627|IPR007630|IPR009042|IPR011991|IPR012760|IPR013324|IPR013325|IPR014284|IPR028630 RNA polymerase sigma factor 70, region 1.1|RNA polymerase sigma factor RpoD|RNA polymerase sigma factor RpoD, C-terminal|RNA polymerase sigma factor, region 2|RNA polymerase sigma factor, region 3/4|RNA polymerase sigma-70|RNA polymerase sigma-70 like domain|RNA polymerase sigma-70 region 1.2|RNA polymerase sigma-70 region 2|RNA polymerase sigma-70 region 3|RNA polymerase sigma-70 region 4|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|G3DSA:1.10.601.10|MF_00963|PF00140|PF03979|PF04539|PF04542|PF04545|PR00046|PS00715|PS00716|SSF88659|SSF88946|TIGR02393|TIGR02937 RSDT_RS03230 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004026|IPR016071|IPR035437|IPR035451 Ada DNA repair, metal-binding|Ada-like domain|Staphylococcal nuclease (SNase-like), OB-fold|Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 G3DSA:2.40.50.90|G3DSA:3.40.10.10|PF00565|SM00318|SSF50199|SSF57884 RSDT_RS03250 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004017|IPR004113|IPR006094|IPR009051|IPR016164|IPR016166|IPR016167|IPR016169|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2|Cysteine-rich domain|FAD linked oxidase, N-terminal|FAD-binding, type 2|FAD-binding, type 2, subdomain 1|FAD-linked oxidase, C-terminal|FAD-linked oxidase-like, C-terminal GO:0003824|GO:0016491|GO:0016614|GO:0050660|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.30.43.10|G3DSA:3.30.465.10|PF01565|PF02754|PF02913|PF13183|PS00198|SSF46548|SSF55103|SSF56176 RSDT_RS03255 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 RSDT_RS03260 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 G3DSA:3.40.1130.10|PF01553|SM00563|SSF69593 RSDT_RS03265 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003593|IPR008824|IPR008921|IPR021886|IPR027417|IPR032423 AAA C-terminal domain|AAA+ ATPase domain|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|Holliday junction DNA helicase ruvB, N-terminal|MgsA AAA+ ATPase C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0006260|GO:0006281|GO:0006310|GO:0009378 G3DSA:1.10.3710.10|G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF05496|PF12002|PF16193|SM00382|SSF48019|SSF52540 RSDT_RS03270 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006700|IPR015947|IPR029026|IPR029028 Alpha/beta knot methyltransferases|PUA-like domain|Ribosomal RNA small subunit methyltransferase E|tRNA (guanine-N1-)-methyltransferase, N-terminal GO:0006364|GO:0008168 G3DSA:3.40.1280.10|PF04452|PIRSF015601|SSF75217|SSF88697|TIGR00046 RSDT_RS03290 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003812|IPR011991 Fido domain|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|G3DSA:1.10.3290.10|SSF46785 RSDT_RS03295 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005474|IPR005475|IPR005477|IPR009014|IPR020826|IPR029061|IPR033248 Deoxyxylulose-5-phosphate synthase|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0008152|GO:0008661|GO:0016114 G3DSA:3.40.50.920|G3DSA:3.40.50.970|MF_00315|PF02779|PF02780|PF13292|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00204 RSDT_RS03300 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000092|IPR008949|IPR033749 Isoprenoid synthase domain|Polyprenyl synthetase|Polyprenyl synthetase, conserved site GO:0008299 G3DSA:1.10.600.10|PF00348|PS00444|PS00723|SSF48576 RSDT_RS03305 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 G3DSA:1.10.287.1040|MF_00337|PD028235|PF02609|PIRSF006488|SSF116842|TIGR01280 RSDT_RS03310 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003753|IPR020579|IPR025824 Exonuclease VII, large subunit|Exonuclease VII, large subunit, C-terminal|OB-fold nucleic acid binding domain GO:0003676|GO:0006308|GO:0008855|GO:0009318 G3DSA:2.40.50.140|MF_00378|PF02601|PF13742|TIGR00237 RSDT_RS03315 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002314|IPR002316|IPR004154|IPR004500|IPR007214|IPR023717 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Proline-tRNA ligase, class IIa|Prolyl-tRNA synthetase, class IIa, bacterial-type|Prolyl-tRNA synthetase, class IIa, type 1|YbaK/aminoacyl-tRNA synthetase-associated domain GO:0000166|GO:0002161|GO:0004812|GO:0004827|GO:0005524|GO:0005737|GO:0006418|GO:0006433 G3DSA:3.30.930.10|G3DSA:3.40.50.800|G3DSA:3.90.960.10|MF_01569|PF00587|PF03129|PF04073|PIRSF001535|PR01046|SSF52954|SSF55681|SSF55826|TIGR00409 RSDT_RS03320 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004588|IPR011060|IPR016425|IPR029065 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial|4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type|Enolase C-terminal domain-like|Ribulose-phosphate binding barrel GO:0003824|GO:0005506|GO:0008152|GO:0008299|GO:0016114|GO:0046429|GO:0055114 G3DSA:3.20.20.120|MF_00159|PF04551|PIRSF004640|SSF51366|SSF56014|TIGR00612 RSDT_RS03325 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004396|IPR006073|IPR012675|IPR012676|IPR013029|IPR023192|IPR027417 Beta-grasp domain|Domain of unknown function DUF933|GTP binding domain|P-loop containing nucleoside triphosphate hydrolase|Ribosome-binding ATPase YchF/Obg-like ATPase 1|TGS-like|TGS-like domain GO:0005525 G3DSA:1.10.150.300|G3DSA:3.10.20.30|G3DSA:3.40.50.300|MF_00944|PF01926|PF06071|PIRSF006641|PR00326|SSF52540|SSF81271|TIGR00092 RSDT_RS03330 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002028|IPR011060|IPR013785|IPR018204 Aldolase-type TIM barrel|Ribulose-phosphate binding barrel|Tryptophan synthase, alpha chain|Tryptophan synthase, alpha chain, active site GO:0003824|GO:0004834|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00131|PF00290|PS00167|SSF51366|TIGR00262 RSDT_RS03335 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001926|IPR006653|IPR006654|IPR023026 Tryptophan synthase beta chain/beta chain-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme|Tryptophan synthase, beta chain|Tryptophan synthase, beta chain, conserved site GO:0000162|GO:0004834|GO:0006568 G3DSA:3.40.50.1100|MF_00133|PF00291|PIRSF001413|PS00168|SSF53686|TIGR00263 RSDT_RS03340 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001240|IPR011060|IPR013785 Aldolase-type TIM barrel|N-(5'phosphoribosyl) anthranilate isomerase (PRAI)|Ribulose-phosphate binding barrel GO:0003824|GO:0004640|GO:0006568|GO:0008152 G3DSA:3.20.20.70|MF_00135|PF00697|SSF51366 RSDT_RS03345 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001468|IPR011060|IPR013785|IPR013798 Aldolase-type TIM barrel|Indole-3-glycerol phosphate synthase|Indole-3-glycerol phosphate synthase, conserved site|Ribulose-phosphate binding barrel GO:0003824|GO:0004425|GO:0006568|GO:0008152 G3DSA:3.20.20.70|PF00218|PS00614|SSF51366 RSDT_RS03350 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000312|IPR005940|IPR006221|IPR017459|IPR017926|IPR029062 Anthranilate phosphoribosyl transferase|Anthranilate synthase/para-aminobenzoate synthase like domain|Class I glutamine amidotransferase-like|Glutamine amidotransferase|Glycosyl transferase family 3, N-terminal domain|Glycosyl transferase, family 3 GO:0000162|GO:0004048|GO:0008152|GO:0016757 G3DSA:1.20.970.10|G3DSA:3.40.1030.10|G3DSA:3.40.50.880|MF_00211|PF00117|PF00591|PF02885|PR00096|PR00097|PR00099|SSF47648|SSF52317|SSF52418|TIGR00566|TIGR01245 RSDT_RS03355 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005801|IPR006805|IPR015890|IPR019999 ADC synthase|Anthranilate synthase component I, N-terminal|Anthranilate synthase component I-like|Chorismate-utilising enzyme, C-terminal GO:0009058 G3DSA:3.60.120.10|PF00425|PF04715|PR00095|SSF56322 RSDT_RS03360 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004808|IPR005135|IPR020848 AP endonuclease 1|AP endonuclease 1, conserved site|Endonuclease/exonuclease/phosphatase GO:0003677|GO:0004518|GO:0004519|GO:0005622|GO:0006281 G3DSA:3.60.10.10|PF03372|PS00727|SSF56219|TIGR00195|TIGR00633 RSDT_RS03380 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000819|IPR008283|IPR011356|IPR023042 Peptidase M17, leucine aminopeptidase|Peptidase M17, leucine aminopeptidase/peptidase B|Peptidase M17, leucyl aminopeptidase, C-terminal|Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0005737|GO:0006508|GO:0008235|GO:0019538|GO:0030145 G3DSA:3.40.220.10|G3DSA:3.40.630.10|MF_00181|PF00883|PF02789|PR00481|PS00631|SSF52949|SSF53187 RSDT_RS03385 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000878|IPR003043|IPR003754|IPR006366|IPR012409|IPR014776|IPR014777 Sirohaem synthase|Tetrapyrrole biosynthesis, uroporphyrinogen III synthase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site|Uroporphyrin-III C-methyltransferase GO:0004851|GO:0004852|GO:0006779|GO:0008152|GO:0008168|GO:0009236|GO:0019354|GO:0033014|GO:0043115|GO:0051266|GO:0051287|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.10090|PF00590|PF02602|PIRSF036426|PS00839|SSF53790|SSF69618|TIGR01469 RSDT_RS03390 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001555|IPR002376|IPR004607 Formyl transferase, N-terminal|Phosphoribosylglycinamide formyltransferase|Phosphoribosylglycinamide formyltransferase, active site GO:0004644|GO:0006189|GO:0009058|GO:0016742 G3DSA:3.40.50.170|MF_01930|PF00551|PS00373|SSF53328|TIGR00639 RSDT_RS03395 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001789|IPR002078|IPR002197|IPR003593|IPR009057|IPR011006|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|CheY-like superfamily|DNA binding HTH domain, Fis-type|Homeobox domain-like|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Signal transduction response regulator, receiver domain GO:0000160|GO:0003677|GO:0005524|GO:0006355|GO:0008134|GO:0043565 G3DSA:1.10.10.60|G3DSA:1.10.8.60|G3DSA:3.40.50.2300|G3DSA:3.40.50.300|PF00072|PF00158|PF02954|PR01590|PS00675|PS00676|PS00688|SM00382|SM00448|SSF46689|SSF52172|SSF52540 RSDT_RS03405 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005995|IPR006124|IPR011258|IPR017849|IPR017850 Alkaline phosphatase-like, alpha/beta/alpha|Alkaline-phosphatase-like, core domain|BPG-independent PGAM, N-terminal|Metalloenzyme|Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0003824|GO:0004619|GO:0005737|GO:0006007|GO:0008152|GO:0030145|GO:0046872 G3DSA:3.40.1450.10|G3DSA:3.40.720.10|MF_01038|PF01676|PF06415|PIRSF001492|SSF53649|SSF64158|TIGR01307 RSDT_RS03410 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004394 Protein Iojap/ribosomal silencing factor RsfS G3DSA:3.30.460.10|MF_01477|PF02410|SSF81301|TIGR00090 RSDT_RS03415 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000183|IPR002986|IPR009006|IPR022643|IPR022644|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Diaminopimelate decarboxylase, LysA|Orn/DAP/Arg decarboxylase 2, C-terminal|Orn/DAP/Arg decarboxylase 2, N-terminal|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0008836|GO:0009089 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_02120|PF00278|PF02784|PR01179|PR01181|SSF50621|SSF51419|TIGR01048 RSDT_RS03420 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 PF01554|PIRSF006603 RSDT_RS03425 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain G3DSA:3.10.50.40|PF00254|SSF54534 RSDT_RS03430 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007197|IPR013785|IPR020050|IPR022431 Aldolase-type TIM barrel|Cyclic dehypoxanthine futalosine synthase|FO synthase, subunit 2|Radical SAM GO:0003824|GO:0009234|GO:0016765|GO:0051536 G3DSA:3.20.20.70|MF_00992|PF04055|PIRSF004762|SSF102114|TIGR00423|TIGR03699 RSDT_RS03435 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007197|IPR013785|IPR020050|IPR022432 Aldolase-type TIM barrel|Aminodeoxyfutalosine synthase|FO synthase, subunit 2|Radical SAM GO:0003824|GO:0009234|GO:0016765|GO:0051536 G3DSA:3.20.20.70|MF_00993|PF04055|PIRSF004762|SSF102114|TIGR00423|TIGR03700 RSDT_RS03440 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003773|IPR030869 1,4-dihydroxy-6-naphtoate synthase|Menaquinone biosynthesis enzyme GO:0009234|GO:0016829 G3DSA:3.40.190.10|MF_00996|PF02621|SSF53850 RSDT_RS03445 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025161 Putative transposase IS4/IS5 family PF13340 RSDT_RS03450 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000362|IPR008948|IPR018951|IPR020557|IPR022761|IPR024083 Fumarase C, C-terminal|Fumarase/histidase, N-terminal|Fumarate lyase family|Fumarate lyase, N-terminal|Fumarate lyase, conserved site|L-Aspartase-like GO:0003824|GO:0006099|GO:0016829 G3DSA:1.10.275.10|G3DSA:1.10.40.30|G3DSA:1.20.200.10|PF00206|PF10415|PR00145|PR00149|PS00163|SSF48557 RSDT_RS03455 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 PF03605|PIRSF004539|TIGR00770 RSDT_RS03460 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001650|IPR005259|IPR006935|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|Primosomal protein N' GO:0003677|GO:0004003|GO:0005524|GO:0006260|GO:0016787|GO:0032508 G3DSA:3.40.50.300|MF_00983|PF00271|PF04851|SM00487|SM00490|SSF52540|TIGR00595 RSDT_RS03465 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002292|IPR006130|IPR006131|IPR006132|IPR024904 Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Ornithine carbamoyltransferase|Ornithine/putrescine carbamoyltransferase GO:0004585|GO:0006520|GO:0006591|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_01109|PF00185|PF02729|PR00100|PR00102|PS00097|SSF53671|TIGR00658 RSDT_RS03475 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002082|IPR006130|IPR006131|IPR006132 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|MF_00001|PF00185|PF02729|PR00100|PR00101|PS00097|SSF53671|TIGR00670 RSDT_RS03480 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002195|IPR004722|IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Dihydroorotase|Dihydroorotase, conserved site|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0004151|GO:0006221|GO:0016787|GO:0016810|GO:0016812|GO:0046872 G3DSA:2.30.40.10|G3DSA:3.20.20.140|MF_00220_B|PF01979|PS00482|PS00483|SSF51338|SSF51556|TIGR00857 RSDT_RS03485 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|SSF53383 RSDT_RS03490 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001342|IPR005106|IPR016040|IPR016204 Aspartate/homoserine dehydrogenase, NAD-binding|Homoserine dehydrogenase|Homoserine dehydrogenase, catalytic|NAD(P)-binding domain GO:0004412|GO:0006520|GO:0016491|GO:0050661|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.30.70.260|G3DSA:3.40.50.720|PF00742|PF03447|PIRSF000098|SSF51735|SSF55021|SSF55347 RSDT_RS03495 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001917|IPR004839|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferase, class-II, pyridoxal-phosphate binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0008152|GO:0009058|GO:0016740|GO:0030170 G3DSA:3.90.1150.10|PF00155|PS00599|SSF53383 RSDT_RS03500 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|SM00869|SSF103515 RSDT_RS03520 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000671|IPR004419|IPR023430 Peptidase A31 family|Peptidase A31, hydrogenase expression/formation protein|Peptidase HybD-like domain GO:0008047|GO:0008233|GO:0016485|GO:0046872 G3DSA:3.40.50.1450|PF01750|PR00446|SSF53163|TIGR00072|TIGR00140 RSDT_RS03525 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001732|IPR008927|IPR014026|IPR014027|IPR016040|IPR017476|IPR028357 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|UDP-glucose 6-dehydrogenase, bacterial type|UDP-glucose/GDP-mannose dehydrogenase|UDP-glucose/GDP-mannose dehydrogenase, C-terminal|UDP-glucose/GDP-mannose dehydrogenase, N-terminal|UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0000271|GO:0003979|GO:0016616|GO:0051287|GO:0055114 G3DSA:1.20.5.170|G3DSA:3.40.50.720|PF00984|PF03720|PF03721|PIRSF000124|PIRSF500134|SM00984|SSF48179|SSF51735|SSF52413|TIGR03026 RSDT_RS03535 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002314|IPR002317|IPR010978|IPR015866 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Serine-tRNA ligase, type1|Serine-tRNA synthetase, type1, N-terminal|tRNA-binding arm GO:0000166|GO:0004812|GO:0004828|GO:0005524|GO:0005737|GO:0006418|GO:0006434 G3DSA:1.10.287.40|G3DSA:3.30.930.10|MF_00176|PF00587|PF02403|PIRSF001529|PR00981|SSF46589|SSF55681|TIGR00414 RSDT_RS03540 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR028081|IPR028082 Leucine-binding protein domain|Periplasmic binding protein-like I G3DSA:3.40.50.2300|PF13458|SSF53822 RSDT_RS03570 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003148|IPR006037|IPR006153|IPR016040 Cation/H+ exchanger|NAD(P)-binding domain|Regulator of K+ conductance, C-terminal|Regulator of K+ conductance, N-terminal GO:0006812|GO:0006813|GO:0008324|GO:0015299|GO:0016021|GO:0055085 G3DSA:1.20.91.10|G3DSA:3.30.70.1450|G3DSA:3.40.50.720|PF00999|PF02080|PF02254|SSF116726|SSF51735 RSDT_RS03575 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003141|IPR004013|IPR004805|IPR011708|IPR016195|IPR029460 Bacterial DNA polymerase III, alpha subunit|DNA polymerase III, alpha subunit|DNA polymerase, helix-hairpin-helix motif|PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003824|GO:0006260|GO:0008408 G3DSA:1.10.150.280|G3DSA:2.40.50.140|G3DSA:3.20.20.140|PF02811|PF07733|PF14579|SM00481|SSF89550|TIGR00594 RSDT_RS03580 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein G3DSA:3.30.479.10|PF01242|PIRSF006113|SSF55620|TIGR03367 RSDT_RS03585 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008914 Phosphatidylethanolamine-binding protein SSF49777 RSDT_RS03590 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004838|IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Aminotransferases, class-I, pyridoxal-phosphate-binding site|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|PS00105|SSF53383 RSDT_RS03595 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013708|IPR016040|IPR022893 NAD(P)-binding domain|Shikimate dehydrogenase family|Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 G3DSA:3.40.50.10860|G3DSA:3.40.50.720|MF_00222|PF08501|SSF51735|SSF53223 RSDT_RS03600 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001874 Dehydroquinase, class II GO:0003855 G3DSA:3.40.50.9100|MF_00169|PD004527|PF01220|PIRSF001399|SSF52304|TIGR01088 RSDT_RS03605 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009051|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Alpha-helical ferredoxin GO:0051536 G3DSA:3.30.70.20|PF13534|PS00198|SSF46548 RSDT_RS03610 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004017 Cysteine-rich domain PF02754 RSDT_RS03615 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017896|IPR017900|IPR023753 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|FAD/NAD(P)-binding domain GO:0016491|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.50.50.60|PF00037|PF07992|PF12831|PF13237|PS00198|SSF51905|SSF54862 RSDT_RS03620 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003813|IPR009051|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Methyl-viologen-reducing hydrogenase, delta subunit GO:0015948|GO:0051536|GO:0055114 G3DSA:3.30.70.20|PF02662|PF13183|PS00198|SSF46548 RSDT_RS03625 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009051|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin GO:0051536 G3DSA:1.10.1060.10|G3DSA:3.30.70.20|PF17179|PS00198|SSF46548 RSDT_RS03630 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001221|IPR001433|IPR001709|IPR012165|IPR017938|IPR019480 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Flavoprotein pyridine nucleotide cytochrome reductase|Oxidoreductase FAD/NAD(P)-binding|Phenol hydroxylase reductase|Riboflavin synthase-like beta-barrel GO:0006221|GO:0016491|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF00175|PF10418|PIRSF006816|PR00371|PR00410|SSF52343|SSF63380 RSDT_RS03635 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010486 HNS-dependent expression A/B G3DSA:1.10.890.10|PF06411 RSDT_RS03640 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006597 Sel1-like repeat G3DSA:2.60.40.1180|PF08238|SM00671|SSF81901 RSDT_RS03655 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002912|IPR003607|IPR004095|IPR004811|IPR007685|IPR012675|IPR012676 ACT domain|Beta-grasp domain|HD/PDEase domain|RelA/SpoT|RelA/SpoT family|TGS|TGS-like GO:0015969 G3DSA:3.10.20.30|G3DSA:3.30.460.10|G3DSA:3.30.70.260|PF02824|PF04607|PF13291|PF13328|SM00471|SM00954|SSF109604|SSF55021|SSF81271|SSF81301|TIGR00691 RSDT_RS03665 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002661|IPR023584 Ribosome recycling factor|Ribosome recycling factor domain GO:0006412 G3DSA:1.10.132.20|MF_00040|PF01765|SSF55194|TIGR00496 RSDT_RS03670 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001048|IPR011817|IPR015963 Aspartate/glutamate/uridylate kinase|Uridylate kinase|Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0009041|GO:0033862 G3DSA:3.40.1160.10|MF_01220_B|PF00696|PIRSF005650|SSF53633|TIGR02075 RSDT_RS03680 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000183|IPR002985|IPR009006|IPR022644|IPR022653|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Arginine decarboxylase|Orn/DAP/Arg decarboxylase 2, N-terminal|Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site|Ornithine/DAP/Arg decarboxylase|PLP-binding barrel GO:0003824|GO:0006527|GO:0008295|GO:0008792 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01417|PF02784|PIRSF001336|PR01179|PR01180|PS00878|SSF51419|TIGR01273 RSDT_RS03690 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011991|IPR014793 Dissimilatory sulphite reductase D|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF08679|SSF46785 RSDT_RS03695 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005117|IPR006067|IPR011808|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Sulphite reductase, dissimilatory-type beta subunit GO:0006790|GO:0009055|GO:0016491|GO:0018551|GO:0020037|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.30.413.10|G3DSA:3.90.480.10|PF00037|PF01077|PF03460|PS00198|SSF54862|SSF55124|SSF56014|TIGR02066 RSDT_RS03700 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005117|IPR006067|IPR011806 Nitrite/Sulfite reductase ferredoxin-like domain|Nitrite/sulphite reductase 4Fe-4S domain|Sulphite reductase, dissimilatory-type alpha subunit GO:0016491|GO:0018551|GO:0020037|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.30.413.10|PF01077|PF03460|SSF54862|SSF55124|SSF56014|TIGR02064 RSDT_RS03710 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 PF01384 RSDT_RS03715 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018445 Putative phosphate transport regulator PF01865 RSDT_RS03725 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001692|IPR012131|IPR016161|IPR022695 Aldehyde/histidinol dehydrogenase|Histidinol dehydrogenase|Histidinol dehydrogenase, conserved site|Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008152|GO:0008270|GO:0016491|GO:0051287|GO:0055114 G3DSA:3.40.50.1980|MF_01024|PF00815|PIRSF000099|PR00083|PS00611|SSF53720|TIGR00069 RSDT_RS03730 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001636|IPR018236|IPR028923 Phosphoribosylaminoimidazole-succinocarboxamide synthase|SAICAR synthetase, conserved site|SAICAR synthetase/ADE2, N-terminal GO:0004639|GO:0006164 G3DSA:3.30.200.20|G3DSA:3.30.470.20|MF_00137|PF01259|PS01057|SSF56104|TIGR00081 RSDT_RS03735 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002347|IPR014358|IPR016040 Enoyl-[acyl-carrier-protein] reductase (NADH)|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004318|GO:0006633|GO:0055114 G3DSA:3.40.50.720|PF13561|PIRSF000094|PR00081|SSF51735 RSDT_RS03745 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011010|IPR023109|IPR025166 DNA breaking-rejoining enzyme, catalytic core|Integrase, DNA-binding domain|Integrase/recombinase, N-terminal GO:0003677 G3DSA:1.10.150.130|PF13356|SSF56349 RSDT_RS03755 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000415|IPR023312|IPR029479 Nitroreductase|Nitroreductase-like|Putatuve nitroreductase, C-terminal, bacterial GO:0016491 G3DSA:2.20.180.10|G3DSA:3.40.109.10|PF00881|SSF55469 RSDT_RS03760 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000415|IPR029479 Nitroreductase|Nitroreductase-like GO:0016491 G3DSA:3.40.109.10|PF00881|SSF55469 RSDT_RS03765 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005000|IPR015813 HpcH/HpaI aldolase/citrate lyase domain|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 G3DSA:3.20.20.60|PF03328|SSF51621 RSDT_RS03770 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 G3DSA:3.40.50.720|PF01370|SSF51735 RSDT_RS03775 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003329|IPR029044 Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF02348|SSF53448 RSDT_RS03780 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001451|IPR011004 Hexapeptide repeat|Trimeric LpxA-like G3DSA:2.160.10.10|PF00132|SSF51161 RSDT_RS03785 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR023214 HAD-like domain G3DSA:3.40.50.1000|PF13419|SSF56784 RSDT_RS03810 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001453 MoaB/Mog domain G3DSA:3.40.980.10|PF00994|SM00852|SSF53218 RSDT_RS03815 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000305|IPR001162|IPR001943|IPR003583|IPR004791|IPR010994 GIY-YIG nuclease superfamily|Helix-hairpin-helix DNA-binding motif, class 1|RuvA domain 2-like|UVR domain|UvrABC system, subunit C|UvrC family homology region GO:0003677|GO:0005515|GO:0005737|GO:0006281|GO:0009380|GO:0009381 G3DSA:1.10.150.20|G3DSA:3.40.1440.10|G3DSA:4.10.860.10|MF_00203|PF01541|PF02151|PF08459|PF12826|SM00278|SM00465|SSF46600|SSF47781|SSF82771|TIGR00194 RSDT_RS03825 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.10.60|G3DSA:3.30.1190.10|PF01381|SM00530|SSF47413 RSDT_RS03830 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR012893|IPR017508 HipA, N-terminal subdomain 1|HipA-like, C-terminal PF07804|PF13657 RSDT_RS03840 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR029063|IPR031303 DNA methylase, C-5 cytosine-specific, conserved site|S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.90.120.10|PF00145|PS00095|SSF53335 RSDT_RS03850 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004603|IPR011335 DNA mismatch endonuclease vsr|Restriction endonuclease type II-like GO:0004519|GO:0006298 G3DSA:3.40.960.10|PF03852|PIRSF018267|SSF52980|TIGR00632 RSDT_RS03855 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010260 DNA-binding transcriptional activator AlpA PF05930 RSDT_RS03860 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025166 Integrase, DNA-binding domain PF13356 RSDT_RS03870 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009009|IPR012997|IPR034718 Endolytic peptidoglycan transglycosylase RlpA|Rare lipoprotein A|RlpA-like protein, double-psi beta-barrel domain GO:0016829 G3DSA:2.40.40.10|MF_02071|PF03330|SSF50685|TIGR00413 RSDT_RS03885 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 MF_00191|PF02401|TIGR00216 RSDT_RS03890 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001269|IPR013785|IPR024036 Aldolase-type TIM barrel|tRNA-dihydrouridine synthase|tRNA-dihydrouridine synthase, putative, C-terminal GO:0003824|GO:0008033|GO:0016491|GO:0017150|GO:0050660|GO:0055114 G3DSA:1.10.1200.80|G3DSA:3.20.20.70|PF01207|PIRSF006621|SSF51395 RSDT_RS03895 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003593|IPR003959|IPR004491|IPR019489|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, core|Clp ATPase, C-terminal|Heat shock protein HslU|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_00249|PF07724|SM00382|SM01086|SSF52540|TIGR00390 RSDT_RS03905 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001667|IPR004097 DDH domain|DHHA2 domain GO:0005737|GO:0016462 G3DSA:3.90.1640.10|PF01368|PF02833|SM01131|SSF64182 RSDT_RS03910 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR022374|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter, ATP-binding protein, ChvD|ABC transporter, conserved site|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12848|PS00211|SM00382|SSF52540|TIGR03719 RSDT_RS03915 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 G3DSA:3.40.50.510|PF03610|SSF53062 RSDT_RS03920 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005337|IPR027417 P-loop containing nucleoside triphosphate hydrolase|RapZ-like family GO:0005524 G3DSA:3.40.50.300|MF_00636|PF03668|PIRSF005052|SSF52540 RSDT_RS03925 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003489|IPR032528|IPR034694 Ribosomal protein S30Ae/sigma 54 modulation protein|Ribosome hibernation promoting factor, long/plastid|Sigma 54 modulation/S30EA ribosomal protein, C-terminal GO:0044238 G3DSA:3.30.160.100|MF_00839|PF02482|PF16321|SSF69754|TIGR00741 RSDT_RS03930 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000394|IPR007046|IPR007634|IPR011991 RNA polymerase sigma factor 54|RNA polymerase sigma factor 54, DNA-binding|RNA polymerase sigma factor 54, core-binding|Winged helix-turn-helix DNA-binding domain GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 G3DSA:1.10.10.10|PF00309|PF04552|PF04963|PIRSF000774|PR00045|PS00717|PS00718|TIGR02395 RSDT_RS03935 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003789|IPR004413|IPR006075|IPR017958|IPR018027|IPR023168 Asn/Gln amidotransferase|Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic|Aspartyl/glutamyl-tRNA amidotransferase subunit B-related|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal|Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit|Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016874|GO:0016884 G3DSA:1.10.10.410|MF_00121|PF02637|PF02934|PS01234|SM00845|SSF55931|SSF89095|TIGR00133 RSDT_RS03940 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002504|IPR016064|IPR017437|IPR017438 ATP-NAD kinase, PpnK-type, all-beta|Inorganic polyphosphate/ATP-NAD kinase, domain 1|NAD kinase|NAD kinase/diacylglycerol kinase-like domain GO:0003951|GO:0006741|GO:0008152|GO:0019674 G3DSA:2.60.200.30|G3DSA:3.40.50.10330|MF_00361|PF01513|SSF111331 RSDT_RS03945 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain G3DSA:2.20.25.10|PF09723|SM00834|TIGR02605 RSDT_RS03950 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000860|IPR022417|IPR022418|IPR022419 Porphobilinogen deaminase|Porphobilinogen deaminase, C-terminal|Porphobilinogen deaminase, N-terminal|Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 G3DSA:3.30.160.40|G3DSA:3.40.190.10|MF_00260|PF01379|PF03900|PIRSF001438|PR00151|PS00533|SSF53850|SSF54782|TIGR00212 RSDT_RS03955 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008269|IPR014721|IPR020568 Peptidase S16, Lon proteolytic domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0004176|GO:0004252|GO:0006508 G3DSA:3.30.230.10|PF05362|PF13654|PR00830|SSF54211 RSDT_RS03960 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001497|IPR008332|IPR011991|IPR014048|IPR023546 Methylated-DNA--protein-cysteine methyltransferase|Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding|Methylated-DNA-[protein]-cysteine S-methyltransferase, active site|Methylguanine DNA methyltransferase, ribonuclease-like domain|Winged helix-turn-helix DNA-binding domain GO:0003824|GO:0003908|GO:0006281 G3DSA:1.10.10.10|G3DSA:3.30.160.70|MF_00772|PF01035|PS00374|SSF46767|SSF53155|TIGR00589 RSDT_RS03970 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002104|IPR004107|IPR011010|IPR011932|IPR013762|IPR023009|IPR023109 DNA breaking-rejoining enzyme, catalytic core|Integrase, SAM-like, N-terminal|Integrase, catalytic domain|Integrase-like, catalytic domain|Integrase/recombinase, N-terminal|Tyrosine recombinase XerC/XerD|Tyrosine recombinase XerD GO:0003677|GO:0006310|GO:0009009|GO:0015074 G3DSA:1.10.150.130|G3DSA:1.10.443.10|MF_01808|PF00589|PF02899|SSF56349|TIGR02225 RSDT_RS03985 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002481|IPR011991 Ferric-uptake regulator|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01475|SSF46785 RSDT_RS03990 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011037 Pyruvate kinase-like, insert domain G3DSA:2.40.33.20|SSF50800 RSDT_RS03995 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR004602|IPR017871|IPR027417 ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase|UvrABC system subunit A GO:0005524|GO:0006289|GO:0009380|GO:0009381|GO:0016887 G3DSA:1.10.8.280|G3DSA:3.30.190.20|G3DSA:3.40.50.300|PF00005|PS00211|SSF52540|TIGR00630 RSDT_RS04000 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000688|IPR020538 Hydrogenase nickel incorporation protein HypA/HybF|Hydrogenase nickel incorporation protein HypA/HybF, conserved site GO:0006464|GO:0016151 PF01155|PIRSF004761|PS01249 RSDT_RS04005 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003495|IPR004392|IPR012202|IPR027417 CobW/HypB/UreG, nucleotide-binding domain|Hydrogenase accessory protein HypB|P-loop containing nucleoside triphosphate hydrolase|[NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0006461|GO:0016151 G3DSA:3.40.50.300|PF02492|PIRSF005624|SSF52540|TIGR00073 RSDT_RS04010 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007730 Sporulation-related domain GO:0042834 G3DSA:3.30.70.1070|PF05036|SSF110997 RSDT_RS04015 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001538|IPR005835|IPR006375|IPR011051|IPR014710|IPR029044 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase|Mannose-6-phosphate isomerase, type II, C-terminal|Nucleotide-diphospho-sugar transferases|Nucleotidyl transferase domain|RmlC-like cupin domain|RmlC-like jelly roll fold GO:0000271|GO:0005976|GO:0009058|GO:0016779 G3DSA:2.60.120.10|G3DSA:3.90.550.10|PF00483|PF01050|SSF51182|SSF53448|TIGR01479 RSDT_RS04020 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006424|IPR016040|IPR020828|IPR020829|IPR020830|IPR020831 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain|Glyceraldehyde 3-phosphate dehydrogenase, active site|Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain|Glyceraldehyde-3-phosphate dehydrogenase, type I|Glyceraldehyde/Erythrose phosphate dehydrogenase family|NAD(P)-binding domain GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF00044|PF02800|PIRSF000149|PR00078|PS00071|SM00846|SSF51735|SSF55347|TIGR01534 RSDT_RS04025 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001182|IPR011923|IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site|Probable peptidoglycan glycosyltransferase FtsW/RodA|Rod shape-determining protein RodA GO:0007049|GO:0008360|GO:0016021|GO:0051301 PF01098|PS00428|TIGR02210 RSDT_RS04030 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001460|IPR005311|IPR012338|IPR017790 Beta-lactamase/transpeptidase-like|Penicillin-binding protein 2|Penicillin-binding protein, dimerisation domain|Penicillin-binding protein, transpeptidase GO:0008658|GO:0016020 G3DSA:3.40.710.10|G3DSA:3.90.1310.10|PF00905|PF03717|SSF56519|SSF56601|TIGR03423 RSDT_RS04040 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007221 Rod shape-determining protein MreC GO:0008360 PF04085|PIRSF038471|TIGR00219 RSDT_RS04045 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004753 Cell shape determining protein MreB GO:0000902 G3DSA:3.30.420.40|PF06723|PR01652|SSF53067|TIGR00904 RSDT_RS04050 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003607|IPR006674 HD domain|HD/PDEase domain G3DSA:1.10.3210.10|PF01966|SM00471|SSF109604 RSDT_RS04055 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002828|IPR030048 Survival protein SurE|Survival protein SurE-like phosphatase/nucleotidase GO:0008252|GO:0016787 G3DSA:3.40.1210.10|MF_00060|PF01975|SSF64167|TIGR00087 RSDT_RS04060 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003607|IPR004365|IPR006674|IPR006675 HD domain|HD/PDEase domain|HDIG domain|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 G3DSA:1.10.3210.10|G3DSA:2.40.50.140|PF01336|PF01966|SM00471|SSF109604|TIGR00277 RSDT_RS04065 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018094|IPR018095|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Thymidylate kinase|Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 G3DSA:3.40.50.300|MF_00165|PF02223|PS01331|SSF52540|TIGR00041 RSDT_RS04070 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR023801 Histone deacetylase domain G3DSA:3.40.800.20|PF00850|SSF52768 RSDT_RS04075 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005097|IPR016040|IPR032095 NAD(P)-binding domain|Saccharopine dehydrogenase, C-terminal|Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|PF03435|PF16653|SSF51735 RSDT_RS04080 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005730|IPR009006|IPR022643|IPR029066 Alanine racemase/group IV decarboxylase, C-terminal|Carboxynorspermidine decarboxylase|Orn/DAP/Arg decarboxylase 2, C-terminal|PLP-binding barrel GO:0003824|GO:0016831|GO:0045312 G3DSA:2.40.37.10|G3DSA:3.20.20.10|PF00278|PIRSF038941|SSF50621|SSF51419|TIGR01047 RSDT_RS04085 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002509|IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel|NodB homology domain GO:0003824|GO:0005975|GO:0016810 G3DSA:3.20.20.370|PF01522|SSF88713 RSDT_RS04095 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011204|IPR011991 Virulence protein RhuM-like|Winged helix-turn-helix DNA-binding domain G3DSA:1.10.10.10|PF13310|PIRSF015268 RSDT_RS04115 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013216|IPR029063 Methyltransferase type 11|S-adenosyl-L-methionine-dependent methyltransferase GO:0008152|GO:0008168 G3DSA:3.40.50.150|PF08241|SSF53335 RSDT_RS04125 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR012336 Thioredoxin-like fold G3DSA:3.40.30.10|PF13462|SSF52833 RSDT_RS04130 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005019|IPR011257 DNA glycosylase|Methyladenine glycosylase GO:0003824|GO:0006281|GO:0006284|GO:0008725 G3DSA:1.10.340.30|PF03352|SSF48150 RSDT_RS04150 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003141|IPR004013|IPR016195 PHP domain|Polymerase/histidinol phosphatase, N-terminal|Polymerase/histidinol phosphatase-like GO:0003824 G3DSA:3.20.20.140|PF02811|SM00481|SSF89550 RSDT_RS04155 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007016 O-antigen ligase-related PF04932 RSDT_RS04165 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011322|IPR013115|IPR013820|IPR015867|IPR018198|IPR020621 ATP phosphoribosyltransferase HisG, long form|ATP phosphoribosyltransferase, catalytic domain|ATP phosphoribosyltransferase, conserved site|Histidine biosynthesis HisG, C-terminal|Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 G3DSA:3.30.70.120|G3DSA:3.40.190.10|MF_00079|PF01634|PF08029|PS01316|SSF53850|SSF54913|TIGR00070|TIGR03455 RSDT_RS04170 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002496|IPR026660 Phosphoribosyl-AMP cyclohydrolase|Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 MF_01021|PD002610|PF01502|SSF141734 RSDT_RS04175 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002637|IPR020922|IPR029001 Ham1-like protein|Inosine triphosphate pyrophosphatase-like|dITP/XTP pyrophosphatase GO:0009143|GO:0017111|GO:0047429 G3DSA:3.90.950.10|MF_01405|PF01725|SSF52972|TIGR00042 RSDT_RS04180 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006439|IPR023198|IPR023214 HAD hydrolase, subfamily IA|HAD-like domain|Phosphoglycolate phosphatase, domain 2 GO:0008152|GO:0016787 G3DSA:1.10.150.240|G3DSA:3.40.50.1000|PF13419|PR00413|SSF56784|TIGR01549 RSDT_RS04185 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 PF05818 RSDT_RS04195 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003601|IPR003602|IPR005733|IPR006171|IPR013497|IPR013498|IPR013825|IPR023405|IPR023406|IPR028612 DNA topoisomerase I, bacterial-type|DNA topoisomerase I, type IA|DNA topoisomerase, type IA, DNA-binding domain|DNA topoisomerase, type IA, active site|DNA topoisomerase, type IA, central|DNA topoisomerase, type IA, central region, subdomain 2|DNA topoisomerase, type IA, core domain|DNA topoisomerase, type IA, domain 2|DNA topoisomerase, type IA, zn finger|TOPRIM domain GO:0003677|GO:0003916|GO:0003917|GO:0005694|GO:0006265 G3DSA:1.10.460.10|G3DSA:2.70.20.10|G3DSA:3.30.65.10|G3DSA:3.40.50.140|MF_00952|PF01131|PF01396|PF01751|PR00417|PS00396|SM00436|SM00437|SM00493|SSF56712|SSF57783|TIGR01051 RSDT_RS04200 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001816|IPR009060|IPR014039|IPR018101 Translation elongation factor EFTs/EF1B|Translation elongation factor EFTs/EF1B, dimerisation|Translation elongation factor Ts, conserved site|UBA-like GO:0003746|GO:0005515|GO:0005622|GO:0006414 G3DSA:1.10.8.10|G3DSA:3.30.479.20|MF_00050|PF00889|PS01126|SSF46934|SSF54713|TIGR00116 RSDT_RS04205 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001865|IPR005706|IPR018130|IPR023591 Ribosomal protein S2|Ribosomal protein S2, bacteria/mitochondria/plastid|Ribosomal protein S2, conserved site|Ribosomal protein S2, flavodoxin-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.40.50.10490|MF_00291_B|PF00318|PR00395|PS00962|SSF52313|TIGR01011 RSDT_RS04210 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003700|IPR015813 Ketopantoate hydroxymethyltransferase|Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824|GO:0003864|GO:0015940 G3DSA:3.20.20.60|MF_00156|PF02548|PIRSF000388|SSF51621|TIGR00222 RSDT_RS04215 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005925|IPR006035|IPR020855 Agmatinase-related|Ureohydrolase|Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 G3DSA:3.40.800.10|PF00491|PIRSF036979|PS01053|SSF52768|TIGR01230 RSDT_RS04220 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000445|IPR003265|IPR004036|IPR005759|IPR011257|IPR023170 DNA glycosylase|Endonuclease III|Endonuclease III-like, conserved site-2|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain GO:0003677|GO:0003824|GO:0003906|GO:0006281|GO:0006284 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|MF_00942|PF00633|PF00730|PIRSF001435|PS01155|SM00478|SSF48150|TIGR01083 RSDT_RS04225 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002813|IPR016117 ArgJ-like domain|Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 G3DSA:3.60.70.12|MF_01106|PD004193|PF01960|SSF56266|TIGR00120 RSDT_RS04230 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000640|IPR000795|IPR004161|IPR004540|IPR005225|IPR005517|IPR009000|IPR014721|IPR020568|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFG/EF2|Translation elongation factor EFG/EF2, domain IV|Translation elongation factor EFTu-like, domain 2|Translation protein, beta-barrel domain GO:0003746|GO:0003924|GO:0005525|GO:0005622|GO:0006414 G3DSA:2.40.30.10|G3DSA:3.30.230.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00054_B|PF00009|PF00679|PF03144|PF03764|PF14492|PR00315|PS00301|SM00838|SM00889|SSF50447|SSF52540|SSF54211|SSF54980|TIGR00231|TIGR00484 RSDT_RS04235 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000235|IPR005717|IPR020606|IPR023798 Ribosomal protein S5/S7|Ribosomal protein S7 domain|Ribosomal protein S7, bacterial/organellar-type|Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412|GO:0015935 G3DSA:1.10.455.10|MF_00480_B|PF00177|PIRSF002122|PS00052|SSF47973|TIGR01029 RSDT_RS04240 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005679|IPR006032|IPR012340 Nucleic acid-binding, OB-fold|Ribosomal protein S12, bacterial-type|Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015935 G3DSA:2.40.50.140|MF_00403_B|PF00164|PIRSF002133|PR01034|PS00055|SSF50249|TIGR00981 RSDT_RS04265 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000305 GIY-YIG nuclease superfamily G3DSA:3.40.1440.10|PF01541|SSF82771 RSDT_RS04270 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001667|IPR003156|IPR004610 Bacterial RecJ exonuclease|DDH domain|DHHA1 domain GO:0003676|GO:0006281|GO:0006310|GO:0008409 G3DSA:3.90.1640.10|PF01368|PF02272|SSF64182|TIGR00644 RSDT_RS04280 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001754|IPR011060|IPR013785|IPR014732|IPR018089 Aldolase-type TIM barrel|Orotidine 5'-phosphate decarboxylase|Orotidine 5'-phosphate decarboxylase domain|Orotidine 5'-phosphate decarboxylase, active site|Ribulose-phosphate binding barrel GO:0003824|GO:0004590|GO:0006207|GO:0008152|GO:0044205 G3DSA:3.20.20.70|MF_01200_B|PF00215|PS00156|SM00934|SSF51366|TIGR01740 RSDT_RS04285 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008145|IPR017665|IPR020590|IPR027417 Guanylate kinase|Guanylate kinase, conserved site|Guanylate kinase/L-type calcium channel beta subunit|P-loop containing nucleoside triphosphate hydrolase GO:0004385|GO:0006163 G3DSA:3.30.63.10|G3DSA:3.40.50.300|MF_00328|PF00625|PS00856|SM00072|SSF52540|TIGR03263 RSDT_RS04290 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007169 Uncharacterised protein family UPF0296 MF_01503|PD063023|PF04025 RSDT_RS04295 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005229|IPR013527|IPR013551 Conserved hypothetical protein CHP00255|Domain of unknown function DUF1732|YicC-like, N-terminal PF03755|PF08340|TIGR00255 RSDT_RS04300 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain G3DSA:2.20.28.10|PF09723|SM00834|SSF57802|TIGR02605 RSDT_RS04305 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003010|IPR003694|IPR014445|IPR014729|IPR022310 Carbon-nitrogen hydrolase|Glutamine-dependent NAD(+) synthetase|NAD(+) synthetase|NAD/GMP synthase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003952|GO:0005524|GO:0006807|GO:0009435|GO:0016810 G3DSA:3.40.50.620|G3DSA:3.60.110.10|PF00795|PF02540|PIRSF006630|SSF52402|SSF56317|TIGR00552 RSDT_RS04335 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003607|IPR004087|IPR004088|IPR006674|IPR006675|IPR015946|IPR017705|IPR022711|IPR028987 F-type ATP synthase subunit B-like, membrane domain|HD domain|HD/PDEase domain|HDIG domain|K Homology domain|K Homology domain, type 1|K homology domain-like, alpha/beta|Ribonuclease Y|Ribonuclease Y, N-terminal GO:0003676|GO:0003723|GO:0006402|GO:0016020 G3DSA:1.10.3210.10|G3DSA:1.20.5.620|G3DSA:3.30.300.20|MF_00335|PF00013|PF01966|PF12072|SM00322|SM00471|SSF109604|SSF54791|TIGR00277|TIGR03319 RSDT_RS04345 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007838 Cell division protein ZapA-like PF05164|SSF102829 RSDT_RS04350 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 G3DSA:1.10.287.540|G3DSA:1.20.5.370|PF06005 RSDT_RS04355 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001451|IPR005882|IPR011004|IPR018357|IPR025877|IPR029044 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase|Hexapeptide repeat|Hexapeptide transferase, conserved site|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases|Trimeric LpxA-like GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0016740|GO:0019134 G3DSA:2.160.10.10|G3DSA:3.90.550.10|MF_01631|PF00132|PF12804|PF14602|PS00101|SSF51161|SSF53448|TIGR01173 RSDT_RS04360 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR017730|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATPase, AAA-type, core|Chaperonin ClpB|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0005737|GO:0009408|GO:0016485|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR03346 RSDT_RS04365 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001623|IPR002939|IPR008971|IPR018253 Chaperone DnaJ, C-terminal|DnaJ domain|DnaJ domain, conserved site|HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 G3DSA:1.10.287.110|G3DSA:1.20.5.460|G3DSA:2.60.260.20|PF00226|PF01556|PR00625|PS00636|SM00271|SSF46565|SSF49493 RSDT_RS04380 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 G3DSA:1.10.287.470|G3DSA:2.40.50.100|PF13533|SSF111369|TIGR01730 RSDT_RS04385 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 RSDT_RS04390 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001036|IPR027463 Acriflavin resistance protein|Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains GO:0005215|GO:0006810|GO:0016020 G3DSA:1.20.1640.10|G3DSA:3.30.2090.10|G3DSA:3.30.70.1430|PF00873|PR00702|SSF82693|SSF82714|SSF82866 RSDT_RS04395 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 PF02511|SSF69796|TIGR02170 RSDT_RS04405 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006109|IPR006168|IPR008927|IPR011128|IPR013328|IPR016040 6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, domain 2|Glycerol-3-phosphate dehydrogenase, NAD-dependent|Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal|Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal|NAD(P)-binding domain GO:0004367|GO:0005975|GO:0006072|GO:0009331|GO:0016491|GO:0016616|GO:0046168|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|MF_00394|PF01210|PF07479|PIRSF000114|PR00077|PS00957|SSF48179|SSF51735 RSDT_RS04410 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 G3DSA:3.30.70.100|PF00403|SSF55008 RSDT_RS04425 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002099|IPR003594|IPR013507|IPR014721|IPR014762|IPR014790|IPR020568|IPR020667 DNA mismatch repair protein family|DNA mismatch repair protein, C-terminal|DNA mismatch repair protein, MutL|DNA mismatch repair, conserved site|Histidine kinase-like ATPase, C-terminal domain|MutL, C-terminal, dimerisation|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0005524|GO:0006298|GO:0030983 G3DSA:3.30.230.10|G3DSA:3.30.565.10|MF_00149|PF01119|PF08676|PF13589|PS00058|SM00853|SM01340|SSF118116|SSF54211|SSF55874|TIGR00585 RSDT_RS04440 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000629|IPR001650|IPR011545|IPR014001|IPR027417 ATP-dependent RNA helicase DEAD-box, conserved site|DEAD/DEAH box helicase domain|Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003676|GO:0005524 G3DSA:3.40.50.300|PF00270|PF00271|PS00039|SM00487|SM00490|SSF52540 RSDT_RS04445 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 G3DSA:3.40.50.2300|PF02608 RSDT_RS04450 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000640|IPR000795|IPR005225|IPR006298|IPR009000|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor EFG, domain V-like|GTP-binding protein TypA|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation protein, beta-barrel domain GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:2.40.50.250|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|PF00009|PF00679|PR00315|PS00301|SSF50447|SSF52540|SSF54980|TIGR00231|TIGR01394 RSDT_RS04455 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005479|IPR005481|IPR005482|IPR011054|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|Biotin carboxylase, C-terminal|Biotin carboxylase-like, N-terminal domain|Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0005524 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|PF00289|PF02785|PF02786|PS00867|SM00878|SSF51246|SSF52440|SSF56059 RSDT_RS04460 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001095|IPR029045 Acetyl-CoA carboxylase, alpha subunit|ClpP/crotonase-like domain GO:0003989|GO:0006633|GO:0009317 G3DSA:3.90.226.10|PF03255|PR01069|SSF52096 RSDT_RS04465 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:2.40.50.100 RSDT_RS04475 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000424|IPR011344|IPR012340 Nucleic acid-binding, OB-fold|Primosome PriB/single-strand DNA-binding|Single-stranded DNA-binding protein GO:0003697|GO:0006260 G3DSA:2.40.50.140|MF_00984|PF00436|PIRSF002070|SSF50249|TIGR00621 RSDT_RS04480 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002650|IPR014729|IPR015947|IPR024951|IPR025980 ATP-sulfurylase PUA-like domain|PUA-like domain|Rossmann-like alpha/beta/alpha sandwich fold|Sulphate adenylyltransferase|Sulphate adenylyltransferase catalytic domain GO:0000103|GO:0004781 G3DSA:3.10.400.10|G3DSA:3.40.50.620|PF01747|PF14306|SSF52374|SSF88697|TIGR00339 RSDT_RS04490 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005546 Autotransporter beta-domain G3DSA:2.40.128.130|PF03797|SM00869|SSF103515 RSDT_RS04495 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR032712 AsmA-like, C-terminal PF13502 RSDT_RS04510 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000914|IPR030678 Peptide/nickel binding protein, MppA-type|Solute-binding protein family 5 domain GO:0043190|GO:0055085 G3DSA:3.10.105.10|G3DSA:3.40.190.10|G3DSA:3.90.76.10|PF00496|PIRSF002741|SSF53850 RSDT_RS04515 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000330|IPR001650|IPR013663|IPR014001|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase, SWF/SNF/SWI type, bacterial|P-loop containing nucleoside triphosphate hydrolase|SNF2-related, N-terminal domain GO:0005524 G3DSA:3.40.50.10810|G3DSA:3.40.50.300|PF00176|PF00271|PF08455|SM00487|SM00490|SSF52540 RSDT_RS04520 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006597|IPR011990|IPR019734|IPR029787 Nucleotide cyclase|Sel1-like repeat|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|G3DSA:3.30.70.270|PF13176|SM00028|SM00671|SSF48452|SSF55073 RSDT_RS04525 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR014017|IPR016195|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Polymerase/histidinol phosphatase-like|UvrD-like DNA helicase, C-terminal GO:0003824|GO:0005524|GO:0016787 G3DSA:3.20.20.140|G3DSA:3.40.50.300|PF13245|PF13361|SSF52540|SSF89550 RSDT_RS04530 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001539|IPR013785 Aldolase-type TIM barrel|Peptidase U32 GO:0003824|GO:0006508|GO:0008233 G3DSA:3.20.20.70|PF01136 RSDT_RS04535 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008089|IPR016040 NAD(P)-binding domain|Nucleotide sugar epimerase GO:0005975|GO:0016857 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PR01713|SSF51735 RSDT_RS04540 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 RSDT_RS04545 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001048|IPR001341|IPR002912|IPR005260|IPR018042|IPR027795 ACT domain|Aspartate kinase domain|Aspartate kinase, conserved site|Aspartate kinase, monofunctional class|Aspartate/glutamate/uridylate kinase|GATS-like ACT domain GO:0004072|GO:0008652|GO:0009089 G3DSA:3.30.70.260|G3DSA:3.40.1160.10|PF00696|PF01842|PF13840|PIRSF000726|PS00324|SSF53633|SSF55021|TIGR00656|TIGR00657 RSDT_RS04550 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000587|IPR000994|IPR028980|IPR029149 Creatinase, N-terminal|Creatinase/Aminopeptidase P, N-terminal|Creatinase/Aminopeptidase P/Spt16, N-terminal|Peptidase M24 GO:0016787 G3DSA:3.40.350.10|G3DSA:3.90.230.10|PF00557|PF01321|SSF53092|SSF55920 RSDT_RS04555 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000185|IPR004027|IPR011115|IPR011116|IPR011130|IPR020937|IPR027417 P-loop containing nucleoside triphosphate hydrolase|Protein translocase subunit SecA|SEC-C motif|SecA DEAD-like, N-terminal|SecA Wing/Scaffold|SecA conserved site|SecA preprotein, cross-linking domain GO:0005524|GO:0006605|GO:0006886|GO:0016020|GO:0017038 G3DSA:1.10.3060.10|G3DSA:3.40.50.300|MF_01382|PF01043|PF02810|PF07516|PF07517|PR00906|PS01312|SM00957|SM00958|SSF52540|SSF81767|SSF81886|TIGR00963 RSDT_RS04560 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002197|IPR009057 DNA binding HTH domain, Fis-type|Homeobox domain-like GO:0003677|GO:0043565 G3DSA:1.10.10.60|PF02954|SSF46689 RSDT_RS04565 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR012340 Nucleic acid-binding, OB-fold PF00773|SM00955|SSF50249 RSDT_RS04570 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 MF_01043|PF02660|SM01207|TIGR00023 RSDT_RS04575 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001926|IPR004450 Threonine synthase-like|Tryptophan synthase beta subunit-like PLP-dependent enzyme G3DSA:3.40.50.1100|PF00291|SSF53686|TIGR00260 RSDT_RS04595 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 RSDT_RS04600 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025166 Integrase, DNA-binding domain PF13356 RSDT_RS04610 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003828 Probable epoxyqueuosine reductase QueH PF02677 RSDT_RS04615 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005665|IPR022645|IPR022646|IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site|Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 G3DSA:1.20.1640.10|MF_01464_B|PF02355|PF07549|PR01755|SSF82866|TIGR00966 RSDT_RS04620 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001036|IPR005791|IPR022645|IPR022646|IPR022813 Acriflavin resistance protein|Protein translocase subunit SecD|Protein-export membrane protein SecD/SecF, archaeal and bacterial|Protein-export membrane protein SecD/SecF, bacterial|Protein-export membrane protein SecD/SecF/SecDF, conserved site GO:0005215|GO:0006810|GO:0006886|GO:0015450|GO:0016020 G3DSA:1.20.1640.10|MF_01463_B|PF02355|PF07549|PR00702|SSF82866|TIGR00916|TIGR01129 RSDT_RS04625 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003849 Preprotein translocase YajC PF02699|PR01853|SM01323|TIGR00739 RSDT_RS04630 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003029|IPR004659|IPR012340|IPR019307|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding protein AU-1/Ribonuclease E/G|Ribonuclease E/G|S1 domain GO:0003676|GO:0003723|GO:0004540|GO:0006396 G3DSA:2.40.50.140|PF00575|PF10150|SM00316|SSF50249|TIGR00757 RSDT_RS04635 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000642|IPR003593|IPR003959|IPR003960|IPR005936|IPR011546|IPR027417 AAA+ ATPase domain|ATPase, AAA-type, conserved site|ATPase, AAA-type, core|P-loop containing nucleoside triphosphate hydrolase|Peptidase M41|Peptidase M41, FtsH extracellular|Peptidase, FtsH GO:0004222|GO:0005524|GO:0006508|GO:0008270|GO:0016020|GO:0016021 G3DSA:1.10.8.60|G3DSA:3.40.50.300|MF_01458|PF00004|PF01434|PF06480|PS00674|SM00382|SSF140990|SSF52540|TIGR01241 RSDT_RS04640 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000489|IPR006390|IPR011005 Dihydropteroate synthase|Dihydropteroate synthase-like|Pterin-binding domain GO:0004156|GO:0009396|GO:0042558|GO:0044237 G3DSA:3.20.20.20|PF00809|PS00793|SSF51717|TIGR01496 RSDT_RS04645 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003390|IPR014046|IPR034701 DNA integrity scanning protein, DisA, N-terminal|Diadenylate cyclase|Diadenylate cyclase CdaA GO:0004016|GO:0006171 G3DSA:3.40.1700.10|MF_01499|PF02457|PIRSF004793|SSF143597|TIGR00159 RSDT_RS04655 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005841|IPR005843|IPR005844|IPR005845|IPR005846|IPR006352|IPR016055|IPR016066 Alpha-D-phosphohexomutase superfamily|Alpha-D-phosphohexomutase, C-terminal|Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III|Alpha-D-phosphohexomutase, alpha/beta/alpha domain I|Alpha-D-phosphohexomutase, alpha/beta/alpha domain II|Alpha-D-phosphohexomutase, alpha/beta/alpha domain III|Alpha-D-phosphohexomutase, conserved site|Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966|GO:0016868|GO:0071704 G3DSA:3.30.310.50|G3DSA:3.40.120.10|MF_01554_B|PF00408|PF02878|PF02879|PF02880|PR00509|PS00710|SSF53738|SSF55957|TIGR01455 RSDT_RS04660 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|SM00422|SSF46955 RSDT_RS04665 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013694 VIT domain PF08487 RSDT_RS04675 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002035 von Willebrand factor, type A G3DSA:3.40.50.410|SSF53300 RSDT_RS04680 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001279 Metallo-beta-lactamase G3DSA:3.60.15.10|PF00753|SM00849|SSF56281 RSDT_RS04685 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005025|IPR029039 Flavoprotein-like domain|NADPH-dependent FMN reductase-like GO:0016491 G3DSA:3.40.50.360|PF03358|SSF52218 RSDT_RS04690 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000836|IPR029057 Phosphoribosyltransferase domain|Phosphoribosyltransferase-like GO:0009116 G3DSA:3.40.50.2020|PF00156|SSF53271 RSDT_RS04695 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR019613 Protein of unknown function DUF4198 PF10670 RSDT_RS04700 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007379|IPR032710 NTF2-like domain|Tim44-like domain G3DSA:3.10.450.50|PF04280|SM00978|SSF54427 RSDT_RS04705 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003736|IPR006683|IPR029069 HotDog domain|Phenylacetic acid degradation-related domain|Thioesterase domain G3DSA:3.10.129.10|PF03061|SSF54637|TIGR00369 RSDT_RS04710 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017695|IPR023753 FAD/NAD(P)-binding domain|Selenium-dependent molybdenum hydroxylase system protein, YqeB family GO:0016491|GO:0055114 G3DSA:3.50.50.60|TIGR03309 RSDT_RS04720 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000674|IPR001041|IPR002888|IPR006058|IPR008274|IPR012675|IPR017697 2Fe-2S ferredoxin, iron-sulphur binding site|2Fe-2S ferredoxin-type iron-sulfur binding domain|Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead|Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding|Beta-grasp domain|Selenium-dependent xanthine dehydrogenase|[2Fe-2S]-binding GO:0009055|GO:0016491|GO:0046872|GO:0051536|GO:0051537|GO:0055114 G3DSA:1.10.150.120|G3DSA:3.10.20.30|G3DSA:3.30.365.10|G3DSA:3.90.1170.50|PF00111|PF01315|PF01799|PF02738|PS00197|SM01008|SSF47741|SSF54292|SSF54665|SSF56003|TIGR03311 RSDT_RS04725 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006042|IPR006043 Xanthine/uracil permease|Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 PF00860|PS01116 RSDT_RS04730 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009051|IPR013785|IPR017900|IPR023753|IPR028261 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Aldolase-type TIM barrel|Alpha-helical ferredoxin|Dihydroprymidine dehydrogenase domain II|FAD/NAD(P)-binding domain GO:0003824|GO:0016491|GO:0051536|GO:0055114 G3DSA:1.10.1060.10|G3DSA:3.20.20.70|G3DSA:3.50.50.60|PF13450|PF14691|PS00198|SSF46548|SSF51395|SSF51971 RSDT_RS04735 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 RSDT_RS04740 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006680|IPR011059|IPR011778|IPR032466 Amidohydrolase-related|Hydantoinase/dihydropyrimidinase|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0005737|GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556|TIGR02033 RSDT_RS04745 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002082|IPR006130|IPR006131|IPR006132|IPR017702 Aspartate carbamoyltransferase|Aspartate/ornithine carbamoyltransferase|Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain|Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding|Putative carbamoyltransferase YgeW GO:0004070|GO:0006207|GO:0006520|GO:0016597|GO:0016743 G3DSA:3.40.50.1370|PF00185|PF02729|PR00100|PR00101|SSF53671|TIGR03316 RSDT_RS04755 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001048|IPR003964 Aspartate/glutamate/uridylate kinase|Carbamate kinase GO:0006525|GO:0008804 G3DSA:3.40.1160.10|PF00696|PIRSF000723|PR01469|SSF53633 RSDT_RS04760 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001261|IPR002933|IPR011650|IPR017706 ArgE/DapE/ACY1/CPG2/YscS, conserved site|Peptidase M20|Peptidase M20, dimerisation domain|Peptidase M20/DapE, YgeY GO:0006508|GO:0008152|GO:0008237|GO:0016787 G3DSA:3.40.630.10|PF01546|PF07687|PS00758|SSF53187|SSF55031|TIGR03526 RSDT_RS04765 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001926|IPR010081|IPR019871 Diaminopropionate ammonia-lyase|Diaminopropionate ammonia-lyase, subgroup|Tryptophan synthase beta subunit-like PLP-dependent enzyme GO:0008838|GO:0030170 G3DSA:3.40.50.1100|PF00291|SSF53686|TIGR01747|TIGR03528 RSDT_RS04770 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006056|IPR006175|IPR013813|IPR019897 Endoribonuclease L-PSP/chorismate mutase-like|RidA family|RidA, conserved site|YjgF/YER057c/UK114 family G3DSA:3.30.1330.40|PF01042|PS01094|SSF55298|TIGR00004 RSDT_RS04785 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:2.20.25.10|SSF158997 RSDT_RS04790 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003697|IPR029001 Inosine triphosphate pyrophosphatase-like|Maf-like protein GO:0047429 G3DSA:3.90.950.10|MF_00528|PF02545|PIRSF006305|SSF52972|TIGR00172 RSDT_RS04810 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:3.40.50.300 RSDT_RS04815 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001645|IPR004101|IPR013221 Folylpolyglutamate synthetase|Mur ligase, C-terminal|Mur ligase, central GO:0004326|GO:0005524|GO:0009058|GO:0009396|GO:0016874 G3DSA:3.40.1190.10|G3DSA:3.90.190.20|PF02875|PF08245|PIRSF001563|SSF53244|SSF53623|TIGR01499 RSDT_RS04820 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003442|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 G3DSA:3.40.50.300|PF02367|SSF52540 RSDT_RS04825 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000631|IPR004443|IPR017953|IPR029056|IPR030677 ATP-dependent (S)-NAD(P)H-hydrate dehydratase|Bifunctional NAD(P)H-hydrate repair enzyme Nnr|Carbohydrate kinase, predicted, conserved site|Ribokinase-like|YjeF N-terminal domain GO:0052855 G3DSA:3.40.1190.20|G3DSA:3.40.50.10260|MF_01965|MF_01966|PF01256|PF03853|PIRSF017184|PS01050|SSF53613|SSF64153|TIGR00196|TIGR00197 RSDT_RS04830 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002582|IPR004568|IPR008278 4'-phosphopantetheinyl transferase superfamily|Holo-[acyl carrier protein] synthase|Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 G3DSA:3.90.470.20|MF_00101|PD004282|PF01648|SSF56214|TIGR00516|TIGR00556 RSDT_RS04840 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001821|IPR006137|IPR019546|IPR027394 Cytochrome-c3 hydrogenase, C-terminal|NADH:ubiquinone oxidoreductase-like, 20kDa subunit|Twin-arginine translocation pathway, signal sequence, bacterial/archaeal|[NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 G3DSA:3.40.50.700|G3DSA:4.10.480.10|PF01058|PF14720|PIRSF000310|PR00614|SSF56770|TIGR00391|TIGR01409 RSDT_RS04845 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001501|IPR018194|IPR029014 NiFe hydrogenase-like|Nickel-dependent hydrogenase, large subunit|Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 G3DSA:1.10.645.10|PF00374|PS00507|PS00508|SSF56762 RSDT_RS04850 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003251|IPR009078|IPR012347 Ferritin-like superfamily|Ferritin-related|Rubrerythrin GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1260.10|PF02915|SSF47240|SSF57802 RSDT_RS04855 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR011527|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter type 1, transmembrane domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0006810|GO:0016021|GO:0016887|GO:0042626|GO:0055085 G3DSA:1.20.1560.10|G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540|SSF90123 RSDT_RS04860 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025993|IPR029044 Ceramide glucosyltransferase|Nucleotide-diphospho-sugar transferases GO:0016757 G3DSA:3.90.550.10|PF13506|SSF53448 RSDT_RS04870 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001296|IPR028098 Glycosyl transferase, family 1|Glycosyltransferase subfamily 4-like, N-terminal domain G3DSA:3.40.50.2000|PF00534|PF13439|SSF53756 RSDT_RS04875 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007404 LexA-binding, inner membrane-associated putative hydrolase PF04307 RSDT_RS04885 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003817|IPR033175 Phosphatidylserine decarboxylase, archaeal-type|Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 MF_00664|PF02666|TIGR00164 RSDT_RS04890 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000462|IPR004533 CDP-alcohol phosphatidyltransferase|CDP-diacylglycerol--serine O-phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PF01066|PS00379|TIGR00473 RSDT_RS04895 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000891|IPR002034|IPR005671|IPR013709|IPR013785 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain|2-isopropylmalate synthase, bacterial-type|Aldolase-type TIM barrel|Alpha-isopropylmalate/homocitrate synthase, conserved site|Pyruvate carboxyltransferase GO:0003824|GO:0003852|GO:0009098|GO:0019752|GO:0046912 G3DSA:3.20.20.70|MF_01025|PF00682|PF08502|PS00815|PS00816|SM00917|SSF110921|SSF51569|TIGR00973 RSDT_RS04900 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001030|IPR006251|IPR011823|IPR011826|IPR015931|IPR015932|IPR018136 3-isopropylmalate dehydratase, large subunit, bacteria|Aconitase family, 4Fe-4S cluster binding site|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3|Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2|Homoaconitase/3-isopropylmalate dehydratase, large subunit|Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0008152|GO:0008652|GO:0009098|GO:0016836|GO:0051539 G3DSA:3.30.499.10|G3DSA:3.40.1060.10|MF_01027|PF00330|PR00415|PS00450|PS01244|SSF53732|TIGR01343|TIGR02083|TIGR02086 RSDT_RS04905 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000573|IPR011827|IPR015928 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain|Aconitase/3-isopropylmalate dehydratase, swivel|Hydrolyase LeuD/HacB/DmdB GO:0008152|GO:0016836 G3DSA:3.20.19.10|MF_01032|PF00694|SSF52016|TIGR02087 RSDT_RS04910 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004429|IPR019818|IPR024084 Isocitrate/isopropylmalate dehydrogenase, conserved site|Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase-like domain GO:0000287|GO:0003862|GO:0005737|GO:0009098|GO:0016616|GO:0051287|GO:0055114 G3DSA:3.40.718.10|MF_01033|PF00180|PS00470|SM01329|SSF53659|TIGR00169 RSDT_RS04915 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 RSDT_RS04920 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001576|IPR015824 Phosphoglycerate kinase|Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 G3DSA:3.40.50.1260|MF_00145|PF00162|PIRSF000724|PR00477|SSF53748 RSDT_RS04925 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005474|IPR005475|IPR005478|IPR009014|IPR020826|IPR029061|IPR033248 Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II|Transketolase binding site|Transketolase, C-terminal domain|Transketolase, N-terminal|Transketolase, bacterial-like|Transketolase-like, pyrimidine-binding domain GO:0003824|GO:0004802|GO:0008152 G3DSA:3.40.50.920|G3DSA:3.40.50.970|PF00456|PF02779|PF02780|PS00801|PS00802|SM00861|SSF52518|SSF52922|TIGR00232 RSDT_RS04930 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000056|IPR011060|IPR013785|IPR026019 Aldolase-type TIM barrel|Ribulose-phosphate 3-epimerase|Ribulose-phosphate 3-epimerase-like|Ribulose-phosphate binding barrel GO:0003824|GO:0004750|GO:0005975|GO:0006098|GO:0008152|GO:0016857 G3DSA:3.20.20.70|PF00834|PIRSF001461|PS01085|SSF51366|TIGR01163 RSDT_RS04935 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000551|IPR009061 MerR-type HTH domain|Putative DNA-binding domain GO:0003677|GO:0006355 G3DSA:1.10.1660.10|PF13411|SM00422|SSF46955 RSDT_RS04940 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002547|IPR004532|IPR005121|IPR005146|IPR005147|IPR009061|IPR012340|IPR020825 B3/B4 tRNA-binding domain|Ferrodoxin-fold anticodon-binding domain|Nucleic acid-binding, OB-fold|Phenylalanine-tRNA ligase, class IIc, beta subunit|Phenylalanyl-tRNA synthetase, B3/B4|Putative DNA-binding domain|tRNA synthetase, B5-domain|tRNA-binding domain GO:0000049|GO:0000287|GO:0003723|GO:0004826|GO:0005524|GO:0005737|GO:0006432 G3DSA:2.40.50.140|G3DSA:3.30.56.10|G3DSA:3.30.70.380|G3DSA:3.30.930.10|G3DSA:3.50.40.10|MF_00283|PF01588|PF03147|PF03483|PF03484|SM00873|SM00874|SM00896|SSF46955|SSF50249|SSF54991|SSF55681|SSF56037|TIGR00472 RSDT_RS04950 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002319|IPR004188|IPR004529|IPR010978|IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial|Phenylalanine-tRNA ligase, class II, N-terminal|Phenylalanyl-tRNA synthetase|Phenylalanyl-tRNA synthetase, class IIc, alpha subunit|tRNA-binding arm GO:0000049|GO:0000166|GO:0004812|GO:0004826|GO:0005524|GO:0005737|GO:0006432|GO:0043039 G3DSA:3.30.930.10|MF_00281|PF01409|PF02912|SSF46589|SSF55681|TIGR00468 RSDT_RS04955 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005813|IPR035566 Ribosomal protein L20|Ribosomal protein L20 C-terminal domain GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:1.10.1900.20|MF_00382|PD002389|PF00453|PR00062|PS00937|SSF74731|TIGR01032 RSDT_RS04960 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001706|IPR018265|IPR021137 Ribosomal protein L35|Ribosomal protein L35, conserved site|Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00514|PF01632|PR00064|PS00936|SSF143034|TIGR00001 RSDT_RS04965 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001288|IPR019813|IPR019814|IPR019815 Translation initiation factor 3|Translation initiation factor 3, C-terminal|Translation initiation factor 3, N-terminal|Translation initiation factor 3, conserved site GO:0003743|GO:0006413 G3DSA:3.10.20.80|G3DSA:3.30.110.10|MF_00080|PF00707|PF05198|PS00938|SSF54364|SSF55200|TIGR00168 RSDT_RS04970 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002314|IPR002320|IPR004154|IPR012947|IPR018163 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)|Anticodon-binding|Threonine-tRNA ligase, class IIa|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166|GO:0004812|GO:0004829|GO:0005524|GO:0005737|GO:0006418|GO:0006435|GO:0016876|GO:0043039 G3DSA:3.30.930.10|G3DSA:3.30.980.10|G3DSA:3.40.50.800|MF_00184|PF00587|PF03129|PF07973|PR01047|SM00863|SSF52954|SSF55186|SSF55681|TIGR00418 RSDT_RS04980 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR016772 Uncharacterised conserved protein UCP020408 PF10087 RSDT_RS04985 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 MF_00719|PF02654 RSDT_RS05000 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002104|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 G3DSA:1.10.443.10|PF00589|SSF56349 RSDT_RS05015 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR029063 S-adenosyl-L-methionine-dependent methyltransferase G3DSA:3.40.50.150|SSF53335 RSDT_RS05020 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain PF14361 RSDT_RS05025 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR023234 NarG-like domain G3DSA:1.20.950.20|PF02665|SSF103501 RSDT_RS05030 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004017|IPR009051|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Cysteine-rich domain GO:0051536 G3DSA:3.30.70.20|PF02754|PF13183|PS00198|SSF46548 RSDT_RS05035 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011031 Multihaem cytochrome G3DSA:3.90.10.10|SSF48695 RSDT_RS05040 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF13247|PS00198|SSF54862 RSDT_RS05045 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005614 NrfD family G3DSA:1.20.1630.10|PF03916 RSDT_RS05050 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001757|IPR008250|IPR018303|IPR023214|IPR023298|IPR023299|IPR027256 HAD-like domain|P-type ATPase|P-type ATPase, transmembrane domain|P-type ATPase, A domain|P-type ATPase, cytoplasmic domain N|P-type ATPase, phosphorylation site|P-type ATPase, subfamily IB GO:0000166|GO:0006812|GO:0016021|GO:0019829 G3DSA:1.20.1110.10|G3DSA:3.40.1110.10|PF00122|PF00702|PR00119|PR00120|PS00154|SSF56784|SSF81653|SSF81665|TIGR01494|TIGR01512|TIGR01525 RSDT_RS05055 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001845|IPR011991|IPR018334 ArsR-type transcription regulator, HTH motif|HTH ArsR-type DNA-binding domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355 G3DSA:1.10.10.10|PF01022|PR00778|PS00846|SM00418|SSF46785 RSDT_RS05060 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006674 HD domain G3DSA:1.10.3090.10|PF01966|SSF81891 RSDT_RS05065 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002877|IPR029063 Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0008168|GO:0032259 G3DSA:3.40.50.150|PF01728|SSF53335 RSDT_RS05070 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 G3DSA:2.40.50.140|PF03100|SSF82093 RSDT_RS05075 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002541|IPR003567|IPR032523 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein|Cytochrome c-type biogenesis protein CcmF, C-terminal GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PF16327|PR01410 RSDT_RS05080 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS05085 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 PF03379|PR01414 RSDT_RS05090 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002541|IPR003557 Cytochrome c assembly protein|Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004|GO:0020037 PF01578|PR01386 RSDT_RS05095 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR030888 Putative ccm operon protein TIGR04391 RSDT_RS05100 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011990|IPR019734 Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|PF13424|SM00028|SSF48452 RSDT_RS05105 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003594|IPR008207 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 G3DSA:1.20.120.160|G3DSA:3.30.565.10|SSF47226|SSF55874 RSDT_RS05110 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001736|IPR022924|IPR025202|IPR027379 Cardiolipin synthase|Cardiolipin synthase N-terminal|Phospholipase D-like domain|Phospholipase D/Transphosphatidylase GO:0003824|GO:0008808|GO:0016780|GO:0032049 G3DSA:3.30.870.10|PF13091|PF13396|SM00155|SSF56024|TIGR04265 RSDT_RS05115 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:3.10.560.10|G3DSA:3.30.1950.10 RSDT_RS05120 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR032258 17kDa common-antigen outer membrane protein PF16587 RSDT_RS05130 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001478|IPR004447|IPR005151|IPR029045 C-terminal-processing peptidase S41A|ClpP/crotonase-like domain|PDZ domain|Tail specific protease GO:0005515|GO:0006508|GO:0008236 G3DSA:2.30.42.10|G3DSA:3.30.750.44|G3DSA:3.90.226.10|PF03572|PF13180|SM00228|SM00245|SSF50156|SSF52096|TIGR00225 RSDT_RS05135 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000304|IPR008927|IPR016040|IPR028939|IPR029036 6-phosphogluconate dehydrogenase C-terminal domain-like|NAD(P)-binding domain|Pyrroline-5-carboxylate reductase|Pyrroline-5-carboxylate reductase, catalytic, N-terminal|Pyrroline-5-carboxylate reductase, dimerisation domain GO:0004735|GO:0006561|GO:0055114 G3DSA:1.10.3730.10|G3DSA:3.40.50.720|MF_01925|PF03807|PF14748|PIRSF000193|PS00521|SSF48179|SSF51735|TIGR00112 RSDT_RS05140 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR021731 AMIN domain PF11741 RSDT_RS05145 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|SM00935|SSF111384 RSDT_RS05150 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:2.130.10.130|PF13517|SSF69318 RSDT_RS05155 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000115|IPR011054|IPR013815|IPR016185|IPR020559|IPR020560|IPR020561|IPR020562 ATP-grasp fold, subdomain 1|Phosphoribosylglycinamide synthetase|Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain|Phosphoribosylglycinamide synthetase, C-domain|Phosphoribosylglycinamide synthetase, N-terminal|Phosphoribosylglycinamide synthetase, conserved site|Pre-ATP-grasp domain|Rudiment single hybrid motif GO:0003824|GO:0004637|GO:0005524|GO:0009113 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|G3DSA:3.90.600.10|MF_00138|PF01071|PF02843|PF02844|PS00184|SM01209|SM01210|SSF51246|SSF52440|SSF56059|TIGR00877 RSDT_RS05160 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000031|IPR024694|IPR033747 Class I PurE|PurE domain|PurE, prokaryotic type GO:0006189 G3DSA:3.40.50.7700|MF_01929|PF00731|PIRSF001338|SM01001|SSF52255|TIGR01162 RSDT_RS05165 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001173|IPR029044 Glycosyltransferase 2-like|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF00535|SSF53448 RSDT_RS05170 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 PF04138 RSDT_RS05175 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|SSF53383 RSDT_RS05185 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013785|IPR022998|IPR034291 Aldolase-type TIM barrel|Thiamine phosphate synthase|Thiamine phosphate synthase/TenI GO:0003824|GO:0004789|GO:0009228 G3DSA:3.20.20.70|MF_00097|PF02581|SSF51391|TIGR00693 RSDT_RS05190 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006685|IPR010920|IPR011014|IPR011066 LSM domain|Mechanosensitive ion channel MscS|Mechanosensitive ion channel MscS, C-terminal|Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020|GO:0055085 G3DSA:2.30.30.60|G3DSA:3.30.70.100|PF00924|SSF50182|SSF82689|SSF82861 RSDT_RS05195 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR014816|IPR029063 S-adenosyl-L-methionine-dependent methyltransferase|tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 G3DSA:3.40.50.150|PF08704|PIRSF017269|SSF53335 RSDT_RS05200 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001264|IPR001460|IPR012338|IPR023346|IPR031376 Beta-lactamase/transpeptidase-like|Glycosyl transferase, family 51|Lysozyme-like domain|Penicillin-binding protein, OB-like domain|Penicillin-binding protein, transpeptidase GO:0008658 G3DSA:1.10.3810.10|G3DSA:3.40.710.10|PF00905|PF00912|PF17092|SSF53955|SSF56601|TIGR02074 RSDT_RS05205 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007453|IPR025526 DsrC-like domain|Sulphur transfer protein DsrC/TusE G3DSA:1.10.10.370|G3DSA:3.30.1420.10|PF04358|PIRSF006223|SSF69721|TIGR03342 RSDT_RS05215 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000878|IPR003043|IPR006362|IPR014776|IPR014777 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|Uroporphiryn-III C-methyltransferase, conserved site GO:0008152|GO:0008168|GO:0009236|GO:0046026|GO:0055114 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|PF00590|PS00839|SSF53790|TIGR01465 RSDT_RS05220 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000878|IPR006365|IPR012818|IPR014008|IPR014776|IPR014777|IPR029063 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase|Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase|Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit|S-adenosyl-L-methionine-dependent methyltransferase|Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168|GO:0008276|GO:0009236 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|G3DSA:3.40.50.150|PF00590|PF01135|PIRSF036428|SSF53335|SSF53790|TIGR02467|TIGR02469 RSDT_RS05225 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 G3DSA:3.30.2110.10|MF_00787|PF01888|PIRSF026782|SSF111342 RSDT_RS05240 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000277|IPR006235|IPR015421|IPR015422|IPR015424 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme|O-acetylhomoserine/O-acetylserine sulfhydrylase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0006520|GO:0016765|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01053|PIRSF001434|PS00868|SSF53383|TIGR01326 RSDT_RS05250 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS05255 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000515|IPR011867 ABC transporter type 1, transmembrane domain MetI-like|Molybdate ABC transporter, permease protein GO:0006810|GO:0015098|GO:0015689|GO:0016020|GO:0016021 G3DSA:1.10.3720.10|PF00528|SSF161098|TIGR02141 RSDT_RS05260 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 G3DSA:3.40.190.10|PF13531|PIRSF004846|SSF53850|TIGR01256 RSDT_RS05265 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002104|IPR004606|IPR005116|IPR008995|IPR011010|IPR013762 DNA breaking-rejoining enzyme, catalytic core|Integrase, catalytic domain|Integrase-like, catalytic domain|Molybdate/tungstate binding, C-terminal|Molybdenum-pterin binding|Transport-associated OB, type 1 GO:0003677|GO:0006310|GO:0006810|GO:0015074|GO:0030151 G3DSA:1.10.443.10|G3DSA:2.40.50.100|PF00589|PF03459|SSF50331|SSF56349|TIGR00638 RSDT_RS05270 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001792|IPR004421|IPR006070|IPR011125|IPR017945 Acylphosphatase-like domain|Carbamoyltransferase, HypF-type|DHBP synthase RibB-like alpha/beta domain|YrdC-like domain|Zinc finger, HypF-type GO:0003725|GO:0008270|GO:0016743|GO:0046872|GO:0046944 G3DSA:3.30.420.40|G3DSA:3.30.70.100|G3DSA:3.90.870.10|PF00708|PF01300|PF07503|PIRSF006256|SSF54975|SSF55821|TIGR00143 RSDT_RS05275 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005225|IPR006073|IPR015946|IPR016484|IPR027417|IPR032859 GTP binding domain|GTP-binding protein EngA|GTPase Der, C-terminal KH-domain-like|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0005525 G3DSA:1.20.120.430|G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00195|PF01926|PF14714|PIRSF006485|PR00326|SSF52540|TIGR00231|TIGR03594 RSDT_RS05290 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002173|IPR011611|IPR029056 Carbohydrate kinase PfkB|Carbohydrate/puine kinase, PfkB, conserved site|Ribokinase-like GO:0016773 G3DSA:3.40.1190.20|PF00294|PS00583|PS00584|SSF53613 RSDT_RS05295 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004323|IPR011322|IPR015867 Divalent ion tolerance protein, CutA|Nitrogen regulatory PII-like, alpha/beta|Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal GO:0010038 G3DSA:3.30.70.120|PF03091|SSF54913 RSDT_RS05305 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002586|IPR004459|IPR011698|IPR027417|IPR029062 Class I glutamine amidotransferase-like|CobB/CobQ-like glutamine amidotransferase|CobQ/CobB/MinD/ParA nucleotide binding domain|Cobyric acid synthase CobQ|P-loop containing nucleoside triphosphate hydrolase GO:0003824|GO:0009236 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_00028|PF01656|PF07685|SSF52317|SSF52540|TIGR00313 RSDT_RS05310 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003593|IPR004504|IPR014721|IPR020568|IPR027417 AAA+ ATPase domain|DNA repair protein RadA|P-loop containing nucleoside triphosphate hydrolase|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup GO:0003684|GO:0005524|GO:0006281 G3DSA:3.30.230.10|G3DSA:3.40.50.300|MF_01498|PF13481|PR01874|SM00382|SSF52540|SSF54211|TIGR00416 RSDT_RS05315 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR023577|IPR033469 CYTH domain|CYTH-like domain G3DSA:2.40.320.10|PD009560|PF01928|SM01118|SSF55154 RSDT_RS05320 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003769|IPR014719|IPR022935 ATP-dependent Clp protease adaptor protein ClpS|Adaptor protein ClpS, core|Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like GO:0030163 G3DSA:3.30.1390.10|MF_00302|PF02617|SSF54736 RSDT_RS05325 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001270|IPR003593|IPR003959|IPR004176|IPR013461|IPR018368|IPR019489|IPR027417|IPR028299 AAA+ ATPase domain|ATP-dependent Clp protease ATP-binding subunit ClpA|ATPase, AAA-type, core|Clp ATPase, C-terminal|Clp, N-terminal|ClpA/B family|ClpA/B, conserved site 1|ClpA/B, conserved site 2|P-loop containing nucleoside triphosphate hydrolase GO:0004176|GO:0005524|GO:0019538 G3DSA:1.10.1780.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00004|PF02861|PF07724|PF10431|PR00300|PS00870|PS00871|SM00382|SM01086|SSF52540|SSF81923|TIGR02639 RSDT_RS05330 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001650|IPR001943|IPR004807|IPR006935|IPR014001|IPR024759|IPR027417 Helicase superfamily 1/2, ATP-binding domain|Helicase, C-terminal|Helicase/UvrB, N-terminal|P-loop containing nucleoside triphosphate hydrolase|UVR domain|UvrABC system, subunit B|UvrB, YAD/RRR-motif-containing domain GO:0003677|GO:0005515|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432|GO:0016787 G3DSA:3.40.50.300|G3DSA:4.10.860.10|MF_00204|PF00271|PF02151|PF04851|PF12344|SM00487|SM00490|SSF46600|SSF52540|TIGR00631 RSDT_RS05340 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002293|IPR004840|IPR004841 Amino acid permease, conserved site|Amino acid permease/ SLC12A domain|Amino acid/polyamine transporter I GO:0003333|GO:0006810|GO:0006865|GO:0015171|GO:0016020|GO:0016021|GO:0055085 PF00324|PIRSF006060|PS00218 RSDT_RS05345 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001608|IPR011078|IPR029066 Alanine racemase, N-terminal|PLP-binding barrel|Pyridoxal phosphate homeostasis protein G3DSA:3.20.20.10|PF01168|PIRSF004848|SSF51419|TIGR00044 RSDT_RS05350 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004044|IPR005225|IPR005662|IPR006073|IPR009019|IPR015946|IPR027417 GTP binding domain|GTP-binding protein Era|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain GO:0003723|GO:0005525|GO:0005622 G3DSA:3.30.300.20|G3DSA:3.40.50.300|MF_00367|PF01926|PF07650|SSF52540|SSF54814|TIGR00231|TIGR00436 RSDT_RS05360 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008921|IPR010372|IPR027417 DNA polymerase III delta, N-terminal|DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003887|GO:0006260|GO:0009360 G3DSA:1.10.8.60|G3DSA:1.20.272.10|G3DSA:3.40.50.300|PF06144|SSF48019|SSF52540 RSDT_RS05365 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001412|IPR002300|IPR002302|IPR009008|IPR009080|IPR013155|IPR014729|IPR015413|IPR025709 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Leucine-tRNA ligase|Leucyl-tRNA synthetase, editing domain|Methionyl/Leucyl tRNA synthetase|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0000166|GO:0002161|GO:0004812|GO:0004823|GO:0005524|GO:0006418|GO:0006429 G3DSA:1.10.730.10|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_00049_B|PF00133|PF08264|PF09334|PF13603|PR00985|PS00178|SSF47323|SSF50677|SSF52374|TIGR00396 RSDT_RS05370 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006027|IPR011605 NusB antitermination factor|NusB/RsmB/TIM44 GO:0003723|GO:0006353|GO:0006355 G3DSA:1.10.940.10|MF_00073|PF01029|SSF48013|TIGR01951 RSDT_RS05375 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002180|IPR034964 Lumazine synthase|Lumazine/riboflavin synthase GO:0000906|GO:0009231|GO:0009349 G3DSA:3.40.50.960|MF_00178|PF00885|SSF52121|TIGR00114 RSDT_RS05380 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001783|IPR017938|IPR023366|IPR026017 ATP synthase subunit alpha-like domain|Lumazine-binding domain|Lumazine-binding protein|Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 G3DSA:2.40.30.20|PF00677|PIRSF000498|SSF63380|TIGR00187 RSDT_RS05385 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002125|IPR002734|IPR004794|IPR016193|IPR024072 Bacterial bifunctional deaminase-reductase, C-terminal|Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase-like|Dihydrofolate reductase-like domain|Riboflavin biosynthesis protein RibD GO:0003824|GO:0008703|GO:0008835|GO:0009231|GO:0055114 G3DSA:3.40.140.10|G3DSA:3.40.430.10|PF00383|PF01872|PIRSF006769|SSF53597|SSF53927|TIGR00326 RSDT_RS05390 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002125|IPR016192|IPR016193|IPR016473 APOBEC/CMP deaminase, zinc-binding|Cytidine and deoxycytidylate deaminase domain|Cytidine deaminase-like|Deoxycytidylate deaminase GO:0003824|GO:0004132|GO:0006220|GO:0008270|GO:0016787 G3DSA:3.40.140.10|PF00383|PIRSF006019|PS00903|SSF53927 RSDT_RS05395 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001085|IPR015421|IPR015422|IPR015424|IPR019798 Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2|Serine hydroxymethyltransferase|Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0003824|GO:0004372|GO:0006545|GO:0030170|GO:0035999 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|MF_00051|PF00464|PIRSF000412|PS00096|SSF53383 RSDT_RS05400 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR014030|IPR014031|IPR016039|IPR017568|IPR018201|IPR020841 3-oxoacyl-[acyl-carrier-protein] synthase 2|Beta-ketoacyl synthase, C-terminal|Beta-ketoacyl synthase, N-terminal|Beta-ketoacyl synthase, active site|Polyketide synthase, beta-ketoacyl synthase domain|Thiolase-like GO:0003824|GO:0006633|GO:0008152|GO:0016747 G3DSA:3.40.47.10|PF00109|PF02801|PIRSF000447|PS00606|SM00825|SSF53901|TIGR03150 RSDT_RS05405 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003231|IPR006162|IPR009081 Acyl carrier protein (ACP)|Phosphopantetheine attachment site|Phosphopantetheine binding ACP domain GO:0006633 G3DSA:1.10.1200.10|MF_01217|PD000887|PF00550|PS00012|SSF47336|TIGR00517 RSDT_RS05410 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002347|IPR011284|IPR016040 3-oxoacyl-(acyl-carrier-protein) reductase|NAD(P)-binding domain|Short-chain dehydrogenase/reductase SDR GO:0004316|GO:0006633|GO:0051287|GO:0055114 G3DSA:3.40.50.720|PF13561|PR00080|PR00081|SM00822|SSF51735|TIGR01830 RSDT_RS05415 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004655|IPR013747|IPR013751|IPR016039 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III|3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal|3-oxoacyl-[acyl-carrier-protein] synthase 3|Thiolase-like GO:0003824|GO:0004315|GO:0006633|GO:0008152 G3DSA:3.40.47.10|MF_01815|PF08541|PF08545|SSF53901|TIGR00747 RSDT_RS05420 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003664|IPR012281 Fatty acid synthesis PlsX protein|Phospholipid biosynthesis protein, PlsX-like GO:0003824|GO:0006633|GO:0016747 G3DSA:3.40.718.10|MF_00019|PF02504|PIRSF002465|SSF53659|TIGR00182 RSDT_RS05425 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002677|IPR011332 Ribosomal protein L32p|Zinc-binding ribosomal protein GO:0003735|GO:0006412|GO:0015934 MF_00340|PF01783|SSF57829|TIGR01031 RSDT_RS05430 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 RSDT_RS05435 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006680|IPR011059|IPR032466 Amidohydrolase-related|Metal-dependent hydrolase|Metal-dependent hydrolase, composite domain GO:0016787|GO:0016810 G3DSA:2.30.40.10|G3DSA:3.20.20.140|PF01979|SSF51338|SSF51556 RSDT_RS05450 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR023234 NarG-like domain G3DSA:1.20.950.20|PF02665|SSF103501 RSDT_RS05455 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004017|IPR009051|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|Alpha-helical ferredoxin|Cysteine-rich domain GO:0051536 G3DSA:1.10.1060.10|PF02754|PF13183|PS00198|SSF46548 RSDT_RS05465 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006115|IPR008927|IPR013328|IPR015815|IPR016040|IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain|3-hydroxyisobutyrate dehydrogenase-related|6-phosphogluconate dehydrogenase C-terminal domain-like|6-phosphogluconate dehydrogenase, NADP-binding|6-phosphogluconate dehydrogenase, domain 2|NAD(P)-binding domain GO:0004616|GO:0016491|GO:0051287|GO:0055114 G3DSA:1.10.1040.10|G3DSA:3.40.50.720|PF03446|PF14833|PIRSF000103|SSF48179|SSF51735 RSDT_RS05475 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013785 Aldolase-type TIM barrel GO:0003824 G3DSA:3.20.20.70|SSF102114 RSDT_RS05485 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006073|IPR006074|IPR006169|IPR014100|IPR027417|IPR035101 GTP binding domain|GTP-binding protein Obg/CgtA|GTP-binding protein, Obg-type|GTP1/OBG domain|GTP1/OBG, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0000287|GO:0003924|GO:0005525 G3DSA:2.70.210.12|G3DSA:3.40.50.300|MF_01454|PF01018|PF01926|PIRSF002401|PR00326|PS00905|SSF52540|SSF82051|TIGR02729 RSDT_RS05490 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001048|IPR001057|IPR002478|IPR005715|IPR011529|IPR015947|IPR019797 Aspartate/glutamate/uridylate kinase|Glutamate 5-kinase|Glutamate 5-kinase, conserved site|Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase|Glutamate/acetylglutamate kinase|PUA domain|PUA-like domain GO:0003723|GO:0004349|GO:0005737|GO:0006561 G3DSA:2.30.130.10|G3DSA:3.40.1160.10|MF_00456|PF00696|PF01472|PIRSF000729|PR00474|PS00902|SM00359|SSF53633|SSF88697|TIGR01027 RSDT_RS05495 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002869|IPR019752 Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016491|GO:0016903|GO:0055114 G3DSA:3.40.920.10|PF01558|SSF53323 RSDT_RS05500 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011766|IPR029061 Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 G3DSA:3.40.50.970|PF02775|SSF52518 RSDT_RS05505 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002880|IPR009014|IPR029061|IPR033412 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152|GO:0016491|GO:0055114 G3DSA:3.40.50.970|PF01855|PF17147|SSF52518|SSF52922 RSDT_RS05510 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain G3DSA:3.30.70.20|PF12838|PS00198|SSF54862 RSDT_RS05515 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 G3DSA:3.40.1780.10|MF_00113|PF02547|SSF111337|TIGR00113 RSDT_RS05525 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001383|IPR026569|IPR034704 L28p-like|Ribosomal protein L28|Ribosomal protein L28/L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.170.40|MF_00373|PF00830|SSF143800|TIGR00009 RSDT_RS05535 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006137|IPR017896|IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|4Fe-4S ferredoxin-type, iron-sulphur binding domain|NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.40.50.700|PF00037|PF01058|PS00198|SSF54862|SSF56770 RSDT_RS05545 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001750|IPR003918 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437 RSDT_RS05550 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic PD037531 RSDT_RS05555 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 PF00146 RSDT_RS05560 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001750|IPR003918 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit|NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 PF00361|PR01437 RSDT_RS05565 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR028154 AMP-dependent ligase, C-terminal PF14535 RSDT_RS05570 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025399 Domain of unknown function DUF4372 PF14294 RSDT_RS05575 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004839|IPR015421|IPR015422|IPR015424 Aminotransferase, class I/classII|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824|GO:0009058|GO:0030170 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF00155|SSF53383 RSDT_RS05580 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 RSDT_RS05585 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 G3DSA:3.20.20.370|SSF88713 RSDT_RS05590 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001296 Glycosyl transferase, family 1 G3DSA:3.40.50.2000|PF00534|SSF53756 RSDT_RS05595 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001962|IPR006426|IPR014729|IPR017932|IPR029055 Asparagine synthase|Asparagine synthase, glutamine-hydrolyzing|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Rossmann-like alpha/beta/alpha sandwich fold GO:0004066|GO:0006529 G3DSA:3.40.50.620|G3DSA:3.60.20.10|PF00733|PF13537|PIRSF001589|SSF52402|SSF56235|TIGR01536 RSDT_RS05605 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000422|IPR000926|IPR016299|IPR017945|IPR032677 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB|DHBP synthase RibB-like alpha/beta domain|GTP cyclohydrolase II|GTP cyclohydrolase II, RibA|Riboflavin biosynthesis protein RibBA GO:0003935|GO:0008686|GO:0009231 G3DSA:3.90.870.10|MF_00179|MF_00180|MF_01283|PF00925|PF00926|PIRSF001259|SSF142695|SSF55821|TIGR00505|TIGR00506 RSDT_RS05635 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000037|IPR020081|IPR023620 Small protein B|SsrA-binding protein|SsrA-binding protein, conserved site GO:0003723 G3DSA:2.40.280.10|MF_00023|PD004488|PF01668|PS01317|SSF74982|TIGR00086 RSDT_RS05640 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000878|IPR008189|IPR014776|IPR014777 Tetrapyrrole methylase|Tetrapyrrole methylase, subdomain 1|Tetrapyrrole methylase, subdomain 2|rRNA small subunit methyltransferase I GO:0008152|GO:0008168 G3DSA:3.30.950.10|G3DSA:3.40.1010.10|MF_01877|PF00590|PIRSF005917|SSF53790|TIGR00096 RSDT_RS05650 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR012337|IPR022898|IPR024567 Ribonuclease H-like domain|Ribonuclease HII|Ribonuclease HII/HIII domain GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00052_B|PF01351|SSF53098 RSDT_RS05655 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001857|IPR008991|IPR018257 Ribosomal protein L19|Ribosomal protein L19, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00402|PF01245|PIRSF002191|PR00061|PS01015|SSF50104|TIGR01024 RSDT_RS05660 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002649|IPR016009|IPR019230|IPR029026|IPR029028 Alpha/beta knot methyltransferases|RNA methyltransferase domain|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanine-N1-)-methyltransferase, bacteria|tRNA methyltransferase TRMD/TRM10-type domain GO:0008033|GO:0052906 G3DSA:1.10.1270.20|G3DSA:3.40.1280.10|MF_00605|PF01746|PF09936|SSF75217|TIGR00088 RSDT_RS05665 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 G3DSA:3.90.470.20|PF01648|SSF56214 RSDT_RS05670 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004821|IPR005248|IPR014729 Cytidyltransferase-like domain|Nicotinate/nicotinamide nucleotide adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0009058|GO:0009435|GO:0016779 G3DSA:3.40.50.620|MF_00244|PF01467|SSF52374|TIGR00482 RSDT_RS05675 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000965|IPR012134|IPR015590|IPR016161|IPR016162|IPR020593 Aldehyde dehydrogenase N-terminal domain|Aldehyde dehydrogenase domain|Aldehyde/histidinol dehydrogenase|GPR domain|Gamma-glutamyl phosphate reductase GPR, conserved site|Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0008152|GO:0016491|GO:0050661|GO:0055114 G3DSA:3.40.605.10|MF_00412|PF00171|PIRSF000151|PS01223|SSF53720|TIGR00407 RSDT_RS05680 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011990 Tetratricopeptide-like helical domain GO:0005515 G3DSA:1.25.40.10|SSF48452 RSDT_RS05690 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007922 Protein of unknown function DUF721/UPF0232 PF05258 RSDT_RS05695 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000043|IPR015878|IPR016040|IPR020082|IPR034373 Adenosylhomocysteinase|Adenosylhomocysteinase-like|NAD(P)-binding domain|S-adenosyl-L-homocysteine hydrolase, NAD binding domain|S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730|GO:0019510|GO:0051287 G3DSA:3.40.50.1480|MF_00563|PF00670|PF05221|PIRSF001109|PS00738|PS00739|SM00996|SM00997|SSF51735|SSF52283|TIGR00936 RSDT_RS05700 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002156|IPR012337|IPR022892 Ribonuclease H domain|Ribonuclease H-like domain|Ribonuclease HI GO:0003676|GO:0004523 G3DSA:3.30.420.10|MF_00042|PF00075|SSF53098 RSDT_RS05720 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR021729|IPR025303 Deacetylase PdaC|Domain of unknown function DUF3298 G3DSA:3.30.565.40|G3DSA:3.90.640.20|PF11738|PF13739 RSDT_RS05725 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 PF01699 RSDT_RS05735 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001387|IPR010982 Cro/C1-type helix-turn-helix domain|Lambda repressor-like, DNA-binding domain GO:0003677|GO:0043565 G3DSA:1.10.260.40|PF01381|SSF47413 RSDT_RS05750 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005839|IPR006638|IPR007197|IPR013785|IPR013848|IPR020612 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Methylthiotransferase|Methylthiotransferase, N-terminal|Methylthiotransferase, conserved site|Radical SAM GO:0003824|GO:0006400|GO:0016740|GO:0051536|GO:0051539 G3DSA:3.20.20.70|PF00919|PF04055|PS01278|SM00729|SSF102114|TIGR00089 RSDT_RS05755 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:3.90.20.10 RSDT_RS05765 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001848|IPR018268|IPR027486 Ribosomal protein S10|Ribosomal protein S10 domain|Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.600|MF_00508|PF00338|PR00971|PS00361|SM01403|SSF54999|TIGR01049 RSDT_RS05770 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000597|IPR009000|IPR019927 Ribosomal protein L3|Ribosomal protein L3, bacterial/organelle-type|Translation protein, beta-barrel domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.960.10|MF_01325_B|PF00297|SSF50447|TIGR03625 RSDT_RS05775 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002136|IPR013005|IPR023574 50S ribosomal protein uL4|Ribosomal protein L4 domain|Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 G3DSA:3.40.1370.10|MF_01328_B|PF00573|SSF52166|TIGR03953 RSDT_RS05780 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR012678|IPR013025 Ribosomal protein L23/L15e core domain|Ribosomal protein L25/L23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.70.330|MF_01369_B|PF00276|SSF54189 RSDT_RS05785 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002171|IPR005880|IPR008991|IPR012340|IPR014722|IPR014726|IPR022666|IPR022669|IPR022671 Nucleic acid-binding, OB-fold|Ribosomal Proteins L2, RNA binding domain|Ribosomal protein L2|Ribosomal protein L2 domain 2|Ribosomal protein L2, C-terminal|Ribosomal protein L2, bacterial/organellar-type|Ribosomal protein L2, conserved site|Ribosomal protein L2, domain 3|Translation protein SH3-like domain GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934|GO:0016740 G3DSA:2.30.30.30|G3DSA:2.40.50.140|G3DSA:4.10.950.10|MF_01320_B|PF00181|PF03947|PIRSF002158|PS00467|SM01382|SM01383|SSF50104|SSF50249|TIGR01171 RSDT_RS05790 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002222|IPR005732|IPR020934|IPR023575 Ribosomal protein S19 conserved site|Ribosomal protein S19, bacterial-type|Ribosomal protein S19, superfamily|Ribosomal protein S19/S15 GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.860.10|MF_00531|PF00203|PIRSF002144|PR00975|PS00323|SSF54570|TIGR01050 RSDT_RS05795 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001063|IPR005727|IPR018260 Ribosomal protein L22, bacterial/chloroplast-type|Ribosomal protein L22/L17|Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.90.470.10|MF_01331_B|PF00237|PS00464|SSF54843|TIGR01044 RSDT_RS05800 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001351|IPR004044|IPR004087|IPR005704|IPR009019|IPR015946|IPR018280 K Homology domain|K Homology domain, type 2|K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Ribosomal protein S3, C-terminal|Ribosomal protein S3, bacterial|Ribosomal protein S3, conserved site GO:0003676|GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.1140.32|G3DSA:3.30.300.20|MF_01309_B|PF00189|PF07650|PS00548|SM00322|SSF54814|SSF54821|TIGR01009 RSDT_RS05805 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000114|IPR016180|IPR020798 Ribosomal protein L10e/L16|Ribosomal protein L16|Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.1170.10|MF_01342|PF00252|PR00060|PS00586|SSF54686|TIGR01164 RSDT_RS05810 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.287.310|MF_00374|PF00831|SSF46561|TIGR00012 RSDT_RS05815 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000266|IPR012340|IPR019979|IPR019984 30S ribosomal protein S17|Nucleic acid-binding, OB-fold|Ribosomal protein S17, conserved site|Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.40.50.140|MF_01345_B|PD001295|PF00366|PR00973|PS00056|SSF50249|TIGR03635 RSDT_RS05820 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000218|IPR005745|IPR019972 Ribosomal protein L14P|Ribosomal protein L14P, conserved site|Ribosomal protein L14P, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0015934 G3DSA:2.40.150.20|MF_01367|PF00238|PS00049|SM01374|SSF50193|TIGR01067 RSDT_RS05825 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003256|IPR005824|IPR005825|IPR008991|IPR014722 KOW|Ribosomal protein L2 domain 2|Ribosomal protein L24|Ribosomal protein L24/L26, conserved site|Translation protein SH3-like domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:2.30.30.30|MF_01326_B|PF00467|PF17136|PS01108|SM00739|SSF50104|TIGR01079 RSDT_RS05830 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002132|IPR020929|IPR020930|IPR022803|IPR031309|IPR031310 Ribosomal protein L5|Ribosomal protein L5 domain|Ribosomal protein L5, C-terminal|Ribosomal protein L5, N-terminal|Ribosomal protein L5, bacterial-type|Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1440.10|MF_01333_B|PF00281|PF00673|PIRSF002161|PS00358|SSF55282 RSDT_RS05835 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001209|IPR018271|IPR023053 Ribosomal protein S14|Ribosomal protein S14, conserved site|Ribosomal protein S14, type Z GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.830.10|MF_01364_B|PF00253|PS00527|SSF57716 RSDT_RS05840 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 G3DSA:3.30.1370.30|G3DSA:3.30.1490.10|MF_01302_B|PF00410|PS00053|SSF56047 RSDT_RS05845 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000702|IPR002358|IPR019906|IPR020040 Ribosomal protein L6|Ribosomal protein L6, alpha-beta domain|Ribosomal protein L6, bacterial-type|Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.90.930.12|MF_01365_B|PF00347|PIRSF002162|PR00059|PS00525|SSF56053|TIGR03654 RSDT_RS05850 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004389|IPR005484 Ribosomal protein L18|Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.100|MF_01337_B|PF00861|SSF53137|TIGR00060 RSDT_RS05855 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005324|IPR005712|IPR013810|IPR014721|IPR018192|IPR020568 Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|Ribosomal protein S5, C-terminal|Ribosomal protein S5, N-terminal|Ribosomal protein S5, N-terminal, conserved site|Ribosomal protein S5, bacterial-type GO:0003723|GO:0003735|GO:0005840|GO:0006412|GO:0015935 G3DSA:3.30.160.20|G3DSA:3.30.230.10|MF_01307_B|PF00333|PF03719|PS00585|SSF54211|SSF54768|TIGR01021 RSDT_RS05860 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005996|IPR016082 Ribosomal protein L30, bacterial-type|Ribosomal protein L30, ferredoxin-like fold domain GO:0003735|GO:0006412|GO:0015934 G3DSA:3.30.1390.20|MF_01371_B|PF00327|PIRSF002211|SSF55129|TIGR01308 RSDT_RS05865 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001196|IPR005749|IPR021131|IPR030878 Ribosomal protein L15|Ribosomal protein L15, bacterial-type|Ribosomal protein L15, conserved site|Ribosomal protein L18e/L15P GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0015934 G3DSA:3.100.10.10|MF_01341|PF00828|PS00475|SSF52080|TIGR01071 RSDT_RS05870 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002208|IPR023201|IPR026593|IPR030659 Protein translocase subunit SecY|SecY conserved site|SecY subunit domain|SecY/SEC61-alpha family GO:0015031|GO:0016020 G3DSA:1.10.3370.10|MF_01465|PF00344|PIRSF004557|PR00303|PS00755|PS00756|SSF103491|TIGR00967 RSDT_RS05875 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000994|IPR001714|IPR002467 Peptidase M24|Peptidase M24, methionine aminopeptidase|Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 G3DSA:3.90.230.10|MF_01974|PF00557|PR00599|PS00680|SSF55920|TIGR00500 RSDT_RS05880 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 MF_00251|PD002101|PF00444|PS00828|SSF57840|TIGR01022 RSDT_RS05885 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001892|IPR010979|IPR019980|IPR027437 30s ribosomal protein S13, C-terminal|Ribosomal protein S13|Ribosomal protein S13, bacterial-type|Ribosomal protein S13-like, H2TH GO:0003676|GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:1.10.8.50|G3DSA:4.10.910.10|MF_01315|PF00416|PIRSF002134|SSF46946|TIGR03631 RSDT_RS05890 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001971|IPR018102|IPR019981 Ribosomal S11, conserved site|Ribosomal protein S11|Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.420.80|MF_01310|PF00411|PIRSF002131|PS00054|SSF53137|TIGR03632 RSDT_RS05895 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001912|IPR002942|IPR005709|IPR018079 RNA-binding S4 domain|Ribosomal protein S4, bacterial-type|Ribosomal protein S4, conserved site|Ribosomal protein S4/S9, N-terminal GO:0003723|GO:0003735|GO:0005622|GO:0006412|GO:0015935|GO:0019843 G3DSA:1.10.1050.10|G3DSA:3.10.290.10|MF_01306_B|PF00163|PF01479|PS00632|SM00363|SM01390|SSF55174|TIGR01017 RSDT_RS05900 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009025|IPR011260|IPR011262|IPR011263|IPR011773 DNA-directed RNA polymerase, RBP11-like dimerisation domain|DNA-directed RNA polymerase, RpoA/D/Rpb3-type|DNA-directed RNA polymerase, alpha subunit|DNA-directed RNA polymerase, insert domain|RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351|GO:0046983 G3DSA:1.10.150.20|G3DSA:3.30.1360.10|MF_00059|PD001179|PF01000|PF01193|PF03118|SM00662|SSF47789|SSF55257|SSF56553|TIGR02027 RSDT_RS05905 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.90.1030.10|MF_01368|PF01196|PS01167|SSF64263|TIGR00059 RSDT_RS05910 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004536|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Selenophosphate synthetase GO:0005524 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|PF00586|PF02769|PIRSF036407|SSF55326|SSF56042|TIGR00476 RSDT_RS05915 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000835|IPR011991 MarR-type HTH domain|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0006355 G3DSA:1.10.10.10|PF01047|PR00598|SM00347|SSF46785 RSDT_RS05920 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007318 Phospholipid methyltransferase PF04191 RSDT_RS05935 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004550|IPR006034|IPR020827|IPR027473|IPR027474|IPR027475 Asparaginase/glutaminase, active site 1|Asparaginase/glutaminase, active site 2|Asparaginase/glutaminase-like|L-asparaginase, C-terminal domain|L-asparaginase, N-terminal|L-asparaginase, type II GO:0004067|GO:0006520|GO:0006528 G3DSA:3.40.50.1170|G3DSA:3.40.50.40|PF00710|PIRSF001220|PIRSF500176|PR00139|PS00144|PS00917|SM00870|SSF53774|TIGR00520 RSDT_RS05940 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000307|IPR023803 Ribosomal protein S16|Ribosomal protein S16 domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.30.1320.10|MF_00385|PF00886|SSF54565|TIGR00002 RSDT_RS05945 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009019|IPR015946|IPR020627 K homology domain, prokaryotic type|K homology domain-like, alpha/beta|Uncharacterised protein family UPF0109 GO:0003723 G3DSA:3.30.300.20|MF_00088|PF13083|SSF54814 RSDT_RS05950 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002676|IPR009000|IPR011033|IPR011961 16S rRNA processing protein RimM|PRC-barrel-like|RimM protein|Translation protein, beta-barrel domain GO:0005840|GO:0006364|GO:0043022 G3DSA:2.30.30.240|G3DSA:2.40.30.60|MF_00014|PF01782|SSF50346|SSF50447|TIGR02273 RSDT_RS05955 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009081|IPR014043|IPR016035|IPR016036|IPR020801 Acyl transferase|Acyl transferase/acyl hydrolase/lysophospholipase|Malonyl-CoA ACP transacylase, ACP-binding|Phosphopantetheine binding ACP domain|Polyketide synthase, acyl transferase domain GO:0003824|GO:0008152 G3DSA:1.10.1200.10|G3DSA:3.40.366.10|PF00698|SM00827|SSF47336|SSF52151|SSF55048 RSDT_RS05960 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 G3DSA:1.20.1600.10|PF02321|SSF56954 RSDT_RS05965 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain G3DSA:1.20.1600.10|G3DSA:2.40.50.100|PF16576 RSDT_RS05970 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic PF13440 RSDT_RS05980 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:3.40.50.2000|PF13692|SSF53756 RSDT_RS05985 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003773|IPR030868 Chorismate dehydratase|Menaquinone biosynthesis enzyme GO:0009234|GO:0016829 G3DSA:3.40.190.10|MF_00995|PF02621|SSF53850 RSDT_RS05990 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:3.30.420.40 RSDT_RS05995 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR018022|IPR027417 P-loop containing nucleoside triphosphate hydrolase|tRNA dimethylallyltransferase GO:0008033 G3DSA:1.10.287.890|G3DSA:3.40.50.300|MF_00185|PF01715|SSF52540|TIGR00174 RSDT_RS06000 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001980|IPR004821|IPR014729 Cytidyltransferase-like domain|Phosphopantetheine adenylyltransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003824|GO:0004595|GO:0009058|GO:0015937 G3DSA:3.40.50.620|MF_00151|PF01467|PR01020|SSF52374|TIGR00125|TIGR01510 RSDT_RS06005 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002052|IPR004398|IPR029063 DNA methylase, N-6 adenine-specific, conserved site|RNA methyltransferase, RsmD|S-adenosyl-L-methionine-dependent methyltransferase GO:0003676|GO:0008168|GO:0031167|GO:0032259 G3DSA:3.40.50.150|PF03602|PIRSF004553|PS00092|SSF53335|TIGR00095 RSDT_RS06010 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005269|IPR031100 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG|LOG family G3DSA:3.40.50.450|PF03641|SSF102405|TIGR00730 RSDT_RS06015 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR016192|IPR016193|IPR028883 APOBEC/CMP deaminase, zinc-binding|Cytidine deaminase-like|tRNA-specific adenosine deaminase GO:0002100|GO:0003824|GO:0008251|GO:0008270|GO:0016787 G3DSA:3.40.140.10|MF_00972|PF14437|PS00903|SSF53927 RSDT_RS06020 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR012165|IPR017938|IPR019480 Cytochrome-c3 hydrogenase, gamma subunit|Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain|Riboflavin synthase-like beta-barrel GO:0006221|GO:0016491|GO:0050660|GO:0051537|GO:0055114 G3DSA:2.10.240.10|G3DSA:2.40.30.10|G3DSA:3.40.50.80|PF10418|PIRSF006816|SSF52343|SSF63380 RSDT_RS06025 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001295|IPR005720|IPR012135|IPR013785|IPR024920 Aldolase-type TIM barrel|Dihydroorotate dehydrogenase domain|Dihydroorotate dehydrogenase, class 1|Dihydroorotate dehydrogenase, class 1/ 2|Dihydroorotate dehydrogenase, conserved site GO:0003824|GO:0004152|GO:0005737|GO:0006207|GO:0006221|GO:0006222|GO:0016627|GO:0055114 G3DSA:3.20.20.70|MF_00224|PF01180|PIRSF000164|PS00911|PS00912|SSF51395|TIGR01037 RSDT_RS06030 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR016181 Acyl-CoA N-acyltransferase G3DSA:3.40.630.30|SSF55729 RSDT_RS06035 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001509|IPR016040 NAD(P)-binding domain|NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF01370|SSF51735 RSDT_RS06040 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR027417|IPR032781 AAA+ ATPase domain|ABC transporter-like|ABC-transporter extension domain|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:1.20.58.410|G3DSA:3.40.50.300|PF00005|PF12848|SM00382|SSF52540 RSDT_RS06045 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003329|IPR029044 Acylneuraminate cytidylyltransferase|Nucleotide-diphospho-sugar transferases G3DSA:3.90.550.10|PF02348|SSF53448 RSDT_RS06050 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007235|IPR025877|IPR029044 Glycosyl transferase, family 28, C-terminal|MobA-like NTP transferase|Nucleotide-diphospho-sugar transferases GO:0016758 G3DSA:3.40.50.2000|G3DSA:3.90.550.10|PF04101|PF12804|SSF53448|SSF53756 RSDT_RS06055 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000653|IPR015421|IPR015422|IPR015424 DegT/DnrJ/EryC1/StrS aminotransferase|Pyridoxal phosphate-dependent transferase|Pyridoxal phosphate-dependent transferase, major region, subdomain 1|Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 G3DSA:3.40.640.10|G3DSA:3.90.1150.10|PF01041|PIRSF000390|SSF53383 RSDT_RS06060 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 G3DSA:1.20.1090.10|G3DSA:3.40.50.1970|PF00465|SSF56796 RSDT_RS06065 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000672|IPR016040|IPR020630|IPR020631|IPR020867 NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase|Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain|Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0004488|GO:0055114 G3DSA:3.40.50.10860|G3DSA:3.40.50.720|MF_01576|PF00763|PF02882|PR00085|PS00767|SSF51735|SSF53223 RSDT_RS06070 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000941|IPR020809|IPR020810|IPR020811|IPR029017|IPR029065 Enolase|Enolase C-terminal domain-like|Enolase N-terminal domain-like|Enolase, C-terminal TIM barrel domain|Enolase, N-terminal|Enolase, conserved site GO:0000015|GO:0000287|GO:0004634|GO:0006096 G3DSA:3.20.20.120|G3DSA:3.30.390.10|MF_00318|PF00113|PF03952|PIRSF001400|PR00148|PS00164|SM01192|SM01193|SSF51604|SSF54826|TIGR01060 RSDT_RS06075 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004619 Type III pantothenate kinase GO:0004594 G3DSA:3.30.420.40|MF_01274|PF03309|SSF53067|TIGR00671 RSDT_RS06080 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003594|IPR003661|IPR004358 Histidine kinase-like ATPase, C-terminal domain|Signal transduction histidine kinase, dimerisation/phosphoacceptor domain|Signal transduction histidine kinase-related protein, C-terminal GO:0000155|GO:0007165|GO:0016310|GO:0016772 G3DSA:1.10.287.130|G3DSA:3.30.565.10|PF00512|PF02518|PR00344|SM00387|SM00388|SSF47384|SSF55874 RSDT_RS06085 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001672|IPR018189 Phosphoglucose isomerase (PGI)|Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 G3DSA:3.40.50.10490|PF00342|PR00662|PS00765|SSF53697 RSDT_RS06100 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR032621 Protein of unknown function DUF4881 PF16222 RSDT_RS06105 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002781 Transmembrane protein TauE-like GO:0016021 PF01925 RSDT_RS06115 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002078|IPR003593|IPR011991|IPR025662|IPR025943|IPR025944|IPR027417 AAA+ ATPase domain|P-loop containing nucleoside triphosphate hydrolase|RNA polymerase sigma factor 54 interaction domain|Sigma-54 interaction domain, ATP-binding site 1|Sigma-54 interaction domain, ATP-binding site 2|Sigma-54 interaction domain, conserved site|Winged helix-turn-helix DNA-binding domain GO:0005524|GO:0006355|GO:0008134 G3DSA:1.10.10.10|G3DSA:1.10.8.60|G3DSA:3.30.450.20|G3DSA:3.40.50.300|PF00158|PS00675|PS00676|PS00688|SM00382|SSF52540 RSDT_RS06120 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002192|IPR008279|IPR013815 ATP-grasp fold, subdomain 1|PEP-utilising enzyme, mobile domain|Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0003824|GO:0005524|GO:0016301|GO:0016310|GO:0016772 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.50.30.10|PF00391|PF01326|SSF52009|SSF56059 RSDT_RS06125 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011701|IPR020846 Major facilitator superfamily|Major facilitator superfamily domain GO:0016021|GO:0055085 G3DSA:1.20.1250.20|PF07690|SSF103473 RSDT_RS06135 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003203|IPR027417 Cobinamide kinase/cobinamide phosphate guanyltransferase|P-loop containing nucleoside triphosphate hydrolase GO:0000166|GO:0009236|GO:0043752|GO:0051188 G3DSA:3.40.50.300|PF02283|PIRSF006135|SSF52540 RSDT_RS06145 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000485|IPR011991|IPR019888 AsnC-type HTH domain|Transcription regulator AsnC-type|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|PF13404|SM00344|SSF46785 RSDT_RS06150 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006638|IPR007197|IPR013785|IPR023885|IPR030896 4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Heme b synthase|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13186|PF13353|PIRSF037420|SM00729|SSF102114|TIGR04085|TIGR04545 RSDT_RS06155 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001731|IPR013785|IPR030656 Aldolase-type TIM barrel|Delta-aminolevulinic acid dehydratase|Delta-aminolevulinic acid dehydratase, active site GO:0003824|GO:0004655|GO:0033014|GO:0046872 G3DSA:3.20.20.70|PF00490|PIRSF001415|PR00144|PS00169|SM01004|SSF51569 RSDT_RS06160 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006638|IPR007197|IPR013785|IPR023885|IPR030894 12,18-Didecarboxysiroheme deacetylase|4Fe4S-binding SPASM domain|Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Radical SAM GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF13353|PIRSF037420|SM00729|SSF102114|TIGR04085|TIGR04546 RSDT_RS06165 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002318|IPR003156|IPR009000|IPR012947|IPR018162|IPR018163|IPR018164|IPR023033 Alanine-tRNA ligase, class IIc|Alanine-tRNA ligase, class IIc, anti-codon-binding domain|Alanine-tRNA ligase, eukaryota/bacteria|Alanyl-tRNA synthetase, class IIc, N-terminal|DHHA1 domain|Threonyl/alanyl tRNA synthetase, SAD|Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain|Translation protein, beta-barrel domain GO:0000166|GO:0003676|GO:0004813|GO:0005524|GO:0005737|GO:0006419|GO:0016876|GO:0043039 G3DSA:3.30.930.10|G3DSA:3.30.980.10|MF_00036_B|PF01411|PF02272|PF07973|PR00980|SM00863|SSF101353|SSF50447|SSF55186|SSF55681|TIGR00344 RSDT_RS06170 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003593|IPR013765|IPR020584|IPR023400|IPR027417 AAA+ ATPase domain|DNA recombination and repair protein RecA|DNA recombination and repair protein RecA, C-terminal|DNA recombination/repair protein RecA, conserved site|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003697|GO:0005524|GO:0006259|GO:0006281|GO:0008094 G3DSA:3.30.250.10|G3DSA:3.40.50.300|MF_00268|PF00154|PR00142|PS00321|SM00382|SSF52540|SSF54752|TIGR02012 RSDT_RS06175 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025669|IPR027417 AAA domain|P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13614|PR00091|SSF52540 RSDT_RS06180 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003115|IPR004437 ParB/RepB/Spo0J partition protein family|ParB/Sulfiredoxin GO:0003677 G3DSA:1.10.10.730|G3DSA:3.90.1530.10|PF02195|SM00470|SSF110849|TIGR00180 RSDT_RS06185 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002376|IPR005793|IPR005794|IPR011034 Formyl transferase, C-terminal|Formyl transferase, C-terminal-like|Formyl transferase, N-terminal|Methionyl-tRNA formyltransferase GO:0003824|GO:0004479|GO:0009058|GO:0016742|GO:0071951 G3DSA:3.10.25.10|G3DSA:3.40.50.170|MF_00182|PF00551|PF02911|SSF50486|SSF53328|TIGR00460 RSDT_RS06190 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR023635 Peptide deformylase G3DSA:3.90.45.10|MF_00163|PF01327|PIRSF004749|PR01576|SSF56420|TIGR00079 RSDT_RS06195 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002312|IPR004115|IPR004364|IPR004365|IPR004524|IPR012340|IPR029351 Aminoacyl-tRNA synthetase, class II (D/K/N)|Aspartate-tRNA ligase, type 1|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|GAD domain|GAD-like domain|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0005524|GO:0005737|GO:0006418|GO:0016874 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00044|PF00152|PF01336|PF02938|PR01042|SSF50249|SSF55261|SSF55681|TIGR00459 RSDT_RS06200 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004154|IPR004516|IPR015807 Anticodon-binding|Histidine-tRNA ligase|Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0004821|GO:0005524|GO:0005737|GO:0006427 G3DSA:3.30.930.10|G3DSA:3.40.50.800|MF_00127|PF03129|PF13393|PIRSF001549|SSF52954|SSF55681|TIGR00442 RSDT_RS06205 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005854|IPR017932|IPR029055|IPR029057 Amidophosphoribosyltransferase|Glutamine amidotransferase type 2 domain|Nucleophile aminohydrolases, N-terminal|Phosphoribosyltransferase-like GO:0004044|GO:0009113 G3DSA:3.40.50.2020|G3DSA:3.60.20.10|MF_01931|PF13537|PIRSF000485|SSF53271|SSF56235|TIGR01134 RSDT_RS06210 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002205|IPR005743|IPR006691|IPR013757|IPR013758|IPR013760|IPR024946|IPR035516 Arginine repressor C-terminal-like domain|DNA gyrase, subunit A|DNA gyrase/topoisomerase IV, subunit A, C-terminal|DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat|DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta|DNA topoisomerase, type IIA, subunit A/C-terminal|DNA topoisomerase, type IIA-like domain|Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003916|GO:0003918|GO:0005524|GO:0005694|GO:0006259|GO:0006265 G3DSA:1.10.268.10|G3DSA:2.120.10.90|G3DSA:3.30.1360.40|G3DSA:3.90.199.10|MF_01897|PF00521|PF03989|SM00434|SSF101904|SSF56719|TIGR01063 RSDT_RS06215 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000565|IPR001241|IPR002288|IPR003594|IPR006171|IPR011557|IPR013506|IPR013759|IPR013760|IPR014721|IPR018522|IPR020568 DNA gyrase B subunit, C-terminal|DNA gyrase, subunit B|DNA topoisomerase, type IIA|DNA topoisomerase, type IIA, central domain|DNA topoisomerase, type IIA, conserved site|DNA topoisomerase, type IIA, subunit B|DNA topoisomerase, type IIA, subunit B, domain 2|DNA topoisomerase, type IIA-like domain|Histidine kinase-like ATPase, C-terminal domain|Ribosomal protein S5 domain 2-type fold|Ribosomal protein S5 domain 2-type fold, subgroup|TOPRIM domain GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 G3DSA:3.30.230.10|G3DSA:3.30.565.10|G3DSA:3.40.50.670|MF_01898|PF00204|PF00986|PF01751|PF02518|PR00418|PR01159|PS00177|SM00387|SM00433|SSF54211|SSF55874|SSF56719|TIGR01059 RSDT_RS06220 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001001|IPR022634|IPR022635 DNA polymerase III, beta chain|DNA polymerase III, beta chain, C-terminal|DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 G3DSA:3.10.150.10|PF00712|PF02768|SM00480|SSF55979|TIGR00663 RSDT_RS06225 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010921|IPR013159|IPR013317|IPR018312|IPR020591|IPR027417 Chromosomal replication control, initiator DnaA, conserved site|Chromosomal replication control, initiator DnaA-like|Chromosomal replication initiator protein DnaA|Chromosomal replication initiator, DnaA C-terminal|P-loop containing nucleoside triphosphate hydrolase|Trp repressor/replication initiator GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275|GO:0043565 G3DSA:1.10.1750.10|G3DSA:1.10.8.60|G3DSA:3.40.50.300|PF00308|PF08299|PR00051|PS01008|SM00760|SSF48295|SSF52540 RSDT_RS06230 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011055|IPR016047 Duplicated hybrid motif|Peptidase M23 G3DSA:2.70.70.10|PF01551|SSF51261 RSDT_RS06235 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000031 PurE domain GO:0006189 G3DSA:3.40.50.7700|PF00731|SM01001|SSF52255 RSDT_RS06240 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000623|IPR027417|IPR031322 P-loop containing nucleoside triphosphate hydrolase|Shikimate kinase/Threonine synthase-like 1|Shikimate kinase/gluconokinase G3DSA:3.40.50.300|MF_00109|PF01202|PR01100|SSF52540 RSDT_RS06250 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002035|IPR006664|IPR006665|IPR006690 OmpA-like domain|Outer membrane protein, OmpA-like, conserved site|Outer membrane protein, bacterial|von Willebrand factor, type A GO:0009279|GO:0016021 G3DSA:3.30.1330.60|G3DSA:3.40.50.410|PF00691|PR01021|PS01068|SSF103088|SSF53300 RSDT_RS06255 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000644|IPR001093|IPR005990|IPR013785|IPR015875 Aldolase-type TIM barrel|CBS domain|IMP dehydrogenase / GMP reductase, conserved site|IMP dehydrogenase/GMP reductase|Inosine-5'-monophosphate dehydrogenase GO:0003824|GO:0003938|GO:0006164|GO:0016491|GO:0055114 G3DSA:3.20.20.70|MF_01964|PF00478|PF00571|PIRSF000130|PS00487|SM00116|SM01240|SSF51412|SSF54631|TIGR01302 RSDT_RS06260 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001674|IPR004739|IPR014729|IPR017926|IPR022955|IPR029062 Class I glutamine amidotransferase-like|GMP synthase|GMP synthase, C-terminal|GMP synthase, glutamine amidotransferase|Glutamine amidotransferase|Rossmann-like alpha/beta/alpha sandwich fold GO:0003922|GO:0005524|GO:0006164|GO:0006177 G3DSA:3.30.300.10|G3DSA:3.40.50.620|G3DSA:3.40.50.880|MF_00344|PF00117|PF00958|PR00096|PR00097|PR00099|SSF52317|SSF52402|SSF54810|TIGR00884|TIGR00888 RSDT_RS06265 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003369|IPR003998 Sec-independent protein translocase protein TatA/B/E|Twin-arginine translocation protein TatB-like GO:0008565|GO:0009306|GO:0015031|GO:0016020 PF02416|PR01506 RSDT_RS06270 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002033|IPR019820 Sec-independent periplasmic protein translocase TatC|Sec-independent periplasmic protein translocase, conserved site GO:0016021 MF_00902|PF00902|PR01840|PS01218|TIGR00945 RSDT_RS06275 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000807|IPR020565|IPR020568 Imidazoleglycerol-phosphate dehydratase|Imidazoleglycerol-phosphate dehydratase, conserved site|Ribosomal protein S5 domain 2-type fold GO:0000105|GO:0004424 G3DSA:3.30.230.40|MF_00076|PF00475|PS00954|SSF54211 RSDT_RS06285 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006062|IPR011060|IPR013785|IPR023016 Aldolase-type TIM barrel|Histidine biosynthesis|Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase|Ribulose-phosphate binding barrel GO:0000105|GO:0003824|GO:0003949|GO:0008152 G3DSA:3.20.20.70|MF_01014|PF00977|SSF51366 RSDT_RS06290 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001228|IPR003526|IPR018294|IPR020555|IPR026596|IPR029044|IPR034683 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase|2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site|2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase|4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site|Bifunctional enzyme IspD/IspF|Cytidylyltransferase IspD/TarI|Nucleotide-diphospho-sugar transferases GO:0003824|GO:0008299|GO:0008685|GO:0016114|GO:0050518|GO:0070567 G3DSA:3.30.1330.50|G3DSA:3.90.550.10|MF_00107|MF_00108|MF_01520|PF01128|PF02542|PS01295|PS01350|SSF53448|SSF69765|TIGR00151|TIGR00453 RSDT_RS06300 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003743 C4-type zinc ribbon domain G3DSA:1.20.120.330|PF02591 RSDT_RS06305 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002678 GTP cyclohydrolase 1 type 2/Nif3 G3DSA:3.40.1390.30|PF01784|SSF102705|TIGR00486 RSDT_RS06310 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010075|IPR029062 Class I glutamine amidotransferase-like|Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 G3DSA:3.40.50.880|PF13507|PIRSF001586|SM01211|SSF52317 RSDT_RS06315 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004468|IPR017456|IPR017926|IPR027417|IPR029062 CTP synthase|CTP synthase, N-terminal|Class I glutamine amidotransferase-like|Glutamine amidotransferase|P-loop containing nucleoside triphosphate hydrolase GO:0003883|GO:0006221 G3DSA:3.40.50.300|G3DSA:3.40.50.880|MF_01227|PF00117|PF06418|SSF52317|SSF52540|TIGR00337 RSDT_RS06325 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000640|IPR000795|IPR004161|IPR005225|IPR006297|IPR013842|IPR027417|IPR031157|IPR035647 EF-G domain III/V-like|Elongation factor 4|Elongation factor EFG, domain V-like|GTP-binding protein LepA, C-terminal|P-loop containing nucleoside triphosphate hydrolase|Small GTP-binding protein domain|Tr-type G domain, conserved site|Transcription factor, GTP-binding domain|Translation elongation factor EFTu-like, domain 2 GO:0003924|GO:0005525 G3DSA:2.40.30.10|G3DSA:3.30.70.240|G3DSA:3.30.70.870|G3DSA:3.40.50.300|MF_00071|PF00009|PF00679|PF03144|PF06421|PR00315|PS00301|SSF52540|SSF54980|TIGR00231|TIGR01393 RSDT_RS06340 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001851|IPR035568 ABC transporter, FecCD/TroCD-like|ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3470.10|PF02653 RSDT_RS06345 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001851|IPR035568 ABC transporter, FecCD/TroCD-like|ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 G3DSA:1.10.3470.10|PF02653 RSDT_RS06350 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR027417|IPR032823 AAA+ ATPase domain|ABC transporter-like|Branched-chain amino acid ATP-binding cassette transporter, C-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PF12399|SM00382|SSF52540 RSDT_RS06355 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003439|IPR003593|IPR017871|IPR027417 AAA+ ATPase domain|ABC transporter, conserved site|ABC transporter-like|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0016887 G3DSA:3.40.50.300|PF00005|PS00211|SM00382|SSF52540 RSDT_RS06360 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007686|IPR026037 Phosphatidylglycerophosphatase A|YutG/PgpA domain GO:0006629|GO:0008962 G3DSA:1.10.3760.10|PF04608|PIRSF006162|SSF101307 RSDT_RS06365 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004368|IPR006196|IPR012340|IPR022967 Nucleic acid-binding, OB-fold|RNA-binding domain, S1|RNA-binding domain, S1, IF1 type|Translation initiation factor IF-1 GO:0003723|GO:0003743|GO:0006413 G3DSA:2.40.50.140|MF_00075|PF01176|SM00316|SSF50249|TIGR00008 RSDT_RS06370 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001412|IPR002300|IPR002301|IPR009008|IPR009080|IPR010663|IPR013155|IPR014729|IPR023585 Aminoacyl-tRNA synthetase, class I, conserved site|Aminoacyl-tRNA synthetase, class Ia|Aminoacyl-tRNA synthetase, class Ia, anticodon-binding|Isoleucine-tRNA ligase|Isoleucine-tRNA ligase, type 1|Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding|Rossmann-like alpha/beta/alpha sandwich fold|Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain|Zinc finger, FPG/IleRS-type GO:0000166|GO:0002161|GO:0004812|GO:0004822|GO:0005524|GO:0005737|GO:0006418|GO:0006428 G3DSA:1.10.730.10|G3DSA:3.30.2320.20|G3DSA:3.40.50.620|G3DSA:3.90.740.10|MF_02002|PF00133|PF06827|PF08264|PR00984|PS00178|SSF47323|SSF50677|SSF52374|TIGR00392 RSDT_RS06375 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MF_00161|PF01252|PR00781|TIGR00077 RSDT_RS06385 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011990|IPR014162|IPR019734|IPR034706 Cell division coordinator CpoB|Cell division coordinator CpoB, C-terminal|Tetratricopeptide repeat|Tetratricopeptide-like helical domain GO:0005515|GO:0051301 G3DSA:1.20.120.330|G3DSA:1.25.40.10|MF_02066|PF13174|PF13432|SM00028|SSF48452|TIGR02795 RSDT_RS06390 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000445|IPR003265|IPR004036|IPR005760|IPR011257|IPR015797|IPR020476|IPR023170|IPR029119 A/G-specific adenine glycosylase MutY|DNA glycosylase|Endonuclease III-like, conserved site-2|Helix-hairpin-helix motif|Helix-turn-helix, base-excision DNA repair, C-terminal|HhH-GPD domain|MutY, C-terminal|NUDIX hydrolase|NUDIX hydrolase domain-like GO:0003677|GO:0003824|GO:0006281|GO:0006284|GO:0016787|GO:0019104 G3DSA:1.10.1670.10|G3DSA:1.10.340.30|G3DSA:3.90.79.10|PF00633|PF00730|PF14815|PR00502|PS01155|SM00478|SSF48150|SSF55811|TIGR01084 RSDT_RS06395 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002130|IPR020892|IPR024936|IPR029000 Cyclophilin-like domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase|Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain|Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0000413|GO:0003755|GO:0006457 G3DSA:2.40.100.10|PF00160|PIRSF001467|PR00153|PS00170|SSF50891 RSDT_RS06400 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000890|IPR004372|IPR023865 Acetate/propionate kinase|Aliphatic acid kinase, short-chain|Aliphatic acid kinase, short-chain, conserved site GO:0005622|GO:0006082|GO:0008152|GO:0016301|GO:0016310|GO:0016774 G3DSA:3.30.420.40|MF_00020|PF00871|PIRSF000722|PR00471|PS01075|SSF53067|TIGR00016 RSDT_RS06405 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002505|IPR004614|IPR010766|IPR016475|IPR027417|IPR028979 DRTGG|HPr(Ser) kinase/phosphorylase, N-terminal domain-like|P-loop containing nucleoside triphosphate hydrolase|Phosphate acetyl/butaryl transferase|Phosphate acetyltransferase|Phosphate acetyltransferase, bacteria GO:0008152|GO:0008959|GO:0016407|GO:0016746 G3DSA:3.40.1390.20|G3DSA:3.40.50.10750|G3DSA:3.40.50.300|PF01515|PF07085|PF13500|PIRSF006107|SSF52540|SSF53659|SSF75138|TIGR00651 RSDT_RS06410 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002869|IPR002880|IPR009014|IPR011766|IPR011895|IPR017900|IPR019456|IPR019752|IPR029061|IPR033412 4Fe-4S ferredoxin, iron-sulphur binding, conserved site|Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal|Pyruvate-flavodoxin oxidoreductase|Pyruvate-flavodoxin oxidoreductase, EKR domain|Pyruvate-flavodoxin oxidoreductase, central domain|Pyruvate/ketoisovalerate oxidoreductase, catalytic domain|Pyruvate:ferredoxin oxidoreductase, core domain II|Thiamin diphosphate-binding fold|Thiamine pyrophosphate enzyme, C-terminal TPP-binding|Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0005506|GO:0008152|GO:0016491|GO:0016903|GO:0022900|GO:0030976|GO:0055114 G3DSA:3.30.70.20|G3DSA:3.40.50.920|G3DSA:3.40.50.970|G3DSA:3.40.920.10|G3DSA:4.10.780.10|PF01558|PF01855|PF02775|PF10371|PF13484|PF17147|PIRSF000159|PS00198|SM00890|SSF52518|SSF52922|SSF53323|SSF54862|TIGR02176 RSDT_RS06415 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000771|IPR011289|IPR013785 Aldolase-type TIM barrel|Fructose-1,6-bisphosphate aldolase, class 2|Fructose-bisphosphate aldolase, class-II GO:0003824|GO:0004332|GO:0005975|GO:0006096|GO:0008270|GO:0016832|GO:0030388 G3DSA:3.20.20.70|PF01116|PIRSF001359|SSF51569|TIGR00167|TIGR01859 RSDT_RS06420 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005144|IPR012833 ATP-cone domain|Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 G3DSA:3.20.70.20|PF03477|PF13597|SSF51998|TIGR02487 RSDT_RS06425 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001989|IPR007197|IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein|Radical SAM|Radical-activating enzyme, conserved site GO:0003824|GO:0016491|GO:0051536|GO:0051539|GO:0055114 G3DSA:3.80.30.10|PF04055|PF13353|PS01087|SSF102114|TIGR02495 RSDT_RS06435 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 G3DSA:3.40.50.1400|PF06180|PIRSF033579|SSF53800 RSDT_RS06465 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004733|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|Phosphoribosylformylglycinamidine cyclo-ligase|PurM-like, N-terminal domain GO:0004641|GO:0005737|GO:0006189 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|MF_00741|PF00586|PF02769|SSF55326|SSF56042|TIGR00878 RSDT_RS06470 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003724|IPR027417 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR|P-loop containing nucleoside triphosphate hydrolase GO:0005524|GO:0008817|GO:0009236 G3DSA:3.40.50.300|PF02572|PIRSF015617|SSF52540 RSDT_RS06480 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007055|IPR014004 BON domain|Transport-associated and nodulation domain, bacteria PF04972|SM00749 RSDT_RS06485 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001986|IPR005750|IPR013792 Enolpyruvate transferase domain|RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta|UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0003824|GO:0008760|GO:0016765|GO:0019277 G3DSA:3.65.10.10|MF_00111|PF00275|SSF55205|TIGR01072 RSDT_RS06505 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001114|IPR018220|IPR027417|IPR033128 Adenylosuccinate synthase, active site|Adenylosuccinate synthase, GTP-binding site|Adenylosuccinate synthetase|P-loop containing nucleoside triphosphate hydrolase GO:0004019|GO:0005525|GO:0006164 G3DSA:3.40.440.10|G3DSA:3.90.170.10|MF_00011|PF00709|PS00513|PS01266|SM00788|SSF52540|TIGR00184 RSDT_RS06510 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR027417 P-loop containing nucleoside triphosphate hydrolase G3DSA:3.40.50.300|PF13177|SSF52540 RSDT_RS06520 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003362|IPR017472|IPR017475 Bacterial sugar transferase|Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase|Undecaprenyl-phosphate galactose phosphotransferase, WbaP GO:0000271|GO:0005886|GO:0016021|GO:0016740 PF02397|TIGR03022|TIGR03025 RSDT_RS06530 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR004299|IPR024194|IPR028362 Alginate O-acetyltransferase AlgI|Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB|Membrane bound O-acyl transferase, MBOAT GO:0042121 PF03062|PIRSF016636|PIRSF500217 RSDT_RS06535 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000119|IPR010992|IPR020816 Histone-like DNA-binding protein|Histone-like DNA-binding protein, conserved site|Integration host factor (IHF)-like DNA-binding domain GO:0003677 G3DSA:4.10.520.10|PF00216|PR01727|PS00045|SM00411|SSF47729 RSDT_RS06540 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006638|IPR007197|IPR013785|IPR032432 Aldolase-type TIM barrel|Elongator protein 3/MiaB/NifB|Radical SAM|Radical SAM, C-terminal extension GO:0003824|GO:0051536 G3DSA:3.20.20.70|PF04055|PF16199|SM00729|SSF102114 RSDT_RS06550 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001048|IPR001057|IPR004662 Acetylglutamate kinase|Aspartate/glutamate/uridylate kinase|Glutamate/acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 G3DSA:3.40.1160.10|MF_00082_B|PF00696|PIRSF000728|PR00474|SSF53633|TIGR00761 RSDT_RS06555 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000924|IPR001412|IPR004527|IPR008925|IPR014729|IPR020058|IPR020061|IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding|Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2|Aminoacyl-tRNA synthetase, class I, conserved site|Glutamate-tRNA ligase, bacterial/mitochondrial|Glutamyl/glutaminyl-tRNA synthetase|Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain|Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain|Rossmann-like alpha/beta/alpha sandwich fold GO:0000049|GO:0000166|GO:0004812|GO:0004818|GO:0005524|GO:0005737|GO:0006418|GO:0006424|GO:0016876|GO:0043039 G3DSA:1.10.10.350|G3DSA:1.10.1160.10|G3DSA:3.40.50.620|MF_00022|PF00749|PR00987|PS00178|SSF48163|SSF52374|TIGR00464 RSDT_RS06560 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001451|IPR011004|IPR018357 Hexapeptide repeat|Hexapeptide transferase, conserved site|Trimeric LpxA-like GO:0016740 G3DSA:2.160.10.10|PF00132|PS00101|SSF51161 RSDT_RS06565 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000534|IPR005986|IPR012080|IPR012280|IPR016040 Aspartate-semialdehyde dehydrogenase|Aspartate-semialdehyde dehydrogenase, beta-type|NAD(P)-binding domain|Semialdehyde dehydrogenase, NAD-binding|Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0004073|GO:0005737|GO:0008652|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0016620|GO:0046983|GO:0050661|GO:0051287|GO:0055114 G3DSA:3.30.360.10|G3DSA:3.40.50.720|MF_02121|PF01118|PF02774|PIRSF000148|SM00859|SSF51735|SSF55347|TIGR01296 RSDT_RS06570 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002312|IPR004364|IPR004365|IPR004522|IPR012340 Aminoacyl-tRNA synthetase, class II (D/K/N)|Asparagine-tRNA ligase|Aspartyl/Asparaginyl-tRNA synthetase, class IIb|Nucleic acid-binding, OB-fold|OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0000166|GO:0003676|GO:0004812|GO:0004816|GO:0005524|GO:0005737|GO:0006418|GO:0006421 G3DSA:2.40.50.140|G3DSA:3.30.930.10|MF_00534|PF00152|PF01336|PR01042|SSF50249|SSF55681|TIGR00457 RSDT_RS06575 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010084|IPR013114|IPR029069 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ|Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ|HotDog domain GO:0005737|GO:0006633|GO:0016836 G3DSA:3.10.129.10|MF_00406|PF07977|SSF54637|TIGR01750 RSDT_RS06580 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005632|IPR024930 Chaperone protein Skp|Skp domain GO:0051082 G3DSA:3.30.910.20|PF03938|SM00935|SSF111384 RSDT_RS06585 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000755|IPR009045 D-alanyl-D-alanine dipeptidase|Hedgehog signalling/DD-peptidase zinc-binding domain GO:0005618|GO:0006508|GO:0008237|GO:0016805 PF01427|SSF55166 RSDT_RS06590 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000291|IPR005905|IPR011095|IPR011127|IPR013815|IPR016185 ATP-grasp fold, subdomain 1|D-alanine--D-alanine ligase|D-alanine--D-alanine ligase, C-terminal|D-alanine--D-alanine ligase, N-terminal domain|D-alanine--D-alanine ligase/VANA/B/C, conserved site|Pre-ATP-grasp domain GO:0003824|GO:0005524|GO:0005737|GO:0008716 G3DSA:3.30.1490.20|G3DSA:3.30.470.20|G3DSA:3.40.50.20|MF_00047|PF01820|PF07478|PIRSF039102|PS00843|PS00844|SSF52440|SSF56059 RSDT_RS06595 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003607|IPR006674|IPR006675 HD domain|HD/PDEase domain|HDIG domain G3DSA:1.10.472.50|PF01966|SM00471|SSF109604|TIGR00277 RSDT_RS06605 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR005126|IPR011031 Multihaem cytochrome|NapC/NirT cytochrome c, N-terminal G3DSA:1.10.3820.10|PF03264|SSF48695 RSDT_RS06610 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003321|IPR011031 Cytochrome c552|Multihaem cytochrome GO:0006807|GO:0042279|GO:0042597|GO:0055114 G3DSA:1.10.1130.10|PF02335|PIRSF000243|SSF48695 RSDT_RS06615 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001455|IPR003787|IPR019870|IPR027396 DsrEFH-like|Selenium metabolism protein YedF|Sulphur relay, DsrE/F-like protein|TusA-like domain G3DSA:3.30.110.40|G3DSA:3.40.1260.10|PF01206|PF02635|SSF64307|SSF75169|TIGR03527 RSDT_RS06635 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR031566 Putative citrate transporter PF16980 RSDT_RS06640 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001537|IPR029026|IPR029028|IPR033671 Alpha/beta knot methyltransferases|tRNA (guanine-N1-)-methyltransferase, N-terminal|tRNA (guanosine(18)-2'-O)-methyltransferase|tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008168|GO:0008173|GO:0030488 G3DSA:3.40.1280.10|MF_02060|PF00588|SSF75217 RSDT_RS06645 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002797 Polysaccharide biosynthesis protein GO:0016020 PF01943 RSDT_RS06650 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic G3DSA:3.40.50.300 RSDT_RS06655 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011991|IPR019888 Transcription regulator AsnC-type|Winged helix-turn-helix DNA-binding domain GO:0003700|GO:0005622|GO:0006355|GO:0043565 G3DSA:1.10.10.10|G3DSA:3.30.70.920|SM00344|SSF46785 RSDT_RS06665 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000504 RNA recognition motif domain GO:0003676 G3DSA:3.30.70.330|PF00076|SM00360|SSF54928 RSDT_RS06670 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007692|IPR007693|IPR007694|IPR016136|IPR027417 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal|DNA helicase, DnaB type|DNA helicase, DnaB-like, C-terminal|DNA helicase, DnaB-like, N-terminal|P-loop containing nucleoside triphosphate hydrolase GO:0003677|GO:0003678|GO:0005524|GO:0006260 G3DSA:1.10.860.10|G3DSA:3.40.50.300|PF00772|PF03796|SSF48024|SSF52540|TIGR00665 RSDT_RS06675 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR009027|IPR020069|IPR020070|IPR020594 Ribosomal protein L9, C-terminal|Ribosomal protein L9, N-terminal|Ribosomal protein L9, bacteria/chloroplast|Ribosomal protein L9/RNase H1, N-terminal GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:3.10.430.100|G3DSA:3.40.5.10|MF_00503|PF01281|PF03948|SSF55653|SSF55658|TIGR00158 RSDT_RS06680 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 G3DSA:4.10.640.10|MF_00270|PD002239|PF01084|PR00974|SSF46911|TIGR00165 RSDT_RS06685 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000529|IPR014717|IPR020814 Ribosomal protein S6|Ribosomal protein S6, plastid/chloroplast|Translation elongation factor EF1B/ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 G3DSA:3.30.70.60|MF_00360|PF01250|SSF54995|TIGR00166 RSDT_RS06700 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006664|IPR006665|IPR014169 OmpA-like domain|Outer membrane protein, bacterial|Peptidoglycan-associated lipoprotein GO:0009279|GO:0016021 G3DSA:3.30.1330.60|PF00691|PR01021|SSF103088|TIGR02802 RSDT_RS06705 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR007195|IPR011659|IPR015943 TolB, N-terminal|WD40-like Beta Propeller|WD40/YVTN repeat-like-containing domain GO:0005515|GO:0015031|GO:0042597 G3DSA:2.130.10.10|G3DSA:2.130.10.150|G3DSA:3.40.50.10070|PF07676|SSF52964|SSF69304 RSDT_RS06710 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006260 TonB, C-terminal GO:0006810 G3DSA:3.30.1150.10|PF13103|SSF74653 RSDT_RS06715 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 PF02472 RSDT_RS06720 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 PF01618 RSDT_RS06725 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001107|IPR001972|IPR010200 Band 7 domain|HflC|Stomatin family GO:0016020|GO:0016021|GO:0052547 PF01145|PIRSF005651|PR00721|SM00244|SSF117892 RSDT_RS06730 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001107|IPR010201 Band 7 domain|HflK GO:0016021 PF01145|SM00244|SSF117892|TIGR01933 RSDT_RS06735 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR013785|IPR033983 Aldolase-type TIM barrel|Thiazole synthase ThiG GO:0003824 G3DSA:3.20.20.70|PF05690|SSF110399 RSDT_RS06740 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003749|IPR010035|IPR012675|IPR016155 Beta-grasp domain|Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp|ThiS, thiamine-biosynthesis|ThiamineS/Molybdopterin converting factor subunit 1 G3DSA:3.10.20.30|PF02597|SSF54285|TIGR01683 RSDT_RS06745 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic PF13358 RSDT_RS06755 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002616|IPR004803 tRNA-guanine transglycosylase|tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0016763|GO:0101030 G3DSA:3.20.20.105|MF_00168|PF01702|SSF51713|TIGR00430|TIGR00449 RSDT_RS06760 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000821|IPR001608|IPR009006|IPR011079|IPR020622|IPR029066 Alanine racemase|Alanine racemase, C-terminal|Alanine racemase, N-terminal|Alanine racemase, pyridoxal-phosphate attachment site|Alanine racemase/group IV decarboxylase, C-terminal|PLP-binding barrel GO:0003824|GO:0006522|GO:0008784 G3DSA:2.40.37.10|G3DSA:3.20.20.10|MF_01201|PF00842|PF01168|PR00992|PS00395|SM01005|SSF50621|SSF51419|TIGR00492 RSDT_RS06765 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003369|IPR003998|IPR006312 Sec-independent protein translocase protein TatA/B/E|Sec-independent protein translocase protein TatA/E|Twin-arginine translocation protein TatB-like GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016020|GO:0016021 MF_00236|PF02416|PR01506|TIGR01411 RSDT_RS06775 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR011032|IPR018369|IPR020818 Chaperonin GroES, conserved site|GroES chaperonin family|GroES-like GO:0005524|GO:0005737|GO:0006457 G3DSA:2.30.33.40|MF_00580|PF00166|PR00297|PS00681|SM00883|SSF50129 RSDT_RS06780 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001844|IPR002423|IPR018370|IPR027409|IPR027413 Chaperonin Cpn60|Chaperonin Cpn60, conserved site|Chaperonin Cpn60/TCP-1 family|GroEL-like apical domain|GroEL-like equatorial domain GO:0005524|GO:0005737|GO:0006457|GO:0042026 G3DSA:1.10.560.10|G3DSA:3.50.7.10|MF_00600|PF00118|PR00298|PS00296|SSF48592|SSF52029|SSF54849|TIGR02348 RSDT_RS06785 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR006283|IPR010918|IPR016188 AIR synthase-related protein, C-terminal domain|PurM-like, N-terminal domain|Thiamine-monophosphate kinase GO:0009030|GO:0009228 G3DSA:3.30.1330.10|G3DSA:3.90.650.10|PF00586|PIRSF005303|SSF55326|SSF56042|TIGR01379 RSDT_RS06790 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR014017|IPR027417|IPR034739 P-loop containing nucleoside triphosphate hydrolase|UvrD-like DNA helicase, C-terminal|UvrD/AddA helicase, N-terminal GO:0005524|GO:0016787 G3DSA:3.40.50.300|PF00580|PF13361|SSF52540 RSDT_RS06795 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001109|IPR019812 Hydrogenase assembly chaperone, conserved site|Hydrogenase expression/formation protein, HupF/HypC PF01455|PR00445|PS01097|SSF159127|TIGR00074 RSDT_RS06800 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR010918|IPR011854|IPR016188 AIR synthase-related protein, C-terminal domain|Hydrogenase expression/formation protein HypE|PurM-like, N-terminal domain G3DSA:3.30.1330.10|G3DSA:3.90.650.10|PF00586|PF02769|PIRSF005644|SSF55326|SSF56042|TIGR02124 RSDT_RS06805 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002780 Hydrogenase formation HypD protein GO:0046872 PF01924|PIRSF005622|TIGR00075 RSDT_RS06810 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR008089|IPR016040 NAD(P)-binding domain|Nucleotide sugar epimerase GO:0005975|GO:0016857 G3DSA:3.40.50.720|G3DSA:3.90.25.10|PF16363|PR01713|SSF51735 RSDT_RS06815 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000905|IPR022496 Gcp-like domain|tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 G3DSA:3.30.420.40|PF00814|SSF53067|TIGR03725 RSDT_RS06820 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001478|IPR004387|IPR008915 PDZ domain|Peptidase M50|Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0005515|GO:0006508|GO:0016021 G3DSA:2.30.42.10|PF02163|PF13180|SM00228|SSF50156|TIGR00054 RSDT_RS06825 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003821|IPR013512|IPR013644|IPR016040|IPR026877 1-deoxy-D-xylulose 5-phosphate reductoisomerase|1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal|1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal|DXP reductoisomerase C-terminal domain|NAD(P)-binding domain GO:0005515|GO:0008299|GO:0030604|GO:0046872|GO:0055114|GO:0070402 G3DSA:1.10.1740.10|G3DSA:3.40.50.720|MF_00183|PF02670|PF08436|PF13288|PIRSF006205|SSF51735|SSF55347|SSF69055|TIGR00243 RSDT_RS06830 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 PF01148|PS01315 RSDT_RS06835 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR001441|IPR018520 Decaprenyl diphosphate synthase-like|Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 G3DSA:3.40.1180.10|MF_01139|PF01255|PS01066|SSF64005|TIGR00055 RSDT_RS06845 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR003777|IPR023753|IPR027051 FAD/NAD(P)-binding domain|XdhC Rossmann domain|XdhC- CoxI GO:0016491|GO:0055114 G3DSA:3.40.50.720|PF02625|PF13478|SSF51905 RSDT_RS06855 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002176|IPR012337|IPR020563 Crossover junction endodeoxyribonuclease RuvC|Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site|Ribonuclease H-like domain GO:0003676|GO:0004520|GO:0006281|GO:0006310|GO:0008821 G3DSA:3.30.420.10|MF_00034|PF02075|PR00696|PS01321|SSF53098|TIGR00228 RSDT_RS06860 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002876|IPR017856|IPR026564|IPR029072 Integrase, N-terminal zinc-binding domain-like|Transcriptional regulator TACO1-like|Transcriptional regulator TACO1-like, domain 3|YebC-like G3DSA:1.10.10.200|G3DSA:3.30.70.980|MF_00693|PF01709|SSF75625|TIGR01033 RSDT_RS06865 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR002877|IPR015507|IPR029063 Ribosomal RNA large subunit methyltransferase E|Ribosomal RNA methyltransferase FtsJ domain|S-adenosyl-L-methionine-dependent methyltransferase GO:0001510|GO:0008168|GO:0032259 G3DSA:3.40.50.150|MF_01547|PF01728|PIRSF005461|SSF53335 RSDT_RS06870 /data/g2d_mirror/Candidatus_Desulfovibrio_trichonymphae_Rs-N31/ASM235595v1_genomic IPR025668 Transposase DDE domain PF13586