##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM321478v1 #!genome-build-accession NCBI_Assembly:GCF_003214785.1 #!annotation-date 10/05/2022 18:07:43 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP029009.1 1 273226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=336810 NZ_CP029009.1 RefSeq region 1 273226 . + . ID=NZ_CP029009.1:1..273226;Dbxref=taxon:336810;Is_circular=true;Name=ANONYMOUS;collected-by=Keisuke Shimada;collection-date=2015-08-15;country=Japan: Ishikawa%2C Kanazawa;gbkey=Src;genome=chromosome;isolate=SMCRYATR;mol_type=genomic DNA;nat-host=Cryptotympana atrata NZ_CP029009.1 RefSeq gene 1 675 . + . ID=gene-DDE57_RS00005;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=DDE57_RS00005 NZ_CP029009.1 Protein Homology CDS 1 675 . + 0 ID=cds-WP_110473338.1;Parent=gene-DDE57_RS00005;Dbxref=Genbank:WP_110473338.1;Name=WP_110473338.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315467.1;locus_tag=DDE57_RS00005;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_110473338.1;transl_table=11 NZ_CP029009.1 RefSeq gene 672 1826 . - . ID=gene-DDE57_RS00010;Name=DDE57_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00010 NZ_CP029009.1 Protein Homology CDS 672 1826 . - 0 ID=cds-WP_110473339.1;Parent=gene-DDE57_RS00010;Dbxref=Genbank:WP_110473339.1;Name=WP_110473339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002672347.1;locus_tag=DDE57_RS00010;product=class II fumarate hydratase;protein_id=WP_110473339.1;transl_table=11 NZ_CP029009.1 RefSeq gene 1882 3516 . + . ID=gene-DDE57_RS00015;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=DDE57_RS00015 NZ_CP029009.1 Protein Homology CDS 1882 3516 . + 0 ID=cds-WP_239493728.1;Parent=gene-DDE57_RS00015;Dbxref=Genbank:WP_239493728.1;Name=WP_239493728.1;Ontology_term=GO:0051205,GO:0003674;gbkey=CDS;gene=yidC;go_function=molecular_function|0003674||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783983.1;locus_tag=DDE57_RS00015;product=membrane protein insertase YidC;protein_id=WP_239493728.1;transl_table=11 NZ_CP029009.1 RefSeq gene 3513 6143 . + . ID=gene-DDE57_RS00020;Name=DDE57_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00020 NZ_CP029009.1 Protein Homology CDS 3513 6143 . + 0 ID=cds-WP_110473341.1;Parent=gene-DDE57_RS00020;Dbxref=Genbank:WP_110473341.1;Name=WP_110473341.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012221049.1;locus_tag=DDE57_RS00020;product=valine--tRNA ligase;protein_id=WP_110473341.1;transl_table=11 NZ_CP029009.1 RefSeq gene 6124 7239 . + . ID=gene-DDE57_RS00025;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=DDE57_RS00025 NZ_CP029009.1 Protein Homology CDS 6124 7239 . + 0 ID=cds-WP_110473342.1;Parent=gene-DDE57_RS00025;Dbxref=Genbank:WP_110473342.1;Name=WP_110473342.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783985.1;locus_tag=DDE57_RS00025;product=DNA polymerase III subunit beta;protein_id=WP_110473342.1;transl_table=11 NZ_CP029009.1 RefSeq gene 7236 9281 . + . ID=gene-DDE57_RS00030;Name=DDE57_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00030 NZ_CP029009.1 Protein Homology CDS 7236 9281 . + 0 ID=cds-WP_110473343.1;Parent=gene-DDE57_RS00030;Dbxref=Genbank:WP_110473343.1;Name=WP_110473343.1;Ontology_term=GO:0003723,GO:0004826;gbkey=CDS;go_function=RNA binding|0003723||IEA,phenylalanine-tRNA ligase activity|0004826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783986.1;locus_tag=DDE57_RS00030;product=phenylalanine--tRNA ligase beta subunit-related protein;protein_id=WP_110473343.1;transl_table=11 NZ_CP029009.1 RefSeq gene 9305 10384 . + . ID=gene-DDE57_RS00035;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=DDE57_RS00035 NZ_CP029009.1 Protein Homology CDS 9305 10384 . + 0 ID=cds-WP_012783987.1;Parent=gene-DDE57_RS00035;Dbxref=Genbank:WP_012783987.1;Name=WP_012783987.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315473.1;locus_tag=DDE57_RS00035;product=3-dehydroquinate synthase;protein_id=WP_012783987.1;transl_table=11 NZ_CP029009.1 RefSeq pseudogene 10399 11893 . + . ID=gene-DDE57_RS00040;Name=DDE57_RS00040;end_range=11893,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=DDE57_RS00040;partial=true;pseudo=true NZ_CP029009.1 Protein Homology CDS 10399 11893 . + 0 ID=cds-DDE57_RS00040;Parent=gene-DDE57_RS00040;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11893,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038474.1;locus_tag=DDE57_RS00040;partial=true;product=DNA gyrase subunit A;pseudo=true;transl_table=11 NZ_CP029009.1 RefSeq gene 12184 14076 . + . ID=gene-DDE57_RS00045;Name=DDE57_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00045 NZ_CP029009.1 Protein Homology CDS 12184 14076 . + 0 ID=cds-WP_110473344.1;Parent=gene-DDE57_RS00045;Dbxref=Genbank:WP_110473344.1;Name=WP_110473344.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783989.1;locus_tag=DDE57_RS00045;product=S1 RNA-binding domain-containing protein;protein_id=WP_110473344.1;transl_table=11 NZ_CP029009.1 RefSeq gene 14080 14751 . + . ID=gene-DDE57_RS00050;Name=DDE57_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00050 NZ_CP029009.1 Protein Homology CDS 14080 14751 . + 0 ID=cds-WP_110473345.1;Parent=gene-DDE57_RS00050;Dbxref=Genbank:WP_110473345.1;Name=WP_110473345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783990.1;locus_tag=DDE57_RS00050;product=class I SAM-dependent methyltransferase;protein_id=WP_110473345.1;transl_table=11 NZ_CP029009.1 RefSeq gene 14753 16000 . + . ID=gene-DDE57_RS00055;Name=DDE57_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00055 NZ_CP029009.1 Protein Homology CDS 14753 16000 . + 0 ID=cds-WP_110473346.1;Parent=gene-DDE57_RS00055;Dbxref=Genbank:WP_110473346.1;Name=WP_110473346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370585.1;locus_tag=DDE57_RS00055;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_110473346.1;transl_table=11 NZ_CP029009.1 RefSeq gene 16016 17281 . - . ID=gene-DDE57_RS00060;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=DDE57_RS00060 NZ_CP029009.1 Protein Homology CDS 16016 17281 . - 0 ID=cds-WP_110473347.1;Parent=gene-DDE57_RS00060;Dbxref=Genbank:WP_110473347.1;Name=WP_110473347.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012221041.1;locus_tag=DDE57_RS00060;product=transcription termination factor Rho;protein_id=WP_110473347.1;transl_table=11 NZ_CP029009.1 RefSeq gene 17326 18384 . + . ID=gene-DDE57_RS00065;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=DDE57_RS00065 NZ_CP029009.1 Protein Homology CDS 17326 18384 . + 0 ID=cds-WP_110473348.1;Parent=gene-DDE57_RS00065;Dbxref=Genbank:WP_110473348.1;Name=WP_110473348.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783993.1;locus_tag=DDE57_RS00065;product=peptide chain release factor 1;protein_id=WP_110473348.1;transl_table=11 NZ_CP029009.1 RefSeq gene 18588 19019 . + . ID=gene-DDE57_RS00070;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=DDE57_RS00070 NZ_CP029009.1 Protein Homology CDS 18588 19019 . + 0 ID=cds-WP_110473544.1;Parent=gene-DDE57_RS00070;Dbxref=Genbank:WP_110473544.1;Name=WP_110473544.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783994.1;locus_tag=DDE57_RS00070;product=type II 3-dehydroquinate dehydratase;protein_id=WP_110473544.1;transl_table=11 NZ_CP029009.1 RefSeq gene 19023 19319 . - . ID=gene-DDE57_RS00075;Name=DDE57_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00075 NZ_CP029009.1 Protein Homology CDS 19023 19319 . - 0 ID=cds-WP_110473349.1;Parent=gene-DDE57_RS00075;Dbxref=Genbank:WP_110473349.1;Name=WP_110473349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783995.1;locus_tag=DDE57_RS00075;product=ATP synthase F1 subunit epsilon;protein_id=WP_110473349.1;transl_table=11 NZ_CP029009.1 RefSeq pseudogene 19709 21175 . - . ID=gene-DDE57_RS00085;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=pseudogene;locus_tag=DDE57_RS00085;partial=true;pseudo=true;start_range=.,19709 NZ_CP029009.1 Protein Homology CDS 19709 21175 . - 0 ID=cds-DDE57_RS00085;Parent=gene-DDE57_RS00085;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315484.1;locus_tag=DDE57_RS00085;partial=true;product=F0F1 ATP synthase subunit beta;pseudo=true;start_range=.,19709;transl_table=11 NZ_CP029009.1 RefSeq gene 21227 22111 . + . ID=gene-DDE57_RS00090;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=DDE57_RS00090 NZ_CP029009.1 Protein Homology CDS 21227 22111 . + 0 ID=cds-WP_110473350.1;Parent=gene-DDE57_RS00090;Dbxref=Genbank:WP_110473350.1;Name=WP_110473350.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799450.1;locus_tag=DDE57_RS00090;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_110473350.1;transl_table=11 NZ_CP029009.1 RefSeq gene 22116 23861 . + . ID=gene-DDE57_RS00095;Name=DDE57_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00095 NZ_CP029009.1 Protein Homology CDS 22116 23861 . + 0 ID=cds-WP_110473351.1;Parent=gene-DDE57_RS00095;Dbxref=Genbank:WP_110473351.1;Name=WP_110473351.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024915.2;locus_tag=DDE57_RS00095;product=tetratricopeptide repeat protein;protein_id=WP_110473351.1;transl_table=11 NZ_CP029009.1 RefSeq gene 23842 24768 . + . ID=gene-DDE57_RS01490;Name=DDE57_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01490 NZ_CP029009.1 GeneMarkS-2+ CDS 23842 24768 . + 0 ID=cds-WP_204352378.1;Parent=gene-DDE57_RS01490;Dbxref=Genbank:WP_204352378.1;Name=WP_204352378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE57_RS01490;product=hypothetical protein;protein_id=WP_204352378.1;transl_table=11 NZ_CP029009.1 RefSeq gene 24776 25225 . - . ID=gene-DDE57_RS00105;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=DDE57_RS00105 NZ_CP029009.1 Protein Homology CDS 24776 25225 . - 0 ID=cds-WP_110473352.1;Parent=gene-DDE57_RS00105;Dbxref=Genbank:WP_110473352.1;Name=WP_110473352.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00158.1;locus_tag=DDE57_RS00105;product=50S ribosomal protein L9;protein_id=WP_110473352.1;transl_table=11 NZ_CP029009.1 RefSeq gene 25227 25478 . - . ID=gene-DDE57_RS00110;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=DDE57_RS00110 NZ_CP029009.1 Protein Homology CDS 25227 25478 . - 0 ID=cds-WP_239493548.1;Parent=gene-DDE57_RS00110;Dbxref=Genbank:WP_239493548.1;Name=WP_239493548.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002670530.1;locus_tag=DDE57_RS00110;product=30S ribosomal protein S18;protein_id=WP_239493548.1;transl_table=11 NZ_CP029009.1 RefSeq gene 25502 25816 . - . ID=gene-DDE57_RS01465;Name=DDE57_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01465 NZ_CP029009.1 GeneMarkS-2+ CDS 25502 25816 . - 0 ID=cds-WP_162616776.1;Parent=gene-DDE57_RS01465;Dbxref=Genbank:WP_162616776.1;Name=WP_162616776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE57_RS01465;product=hypothetical protein;protein_id=WP_162616776.1;transl_table=11 NZ_CP029009.1 RefSeq gene 25821 26180 . - . ID=gene-DDE57_RS00115;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=DDE57_RS00115 NZ_CP029009.1 Protein Homology CDS 25821 26180 . - 0 ID=cds-WP_110473353.1;Parent=gene-DDE57_RS00115;Dbxref=Genbank:WP_110473353.1;Name=WP_110473353.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799445.1;locus_tag=DDE57_RS00115;product=30S ribosomal protein S6;protein_id=WP_110473353.1;transl_table=11 NZ_CP029009.1 RefSeq gene 26196 26523 . - . ID=gene-DDE57_RS00120;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=DDE57_RS00120 NZ_CP029009.1 cmsearch tmRNA 26196 26523 . - . ID=rna-DDE57_RS00120;Parent=gene-DDE57_RS00120;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS00120;product=transfer-messenger RNA NZ_CP029009.1 cmsearch exon 26196 26523 . - . ID=exon-DDE57_RS00120-1;Parent=rna-DDE57_RS00120;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS00120;product=transfer-messenger RNA NZ_CP029009.1 RefSeq gene 26534 26788 . - . ID=gene-DDE57_RS00125;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=DDE57_RS00125 NZ_CP029009.1 Protein Homology CDS 26534 26788 . - 0 ID=cds-WP_015799444.1;Parent=gene-DDE57_RS00125;Dbxref=Genbank:WP_015799444.1;Name=WP_015799444.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743953.1;locus_tag=DDE57_RS00125;product=50S ribosomal protein L27;protein_id=WP_015799444.1;transl_table=11 NZ_CP029009.1 RefSeq gene 26791 27111 . - . ID=gene-DDE57_RS00130;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=DDE57_RS00130 NZ_CP029009.1 Protein Homology CDS 26791 27111 . - 0 ID=cds-WP_110473354.1;Parent=gene-DDE57_RS00130;Dbxref=Genbank:WP_110473354.1;Name=WP_110473354.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00061.1;locus_tag=DDE57_RS00130;product=50S ribosomal protein L21;protein_id=WP_110473354.1;transl_table=11 NZ_CP029009.1 RefSeq gene 27144 27217 . - . ID=gene-DDE57_RS00135;Name=DDE57_RS00135;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00135 NZ_CP029009.1 tRNAscan-SE tRNA 27144 27217 . - . ID=rna-DDE57_RS00135;Parent=gene-DDE57_RS00135;anticodon=(pos:complement(27181..27183));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00135;product=tRNA-Ile NZ_CP029009.1 tRNAscan-SE exon 27144 27217 . - . ID=exon-DDE57_RS00135-1;Parent=rna-DDE57_RS00135;anticodon=(pos:complement(27181..27183));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00135;product=tRNA-Ile NZ_CP029009.1 RefSeq gene 27223 27309 . - . ID=gene-DDE57_RS00140;Name=DDE57_RS00140;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00140 NZ_CP029009.1 tRNAscan-SE tRNA 27223 27309 . - . ID=rna-DDE57_RS00140;Parent=gene-DDE57_RS00140;anticodon=(pos:complement(27273..27275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00140;product=tRNA-Ser NZ_CP029009.1 tRNAscan-SE exon 27223 27309 . - . ID=exon-DDE57_RS00140-1;Parent=rna-DDE57_RS00140;anticodon=(pos:complement(27273..27275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00140;product=tRNA-Ser NZ_CP029009.1 RefSeq gene 27320 28711 . - . ID=gene-DDE57_RS00145;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=DDE57_RS00145 NZ_CP029009.1 Protein Homology CDS 27320 28711 . - 0 ID=cds-WP_110473355.1;Parent=gene-DDE57_RS00145;Dbxref=Genbank:WP_110473355.1;Name=WP_110473355.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799442.1;locus_tag=DDE57_RS00145;product=asparagine--tRNA ligase;protein_id=WP_110473355.1;transl_table=11 NZ_CP029009.1 RefSeq gene 28717 29271 . - . ID=gene-DDE57_RS00150;Name=DDE57_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00150 NZ_CP029009.1 Protein Homology CDS 28717 29271 . - 0 ID=cds-WP_162616777.1;Parent=gene-DDE57_RS00150;Dbxref=Genbank:WP_162616777.1;Name=WP_162616777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013891.2;locus_tag=DDE57_RS00150;product=ribosome-recycling factor;protein_id=WP_162616777.1;transl_table=11 NZ_CP029009.1 RefSeq gene 29402 31726 . + . ID=gene-DDE57_RS00155;Name=DDE57_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00155 NZ_CP029009.1 Protein Homology CDS 29402 31726 . + 0 ID=cds-WP_162616778.1;Parent=gene-DDE57_RS00155;Dbxref=Genbank:WP_162616778.1;Name=WP_162616778.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018899.2;locus_tag=DDE57_RS00155;product=hypothetical protein;protein_id=WP_162616778.1;transl_table=11 NZ_CP029009.1 RefSeq gene 31737 31880 . - . ID=gene-DDE57_RS01470;Name=DDE57_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01470 NZ_CP029009.1 GeneMarkS-2+ CDS 31737 31880 . - 0 ID=cds-WP_162616675.1;Parent=gene-DDE57_RS01470;Dbxref=Genbank:WP_162616675.1;Name=WP_162616675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE57_RS01470;product=hypothetical protein;protein_id=WP_162616675.1;transl_table=11 NZ_CP029009.1 RefSeq gene 31877 33442 . - . ID=gene-DDE57_RS00160;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=DDE57_RS00160 NZ_CP029009.1 Protein Homology CDS 31877 33442 . - 0 ID=cds-WP_110473358.1;Parent=gene-DDE57_RS00160;Dbxref=Genbank:WP_110473358.1;Name=WP_110473358.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: protein motif:HMM:NF013725.2;locus_tag=DDE57_RS00160;product=cytochrome c biogenesis protein CcsA;protein_id=WP_110473358.1;transl_table=11 NZ_CP029009.1 RefSeq gene 33595 34989 . - . ID=gene-DDE57_RS00165;Name=DDE57_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00165 NZ_CP029009.1 Protein Homology CDS 33595 34989 . - 0 ID=cds-WP_110473359.1;Parent=gene-DDE57_RS00165;Dbxref=Genbank:WP_110473359.1;Name=WP_110473359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016995.2;locus_tag=DDE57_RS00165;product=cytochrome c biogenesis protein ResB;protein_id=WP_110473359.1;transl_table=11 NZ_CP029009.1 RefSeq gene 35047 36021 . + . ID=gene-DDE57_RS00170;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=DDE57_RS00170 NZ_CP029009.1 Protein Homology CDS 35047 36021 . + 0 ID=cds-WP_110473360.1;Parent=gene-DDE57_RS00170;Dbxref=Genbank:WP_110473360.1;Name=WP_110473360.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799439.1;locus_tag=DDE57_RS00170;product=tryptophan--tRNA ligase;protein_id=WP_110473360.1;transl_table=11 NZ_CP029009.1 RefSeq gene 36163 36246 . + . ID=gene-DDE57_RS00175;Name=DDE57_RS00175;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00175 NZ_CP029009.1 tRNAscan-SE tRNA 36163 36246 . + . ID=rna-DDE57_RS00175;Parent=gene-DDE57_RS00175;anticodon=(pos:36197..36199);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00175;product=tRNA-Leu NZ_CP029009.1 tRNAscan-SE exon 36163 36246 . + . ID=exon-DDE57_RS00175-1;Parent=rna-DDE57_RS00175;anticodon=(pos:36197..36199);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00175;product=tRNA-Leu NZ_CP029009.1 RefSeq gene 36253 36337 . + . ID=gene-DDE57_RS00180;Name=DDE57_RS00180;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00180 NZ_CP029009.1 tRNAscan-SE tRNA 36253 36337 . + . ID=rna-DDE57_RS00180;Parent=gene-DDE57_RS00180;anticodon=(pos:36287..36289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00180;product=tRNA-Leu NZ_CP029009.1 tRNAscan-SE exon 36253 36337 . + . ID=exon-DDE57_RS00180-1;Parent=rna-DDE57_RS00180;anticodon=(pos:36287..36289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00180;product=tRNA-Leu NZ_CP029009.1 RefSeq gene 36346 36942 . + . ID=gene-DDE57_RS00185;Name=DDE57_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00185 NZ_CP029009.1 Protein Homology CDS 36346 36942 . + 0 ID=cds-WP_239493729.1;Parent=gene-DDE57_RS00185;Dbxref=Genbank:WP_239493729.1;Name=WP_239493729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038575.1;locus_tag=DDE57_RS00185;product=CPBP family glutamic-type intramembrane protease;protein_id=WP_239493729.1;transl_table=11 NZ_CP029009.1 RefSeq gene 36929 37807 . - . ID=gene-DDE57_RS00190;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=DDE57_RS00190 NZ_CP029009.1 Protein Homology CDS 36929 37807 . - 0 ID=cds-WP_110473362.1;Parent=gene-DDE57_RS00190;Dbxref=Genbank:WP_110473362.1;Name=WP_110473362.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799437.1;locus_tag=DDE57_RS00190;product=succinate--CoA ligase subunit alpha;protein_id=WP_110473362.1;transl_table=11 NZ_CP029009.1 RefSeq gene 37864 38016 . + . ID=gene-DDE57_RS00195;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=DDE57_RS00195 NZ_CP029009.1 Protein Homology CDS 37864 38016 . + 0 ID=cds-WP_015799436.1;Parent=gene-DDE57_RS00195;Dbxref=Genbank:WP_015799436.1;Name=WP_015799436.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013598444.1;locus_tag=DDE57_RS00195;product=50S ribosomal protein L34;protein_id=WP_015799436.1;transl_table=11 NZ_CP029009.1 RefSeq gene 38034 38885 . + . ID=gene-DDE57_RS00200;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=DDE57_RS00200 NZ_CP029009.1 Protein Homology CDS 38034 38885 . + 0 ID=cds-WP_110473363.1;Parent=gene-DDE57_RS00200;Dbxref=Genbank:WP_110473363.1;Name=WP_110473363.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011963587.1;locus_tag=DDE57_RS00200;product=lipoyl synthase;protein_id=WP_110473363.1;transl_table=11 NZ_CP029009.1 RefSeq gene 38886 40202 . + . ID=gene-DDE57_RS00205;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=DDE57_RS00205 NZ_CP029009.1 Protein Homology CDS 38886 40202 . + 0 ID=cds-WP_110473364.1;Parent=gene-DDE57_RS00205;Dbxref=Genbank:WP_110473364.1;Name=WP_110473364.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220952.1;locus_tag=DDE57_RS00205;product=ribosome biogenesis GTPase Der;protein_id=WP_110473364.1;transl_table=11 NZ_CP029009.1 RefSeq gene 40234 42678 . + . ID=gene-DDE57_RS00210;Name=DDE57_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00210 NZ_CP029009.1 Protein Homology CDS 40234 42678 . + 0 ID=cds-WP_110473365.1;Parent=gene-DDE57_RS00210;Dbxref=Genbank:WP_110473365.1;Name=WP_110473365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799433.1;locus_tag=DDE57_RS00210;product=heavy metal translocating P-type ATPase metal-binding domain-containing protein;protein_id=WP_110473365.1;transl_table=11 NZ_CP029009.1 RefSeq gene 42684 42878 . + . ID=gene-DDE57_RS00215;Name=ccoS;gbkey=Gene;gene=ccoS;gene_biotype=protein_coding;locus_tag=DDE57_RS00215 NZ_CP029009.1 Protein Homology CDS 42684 42878 . + 0 ID=cds-WP_239493730.1;Parent=gene-DDE57_RS00215;Dbxref=Genbank:WP_239493730.1;Name=WP_239493730.1;gbkey=CDS;gene=ccoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916726.1;locus_tag=DDE57_RS00215;product=cbb3-type cytochrome oxidase assembly protein CcoS;protein_id=WP_239493730.1;transl_table=11 NZ_CP029009.1 RefSeq gene 42802 45039 . + . ID=gene-DDE57_RS00220;Name=ccoN;gbkey=Gene;gene=ccoN;gene_biotype=protein_coding;locus_tag=DDE57_RS00220 NZ_CP029009.1 Protein Homology CDS 42802 45039 . + 0 ID=cds-WP_239493731.1;Parent=gene-DDE57_RS00220;Dbxref=Genbank:WP_239493731.1;Name=WP_239493731.1;Ontology_term=GO:0004129;gbkey=CDS;gene=ccoN;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799432.1;locus_tag=DDE57_RS00220;product=cytochrome-c oxidase%2C cbb3-type subunit I;protein_id=WP_239493731.1;transl_table=11 NZ_CP029009.1 RefSeq gene 45049 45825 . + . ID=gene-DDE57_RS00225;Name=DDE57_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00225 NZ_CP029009.1 Protein Homology CDS 45049 45825 . + 0 ID=cds-WP_110473367.1;Parent=gene-DDE57_RS00225;Dbxref=Genbank:WP_110473367.1;Name=WP_110473367.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799431.1;locus_tag=DDE57_RS00225;product=c-type cytochrome;protein_id=WP_110473367.1;transl_table=11 NZ_CP029009.1 RefSeq gene 45842 46288 . + . ID=gene-DDE57_RS00230;Name=DDE57_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00230 NZ_CP029009.1 Protein Homology CDS 45842 46288 . + 0 ID=cds-WP_110473368.1;Parent=gene-DDE57_RS00230;Dbxref=Genbank:WP_110473368.1;Name=WP_110473368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038569.1;locus_tag=DDE57_RS00230;product=FixH family protein;protein_id=WP_110473368.1;transl_table=11 NZ_CP029009.1 RefSeq gene 46276 46992 . + . ID=gene-DDE57_RS00235;Name=DDE57_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00235 NZ_CP029009.1 Protein Homology CDS 46276 46992 . + 0 ID=cds-WP_110473369.1;Parent=gene-DDE57_RS00235;Dbxref=Genbank:WP_110473369.1;Name=WP_110473369.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024778.2;locus_tag=DDE57_RS00235;product=sulfite exporter TauE/SafE family protein;protein_id=WP_110473369.1;transl_table=11 NZ_CP029009.1 RefSeq gene 47027 47109 . + . ID=gene-DDE57_RS00240;Name=DDE57_RS00240;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00240 NZ_CP029009.1 tRNAscan-SE tRNA 47027 47109 . + . ID=rna-DDE57_RS00240;Parent=gene-DDE57_RS00240;anticodon=(pos:47061..47063);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00240;product=tRNA-Ser NZ_CP029009.1 tRNAscan-SE exon 47027 47109 . + . ID=exon-DDE57_RS00240-1;Parent=rna-DDE57_RS00240;anticodon=(pos:47061..47063);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00240;product=tRNA-Ser NZ_CP029009.1 RefSeq gene 47113 47187 . + . ID=gene-DDE57_RS00245;Name=DDE57_RS00245;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00245 NZ_CP029009.1 tRNAscan-SE tRNA 47113 47187 . + . ID=rna-DDE57_RS00245;Parent=gene-DDE57_RS00245;anticodon=(pos:47148..47150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00245;product=tRNA-Pro NZ_CP029009.1 tRNAscan-SE exon 47113 47187 . + . ID=exon-DDE57_RS00245-1;Parent=rna-DDE57_RS00245;anticodon=(pos:47148..47150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00245;product=tRNA-Pro NZ_CP029009.1 RefSeq gene 47190 47262 . + . ID=gene-DDE57_RS00250;Name=DDE57_RS00250;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00250 NZ_CP029009.1 tRNAscan-SE tRNA 47190 47262 . + . ID=rna-DDE57_RS00250;Parent=gene-DDE57_RS00250;anticodon=(pos:47223..47225);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00250;product=tRNA-Arg NZ_CP029009.1 tRNAscan-SE exon 47190 47262 . + . ID=exon-DDE57_RS00250-1;Parent=rna-DDE57_RS00250;anticodon=(pos:47223..47225);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00250;product=tRNA-Arg NZ_CP029009.1 RefSeq gene 47289 49736 . + . ID=gene-DDE57_RS00255;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=DDE57_RS00255 NZ_CP029009.1 Protein Homology CDS 47289 49736 . + 0 ID=cds-WP_110473370.1;Parent=gene-DDE57_RS00255;Dbxref=Genbank:WP_110473370.1;Name=WP_110473370.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799428.1;locus_tag=DDE57_RS00255;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_110473370.1;transl_table=11 NZ_CP029009.1 RefSeq gene 49738 50673 . + . ID=gene-DDE57_RS00260;Name=DDE57_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00260 NZ_CP029009.1 Protein Homology CDS 49738 50673 . + 0 ID=cds-WP_110473371.1;Parent=gene-DDE57_RS00260;Dbxref=Genbank:WP_110473371.1;Name=WP_110473371.1;Ontology_term=GO:0006566,GO:0004413,GO:0005524;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine metabolic process|0006566||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315597.1;locus_tag=DDE57_RS00260;product=homoserine kinase;protein_id=WP_110473371.1;transl_table=11 NZ_CP029009.1 RefSeq gene 50677 51990 . + . ID=gene-DDE57_RS00265;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=DDE57_RS00265 NZ_CP029009.1 Protein Homology CDS 50677 51990 . + 0 ID=cds-WP_110473372.1;Parent=gene-DDE57_RS00265;Dbxref=Genbank:WP_110473372.1;Name=WP_110473372.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220961.1;locus_tag=DDE57_RS00265;product=threonine synthase;protein_id=WP_110473372.1;transl_table=11 NZ_CP029009.1 RefSeq gene 51985 52890 . - . ID=gene-DDE57_RS00270;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=DDE57_RS00270 NZ_CP029009.1 Protein Homology CDS 51985 52890 . - 0 ID=cds-WP_110473373.1;Parent=gene-DDE57_RS00270;Dbxref=Genbank:WP_110473373.1;Name=WP_110473373.1;Ontology_term=GO:0009234,GO:0046428;gbkey=CDS;gene=menA;go_function=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799425.1;locus_tag=DDE57_RS00270;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=WP_110473373.1;transl_table=11 NZ_CP029009.1 RefSeq gene 52890 54395 . - . ID=gene-DDE57_RS00275;Name=DDE57_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00275 NZ_CP029009.1 Protein Homology CDS 52890 54395 . - 0 ID=cds-WP_110473374.1;Parent=gene-DDE57_RS00275;Dbxref=Genbank:WP_110473374.1;Name=WP_110473374.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799424.1;locus_tag=DDE57_RS00275;product=glycine--tRNA ligase;protein_id=WP_110473374.1;transl_table=11 NZ_CP029009.1 RefSeq gene 54409 54771 . - . ID=gene-DDE57_RS00280;Name=DDE57_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00280 NZ_CP029009.1 Protein Homology CDS 54409 54771 . - 0 ID=cds-WP_110473375.1;Parent=gene-DDE57_RS00280;Dbxref=Genbank:WP_110473375.1;Name=WP_110473375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799423.1;locus_tag=DDE57_RS00280;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_110473375.1;transl_table=11 NZ_CP029009.1 RefSeq gene 54772 55119 . - . ID=gene-DDE57_RS00285;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=DDE57_RS00285 NZ_CP029009.1 Protein Homology CDS 54772 55119 . - 0 ID=cds-WP_110473376.1;Parent=gene-DDE57_RS00285;Dbxref=Genbank:WP_110473376.1;Name=WP_110473376.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315592.1;locus_tag=DDE57_RS00285;product=50S ribosomal protein L19;protein_id=WP_110473376.1;transl_table=11 NZ_CP029009.1 RefSeq gene 55177 58362 . + . ID=gene-DDE57_RS00290;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=DDE57_RS00290 NZ_CP029009.1 Protein Homology CDS 55177 58362 . + 0 ID=cds-WP_110473377.1;Parent=gene-DDE57_RS00290;Dbxref=Genbank:WP_110473377.1;Name=WP_110473377.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B in some organisms%2C there are paralogous proteins that have been found to be nonessential but do function in secretion of a subset of exported proteins;gbkey=CDS;gene=secA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799421.1;locus_tag=DDE57_RS00290;product=preprotein translocase subunit SecA;protein_id=WP_110473377.1;transl_table=11 NZ_CP029009.1 RefSeq gene 58349 59653 . + . ID=gene-DDE57_RS00295;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=DDE57_RS00295 NZ_CP029009.1 Protein Homology CDS 58349 59653 . + 0 ID=cds-WP_110473378.1;Parent=gene-DDE57_RS00295;Dbxref=Genbank:WP_110473378.1;Name=WP_110473378.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799420.1;locus_tag=DDE57_RS00295;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WP_110473378.1;transl_table=11 NZ_CP029009.1 RefSeq gene 59650 61491 . - . ID=gene-DDE57_RS00300;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=DDE57_RS00300 NZ_CP029009.1 Protein Homology CDS 59650 61491 . - 0 ID=cds-WP_110473379.1;Parent=gene-DDE57_RS00300;Dbxref=Genbank:WP_110473379.1;Name=WP_110473379.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799419.1;locus_tag=DDE57_RS00300;product=molecular chaperone HtpG;protein_id=WP_110473379.1;transl_table=11 NZ_CP029009.1 RefSeq gene 61478 62569 . - . ID=gene-DDE57_RS00305;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=DDE57_RS00305 NZ_CP029009.1 Protein Homology CDS 61478 62569 . - 0 ID=cds-WP_110473380.1;Parent=gene-DDE57_RS00305;Dbxref=Genbank:WP_110473380.1;Name=WP_110473380.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821591.1;locus_tag=DDE57_RS00305;product=chorismate synthase;protein_id=WP_110473380.1;transl_table=11 NZ_CP029009.1 RefSeq gene 62591 62676 . - . ID=gene-DDE57_RS00310;Name=DDE57_RS00310;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00310 NZ_CP029009.1 tRNAscan-SE tRNA 62591 62676 . - . ID=rna-DDE57_RS00310;Parent=gene-DDE57_RS00310;anticodon=(pos:complement(62640..62642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00310;product=tRNA-Ser NZ_CP029009.1 tRNAscan-SE exon 62591 62676 . - . ID=exon-DDE57_RS00310-1;Parent=rna-DDE57_RS00310;anticodon=(pos:complement(62640..62642));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00310;product=tRNA-Ser NZ_CP029009.1 RefSeq gene 62676 63881 . - . ID=gene-DDE57_RS00315;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=DDE57_RS00315 NZ_CP029009.1 Protein Homology CDS 62676 63881 . - 0 ID=cds-WP_110473381.1;Parent=gene-DDE57_RS00315;Dbxref=Genbank:WP_110473381.1;Name=WP_110473381.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799417.1;locus_tag=DDE57_RS00315;product=diaminopimelate decarboxylase;protein_id=WP_110473381.1;transl_table=11 NZ_CP029009.1 RefSeq gene 63901 66297 . - . ID=gene-DDE57_RS00320;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=DDE57_RS00320 NZ_CP029009.1 Protein Homology CDS 63901 66297 . - 0 ID=cds-WP_110473548.1;Parent=gene-DDE57_RS00320;Dbxref=Genbank:WP_110473548.1;Name=WP_110473548.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315586.1;locus_tag=DDE57_RS00320;product=endopeptidase La;protein_id=WP_110473548.1;transl_table=11 NZ_CP029009.1 RefSeq gene 66407 67873 . + . ID=gene-DDE57_RS00325;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=DDE57_RS00325 NZ_CP029009.1 Protein Homology CDS 66407 67873 . + 0 ID=cds-WP_110473382.1;Parent=gene-DDE57_RS00325;Dbxref=Genbank:WP_110473382.1;Name=WP_110473382.1;Ontology_term=GO:0006433,GO:0004827;gbkey=CDS;gene=proS;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784094.1;locus_tag=DDE57_RS00325;product=proline--tRNA ligase;protein_id=WP_110473382.1;transl_table=11 NZ_CP029009.1 RefSeq gene 67994 69409 . + . ID=gene-DDE57_RS00330;Name=DDE57_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00330 NZ_CP029009.1 Protein Homology CDS 67994 69409 . + 0 ID=cds-WP_110473383.1;Parent=gene-DDE57_RS00330;Dbxref=Genbank:WP_110473383.1;Name=WP_110473383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784093.1;locus_tag=DDE57_RS00330;product=anthranilate synthase component I family protein;protein_id=WP_110473383.1;transl_table=11 NZ_CP029009.1 RefSeq gene 69406 69978 . + . ID=gene-DDE57_RS00335;Name=DDE57_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00335 NZ_CP029009.1 Protein Homology CDS 69406 69978 . + 0 ID=cds-WP_110473384.1;Parent=gene-DDE57_RS00335;Dbxref=Genbank:WP_110473384.1;Name=WP_110473384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784092.1;locus_tag=DDE57_RS00335;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_110473384.1;transl_table=11 NZ_CP029009.1 RefSeq gene 69975 70961 . + . ID=gene-DDE57_RS00340;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=DDE57_RS00340 NZ_CP029009.1 Protein Homology CDS 69975 70961 . + 0 ID=cds-WP_110473549.1;Parent=gene-DDE57_RS00340;Dbxref=Genbank:WP_110473549.1;Name=WP_110473549.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784091.1;locus_tag=DDE57_RS00340;product=anthranilate phosphoribosyltransferase;protein_id=WP_110473549.1;transl_table=11 NZ_CP029009.1 RefSeq gene 70976 71785 . + . ID=gene-DDE57_RS00345;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=DDE57_RS00345 NZ_CP029009.1 Protein Homology CDS 70976 71785 . + 0 ID=cds-WP_110473385.1;Parent=gene-DDE57_RS00345;Dbxref=Genbank:WP_110473385.1;Name=WP_110473385.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784090.1;locus_tag=DDE57_RS00345;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_110473385.1;transl_table=11 NZ_CP029009.1 RefSeq gene 71745 73526 . + . ID=gene-DDE57_RS00350;Name=DDE57_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00350 NZ_CP029009.1 Protein Homology CDS 71745 73526 . + 0 ID=cds-WP_110473386.1;Parent=gene-DDE57_RS00350;Dbxref=Genbank:WP_110473386.1;Name=WP_110473386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784089.1;locus_tag=DDE57_RS00350;product=bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta;protein_id=WP_110473386.1;transl_table=11 NZ_CP029009.1 RefSeq gene 73741 74487 . + . ID=gene-DDE57_RS00355;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=DDE57_RS00355 NZ_CP029009.1 Protein Homology CDS 73741 74487 . + 0 ID=cds-WP_110473387.1;Parent=gene-DDE57_RS00355;Dbxref=Genbank:WP_110473387.1;Name=WP_110473387.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784088.1;locus_tag=DDE57_RS00355;product=tryptophan synthase subunit alpha;protein_id=WP_110473387.1;transl_table=11 NZ_CP029009.1 RefSeq gene 74470 75786 . - . ID=gene-DDE57_RS00360;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=DDE57_RS00360 NZ_CP029009.1 Protein Homology CDS 74470 75786 . - 0 ID=cds-WP_110473388.1;Parent=gene-DDE57_RS00360;Dbxref=Genbank:WP_110473388.1;Name=WP_110473388.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784087.1;locus_tag=DDE57_RS00360;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_110473388.1;transl_table=11 NZ_CP029009.1 RefSeq gene 75776 76291 . - . ID=gene-DDE57_RS00365;Name=DDE57_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00365 NZ_CP029009.1 Protein Homology CDS 75776 76291 . - 0 ID=cds-WP_110473389.1;Parent=gene-DDE57_RS00365;Dbxref=Genbank:WP_110473389.1;Name=WP_110473389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784086.1;locus_tag=DDE57_RS00365;product=shikimate kinase;protein_id=WP_110473389.1;transl_table=11 NZ_CP029009.1 RefSeq gene 76340 76412 . + . ID=gene-DDE57_RS00370;Name=DDE57_RS00370;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00370 NZ_CP029009.1 tRNAscan-SE tRNA 76340 76412 . + . ID=rna-DDE57_RS00370;Parent=gene-DDE57_RS00370;anticodon=(pos:76373..76375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00370;product=tRNA-Lys NZ_CP029009.1 tRNAscan-SE exon 76340 76412 . + . ID=exon-DDE57_RS00370-1;Parent=rna-DDE57_RS00370;anticodon=(pos:76373..76375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00370;product=tRNA-Lys NZ_CP029009.1 RefSeq gene 76430 76503 . - . ID=gene-DDE57_RS00375;Name=DDE57_RS00375;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00375 NZ_CP029009.1 tRNAscan-SE tRNA 76430 76503 . - . ID=rna-DDE57_RS00375;Parent=gene-DDE57_RS00375;anticodon=(pos:complement(76467..76469));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00375;product=tRNA-Asp NZ_CP029009.1 tRNAscan-SE exon 76430 76503 . - . ID=exon-DDE57_RS00375-1;Parent=rna-DDE57_RS00375;anticodon=(pos:complement(76467..76469));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00375;product=tRNA-Asp NZ_CP029009.1 RefSeq gene 76494 77567 . - . ID=gene-DDE57_RS00380;Name=DDE57_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00380 NZ_CP029009.1 Protein Homology CDS 76494 77567 . - 0 ID=cds-WP_110473390.1;Parent=gene-DDE57_RS00380;Dbxref=Genbank:WP_110473390.1;Name=WP_110473390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784085.1;locus_tag=DDE57_RS00380;product=M20 family metallo-hydrolase;protein_id=WP_110473390.1;transl_table=11 NZ_CP029009.1 RefSeq gene 77555 78331 . - . ID=gene-DDE57_RS00385;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=DDE57_RS00385 NZ_CP029009.1 Protein Homology CDS 77555 78331 . - 0 ID=cds-WP_110473391.1;Parent=gene-DDE57_RS00385;Dbxref=Genbank:WP_110473391.1;Name=WP_110473391.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784084.1;locus_tag=DDE57_RS00385;product=acetylglutamate kinase;protein_id=WP_110473391.1;transl_table=11 NZ_CP029009.1 RefSeq gene 78328 79266 . - . ID=gene-DDE57_RS00390;Name=DDE57_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00390 NZ_CP029009.1 Protein Homology CDS 78328 79266 . - 0 ID=cds-WP_110473550.1;Parent=gene-DDE57_RS00390;Dbxref=Genbank:WP_110473550.1;Name=WP_110473550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784083.1;locus_tag=DDE57_RS00390;product=acetylornithine carbamoyltransferase;protein_id=WP_110473550.1;transl_table=11 NZ_CP029009.1 RefSeq gene 79281 82472 . - . ID=gene-DDE57_RS00395;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=DDE57_RS00395 NZ_CP029009.1 Protein Homology CDS 79281 82472 . - 0 ID=cds-WP_110473392.1;Parent=gene-DDE57_RS00395;Dbxref=Genbank:WP_110473392.1;Name=WP_110473392.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carB;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784082.1;locus_tag=DDE57_RS00395;product=carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit;protein_id=WP_110473392.1;transl_table=11 NZ_CP029009.1 RefSeq gene 82469 83548 . - . ID=gene-DDE57_RS00400;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=DDE57_RS00400 NZ_CP029009.1 Protein Homology CDS 82469 83548 . - 0 ID=cds-WP_110473393.1;Parent=gene-DDE57_RS00400;Dbxref=Genbank:WP_110473393.1;Name=WP_110473393.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784081.1;locus_tag=DDE57_RS00400;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_110473393.1;transl_table=11 NZ_CP029009.1 RefSeq gene 83538 84683 . - . ID=gene-DDE57_RS00405;Name=DDE57_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00405 NZ_CP029009.1 Protein Homology CDS 83538 84683 . - 0 ID=cds-WP_110473394.1;Parent=gene-DDE57_RS00405;Dbxref=Genbank:WP_110473394.1;Name=WP_110473394.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315576.1;locus_tag=DDE57_RS00405;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_110473394.1;transl_table=11 NZ_CP029009.1 RefSeq gene 84693 85664 . - . ID=gene-DDE57_RS00410;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=DDE57_RS00410 NZ_CP029009.1 Protein Homology CDS 84693 85664 . - 0 ID=cds-WP_110473395.1;Parent=gene-DDE57_RS00410;Dbxref=Genbank:WP_110473395.1;Name=WP_110473395.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220983.1;locus_tag=DDE57_RS00410;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_110473395.1;transl_table=11 NZ_CP029009.1 RefSeq gene 85677 87413 . - . ID=gene-DDE57_RS00415;Name=DDE57_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00415 NZ_CP029009.1 Protein Homology CDS 85677 87413 . - 0 ID=cds-WP_110473396.1;Parent=gene-DDE57_RS00415;Dbxref=Genbank:WP_110473396.1;Name=WP_110473396.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821478.1;locus_tag=DDE57_RS00415;product=argininosuccinate synthase;protein_id=WP_110473396.1;transl_table=11 NZ_CP029009.1 RefSeq gene 87436 91644 . - . ID=gene-DDE57_RS00420;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=DDE57_RS00420 NZ_CP029009.1 Protein Homology CDS 87436 91644 . - 0 ID=cds-WP_110473397.1;Parent=gene-DDE57_RS00420;Dbxref=Genbank:WP_110473397.1;Name=WP_110473397.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784077.1;locus_tag=DDE57_RS00420;product=DNA polymerase III subunit alpha;protein_id=WP_110473397.1;transl_table=11 NZ_CP029009.1 RefSeq gene 91684 91758 . - . ID=gene-DDE57_RS00425;Name=DDE57_RS00425;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00425 NZ_CP029009.1 tRNAscan-SE tRNA 91684 91758 . - . ID=rna-DDE57_RS00425;Parent=gene-DDE57_RS00425;anticodon=(pos:complement(91721..91723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00425;product=tRNA-Val NZ_CP029009.1 tRNAscan-SE exon 91684 91758 . - . ID=exon-DDE57_RS00425-1;Parent=rna-DDE57_RS00425;anticodon=(pos:complement(91721..91723));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00425;product=tRNA-Val NZ_CP029009.1 RefSeq gene 91773 93149 . - . ID=gene-DDE57_RS00430;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=DDE57_RS00430 NZ_CP029009.1 Protein Homology CDS 91773 93149 . - 0 ID=cds-WP_110473398.1;Parent=gene-DDE57_RS00430;Dbxref=Genbank:WP_110473398.1;Name=WP_110473398.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220986.1;locus_tag=DDE57_RS00430;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_110473398.1;transl_table=11 NZ_CP029009.1 RefSeq gene 93154 94344 . - . ID=gene-DDE57_RS00435;Name=DDE57_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00435 NZ_CP029009.1 Protein Homology CDS 93154 94344 . - 0 ID=cds-WP_110473399.1;Parent=gene-DDE57_RS00435;Dbxref=Genbank:WP_110473399.1;Name=WP_110473399.1;Ontology_term=GO:0006083,GO:0006113,GO:0008776,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acetate kinase activity|0008776||IEA;go_process=acetate metabolic process|0006083||IEA,fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013997559.1;locus_tag=DDE57_RS00435;product=acetate/propionate family kinase;protein_id=WP_110473399.1;transl_table=11 NZ_CP029009.1 RefSeq gene 94341 95339 . - . ID=gene-DDE57_RS00440;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=DDE57_RS00440 NZ_CP029009.1 Protein Homology CDS 94341 95339 . - 0 ID=cds-WP_110473400.1;Parent=gene-DDE57_RS00440;Dbxref=Genbank:WP_110473400.1;Name=WP_110473400.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784074.1;locus_tag=DDE57_RS00440;product=phosphate acetyltransferase;protein_id=WP_110473400.1;transl_table=11 NZ_CP029009.1 RefSeq gene 95366 95746 . + . ID=gene-DDE57_RS00445;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=DDE57_RS00445 NZ_CP029009.1 Protein Homology CDS 95366 95746 . + 0 ID=cds-WP_110473401.1;Parent=gene-DDE57_RS00445;Dbxref=Genbank:WP_110473401.1;Name=WP_110473401.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:TIGR00082.1;locus_tag=DDE57_RS00445;product=30S ribosome-binding factor RbfA;protein_id=WP_110473401.1;transl_table=11 NZ_CP029009.1 RefSeq gene 95748 96722 . - . ID=gene-DDE57_RS00450;Name=DDE57_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00450 NZ_CP029009.1 Protein Homology CDS 95748 96722 . - 0 ID=cds-WP_110473402.1;Parent=gene-DDE57_RS00450;Dbxref=Genbank:WP_110473402.1;Name=WP_110473402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784072.1;locus_tag=DDE57_RS00450;product=M42 family peptidase;protein_id=WP_110473402.1;transl_table=11 NZ_CP029009.1 RefSeq gene 96733 98079 . - . ID=gene-DDE57_RS00455;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=DDE57_RS00455 NZ_CP029009.1 Protein Homology CDS 96733 98079 . - 0 ID=cds-WP_110473403.1;Parent=gene-DDE57_RS00455;Dbxref=Genbank:WP_110473403.1;Name=WP_110473403.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=dnaB;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784071.1;locus_tag=DDE57_RS00455;product=replicative DNA helicase;protein_id=WP_110473403.1;transl_table=11 NZ_CP029009.1 RefSeq gene 98083 99486 . - . ID=gene-DDE57_RS00460;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=DDE57_RS00460 NZ_CP029009.1 Protein Homology CDS 98083 99486 . - 0 ID=cds-WP_110473404.1;Parent=gene-DDE57_RS00460;Dbxref=Genbank:WP_110473404.1;Name=WP_110473404.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220989.1;locus_tag=DDE57_RS00460;product=dihydrolipoyl dehydrogenase;protein_id=WP_110473404.1;transl_table=11 NZ_CP029009.1 RefSeq gene 99515 100519 . - . ID=gene-DDE57_RS00465;Name=DDE57_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00465 NZ_CP029009.1 Protein Homology CDS 99515 100519 . - 0 ID=cds-WP_110473405.1;Parent=gene-DDE57_RS00465;Dbxref=Genbank:WP_110473405.1;Name=WP_110473405.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DDE57_RS00465;product=HDIG domain-containing protein;protein_id=WP_110473405.1;transl_table=11 NZ_CP029009.1 RefSeq gene 100784 100936 . + . ID=gene-DDE57_RS01475;Name=DDE57_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01475 NZ_CP029009.1 GeneMarkS-2+ CDS 100784 100936 . + 0 ID=cds-WP_162616779.1;Parent=gene-DDE57_RS01475;Dbxref=Genbank:WP_162616779.1;Name=WP_162616779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE57_RS01475;product=hypothetical protein;protein_id=WP_162616779.1;transl_table=11 NZ_CP029009.1 RefSeq gene 100965 102065 . + . ID=gene-DDE57_RS00470;Name=DDE57_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00470 NZ_CP029009.1 Protein Homology CDS 100965 102065 . + 0 ID=cds-WP_110473406.1;Parent=gene-DDE57_RS00470;Dbxref=Genbank:WP_110473406.1;Name=WP_110473406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784068.1;locus_tag=DDE57_RS00470;product=DnaJ domain-containing protein;protein_id=WP_110473406.1;transl_table=11 NZ_CP029009.1 RefSeq gene 102062 103162 . + . ID=gene-DDE57_RS00475;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=DDE57_RS00475 NZ_CP029009.1 Protein Homology CDS 102062 103162 . + 0 ID=cds-WP_110473407.1;Parent=gene-DDE57_RS00475;Dbxref=Genbank:WP_110473407.1;Name=WP_110473407.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014246445.1;locus_tag=DDE57_RS00475;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_110473407.1;transl_table=11 NZ_CP029009.1 RefSeq gene 103210 104100 . + . ID=gene-DDE57_RS00480;Name=DDE57_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00480 NZ_CP029009.1 Protein Homology CDS 103210 104100 . + 0 ID=cds-WP_110473408.1;Parent=gene-DDE57_RS00480;Dbxref=Genbank:WP_110473408.1;Name=WP_110473408.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.2;locus_tag=DDE57_RS00480;product=HD domain-containing protein;protein_id=WP_110473408.1;transl_table=11 NZ_CP029009.1 RefSeq gene 104240 105292 . - . ID=gene-DDE57_RS00485;Name=DDE57_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00485 NZ_CP029009.1 Protein Homology CDS 104240 105292 . - 0 ID=cds-WP_110473409.1;Parent=gene-DDE57_RS00485;Dbxref=Genbank:WP_110473409.1;Name=WP_110473409.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784065.1;locus_tag=DDE57_RS00485;product=branched-chain amino acid aminotransferase;protein_id=WP_110473409.1;transl_table=11 NZ_CP029009.1 RefSeq gene 105382 106206 . - . ID=gene-DDE57_RS00490;Name=DDE57_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00490 NZ_CP029009.1 Protein Homology CDS 105382 106206 . - 0 ID=cds-WP_110473410.1;Parent=gene-DDE57_RS00490;Dbxref=Genbank:WP_110473410.1;Name=WP_110473410.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784064.1;locus_tag=DDE57_RS00490;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_110473410.1;transl_table=11 NZ_CP029009.1 RefSeq gene 106317 106748 . + . ID=gene-DDE57_RS00495;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=DDE57_RS00495 NZ_CP029009.1 Protein Homology CDS 106317 106748 . + 0 ID=cds-WP_110473411.1;Parent=gene-DDE57_RS00495;Dbxref=Genbank:WP_110473411.1;Name=WP_110473411.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784063.1;locus_tag=DDE57_RS00495;product=Holliday junction resolvase RuvX;protein_id=WP_110473411.1;transl_table=11 NZ_CP029009.1 RefSeq gene 106766 107308 . + . ID=gene-DDE57_RS00500;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=DDE57_RS00500 NZ_CP029009.1 Protein Homology CDS 106766 107308 . + 0 ID=cds-WP_110473412.1;Parent=gene-DDE57_RS00500;Dbxref=Genbank:WP_110473412.1;Name=WP_110473412.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784062.1;locus_tag=DDE57_RS00500;product=peptide deformylase;protein_id=WP_110473412.1;transl_table=11 NZ_CP029009.1 RefSeq gene 107280 107615 . - . ID=gene-DDE57_RS00505;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=DDE57_RS00505 NZ_CP029009.1 Protein Homology CDS 107280 107615 . - 0 ID=cds-WP_110473413.1;Parent=gene-DDE57_RS00505;Dbxref=Genbank:WP_110473413.1;Name=WP_110473413.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784061.1;locus_tag=DDE57_RS00505;product=50S ribosomal protein L20;protein_id=WP_110473413.1;transl_table=11 NZ_CP029009.1 RefSeq gene 107608 107823 . - . ID=gene-DDE57_RS00510;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=DDE57_RS00510 NZ_CP029009.1 Protein Homology CDS 107608 107823 . - 0 ID=cds-WP_110473414.1;Parent=gene-DDE57_RS00510;Dbxref=Genbank:WP_110473414.1;Name=WP_110473414.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784060.1;locus_tag=DDE57_RS00510;product=50S ribosomal protein L35;protein_id=WP_110473414.1;transl_table=11 NZ_CP029009.1 RefSeq gene 107829 108350 . - . ID=gene-DDE57_RS00515;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=DDE57_RS00515 NZ_CP029009.1 Protein Homology CDS 107829 108350 . - 0 ID=cds-WP_110473415.1;Parent=gene-DDE57_RS00515;Dbxref=Genbank:WP_110473415.1;Name=WP_110473415.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784059.1;locus_tag=DDE57_RS00515;product=translation initiation factor IF-3;protein_id=WP_110473415.1;transl_table=11 NZ_CP029009.1 RefSeq gene 108420 110345 . - . ID=gene-DDE57_RS00520;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=DDE57_RS00520 NZ_CP029009.1 Protein Homology CDS 108420 110345 . - 0 ID=cds-WP_110473416.1;Parent=gene-DDE57_RS00520;Dbxref=Genbank:WP_110473416.1;Name=WP_110473416.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014158849.1;locus_tag=DDE57_RS00520;product=molecular chaperone DnaK;protein_id=WP_110473416.1;transl_table=11 NZ_CP029009.1 RefSeq gene 110688 111143 . + . ID=gene-DDE57_RS00530;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=DDE57_RS00530 NZ_CP029009.1 Protein Homology CDS 110688 111143 . + 0 ID=cds-WP_110473417.1;Parent=gene-DDE57_RS00530;Dbxref=Genbank:WP_110473417.1;Name=WP_110473417.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784057.1;locus_tag=DDE57_RS00530;product=50S ribosomal protein L13;protein_id=WP_110473417.1;transl_table=11 NZ_CP029009.1 RefSeq gene 111146 111535 . + . ID=gene-DDE57_RS00535;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=DDE57_RS00535 NZ_CP029009.1 Protein Homology CDS 111146 111535 . + 0 ID=cds-WP_110473418.1;Parent=gene-DDE57_RS00535;Dbxref=Genbank:WP_110473418.1;Name=WP_110473418.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315550.1;locus_tag=DDE57_RS00535;product=30S ribosomal protein S9;protein_id=WP_110473418.1;transl_table=11 NZ_CP029009.1 RefSeq gene 111540 112259 . + . ID=gene-DDE57_RS00540;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=DDE57_RS00540 NZ_CP029009.1 Protein Homology CDS 111540 112259 . + 0 ID=cds-WP_110473552.1;Parent=gene-DDE57_RS00540;Dbxref=Genbank:WP_110473552.1;Name=WP_110473552.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784055.1;locus_tag=DDE57_RS00540;product=30S ribosomal protein S2;protein_id=WP_110473552.1;transl_table=11 NZ_CP029009.1 RefSeq gene 112246 113061 . + . ID=gene-DDE57_RS00545;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=DDE57_RS00545 NZ_CP029009.1 Protein Homology CDS 112246 113061 . + 0 ID=cds-WP_110473553.1;Parent=gene-DDE57_RS00545;Dbxref=Genbank:WP_110473553.1;Name=WP_110473553.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315548.1;locus_tag=DDE57_RS00545;product=translation elongation factor Ts;protein_id=WP_110473553.1;transl_table=11 NZ_CP029009.1 RefSeq gene 113062 113148 . - . ID=gene-DDE57_RS00550;Name=DDE57_RS00550;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00550 NZ_CP029009.1 tRNAscan-SE tRNA 113062 113148 . - . ID=rna-DDE57_RS00550;Parent=gene-DDE57_RS00550;anticodon=(pos:complement(113112..113114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00550;product=tRNA-Leu NZ_CP029009.1 tRNAscan-SE exon 113062 113148 . - . ID=exon-DDE57_RS00550-1;Parent=rna-DDE57_RS00550;anticodon=(pos:complement(113112..113114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00550;product=tRNA-Leu NZ_CP029009.1 RefSeq gene 113181 113253 . - . ID=gene-DDE57_RS00555;Name=DDE57_RS00555;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00555 NZ_CP029009.1 tRNAscan-SE tRNA 113181 113253 . - . ID=rna-DDE57_RS00555;Parent=gene-DDE57_RS00555;anticodon=(pos:complement(113218..113220));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00555;product=tRNA-Gly NZ_CP029009.1 tRNAscan-SE exon 113181 113253 . - . ID=exon-DDE57_RS00555-1;Parent=rna-DDE57_RS00555;anticodon=(pos:complement(113218..113220));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00555;product=tRNA-Gly NZ_CP029009.1 RefSeq pseudogene 113257 115854 . - . ID=gene-DDE57_RS00560;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=pseudogene;locus_tag=DDE57_RS00560;pseudo=true NZ_CP029009.1 Protein Homology CDS 113257 115854 . - 0 ID=cds-DDE57_RS00560;Parent=gene-DDE57_RS00560;Note=internal stop;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784053.1;locus_tag=DDE57_RS00560;product=DNA mismatch repair protein MutS;pseudo=true;transl_table=11 NZ_CP029009.1 RefSeq gene 116405 116581 . + . ID=gene-DDE57_RS00570;Name=DDE57_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00570 NZ_CP029009.1 Protein Homology CDS 116405 116581 . + 0 ID=cds-WP_110473420.1;Parent=gene-DDE57_RS00570;Dbxref=Genbank:WP_110473420.1;Name=WP_110473420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784052.1;locus_tag=DDE57_RS00570;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_110473420.1;transl_table=11 NZ_CP029009.1 RefSeq gene 116570 117613 . - . ID=gene-DDE57_RS00575;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=DDE57_RS00575 NZ_CP029009.1 Protein Homology CDS 116570 117613 . - 0 ID=cds-WP_110473421.1;Parent=gene-DDE57_RS00575;Dbxref=Genbank:WP_110473421.1;Name=WP_110473421.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784051.1;locus_tag=DDE57_RS00575;product=DNA polymerase III subunit gamma/tau;protein_id=WP_110473421.1;transl_table=11 NZ_CP029009.1 RefSeq gene 117625 118794 . - . ID=gene-DDE57_RS00580;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=DDE57_RS00580 NZ_CP029009.1 Protein Homology CDS 117625 118794 . - 0 ID=cds-WP_110473422.1;Parent=gene-DDE57_RS00580;Dbxref=Genbank:WP_110473422.1;Name=WP_110473422.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012841106.1;locus_tag=DDE57_RS00580;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_110473422.1;transl_table=11 NZ_CP029009.1 RefSeq gene 118838 118947 . - . ID=gene-DDE57_RS00585;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=DDE57_RS00585 NZ_CP029009.1 cmsearch rRNA 118838 118947 . - . ID=rna-DDE57_RS00585;Parent=gene-DDE57_RS00585;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS00585;product=5S ribosomal RNA NZ_CP029009.1 cmsearch exon 118838 118947 . - . ID=exon-DDE57_RS00585-1;Parent=rna-DDE57_RS00585;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS00585;product=5S ribosomal RNA NZ_CP029009.1 RefSeq gene 119013 121974 . - . ID=gene-DDE57_RS00590;Name=DDE57_RS00590;gbkey=Gene;gene_biotype=rRNA;locus_tag=DDE57_RS00590 NZ_CP029009.1 cmsearch rRNA 119013 121974 . - . ID=rna-DDE57_RS00590;Parent=gene-DDE57_RS00590;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS00590;product=23S ribosomal RNA NZ_CP029009.1 cmsearch exon 119013 121974 . - . ID=exon-DDE57_RS00590-1;Parent=rna-DDE57_RS00590;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS00590;product=23S ribosomal RNA NZ_CP029009.1 RefSeq gene 122126 122199 . - . ID=gene-DDE57_RS00595;Name=DDE57_RS00595;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00595 NZ_CP029009.1 tRNAscan-SE tRNA 122126 122199 . - . ID=rna-DDE57_RS00595;Parent=gene-DDE57_RS00595;anticodon=(pos:complement(122163..122165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00595;product=tRNA-Ala NZ_CP029009.1 tRNAscan-SE exon 122126 122199 . - . ID=exon-DDE57_RS00595-1;Parent=rna-DDE57_RS00595;anticodon=(pos:complement(122163..122165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00595;product=tRNA-Ala NZ_CP029009.1 RefSeq gene 122215 122288 . - . ID=gene-DDE57_RS00600;Name=DDE57_RS00600;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00600 NZ_CP029009.1 tRNAscan-SE tRNA 122215 122288 . - . ID=rna-DDE57_RS00600;Parent=gene-DDE57_RS00600;anticodon=(pos:complement(122252..122254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00600;product=tRNA-Ile NZ_CP029009.1 tRNAscan-SE exon 122215 122288 . - . ID=exon-DDE57_RS00600-1;Parent=rna-DDE57_RS00600;anticodon=(pos:complement(122252..122254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00600;product=tRNA-Ile NZ_CP029009.1 RefSeq gene 122387 123928 . - . ID=gene-DDE57_RS00605;Name=DDE57_RS00605;gbkey=Gene;gene_biotype=rRNA;locus_tag=DDE57_RS00605 NZ_CP029009.1 cmsearch rRNA 122387 123928 . - . ID=rna-DDE57_RS00605;Parent=gene-DDE57_RS00605;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS00605;product=16S ribosomal RNA NZ_CP029009.1 cmsearch exon 122387 123928 . - . ID=exon-DDE57_RS00605-1;Parent=rna-DDE57_RS00605;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS00605;product=16S ribosomal RNA NZ_CP029009.1 RefSeq gene 124147 125094 . + . ID=gene-DDE57_RS00610;Name=DDE57_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00610 NZ_CP029009.1 Protein Homology CDS 124147 125094 . + 0 ID=cds-WP_110473423.1;Parent=gene-DDE57_RS00610;Dbxref=Genbank:WP_110473423.1;Name=WP_110473423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784049.1;locus_tag=DDE57_RS00610;product=polyprenyl synthetase family protein;protein_id=WP_110473423.1;transl_table=11 NZ_CP029009.1 RefSeq gene 125099 125515 . + . ID=gene-DDE57_RS00615;Name=DDE57_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00615 NZ_CP029009.1 Protein Homology CDS 125099 125515 . + 0 ID=cds-WP_110473424.1;Parent=gene-DDE57_RS00615;Dbxref=Genbank:WP_110473424.1;Name=WP_110473424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784048.1;locus_tag=DDE57_RS00615;product=SufE family protein;protein_id=WP_110473424.1;transl_table=11 NZ_CP029009.1 RefSeq gene 125521 126666 . - . ID=gene-DDE57_RS00620;Name=DDE57_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00620 NZ_CP029009.1 Protein Homology CDS 125521 126666 . - 0 ID=cds-WP_110473425.1;Parent=gene-DDE57_RS00620;Dbxref=Genbank:WP_110473425.1;Name=WP_110473425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784047.1;locus_tag=DDE57_RS00620;product=hypothetical protein;protein_id=WP_110473425.1;transl_table=11 NZ_CP029009.1 RefSeq gene 126668 127255 . - . ID=gene-DDE57_RS00625;Name=DDE57_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00625 NZ_CP029009.1 Protein Homology CDS 126668 127255 . - 0 ID=cds-WP_110473426.1;Parent=gene-DDE57_RS00625;Dbxref=Genbank:WP_110473426.1;Name=WP_110473426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784046.1;locus_tag=DDE57_RS00625;product=cytochrome c;protein_id=WP_110473426.1;transl_table=11 NZ_CP029009.1 RefSeq gene 127248 127784 . - . ID=gene-DDE57_RS00630;Name=DDE57_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00630 NZ_CP029009.1 Protein Homology CDS 127248 127784 . - 0 ID=cds-WP_110473427.1;Parent=gene-DDE57_RS00630;Dbxref=Genbank:WP_110473427.1;Name=WP_110473427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784045.1;locus_tag=DDE57_RS00630;product=DUF3341 domain-containing protein;protein_id=WP_110473427.1;transl_table=11 NZ_CP029009.1 RefSeq gene 127792 129120 . - . ID=gene-DDE57_RS00635;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=DDE57_RS00635 NZ_CP029009.1 Protein Homology CDS 127792 129120 . - 0 ID=cds-WP_110473428.1;Parent=gene-DDE57_RS00635;Dbxref=Genbank:WP_110473428.1;Name=WP_110473428.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784044.1;locus_tag=DDE57_RS00635;product=polysulfide reductase NrfD;protein_id=WP_110473428.1;transl_table=11 NZ_CP029009.1 RefSeq gene 129133 132096 . - . ID=gene-DDE57_RS00640;Name=DDE57_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00640 NZ_CP029009.1 Protein Homology CDS 129133 132096 . - 0 ID=cds-WP_110473429.1;Parent=gene-DDE57_RS00640;Dbxref=Genbank:WP_110473429.1;Name=WP_110473429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784043.1;locus_tag=DDE57_RS00640;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_110473429.1;transl_table=11 NZ_CP029009.1 RefSeq gene 132167 133480 . - . ID=gene-DDE57_RS00645;Name=DDE57_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00645 NZ_CP029009.1 Protein Homology CDS 132167 133480 . - 0 ID=cds-WP_110473430.1;Parent=gene-DDE57_RS00645;Dbxref=Genbank:WP_110473430.1;Name=WP_110473430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784042.1;locus_tag=DDE57_RS00645;product=c-type cytochrome;protein_id=WP_110473430.1;transl_table=11 NZ_CP029009.1 RefSeq gene 133589 133662 . + . ID=gene-DDE57_RS00650;Name=DDE57_RS00650;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00650 NZ_CP029009.1 tRNAscan-SE tRNA 133589 133662 . + . ID=rna-DDE57_RS00650;Parent=gene-DDE57_RS00650;anticodon=(pos:133623..133625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00650;product=tRNA-Thr NZ_CP029009.1 tRNAscan-SE exon 133589 133662 . + . ID=exon-DDE57_RS00650-1;Parent=rna-DDE57_RS00650;anticodon=(pos:133623..133625);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00650;product=tRNA-Thr NZ_CP029009.1 RefSeq gene 133682 133764 . + . ID=gene-DDE57_RS00655;Name=DDE57_RS00655;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00655 NZ_CP029009.1 tRNAscan-SE tRNA 133682 133764 . + . ID=rna-DDE57_RS00655;Parent=gene-DDE57_RS00655;anticodon=(pos:133716..133718);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00655;product=tRNA-Tyr NZ_CP029009.1 tRNAscan-SE exon 133682 133764 . + . ID=exon-DDE57_RS00655-1;Parent=rna-DDE57_RS00655;anticodon=(pos:133716..133718);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00655;product=tRNA-Tyr NZ_CP029009.1 RefSeq gene 133769 133841 . + . ID=gene-DDE57_RS00660;Name=DDE57_RS00660;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00660 NZ_CP029009.1 tRNAscan-SE tRNA 133769 133841 . + . ID=rna-DDE57_RS00660;Parent=gene-DDE57_RS00660;anticodon=(pos:133802..133804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00660;product=tRNA-Gly NZ_CP029009.1 tRNAscan-SE exon 133769 133841 . + . ID=exon-DDE57_RS00660-1;Parent=rna-DDE57_RS00660;anticodon=(pos:133802..133804);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00660;product=tRNA-Gly NZ_CP029009.1 RefSeq gene 133857 133929 . + . ID=gene-DDE57_RS00665;Name=DDE57_RS00665;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00665 NZ_CP029009.1 tRNAscan-SE tRNA 133857 133929 . + . ID=rna-DDE57_RS00665;Parent=gene-DDE57_RS00665;anticodon=(pos:133890..133892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00665;product=tRNA-Thr NZ_CP029009.1 tRNAscan-SE exon 133857 133929 . + . ID=exon-DDE57_RS00665-1;Parent=rna-DDE57_RS00665;anticodon=(pos:133890..133892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00665;product=tRNA-Thr NZ_CP029009.1 RefSeq gene 133958 135145 . + . ID=gene-DDE57_RS00670;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=DDE57_RS00670 NZ_CP029009.1 Protein Homology CDS 133958 135145 . + 0 ID=cds-WP_012784041.1;Parent=gene-DDE57_RS00670;Dbxref=Genbank:WP_012784041.1;Name=WP_012784041.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743802.1;locus_tag=DDE57_RS00670;product=elongation factor Tu;protein_id=WP_012784041.1;transl_table=11 NZ_CP029009.1 RefSeq gene 135165 135238 . + . ID=gene-DDE57_RS00675;Name=DDE57_RS00675;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00675 NZ_CP029009.1 tRNAscan-SE tRNA 135165 135238 . + . ID=rna-DDE57_RS00675;Parent=gene-DDE57_RS00675;anticodon=(pos:135199..135201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00675;product=tRNA-Trp NZ_CP029009.1 tRNAscan-SE exon 135165 135238 . + . ID=exon-DDE57_RS00675-1;Parent=rna-DDE57_RS00675;anticodon=(pos:135199..135201);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00675;product=tRNA-Trp NZ_CP029009.1 RefSeq gene 135258 135488 . + . ID=gene-DDE57_RS00680;Name=DDE57_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00680 NZ_CP029009.1 GeneMarkS-2+ CDS 135258 135488 . + 0 ID=cds-WP_110473431.1;Parent=gene-DDE57_RS00680;Dbxref=Genbank:WP_110473431.1;Name=WP_110473431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE57_RS00680;product=hypothetical protein;protein_id=WP_110473431.1;transl_table=11 NZ_CP029009.1 RefSeq gene 135519 135941 . + . ID=gene-DDE57_RS00685;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=DDE57_RS00685 NZ_CP029009.1 Protein Homology CDS 135519 135941 . + 0 ID=cds-WP_110473432.1;Parent=gene-DDE57_RS00685;Dbxref=Genbank:WP_110473432.1;Name=WP_110473432.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315532.1;locus_tag=DDE57_RS00685;product=50S ribosomal protein L11;protein_id=WP_110473432.1;transl_table=11 NZ_CP029009.1 RefSeq gene 135968 136648 . + . ID=gene-DDE57_RS00690;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=DDE57_RS00690 NZ_CP029009.1 Protein Homology CDS 135968 136648 . + 0 ID=cds-WP_012784039.1;Parent=gene-DDE57_RS00690;Dbxref=Genbank:WP_012784039.1;Name=WP_012784039.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002673670.1;locus_tag=DDE57_RS00690;product=50S ribosomal protein L1;protein_id=WP_012784039.1;transl_table=11 NZ_CP029009.1 RefSeq gene 136670 137185 . + . ID=gene-DDE57_RS00695;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=DDE57_RS00695 NZ_CP029009.1 Protein Homology CDS 136670 137185 . + 0 ID=cds-WP_110473433.1;Parent=gene-DDE57_RS00695;Dbxref=Genbank:WP_110473433.1;Name=WP_110473433.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784038.1;locus_tag=DDE57_RS00695;product=50S ribosomal protein L10;protein_id=WP_110473433.1;transl_table=11 NZ_CP029009.1 RefSeq gene 137205 137579 . + . ID=gene-DDE57_RS00700;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=DDE57_RS00700 NZ_CP029009.1 Protein Homology CDS 137205 137579 . + 0 ID=cds-WP_110473555.1;Parent=gene-DDE57_RS00700;Dbxref=Genbank:WP_110473555.1;Name=WP_110473555.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315529.1;locus_tag=DDE57_RS00700;product=50S ribosomal protein L7/L12;protein_id=WP_110473555.1;transl_table=11 NZ_CP029009.1 RefSeq gene 137591 141481 . + . ID=gene-DDE57_RS00705;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=DDE57_RS00705 NZ_CP029009.1 Protein Homology CDS 137591 141481 . + 0 ID=cds-WP_239493725.1;Parent=gene-DDE57_RS00705;Dbxref=Genbank:WP_239493725.1;Name=WP_239493725.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784036.1;locus_tag=DDE57_RS00705;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_239493725.1;transl_table=11 NZ_CP029009.1 RefSeq gene 141735 146069 . + . ID=gene-DDE57_RS00715;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=DDE57_RS00715 NZ_CP029009.1 Protein Homology CDS 141735 146069 . + 0 ID=cds-WP_110473556.1;Parent=gene-DDE57_RS00715;Dbxref=Genbank:WP_110473556.1;Name=WP_110473556.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784035.1;locus_tag=DDE57_RS00715;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_110473556.1;transl_table=11 NZ_CP029009.1 RefSeq gene 146066 146818 . - . ID=gene-DDE57_RS00720;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=DDE57_RS00720 NZ_CP029009.1 Protein Homology CDS 146066 146818 . - 0 ID=cds-WP_110473435.1;Parent=gene-DDE57_RS00720;Dbxref=Genbank:WP_110473435.1;Name=WP_110473435.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038507.1;locus_tag=DDE57_RS00720;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_110473435.1;transl_table=11 NZ_CP029009.1 RefSeq gene 146907 147833 . + . ID=gene-DDE57_RS00725;Name=DDE57_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00725 NZ_CP029009.1 Protein Homology CDS 146907 147833 . + 0 ID=cds-WP_239493593.1;Parent=gene-DDE57_RS00725;Dbxref=Genbank:WP_239493593.1;Name=WP_239493593.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00005.1;locus_tag=DDE57_RS00725;product=RluA family pseudouridine synthase;protein_id=WP_239493593.1;transl_table=11 NZ_CP029009.1 RefSeq gene 147843 147916 . + . ID=gene-DDE57_RS00730;Name=DDE57_RS00730;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00730 NZ_CP029009.1 tRNAscan-SE tRNA 147843 147916 . + . ID=rna-DDE57_RS00730;Parent=gene-DDE57_RS00730;anticodon=(pos:147877..147879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00730;product=tRNA-His NZ_CP029009.1 tRNAscan-SE exon 147843 147916 . + . ID=exon-DDE57_RS00730-1;Parent=rna-DDE57_RS00730;anticodon=(pos:147877..147879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00730;product=tRNA-His NZ_CP029009.1 RefSeq gene 147898 148074 . - . ID=gene-DDE57_RS01495;Name=DDE57_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01495 NZ_CP029009.1 Protein Homology CDS 147898 148074 . - 0 ID=cds-WP_204352373.1;Parent=gene-DDE57_RS01495;Dbxref=Genbank:WP_204352373.1;Name=WP_204352373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315525.1;locus_tag=DDE57_RS01495;product=hypothetical protein;protein_id=WP_204352373.1;transl_table=11 NZ_CP029009.1 RefSeq gene 148076 148258 . - . ID=gene-DDE57_RS00735;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=DDE57_RS00735 NZ_CP029009.1 Protein Homology CDS 148076 148258 . - 0 ID=cds-WP_012784032.1;Parent=gene-DDE57_RS00735;Dbxref=Genbank:WP_012784032.1;Name=WP_012784032.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011963553.1;locus_tag=DDE57_RS00735;product=50S ribosomal protein L33;protein_id=WP_012784032.1;transl_table=11 NZ_CP029009.1 RefSeq gene 148228 148467 . - . ID=gene-DDE57_RS00740;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=DDE57_RS00740 NZ_CP029009.1 Protein Homology CDS 148228 148467 . - 0 ID=cds-WP_110473437.1;Parent=gene-DDE57_RS00740;Dbxref=Genbank:WP_110473437.1;Name=WP_110473437.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012221019.1;locus_tag=DDE57_RS00740;product=50S ribosomal protein L28;protein_id=WP_110473437.1;transl_table=11 NZ_CP029009.1 RefSeq gene 148446 149726 . - . ID=gene-DDE57_RS00745;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=DDE57_RS00745 NZ_CP029009.1 Protein Homology CDS 148446 149726 . - 0 ID=cds-WP_110473438.1;Parent=gene-DDE57_RS00745;Dbxref=Genbank:WP_110473438.1;Name=WP_110473438.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784030.1;locus_tag=DDE57_RS00745;product=serine--tRNA ligase;protein_id=WP_110473438.1;transl_table=11 NZ_CP029009.1 RefSeq gene 149750 149821 . - . ID=gene-DDE57_RS00750;Name=DDE57_RS00750;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00750 NZ_CP029009.1 tRNAscan-SE tRNA 149750 149821 . - . ID=rna-DDE57_RS00750;Parent=gene-DDE57_RS00750;anticodon=(pos:complement(149786..149788));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00750;product=tRNA-Phe NZ_CP029009.1 tRNAscan-SE exon 149750 149821 . - . ID=exon-DDE57_RS00750-1;Parent=rna-DDE57_RS00750;anticodon=(pos:complement(149786..149788));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00750;product=tRNA-Phe NZ_CP029009.1 RefSeq gene 149833 150801 . - . ID=gene-DDE57_RS00755;Name=DDE57_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00755 NZ_CP029009.1 Protein Homology CDS 149833 150801 . - 0 ID=cds-WP_110473439.1;Parent=gene-DDE57_RS00755;Dbxref=Genbank:WP_110473439.1;Name=WP_110473439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370771.1;locus_tag=DDE57_RS00755;product=transketolase family protein;protein_id=WP_110473439.1;transl_table=11 NZ_CP029009.1 RefSeq gene 150808 151659 . - . ID=gene-DDE57_RS00760;Name=DDE57_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00760 NZ_CP029009.1 Protein Homology CDS 150808 151659 . - 0 ID=cds-WP_012784028.1;Parent=gene-DDE57_RS00760;Dbxref=Genbank:WP_012784028.1;Name=WP_012784028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013619981.1;locus_tag=DDE57_RS00760;product=transketolase;protein_id=WP_012784028.1;transl_table=11 NZ_CP029009.1 RefSeq gene 151725 154496 . - . ID=gene-DDE57_RS00765;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=DDE57_RS00765 NZ_CP029009.1 Protein Homology CDS 151725 154496 . - 0 ID=cds-WP_110473440.1;Parent=gene-DDE57_RS00765;Dbxref=Genbank:WP_110473440.1;Name=WP_110473440.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784027.1;locus_tag=DDE57_RS00765;product=leucine--tRNA ligase;protein_id=WP_110473440.1;transl_table=11 NZ_CP029009.1 RefSeq gene 154565 155851 . - . ID=gene-DDE57_RS00770;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=DDE57_RS00770 NZ_CP029009.1 Protein Homology CDS 154565 155851 . - 0 ID=cds-WP_110473441.1;Parent=gene-DDE57_RS00770;Dbxref=Genbank:WP_110473441.1;Name=WP_110473441.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784026.1;locus_tag=DDE57_RS00770;product=tyrosine--tRNA ligase;protein_id=WP_110473441.1;transl_table=11 NZ_CP029009.1 RefSeq gene 155880 156239 . + . ID=gene-DDE57_RS00775;Name=DDE57_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00775 NZ_CP029009.1 GeneMarkS-2+ CDS 155880 156239 . + 0 ID=cds-WP_110473442.1;Parent=gene-DDE57_RS00775;Dbxref=Genbank:WP_110473442.1;Name=WP_110473442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE57_RS00775;product=hypothetical protein;protein_id=WP_110473442.1;transl_table=11 NZ_CP029009.1 RefSeq gene 156264 157421 . + . ID=gene-DDE57_RS00780;Name=DDE57_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00780 NZ_CP029009.1 Protein Homology CDS 156264 157421 . + 0 ID=cds-WP_110473443.1;Parent=gene-DDE57_RS00780;Dbxref=Genbank:WP_110473443.1;Name=WP_110473443.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784024.1;locus_tag=DDE57_RS00780;product=2-isopropylmalate synthase;protein_id=WP_110473443.1;transl_table=11 NZ_CP029009.1 RefSeq gene 157423 158832 . + . ID=gene-DDE57_RS00785;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=DDE57_RS00785 NZ_CP029009.1 Protein Homology CDS 157423 158832 . + 0 ID=cds-WP_110473444.1;Parent=gene-DDE57_RS00785;Dbxref=Genbank:WP_110473444.1;Name=WP_110473444.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784023.1;locus_tag=DDE57_RS00785;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_110473444.1;transl_table=11 NZ_CP029009.1 RefSeq gene 158839 159426 . + . ID=gene-DDE57_RS00790;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=DDE57_RS00790 NZ_CP029009.1 Protein Homology CDS 158839 159426 . + 0 ID=cds-WP_012784022.1;Parent=gene-DDE57_RS00790;Dbxref=Genbank:WP_012784022.1;Name=WP_012784022.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008270449.1;locus_tag=DDE57_RS00790;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_012784022.1;transl_table=11 NZ_CP029009.1 RefSeq gene 159430 160482 . + . ID=gene-DDE57_RS00795;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=DDE57_RS00795 NZ_CP029009.1 Protein Homology CDS 159430 160482 . + 0 ID=cds-WP_110473445.1;Parent=gene-DDE57_RS00795;Dbxref=Genbank:WP_110473445.1;Name=WP_110473445.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038498.1;locus_tag=DDE57_RS00795;product=3-isopropylmalate dehydrogenase;protein_id=WP_110473445.1;transl_table=11 NZ_CP029009.1 RefSeq gene 160584 161249 . + . ID=gene-DDE57_RS00800;Name=DDE57_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00800 NZ_CP029009.1 Protein Homology CDS 160584 161249 . + 0 ID=cds-WP_110473446.1;Parent=gene-DDE57_RS00800;Dbxref=Genbank:WP_110473446.1;Name=WP_110473446.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012797.2;locus_tag=DDE57_RS00800;product=RNA methyltransferase;protein_id=WP_110473446.1;transl_table=11 NZ_CP029009.1 RefSeq gene 161320 161928 . + . ID=gene-DDE57_RS00805;Name=DDE57_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00805 NZ_CP029009.1 Protein Homology CDS 161320 161928 . + 0 ID=cds-WP_110473447.1;Parent=gene-DDE57_RS00805;Dbxref=Genbank:WP_110473447.1;Name=WP_110473447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784020.1;locus_tag=DDE57_RS00805;product=MarC family protein;protein_id=WP_110473447.1;transl_table=11 NZ_CP029009.1 RefSeq gene 162169 163401 . + . ID=gene-DDE57_RS00815;Name=DDE57_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00815 NZ_CP029009.1 Protein Homology CDS 162169 163401 . + 0 ID=cds-WP_110473449.1;Parent=gene-DDE57_RS00815;Dbxref=Genbank:WP_110473449.1;Name=WP_110473449.1;Ontology_term=GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784019.1;locus_tag=DDE57_RS00815;product=aspartate kinase;protein_id=WP_110473449.1;transl_table=11 NZ_CP029009.1 RefSeq gene 163833 164852 . + . ID=gene-DDE57_RS00820;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=DDE57_RS00820 NZ_CP029009.1 Protein Homology CDS 163833 164852 . + 0 ID=cds-WP_110473450.1;Parent=gene-DDE57_RS00820;Dbxref=Genbank:WP_110473450.1;Name=WP_110473450.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpB;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784018.1;locus_tag=DDE57_RS00820;product=F0F1 ATP synthase subunit A;protein_id=WP_110473450.1;transl_table=11 NZ_CP029009.1 RefSeq gene 164891 165118 . + . ID=gene-DDE57_RS00825;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=DDE57_RS00825 NZ_CP029009.1 Protein Homology CDS 164891 165118 . + 0 ID=cds-WP_110467202.1;Parent=gene-DDE57_RS00825;Dbxref=Genbank:WP_110467202.1;Name=WP_110467202.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpE;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821237.1;locus_tag=DDE57_RS00825;product=ATP synthase F0 subunit C;protein_id=WP_110467202.1;transl_table=11 NZ_CP029009.1 RefSeq gene 165177 165659 . + . ID=gene-DDE57_RS00830;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=DDE57_RS00830 NZ_CP029009.1 Protein Homology CDS 165177 165659 . + 0 ID=cds-WP_110473451.1;Parent=gene-DDE57_RS00830;Dbxref=Genbank:WP_110473451.1;Name=WP_110473451.1;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784016.1;locus_tag=DDE57_RS00830;product=F0F1 ATP synthase subunit B;protein_id=WP_110473451.1;transl_table=11 NZ_CP029009.1 RefSeq gene 165662 166201 . + . ID=gene-DDE57_RS00835;Name=DDE57_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00835 NZ_CP029009.1 Protein Homology CDS 165662 166201 . + 0 ID=cds-WP_110473452.1;Parent=gene-DDE57_RS00835;Dbxref=Genbank:WP_110473452.1;Name=WP_110473452.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: protein motif:HMM:NF012439.2;locus_tag=DDE57_RS00835;product=F0F1 ATP synthase subunit delta;protein_id=WP_110473452.1;transl_table=11 NZ_CP029009.1 RefSeq gene 166208 167794 . + . ID=gene-DDE57_RS00840;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=DDE57_RS00840 NZ_CP029009.1 Protein Homology CDS 166208 167794 . + 0 ID=cds-WP_110473453.1;Parent=gene-DDE57_RS00840;Dbxref=Genbank:WP_110473453.1;Name=WP_110473453.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784014.1;locus_tag=DDE57_RS00840;product=F0F1 ATP synthase subunit alpha;protein_id=WP_110473453.1;transl_table=11 NZ_CP029009.1 RefSeq gene 167787 168623 . + . ID=gene-DDE57_RS00845;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=DDE57_RS00845 NZ_CP029009.1 Protein Homology CDS 167787 168623 . + 0 ID=cds-WP_110473454.1;Parent=gene-DDE57_RS00845;Dbxref=Genbank:WP_110473454.1;Name=WP_110473454.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpG;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784013.1;locus_tag=DDE57_RS00845;product=ATP synthase F1 subunit gamma;protein_id=WP_110473454.1;transl_table=11 NZ_CP029009.1 RefSeq gene 168630 170087 . + . ID=gene-DDE57_RS00850;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=DDE57_RS00850 NZ_CP029009.1 Protein Homology CDS 168630 170087 . + 0 ID=cds-WP_110473455.1;Parent=gene-DDE57_RS00850;Dbxref=Genbank:WP_110473455.1;Name=WP_110473455.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784012.1;locus_tag=DDE57_RS00850;product=glutamate--tRNA ligase;protein_id=WP_110473455.1;transl_table=11 NZ_CP029009.1 RefSeq gene 170070 170870 . - . ID=gene-DDE57_RS00855;Name=DDE57_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00855 NZ_CP029009.1 Protein Homology CDS 170070 170870 . - 0 ID=cds-WP_110473456.1;Parent=gene-DDE57_RS00855;Dbxref=Genbank:WP_110473456.1;Name=WP_110473456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315499.1;locus_tag=DDE57_RS00855;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_110473456.1;transl_table=11 NZ_CP029009.1 RefSeq gene 170878 172542 . - . ID=gene-DDE57_RS00860;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=DDE57_RS00860 NZ_CP029009.1 Protein Homology CDS 170878 172542 . - 0 ID=cds-WP_110473457.1;Parent=gene-DDE57_RS00860;Dbxref=Genbank:WP_110473457.1;Name=WP_110473457.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784010.1;locus_tag=DDE57_RS00860;product=methionine--tRNA ligase;protein_id=WP_110473457.1;transl_table=11 NZ_CP029009.1 RefSeq gene 172543 173142 . - . ID=gene-DDE57_RS00865;Name=DDE57_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00865 NZ_CP029009.1 Protein Homology CDS 172543 173142 . - 0 ID=cds-WP_110473458.1;Parent=gene-DDE57_RS00865;Dbxref=Genbank:WP_110473458.1;Name=WP_110473458.1;Ontology_term=GO:0006412,GO:0006950,GO:0003735,GO:0008097,GO:0000315,GO:0022625;gbkey=CDS;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784009.1;locus_tag=DDE57_RS00865;product=50S ribosomal protein L25;protein_id=WP_110473458.1;transl_table=11 NZ_CP029009.1 RefSeq gene 173155 174060 . - . ID=gene-DDE57_RS00870;Name=DDE57_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00870 NZ_CP029009.1 Protein Homology CDS 173155 174060 . - 0 ID=cds-WP_110473459.1;Parent=gene-DDE57_RS00870;Dbxref=Genbank:WP_110473459.1;Name=WP_110473459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784008.1;locus_tag=DDE57_RS00870;product=ribose-phosphate pyrophosphokinase;protein_id=WP_110473459.1;transl_table=11 NZ_CP029009.1 RefSeq gene 174092 174162 . + . ID=gene-DDE57_RS00875;Name=DDE57_RS00875;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00875 NZ_CP029009.1 tRNAscan-SE tRNA 174092 174162 . + . ID=rna-DDE57_RS00875;Parent=gene-DDE57_RS00875;anticodon=(pos:174124..174126);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00875;product=tRNA-Cys NZ_CP029009.1 tRNAscan-SE exon 174092 174162 . + . ID=exon-DDE57_RS00875-1;Parent=rna-DDE57_RS00875;anticodon=(pos:174124..174126);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00875;product=tRNA-Cys NZ_CP029009.1 RefSeq gene 174252 174917 . - . ID=gene-DDE57_RS00880;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=DDE57_RS00880 NZ_CP029009.1 Protein Homology CDS 174252 174917 . - 0 ID=cds-WP_110473460.1;Parent=gene-DDE57_RS00880;Dbxref=Genbank:WP_110473460.1;Name=WP_110473460.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784007.1;locus_tag=DDE57_RS00880;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_110473460.1;transl_table=11 NZ_CP029009.1 RefSeq gene 174934 175383 . + . ID=gene-DDE57_RS00885;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=DDE57_RS00885 NZ_CP029009.1 Protein Homology CDS 174934 175383 . + 0 ID=cds-WP_110473461.1;Parent=gene-DDE57_RS00885;Dbxref=Genbank:WP_110473461.1;Name=WP_110473461.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038486.1;locus_tag=DDE57_RS00885;product=rRNA maturation RNase YbeY;protein_id=WP_110473461.1;transl_table=11 NZ_CP029009.1 RefSeq gene 175376 177244 . + . ID=gene-DDE57_RS00890;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=DDE57_RS00890 NZ_CP029009.1 Protein Homology CDS 175376 177244 . + 0 ID=cds-WP_110473462.1;Parent=gene-DDE57_RS00890;Dbxref=Genbank:WP_110473462.1;Name=WP_110473462.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784005.1;locus_tag=DDE57_RS00890;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_110473462.1;transl_table=11 NZ_CP029009.1 RefSeq gene 177258 178895 . + . ID=gene-DDE57_RS00895;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=DDE57_RS00895 NZ_CP029009.1 Protein Homology CDS 177258 178895 . + 0 ID=cds-WP_110473463.1;Parent=gene-DDE57_RS00895;Dbxref=Genbank:WP_110473463.1;Name=WP_110473463.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784004.1;locus_tag=DDE57_RS00895;product=glutamine--tRNA ligase;protein_id=WP_110473463.1;transl_table=11 NZ_CP029009.1 RefSeq gene 178901 179125 . - . ID=gene-DDE57_RS00900;Name=DDE57_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00900 NZ_CP029009.1 Protein Homology CDS 178901 179125 . - 0 ID=cds-WP_110473557.1;Parent=gene-DDE57_RS00900;Dbxref=Genbank:WP_110473557.1;Name=WP_110473557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784003.1;locus_tag=DDE57_RS00900;product=ferredoxin;protein_id=WP_110473557.1;transl_table=11 NZ_CP029009.1 RefSeq gene 179130 180359 . - . ID=gene-DDE57_RS00905;Name=DDE57_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00905 NZ_CP029009.1 Protein Homology CDS 179130 180359 . - 0 ID=cds-WP_110473464.1;Parent=gene-DDE57_RS00905;Dbxref=Genbank:WP_110473464.1;Name=WP_110473464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784002.1;locus_tag=DDE57_RS00905;product=U32 family peptidase;protein_id=WP_110473464.1;transl_table=11 NZ_CP029009.1 RefSeq gene 180380 181459 . + . ID=gene-DDE57_RS00910;Name=DDE57_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00910 NZ_CP029009.1 Protein Homology CDS 180380 181459 . + 0 ID=cds-WP_110473465.1;Parent=gene-DDE57_RS00910;Dbxref=Genbank:WP_110473465.1;Name=WP_110473465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012784001.1;locus_tag=DDE57_RS00910;product=DNA polymerase III subunit delta';protein_id=WP_110473465.1;transl_table=11 NZ_CP029009.1 RefSeq gene 181466 183268 . + . ID=gene-DDE57_RS00915;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=DDE57_RS00915 NZ_CP029009.1 Protein Homology CDS 181466 183268 . + 0 ID=cds-WP_110473466.1;Parent=gene-DDE57_RS00915;Dbxref=Genbank:WP_110473466.1;Name=WP_110473466.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315488.1;locus_tag=DDE57_RS00915;product=translation elongation factor 4;protein_id=WP_110473466.1;transl_table=11 NZ_CP029009.1 RefSeq gene 183307 183381 . + . ID=gene-DDE57_RS00920;Name=DDE57_RS00920;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00920 NZ_CP029009.1 tRNAscan-SE tRNA 183307 183381 . + . ID=rna-DDE57_RS00920;Parent=gene-DDE57_RS00920;anticodon=(pos:183342..183344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00920;product=tRNA-Asn NZ_CP029009.1 tRNAscan-SE exon 183307 183381 . + . ID=exon-DDE57_RS00920-1;Parent=rna-DDE57_RS00920;anticodon=(pos:183342..183344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00920;product=tRNA-Asn NZ_CP029009.1 RefSeq gene 183343 183942 . - . ID=gene-DDE57_RS00925;Name=DDE57_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00925 NZ_CP029009.1 Protein Homology CDS 183343 183942 . - 0 ID=cds-WP_110473558.1;Parent=gene-DDE57_RS00925;Dbxref=Genbank:WP_110473558.1;Name=WP_110473558.1;Ontology_term=GO:0006508,GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013421.2;locus_tag=DDE57_RS00925;product=signal peptidase II;protein_id=WP_110473558.1;transl_table=11 NZ_CP029009.1 RefSeq gene 183952 187320 . - . ID=gene-DDE57_RS00930;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=DDE57_RS00930 NZ_CP029009.1 Protein Homology CDS 183952 187320 . - 0 ID=cds-WP_110473467.1;Parent=gene-DDE57_RS00930;Dbxref=Genbank:WP_110473467.1;Name=WP_110473467.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: protein motif:HMM:TIGR00392.1;locus_tag=DDE57_RS00930;product=isoleucine--tRNA ligase;protein_id=WP_110473467.1;transl_table=11 NZ_CP029009.1 RefSeq gene 187350 187422 . - . ID=gene-DDE57_RS00935;Name=DDE57_RS00935;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00935 NZ_CP029009.1 tRNAscan-SE tRNA 187350 187422 . - . ID=rna-DDE57_RS00935;Parent=gene-DDE57_RS00935;anticodon=(pos:complement(187387..187389));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00935;product=tRNA-Met NZ_CP029009.1 tRNAscan-SE exon 187350 187422 . - . ID=exon-DDE57_RS00935-1;Parent=rna-DDE57_RS00935;anticodon=(pos:complement(187387..187389));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00935;product=tRNA-Met NZ_CP029009.1 RefSeq gene 187468 188223 . - . ID=gene-DDE57_RS00940;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=DDE57_RS00940 NZ_CP029009.1 Protein Homology CDS 187468 188223 . - 0 ID=cds-WP_110473468.1;Parent=gene-DDE57_RS00940;Dbxref=Genbank:WP_110473468.1;Name=WP_110473468.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012783997.1;locus_tag=DDE57_RS00940;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_110473468.1;transl_table=11 NZ_CP029009.1 RefSeq gene 188370 189452 . + . ID=gene-DDE57_RS00945;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=DDE57_RS00945 NZ_CP029009.1 Protein Homology CDS 188370 189452 . + 0 ID=cds-WP_110473469.1;Parent=gene-DDE57_RS00945;Dbxref=Genbank:WP_110473469.1;Name=WP_110473469.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799451.1;locus_tag=DDE57_RS00945;product=peptide chain release factor 2;protein_id=WP_110473469.1;transl_table=11 NZ_CP029009.1 RefSeq gene 189503 190228 . + . ID=gene-DDE57_RS00950;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=DDE57_RS00950 NZ_CP029009.1 Protein Homology CDS 189503 190228 . + 0 ID=cds-WP_110473470.1;Parent=gene-DDE57_RS00950;Dbxref=Genbank:WP_110473470.1;Name=WP_110473470.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799452.1;locus_tag=DDE57_RS00950;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_110473470.1;transl_table=11 NZ_CP029009.1 RefSeq gene 190238 191473 . + . ID=gene-DDE57_RS00955;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=DDE57_RS00955 NZ_CP029009.1 Protein Homology CDS 190238 191473 . + 0 ID=cds-WP_110473471.1;Parent=gene-DDE57_RS00955;Dbxref=Genbank:WP_110473471.1;Name=WP_110473471.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799453.1;locus_tag=DDE57_RS00955;product=signal peptidase I;protein_id=WP_110473471.1;transl_table=11 NZ_CP029009.1 RefSeq gene 191629 191841 . + . ID=gene-DDE57_RS00960;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=DDE57_RS00960 NZ_CP029009.1 Protein Homology CDS 191629 191841 . + 0 ID=cds-WP_110473472.1;Parent=gene-DDE57_RS00960;Dbxref=Genbank:WP_110473472.1;Name=WP_110473472.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012821626.1;locus_tag=DDE57_RS00960;product=30S ribosomal protein S21;protein_id=WP_110473472.1;transl_table=11 NZ_CP029009.1 RefSeq gene 191843 192616 . + . ID=gene-DDE57_RS00965;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=DDE57_RS00965 NZ_CP029009.1 Protein Homology CDS 191843 192616 . + 0 ID=cds-WP_110473473.1;Parent=gene-DDE57_RS00965;Dbxref=Genbank:WP_110473473.1;Name=WP_110473473.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799455.1;locus_tag=DDE57_RS00965;product=shikimate dehydrogenase;protein_id=WP_110473473.1;transl_table=11 NZ_CP029009.1 RefSeq gene 192613 193593 . - . ID=gene-DDE57_RS00970;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=DDE57_RS00970 NZ_CP029009.1 Protein Homology CDS 192613 193593 . - 0 ID=cds-WP_110473474.1;Parent=gene-DDE57_RS00970;Dbxref=Genbank:WP_110473474.1;Name=WP_110473474.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799456.1;locus_tag=DDE57_RS00970;product=GTPase ObgE;protein_id=WP_110473474.1;transl_table=11 NZ_CP029009.1 RefSeq gene 193597 195000 . - . ID=gene-DDE57_RS00975;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=DDE57_RS00975 NZ_CP029009.1 Protein Homology CDS 193597 195000 . - 0 ID=cds-WP_110473475.1;Parent=gene-DDE57_RS00975;Dbxref=Genbank:WP_110473475.1;Name=WP_110473475.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743889.1;locus_tag=DDE57_RS00975;product=dihydrolipoyl dehydrogenase;protein_id=WP_110473475.1;transl_table=11 NZ_CP029009.1 RefSeq gene 195027 195111 . - . ID=gene-DDE57_RS00980;Name=DDE57_RS00980;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00980 NZ_CP029009.1 tRNAscan-SE tRNA 195027 195111 . - . ID=rna-DDE57_RS00980;Parent=gene-DDE57_RS00980;anticodon=(pos:complement(195075..195077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00980;product=tRNA-Leu NZ_CP029009.1 tRNAscan-SE exon 195027 195111 . - . ID=exon-DDE57_RS00980-1;Parent=rna-DDE57_RS00980;anticodon=(pos:complement(195075..195077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00980;product=tRNA-Leu NZ_CP029009.1 RefSeq gene 195119 195496 . - . ID=gene-DDE57_RS00985;Name=DDE57_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS00985 NZ_CP029009.1 Protein Homology CDS 195119 195496 . - 0 ID=cds-WP_110473476.1;Parent=gene-DDE57_RS00985;Dbxref=Genbank:WP_110473476.1;Name=WP_110473476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799458.1;locus_tag=DDE57_RS00985;product=START-like domain-containing protein;protein_id=WP_110473476.1;transl_table=11 NZ_CP029009.1 RefSeq gene 195596 195669 . + . ID=gene-DDE57_RS00990;Name=DDE57_RS00990;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS00990 NZ_CP029009.1 tRNAscan-SE tRNA 195596 195669 . + . ID=rna-DDE57_RS00990;Parent=gene-DDE57_RS00990;anticodon=(pos:195630..195632);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00990;product=tRNA-Met NZ_CP029009.1 tRNAscan-SE exon 195596 195669 . + . ID=exon-DDE57_RS00990-1;Parent=rna-DDE57_RS00990;anticodon=(pos:195630..195632);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS00990;product=tRNA-Met NZ_CP029009.1 RefSeq gene 195710 197053 . + . ID=gene-DDE57_RS00995;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=DDE57_RS00995 NZ_CP029009.1 Protein Homology CDS 195710 197053 . + 0 ID=cds-WP_110473477.1;Parent=gene-DDE57_RS00995;Dbxref=Genbank:WP_110473477.1;Name=WP_110473477.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: protein motif:HMM:TIGR00344.1;locus_tag=DDE57_RS00995;product=alanine--tRNA ligase;protein_id=WP_110473477.1;transl_table=11 NZ_CP029009.1 RefSeq gene 197046 199748 . + . ID=gene-DDE57_RS01000;Name=DDE57_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01000 NZ_CP029009.1 Protein Homology CDS 197046 199748 . + 0 ID=cds-WP_110473478.1;Parent=gene-DDE57_RS01000;Dbxref=Genbank:WP_110473478.1;Name=WP_110473478.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799460.1;locus_tag=DDE57_RS01000;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_110473478.1;transl_table=11 NZ_CP029009.1 RefSeq gene 199762 200868 . + . ID=gene-DDE57_RS01005;Name=DDE57_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01005 NZ_CP029009.1 Protein Homology CDS 199762 200868 . + 0 ID=cds-WP_110473479.1;Parent=gene-DDE57_RS01005;Dbxref=Genbank:WP_110473479.1;Name=WP_110473479.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799461.1;locus_tag=DDE57_RS01005;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_110473479.1;transl_table=11 NZ_CP029009.1 RefSeq gene 200889 201671 . + . ID=gene-DDE57_RS01010;Name=DDE57_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01010 NZ_CP029009.1 Protein Homology CDS 200889 201671 . + 0 ID=cds-WP_110473480.1;Parent=gene-DDE57_RS01010;Dbxref=Genbank:WP_110473480.1;Name=WP_110473480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799462.1;locus_tag=DDE57_RS01010;product=twin-arginine translocase subunit TatC;protein_id=WP_110473480.1;transl_table=11 NZ_CP029009.1 RefSeq gene 201654 202106 . - . ID=gene-DDE57_RS01015;Name=DDE57_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01015 NZ_CP029009.1 Protein Homology CDS 201654 202106 . - 0 ID=cds-WP_110473481.1;Parent=gene-DDE57_RS01015;Dbxref=Genbank:WP_110473481.1;Name=WP_110473481.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799463.1;locus_tag=DDE57_RS01015;product=SsrA-binding protein;protein_id=WP_110473481.1;transl_table=11 NZ_CP029009.1 RefSeq gene 202123 203736 . + . ID=gene-DDE57_RS01020;Name=DDE57_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01020 NZ_CP029009.1 Protein Homology CDS 202123 203736 . + 0 ID=cds-WP_110473482.1;Parent=gene-DDE57_RS01020;Dbxref=Genbank:WP_110473482.1;Name=WP_110473482.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799464.1;locus_tag=DDE57_RS01020;product=ATP-binding cassette domain-containing protein;protein_id=WP_110473482.1;transl_table=11 NZ_CP029009.1 RefSeq gene 203723 204025 . + . ID=gene-DDE57_RS01025;Name=DDE57_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01025 NZ_CP029009.1 Protein Homology CDS 203723 204025 . + 0 ID=cds-WP_110480454.1;Parent=gene-DDE57_RS01025;Dbxref=Genbank:WP_110480454.1;Name=WP_110480454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799465.1;locus_tag=DDE57_RS01025;product=iron-sulfur cluster assembly protein;protein_id=WP_110480454.1;transl_table=11 NZ_CP029009.1 RefSeq gene 204091 204423 . + . ID=gene-DDE57_RS01030;Name=DDE57_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01030 NZ_CP029009.1 Protein Homology CDS 204091 204423 . + 0 ID=cds-WP_110473483.1;Parent=gene-DDE57_RS01030;Dbxref=Genbank:WP_110473483.1;Name=WP_110473483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799466.1;locus_tag=DDE57_RS01030;product=DUF3127 domain-containing protein;protein_id=WP_110473483.1;transl_table=11 NZ_CP029009.1 RefSeq gene 204589 206220 . - . ID=gene-DDE57_RS01035;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=DDE57_RS01035 NZ_CP029009.1 Protein Homology CDS 204589 206220 . - 0 ID=cds-WP_110473484.1;Parent=gene-DDE57_RS01035;Dbxref=Genbank:WP_110473484.1;Name=WP_110473484.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743854.1;locus_tag=DDE57_RS01035;product=chaperonin GroEL;protein_id=WP_110473484.1;transl_table=11 NZ_CP029009.1 RefSeq gene 206268 206549 . - . ID=gene-DDE57_RS01040;Name=DDE57_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01040 NZ_CP029009.1 Protein Homology CDS 206268 206549 . - 0 ID=cds-WP_110473485.1;Parent=gene-DDE57_RS01040;Dbxref=Genbank:WP_110473485.1;Name=WP_110473485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799468.1;locus_tag=DDE57_RS01040;product=co-chaperone GroES;protein_id=WP_110473485.1;transl_table=11 NZ_CP029009.1 RefSeq gene 206761 208125 . - . ID=gene-DDE57_RS01045;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=DDE57_RS01045 NZ_CP029009.1 Protein Homology CDS 206761 208125 . - 0 ID=cds-WP_110473486.1;Parent=gene-DDE57_RS01045;Dbxref=Genbank:WP_110473486.1;Name=WP_110473486.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799469.1;locus_tag=DDE57_RS01045;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_110473486.1;transl_table=11 NZ_CP029009.1 RefSeq gene 208176 209579 . + . ID=gene-DDE57_RS01050;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=DDE57_RS01050 NZ_CP029009.1 Protein Homology CDS 208176 209579 . + 0 ID=cds-WP_110473487.1;Parent=gene-DDE57_RS01050;Dbxref=Genbank:WP_110473487.1;Name=WP_110473487.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799470.1;locus_tag=DDE57_RS01050;product=Fe-S cluster assembly protein SufB;protein_id=WP_110473487.1;transl_table=11 NZ_CP029009.1 RefSeq gene 209596 210354 . + . ID=gene-DDE57_RS01055;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=DDE57_RS01055 NZ_CP029009.1 Protein Homology CDS 209596 210354 . + 0 ID=cds-WP_015799471.1;Parent=gene-DDE57_RS01055;Dbxref=Genbank:WP_015799471.1;Name=WP_015799471.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014166656.1;locus_tag=DDE57_RS01055;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_015799471.1;transl_table=11 NZ_CP029009.1 RefSeq gene 210341 211639 . + . ID=gene-DDE57_RS01060;Name=DDE57_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01060 NZ_CP029009.1 Protein Homology CDS 210341 211639 . + 0 ID=cds-WP_110473560.1;Parent=gene-DDE57_RS01060;Dbxref=Genbank:WP_110473560.1;Name=WP_110473560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799472.1;locus_tag=DDE57_RS01060;product=SufD family Fe-S cluster assembly protein;protein_id=WP_110473560.1;transl_table=11 NZ_CP029009.1 RefSeq gene 211629 212849 . + . ID=gene-DDE57_RS01065;Name=DDE57_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01065 NZ_CP029009.1 Protein Homology CDS 211629 212849 . + 0 ID=cds-WP_110473488.1;Parent=gene-DDE57_RS01065;Dbxref=Genbank:WP_110473488.1;Name=WP_110473488.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799473.1;locus_tag=DDE57_RS01065;product=SufS family cysteine desulfurase;protein_id=WP_110473488.1;transl_table=11 NZ_CP029009.1 RefSeq gene 212876 213919 . + . ID=gene-DDE57_RS01070;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=DDE57_RS01070 NZ_CP029009.1 Protein Homology CDS 212876 213919 . + 0 ID=cds-WP_110473489.1;Parent=gene-DDE57_RS01070;Dbxref=Genbank:WP_110473489.1;Name=WP_110473489.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: protein motif:HMM:TIGR01953.1;locus_tag=DDE57_RS01070;product=transcription termination factor NusA;protein_id=WP_110473489.1;transl_table=11 NZ_CP029009.1 RefSeq gene 213912 215531 . + . ID=gene-DDE57_RS01075;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=DDE57_RS01075 NZ_CP029009.1 Protein Homology CDS 213912 215531 . + 0 ID=cds-WP_110473490.1;Parent=gene-DDE57_RS01075;Dbxref=Genbank:WP_110473490.1;Name=WP_110473490.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799475.1;locus_tag=DDE57_RS01075;product=translation initiation factor IF-2;protein_id=WP_110473490.1;transl_table=11 NZ_CP029009.1 RefSeq gene 215532 216620 . - . ID=gene-DDE57_RS01080;Name=DDE57_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01080 NZ_CP029009.1 Protein Homology CDS 215532 216620 . - 0 ID=cds-WP_110473561.1;Parent=gene-DDE57_RS01080;Dbxref=Genbank:WP_110473561.1;Name=WP_110473561.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799476.1;locus_tag=DDE57_RS01080;product=chorismate mutase;protein_id=WP_110473561.1;transl_table=11 NZ_CP029009.1 RefSeq gene 216676 217830 . - . ID=gene-DDE57_RS01085;Name=DDE57_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01085 NZ_CP029009.1 Protein Homology CDS 216676 217830 . - 0 ID=cds-WP_110473491.1;Parent=gene-DDE57_RS01085;Dbxref=Genbank:WP_110473491.1;Name=WP_110473491.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799477.1;locus_tag=DDE57_RS01085;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_110473491.1;transl_table=11 NZ_CP029009.1 RefSeq gene 217827 218657 . - . ID=gene-DDE57_RS01090;Name=DDE57_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01090 NZ_CP029009.1 Protein Homology CDS 217827 218657 . - 0 ID=cds-WP_239493727.1;Parent=gene-DDE57_RS01090;Dbxref=Genbank:WP_239493727.1;Name=WP_239493727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799478.1;locus_tag=DDE57_RS01090;product=prephenate dehydratase;protein_id=WP_239493727.1;transl_table=11 NZ_CP029009.1 RefSeq gene 218668 219663 . - . ID=gene-DDE57_RS01095;Name=DDE57_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01095 NZ_CP029009.1 Protein Homology CDS 218668 219663 . - 0 ID=cds-WP_110473493.1;Parent=gene-DDE57_RS01095;Dbxref=Genbank:WP_110473493.1;Name=WP_110473493.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=cellular amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799479.1;locus_tag=DDE57_RS01095;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_110473493.1;transl_table=11 NZ_CP029009.1 RefSeq gene 219700 219966 . - . ID=gene-DDE57_RS01100;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=DDE57_RS01100 NZ_CP029009.1 Protein Homology CDS 219700 219966 . - 0 ID=cds-WP_110473494.1;Parent=gene-DDE57_RS01100;Dbxref=Genbank:WP_110473494.1;Name=WP_110473494.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799480.1;locus_tag=DDE57_RS01100;product=30S ribosomal protein S20;protein_id=WP_110473494.1;transl_table=11 NZ_CP029009.1 RefSeq gene 219989 220060 . - . ID=gene-DDE57_RS01105;Name=DDE57_RS01105;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS01105 NZ_CP029009.1 tRNAscan-SE tRNA 219989 220060 . - . ID=rna-DDE57_RS01105;Parent=gene-DDE57_RS01105;anticodon=(pos:complement(220025..220027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS01105;product=tRNA-Glu NZ_CP029009.1 tRNAscan-SE exon 219989 220060 . - . ID=exon-DDE57_RS01105-1;Parent=rna-DDE57_RS01105;anticodon=(pos:complement(220025..220027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS01105;product=tRNA-Glu NZ_CP029009.1 RefSeq gene 220073 221320 . - . ID=gene-DDE57_RS01110;Name=DDE57_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01110 NZ_CP029009.1 Protein Homology CDS 220073 221320 . - 0 ID=cds-WP_110473495.1;Parent=gene-DDE57_RS01110;Dbxref=Genbank:WP_110473495.1;Name=WP_110473495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038611.1;locus_tag=DDE57_RS01110;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_110473495.1;transl_table=11 NZ_CP029009.1 RefSeq gene 221292 221849 . - . ID=gene-DDE57_RS01115;Name=DDE57_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01115 NZ_CP029009.1 GeneMarkS-2+ CDS 221292 221849 . - 0 ID=cds-WP_110473496.1;Parent=gene-DDE57_RS01115;Dbxref=Genbank:WP_110473496.1;Name=WP_110473496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE57_RS01115;product=hypothetical protein;protein_id=WP_110473496.1;transl_table=11 NZ_CP029009.1 RefSeq gene 221856 222194 . - . ID=gene-DDE57_RS01120;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=DDE57_RS01120 NZ_CP029009.1 Protein Homology CDS 221856 222194 . - 0 ID=cds-WP_110473497.1;Parent=gene-DDE57_RS01120;Dbxref=Genbank:WP_110473497.1;Name=WP_110473497.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726594.1;locus_tag=DDE57_RS01120;product=30S ribosomal protein S16;protein_id=WP_110473497.1;transl_table=11 NZ_CP029009.1 RefSeq gene 222251 222321 . + . ID=gene-DDE57_RS01125;Name=DDE57_RS01125;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS01125 NZ_CP029009.1 tRNAscan-SE tRNA 222251 222321 . + . ID=rna-DDE57_RS01125;Parent=gene-DDE57_RS01125;anticodon=(pos:222283..222285);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS01125;product=tRNA-Gln NZ_CP029009.1 tRNAscan-SE exon 222251 222321 . + . ID=exon-DDE57_RS01125-1;Parent=rna-DDE57_RS01125;anticodon=(pos:222283..222285);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS01125;product=tRNA-Gln NZ_CP029009.1 RefSeq gene 222323 222805 . - . ID=gene-DDE57_RS01130;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=DDE57_RS01130 NZ_CP029009.1 Protein Homology CDS 222323 222805 . - 0 ID=cds-WP_110473498.1;Parent=gene-DDE57_RS01130;Dbxref=Genbank:WP_110473498.1;Name=WP_110473498.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greA;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014791362.1;locus_tag=DDE57_RS01130;product=transcription elongation factor GreA;protein_id=WP_110473498.1;transl_table=11 NZ_CP029009.1 RefSeq gene 222841 224751 . - . ID=gene-DDE57_RS01135;Name=DDE57_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01135 NZ_CP029009.1 Protein Homology CDS 222841 224751 . - 0 ID=cds-WP_110473499.1;Parent=gene-DDE57_RS01135;Dbxref=Genbank:WP_110473499.1;Name=WP_110473499.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799485.1;locus_tag=DDE57_RS01135;product=DNA gyrase subunit B;protein_id=WP_110473499.1;transl_table=11 NZ_CP029009.1 RefSeq gene 224765 225412 . - . ID=gene-DDE57_RS01140;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=DDE57_RS01140 NZ_CP029009.1 Protein Homology CDS 224765 225412 . - 0 ID=cds-WP_110473500.1;Parent=gene-DDE57_RS01140;Dbxref=Genbank:WP_110473500.1;Name=WP_110473500.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315653.1;locus_tag=DDE57_RS01140;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_110473500.1;transl_table=11 NZ_CP029009.1 RefSeq gene 225424 226602 . + . ID=gene-DDE57_RS01145;Name=DDE57_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01145 NZ_CP029009.1 Protein Homology CDS 225424 226602 . + 0 ID=cds-WP_110473501.1;Parent=gene-DDE57_RS01145;Dbxref=Genbank:WP_110473501.1;Name=WP_110473501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799487.1;locus_tag=DDE57_RS01145;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_110473501.1;transl_table=11 NZ_CP029009.1 RefSeq gene 226787 226978 . + . ID=gene-DDE57_RS01150;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=DDE57_RS01150 NZ_CP029009.1 Protein Homology CDS 226787 226978 . + 0 ID=cds-WP_015799488.1;Parent=gene-DDE57_RS01150;Dbxref=Genbank:WP_015799488.1;Name=WP_015799488.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013186235.1;locus_tag=DDE57_RS01150;product=50S ribosomal protein L32;protein_id=WP_015799488.1;transl_table=11 NZ_CP029009.1 RefSeq gene 226950 227933 . - . ID=gene-DDE57_RS01155;Name=DDE57_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01155 NZ_CP029009.1 Protein Homology CDS 226950 227933 . - 0 ID=cds-WP_110473502.1;Parent=gene-DDE57_RS01155;Dbxref=Genbank:WP_110473502.1;Name=WP_110473502.1;Ontology_term=GO:0006086,GO:0004739;gbkey=CDS;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799489.1;locus_tag=DDE57_RS01155;product=pyruvate dehydrogenase complex E1 component subunit beta;protein_id=WP_110473502.1;transl_table=11 NZ_CP029009.1 RefSeq gene 227935 228984 . - . ID=gene-DDE57_RS01160;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=DDE57_RS01160 NZ_CP029009.1 Protein Homology CDS 227935 228984 . - 0 ID=cds-WP_110467337.1;Parent=gene-DDE57_RS01160;Dbxref=Genbank:WP_110467337.1;Name=WP_110467337.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018675626.1;locus_tag=DDE57_RS01160;product=class II fructose-bisphosphate aldolase;protein_id=WP_110467337.1;transl_table=11 NZ_CP029009.1 RefSeq gene 229191 229346 . - . ID=gene-DDE57_RS01480;Name=DDE57_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01480 NZ_CP029009.1 GeneMarkS-2+ CDS 229191 229346 . - 0 ID=cds-WP_162616780.1;Parent=gene-DDE57_RS01480;Dbxref=Genbank:WP_162616780.1;Name=WP_162616780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=DDE57_RS01480;product=hypothetical protein;protein_id=WP_162616780.1;transl_table=11 NZ_CP029009.1 RefSeq gene 229993 231045 . - . ID=gene-DDE57_RS01175;Name=DDE57_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01175 NZ_CP029009.1 Protein Homology CDS 229993 231045 . - 0 ID=cds-WP_110473504.1;Parent=gene-DDE57_RS01175;Dbxref=Genbank:WP_110473504.1;Name=WP_110473504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799491.1;locus_tag=DDE57_RS01175;product=RNA polymerase sigma factor RpoD/SigA;protein_id=WP_110473504.1;transl_table=11 NZ_CP029009.1 RefSeq gene 231058 233133 . - . ID=gene-DDE57_RS01180;Name=DDE57_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01180 NZ_CP029009.1 Protein Homology CDS 231058 233133 . - 0 ID=cds-WP_110473505.1;Parent=gene-DDE57_RS01180;Dbxref=Genbank:WP_110473505.1;Name=WP_110473505.1;Ontology_term=GO:0006396,GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=RNA processing|0006396||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799492.1;locus_tag=DDE57_RS01180;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_110473505.1;transl_table=11 NZ_CP029009.1 RefSeq gene 233142 233429 . - . ID=gene-DDE57_RS01185;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=DDE57_RS01185 NZ_CP029009.1 Protein Homology CDS 233142 233429 . - 0 ID=cds-WP_110473506.1;Parent=gene-DDE57_RS01185;Dbxref=Genbank:WP_110473506.1;Name=WP_110473506.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012840654.1;locus_tag=DDE57_RS01185;product=30S ribosomal protein S15;protein_id=WP_110473506.1;transl_table=11 NZ_CP029009.1 RefSeq gene 233447 234166 . - . ID=gene-DDE57_RS01190;Name=DDE57_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01190 NZ_CP029009.1 Protein Homology CDS 233447 234166 . - 0 ID=cds-WP_110473507.1;Parent=gene-DDE57_RS01190;Dbxref=Genbank:WP_110473507.1;Name=WP_110473507.1;Ontology_term=GO:0008299,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799494.1;locus_tag=DDE57_RS01190;product=ubiquinone/menaquinone biosynthesis methyltransferase;protein_id=WP_110473507.1;transl_table=11 NZ_CP029009.1 RefSeq gene 234199 234441 . + . ID=gene-DDE57_RS01195;Name=DDE57_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01195 NZ_CP029009.1 Protein Homology CDS 234199 234441 . + 0 ID=cds-WP_110473508.1;Parent=gene-DDE57_RS01195;Dbxref=Genbank:WP_110473508.1;Name=WP_110473508.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799495.1;locus_tag=DDE57_RS01195;product=type B 50S ribosomal protein L31;protein_id=WP_110473508.1;transl_table=11 NZ_CP029009.1 RefSeq gene 234489 234863 . + . ID=gene-DDE57_RS01200;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=DDE57_RS01200 NZ_CP029009.1 Protein Homology CDS 234489 234863 . + 0 ID=cds-WP_110473509.1;Parent=gene-DDE57_RS01200;Dbxref=Genbank:WP_110473509.1;Name=WP_110473509.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006795815.1;locus_tag=DDE57_RS01200;product=30S ribosomal protein S12;protein_id=WP_110473509.1;transl_table=11 NZ_CP029009.1 RefSeq gene 234869 235345 . + . ID=gene-DDE57_RS01205;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=DDE57_RS01205 NZ_CP029009.1 Protein Homology CDS 234869 235345 . + 0 ID=cds-WP_110473510.1;Parent=gene-DDE57_RS01205;Dbxref=Genbank:WP_110473510.1;Name=WP_110473510.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009415342.1;locus_tag=DDE57_RS01205;product=30S ribosomal protein S7;protein_id=WP_110473510.1;transl_table=11 NZ_CP029009.1 RefSeq gene 235356 237446 . + . ID=gene-DDE57_RS01210;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=DDE57_RS01210 NZ_CP029009.1 Protein Homology CDS 235356 237446 . + 0 ID=cds-WP_110473511.1;Parent=gene-DDE57_RS01210;Dbxref=Genbank:WP_110473511.1;Name=WP_110473511.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038623.1;locus_tag=DDE57_RS01210;product=elongation factor G;protein_id=WP_110473511.1;transl_table=11 NZ_CP029009.1 RefSeq gene 237453 237758 . + . ID=gene-DDE57_RS01215;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=DDE57_RS01215 NZ_CP029009.1 Protein Homology CDS 237453 237758 . + 0 ID=cds-WP_110473512.1;Parent=gene-DDE57_RS01215;Dbxref=Genbank:WP_110473512.1;Name=WP_110473512.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011963470.1;locus_tag=DDE57_RS01215;product=30S ribosomal protein S10;protein_id=WP_110473512.1;transl_table=11 NZ_CP029009.1 RefSeq gene 237766 238383 . + . ID=gene-DDE57_RS01220;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=DDE57_RS01220 NZ_CP029009.1 Protein Homology CDS 237766 238383 . + 0 ID=cds-WP_110467346.1;Parent=gene-DDE57_RS01220;Dbxref=Genbank:WP_110467346.1;Name=WP_110467346.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799500.1;locus_tag=DDE57_RS01220;product=50S ribosomal protein L3;protein_id=WP_110467346.1;transl_table=11 NZ_CP029009.1 RefSeq gene 238387 239013 . + . ID=gene-DDE57_RS01225;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=DDE57_RS01225 NZ_CP029009.1 Protein Homology CDS 238387 239013 . + 0 ID=cds-WP_110473513.1;Parent=gene-DDE57_RS01225;Dbxref=Genbank:WP_110473513.1;Name=WP_110473513.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038625.1;locus_tag=DDE57_RS01225;product=50S ribosomal protein L4;protein_id=WP_110473513.1;transl_table=11 NZ_CP029009.1 RefSeq gene 239024 239614 . + . ID=gene-DDE57_RS01230;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=DDE57_RS01230 NZ_CP029009.1 Protein Homology CDS 239024 239614 . + 0 ID=cds-WP_162616781.1;Parent=gene-DDE57_RS01230;Dbxref=Genbank:WP_162616781.1;Name=WP_162616781.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF012498.2;locus_tag=DDE57_RS01230;product=50S ribosomal protein L23;protein_id=WP_162616781.1;transl_table=11 NZ_CP029009.1 RefSeq gene 239626 240444 . + . ID=gene-DDE57_RS01235;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=DDE57_RS01235 NZ_CP029009.1 Protein Homology CDS 239626 240444 . + 0 ID=cds-WP_110473515.1;Parent=gene-DDE57_RS01235;Dbxref=Genbank:WP_110473515.1;Name=WP_110473515.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007839515.1;locus_tag=DDE57_RS01235;product=50S ribosomal protein L2;protein_id=WP_110473515.1;transl_table=11 NZ_CP029009.1 RefSeq gene 240454 240738 . + . ID=gene-DDE57_RS01240;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=DDE57_RS01240 NZ_CP029009.1 Protein Homology CDS 240454 240738 . + 0 ID=cds-WP_041520710.1;Parent=gene-DDE57_RS01240;Dbxref=Genbank:WP_041520710.1;Name=WP_041520710.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799504.1;locus_tag=DDE57_RS01240;product=30S ribosomal protein S19;protein_id=WP_041520710.1;transl_table=11 NZ_CP029009.1 RefSeq gene 240740 241123 . + . ID=gene-DDE57_RS01245;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=DDE57_RS01245 NZ_CP029009.1 Protein Homology CDS 240740 241123 . + 0 ID=cds-WP_110473516.1;Parent=gene-DDE57_RS01245;Dbxref=Genbank:WP_110473516.1;Name=WP_110473516.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315672.1;locus_tag=DDE57_RS01245;product=50S ribosomal protein L22;protein_id=WP_110473516.1;transl_table=11 NZ_CP029009.1 RefSeq gene 241126 241842 . + . ID=gene-DDE57_RS01250;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=DDE57_RS01250 NZ_CP029009.1 Protein Homology CDS 241126 241842 . + 0 ID=cds-WP_110473517.1;Parent=gene-DDE57_RS01250;Dbxref=Genbank:WP_110473517.1;Name=WP_110473517.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799506.1;locus_tag=DDE57_RS01250;product=30S ribosomal protein S3;protein_id=WP_110473517.1;transl_table=11 NZ_CP029009.1 RefSeq gene 241853 242263 . + . ID=gene-DDE57_RS01255;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=DDE57_RS01255 NZ_CP029009.1 Protein Homology CDS 241853 242263 . + 0 ID=cds-WP_015799507.1;Parent=gene-DDE57_RS01255;Dbxref=Genbank:WP_015799507.1;Name=WP_015799507.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315674.1;locus_tag=DDE57_RS01255;product=50S ribosomal protein L16;protein_id=WP_015799507.1;transl_table=11 NZ_CP029009.1 RefSeq gene 242256 242507 . + . ID=gene-DDE57_RS01260;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=DDE57_RS01260 NZ_CP029009.1 Protein Homology CDS 242256 242507 . + 0 ID=cds-WP_110473518.1;Parent=gene-DDE57_RS01260;Dbxref=Genbank:WP_110473518.1;Name=WP_110473518.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743743.1;locus_tag=DDE57_RS01260;product=30S ribosomal protein S17;protein_id=WP_110473518.1;transl_table=11 NZ_CP029009.1 RefSeq gene 242509 242877 . + . ID=gene-DDE57_RS01265;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=DDE57_RS01265 NZ_CP029009.1 Protein Homology CDS 242509 242877 . + 0 ID=cds-WP_110473519.1;Parent=gene-DDE57_RS01265;Dbxref=Genbank:WP_110473519.1;Name=WP_110473519.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743742.1;locus_tag=DDE57_RS01265;product=50S ribosomal protein L14;protein_id=WP_110473519.1;transl_table=11 NZ_CP029009.1 RefSeq gene 242874 243140 . + . ID=gene-DDE57_RS01270;Name=DDE57_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01270 NZ_CP029009.1 Protein Homology CDS 242874 243140 . + 0 ID=cds-WP_110473520.1;Parent=gene-DDE57_RS01270;Dbxref=Genbank:WP_110473520.1;Name=WP_110473520.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028446.2;locus_tag=DDE57_RS01270;product=hypothetical protein;protein_id=WP_110473520.1;transl_table=11 NZ_CP029009.1 RefSeq gene 243153 243707 . + . ID=gene-DDE57_RS01275;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=DDE57_RS01275 NZ_CP029009.1 Protein Homology CDS 243153 243707 . + 0 ID=cds-WP_110473521.1;Parent=gene-DDE57_RS01275;Dbxref=Genbank:WP_110473521.1;Name=WP_110473521.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799511.1;locus_tag=DDE57_RS01275;product=50S ribosomal protein L5;protein_id=WP_110473521.1;transl_table=11 NZ_CP029009.1 RefSeq gene 243713 243982 . + . ID=gene-DDE57_RS01280;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=DDE57_RS01280 NZ_CP029009.1 Protein Homology CDS 243713 243982 . + 0 ID=cds-WP_015799512.1;Parent=gene-DDE57_RS01280;Dbxref=Genbank:WP_015799512.1;Name=WP_015799512.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006738440.1;locus_tag=DDE57_RS01280;product=30S ribosomal protein S14;protein_id=WP_015799512.1;transl_table=11 NZ_CP029009.1 RefSeq gene 244006 244407 . + . ID=gene-DDE57_RS01285;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=DDE57_RS01285 NZ_CP029009.1 Protein Homology CDS 244006 244407 . + 0 ID=cds-WP_110473522.1;Parent=gene-DDE57_RS01285;Dbxref=Genbank:WP_110473522.1;Name=WP_110473522.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743739.1;locus_tag=DDE57_RS01285;product=30S ribosomal protein S8;protein_id=WP_110473522.1;transl_table=11 NZ_CP029009.1 RefSeq gene 244440 244988 . + . ID=gene-DDE57_RS01290;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=DDE57_RS01290 NZ_CP029009.1 Protein Homology CDS 244440 244988 . + 0 ID=cds-WP_110473523.1;Parent=gene-DDE57_RS01290;Dbxref=Genbank:WP_110473523.1;Name=WP_110473523.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013038631.1;locus_tag=DDE57_RS01290;product=50S ribosomal protein L6;protein_id=WP_110473523.1;transl_table=11 NZ_CP029009.1 RefSeq gene 244989 245306 . + . ID=gene-DDE57_RS01295;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=DDE57_RS01295 NZ_CP029009.1 Protein Homology CDS 244989 245306 . + 0 ID=cds-WP_110473524.1;Parent=gene-DDE57_RS01295;Dbxref=Genbank:WP_110473524.1;Name=WP_110473524.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743736.1;locus_tag=DDE57_RS01295;product=50S ribosomal protein L18;protein_id=WP_110473524.1;transl_table=11 NZ_CP029009.1 RefSeq gene 245312 245851 . + . ID=gene-DDE57_RS01300;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=DDE57_RS01300 NZ_CP029009.1 Protein Homology CDS 245312 245851 . + 0 ID=cds-WP_110473563.1;Parent=gene-DDE57_RS01300;Dbxref=Genbank:WP_110473563.1;Name=WP_110473563.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008613581.1;locus_tag=DDE57_RS01300;product=30S ribosomal protein S5;protein_id=WP_110473563.1;transl_table=11 NZ_CP029009.1 RefSeq gene 245859 246047 . + . ID=gene-DDE57_RS01305;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=DDE57_RS01305 NZ_CP029009.1 Protein Homology CDS 245859 246047 . + 0 ID=cds-WP_110473525.1;Parent=gene-DDE57_RS01305;Dbxref=Genbank:WP_110473525.1;Name=WP_110473525.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016197780.1;locus_tag=DDE57_RS01305;product=50S ribosomal protein L30;protein_id=WP_110473525.1;transl_table=11 NZ_CP029009.1 RefSeq gene 246034 246483 . + . ID=gene-DDE57_RS01310;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=DDE57_RS01310 NZ_CP029009.1 Protein Homology CDS 246034 246483 . + 0 ID=cds-WP_015799517.1;Parent=gene-DDE57_RS01310;Dbxref=Genbank:WP_015799517.1;Name=WP_015799517.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743734.1;locus_tag=DDE57_RS01310;product=50S ribosomal protein L15;protein_id=WP_015799517.1;transl_table=11 NZ_CP029009.1 RefSeq gene 246494 247765 . + . ID=gene-DDE57_RS01315;Name=DDE57_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01315 NZ_CP029009.1 Protein Homology CDS 246494 247765 . + 0 ID=cds-WP_110473526.1;Parent=gene-DDE57_RS01315;Dbxref=Genbank:WP_110473526.1;Name=WP_110473526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315685.1;locus_tag=DDE57_RS01315;product=preprotein translocase subunit SecY;protein_id=WP_110473526.1;transl_table=11 NZ_CP029009.1 RefSeq gene 247773 247988 . + . ID=gene-DDE57_RS01320;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=DDE57_RS01320 NZ_CP029009.1 Protein Homology CDS 247773 247988 . + 0 ID=cds-WP_041520724.1;Parent=gene-DDE57_RS01320;Dbxref=Genbank:WP_041520724.1;Name=WP_041520724.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009779202.1;locus_tag=DDE57_RS01320;product=translation initiation factor IF-1;protein_id=WP_041520724.1;transl_table=11 NZ_CP029009.1 RefSeq gene 248002 248118 . + . ID=gene-DDE57_RS01325;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=DDE57_RS01325 NZ_CP029009.1 Protein Homology CDS 248002 248118 . + 0 ID=cds-WP_015799519.1;Parent=gene-DDE57_RS01325;Dbxref=Genbank:WP_015799519.1;Name=WP_015799519.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmJ;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014790280.1;locus_tag=DDE57_RS01325;product=50S ribosomal protein L36;protein_id=WP_015799519.1;transl_table=11 NZ_CP029009.1 RefSeq gene 248123 248542 . + . ID=gene-DDE57_RS01330;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=DDE57_RS01330 NZ_CP029009.1 Protein Homology CDS 248123 248542 . + 0 ID=cds-WP_110473527.1;Parent=gene-DDE57_RS01330;Dbxref=Genbank:WP_110473527.1;Name=WP_110473527.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799520.1;locus_tag=DDE57_RS01330;product=30S ribosomal protein S13;protein_id=WP_110473527.1;transl_table=11 NZ_CP029009.1 RefSeq gene 248603 248983 . + . ID=gene-DDE57_RS01335;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=DDE57_RS01335 NZ_CP029009.1 Protein Homology CDS 248603 248983 . + 0 ID=cds-WP_110467406.1;Parent=gene-DDE57_RS01335;Dbxref=Genbank:WP_110467406.1;Name=WP_110467406.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014158815.1;locus_tag=DDE57_RS01335;product=30S ribosomal protein S11;protein_id=WP_110467406.1;transl_table=11 NZ_CP029009.1 RefSeq gene 249006 249677 . + . ID=gene-DDE57_RS01340;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=DDE57_RS01340 NZ_CP029009.1 Protein Homology CDS 249006 249677 . + 0 ID=cds-WP_110473564.1;Parent=gene-DDE57_RS01340;Dbxref=Genbank:WP_110473564.1;Name=WP_110473564.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019039511.1;locus_tag=DDE57_RS01340;product=30S ribosomal protein S4;protein_id=WP_110473564.1;transl_table=11 NZ_CP029009.1 RefSeq gene 249685 250761 . + . ID=gene-DDE57_RS01345;Name=DDE57_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01345 NZ_CP029009.1 Protein Homology CDS 249685 250761 . + 0 ID=cds-WP_110473528.1;Parent=gene-DDE57_RS01345;Dbxref=Genbank:WP_110473528.1;Name=WP_110473528.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799523.1;locus_tag=DDE57_RS01345;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_110473528.1;transl_table=11 NZ_CP029009.1 RefSeq gene 250758 251126 . + . ID=gene-DDE57_RS01350;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=DDE57_RS01350 NZ_CP029009.1 Protein Homology CDS 250758 251126 . + 0 ID=cds-WP_015799524.1;Parent=gene-DDE57_RS01350;Dbxref=Genbank:WP_015799524.1;Name=WP_015799524.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013315692.1;locus_tag=DDE57_RS01350;product=50S ribosomal protein L17;protein_id=WP_015799524.1;transl_table=11 NZ_CP029009.1 RefSeq gene 251123 251914 . - . ID=gene-DDE57_RS01355;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=DDE57_RS01355 NZ_CP029009.1 Protein Homology CDS 251123 251914 . - 0 ID=cds-WP_110473529.1;Parent=gene-DDE57_RS01355;Dbxref=Genbank:WP_110473529.1;Name=WP_110473529.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799525.1;locus_tag=DDE57_RS01355;product=diaminopimelate epimerase;protein_id=WP_110473529.1;transl_table=11 NZ_CP029009.1 RefSeq gene 251938 252849 . + . ID=gene-DDE57_RS01360;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=DDE57_RS01360 NZ_CP029009.1 Protein Homology CDS 251938 252849 . + 0 ID=cds-WP_110473530.1;Parent=gene-DDE57_RS01360;Dbxref=Genbank:WP_110473530.1;Name=WP_110473530.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743932.1;locus_tag=DDE57_RS01360;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_110473530.1;transl_table=11 NZ_CP029009.1 RefSeq gene 252839 253166 . - . ID=gene-DDE57_RS01365;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=DDE57_RS01365 NZ_CP029009.1 cmsearch RNase_P_RNA 252839 253166 . - . ID=rna-DDE57_RS01365;Parent=gene-DDE57_RS01365;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS01365;product=RNase P RNA component class A NZ_CP029009.1 cmsearch exon 252839 253166 . - . ID=exon-DDE57_RS01365-1;Parent=rna-DDE57_RS01365;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=DDE57_RS01365;product=RNase P RNA component class A NZ_CP029009.1 RefSeq gene 253189 254556 . - . ID=gene-DDE57_RS01370;Name=DDE57_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01370 NZ_CP029009.1 Protein Homology CDS 253189 254556 . - 0 ID=cds-WP_110473531.1;Parent=gene-DDE57_RS01370;Dbxref=Genbank:WP_110473531.1;Name=WP_110473531.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799526.1;locus_tag=DDE57_RS01370;product=aldehyde dehydrogenase family protein;protein_id=WP_110473531.1;transl_table=11 NZ_CP029009.1 RefSeq gene 254574 256202 . - . ID=gene-DDE57_RS01375;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=DDE57_RS01375 NZ_CP029009.1 Protein Homology CDS 254574 256202 . - 0 ID=cds-WP_110473532.1;Parent=gene-DDE57_RS01375;Dbxref=Genbank:WP_110473532.1;Name=WP_110473532.1;Ontology_term=GO:0006298,GO:0016887;gbkey=CDS;gene=mutL;go_function=ATP hydrolysis activity|0016887||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799527.1;locus_tag=DDE57_RS01375;product=DNA mismatch repair endonuclease MutL;protein_id=WP_110473532.1;transl_table=11 NZ_CP029009.1 RefSeq gene 256238 257572 . + . ID=gene-DDE57_RS01380;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=DDE57_RS01380 NZ_CP029009.1 Protein Homology CDS 256238 257572 . + 0 ID=cds-WP_110473565.1;Parent=gene-DDE57_RS01380;Dbxref=Genbank:WP_110473565.1;Name=WP_110473565.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799528.1;locus_tag=DDE57_RS01380;product=argininosuccinate lyase;protein_id=WP_110473565.1;transl_table=11 NZ_CP029009.1 RefSeq gene 257583 259082 . - . ID=gene-DDE57_RS01385;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=DDE57_RS01385 NZ_CP029009.1 Protein Homology CDS 257583 259082 . - 0 ID=cds-WP_110473533.1;Parent=gene-DDE57_RS01385;Dbxref=Genbank:WP_110473533.1;Name=WP_110473533.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799529.1;locus_tag=DDE57_RS01385;product=lysine--tRNA ligase;protein_id=WP_110473533.1;transl_table=11 NZ_CP029009.1 RefSeq gene 259124 259197 . - . ID=gene-DDE57_RS01390;Name=DDE57_RS01390;gbkey=Gene;gene_biotype=tRNA;locus_tag=DDE57_RS01390 NZ_CP029009.1 tRNAscan-SE tRNA 259124 259197 . - . ID=rna-DDE57_RS01390;Parent=gene-DDE57_RS01390;anticodon=(pos:complement(259161..259163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS01390;product=tRNA-Arg NZ_CP029009.1 tRNAscan-SE exon 259124 259197 . - . ID=exon-DDE57_RS01390-1;Parent=rna-DDE57_RS01390;anticodon=(pos:complement(259161..259163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=DDE57_RS01390;product=tRNA-Arg NZ_CP029009.1 RefSeq gene 259219 260220 . + . ID=gene-DDE57_RS01395;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=DDE57_RS01395 NZ_CP029009.1 Protein Homology CDS 259219 260220 . + 0 ID=cds-WP_110473534.1;Parent=gene-DDE57_RS01395;Dbxref=Genbank:WP_110473534.1;Name=WP_110473534.1;Ontology_term=GO:0006086,GO:0004739,GO:0045250;gbkey=CDS;gene=pdhA;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799530.1;locus_tag=DDE57_RS01395;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WP_110473534.1;transl_table=11 NZ_CP029009.1 RefSeq gene 260232 261353 . + . ID=gene-DDE57_RS01400;Name=DDE57_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01400 NZ_CP029009.1 Protein Homology CDS 260232 261353 . + 0 ID=cds-WP_110473535.1;Parent=gene-DDE57_RS01400;Dbxref=Genbank:WP_110473535.1;Name=WP_110473535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799531.1;locus_tag=DDE57_RS01400;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_110473535.1;transl_table=11 NZ_CP029009.1 RefSeq gene 261345 262067 . - . ID=gene-DDE57_RS01405;Name=DDE57_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01405 NZ_CP029009.1 Protein Homology CDS 261345 262067 . - 0 ID=cds-WP_110473536.1;Parent=gene-DDE57_RS01405;Dbxref=Genbank:WP_110473536.1;Name=WP_110473536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799532.1;locus_tag=DDE57_RS01405;product=DUF475 domain-containing protein;protein_id=WP_110473536.1;transl_table=11 NZ_CP029009.1 RefSeq gene 262108 263130 . + . ID=gene-DDE57_RS01410;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=DDE57_RS01410 NZ_CP029009.1 Protein Homology CDS 262108 263130 . + 0 ID=cds-WP_110473537.1;Parent=gene-DDE57_RS01410;Dbxref=Genbank:WP_110473537.1;Name=WP_110473537.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799533.1;locus_tag=DDE57_RS01410;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_110473537.1;transl_table=11 NZ_CP029009.1 RefSeq gene 263127 263546 . - . ID=gene-DDE57_RS01415;Name=DDE57_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01415 NZ_CP029009.1 Protein Homology CDS 263127 263546 . - 0 ID=cds-WP_204352375.1;Parent=gene-DDE57_RS01415;Dbxref=Genbank:WP_204352375.1;Name=WP_204352375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799534.1;locus_tag=DDE57_RS01415;product=type I restriction enzyme HsdR N-terminal domain-containing protein;protein_id=WP_204352375.1;transl_table=11 NZ_CP029009.1 RefSeq gene 263551 264522 . + . ID=gene-DDE57_RS01420;Name=DDE57_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01420 NZ_CP029009.1 Protein Homology CDS 263551 264522 . + 0 ID=cds-WP_110473538.1;Parent=gene-DDE57_RS01420;Dbxref=Genbank:WP_110473538.1;Name=WP_110473538.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017911.2;locus_tag=DDE57_RS01420;product=hypothetical protein;protein_id=WP_110473538.1;transl_table=11 NZ_CP029009.1 RefSeq gene 264527 265462 . + . ID=gene-DDE57_RS01425;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=DDE57_RS01425 NZ_CP029009.1 Protein Homology CDS 264527 265462 . + 0 ID=cds-WP_110473539.1;Parent=gene-DDE57_RS01425;Dbxref=Genbank:WP_110473539.1;Name=WP_110473539.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799536.1;locus_tag=DDE57_RS01425;product=thioredoxin-disulfide reductase;protein_id=WP_110473539.1;transl_table=11 NZ_CP029009.1 RefSeq gene 265459 266205 . + . ID=gene-DDE57_RS01430;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=DDE57_RS01430 NZ_CP029009.1 Protein Homology CDS 265459 266205 . + 0 ID=cds-WP_110473540.1;Parent=gene-DDE57_RS01430;Dbxref=Genbank:WP_110473540.1;Name=WP_110473540.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726582.1;locus_tag=DDE57_RS01430;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_110473540.1;transl_table=11 NZ_CP029009.1 RefSeq gene 266202 267197 . - . ID=gene-DDE57_RS01435;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=DDE57_RS01435 NZ_CP029009.1 Protein Homology CDS 266202 267197 . - 0 ID=cds-WP_110473541.1;Parent=gene-DDE57_RS01435;Dbxref=Genbank:WP_110473541.1;Name=WP_110473541.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220899.1;locus_tag=DDE57_RS01435;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_110473541.1;transl_table=11 NZ_CP029009.1 RefSeq gene 267228 268487 . - . ID=gene-DDE57_RS01440;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=DDE57_RS01440 NZ_CP029009.1 Protein Homology CDS 267228 268487 . - 0 ID=cds-WP_015799539.1;Parent=gene-DDE57_RS01440;Dbxref=Genbank:WP_015799539.1;Name=WP_015799539.1;gbkey=CDS;gene=ilvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012220898.1;locus_tag=DDE57_RS01440;product=threonine ammonia-lyase;protein_id=WP_015799539.1;transl_table=11 NZ_CP029009.1 RefSeq gene 268548 269582 . - . ID=gene-DDE57_RS01445;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=DDE57_RS01445 NZ_CP029009.1 Protein Homology CDS 268548 269582 . - 0 ID=cds-WP_015799540.1;Parent=gene-DDE57_RS01445;Dbxref=Genbank:WP_015799540.1;Name=WP_015799540.1;Ontology_term=GO:0009097,GO:0009099,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743785.1;locus_tag=DDE57_RS01445;product=ketol-acid reductoisomerase;protein_id=WP_015799540.1;transl_table=11 NZ_CP029009.1 RefSeq gene 269591 269875 . - . ID=gene-DDE57_RS01450;Name=DDE57_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DDE57_RS01450 NZ_CP029009.1 Protein Homology CDS 269591 269875 . - 0 ID=cds-WP_110473542.1;Parent=gene-DDE57_RS01450;Dbxref=Genbank:WP_110473542.1;Name=WP_110473542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799541.1;locus_tag=DDE57_RS01450;product=acetolactate synthase;protein_id=WP_110473542.1;transl_table=11 NZ_CP029009.1 RefSeq gene 269856 271553 . - . ID=gene-DDE57_RS01455;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=DDE57_RS01455 NZ_CP029009.1 Protein Homology CDS 269856 271553 . - 0 ID=cds-WP_110473543.1;Parent=gene-DDE57_RS01455;Dbxref=Genbank:WP_110473543.1;Name=WP_110473543.1;Ontology_term=GO:0009097,GO:0009099,GO:0003984,GO:0005948;gbkey=CDS;gene=ilvB;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase activity|0003984||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799542.1;locus_tag=DDE57_RS01455;product=biosynthetic-type acetolactate synthase large subunit;protein_id=WP_110473543.1;transl_table=11 NZ_CP029009.1 RefSeq pseudogene 271556 273216 . - . ID=gene-DDE57_RS01460;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=pseudogene;locus_tag=DDE57_RS01460;pseudo=true NZ_CP029009.1 Protein Homology CDS 271556 273216 . - 0 ID=cds-DDE57_RS01460;Parent=gene-DDE57_RS01460;Note=frameshifted;Ontology_term=GO:0009097,GO:0009099,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015799543.1;locus_tag=DDE57_RS01460;product=dihydroxy-acid dehydratase;pseudo=true;transl_table=11 ###