##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM321356v1 #!genome-build-accession NCBI_Assembly:GCF_003213565.1 #!annotation-date 10/05/2022 17:59:20 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP029020.1 1 276765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=336810 NZ_CP029020.1 RefSeq region 1 276765 . + . ID=NZ_CP029020.1:1..276765;Dbxref=taxon:336810;Is_circular=true;Name=ANONYMOUS;collected-by=Yu Matsuura;collection-date=2015-08-09;country=Japan: Hokkaido%2C Sapporo;gbkey=Src;genome=chromosome;isolate=SMAURBIH;mol_type=genomic DNA;nat-host=Auritibicen bihamatus NZ_CP029020.1 RefSeq gene 1 675 . + . ID=gene-DDE35_RS00005;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=DDE35_RS00005 NZ_CP029020.1 Protein Homology CDS 1 675 . + 0 ID=cds-WP_110504205.1;Parent=gene-DDE35_RS00005;Dbxref=Genbank:WP_110504205.1;Name=WP_110504205.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315467.1;locus_tag=DDE35_RS00005;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_110504205.1;transl_table=11 NZ_CP029020.1 RefSeq gene 672 1826 . - . ID=gene-DDE35_RS00010;Name=DDE35_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00010 NZ_CP029020.1 Protein Homology CDS 672 1826 . - 0 ID=cds-WP_110504207.1;Parent=gene-DDE35_RS00010;Dbxref=Genbank:WP_110504207.1;Name=WP_110504207.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012432.2;locus_tag=DDE35_RS00010;product=lyase family protein;protein_id=WP_110504207.1;transl_table=11 NZ_CP029020.1 RefSeq gene 1887 3530 . + . ID=gene-DDE35_RS00015;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=DDE35_RS00015 NZ_CP029020.1 Protein Homology CDS 1887 3530 . + 0 ID=cds-WP_110504524.1;Parent=gene-DDE35_RS00015;Dbxref=Genbank:WP_110504524.1;Name=WP_110504524.1;Ontology_term=GO:0051205,GO:0003674;gbkey=CDS;gene=yidC;go_function=molecular_function|0003674||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315468.1;locus_tag=DDE35_RS00015;product=membrane protein insertase YidC;protein_id=WP_110504524.1;transl_table=11 NZ_CP029020.1 RefSeq gene 3527 6151 . + . ID=gene-DDE35_RS00020;Name=DDE35_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00020 NZ_CP029020.1 Protein Homology CDS 3527 6151 . + 0 ID=cds-WP_110504209.1;Parent=gene-DDE35_RS00020;Dbxref=Genbank:WP_110504209.1;Name=WP_110504209.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012221049.1;locus_tag=DDE35_RS00020;product=valine--tRNA ligase;protein_id=WP_110504209.1;transl_table=11 NZ_CP029020.1 RefSeq gene 6132 7247 . + . ID=gene-DDE35_RS00025;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=DDE35_RS00025 NZ_CP029020.1 Protein Homology CDS 6132 7247 . + 0 ID=cds-WP_110504211.1;Parent=gene-DDE35_RS00025;Dbxref=Genbank:WP_110504211.1;Name=WP_110504211.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783985.1;locus_tag=DDE35_RS00025;product=DNA polymerase III subunit beta;protein_id=WP_110504211.1;transl_table=11 NZ_CP029020.1 RefSeq gene 7244 9262 . + . ID=gene-DDE35_RS00030;Name=DDE35_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00030 NZ_CP029020.1 Protein Homology CDS 7244 9262 . + 0 ID=cds-WP_110504213.1;Parent=gene-DDE35_RS00030;Dbxref=Genbank:WP_110504213.1;Name=WP_110504213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783986.1;locus_tag=DDE35_RS00030;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_110504213.1;transl_table=11 NZ_CP029020.1 RefSeq gene 9267 10361 . + . ID=gene-DDE35_RS00035;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=DDE35_RS00035 NZ_CP029020.1 Protein Homology CDS 9267 10361 . + 0 ID=cds-WP_110504216.1;Parent=gene-DDE35_RS00035;Dbxref=Genbank:WP_110504216.1;Name=WP_110504216.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783987.1;locus_tag=DDE35_RS00035;product=3-dehydroquinate synthase;protein_id=WP_110504216.1;transl_table=11 NZ_CP029020.1 RefSeq gene 10578 11489 . - . ID=gene-DDE35_RS00040;Name=DDE35_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00040 NZ_CP029020.1 Protein Homology CDS 10578 11489 . - 0 ID=cds-WP_110504217.1;Parent=gene-DDE35_RS00040;Dbxref=Genbank:WP_110504217.1;Name=WP_110504217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DDE35_RS00040;product=HD domain-containing protein;protein_id=WP_110504217.1;transl_table=11 NZ_CP029020.1 RefSeq gene 11491 12591 . - . ID=gene-DDE35_RS00045;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=DDE35_RS00045 NZ_CP029020.1 Protein Homology CDS 11491 12591 . - 0 ID=cds-WP_110504219.1;Parent=gene-DDE35_RS00045;Dbxref=Genbank:WP_110504219.1;Name=WP_110504219.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014246445.1;locus_tag=DDE35_RS00045;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_110504219.1;transl_table=11 NZ_CP029020.1 RefSeq gene 12588 13673 . - . ID=gene-DDE35_RS00050;Name=DDE35_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00050 NZ_CP029020.1 Protein Homology CDS 12588 13673 . - 0 ID=cds-WP_110479941.1;Parent=gene-DDE35_RS00050;Dbxref=Genbank:WP_110479941.1;Name=WP_110479941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784068.1;locus_tag=DDE35_RS00050;product=DnaJ domain-containing protein;protein_id=WP_110479941.1;transl_table=11 NZ_CP029020.1 RefSeq gene 13692 13871 . - . ID=gene-DDE35_RS00055;Name=DDE35_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00055 NZ_CP029020.1 GeneMarkS-2+ CDS 13692 13871 . - 0 ID=cds-WP_110479943.1;Parent=gene-DDE35_RS00055;Dbxref=Genbank:WP_110479943.1;Name=WP_110479943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE35_RS00055;product=hypothetical protein;protein_id=WP_110479943.1;transl_table=11 NZ_CP029020.1 RefSeq gene 13891 15159 . + . ID=gene-DDE35_RS00060;Name=DDE35_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00060 NZ_CP029020.1 Protein Homology CDS 13891 15159 . + 0 ID=cds-WP_110504221.1;Parent=gene-DDE35_RS00060;Dbxref=Genbank:WP_110504221.1;Name=WP_110504221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784069.1;locus_tag=DDE35_RS00060;product=HDIG domain-containing protein;protein_id=WP_110504221.1;transl_table=11 NZ_CP029020.1 RefSeq gene 15188 16591 . + . ID=gene-DDE35_RS00065;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=DDE35_RS00065 NZ_CP029020.1 Protein Homology CDS 15188 16591 . + 0 ID=cds-WP_110504223.1;Parent=gene-DDE35_RS00065;Dbxref=Genbank:WP_110504223.1;Name=WP_110504223.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220989.1;locus_tag=DDE35_RS00065;product=dihydrolipoyl dehydrogenase;protein_id=WP_110504223.1;transl_table=11 NZ_CP029020.1 RefSeq gene 16595 17941 . + . ID=gene-DDE35_RS00070;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=DDE35_RS00070 NZ_CP029020.1 Protein Homology CDS 16595 17941 . + 0 ID=cds-WP_110504225.1;Parent=gene-DDE35_RS00070;Dbxref=Genbank:WP_110504225.1;Name=WP_110504225.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=dnaB;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784071.1;locus_tag=DDE35_RS00070;product=replicative DNA helicase;protein_id=WP_110504225.1;transl_table=11 NZ_CP029020.1 RefSeq gene 17952 18926 . + . ID=gene-DDE35_RS00075;Name=DDE35_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00075 NZ_CP029020.1 Protein Homology CDS 17952 18926 . + 0 ID=cds-WP_110504227.1;Parent=gene-DDE35_RS00075;Dbxref=Genbank:WP_110504227.1;Name=WP_110504227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784072.1;locus_tag=DDE35_RS00075;product=M42 family peptidase;protein_id=WP_110504227.1;transl_table=11 NZ_CP029020.1 RefSeq gene 18928 19308 . - . ID=gene-DDE35_RS00080;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=DDE35_RS00080 NZ_CP029020.1 Protein Homology CDS 18928 19308 . - 0 ID=cds-WP_110479953.1;Parent=gene-DDE35_RS00080;Dbxref=Genbank:WP_110479953.1;Name=WP_110479953.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:TIGR00082.1;locus_tag=DDE35_RS00080;product=30S ribosome-binding factor RbfA;protein_id=WP_110479953.1;transl_table=11 NZ_CP029020.1 RefSeq gene 19371 20369 . + . ID=gene-DDE35_RS00085;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=DDE35_RS00085 NZ_CP029020.1 Protein Homology CDS 19371 20369 . + 0 ID=cds-WP_110504229.1;Parent=gene-DDE35_RS00085;Dbxref=Genbank:WP_110504229.1;Name=WP_110504229.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784074.1;locus_tag=DDE35_RS00085;product=phosphate acetyltransferase;protein_id=WP_110504229.1;transl_table=11 NZ_CP029020.1 RefSeq gene 20366 21556 . + . ID=gene-DDE35_RS00090;Name=DDE35_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00090 NZ_CP029020.1 Protein Homology CDS 20366 21556 . + 0 ID=cds-WP_110504231.1;Parent=gene-DDE35_RS00090;Dbxref=Genbank:WP_110504231.1;Name=WP_110504231.1;Ontology_term=GO:0006083,GO:0006113,GO:0008776,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acetate kinase activity|0008776||IEA;go_process=acetate metabolic process|0006083||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015360588.1;locus_tag=DDE35_RS00090;product=acetate/propionate family kinase;protein_id=WP_110504231.1;transl_table=11 NZ_CP029020.1 RefSeq gene 21561 22931 . + . ID=gene-DDE35_RS00095;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=DDE35_RS00095 NZ_CP029020.1 Protein Homology CDS 21561 22931 . + 0 ID=cds-WP_110504232.1;Parent=gene-DDE35_RS00095;Dbxref=Genbank:WP_110504232.1;Name=WP_110504232.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220986.1;locus_tag=DDE35_RS00095;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_110504232.1;transl_table=11 NZ_CP029020.1 RefSeq gene 22946 23020 . + . ID=gene-DDE35_RS00100;Name=DDE35_RS00100;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00100 NZ_CP029020.1 tRNAscan-SE tRNA 22946 23020 . + . ID=rna-DDE35_RS00100;Parent=gene-DDE35_RS00100;anticodon=(pos:22981..22983);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00100;product=tRNA-Val NZ_CP029020.1 tRNAscan-SE exon 22946 23020 . + . ID=exon-DDE35_RS00100-1;Parent=rna-DDE35_RS00100;anticodon=(pos:22981..22983);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00100;product=tRNA-Val NZ_CP029020.1 RefSeq gene 23065 27297 . + . ID=gene-DDE35_RS00105;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=DDE35_RS00105 NZ_CP029020.1 Protein Homology CDS 23065 27297 . + 0 ID=cds-WP_110504234.1;Parent=gene-DDE35_RS00105;Dbxref=Genbank:WP_110504234.1;Name=WP_110504234.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784077.1;locus_tag=DDE35_RS00105;product=DNA polymerase III subunit alpha;protein_id=WP_110504234.1;transl_table=11 NZ_CP029020.1 RefSeq gene 27320 29137 . + . ID=gene-DDE35_RS00110;Name=DDE35_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00110 NZ_CP029020.1 Protein Homology CDS 27320 29137 . + 0 ID=cds-WP_110504236.1;Parent=gene-DDE35_RS00110;Dbxref=Genbank:WP_110504236.1;Name=WP_110504236.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038540.1;locus_tag=DDE35_RS00110;product=argininosuccinate synthase;protein_id=WP_110504236.1;transl_table=11 NZ_CP029020.1 RefSeq gene 29130 30101 . + . ID=gene-DDE35_RS00115;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=DDE35_RS00115 NZ_CP029020.1 Protein Homology CDS 29130 30101 . + 0 ID=cds-WP_110504237.1;Parent=gene-DDE35_RS00115;Dbxref=Genbank:WP_110504237.1;Name=WP_110504237.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220983.1;locus_tag=DDE35_RS00115;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_110504237.1;transl_table=11 NZ_CP029020.1 RefSeq gene 30111 31256 . + . ID=gene-DDE35_RS00120;Name=DDE35_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00120 NZ_CP029020.1 Protein Homology CDS 30111 31256 . + 0 ID=cds-WP_110504239.1;Parent=gene-DDE35_RS00120;Dbxref=Genbank:WP_110504239.1;Name=WP_110504239.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315576.1;locus_tag=DDE35_RS00120;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_110504239.1;transl_table=11 NZ_CP029020.1 RefSeq gene 31246 32337 . + . ID=gene-DDE35_RS00125;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=DDE35_RS00125 NZ_CP029020.1 Protein Homology CDS 31246 32337 . + 0 ID=cds-WP_110504241.1;Parent=gene-DDE35_RS00125;Dbxref=Genbank:WP_110504241.1;Name=WP_110504241.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012840844.1;locus_tag=DDE35_RS00125;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_110504241.1;transl_table=11 NZ_CP029020.1 RefSeq gene 32334 35525 . + . ID=gene-DDE35_RS00130;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=DDE35_RS00130 NZ_CP029020.1 Protein Homology CDS 32334 35525 . + 0 ID=cds-WP_110504243.1;Parent=gene-DDE35_RS00130;Dbxref=Genbank:WP_110504243.1;Name=WP_110504243.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carB;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784082.1;locus_tag=DDE35_RS00130;product=carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit;protein_id=WP_110504243.1;transl_table=11 NZ_CP029020.1 RefSeq gene 35540 36478 . + . ID=gene-DDE35_RS00135;Name=DDE35_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00135 NZ_CP029020.1 Protein Homology CDS 35540 36478 . + 0 ID=cds-WP_110504526.1;Parent=gene-DDE35_RS00135;Dbxref=Genbank:WP_110504526.1;Name=WP_110504526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784083.1;locus_tag=DDE35_RS00135;product=acetylornithine carbamoyltransferase;protein_id=WP_110504526.1;transl_table=11 NZ_CP029020.1 RefSeq gene 36475 37251 . + . ID=gene-DDE35_RS00140;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=DDE35_RS00140 NZ_CP029020.1 Protein Homology CDS 36475 37251 . + 0 ID=cds-WP_110504245.1;Parent=gene-DDE35_RS00140;Dbxref=Genbank:WP_110504245.1;Name=WP_110504245.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784084.1;locus_tag=DDE35_RS00140;product=acetylglutamate kinase;protein_id=WP_110504245.1;transl_table=11 NZ_CP029020.1 RefSeq gene 37239 38312 . + . ID=gene-DDE35_RS00145;Name=DDE35_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00145 NZ_CP029020.1 Protein Homology CDS 37239 38312 . + 0 ID=cds-WP_110504247.1;Parent=gene-DDE35_RS00145;Dbxref=Genbank:WP_110504247.1;Name=WP_110504247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821471.1;locus_tag=DDE35_RS00145;product=M20 family metallo-hydrolase;protein_id=WP_110504247.1;transl_table=11 NZ_CP029020.1 RefSeq gene 38303 38376 . + . ID=gene-DDE35_RS00150;Name=DDE35_RS00150;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00150 NZ_CP029020.1 tRNAscan-SE tRNA 38303 38376 . + . ID=rna-DDE35_RS00150;Parent=gene-DDE35_RS00150;anticodon=(pos:38337..38339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00150;product=tRNA-Asp NZ_CP029020.1 tRNAscan-SE exon 38303 38376 . + . ID=exon-DDE35_RS00150-1;Parent=rna-DDE35_RS00150;anticodon=(pos:38337..38339);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00150;product=tRNA-Asp NZ_CP029020.1 RefSeq gene 38428 38500 . - . ID=gene-DDE35_RS00155;Name=DDE35_RS00155;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00155 NZ_CP029020.1 tRNAscan-SE tRNA 38428 38500 . - . ID=rna-DDE35_RS00155;Parent=gene-DDE35_RS00155;anticodon=(pos:complement(38465..38467));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00155;product=tRNA-Lys NZ_CP029020.1 tRNAscan-SE exon 38428 38500 . - . ID=exon-DDE35_RS00155-1;Parent=rna-DDE35_RS00155;anticodon=(pos:complement(38465..38467));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00155;product=tRNA-Lys NZ_CP029020.1 RefSeq gene 38549 39061 . + . ID=gene-DDE35_RS00160;Name=DDE35_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00160 NZ_CP029020.1 Protein Homology CDS 38549 39061 . + 0 ID=cds-WP_110504249.1;Parent=gene-DDE35_RS00160;Dbxref=Genbank:WP_110504249.1;Name=WP_110504249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784086.1;locus_tag=DDE35_RS00160;product=shikimate kinase;protein_id=WP_110504249.1;transl_table=11 NZ_CP029020.1 RefSeq gene 39398 40714 . + . ID=gene-DDE35_RS00165;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=DDE35_RS00165 NZ_CP029020.1 Protein Homology CDS 39398 40714 . + 0 ID=cds-WP_110504528.1;Parent=gene-DDE35_RS00165;Dbxref=Genbank:WP_110504528.1;Name=WP_110504528.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784087.1;locus_tag=DDE35_RS00165;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_110504528.1;transl_table=11 NZ_CP029020.1 RefSeq gene 40697 41443 . - . ID=gene-DDE35_RS00170;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=DDE35_RS00170 NZ_CP029020.1 Protein Homology CDS 40697 41443 . - 0 ID=cds-WP_110504252.1;Parent=gene-DDE35_RS00170;Dbxref=Genbank:WP_110504252.1;Name=WP_110504252.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784088.1;locus_tag=DDE35_RS00170;product=tryptophan synthase subunit alpha;protein_id=WP_110504252.1;transl_table=11 NZ_CP029020.1 RefSeq gene 41440 43236 . - . ID=gene-DDE35_RS00175;Name=DDE35_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00175 NZ_CP029020.1 Protein Homology CDS 41440 43236 . - 0 ID=cds-WP_110504254.1;Parent=gene-DDE35_RS00175;Dbxref=Genbank:WP_110504254.1;Name=WP_110504254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784089.1;locus_tag=DDE35_RS00175;product=bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta;protein_id=WP_110504254.1;transl_table=11 NZ_CP029020.1 RefSeq gene 43196 44005 . - . ID=gene-DDE35_RS00180;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=DDE35_RS00180 NZ_CP029020.1 Protein Homology CDS 43196 44005 . - 0 ID=cds-WP_110504256.1;Parent=gene-DDE35_RS00180;Dbxref=Genbank:WP_110504256.1;Name=WP_110504256.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784090.1;locus_tag=DDE35_RS00180;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_110504256.1;transl_table=11 NZ_CP029020.1 RefSeq gene 44020 45006 . - . ID=gene-DDE35_RS00185;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=DDE35_RS00185 NZ_CP029020.1 Protein Homology CDS 44020 45006 . - 0 ID=cds-WP_110504530.1;Parent=gene-DDE35_RS00185;Dbxref=Genbank:WP_110504530.1;Name=WP_110504530.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784091.1;locus_tag=DDE35_RS00185;product=anthranilate phosphoribosyltransferase;protein_id=WP_110504530.1;transl_table=11 NZ_CP029020.1 RefSeq gene 45003 45575 . - . ID=gene-DDE35_RS00190;Name=DDE35_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00190 NZ_CP029020.1 Protein Homology CDS 45003 45575 . - 0 ID=cds-WP_110504258.1;Parent=gene-DDE35_RS00190;Dbxref=Genbank:WP_110504258.1;Name=WP_110504258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784092.1;locus_tag=DDE35_RS00190;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_110504258.1;transl_table=11 NZ_CP029020.1 RefSeq gene 45572 46987 . - . ID=gene-DDE35_RS00195;Name=DDE35_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00195 NZ_CP029020.1 Protein Homology CDS 45572 46987 . - 0 ID=cds-WP_110504260.1;Parent=gene-DDE35_RS00195;Dbxref=Genbank:WP_110504260.1;Name=WP_110504260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784093.1;locus_tag=DDE35_RS00195;product=anthranilate synthase component I family protein;protein_id=WP_110504260.1;transl_table=11 NZ_CP029020.1 RefSeq gene 47108 48574 . - . ID=gene-DDE35_RS00200;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=DDE35_RS00200 NZ_CP029020.1 Protein Homology CDS 47108 48574 . - 0 ID=cds-WP_110504262.1;Parent=gene-DDE35_RS00200;Dbxref=Genbank:WP_110504262.1;Name=WP_110504262.1;Ontology_term=GO:0006433,GO:0004827;gbkey=CDS;gene=proS;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784094.1;locus_tag=DDE35_RS00200;product=proline--tRNA ligase;protein_id=WP_110504262.1;transl_table=11 NZ_CP029020.1 RefSeq gene 48661 51069 . + . ID=gene-DDE35_RS00205;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=DDE35_RS00205 NZ_CP029020.1 Protein Homology CDS 48661 51069 . + 0 ID=cds-WP_110504532.1;Parent=gene-DDE35_RS00205;Dbxref=Genbank:WP_110504532.1;Name=WP_110504532.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799416.1;locus_tag=DDE35_RS00205;product=endopeptidase La;protein_id=WP_110504532.1;transl_table=11 NZ_CP029020.1 RefSeq gene 51089 52294 . + . ID=gene-DDE35_RS00210;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=DDE35_RS00210 NZ_CP029020.1 Protein Homology CDS 51089 52294 . + 0 ID=cds-WP_110504263.1;Parent=gene-DDE35_RS00210;Dbxref=Genbank:WP_110504263.1;Name=WP_110504263.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799417.1;locus_tag=DDE35_RS00210;product=diaminopimelate decarboxylase;protein_id=WP_110504263.1;transl_table=11 NZ_CP029020.1 RefSeq gene 52294 52379 . + . ID=gene-DDE35_RS00215;Name=DDE35_RS00215;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00215 NZ_CP029020.1 tRNAscan-SE tRNA 52294 52379 . + . ID=rna-DDE35_RS00215;Parent=gene-DDE35_RS00215;anticodon=(pos:52328..52330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00215;product=tRNA-Ser NZ_CP029020.1 tRNAscan-SE exon 52294 52379 . + . ID=exon-DDE35_RS00215-1;Parent=rna-DDE35_RS00215;anticodon=(pos:52328..52330);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00215;product=tRNA-Ser NZ_CP029020.1 RefSeq gene 52420 53490 . + . ID=gene-DDE35_RS00220;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=DDE35_RS00220 NZ_CP029020.1 Protein Homology CDS 52420 53490 . + 0 ID=cds-WP_110480341.1;Parent=gene-DDE35_RS00220;Dbxref=Genbank:WP_110480341.1;Name=WP_110480341.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220968.1;locus_tag=DDE35_RS00220;product=chorismate synthase;protein_id=WP_110480341.1;transl_table=11 NZ_CP029020.1 RefSeq gene 53496 55331 . + . ID=gene-DDE35_RS00225;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=DDE35_RS00225 NZ_CP029020.1 Protein Homology CDS 53496 55331 . + 0 ID=cds-WP_110504266.1;Parent=gene-DDE35_RS00225;Dbxref=Genbank:WP_110504266.1;Name=WP_110504266.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799419.1;locus_tag=DDE35_RS00225;product=molecular chaperone HtpG;protein_id=WP_110504266.1;transl_table=11 NZ_CP029020.1 RefSeq gene 55328 56638 . - . ID=gene-DDE35_RS00230;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=DDE35_RS00230 NZ_CP029020.1 Protein Homology CDS 55328 56638 . - 0 ID=cds-WP_110504268.1;Parent=gene-DDE35_RS00230;Dbxref=Genbank:WP_110504268.1;Name=WP_110504268.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799420.1;locus_tag=DDE35_RS00230;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_110504268.1;transl_table=11 NZ_CP029020.1 RefSeq gene 56625 59795 . - . ID=gene-DDE35_RS00235;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=DDE35_RS00235 NZ_CP029020.1 Protein Homology CDS 56625 59795 . - 0 ID=cds-WP_110504270.1;Parent=gene-DDE35_RS00235;Dbxref=Genbank:WP_110504270.1;Name=WP_110504270.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B in some organisms%2C there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799421.1;locus_tag=DDE35_RS00235;product=preprotein translocase subunit SecA;protein_id=WP_110504270.1;transl_table=11 NZ_CP029020.1 RefSeq gene 59858 60226 . + . ID=gene-DDE35_RS00240;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=DDE35_RS00240 NZ_CP029020.1 Protein Homology CDS 59858 60226 . + 0 ID=cds-WP_110504272.1;Parent=gene-DDE35_RS00240;Dbxref=Genbank:WP_110504272.1;Name=WP_110504272.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799422.1;locus_tag=DDE35_RS00240;product=50S ribosomal protein L19;protein_id=WP_110504272.1;transl_table=11 NZ_CP029020.1 RefSeq gene 60195 60557 . + . ID=gene-DDE35_RS00245;Name=DDE35_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00245 NZ_CP029020.1 Protein Homology CDS 60195 60557 . + 0 ID=cds-WP_110504274.1;Parent=gene-DDE35_RS00245;Dbxref=Genbank:WP_110504274.1;Name=WP_110504274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799423.1;locus_tag=DDE35_RS00245;product=4Fe-4S binding protein;protein_id=WP_110504274.1;transl_table=11 NZ_CP029020.1 RefSeq gene 60587 62092 . + . ID=gene-DDE35_RS00250;Name=DDE35_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00250 NZ_CP029020.1 Protein Homology CDS 60587 62092 . + 0 ID=cds-WP_110504534.1;Parent=gene-DDE35_RS00250;Dbxref=Genbank:WP_110504534.1;Name=WP_110504534.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799424.1;locus_tag=DDE35_RS00250;product=glycine--tRNA ligase;protein_id=WP_110504534.1;transl_table=11 NZ_CP029020.1 RefSeq gene 62092 62997 . + . ID=gene-DDE35_RS00255;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=DDE35_RS00255 NZ_CP029020.1 Protein Homology CDS 62092 62997 . + 0 ID=cds-WP_110504276.1;Parent=gene-DDE35_RS00255;Dbxref=Genbank:WP_110504276.1;Name=WP_110504276.1;Ontology_term=GO:0009234,GO:0046428;gbkey=CDS;gene=menA;go_function=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799425.1;locus_tag=DDE35_RS00255;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_110504276.1;transl_table=11 NZ_CP029020.1 RefSeq gene 62992 64305 . - . ID=gene-DDE35_RS00260;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=DDE35_RS00260 NZ_CP029020.1 Protein Homology CDS 62992 64305 . - 0 ID=cds-WP_110480006.1;Parent=gene-DDE35_RS00260;Dbxref=Genbank:WP_110480006.1;Name=WP_110480006.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220961.1;locus_tag=DDE35_RS00260;product=threonine synthase;protein_id=WP_110480006.1;transl_table=11 NZ_CP029020.1 RefSeq gene 64309 65244 . - . ID=gene-DDE35_RS00265;Name=DDE35_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00265 NZ_CP029020.1 Protein Homology CDS 64309 65244 . - 0 ID=cds-WP_110504278.1;Parent=gene-DDE35_RS00265;Dbxref=Genbank:WP_110504278.1;Name=WP_110504278.1;Ontology_term=GO:0006566,GO:0004413,GO:0005524;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine metabolic process|0006566||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315597.1;locus_tag=DDE35_RS00265;product=homoserine kinase;protein_id=WP_110504278.1;transl_table=11 NZ_CP029020.1 RefSeq gene 65246 67657 . - . ID=gene-DDE35_RS00270;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=DDE35_RS00270 NZ_CP029020.1 Protein Homology CDS 65246 67657 . - 0 ID=cds-WP_110504280.1;Parent=gene-DDE35_RS00270;Dbxref=Genbank:WP_110504280.1;Name=WP_110504280.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799428.1;locus_tag=DDE35_RS00270;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_110504280.1;transl_table=11 NZ_CP029020.1 RefSeq gene 67684 67756 . - . ID=gene-DDE35_RS00275;Name=DDE35_RS00275;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00275 NZ_CP029020.1 tRNAscan-SE tRNA 67684 67756 . - . ID=rna-DDE35_RS00275;Parent=gene-DDE35_RS00275;anticodon=(pos:complement(67721..67723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00275;product=tRNA-Arg NZ_CP029020.1 tRNAscan-SE exon 67684 67756 . - . ID=exon-DDE35_RS00275-1;Parent=rna-DDE35_RS00275;anticodon=(pos:complement(67721..67723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00275;product=tRNA-Arg NZ_CP029020.1 RefSeq gene 67840 67914 . - . ID=gene-DDE35_RS00280;Name=DDE35_RS00280;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00280 NZ_CP029020.1 tRNAscan-SE tRNA 67840 67914 . - . ID=rna-DDE35_RS00280;Parent=gene-DDE35_RS00280;anticodon=(pos:complement(67877..67879));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00280;product=tRNA-Pro NZ_CP029020.1 tRNAscan-SE exon 67840 67914 . - . ID=exon-DDE35_RS00280-1;Parent=rna-DDE35_RS00280;anticodon=(pos:complement(67877..67879));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00280;product=tRNA-Pro NZ_CP029020.1 RefSeq gene 67918 68000 . - . ID=gene-DDE35_RS00285;Name=DDE35_RS00285;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00285 NZ_CP029020.1 tRNAscan-SE tRNA 67918 68000 . - . ID=rna-DDE35_RS00285;Parent=gene-DDE35_RS00285;anticodon=(pos:complement(67964..67966));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00285;product=tRNA-Ser NZ_CP029020.1 tRNAscan-SE exon 67918 68000 . - . ID=exon-DDE35_RS00285-1;Parent=rna-DDE35_RS00285;anticodon=(pos:complement(67964..67966));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00285;product=tRNA-Ser NZ_CP029020.1 RefSeq gene 68029 68700 . - . ID=gene-DDE35_RS00290;Name=DDE35_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00290 NZ_CP029020.1 Protein Homology CDS 68029 68700 . - 0 ID=cds-WP_110504282.1;Parent=gene-DDE35_RS00290;Dbxref=Genbank:WP_110504282.1;Name=WP_110504282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024778.2;locus_tag=DDE35_RS00290;product=sulfite exporter TauE/SafE family protein;protein_id=WP_110504282.1;transl_table=11 NZ_CP029020.1 RefSeq gene 68688 69134 . - . ID=gene-DDE35_RS00295;Name=DDE35_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00295 NZ_CP029020.1 Protein Homology CDS 68688 69134 . - 0 ID=cds-WP_110480014.1;Parent=gene-DDE35_RS00295;Dbxref=Genbank:WP_110480014.1;Name=WP_110480014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038569.1;locus_tag=DDE35_RS00295;product=FixH family protein;protein_id=WP_110480014.1;transl_table=11 NZ_CP029020.1 RefSeq gene 69151 69921 . - . ID=gene-DDE35_RS00300;Name=DDE35_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00300 NZ_CP029020.1 Protein Homology CDS 69151 69921 . - 0 ID=cds-WP_110504283.1;Parent=gene-DDE35_RS00300;Dbxref=Genbank:WP_110504283.1;Name=WP_110504283.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799431.1;locus_tag=DDE35_RS00300;product=c-type cytochrome;protein_id=WP_110504283.1;transl_table=11 NZ_CP029020.1 RefSeq gene 69931 72168 . - . ID=gene-DDE35_RS00305;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=protein_coding;locus_tag=DDE35_RS00305 NZ_CP029020.1 Protein Homology CDS 69931 72168 . - 0 ID=cds-WP_110504284.1;Parent=gene-DDE35_RS00305;Dbxref=Genbank:WP_110504284.1;Name=WP_110504284.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoN;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799432.1;locus_tag=DDE35_RS00305;product=cytochrome-c oxidase%2C cbb3-type subunit I;protein_id=WP_110504284.1;transl_table=11 NZ_CP029020.1 RefSeq gene 72170 72286 . - . ID=gene-DDE35_RS00310;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=DDE35_RS00310 NZ_CP029020.1 Protein Homology CDS 72170 72286 . - 0 ID=cds-WP_239493546.1;Parent=gene-DDE35_RS00310;Dbxref=Genbank:WP_239493546.1;Name=WP_239493546.1;gbkey=CDS;gene=ccoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220954.1;locus_tag=DDE35_RS00310;product=cbb3-type cytochrome oxidase assembly protein CcoS;protein_id=WP_239493546.1;transl_table=11 NZ_CP029020.1 RefSeq gene 72292 74724 . - . ID=gene-DDE35_RS00315;Name=DDE35_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00315 NZ_CP029020.1 Protein Homology CDS 72292 74724 . - 0 ID=cds-WP_110504285.1;Parent=gene-DDE35_RS00315;Dbxref=Genbank:WP_110504285.1;Name=WP_110504285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799433.1;locus_tag=DDE35_RS00315;product=heavy metal translocating P-type ATPase metal-binding domain-containing protein;protein_id=WP_110504285.1;transl_table=11 NZ_CP029020.1 RefSeq gene 74756 76078 . - . ID=gene-DDE35_RS00320;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=DDE35_RS00320 NZ_CP029020.1 Protein Homology CDS 74756 76078 . - 0 ID=cds-WP_110504287.1;Parent=gene-DDE35_RS00320;Dbxref=Genbank:WP_110504287.1;Name=WP_110504287.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220952.1;locus_tag=DDE35_RS00320;product=ribosome biogenesis GTPase Der;protein_id=WP_110504287.1;transl_table=11 NZ_CP029020.1 RefSeq gene 76079 76936 . - . ID=gene-DDE35_RS00325;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=DDE35_RS00325 NZ_CP029020.1 Protein Homology CDS 76079 76936 . - 0 ID=cds-WP_110504288.1;Parent=gene-DDE35_RS00325;Dbxref=Genbank:WP_110504288.1;Name=WP_110504288.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799435.1;locus_tag=DDE35_RS00325;product=lipoyl synthase;protein_id=WP_110504288.1;transl_table=11 NZ_CP029020.1 RefSeq gene 76948 77100 . - . ID=gene-DDE35_RS00330;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=DDE35_RS00330 NZ_CP029020.1 Protein Homology CDS 76948 77100 . - 0 ID=cds-WP_015799436.1;Parent=gene-DDE35_RS00330;Dbxref=Genbank:WP_015799436.1;Name=WP_015799436.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013598444.1;locus_tag=DDE35_RS00330;product=50S ribosomal protein L34;protein_id=WP_015799436.1;transl_table=11 NZ_CP029020.1 RefSeq gene 77164 78042 . + . ID=gene-DDE35_RS00335;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=DDE35_RS00335 NZ_CP029020.1 Protein Homology CDS 77164 78042 . + 0 ID=cds-WP_110480026.1;Parent=gene-DDE35_RS00335;Dbxref=Genbank:WP_110480026.1;Name=WP_110480026.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799437.1;locus_tag=DDE35_RS00335;product=succinate--CoA ligase subunit alpha;protein_id=WP_110480026.1;transl_table=11 NZ_CP029020.1 RefSeq gene 78029 78628 . - . ID=gene-DDE35_RS00340;Name=DDE35_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00340 NZ_CP029020.1 Protein Homology CDS 78029 78628 . - 0 ID=cds-WP_239493547.1;Parent=gene-DDE35_RS00340;Dbxref=Genbank:WP_239493547.1;Name=WP_239493547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038575.1;locus_tag=DDE35_RS00340;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_239493547.1;transl_table=11 NZ_CP029020.1 RefSeq gene 78637 78721 . - . ID=gene-DDE35_RS00345;Name=DDE35_RS00345;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00345 NZ_CP029020.1 tRNAscan-SE tRNA 78637 78721 . - . ID=rna-DDE35_RS00345;Parent=gene-DDE35_RS00345;anticodon=(pos:complement(78685..78687));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00345;product=tRNA-Leu NZ_CP029020.1 tRNAscan-SE exon 78637 78721 . - . ID=exon-DDE35_RS00345-1;Parent=rna-DDE35_RS00345;anticodon=(pos:complement(78685..78687));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00345;product=tRNA-Leu NZ_CP029020.1 RefSeq gene 78728 78811 . - . ID=gene-DDE35_RS00350;Name=DDE35_RS00350;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00350 NZ_CP029020.1 tRNAscan-SE tRNA 78728 78811 . - . ID=rna-DDE35_RS00350;Parent=gene-DDE35_RS00350;anticodon=(pos:complement(78775..78777));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00350;product=tRNA-Leu NZ_CP029020.1 tRNAscan-SE exon 78728 78811 . - . ID=exon-DDE35_RS00350-1;Parent=rna-DDE35_RS00350;anticodon=(pos:complement(78775..78777));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00350;product=tRNA-Leu NZ_CP029020.1 RefSeq gene 78973 79947 . - . ID=gene-DDE35_RS00355;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=DDE35_RS00355 NZ_CP029020.1 Protein Homology CDS 78973 79947 . - 0 ID=cds-WP_110504290.1;Parent=gene-DDE35_RS00355;Dbxref=Genbank:WP_110504290.1;Name=WP_110504290.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799439.1;locus_tag=DDE35_RS00355;product=tryptophan--tRNA ligase;protein_id=WP_110504290.1;transl_table=11 NZ_CP029020.1 RefSeq gene 80005 81399 . + . ID=gene-DDE35_RS00360;Name=DDE35_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00360 NZ_CP029020.1 Protein Homology CDS 80005 81399 . + 0 ID=cds-WP_110504292.1;Parent=gene-DDE35_RS00360;Dbxref=Genbank:WP_110504292.1;Name=WP_110504292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016995.2;locus_tag=DDE35_RS00360;product=cytochrome c biogenesis protein ResB;protein_id=WP_110504292.1;transl_table=11 NZ_CP029020.1 RefSeq gene 81585 83147 . + . ID=gene-DDE35_RS00365;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=DDE35_RS00365 NZ_CP029020.1 Protein Homology CDS 81585 83147 . + 0 ID=cds-WP_110504294.1;Parent=gene-DDE35_RS00365;Dbxref=Genbank:WP_110504294.1;Name=WP_110504294.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: protein motif:HMM:NF013725.2;locus_tag=DDE35_RS00365;product=cytochrome c biogenesis protein CcsA;protein_id=WP_110504294.1;transl_table=11 NZ_CP029020.1 RefSeq gene 83310 85619 . - . ID=gene-DDE35_RS00370;Name=DDE35_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00370 NZ_CP029020.1 Protein Homology CDS 83310 85619 . - 0 ID=cds-WP_110504296.1;Parent=gene-DDE35_RS00370;Dbxref=Genbank:WP_110504296.1;Name=WP_110504296.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018899.2;locus_tag=DDE35_RS00370;product=hypothetical protein;protein_id=WP_110504296.1;transl_table=11 NZ_CP029020.1 RefSeq gene 85630 86235 . + . ID=gene-DDE35_RS00375;Name=DDE35_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00375 NZ_CP029020.1 Protein Homology CDS 85630 86235 . + 0 ID=cds-WP_204352333.1;Parent=gene-DDE35_RS00375;Dbxref=Genbank:WP_204352333.1;Name=WP_204352333.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013891.2;locus_tag=DDE35_RS00375;product=ribosome recycling factor;protein_id=WP_204352333.1;transl_table=11 NZ_CP029020.1 RefSeq gene 86241 87632 . + . ID=gene-DDE35_RS00380;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=DDE35_RS00380 NZ_CP029020.1 Protein Homology CDS 86241 87632 . + 0 ID=cds-WP_110480040.1;Parent=gene-DDE35_RS00380;Dbxref=Genbank:WP_110480040.1;Name=WP_110480040.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799442.1;locus_tag=DDE35_RS00380;product=asparagine--tRNA ligase;protein_id=WP_110480040.1;transl_table=11 NZ_CP029020.1 RefSeq gene 87643 87729 . + . ID=gene-DDE35_RS00385;Name=DDE35_RS00385;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00385 NZ_CP029020.1 tRNAscan-SE tRNA 87643 87729 . + . ID=rna-DDE35_RS00385;Parent=gene-DDE35_RS00385;anticodon=(pos:87677..87679);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00385;product=tRNA-Ser NZ_CP029020.1 tRNAscan-SE exon 87643 87729 . + . ID=exon-DDE35_RS00385-1;Parent=rna-DDE35_RS00385;anticodon=(pos:87677..87679);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00385;product=tRNA-Ser NZ_CP029020.1 RefSeq gene 87735 87808 . + . ID=gene-DDE35_RS00390;Name=DDE35_RS00390;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00390 NZ_CP029020.1 tRNAscan-SE tRNA 87735 87808 . + . ID=rna-DDE35_RS00390;Parent=gene-DDE35_RS00390;anticodon=(pos:87769..87771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00390;product=tRNA-Ile NZ_CP029020.1 tRNAscan-SE exon 87735 87808 . + . ID=exon-DDE35_RS00390-1;Parent=rna-DDE35_RS00390;anticodon=(pos:87769..87771);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00390;product=tRNA-Ile NZ_CP029020.1 RefSeq gene 87835 88179 . + . ID=gene-DDE35_RS00395;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=DDE35_RS00395 NZ_CP029020.1 Protein Homology CDS 87835 88179 . + 0 ID=cds-WP_110504300.1;Parent=gene-DDE35_RS00395;Dbxref=Genbank:WP_110504300.1;Name=WP_110504300.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF013025.2;locus_tag=DDE35_RS00395;product=50S ribosomal protein L21;protein_id=WP_110504300.1;transl_table=11 NZ_CP029020.1 RefSeq gene 88158 88412 . + . ID=gene-DDE35_RS00400;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=DDE35_RS00400 NZ_CP029020.1 Protein Homology CDS 88158 88412 . + 0 ID=cds-WP_015799444.1;Parent=gene-DDE35_RS00400;Dbxref=Genbank:WP_015799444.1;Name=WP_015799444.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743953.1;locus_tag=DDE35_RS00400;product=50S ribosomal protein L27;protein_id=WP_015799444.1;transl_table=11 NZ_CP029020.1 RefSeq gene 88423 88750 . + . ID=gene-DDE35_RS00405;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=DDE35_RS00405 NZ_CP029020.1 cmsearch tmRNA 88423 88750 . + . ID=rna-DDE35_RS00405;Parent=gene-DDE35_RS00405;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS00405;product=transfer-messenger RNA NZ_CP029020.1 cmsearch exon 88423 88750 . + . ID=exon-DDE35_RS00405-1;Parent=rna-DDE35_RS00405;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS00405;product=transfer-messenger RNA NZ_CP029020.1 RefSeq gene 88766 89125 . + . ID=gene-DDE35_RS00410;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=DDE35_RS00410 NZ_CP029020.1 Protein Homology CDS 88766 89125 . + 0 ID=cds-WP_110480044.1;Parent=gene-DDE35_RS00410;Dbxref=Genbank:WP_110480044.1;Name=WP_110480044.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799445.1;locus_tag=DDE35_RS00410;product=30S ribosomal protein S6;protein_id=WP_110480044.1;transl_table=11 NZ_CP029020.1 RefSeq gene 89433 89684 . + . ID=gene-DDE35_RS01485;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=DDE35_RS01485 NZ_CP029020.1 Protein Homology CDS 89433 89684 . + 0 ID=cds-WP_239493548.1;Parent=gene-DDE35_RS01485;Dbxref=Genbank:WP_239493548.1;Name=WP_239493548.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009414867.1;locus_tag=DDE35_RS01485;product=30S ribosomal protein S18;protein_id=WP_239493548.1;transl_table=11 NZ_CP029020.1 RefSeq gene 89686 90147 . + . ID=gene-DDE35_RS00420;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=DDE35_RS00420 NZ_CP029020.1 Protein Homology CDS 89686 90147 . + 0 ID=cds-WP_110504304.1;Parent=gene-DDE35_RS00420;Dbxref=Genbank:WP_110504304.1;Name=WP_110504304.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00158.1;locus_tag=DDE35_RS00420;product=50S ribosomal protein L9;protein_id=WP_110504304.1;transl_table=11 NZ_CP029020.1 RefSeq gene 90259 91257 . - . ID=gene-DDE35_RS00425;Name=DDE35_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00425 NZ_CP029020.1 GeneMarkS-2+ CDS 90259 91257 . - 0 ID=cds-WP_110504306.1;Parent=gene-DDE35_RS00425;Dbxref=Genbank:WP_110504306.1;Name=WP_110504306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE35_RS00425;product=hypothetical protein;protein_id=WP_110504306.1;transl_table=11 NZ_CP029020.1 RefSeq gene 91238 93034 . - . ID=gene-DDE35_RS00430;Name=DDE35_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00430 NZ_CP029020.1 Protein Homology CDS 91238 93034 . - 0 ID=cds-WP_110504308.1;Parent=gene-DDE35_RS00430;Dbxref=Genbank:WP_110504308.1;Name=WP_110504308.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024915.2;locus_tag=DDE35_RS00430;product=tetratricopeptide repeat protein;protein_id=WP_110504308.1;transl_table=11 NZ_CP029020.1 RefSeq gene 93039 93923 . - . ID=gene-DDE35_RS00435;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=DDE35_RS00435 NZ_CP029020.1 Protein Homology CDS 93039 93923 . - 0 ID=cds-WP_015799450.1;Parent=gene-DDE35_RS00435;Dbxref=Genbank:WP_015799450.1;Name=WP_015799450.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220941.1;locus_tag=DDE35_RS00435;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_015799450.1;transl_table=11 NZ_CP029020.1 RefSeq gene 94000 95607 . + . ID=gene-DDE35_RS00440;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=DDE35_RS00440 NZ_CP029020.1 Protein Homology CDS 94000 95607 . + 0 ID=cds-WP_110504310.1;Parent=gene-DDE35_RS00440;Dbxref=Genbank:WP_110504310.1;Name=WP_110504310.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783996.1;locus_tag=DDE35_RS00440;product=F0F1 ATP synthase subunit beta;protein_id=WP_110504310.1;transl_table=11 NZ_CP029020.1 RefSeq gene 95604 95900 . + . ID=gene-DDE35_RS00445;Name=DDE35_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00445 NZ_CP029020.1 Protein Homology CDS 95604 95900 . + 0 ID=cds-WP_110504311.1;Parent=gene-DDE35_RS00445;Dbxref=Genbank:WP_110504311.1;Name=WP_110504311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783995.1;locus_tag=DDE35_RS00445;product=ATP synthase F1 subunit epsilon;protein_id=WP_110504311.1;transl_table=11 NZ_CP029020.1 RefSeq gene 95976 96398 . - . ID=gene-DDE35_RS00450;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=DDE35_RS00450 NZ_CP029020.1 Protein Homology CDS 95976 96398 . - 0 ID=cds-WP_110504313.1;Parent=gene-DDE35_RS00450;Dbxref=Genbank:WP_110504313.1;Name=WP_110504313.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014246031.1;locus_tag=DDE35_RS00450;product=type II 3-dehydroquinate dehydratase;protein_id=WP_110504313.1;transl_table=11 NZ_CP029020.1 RefSeq gene 96410 96610 . - . ID=gene-DDE35_RS00455;Name=DDE35_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00455 NZ_CP029020.1 GeneMarkS-2+ CDS 96410 96610 . - 0 ID=cds-WP_204352334.1;Parent=gene-DDE35_RS00455;Dbxref=Genbank:WP_204352334.1;Name=WP_204352334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE35_RS00455;product=hypothetical protein;protein_id=WP_204352334.1;transl_table=11 NZ_CP029020.1 RefSeq gene 96627 97691 . - . ID=gene-DDE35_RS00460;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=DDE35_RS00460 NZ_CP029020.1 Protein Homology CDS 96627 97691 . - 0 ID=cds-WP_110480062.1;Parent=gene-DDE35_RS00460;Dbxref=Genbank:WP_110480062.1;Name=WP_110480062.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783993.1;locus_tag=DDE35_RS00460;product=peptide chain release factor 1;protein_id=WP_110480062.1;transl_table=11 NZ_CP029020.1 RefSeq pseudogene 97836 98960 . + . ID=gene-DDE35_RS00465;Name=rho;end_range=98960,.;gbkey=Gene;gene=rho;gene_biotype=pseudogene;locus_tag=DDE35_RS00465;partial=true;pseudo=true;start_range=.,97836 NZ_CP029020.1 Protein Homology CDS 97836 98960 . + 0 ID=cds-DDE35_RS00465;Parent=gene-DDE35_RS00465;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;end_range=98960,.;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821278.1;locus_tag=DDE35_RS00465;partial=true;product=transcription termination factor Rho;pseudo=true;start_range=.,97836;transl_table=11 NZ_CP029020.1 RefSeq gene 99029 100270 . - . ID=gene-DDE35_RS00470;Name=DDE35_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00470 NZ_CP029020.1 Protein Homology CDS 99029 100270 . - 0 ID=cds-WP_110504536.1;Parent=gene-DDE35_RS00470;Dbxref=Genbank:WP_110504536.1;Name=WP_110504536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370585.1;locus_tag=DDE35_RS00470;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_110504536.1;transl_table=11 NZ_CP029020.1 RefSeq pseudogene 100388 100702 . - . ID=gene-DDE35_RS01490;Name=DDE35_RS01490;end_range=100702,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DDE35_RS01490;partial=true;pseudo=true NZ_CP029020.1 Protein Homology CDS 100388 100702 . - 0 ID=cds-DDE35_RS01490;Parent=gene-DDE35_RS01490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=100702,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013742.2;locus_tag=DDE35_RS01490;partial=true;product=methyltransferase;pseudo=true;transl_table=11 NZ_CP029020.1 RefSeq gene 100904 102853 . - . ID=gene-DDE35_RS00480;Name=DDE35_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00480 NZ_CP029020.1 Protein Homology CDS 100904 102853 . - 0 ID=cds-WP_110504318.1;Parent=gene-DDE35_RS00480;Dbxref=Genbank:WP_110504318.1;Name=WP_110504318.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783989.1;locus_tag=DDE35_RS00480;product=S1 RNA-binding domain-containing protein;protein_id=WP_110504318.1;transl_table=11 NZ_CP029020.1 RefSeq gene 103013 104527 . - . ID=gene-DDE35_RS00485;Name=DDE35_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00485 NZ_CP029020.1 Protein Homology CDS 103013 104527 . - 0 ID=cds-WP_110504320.1;Parent=gene-DDE35_RS00485;Dbxref=Genbank:WP_110504320.1;Name=WP_110504320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743885.1;locus_tag=DDE35_RS00485;product=hypothetical protein;protein_id=WP_110504320.1;transl_table=11 NZ_CP029020.1 RefSeq gene 104657 105709 . - . ID=gene-DDE35_RS00490;Name=DDE35_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00490 NZ_CP029020.1 Protein Homology CDS 104657 105709 . - 0 ID=cds-WP_110504323.1;Parent=gene-DDE35_RS00490;Dbxref=Genbank:WP_110504323.1;Name=WP_110504323.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784065.1;locus_tag=DDE35_RS00490;product=branched-chain amino acid aminotransferase;protein_id=WP_110504323.1;transl_table=11 NZ_CP029020.1 RefSeq gene 105721 106539 . - . ID=gene-DDE35_RS00495;Name=DDE35_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00495 NZ_CP029020.1 Protein Homology CDS 105721 106539 . - 0 ID=cds-WP_110480076.1;Parent=gene-DDE35_RS00495;Dbxref=Genbank:WP_110480076.1;Name=WP_110480076.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014158668.1;locus_tag=DDE35_RS00495;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_110480076.1;transl_table=11 NZ_CP029020.1 RefSeq gene 106866 107282 . + . ID=gene-DDE35_RS00505;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=DDE35_RS00505 NZ_CP029020.1 Protein Homology CDS 106866 107282 . + 0 ID=cds-WP_110504327.1;Parent=gene-DDE35_RS00505;Dbxref=Genbank:WP_110504327.1;Name=WP_110504327.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784063.1;locus_tag=DDE35_RS00505;product=Holliday junction resolvase RuvX;protein_id=WP_110504327.1;transl_table=11 NZ_CP029020.1 RefSeq gene 107288 107830 . + . ID=gene-DDE35_RS00510;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=DDE35_RS00510 NZ_CP029020.1 Protein Homology CDS 107288 107830 . + 0 ID=cds-WP_110480082.1;Parent=gene-DDE35_RS00510;Dbxref=Genbank:WP_110480082.1;Name=WP_110480082.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784062.1;locus_tag=DDE35_RS00510;product=peptide deformylase;protein_id=WP_110480082.1;transl_table=11 NZ_CP029020.1 RefSeq gene 107802 108146 . - . ID=gene-DDE35_RS00515;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=DDE35_RS00515 NZ_CP029020.1 Protein Homology CDS 107802 108146 . - 0 ID=cds-WP_110480084.1;Parent=gene-DDE35_RS00515;Dbxref=Genbank:WP_110480084.1;Name=WP_110480084.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784061.1;locus_tag=DDE35_RS00515;product=50S ribosomal protein L20;protein_id=WP_110480084.1;transl_table=11 NZ_CP029020.1 RefSeq gene 108139 108333 . - . ID=gene-DDE35_RS00520;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=DDE35_RS00520 NZ_CP029020.1 Protein Homology CDS 108139 108333 . - 0 ID=cds-WP_110480086.1;Parent=gene-DDE35_RS00520;Dbxref=Genbank:WP_110480086.1;Name=WP_110480086.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784060.1;locus_tag=DDE35_RS00520;product=50S ribosomal protein L35;protein_id=WP_110480086.1;transl_table=11 NZ_CP029020.1 RefSeq gene 108339 108860 . - . ID=gene-DDE35_RS00525;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=DDE35_RS00525 NZ_CP029020.1 Protein Homology CDS 108339 108860 . - 0 ID=cds-WP_110480088.1;Parent=gene-DDE35_RS00525;Dbxref=Genbank:WP_110480088.1;Name=WP_110480088.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784059.1;locus_tag=DDE35_RS00525;product=translation initiation factor IF-3;protein_id=WP_110480088.1;transl_table=11 NZ_CP029020.1 RefSeq gene 108924 110828 . - . ID=gene-DDE35_RS00530;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=DDE35_RS00530 NZ_CP029020.1 Protein Homology CDS 108924 110828 . - 0 ID=cds-WP_110504329.1;Parent=gene-DDE35_RS00530;Dbxref=Genbank:WP_110504329.1;Name=WP_110504329.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014246159.1;locus_tag=DDE35_RS00530;product=molecular chaperone DnaK;protein_id=WP_110504329.1;transl_table=11 NZ_CP029020.1 RefSeq gene 111253 111708 . + . ID=gene-DDE35_RS00535;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=DDE35_RS00535 NZ_CP029020.1 Protein Homology CDS 111253 111708 . + 0 ID=cds-WP_012784057.1;Parent=gene-DDE35_RS00535;Dbxref=Genbank:WP_012784057.1;Name=WP_012784057.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012221000.1;locus_tag=DDE35_RS00535;product=50S ribosomal protein L13;protein_id=WP_012784057.1;transl_table=11 NZ_CP029020.1 RefSeq gene 111711 112100 . + . ID=gene-DDE35_RS00540;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=DDE35_RS00540 NZ_CP029020.1 Protein Homology CDS 111711 112100 . + 0 ID=cds-WP_110473418.1;Parent=gene-DDE35_RS00540;Dbxref=Genbank:WP_110473418.1;Name=WP_110473418.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315550.1;locus_tag=DDE35_RS00540;product=30S ribosomal protein S9;protein_id=WP_110473418.1;transl_table=11 NZ_CP029020.1 RefSeq gene 112105 112812 . + . ID=gene-DDE35_RS00545;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=DDE35_RS00545 NZ_CP029020.1 Protein Homology CDS 112105 112812 . + 0 ID=cds-WP_110504538.1;Parent=gene-DDE35_RS00545;Dbxref=Genbank:WP_110504538.1;Name=WP_110504538.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784055.1;locus_tag=DDE35_RS00545;product=30S ribosomal protein S2;protein_id=WP_110504538.1;transl_table=11 NZ_CP029020.1 RefSeq gene 112820 113671 . + . ID=gene-DDE35_RS00550;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=DDE35_RS00550 NZ_CP029020.1 Protein Homology CDS 112820 113671 . + 0 ID=cds-WP_110480346.1;Parent=gene-DDE35_RS00550;Dbxref=Genbank:WP_110480346.1;Name=WP_110480346.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315548.1;locus_tag=DDE35_RS00550;product=translation elongation factor Ts;protein_id=WP_110480346.1;transl_table=11 NZ_CP029020.1 RefSeq gene 113672 113758 . - . ID=gene-DDE35_RS00555;Name=DDE35_RS00555;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00555 NZ_CP029020.1 tRNAscan-SE tRNA 113672 113758 . - . ID=rna-DDE35_RS00555;Parent=gene-DDE35_RS00555;anticodon=(pos:complement(113722..113724));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00555;product=tRNA-Leu NZ_CP029020.1 tRNAscan-SE exon 113672 113758 . - . ID=exon-DDE35_RS00555-1;Parent=rna-DDE35_RS00555;anticodon=(pos:complement(113722..113724));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00555;product=tRNA-Leu NZ_CP029020.1 RefSeq gene 113798 113870 . - . ID=gene-DDE35_RS00560;Name=DDE35_RS00560;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00560 NZ_CP029020.1 tRNAscan-SE tRNA 113798 113870 . - . ID=rna-DDE35_RS00560;Parent=gene-DDE35_RS00560;anticodon=(pos:complement(113835..113837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00560;product=tRNA-Gly NZ_CP029020.1 tRNAscan-SE exon 113798 113870 . - . ID=exon-DDE35_RS00560-1;Parent=rna-DDE35_RS00560;anticodon=(pos:complement(113835..113837));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00560;product=tRNA-Gly NZ_CP029020.1 RefSeq gene 113874 116492 . - . ID=gene-DDE35_RS00565;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=DDE35_RS00565 NZ_CP029020.1 Protein Homology CDS 113874 116492 . - 0 ID=cds-WP_110504540.1;Parent=gene-DDE35_RS00565;Dbxref=Genbank:WP_110504540.1;Name=WP_110504540.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784053.1;locus_tag=DDE35_RS00565;product=DNA mismatch repair protein MutS;protein_id=WP_110504540.1;transl_table=11 NZ_CP029020.1 RefSeq gene 116494 117723 . - . ID=gene-DDE35_RS00570;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=DDE35_RS00570 NZ_CP029020.1 Protein Homology CDS 116494 117723 . - 0 ID=cds-WP_162616677.1;Parent=gene-DDE35_RS00570;Dbxref=Genbank:WP_162616677.1;Name=WP_162616677.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: protein motif:HMM:NF003745.1;locus_tag=DDE35_RS00570;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_162616677.1;transl_table=11 NZ_CP029020.1 RefSeq gene 117695 118348 . - . ID=gene-DDE35_RS00575;Name=DDE35_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00575 NZ_CP029020.1 Protein Homology CDS 117695 118348 . - 0 ID=cds-WP_110480092.1;Parent=gene-DDE35_RS00575;Dbxref=Genbank:WP_110480092.1;Name=WP_110480092.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821198.1;locus_tag=DDE35_RS00575;product=ATP-dependent Clp protease proteolytic subunit;protein_id=WP_110480092.1;transl_table=11 NZ_CP029020.1 RefSeq gene 118405 118566 . + . ID=gene-DDE35_RS00580;Name=DDE35_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00580 NZ_CP029020.1 Protein Homology CDS 118405 118566 . + 0 ID=cds-WP_110480094.1;Parent=gene-DDE35_RS00580;Dbxref=Genbank:WP_110480094.1;Name=WP_110480094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784052.1;locus_tag=DDE35_RS00580;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_110480094.1;transl_table=11 NZ_CP029020.1 RefSeq gene 118674 119717 . - . ID=gene-DDE35_RS00585;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=DDE35_RS00585 NZ_CP029020.1 Protein Homology CDS 118674 119717 . - 0 ID=cds-WP_110480096.1;Parent=gene-DDE35_RS00585;Dbxref=Genbank:WP_110480096.1;Name=WP_110480096.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784051.1;locus_tag=DDE35_RS00585;product=DNA polymerase III subunit gamma/tau;protein_id=WP_110480096.1;transl_table=11 NZ_CP029020.1 RefSeq gene 119729 120898 . - . ID=gene-DDE35_RS00590;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=DDE35_RS00590 NZ_CP029020.1 Protein Homology CDS 119729 120898 . - 0 ID=cds-WP_110504334.1;Parent=gene-DDE35_RS00590;Dbxref=Genbank:WP_110504334.1;Name=WP_110504334.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841106.1;locus_tag=DDE35_RS00590;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_110504334.1;transl_table=11 NZ_CP029020.1 RefSeq gene 120933 121042 . - . ID=gene-DDE35_RS00595;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=DDE35_RS00595 NZ_CP029020.1 cmsearch rRNA 120933 121042 . - . ID=rna-DDE35_RS00595;Parent=gene-DDE35_RS00595;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS00595;product=5S ribosomal RNA NZ_CP029020.1 cmsearch exon 120933 121042 . - . ID=exon-DDE35_RS00595-1;Parent=rna-DDE35_RS00595;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS00595;product=5S ribosomal RNA NZ_CP029020.1 RefSeq gene 121115 124016 . - . ID=gene-DDE35_RS00600;Name=DDE35_RS00600;gbkey=Gene;gene_biotype=rRNA;locus_tag=DDE35_RS00600 NZ_CP029020.1 cmsearch rRNA 121115 124016 . - . ID=rna-DDE35_RS00600;Parent=gene-DDE35_RS00600;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS00600;product=23S ribosomal RNA NZ_CP029020.1 cmsearch exon 121115 124016 . - . ID=exon-DDE35_RS00600-1;Parent=rna-DDE35_RS00600;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS00600;product=23S ribosomal RNA NZ_CP029020.1 RefSeq gene 124451 124524 . - . ID=gene-DDE35_RS00610;Name=DDE35_RS00610;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00610 NZ_CP029020.1 tRNAscan-SE tRNA 124451 124524 . - . ID=rna-DDE35_RS00610;Parent=gene-DDE35_RS00610;anticodon=(pos:complement(124488..124490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00610;product=tRNA-Ala NZ_CP029020.1 tRNAscan-SE exon 124451 124524 . - . ID=exon-DDE35_RS00610-1;Parent=rna-DDE35_RS00610;anticodon=(pos:complement(124488..124490));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00610;product=tRNA-Ala NZ_CP029020.1 RefSeq gene 124540 124613 . - . ID=gene-DDE35_RS00615;Name=DDE35_RS00615;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00615 NZ_CP029020.1 tRNAscan-SE tRNA 124540 124613 . - . ID=rna-DDE35_RS00615;Parent=gene-DDE35_RS00615;anticodon=(pos:complement(124577..124579));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00615;product=tRNA-Ile NZ_CP029020.1 tRNAscan-SE exon 124540 124613 . - . ID=exon-DDE35_RS00615-1;Parent=rna-DDE35_RS00615;anticodon=(pos:complement(124577..124579));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00615;product=tRNA-Ile NZ_CP029020.1 RefSeq gene 124716 126257 . - . ID=gene-DDE35_RS00620;Name=DDE35_RS00620;gbkey=Gene;gene_biotype=rRNA;locus_tag=DDE35_RS00620 NZ_CP029020.1 cmsearch rRNA 124716 126257 . - . ID=rna-DDE35_RS00620;Parent=gene-DDE35_RS00620;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS00620;product=16S ribosomal RNA NZ_CP029020.1 cmsearch exon 124716 126257 . - . ID=exon-DDE35_RS00620-1;Parent=rna-DDE35_RS00620;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS00620;product=16S ribosomal RNA NZ_CP029020.1 RefSeq gene 126466 127476 . + . ID=gene-DDE35_RS00625;Name=DDE35_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00625 NZ_CP029020.1 Protein Homology CDS 126466 127476 . + 0 ID=cds-WP_110504542.1;Parent=gene-DDE35_RS00625;Dbxref=Genbank:WP_110504542.1;Name=WP_110504542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784049.1;locus_tag=DDE35_RS00625;product=polyprenyl synthetase family protein;protein_id=WP_110504542.1;transl_table=11 NZ_CP029020.1 RefSeq gene 127481 127897 . + . ID=gene-DDE35_RS00630;Name=DDE35_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00630 NZ_CP029020.1 Protein Homology CDS 127481 127897 . + 0 ID=cds-WP_110480101.1;Parent=gene-DDE35_RS00630;Dbxref=Genbank:WP_110480101.1;Name=WP_110480101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784048.1;locus_tag=DDE35_RS00630;product=SufE family protein;protein_id=WP_110480101.1;transl_table=11 NZ_CP029020.1 RefSeq gene 127903 129048 . - . ID=gene-DDE35_RS00635;Name=DDE35_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00635 NZ_CP029020.1 Protein Homology CDS 127903 129048 . - 0 ID=cds-WP_110504335.1;Parent=gene-DDE35_RS00635;Dbxref=Genbank:WP_110504335.1;Name=WP_110504335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784047.1;locus_tag=DDE35_RS00635;product=hypothetical protein;protein_id=WP_110504335.1;transl_table=11 NZ_CP029020.1 RefSeq gene 129050 129637 . - . ID=gene-DDE35_RS00640;Name=DDE35_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00640 NZ_CP029020.1 Protein Homology CDS 129050 129637 . - 0 ID=cds-WP_110480105.1;Parent=gene-DDE35_RS00640;Dbxref=Genbank:WP_110480105.1;Name=WP_110480105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784046.1;locus_tag=DDE35_RS00640;product=cytochrome c;protein_id=WP_110480105.1;transl_table=11 NZ_CP029020.1 RefSeq gene 129645 130166 . - . ID=gene-DDE35_RS00645;Name=DDE35_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00645 NZ_CP029020.1 Protein Homology CDS 129645 130166 . - 0 ID=cds-WP_110480107.1;Parent=gene-DDE35_RS00645;Dbxref=Genbank:WP_110480107.1;Name=WP_110480107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784045.1;locus_tag=DDE35_RS00645;product=DUF3341 domain-containing protein;protein_id=WP_110480107.1;transl_table=11 NZ_CP029020.1 RefSeq gene 130167 131495 . - . ID=gene-DDE35_RS00650;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=DDE35_RS00650 NZ_CP029020.1 Protein Homology CDS 130167 131495 . - 0 ID=cds-WP_110504337.1;Parent=gene-DDE35_RS00650;Dbxref=Genbank:WP_110504337.1;Name=WP_110504337.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784044.1;locus_tag=DDE35_RS00650;product=polysulfide reductase NrfD;protein_id=WP_110504337.1;transl_table=11 NZ_CP029020.1 RefSeq gene 131508 134471 . - . ID=gene-DDE35_RS00655;Name=DDE35_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00655 NZ_CP029020.1 Protein Homology CDS 131508 134471 . - 0 ID=cds-WP_110504339.1;Parent=gene-DDE35_RS00655;Dbxref=Genbank:WP_110504339.1;Name=WP_110504339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784043.1;locus_tag=DDE35_RS00655;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_110504339.1;transl_table=11 NZ_CP029020.1 RefSeq gene 134533 135861 . - . ID=gene-DDE35_RS00660;Name=DDE35_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00660 NZ_CP029020.1 Protein Homology CDS 134533 135861 . - 0 ID=cds-WP_110504341.1;Parent=gene-DDE35_RS00660;Dbxref=Genbank:WP_110504341.1;Name=WP_110504341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784042.1;locus_tag=DDE35_RS00660;product=c-type cytochrome;protein_id=WP_110504341.1;transl_table=11 NZ_CP029020.1 RefSeq gene 136125 136198 . + . ID=gene-DDE35_RS00665;Name=DDE35_RS00665;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00665 NZ_CP029020.1 tRNAscan-SE tRNA 136125 136198 . + . ID=rna-DDE35_RS00665;Parent=gene-DDE35_RS00665;anticodon=(pos:136159..136161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00665;product=tRNA-Thr NZ_CP029020.1 tRNAscan-SE exon 136125 136198 . + . ID=exon-DDE35_RS00665-1;Parent=rna-DDE35_RS00665;anticodon=(pos:136159..136161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00665;product=tRNA-Thr NZ_CP029020.1 RefSeq gene 136218 136300 . + . ID=gene-DDE35_RS00670;Name=DDE35_RS00670;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00670 NZ_CP029020.1 tRNAscan-SE tRNA 136218 136300 . + . ID=rna-DDE35_RS00670;Parent=gene-DDE35_RS00670;anticodon=(pos:136252..136254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00670;product=tRNA-Tyr NZ_CP029020.1 tRNAscan-SE exon 136218 136300 . + . ID=exon-DDE35_RS00670-1;Parent=rna-DDE35_RS00670;anticodon=(pos:136252..136254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00670;product=tRNA-Tyr NZ_CP029020.1 RefSeq gene 136323 136395 . + . ID=gene-DDE35_RS00675;Name=DDE35_RS00675;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00675 NZ_CP029020.1 tRNAscan-SE tRNA 136323 136395 . + . ID=rna-DDE35_RS00675;Parent=gene-DDE35_RS00675;anticodon=(pos:136356..136358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00675;product=tRNA-Gly NZ_CP029020.1 tRNAscan-SE exon 136323 136395 . + . ID=exon-DDE35_RS00675-1;Parent=rna-DDE35_RS00675;anticodon=(pos:136356..136358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00675;product=tRNA-Gly NZ_CP029020.1 RefSeq gene 136411 136483 . + . ID=gene-DDE35_RS00680;Name=DDE35_RS00680;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00680 NZ_CP029020.1 tRNAscan-SE tRNA 136411 136483 . + . ID=rna-DDE35_RS00680;Parent=gene-DDE35_RS00680;anticodon=(pos:136444..136446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00680;product=tRNA-Thr NZ_CP029020.1 tRNAscan-SE exon 136411 136483 . + . ID=exon-DDE35_RS00680-1;Parent=rna-DDE35_RS00680;anticodon=(pos:136444..136446);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00680;product=tRNA-Thr NZ_CP029020.1 RefSeq gene 136501 137748 . + . ID=gene-DDE35_RS00685;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=DDE35_RS00685 NZ_CP029020.1 Protein Homology CDS 136501 137748 . + 0 ID=cds-WP_110504343.1;Parent=gene-DDE35_RS00685;Dbxref=Genbank:WP_110504343.1;Name=WP_110504343.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014201829.1;locus_tag=DDE35_RS00685;product=elongation factor Tu;protein_id=WP_110504343.1;transl_table=11 NZ_CP029020.1 RefSeq gene 137768 137841 . + . ID=gene-DDE35_RS00690;Name=DDE35_RS00690;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00690 NZ_CP029020.1 tRNAscan-SE tRNA 137768 137841 . + . ID=rna-DDE35_RS00690;Parent=gene-DDE35_RS00690;anticodon=(pos:137802..137804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00690;product=tRNA-Trp NZ_CP029020.1 tRNAscan-SE exon 137768 137841 . + . ID=exon-DDE35_RS00690-1;Parent=rna-DDE35_RS00690;anticodon=(pos:137802..137804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00690;product=tRNA-Trp NZ_CP029020.1 RefSeq gene 137861 138091 . + . ID=gene-DDE35_RS00695;Name=DDE35_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00695 NZ_CP029020.1 GeneMarkS-2+ CDS 137861 138091 . + 0 ID=cds-WP_110504345.1;Parent=gene-DDE35_RS00695;Dbxref=Genbank:WP_110504345.1;Name=WP_110504345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE35_RS00695;product=hypothetical protein;protein_id=WP_110504345.1;transl_table=11 NZ_CP029020.1 RefSeq gene 138122 138544 . + . ID=gene-DDE35_RS00700;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=DDE35_RS00700 NZ_CP029020.1 Protein Homology CDS 138122 138544 . + 0 ID=cds-WP_110473318.1;Parent=gene-DDE35_RS00700;Dbxref=Genbank:WP_110473318.1;Name=WP_110473318.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315532.1;locus_tag=DDE35_RS00700;product=50S ribosomal protein L11;protein_id=WP_110473318.1;transl_table=11 NZ_CP029020.1 RefSeq gene 138575 139255 . + . ID=gene-DDE35_RS00705;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=DDE35_RS00705 NZ_CP029020.1 Protein Homology CDS 138575 139255 . + 0 ID=cds-WP_110480119.1;Parent=gene-DDE35_RS00705;Dbxref=Genbank:WP_110480119.1;Name=WP_110480119.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784039.1;locus_tag=DDE35_RS00705;product=50S ribosomal protein L1;protein_id=WP_110480119.1;transl_table=11 NZ_CP029020.1 RefSeq gene 139267 139806 . + . ID=gene-DDE35_RS00710;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=DDE35_RS00710 NZ_CP029020.1 Protein Homology CDS 139267 139806 . + 0 ID=cds-WP_110480120.1;Parent=gene-DDE35_RS00710;Dbxref=Genbank:WP_110480120.1;Name=WP_110480120.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784038.1;locus_tag=DDE35_RS00710;product=50S ribosomal protein L10;protein_id=WP_110480120.1;transl_table=11 NZ_CP029020.1 RefSeq gene 139838 140206 . + . ID=gene-DDE35_RS00715;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=DDE35_RS00715 NZ_CP029020.1 Protein Homology CDS 139838 140206 . + 0 ID=cds-WP_204352335.1;Parent=gene-DDE35_RS00715;Dbxref=Genbank:WP_204352335.1;Name=WP_204352335.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315529.1;locus_tag=DDE35_RS00715;product=50S ribosomal protein L7/L12;protein_id=WP_204352335.1;transl_table=11 NZ_CP029020.1 RefSeq gene 140218 144111 . + . ID=gene-DDE35_RS00720;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=DDE35_RS00720 NZ_CP029020.1 Protein Homology CDS 140218 144111 . + 0 ID=cds-WP_239493538.1;Parent=gene-DDE35_RS00720;Dbxref=Genbank:WP_239493538.1;Name=WP_239493538.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784036.1;locus_tag=DDE35_RS00720;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_239493538.1;transl_table=11 NZ_CP029020.1 RefSeq gene 144162 148484 . + . ID=gene-DDE35_RS00725;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=DDE35_RS00725 NZ_CP029020.1 Protein Homology CDS 144162 148484 . + 0 ID=cds-WP_110504546.1;Parent=gene-DDE35_RS00725;Dbxref=Genbank:WP_110504546.1;Name=WP_110504546.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784035.1;locus_tag=DDE35_RS00725;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_110504546.1;transl_table=11 NZ_CP029020.1 RefSeq gene 148481 149233 . - . ID=gene-DDE35_RS00730;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=DDE35_RS00730 NZ_CP029020.1 Protein Homology CDS 148481 149233 . - 0 ID=cds-WP_110504349.1;Parent=gene-DDE35_RS00730;Dbxref=Genbank:WP_110504349.1;Name=WP_110504349.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038507.1;locus_tag=DDE35_RS00730;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_110504349.1;transl_table=11 NZ_CP029020.1 RefSeq gene 149340 150266 . + . ID=gene-DDE35_RS00735;Name=DDE35_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00735 NZ_CP029020.1 Protein Homology CDS 149340 150266 . + 0 ID=cds-WP_262494487.1;Parent=gene-DDE35_RS00735;Dbxref=Genbank:WP_262494487.1;Name=WP_262494487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038506.1;locus_tag=DDE35_RS00735;product=RluA family pseudouridine synthase;protein_id=WP_262494487.1;transl_table=11 NZ_CP029020.1 RefSeq gene 150276 150349 . + . ID=gene-DDE35_RS00740;Name=DDE35_RS00740;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00740 NZ_CP029020.1 tRNAscan-SE tRNA 150276 150349 . + . ID=rna-DDE35_RS00740;Parent=gene-DDE35_RS00740;anticodon=(pos:150310..150312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00740;product=tRNA-His NZ_CP029020.1 tRNAscan-SE exon 150276 150349 . + . ID=exon-DDE35_RS00740-1;Parent=rna-DDE35_RS00740;anticodon=(pos:150310..150312);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00740;product=tRNA-His NZ_CP029020.1 RefSeq gene 150569 150751 . - . ID=gene-DDE35_RS00750;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=DDE35_RS00750 NZ_CP029020.1 Protein Homology CDS 150569 150751 . - 0 ID=cds-WP_012784032.1;Parent=gene-DDE35_RS00750;Dbxref=Genbank:WP_012784032.1;Name=WP_012784032.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011963553.1;locus_tag=DDE35_RS00750;product=50S ribosomal protein L33;protein_id=WP_012784032.1;transl_table=11 NZ_CP029020.1 RefSeq gene 150721 150960 . - . ID=gene-DDE35_RS00755;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=DDE35_RS00755 NZ_CP029020.1 Protein Homology CDS 150721 150960 . - 0 ID=cds-WP_110480128.1;Parent=gene-DDE35_RS00755;Dbxref=Genbank:WP_110480128.1;Name=WP_110480128.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013598566.1;locus_tag=DDE35_RS00755;product=50S ribosomal protein L28;protein_id=WP_110480128.1;transl_table=11 NZ_CP029020.1 RefSeq gene 150939 152213 . - . ID=gene-DDE35_RS00760;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=DDE35_RS00760 NZ_CP029020.1 Protein Homology CDS 150939 152213 . - 0 ID=cds-WP_110504353.1;Parent=gene-DDE35_RS00760;Dbxref=Genbank:WP_110504353.1;Name=WP_110504353.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784030.1;locus_tag=DDE35_RS00760;product=serine--tRNA ligase;protein_id=WP_110504353.1;transl_table=11 NZ_CP029020.1 RefSeq gene 152237 152308 . - . ID=gene-DDE35_RS00765;Name=DDE35_RS00765;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00765 NZ_CP029020.1 tRNAscan-SE tRNA 152237 152308 . - . ID=rna-DDE35_RS00765;Parent=gene-DDE35_RS00765;anticodon=(pos:complement(152273..152275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00765;product=tRNA-Phe NZ_CP029020.1 tRNAscan-SE exon 152237 152308 . - . ID=exon-DDE35_RS00765-1;Parent=rna-DDE35_RS00765;anticodon=(pos:complement(152273..152275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00765;product=tRNA-Phe NZ_CP029020.1 RefSeq gene 152320 153288 . - . ID=gene-DDE35_RS00770;Name=DDE35_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00770 NZ_CP029020.1 Protein Homology CDS 152320 153288 . - 0 ID=cds-WP_110504355.1;Parent=gene-DDE35_RS00770;Dbxref=Genbank:WP_110504355.1;Name=WP_110504355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370771.1;locus_tag=DDE35_RS00770;product=transketolase family protein;protein_id=WP_110504355.1;transl_table=11 NZ_CP029020.1 RefSeq gene 153295 154146 . - . ID=gene-DDE35_RS00775;Name=DDE35_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00775 NZ_CP029020.1 Protein Homology CDS 153295 154146 . - 0 ID=cds-WP_012784028.1;Parent=gene-DDE35_RS00775;Dbxref=Genbank:WP_012784028.1;Name=WP_012784028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013619981.1;locus_tag=DDE35_RS00775;product=transketolase;protein_id=WP_012784028.1;transl_table=11 NZ_CP029020.1 RefSeq gene 154237 156996 . - . ID=gene-DDE35_RS00780;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=DDE35_RS00780 NZ_CP029020.1 Protein Homology CDS 154237 156996 . - 0 ID=cds-WP_110504548.1;Parent=gene-DDE35_RS00780;Dbxref=Genbank:WP_110504548.1;Name=WP_110504548.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784027.1;locus_tag=DDE35_RS00780;product=leucine--tRNA ligase;protein_id=WP_110504548.1;transl_table=11 NZ_CP029020.1 RefSeq gene 157026 158306 . - . ID=gene-DDE35_RS00785;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=DDE35_RS00785 NZ_CP029020.1 Protein Homology CDS 157026 158306 . - 0 ID=cds-WP_110504357.1;Parent=gene-DDE35_RS00785;Dbxref=Genbank:WP_110504357.1;Name=WP_110504357.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784026.1;locus_tag=DDE35_RS00785;product=tyrosine--tRNA ligase;protein_id=WP_110504357.1;transl_table=11 NZ_CP029020.1 RefSeq gene 158335 158724 . + . ID=gene-DDE35_RS00790;Name=DDE35_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00790 NZ_CP029020.1 GeneMarkS-2+ CDS 158335 158724 . + 0 ID=cds-WP_110480140.1;Parent=gene-DDE35_RS00790;Dbxref=Genbank:WP_110480140.1;Name=WP_110480140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE35_RS00790;product=hypothetical protein;protein_id=WP_110480140.1;transl_table=11 NZ_CP029020.1 RefSeq gene 158751 159908 . + . ID=gene-DDE35_RS00795;Name=DDE35_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00795 NZ_CP029020.1 Protein Homology CDS 158751 159908 . + 0 ID=cds-WP_110504360.1;Parent=gene-DDE35_RS00795;Dbxref=Genbank:WP_110504360.1;Name=WP_110504360.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784024.1;locus_tag=DDE35_RS00795;product=2-isopropylmalate synthase;protein_id=WP_110504360.1;transl_table=11 NZ_CP029020.1 RefSeq gene 159910 161319 . + . ID=gene-DDE35_RS00800;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=DDE35_RS00800 NZ_CP029020.1 Protein Homology CDS 159910 161319 . + 0 ID=cds-WP_110504362.1;Parent=gene-DDE35_RS00800;Dbxref=Genbank:WP_110504362.1;Name=WP_110504362.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784023.1;locus_tag=DDE35_RS00800;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_110504362.1;transl_table=11 NZ_CP029020.1 RefSeq gene 161326 161904 . + . ID=gene-DDE35_RS00805;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=DDE35_RS00805 NZ_CP029020.1 Protein Homology CDS 161326 161904 . + 0 ID=cds-WP_110504363.1;Parent=gene-DDE35_RS00805;Dbxref=Genbank:WP_110504363.1;Name=WP_110504363.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784022.1;locus_tag=DDE35_RS00805;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_110504363.1;transl_table=11 NZ_CP029020.1 RefSeq gene 161908 162966 . + . ID=gene-DDE35_RS00810;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=DDE35_RS00810 NZ_CP029020.1 Protein Homology CDS 161908 162966 . + 0 ID=cds-WP_110504365.1;Parent=gene-DDE35_RS00810;Dbxref=Genbank:WP_110504365.1;Name=WP_110504365.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784021.1;locus_tag=DDE35_RS00810;product=3-isopropylmalate dehydrogenase;protein_id=WP_110504365.1;transl_table=11 NZ_CP029020.1 RefSeq gene 163075 163740 . + . ID=gene-DDE35_RS00815;Name=DDE35_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00815 NZ_CP029020.1 Protein Homology CDS 163075 163740 . + 0 ID=cds-WP_110504367.1;Parent=gene-DDE35_RS00815;Dbxref=Genbank:WP_110504367.1;Name=WP_110504367.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012797.2;locus_tag=DDE35_RS00815;product=RNA methyltransferase;protein_id=WP_110504367.1;transl_table=11 NZ_CP029020.1 RefSeq gene 164062 164670 . + . ID=gene-DDE35_RS00820;Name=DDE35_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00820 NZ_CP029020.1 Protein Homology CDS 164062 164670 . + 0 ID=cds-WP_204352328.1;Parent=gene-DDE35_RS00820;Dbxref=Genbank:WP_204352328.1;Name=WP_204352328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784020.1;locus_tag=DDE35_RS00820;product=MarC family protein;protein_id=WP_204352328.1;transl_table=11 NZ_CP029020.1 RefSeq gene 164897 166129 . + . ID=gene-DDE35_RS00825;Name=DDE35_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00825 NZ_CP029020.1 Protein Homology CDS 164897 166129 . + 0 ID=cds-WP_110504368.1;Parent=gene-DDE35_RS00825;Dbxref=Genbank:WP_110504368.1;Name=WP_110504368.1;Ontology_term=GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784019.1;locus_tag=DDE35_RS00825;product=aspartate kinase;protein_id=WP_110504368.1;transl_table=11 NZ_CP029020.1 RefSeq gene 166558 167577 . + . ID=gene-DDE35_RS00830;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=DDE35_RS00830 NZ_CP029020.1 Protein Homology CDS 166558 167577 . + 0 ID=cds-WP_110504370.1;Parent=gene-DDE35_RS00830;Dbxref=Genbank:WP_110504370.1;Name=WP_110504370.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpB;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784018.1;locus_tag=DDE35_RS00830;product=F0F1 ATP synthase subunit A;protein_id=WP_110504370.1;transl_table=11 NZ_CP029020.1 RefSeq gene 167658 167885 . + . ID=gene-DDE35_RS00835;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=DDE35_RS00835 NZ_CP029020.1 Protein Homology CDS 167658 167885 . + 0 ID=cds-WP_110467202.1;Parent=gene-DDE35_RS00835;Dbxref=Genbank:WP_110467202.1;Name=WP_110467202.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpE;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821237.1;locus_tag=DDE35_RS00835;product=ATP synthase F0 subunit C;protein_id=WP_110467202.1;transl_table=11 NZ_CP029020.1 RefSeq gene 167902 168384 . + . ID=gene-DDE35_RS00840;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=DDE35_RS00840 NZ_CP029020.1 Protein Homology CDS 167902 168384 . + 0 ID=cds-WP_110504373.1;Parent=gene-DDE35_RS00840;Dbxref=Genbank:WP_110504373.1;Name=WP_110504373.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784016.1;locus_tag=DDE35_RS00840;product=F0F1 ATP synthase subunit B;protein_id=WP_110504373.1;transl_table=11 NZ_CP029020.1 RefSeq gene 168387 168926 . + . ID=gene-DDE35_RS00845;Name=DDE35_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00845 NZ_CP029020.1 Protein Homology CDS 168387 168926 . + 0 ID=cds-WP_110480160.1;Parent=gene-DDE35_RS00845;Dbxref=Genbank:WP_110480160.1;Name=WP_110480160.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: protein motif:HMM:NF012439.2;locus_tag=DDE35_RS00845;product=F0F1 ATP synthase subunit delta;protein_id=WP_110480160.1;transl_table=11 NZ_CP029020.1 RefSeq gene 168933 170525 . + . ID=gene-DDE35_RS00850;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=DDE35_RS00850 NZ_CP029020.1 Protein Homology CDS 168933 170525 . + 0 ID=cds-WP_110504375.1;Parent=gene-DDE35_RS00850;Dbxref=Genbank:WP_110504375.1;Name=WP_110504375.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784014.1;locus_tag=DDE35_RS00850;product=F0F1 ATP synthase subunit alpha;protein_id=WP_110504375.1;transl_table=11 NZ_CP029020.1 RefSeq gene 170518 171354 . + . ID=gene-DDE35_RS00855;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=DDE35_RS00855 NZ_CP029020.1 Protein Homology CDS 170518 171354 . + 0 ID=cds-WP_110504377.1;Parent=gene-DDE35_RS00855;Dbxref=Genbank:WP_110504377.1;Name=WP_110504377.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpG;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784013.1;locus_tag=DDE35_RS00855;product=ATP synthase F1 subunit gamma;protein_id=WP_110504377.1;transl_table=11 NZ_CP029020.1 RefSeq gene 171361 172812 . + . ID=gene-DDE35_RS00860;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=DDE35_RS00860 NZ_CP029020.1 Protein Homology CDS 171361 172812 . + 0 ID=cds-WP_110480165.1;Parent=gene-DDE35_RS00860;Dbxref=Genbank:WP_110480165.1;Name=WP_110480165.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784012.1;locus_tag=DDE35_RS00860;product=glutamate--tRNA ligase;protein_id=WP_110480165.1;transl_table=11 NZ_CP029020.1 RefSeq gene 172774 173613 . - . ID=gene-DDE35_RS00865;Name=DDE35_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00865 NZ_CP029020.1 Protein Homology CDS 172774 173613 . - 0 ID=cds-WP_110504379.1;Parent=gene-DDE35_RS00865;Dbxref=Genbank:WP_110504379.1;Name=WP_110504379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315499.1;locus_tag=DDE35_RS00865;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_110504379.1;transl_table=11 NZ_CP029020.1 RefSeq gene 173621 175285 . - . ID=gene-DDE35_RS00870;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=DDE35_RS00870 NZ_CP029020.1 Protein Homology CDS 173621 175285 . - 0 ID=cds-WP_110504381.1;Parent=gene-DDE35_RS00870;Dbxref=Genbank:WP_110504381.1;Name=WP_110504381.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784010.1;locus_tag=DDE35_RS00870;product=methionine--tRNA ligase;protein_id=WP_110504381.1;transl_table=11 NZ_CP029020.1 RefSeq gene 175286 175891 . - . ID=gene-DDE35_RS00875;Name=DDE35_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00875 NZ_CP029020.1 Protein Homology CDS 175286 175891 . - 0 ID=cds-WP_110504383.1;Parent=gene-DDE35_RS00875;Dbxref=Genbank:WP_110504383.1;Name=WP_110504383.1;Ontology_term=GO:0006412,GO:0006950,GO:0003735,GO:0008097,GO:0000315,GO:0022625;gbkey=CDS;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784009.1;locus_tag=DDE35_RS00875;product=50S ribosomal protein L25;protein_id=WP_110504383.1;transl_table=11 NZ_CP029020.1 RefSeq gene 175904 176809 . - . ID=gene-DDE35_RS00880;Name=DDE35_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00880 NZ_CP029020.1 Protein Homology CDS 175904 176809 . - 0 ID=cds-WP_110504385.1;Parent=gene-DDE35_RS00880;Dbxref=Genbank:WP_110504385.1;Name=WP_110504385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784008.1;locus_tag=DDE35_RS00880;product=ribose-phosphate pyrophosphokinase;protein_id=WP_110504385.1;transl_table=11 NZ_CP029020.1 RefSeq gene 176855 176925 . + . ID=gene-DDE35_RS00885;Name=DDE35_RS00885;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00885 NZ_CP029020.1 tRNAscan-SE tRNA 176855 176925 . + . ID=rna-DDE35_RS00885;Parent=gene-DDE35_RS00885;anticodon=(pos:176887..176889);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00885;product=tRNA-Cys NZ_CP029020.1 tRNAscan-SE exon 176855 176925 . + . ID=exon-DDE35_RS00885-1;Parent=rna-DDE35_RS00885;anticodon=(pos:176887..176889);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00885;product=tRNA-Cys NZ_CP029020.1 RefSeq gene 176929 177594 . - . ID=gene-DDE35_RS00890;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=DDE35_RS00890 NZ_CP029020.1 Protein Homology CDS 176929 177594 . - 0 ID=cds-WP_110480175.1;Parent=gene-DDE35_RS00890;Dbxref=Genbank:WP_110480175.1;Name=WP_110480175.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784007.1;locus_tag=DDE35_RS00890;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_110480175.1;transl_table=11 NZ_CP029020.1 RefSeq gene 177611 178051 . + . ID=gene-DDE35_RS00895;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=DDE35_RS00895 NZ_CP029020.1 Protein Homology CDS 177611 178051 . + 0 ID=cds-WP_110504387.1;Parent=gene-DDE35_RS00895;Dbxref=Genbank:WP_110504387.1;Name=WP_110504387.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038486.1;locus_tag=DDE35_RS00895;product=rRNA maturation RNase YbeY;protein_id=WP_110504387.1;transl_table=11 NZ_CP029020.1 RefSeq gene 178044 179912 . + . ID=gene-DDE35_RS00900;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=DDE35_RS00900 NZ_CP029020.1 Protein Homology CDS 178044 179912 . + 0 ID=cds-WP_110504389.1;Parent=gene-DDE35_RS00900;Dbxref=Genbank:WP_110504389.1;Name=WP_110504389.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784005.1;locus_tag=DDE35_RS00900;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_110504389.1;transl_table=11 NZ_CP029020.1 RefSeq gene 179976 181607 . + . ID=gene-DDE35_RS00905;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=DDE35_RS00905 NZ_CP029020.1 Protein Homology CDS 179976 181607 . + 0 ID=cds-WP_110504391.1;Parent=gene-DDE35_RS00905;Dbxref=Genbank:WP_110504391.1;Name=WP_110504391.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784004.1;locus_tag=DDE35_RS00905;product=glutamine--tRNA ligase;protein_id=WP_110504391.1;transl_table=11 NZ_CP029020.1 RefSeq gene 181613 181837 . - . ID=gene-DDE35_RS00910;Name=DDE35_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00910 NZ_CP029020.1 Protein Homology CDS 181613 181837 . - 0 ID=cds-WP_110473557.1;Parent=gene-DDE35_RS00910;Dbxref=Genbank:WP_110473557.1;Name=WP_110473557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784003.1;locus_tag=DDE35_RS00910;product=ferredoxin;protein_id=WP_110473557.1;transl_table=11 NZ_CP029020.1 RefSeq gene 181837 183081 . - . ID=gene-DDE35_RS00915;Name=DDE35_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00915 NZ_CP029020.1 Protein Homology CDS 181837 183081 . - 0 ID=cds-WP_110480186.1;Parent=gene-DDE35_RS00915;Dbxref=Genbank:WP_110480186.1;Name=WP_110480186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784002.1;locus_tag=DDE35_RS00915;product=U32 family peptidase;protein_id=WP_110480186.1;transl_table=11 NZ_CP029020.1 RefSeq gene 183102 184181 . + . ID=gene-DDE35_RS00920;Name=DDE35_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00920 NZ_CP029020.1 Protein Homology CDS 183102 184181 . + 0 ID=cds-WP_110504393.1;Parent=gene-DDE35_RS00920;Dbxref=Genbank:WP_110504393.1;Name=WP_110504393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784001.1;locus_tag=DDE35_RS00920;product=DNA polymerase III subunit delta';protein_id=WP_110504393.1;transl_table=11 NZ_CP029020.1 RefSeq gene 184188 185999 . + . ID=gene-DDE35_RS00925;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=DDE35_RS00925 NZ_CP029020.1 Protein Homology CDS 184188 185999 . + 0 ID=cds-WP_110504395.1;Parent=gene-DDE35_RS00925;Dbxref=Genbank:WP_110504395.1;Name=WP_110504395.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315488.1;locus_tag=DDE35_RS00925;product=translation elongation factor 4;protein_id=WP_110504395.1;transl_table=11 NZ_CP029020.1 RefSeq gene 186163 186237 . + . ID=gene-DDE35_RS00930;Name=DDE35_RS00930;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00930 NZ_CP029020.1 tRNAscan-SE tRNA 186163 186237 . + . ID=rna-DDE35_RS00930;Parent=gene-DDE35_RS00930;anticodon=(pos:186198..186200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00930;product=tRNA-Asn NZ_CP029020.1 tRNAscan-SE exon 186163 186237 . + . ID=exon-DDE35_RS00930-1;Parent=rna-DDE35_RS00930;anticodon=(pos:186198..186200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00930;product=tRNA-Asn NZ_CP029020.1 RefSeq gene 186199 186798 . - . ID=gene-DDE35_RS00935;Name=DDE35_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00935 NZ_CP029020.1 Protein Homology CDS 186199 186798 . - 0 ID=cds-WP_110504550.1;Parent=gene-DDE35_RS00935;Dbxref=Genbank:WP_110504550.1;Name=WP_110504550.1;Ontology_term=GO:0006508,GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013421.2;locus_tag=DDE35_RS00935;product=signal peptidase II;protein_id=WP_110504550.1;transl_table=11 NZ_CP029020.1 RefSeq gene 186808 190182 . - . ID=gene-DDE35_RS00940;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=DDE35_RS00940 NZ_CP029020.1 Protein Homology CDS 186808 190182 . - 0 ID=cds-WP_110504397.1;Parent=gene-DDE35_RS00940;Dbxref=Genbank:WP_110504397.1;Name=WP_110504397.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821605.1;locus_tag=DDE35_RS00940;product=isoleucine--tRNA ligase;protein_id=WP_110504397.1;transl_table=11 NZ_CP029020.1 RefSeq gene 190228 190300 . - . ID=gene-DDE35_RS00945;Name=DDE35_RS00945;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00945 NZ_CP029020.1 tRNAscan-SE tRNA 190228 190300 . - . ID=rna-DDE35_RS00945;Parent=gene-DDE35_RS00945;anticodon=(pos:complement(190265..190267));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00945;product=tRNA-Met NZ_CP029020.1 tRNAscan-SE exon 190228 190300 . - . ID=exon-DDE35_RS00945-1;Parent=rna-DDE35_RS00945;anticodon=(pos:complement(190265..190267));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00945;product=tRNA-Met NZ_CP029020.1 RefSeq gene 190365 191120 . - . ID=gene-DDE35_RS00950;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=DDE35_RS00950 NZ_CP029020.1 Protein Homology CDS 190365 191120 . - 0 ID=cds-WP_110504399.1;Parent=gene-DDE35_RS00950;Dbxref=Genbank:WP_110504399.1;Name=WP_110504399.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783997.1;locus_tag=DDE35_RS00950;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_110504399.1;transl_table=11 NZ_CP029020.1 RefSeq gene 191357 192439 . + . ID=gene-DDE35_RS00955;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=DDE35_RS00955 NZ_CP029020.1 Protein Homology CDS 191357 192439 . + 0 ID=cds-WP_110504401.1;Parent=gene-DDE35_RS00955;Dbxref=Genbank:WP_110504401.1;Name=WP_110504401.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799451.1;locus_tag=DDE35_RS00955;product=peptide chain release factor 2;protein_id=WP_110504401.1;transl_table=11 NZ_CP029020.1 RefSeq gene 192490 193221 . + . ID=gene-DDE35_RS00960;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=DDE35_RS00960 NZ_CP029020.1 Protein Homology CDS 192490 193221 . + 0 ID=cds-WP_110504403.1;Parent=gene-DDE35_RS00960;Dbxref=Genbank:WP_110504403.1;Name=WP_110504403.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799452.1;locus_tag=DDE35_RS00960;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_110504403.1;transl_table=11 NZ_CP029020.1 RefSeq gene 193223 194458 . + . ID=gene-DDE35_RS00965;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=DDE35_RS00965 NZ_CP029020.1 Protein Homology CDS 193223 194458 . + 0 ID=cds-WP_110504405.1;Parent=gene-DDE35_RS00965;Dbxref=Genbank:WP_110504405.1;Name=WP_110504405.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799453.1;locus_tag=DDE35_RS00965;product=signal peptidase I;protein_id=WP_110504405.1;transl_table=11 NZ_CP029020.1 RefSeq gene 194561 194773 . + . ID=gene-DDE35_RS00970;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=DDE35_RS00970 NZ_CP029020.1 Protein Homology CDS 194561 194773 . + 0 ID=cds-WP_110480203.1;Parent=gene-DDE35_RS00970;Dbxref=Genbank:WP_110480203.1;Name=WP_110480203.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821626.1;locus_tag=DDE35_RS00970;product=30S ribosomal protein S21;protein_id=WP_110480203.1;transl_table=11 NZ_CP029020.1 RefSeq gene 194775 195551 . + . ID=gene-DDE35_RS00975;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=DDE35_RS00975 NZ_CP029020.1 Protein Homology CDS 194775 195551 . + 0 ID=cds-WP_110504407.1;Parent=gene-DDE35_RS00975;Dbxref=Genbank:WP_110504407.1;Name=WP_110504407.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799455.1;locus_tag=DDE35_RS00975;product=shikimate dehydrogenase;protein_id=WP_110504407.1;transl_table=11 NZ_CP029020.1 RefSeq gene 195548 196528 . - . ID=gene-DDE35_RS00980;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=DDE35_RS00980 NZ_CP029020.1 Protein Homology CDS 195548 196528 . - 0 ID=cds-WP_110504408.1;Parent=gene-DDE35_RS00980;Dbxref=Genbank:WP_110504408.1;Name=WP_110504408.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799456.1;locus_tag=DDE35_RS00980;product=GTPase ObgE;protein_id=WP_110504408.1;transl_table=11 NZ_CP029020.1 RefSeq gene 196532 197935 . - . ID=gene-DDE35_RS00985;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=DDE35_RS00985 NZ_CP029020.1 Protein Homology CDS 196532 197935 . - 0 ID=cds-WP_110504410.1;Parent=gene-DDE35_RS00985;Dbxref=Genbank:WP_110504410.1;Name=WP_110504410.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743889.1;locus_tag=DDE35_RS00985;product=dihydrolipoyl dehydrogenase;protein_id=WP_110504410.1;transl_table=11 NZ_CP029020.1 RefSeq gene 197962 198046 . - . ID=gene-DDE35_RS00990;Name=DDE35_RS00990;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS00990 NZ_CP029020.1 tRNAscan-SE tRNA 197962 198046 . - . ID=rna-DDE35_RS00990;Parent=gene-DDE35_RS00990;anticodon=(pos:complement(198010..198012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00990;product=tRNA-Leu NZ_CP029020.1 tRNAscan-SE exon 197962 198046 . - . ID=exon-DDE35_RS00990-1;Parent=rna-DDE35_RS00990;anticodon=(pos:complement(198010..198012));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS00990;product=tRNA-Leu NZ_CP029020.1 RefSeq gene 198054 198497 . - . ID=gene-DDE35_RS00995;Name=DDE35_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS00995 NZ_CP029020.1 Protein Homology CDS 198054 198497 . - 0 ID=cds-WP_239493541.1;Parent=gene-DDE35_RS00995;Dbxref=Genbank:WP_239493541.1;Name=WP_239493541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799458.1;locus_tag=DDE35_RS00995;product=START-like domain-containing protein;protein_id=WP_239493541.1;transl_table=11 NZ_CP029020.1 RefSeq gene 198518 198591 . + . ID=gene-DDE35_RS01000;Name=DDE35_RS01000;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS01000 NZ_CP029020.1 tRNAscan-SE tRNA 198518 198591 . + . ID=rna-DDE35_RS01000;Parent=gene-DDE35_RS01000;anticodon=(pos:198552..198554);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS01000;product=tRNA-Met NZ_CP029020.1 tRNAscan-SE exon 198518 198591 . + . ID=exon-DDE35_RS01000-1;Parent=rna-DDE35_RS01000;anticodon=(pos:198552..198554);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS01000;product=tRNA-Met NZ_CP029020.1 RefSeq gene 198625 199974 . + . ID=gene-DDE35_RS01005;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=DDE35_RS01005 NZ_CP029020.1 Protein Homology CDS 198625 199974 . + 0 ID=cds-WP_110504413.1;Parent=gene-DDE35_RS01005;Dbxref=Genbank:WP_110504413.1;Name=WP_110504413.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: protein motif:HMM:TIGR00344.1;locus_tag=DDE35_RS01005;product=alanine--tRNA ligase;protein_id=WP_110504413.1;transl_table=11 NZ_CP029020.1 RefSeq gene 199967 202669 . + . ID=gene-DDE35_RS01010;Name=DDE35_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01010 NZ_CP029020.1 Protein Homology CDS 199967 202669 . + 0 ID=cds-WP_110504415.1;Parent=gene-DDE35_RS01010;Dbxref=Genbank:WP_110504415.1;Name=WP_110504415.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799460.1;locus_tag=DDE35_RS01010;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_110504415.1;transl_table=11 NZ_CP029020.1 RefSeq gene 202683 203801 . + . ID=gene-DDE35_RS01015;Name=DDE35_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01015 NZ_CP029020.1 Protein Homology CDS 202683 203801 . + 0 ID=cds-WP_110504417.1;Parent=gene-DDE35_RS01015;Dbxref=Genbank:WP_110504417.1;Name=WP_110504417.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799461.1;locus_tag=DDE35_RS01015;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_110504417.1;transl_table=11 NZ_CP029020.1 RefSeq gene 203828 204610 . + . ID=gene-DDE35_RS01020;Name=DDE35_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01020 NZ_CP029020.1 Protein Homology CDS 203828 204610 . + 0 ID=cds-WP_110504419.1;Parent=gene-DDE35_RS01020;Dbxref=Genbank:WP_110504419.1;Name=WP_110504419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799462.1;locus_tag=DDE35_RS01020;product=twin-arginine translocase subunit TatC;protein_id=WP_110504419.1;transl_table=11 NZ_CP029020.1 RefSeq gene 204614 205066 . - . ID=gene-DDE35_RS01025;Name=DDE35_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01025 NZ_CP029020.1 Protein Homology CDS 204614 205066 . - 0 ID=cds-WP_110504421.1;Parent=gene-DDE35_RS01025;Dbxref=Genbank:WP_110504421.1;Name=WP_110504421.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799463.1;locus_tag=DDE35_RS01025;product=SsrA-binding protein;protein_id=WP_110504421.1;transl_table=11 NZ_CP029020.1 RefSeq gene 205083 206696 . + . ID=gene-DDE35_RS01030;Name=DDE35_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01030 NZ_CP029020.1 Protein Homology CDS 205083 206696 . + 0 ID=cds-WP_110504423.1;Parent=gene-DDE35_RS01030;Dbxref=Genbank:WP_110504423.1;Name=WP_110504423.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799464.1;locus_tag=DDE35_RS01030;product=ATP-binding cassette domain-containing protein;protein_id=WP_110504423.1;transl_table=11 NZ_CP029020.1 RefSeq gene 206683 206985 . + . ID=gene-DDE35_RS01035;Name=DDE35_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01035 NZ_CP029020.1 Protein Homology CDS 206683 206985 . + 0 ID=cds-WP_110480221.1;Parent=gene-DDE35_RS01035;Dbxref=Genbank:WP_110480221.1;Name=WP_110480221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799465.1;locus_tag=DDE35_RS01035;product=iron-sulfur cluster assembly protein;protein_id=WP_110480221.1;transl_table=11 NZ_CP029020.1 RefSeq gene 207051 207395 . + . ID=gene-DDE35_RS01040;Name=DDE35_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01040 NZ_CP029020.1 Protein Homology CDS 207051 207395 . + 0 ID=cds-WP_110504424.1;Parent=gene-DDE35_RS01040;Dbxref=Genbank:WP_110504424.1;Name=WP_110504424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916269.1;locus_tag=DDE35_RS01040;product=DUF3127 domain-containing protein;protein_id=WP_110504424.1;transl_table=11 NZ_CP029020.1 RefSeq gene 207603 209237 . - . ID=gene-DDE35_RS01045;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=DDE35_RS01045 NZ_CP029020.1 Protein Homology CDS 207603 209237 . - 0 ID=cds-WP_110480224.1;Parent=gene-DDE35_RS01045;Dbxref=Genbank:WP_110480224.1;Name=WP_110480224.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743854.1;locus_tag=DDE35_RS01045;product=chaperonin GroEL;protein_id=WP_110480224.1;transl_table=11 NZ_CP029020.1 RefSeq gene 209309 209590 . - . ID=gene-DDE35_RS01050;Name=DDE35_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01050 NZ_CP029020.1 Protein Homology CDS 209309 209590 . - 0 ID=cds-WP_015799468.1;Parent=gene-DDE35_RS01050;Dbxref=Genbank:WP_015799468.1;Name=WP_015799468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019975019.1;locus_tag=DDE35_RS01050;product=co-chaperone GroES;protein_id=WP_015799468.1;transl_table=11 NZ_CP029020.1 RefSeq gene 209802 211166 . - . ID=gene-DDE35_RS01055;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=DDE35_RS01055 NZ_CP029020.1 Protein Homology CDS 209802 211166 . - 0 ID=cds-WP_110504426.1;Parent=gene-DDE35_RS01055;Dbxref=Genbank:WP_110504426.1;Name=WP_110504426.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799469.1;locus_tag=DDE35_RS01055;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_110504426.1;transl_table=11 NZ_CP029020.1 RefSeq gene 211209 212612 . + . ID=gene-DDE35_RS01060;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=DDE35_RS01060 NZ_CP029020.1 Protein Homology CDS 211209 212612 . + 0 ID=cds-WP_110504428.1;Parent=gene-DDE35_RS01060;Dbxref=Genbank:WP_110504428.1;Name=WP_110504428.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799470.1;locus_tag=DDE35_RS01060;product=Fe-S cluster assembly protein SufB;protein_id=WP_110504428.1;transl_table=11 NZ_CP029020.1 RefSeq gene 212629 213387 . + . ID=gene-DDE35_RS01065;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=DDE35_RS01065 NZ_CP029020.1 Protein Homology CDS 212629 213387 . + 0 ID=cds-WP_110504430.1;Parent=gene-DDE35_RS01065;Dbxref=Genbank:WP_110504430.1;Name=WP_110504430.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799471.1;locus_tag=DDE35_RS01065;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_110504430.1;transl_table=11 NZ_CP029020.1 RefSeq gene 213374 214684 . + . ID=gene-DDE35_RS01070;Name=DDE35_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01070 NZ_CP029020.1 Protein Homology CDS 213374 214684 . + 0 ID=cds-WP_110504554.1;Parent=gene-DDE35_RS01070;Dbxref=Genbank:WP_110504554.1;Name=WP_110504554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799472.1;locus_tag=DDE35_RS01070;product=SufD family Fe-S cluster assembly protein;protein_id=WP_110504554.1;transl_table=11 NZ_CP029020.1 RefSeq gene 214674 215894 . + . ID=gene-DDE35_RS01075;Name=DDE35_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01075 NZ_CP029020.1 Protein Homology CDS 214674 215894 . + 0 ID=cds-WP_110480232.1;Parent=gene-DDE35_RS01075;Dbxref=Genbank:WP_110480232.1;Name=WP_110480232.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799473.1;locus_tag=DDE35_RS01075;product=SufS family cysteine desulfurase;protein_id=WP_110480232.1;transl_table=11 NZ_CP029020.1 RefSeq gene 215947 216639 . + . ID=gene-DDE35_RS01080;Name=DDE35_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01080 NZ_CP029020.1 Protein Homology CDS 215947 216639 . + 0 ID=cds-WP_110504433.1;Parent=gene-DDE35_RS01080;Dbxref=Genbank:WP_110504433.1;Name=WP_110504433.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020118.2;locus_tag=DDE35_RS01080;product=hypothetical protein;protein_id=WP_110504433.1;transl_table=11 NZ_CP029020.1 RefSeq gene 216988 218589 . + . ID=gene-DDE35_RS01085;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=DDE35_RS01085 NZ_CP029020.1 Protein Homology CDS 216988 218589 . + 0 ID=cds-WP_110504435.1;Parent=gene-DDE35_RS01085;Dbxref=Genbank:WP_110504435.1;Name=WP_110504435.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: protein motif:HMM:TIGR00487.1;locus_tag=DDE35_RS01085;product=translation initiation factor IF-2;protein_id=WP_110504435.1;transl_table=11 NZ_CP029020.1 RefSeq gene 218622 219731 . - . ID=gene-DDE35_RS01090;Name=DDE35_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01090 NZ_CP029020.1 Protein Homology CDS 218622 219731 . - 0 ID=cds-WP_239493542.1;Parent=gene-DDE35_RS01090;Dbxref=Genbank:WP_239493542.1;Name=WP_239493542.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799476.1;locus_tag=DDE35_RS01090;product=chorismate mutase;protein_id=WP_239493542.1;transl_table=11 NZ_CP029020.1 RefSeq gene 219760 220914 . - . ID=gene-DDE35_RS01095;Name=DDE35_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01095 NZ_CP029020.1 Protein Homology CDS 219760 220914 . - 0 ID=cds-WP_110480240.1;Parent=gene-DDE35_RS01095;Dbxref=Genbank:WP_110480240.1;Name=WP_110480240.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799477.1;locus_tag=DDE35_RS01095;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_110480240.1;transl_table=11 NZ_CP029020.1 RefSeq gene 220911 221738 . - . ID=gene-DDE35_RS01100;Name=DDE35_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01100 NZ_CP029020.1 Protein Homology CDS 220911 221738 . - 0 ID=cds-WP_110504440.1;Parent=gene-DDE35_RS01100;Dbxref=Genbank:WP_110504440.1;Name=WP_110504440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799478.1;locus_tag=DDE35_RS01100;product=prephenate dehydratase;protein_id=WP_110504440.1;transl_table=11 NZ_CP029020.1 RefSeq gene 221752 222747 . - . ID=gene-DDE35_RS01105;Name=DDE35_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01105 NZ_CP029020.1 Protein Homology CDS 221752 222747 . - 0 ID=cds-WP_110480242.1;Parent=gene-DDE35_RS01105;Dbxref=Genbank:WP_110480242.1;Name=WP_110480242.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799479.1;locus_tag=DDE35_RS01105;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_110480242.1;transl_table=11 NZ_CP029020.1 RefSeq gene 222785 223045 . - . ID=gene-DDE35_RS01110;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=DDE35_RS01110 NZ_CP029020.1 Protein Homology CDS 222785 223045 . - 0 ID=cds-WP_110480244.1;Parent=gene-DDE35_RS01110;Dbxref=Genbank:WP_110480244.1;Name=WP_110480244.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799480.1;locus_tag=DDE35_RS01110;product=30S ribosomal protein S20;protein_id=WP_110480244.1;transl_table=11 NZ_CP029020.1 RefSeq gene 223068 223139 . - . ID=gene-DDE35_RS01115;Name=DDE35_RS01115;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS01115 NZ_CP029020.1 tRNAscan-SE tRNA 223068 223139 . - . ID=rna-DDE35_RS01115;Parent=gene-DDE35_RS01115;anticodon=(pos:complement(223104..223106));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS01115;product=tRNA-Glu NZ_CP029020.1 tRNAscan-SE exon 223068 223139 . - . ID=exon-DDE35_RS01115-1;Parent=rna-DDE35_RS01115;anticodon=(pos:complement(223104..223106));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS01115;product=tRNA-Glu NZ_CP029020.1 RefSeq gene 223152 224393 . - . ID=gene-DDE35_RS01120;Name=DDE35_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01120 NZ_CP029020.1 Protein Homology CDS 223152 224393 . - 0 ID=cds-WP_110504442.1;Parent=gene-DDE35_RS01120;Dbxref=Genbank:WP_110504442.1;Name=WP_110504442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038611.1;locus_tag=DDE35_RS01120;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_110504442.1;transl_table=11 NZ_CP029020.1 RefSeq gene 224365 224922 . - . ID=gene-DDE35_RS01125;Name=DDE35_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01125 NZ_CP029020.1 GeneMarkS-2+ CDS 224365 224922 . - 0 ID=cds-WP_110504444.1;Parent=gene-DDE35_RS01125;Dbxref=Genbank:WP_110504444.1;Name=WP_110504444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE35_RS01125;product=hypothetical protein;protein_id=WP_110504444.1;transl_table=11 NZ_CP029020.1 RefSeq gene 224929 225267 . - . ID=gene-DDE35_RS01130;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=DDE35_RS01130 NZ_CP029020.1 Protein Homology CDS 224929 225267 . - 0 ID=cds-WP_110480250.1;Parent=gene-DDE35_RS01130;Dbxref=Genbank:WP_110480250.1;Name=WP_110480250.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799483.1;locus_tag=DDE35_RS01130;product=30S ribosomal protein S16;protein_id=WP_110480250.1;transl_table=11 NZ_CP029020.1 RefSeq gene 225336 225406 . + . ID=gene-DDE35_RS01135;Name=DDE35_RS01135;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS01135 NZ_CP029020.1 tRNAscan-SE tRNA 225336 225406 . + . ID=rna-DDE35_RS01135;Parent=gene-DDE35_RS01135;anticodon=(pos:225368..225370);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS01135;product=tRNA-Gln NZ_CP029020.1 tRNAscan-SE exon 225336 225406 . + . ID=exon-DDE35_RS01135-1;Parent=rna-DDE35_RS01135;anticodon=(pos:225368..225370);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS01135;product=tRNA-Gln NZ_CP029020.1 RefSeq gene 225408 225890 . - . ID=gene-DDE35_RS01140;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=DDE35_RS01140 NZ_CP029020.1 Protein Homology CDS 225408 225890 . - 0 ID=cds-WP_110480252.1;Parent=gene-DDE35_RS01140;Dbxref=Genbank:WP_110480252.1;Name=WP_110480252.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greA;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014791362.1;locus_tag=DDE35_RS01140;product=transcription elongation factor GreA;protein_id=WP_110480252.1;transl_table=11 NZ_CP029020.1 RefSeq gene 225935 227854 . - . ID=gene-DDE35_RS01145;Name=DDE35_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01145 NZ_CP029020.1 Protein Homology CDS 225935 227854 . - 0 ID=cds-WP_110504446.1;Parent=gene-DDE35_RS01145;Dbxref=Genbank:WP_110504446.1;Name=WP_110504446.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799485.1;locus_tag=DDE35_RS01145;product=DNA gyrase subunit B;protein_id=WP_110504446.1;transl_table=11 NZ_CP029020.1 RefSeq gene 227868 228515 . - . ID=gene-DDE35_RS01150;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=DDE35_RS01150 NZ_CP029020.1 Protein Homology CDS 227868 228515 . - 0 ID=cds-WP_110504448.1;Parent=gene-DDE35_RS01150;Dbxref=Genbank:WP_110504448.1;Name=WP_110504448.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315653.1;locus_tag=DDE35_RS01150;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_110504448.1;transl_table=11 NZ_CP029020.1 RefSeq gene 228527 229705 . + . ID=gene-DDE35_RS01155;Name=DDE35_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01155 NZ_CP029020.1 Protein Homology CDS 228527 229705 . + 0 ID=cds-WP_110504450.1;Parent=gene-DDE35_RS01155;Dbxref=Genbank:WP_110504450.1;Name=WP_110504450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799487.1;locus_tag=DDE35_RS01155;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_110504450.1;transl_table=11 NZ_CP029020.1 RefSeq pseudogene 229837 229944 . - . ID=gene-DDE35_RS01495;Name=DDE35_RS01495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DDE35_RS01495;partial=true;pseudo=true;start_range=.,229837 NZ_CP029020.1 Protein Homology CDS 229837 229944 . - 0 ID=cds-DDE35_RS01495;Parent=gene-DDE35_RS01495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007842550.1;locus_tag=DDE35_RS01495;partial=true;product=type I methionyl aminopeptidase;pseudo=true;start_range=.,229837;transl_table=11 NZ_CP029020.1 RefSeq gene 229981 230169 . + . ID=gene-DDE35_RS01165;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=DDE35_RS01165 NZ_CP029020.1 Protein Homology CDS 229981 230169 . + 0 ID=cds-WP_110480260.1;Parent=gene-DDE35_RS01165;Dbxref=Genbank:WP_110480260.1;Name=WP_110480260.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799488.1;locus_tag=DDE35_RS01165;product=50S ribosomal protein L32;protein_id=WP_110480260.1;transl_table=11 NZ_CP029020.1 RefSeq gene 230144 231127 . - . ID=gene-DDE35_RS01170;Name=DDE35_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01170 NZ_CP029020.1 Protein Homology CDS 230144 231127 . - 0 ID=cds-WP_110504451.1;Parent=gene-DDE35_RS01170;Dbxref=Genbank:WP_110504451.1;Name=WP_110504451.1;Ontology_term=GO:0006086,GO:0004739;gbkey=CDS;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799489.1;locus_tag=DDE35_RS01170;product=pyruvate dehydrogenase complex E1 component subunit beta;protein_id=WP_110504451.1;transl_table=11 NZ_CP029020.1 RefSeq gene 231129 232178 . - . ID=gene-DDE35_RS01175;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=DDE35_RS01175 NZ_CP029020.1 Protein Homology CDS 231129 232178 . - 0 ID=cds-WP_110504453.1;Parent=gene-DDE35_RS01175;Dbxref=Genbank:WP_110504453.1;Name=WP_110504453.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799490.1;locus_tag=DDE35_RS01175;product=class II fructose-bisphosphate aldolase;protein_id=WP_110504453.1;transl_table=11 NZ_CP029020.1 RefSeq gene 232179 232298 . - . ID=gene-DDE35_RS01180;Name=DDE35_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01180 NZ_CP029020.1 Protein Homology CDS 232179 232298 . - 0 ID=cds-WP_239493543.1;Parent=gene-DDE35_RS01180;Dbxref=Genbank:WP_239493543.1;Name=WP_239493543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013216.2;locus_tag=DDE35_RS01180;product=hypothetical protein;protein_id=WP_239493543.1;transl_table=11 NZ_CP029020.1 RefSeq gene 233357 234247 . - . ID=gene-DDE35_RS01185;Name=DDE35_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01185 NZ_CP029020.1 Protein Homology CDS 233357 234247 . - 0 ID=cds-WP_110504457.1;Parent=gene-DDE35_RS01185;Dbxref=Genbank:WP_110504457.1;Name=WP_110504457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038617.1;locus_tag=DDE35_RS01185;product=RNA polymerase sigma factor RpoD/SigA;protein_id=WP_110504457.1;transl_table=11 NZ_CP029020.1 RefSeq gene 234259 236334 . - . ID=gene-DDE35_RS01190;Name=DDE35_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01190 NZ_CP029020.1 Protein Homology CDS 234259 236334 . - 0 ID=cds-WP_110504459.1;Parent=gene-DDE35_RS01190;Dbxref=Genbank:WP_110504459.1;Name=WP_110504459.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799492.1;locus_tag=DDE35_RS01190;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_110504459.1;transl_table=11 NZ_CP029020.1 RefSeq gene 236343 236624 . - . ID=gene-DDE35_RS01195;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=DDE35_RS01195 NZ_CP029020.1 Protein Homology CDS 236343 236624 . - 0 ID=cds-WP_110480272.1;Parent=gene-DDE35_RS01195;Dbxref=Genbank:WP_110480272.1;Name=WP_110480272.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015430115.1;locus_tag=DDE35_RS01195;product=30S ribosomal protein S15;protein_id=WP_110480272.1;transl_table=11 NZ_CP029020.1 RefSeq gene 236634 237353 . - . ID=gene-DDE35_RS01200;Name=DDE35_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01200 NZ_CP029020.1 Protein Homology CDS 236634 237353 . - 0 ID=cds-WP_110480274.1;Parent=gene-DDE35_RS01200;Dbxref=Genbank:WP_110480274.1;Name=WP_110480274.1;Ontology_term=GO:0008299,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799494.1;locus_tag=DDE35_RS01200;product=ubiquinone/menaquinone biosynthesis methyltransferase;protein_id=WP_110480274.1;transl_table=11 NZ_CP029020.1 RefSeq gene 237511 237753 . + . ID=gene-DDE35_RS01210;Name=DDE35_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01210 NZ_CP029020.1 Protein Homology CDS 237511 237753 . + 0 ID=cds-WP_110480276.1;Parent=gene-DDE35_RS01210;Dbxref=Genbank:WP_110480276.1;Name=WP_110480276.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799495.1;locus_tag=DDE35_RS01210;product=type B 50S ribosomal protein L31;protein_id=WP_110480276.1;transl_table=11 NZ_CP029020.1 RefSeq gene 237789 238163 . + . ID=gene-DDE35_RS01215;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=DDE35_RS01215 NZ_CP029020.1 Protein Homology CDS 237789 238163 . + 0 ID=cds-WP_015799496.1;Parent=gene-DDE35_RS01215;Dbxref=Genbank:WP_015799496.1;Name=WP_015799496.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006795815.1;locus_tag=DDE35_RS01215;product=30S ribosomal protein S12;protein_id=WP_015799496.1;transl_table=11 NZ_CP029020.1 RefSeq gene 238197 238673 . + . ID=gene-DDE35_RS01220;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=DDE35_RS01220 NZ_CP029020.1 Protein Homology CDS 238197 238673 . + 0 ID=cds-WP_110504464.1;Parent=gene-DDE35_RS01220;Dbxref=Genbank:WP_110504464.1;Name=WP_110504464.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007803600.1;locus_tag=DDE35_RS01220;product=30S ribosomal protein S7;protein_id=WP_110504464.1;transl_table=11 NZ_CP029020.1 RefSeq gene 238680 240770 . + . ID=gene-DDE35_RS01225;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=DDE35_RS01225 NZ_CP029020.1 Protein Homology CDS 238680 240770 . + 0 ID=cds-WP_110504466.1;Parent=gene-DDE35_RS01225;Dbxref=Genbank:WP_110504466.1;Name=WP_110504466.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038623.1;locus_tag=DDE35_RS01225;product=elongation factor G;protein_id=WP_110504466.1;transl_table=11 NZ_CP029020.1 RefSeq gene 240777 241088 . + . ID=gene-DDE35_RS01230;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=DDE35_RS01230 NZ_CP029020.1 Protein Homology CDS 240777 241088 . + 0 ID=cds-WP_110480280.1;Parent=gene-DDE35_RS01230;Dbxref=Genbank:WP_110480280.1;Name=WP_110480280.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002675011.1;locus_tag=DDE35_RS01230;product=30S ribosomal protein S10;protein_id=WP_110480280.1;transl_table=11 NZ_CP029020.1 RefSeq gene 241096 241713 . + . ID=gene-DDE35_RS01235;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=DDE35_RS01235 NZ_CP029020.1 Protein Homology CDS 241096 241713 . + 0 ID=cds-WP_110504468.1;Parent=gene-DDE35_RS01235;Dbxref=Genbank:WP_110504468.1;Name=WP_110504468.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799500.1;locus_tag=DDE35_RS01235;product=50S ribosomal protein L3;protein_id=WP_110504468.1;transl_table=11 NZ_CP029020.1 RefSeq gene 241717 242343 . + . ID=gene-DDE35_RS01240;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=DDE35_RS01240 NZ_CP029020.1 Protein Homology CDS 241717 242343 . + 0 ID=cds-WP_110504470.1;Parent=gene-DDE35_RS01240;Dbxref=Genbank:WP_110504470.1;Name=WP_110504470.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038625.1;locus_tag=DDE35_RS01240;product=50S ribosomal protein L4;protein_id=WP_110504470.1;transl_table=11 NZ_CP029020.1 RefSeq gene 242354 242941 . + . ID=gene-DDE35_RS01245;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=DDE35_RS01245 NZ_CP029020.1 Protein Homology CDS 242354 242941 . + 0 ID=cds-WP_162616678.1;Parent=gene-DDE35_RS01245;Dbxref=Genbank:WP_162616678.1;Name=WP_162616678.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF012498.2;locus_tag=DDE35_RS01245;product=50S ribosomal protein L23;protein_id=WP_162616678.1;transl_table=11 NZ_CP029020.1 RefSeq gene 242948 243766 . + . ID=gene-DDE35_RS01250;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=DDE35_RS01250 NZ_CP029020.1 Protein Homology CDS 242948 243766 . + 0 ID=cds-WP_110504473.1;Parent=gene-DDE35_RS01250;Dbxref=Genbank:WP_110504473.1;Name=WP_110504473.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007839515.1;locus_tag=DDE35_RS01250;product=50S ribosomal protein L2;protein_id=WP_110504473.1;transl_table=11 NZ_CP029020.1 RefSeq gene 243776 244072 . + . ID=gene-DDE35_RS01255;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=DDE35_RS01255 NZ_CP029020.1 Protein Homology CDS 243776 244072 . + 0 ID=cds-WP_110480288.1;Parent=gene-DDE35_RS01255;Dbxref=Genbank:WP_110480288.1;Name=WP_110480288.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799504.1;locus_tag=DDE35_RS01255;product=30S ribosomal protein S19;protein_id=WP_110480288.1;transl_table=11 NZ_CP029020.1 RefSeq gene 244074 244475 . + . ID=gene-DDE35_RS01260;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=DDE35_RS01260 NZ_CP029020.1 Protein Homology CDS 244074 244475 . + 0 ID=cds-WP_110504475.1;Parent=gene-DDE35_RS01260;Dbxref=Genbank:WP_110504475.1;Name=WP_110504475.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799505.1;locus_tag=DDE35_RS01260;product=50S ribosomal protein L22;protein_id=WP_110504475.1;transl_table=11 NZ_CP029020.1 RefSeq gene 244460 245176 . + . ID=gene-DDE35_RS01265;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=DDE35_RS01265 NZ_CP029020.1 Protein Homology CDS 244460 245176 . + 0 ID=cds-WP_110504476.1;Parent=gene-DDE35_RS01265;Dbxref=Genbank:WP_110504476.1;Name=WP_110504476.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799506.1;locus_tag=DDE35_RS01265;product=30S ribosomal protein S3;protein_id=WP_110504476.1;transl_table=11 NZ_CP029020.1 RefSeq gene 245189 245599 . + . ID=gene-DDE35_RS01270;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=DDE35_RS01270 NZ_CP029020.1 Protein Homology CDS 245189 245599 . + 0 ID=cds-WP_015799507.1;Parent=gene-DDE35_RS01270;Dbxref=Genbank:WP_015799507.1;Name=WP_015799507.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315674.1;locus_tag=DDE35_RS01270;product=50S ribosomal protein L16;protein_id=WP_015799507.1;transl_table=11 NZ_CP029020.1 RefSeq gene 245592 245843 . + . ID=gene-DDE35_RS01275;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=DDE35_RS01275 NZ_CP029020.1 Protein Homology CDS 245592 245843 . + 0 ID=cds-WP_110480294.1;Parent=gene-DDE35_RS01275;Dbxref=Genbank:WP_110480294.1;Name=WP_110480294.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743743.1;locus_tag=DDE35_RS01275;product=30S ribosomal protein S17;protein_id=WP_110480294.1;transl_table=11 NZ_CP029020.1 RefSeq gene 245845 246213 . + . ID=gene-DDE35_RS01280;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=DDE35_RS01280 NZ_CP029020.1 Protein Homology CDS 245845 246213 . + 0 ID=cds-WP_110480296.1;Parent=gene-DDE35_RS01280;Dbxref=Genbank:WP_110480296.1;Name=WP_110480296.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743742.1;locus_tag=DDE35_RS01280;product=50S ribosomal protein L14;protein_id=WP_110480296.1;transl_table=11 NZ_CP029020.1 RefSeq gene 246210 246476 . + . ID=gene-DDE35_RS01285;Name=DDE35_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01285 NZ_CP029020.1 Protein Homology CDS 246210 246476 . + 0 ID=cds-WP_110504478.1;Parent=gene-DDE35_RS01285;Dbxref=Genbank:WP_110504478.1;Name=WP_110504478.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028446.2;locus_tag=DDE35_RS01285;product=hypothetical protein;protein_id=WP_110504478.1;transl_table=11 NZ_CP029020.1 RefSeq gene 246489 247043 . + . ID=gene-DDE35_RS01290;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=DDE35_RS01290 NZ_CP029020.1 Protein Homology CDS 246489 247043 . + 0 ID=cds-WP_110504480.1;Parent=gene-DDE35_RS01290;Dbxref=Genbank:WP_110504480.1;Name=WP_110504480.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799511.1;locus_tag=DDE35_RS01290;product=50S ribosomal protein L5;protein_id=WP_110504480.1;transl_table=11 NZ_CP029020.1 RefSeq gene 247067 247336 . + . ID=gene-DDE35_RS01295;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=DDE35_RS01295 NZ_CP029020.1 Protein Homology CDS 247067 247336 . + 0 ID=cds-WP_015799512.1;Parent=gene-DDE35_RS01295;Dbxref=Genbank:WP_015799512.1;Name=WP_015799512.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738440.1;locus_tag=DDE35_RS01295;product=30S ribosomal protein S14;protein_id=WP_015799512.1;transl_table=11 NZ_CP029020.1 RefSeq gene 247360 247761 . + . ID=gene-DDE35_RS01300;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=DDE35_RS01300 NZ_CP029020.1 Protein Homology CDS 247360 247761 . + 0 ID=cds-WP_110504482.1;Parent=gene-DDE35_RS01300;Dbxref=Genbank:WP_110504482.1;Name=WP_110504482.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743739.1;locus_tag=DDE35_RS01300;product=30S ribosomal protein S8;protein_id=WP_110504482.1;transl_table=11 NZ_CP029020.1 RefSeq gene 247799 248347 . + . ID=gene-DDE35_RS01305;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=DDE35_RS01305 NZ_CP029020.1 Protein Homology CDS 247799 248347 . + 0 ID=cds-WP_110480304.1;Parent=gene-DDE35_RS01305;Dbxref=Genbank:WP_110480304.1;Name=WP_110480304.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038631.1;locus_tag=DDE35_RS01305;product=50S ribosomal protein L6;protein_id=WP_110480304.1;transl_table=11 NZ_CP029020.1 RefSeq gene 248348 248665 . + . ID=gene-DDE35_RS01310;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=DDE35_RS01310 NZ_CP029020.1 Protein Homology CDS 248348 248665 . + 0 ID=cds-WP_110480306.1;Parent=gene-DDE35_RS01310;Dbxref=Genbank:WP_110480306.1;Name=WP_110480306.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743736.1;locus_tag=DDE35_RS01310;product=50S ribosomal protein L18;protein_id=WP_110480306.1;transl_table=11 NZ_CP029020.1 RefSeq gene 248671 249210 . + . ID=gene-DDE35_RS01315;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=DDE35_RS01315 NZ_CP029020.1 Protein Homology CDS 248671 249210 . + 0 ID=cds-WP_110480359.1;Parent=gene-DDE35_RS01315;Dbxref=Genbank:WP_110480359.1;Name=WP_110480359.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008613581.1;locus_tag=DDE35_RS01315;product=30S ribosomal protein S5;protein_id=WP_110480359.1;transl_table=11 NZ_CP029020.1 RefSeq gene 249213 249359 . + . ID=gene-DDE35_RS01480;Name=DDE35_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01480 NZ_CP029020.1 Protein Homology CDS 249213 249359 . + 0 ID=cds-WP_162616674.1;Parent=gene-DDE35_RS01480;Dbxref=Genbank:WP_162616674.1;Name=WP_162616674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013869026.1;locus_tag=DDE35_RS01480;product=hypothetical protein;protein_id=WP_162616674.1;transl_table=11 NZ_CP029020.1 RefSeq gene 249346 249795 . + . ID=gene-DDE35_RS01320;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=DDE35_RS01320 NZ_CP029020.1 Protein Homology CDS 249346 249795 . + 0 ID=cds-WP_110480360.1;Parent=gene-DDE35_RS01320;Dbxref=Genbank:WP_110480360.1;Name=WP_110480360.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799517.1;locus_tag=DDE35_RS01320;product=50S ribosomal protein L15;protein_id=WP_110480360.1;transl_table=11 NZ_CP029020.1 RefSeq gene 249799 251121 . + . ID=gene-DDE35_RS01325;Name=DDE35_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01325 NZ_CP029020.1 Protein Homology CDS 249799 251121 . + 0 ID=cds-WP_110504483.1;Parent=gene-DDE35_RS01325;Dbxref=Genbank:WP_110504483.1;Name=WP_110504483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315685.1;locus_tag=DDE35_RS01325;product=preprotein translocase subunit SecY;protein_id=WP_110504483.1;transl_table=11 NZ_CP029020.1 RefSeq gene 251129 251344 . + . ID=gene-DDE35_RS01330;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=DDE35_RS01330 NZ_CP029020.1 Protein Homology CDS 251129 251344 . + 0 ID=cds-WP_015799518.1;Parent=gene-DDE35_RS01330;Dbxref=Genbank:WP_015799518.1;Name=WP_015799518.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009779202.1;locus_tag=DDE35_RS01330;product=translation initiation factor IF-1;protein_id=WP_015799518.1;transl_table=11 NZ_CP029020.1 RefSeq gene 251358 251474 . + . ID=gene-DDE35_RS01335;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=DDE35_RS01335 NZ_CP029020.1 Protein Homology CDS 251358 251474 . + 0 ID=cds-WP_015799519.1;Parent=gene-DDE35_RS01335;Dbxref=Genbank:WP_015799519.1;Name=WP_015799519.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmJ;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014790280.1;locus_tag=DDE35_RS01335;product=50S ribosomal protein L36;protein_id=WP_015799519.1;transl_table=11 NZ_CP029020.1 RefSeq gene 251479 251898 . + . ID=gene-DDE35_RS01340;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=DDE35_RS01340 NZ_CP029020.1 Protein Homology CDS 251479 251898 . + 0 ID=cds-WP_110480310.1;Parent=gene-DDE35_RS01340;Dbxref=Genbank:WP_110480310.1;Name=WP_110480310.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799520.1;locus_tag=DDE35_RS01340;product=30S ribosomal protein S13;protein_id=WP_110480310.1;transl_table=11 NZ_CP029020.1 RefSeq gene 251914 252294 . + . ID=gene-DDE35_RS01345;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=DDE35_RS01345 NZ_CP029020.1 Protein Homology CDS 251914 252294 . + 0 ID=cds-WP_110504485.1;Parent=gene-DDE35_RS01345;Dbxref=Genbank:WP_110504485.1;Name=WP_110504485.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014158815.1;locus_tag=DDE35_RS01345;product=30S ribosomal protein S11;protein_id=WP_110504485.1;transl_table=11 NZ_CP029020.1 RefSeq gene 252312 252983 . + . ID=gene-DDE35_RS01350;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=DDE35_RS01350 NZ_CP029020.1 Protein Homology CDS 252312 252983 . + 0 ID=cds-WP_110504487.1;Parent=gene-DDE35_RS01350;Dbxref=Genbank:WP_110504487.1;Name=WP_110504487.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821516.1;locus_tag=DDE35_RS01350;product=30S ribosomal protein S4;protein_id=WP_110504487.1;transl_table=11 NZ_CP029020.1 RefSeq gene 253005 254030 . + . ID=gene-DDE35_RS01355;Name=DDE35_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01355 NZ_CP029020.1 Protein Homology CDS 253005 254030 . + 0 ID=cds-WP_110504489.1;Parent=gene-DDE35_RS01355;Dbxref=Genbank:WP_110504489.1;Name=WP_110504489.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799523.1;locus_tag=DDE35_RS01355;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_110504489.1;transl_table=11 NZ_CP029020.1 RefSeq gene 254027 254395 . + . ID=gene-DDE35_RS01360;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=DDE35_RS01360 NZ_CP029020.1 Protein Homology CDS 254027 254395 . + 0 ID=cds-WP_015799524.1;Parent=gene-DDE35_RS01360;Dbxref=Genbank:WP_015799524.1;Name=WP_015799524.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315692.1;locus_tag=DDE35_RS01360;product=50S ribosomal protein L17;protein_id=WP_015799524.1;transl_table=11 NZ_CP029020.1 RefSeq gene 254392 255177 . - . ID=gene-DDE35_RS01365;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=DDE35_RS01365 NZ_CP029020.1 Protein Homology CDS 254392 255177 . - 0 ID=cds-WP_110480316.1;Parent=gene-DDE35_RS01365;Dbxref=Genbank:WP_110480316.1;Name=WP_110480316.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799525.1;locus_tag=DDE35_RS01365;product=diaminopimelate epimerase;protein_id=WP_110480316.1;transl_table=11 NZ_CP029020.1 RefSeq gene 255239 256150 . + . ID=gene-DDE35_RS01370;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=DDE35_RS01370 NZ_CP029020.1 Protein Homology CDS 255239 256150 . + 0 ID=cds-WP_110504491.1;Parent=gene-DDE35_RS01370;Dbxref=Genbank:WP_110504491.1;Name=WP_110504491.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743932.1;locus_tag=DDE35_RS01370;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_110504491.1;transl_table=11 NZ_CP029020.1 RefSeq gene 256140 256460 . - . ID=gene-DDE35_RS01375;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=DDE35_RS01375 NZ_CP029020.1 cmsearch RNase_P_RNA 256140 256460 . - . ID=rna-DDE35_RS01375;Parent=gene-DDE35_RS01375;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS01375;product=RNase P RNA component class A NZ_CP029020.1 cmsearch exon 256140 256460 . - . ID=exon-DDE35_RS01375-1;Parent=rna-DDE35_RS01375;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE35_RS01375;product=RNase P RNA component class A NZ_CP029020.1 RefSeq gene 256478 257845 . - . ID=gene-DDE35_RS01380;Name=DDE35_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01380 NZ_CP029020.1 Protein Homology CDS 256478 257845 . - 0 ID=cds-WP_110504493.1;Parent=gene-DDE35_RS01380;Dbxref=Genbank:WP_110504493.1;Name=WP_110504493.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799526.1;locus_tag=DDE35_RS01380;product=aldehyde dehydrogenase family protein;protein_id=WP_110504493.1;transl_table=11 NZ_CP029020.1 RefSeq gene 257846 259456 . - . ID=gene-DDE35_RS01385;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=DDE35_RS01385 NZ_CP029020.1 Protein Homology CDS 257846 259456 . - 0 ID=cds-WP_110504495.1;Parent=gene-DDE35_RS01385;Dbxref=Genbank:WP_110504495.1;Name=WP_110504495.1;Ontology_term=GO:0006298,GO:0016887;gbkey=CDS;gene=mutL;go_function=ATP hydrolysis activity|0016887||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799527.1;locus_tag=DDE35_RS01385;product=DNA mismatch repair endonuclease MutL;protein_id=WP_110504495.1;transl_table=11 NZ_CP029020.1 RefSeq gene 259520 260854 . + . ID=gene-DDE35_RS01390;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=DDE35_RS01390 NZ_CP029020.1 Protein Homology CDS 259520 260854 . + 0 ID=cds-WP_110504497.1;Parent=gene-DDE35_RS01390;Dbxref=Genbank:WP_110504497.1;Name=WP_110504497.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799528.1;locus_tag=DDE35_RS01390;product=argininosuccinate lyase;protein_id=WP_110504497.1;transl_table=11 NZ_CP029020.1 RefSeq gene 260865 262370 . - . ID=gene-DDE35_RS01395;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=DDE35_RS01395 NZ_CP029020.1 Protein Homology CDS 260865 262370 . - 0 ID=cds-WP_110504500.1;Parent=gene-DDE35_RS01395;Dbxref=Genbank:WP_110504500.1;Name=WP_110504500.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799529.1;locus_tag=DDE35_RS01395;product=lysine--tRNA ligase;protein_id=WP_110504500.1;transl_table=11 NZ_CP029020.1 RefSeq gene 262412 262485 . - . ID=gene-DDE35_RS01400;Name=DDE35_RS01400;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE35_RS01400 NZ_CP029020.1 tRNAscan-SE tRNA 262412 262485 . - . ID=rna-DDE35_RS01400;Parent=gene-DDE35_RS01400;anticodon=(pos:complement(262449..262451));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS01400;product=tRNA-Arg NZ_CP029020.1 tRNAscan-SE exon 262412 262485 . - . ID=exon-DDE35_RS01400-1;Parent=rna-DDE35_RS01400;anticodon=(pos:complement(262449..262451));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE35_RS01400;product=tRNA-Arg NZ_CP029020.1 RefSeq gene 262565 263566 . + . ID=gene-DDE35_RS01405;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=DDE35_RS01405 NZ_CP029020.1 Protein Homology CDS 262565 263566 . + 0 ID=cds-WP_110504502.1;Parent=gene-DDE35_RS01405;Dbxref=Genbank:WP_110504502.1;Name=WP_110504502.1;Ontology_term=GO:0006086,GO:0004739,GO:0045250;gbkey=CDS;gene=pdhA;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799530.1;locus_tag=DDE35_RS01405;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_110504502.1;transl_table=11 NZ_CP029020.1 RefSeq gene 263570 264691 . + . ID=gene-DDE35_RS01410;Name=DDE35_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01410 NZ_CP029020.1 Protein Homology CDS 263570 264691 . + 0 ID=cds-WP_110504504.1;Parent=gene-DDE35_RS01410;Dbxref=Genbank:WP_110504504.1;Name=WP_110504504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799531.1;locus_tag=DDE35_RS01410;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_110504504.1;transl_table=11 NZ_CP029020.1 RefSeq gene 264683 265405 . - . ID=gene-DDE35_RS01415;Name=DDE35_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01415 NZ_CP029020.1 Protein Homology CDS 264683 265405 . - 0 ID=cds-WP_110504506.1;Parent=gene-DDE35_RS01415;Dbxref=Genbank:WP_110504506.1;Name=WP_110504506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799532.1;locus_tag=DDE35_RS01415;product=DUF475 domain-containing protein;protein_id=WP_110504506.1;transl_table=11 NZ_CP029020.1 RefSeq gene 265472 266482 . + . ID=gene-DDE35_RS01420;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=DDE35_RS01420 NZ_CP029020.1 Protein Homology CDS 265472 266482 . + 0 ID=cds-WP_110504508.1;Parent=gene-DDE35_RS01420;Dbxref=Genbank:WP_110504508.1;Name=WP_110504508.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799533.1;locus_tag=DDE35_RS01420;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_110504508.1;transl_table=11 NZ_CP029020.1 RefSeq gene 266573 266998 . - . ID=gene-DDE35_RS01425;Name=DDE35_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01425 NZ_CP029020.1 Protein Homology CDS 266573 266998 . - 0 ID=cds-WP_204352331.1;Parent=gene-DDE35_RS01425;Dbxref=Genbank:WP_204352331.1;Name=WP_204352331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799534.1;locus_tag=DDE35_RS01425;product=type I restriction enzyme HsdR N-terminal domain-containing protein;protein_id=WP_204352331.1;transl_table=11 NZ_CP029020.1 RefSeq gene 267003 267974 . + . ID=gene-DDE35_RS01430;Name=DDE35_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01430 NZ_CP029020.1 Protein Homology CDS 267003 267974 . + 0 ID=cds-WP_110504510.1;Parent=gene-DDE35_RS01430;Dbxref=Genbank:WP_110504510.1;Name=WP_110504510.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017911.2;locus_tag=DDE35_RS01430;product=hypothetical protein;protein_id=WP_110504510.1;transl_table=11 NZ_CP029020.1 RefSeq gene 267979 268914 . + . ID=gene-DDE35_RS01435;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=DDE35_RS01435 NZ_CP029020.1 Protein Homology CDS 267979 268914 . + 0 ID=cds-WP_110504512.1;Parent=gene-DDE35_RS01435;Dbxref=Genbank:WP_110504512.1;Name=WP_110504512.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799536.1;locus_tag=DDE35_RS01435;product=thioredoxin-disulfide reductase;protein_id=WP_110504512.1;transl_table=11 NZ_CP029020.1 RefSeq gene 268911 269657 . + . ID=gene-DDE35_RS01440;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=DDE35_RS01440 NZ_CP029020.1 Protein Homology CDS 268911 269657 . + 0 ID=cds-WP_110504514.1;Parent=gene-DDE35_RS01440;Dbxref=Genbank:WP_110504514.1;Name=WP_110504514.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726582.1;locus_tag=DDE35_RS01440;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_110504514.1;transl_table=11 NZ_CP029020.1 RefSeq gene 269654 270649 . - . ID=gene-DDE35_RS01445;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=DDE35_RS01445 NZ_CP029020.1 Protein Homology CDS 269654 270649 . - 0 ID=cds-WP_110504516.1;Parent=gene-DDE35_RS01445;Dbxref=Genbank:WP_110504516.1;Name=WP_110504516.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220899.1;locus_tag=DDE35_RS01445;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_110504516.1;transl_table=11 NZ_CP029020.1 RefSeq gene 270673 271932 . - . ID=gene-DDE35_RS01450;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=DDE35_RS01450 NZ_CP029020.1 Protein Homology CDS 270673 271932 . - 0 ID=cds-WP_110504518.1;Parent=gene-DDE35_RS01450;Dbxref=Genbank:WP_110504518.1;Name=WP_110504518.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220898.1;locus_tag=DDE35_RS01450;product=threonine ammonia-lyase;protein_id=WP_110504518.1;transl_table=11 NZ_CP029020.1 RefSeq gene 272065 273099 . - . ID=gene-DDE35_RS01455;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=DDE35_RS01455 NZ_CP029020.1 Protein Homology CDS 272065 273099 . - 0 ID=cds-WP_110480334.1;Parent=gene-DDE35_RS01455;Dbxref=Genbank:WP_110480334.1;Name=WP_110480334.1;Ontology_term=GO:0009097,GO:0009099,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743785.1;locus_tag=DDE35_RS01455;product=ketol-acid reductoisomerase;protein_id=WP_110480334.1;transl_table=11 NZ_CP029020.1 RefSeq gene 273108 273368 . - . ID=gene-DDE35_RS01460;Name=DDE35_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE35_RS01460 NZ_CP029020.1 Protein Homology CDS 273108 273368 . - 0 ID=cds-WP_239493544.1;Parent=gene-DDE35_RS01460;Dbxref=Genbank:WP_239493544.1;Name=WP_239493544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799541.1;locus_tag=DDE35_RS01460;product=acetolactate synthase;protein_id=WP_239493544.1;transl_table=11 NZ_CP029020.1 RefSeq gene 273373 275070 . - . ID=gene-DDE35_RS01465;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=DDE35_RS01465 NZ_CP029020.1 Protein Homology CDS 273373 275070 . - 0 ID=cds-WP_110504520.1;Parent=gene-DDE35_RS01465;Dbxref=Genbank:WP_110504520.1;Name=WP_110504520.1;Ontology_term=GO:0009097,GO:0009099,GO:0003984,GO:0005948;gbkey=CDS;gene=ilvB;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase activity|0003984||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799542.1;locus_tag=DDE35_RS01465;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_110504520.1;transl_table=11 NZ_CP029020.1 RefSeq gene 275073 276755 . - . ID=gene-DDE35_RS01470;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=DDE35_RS01470 NZ_CP029020.1 Protein Homology CDS 275073 276755 . - 0 ID=cds-WP_110504522.1;Parent=gene-DDE35_RS01470;Dbxref=Genbank:WP_110504522.1;Name=WP_110504522.1;Ontology_term=GO:0009097,GO:0009099,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799543.1;locus_tag=DDE35_RS01470;product=dihydroxy-acid dehydratase;protein_id=WP_110504522.1;transl_table=11 ###